Oceanispirochaeta crateris strain K2 chromosome, complete genome.
Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Spirochaetaceae; Oceanispirochaeta.
Complete Genome Sequence and Methylome Analysis of free living Spirochaetas
Submitted (14-FEB-2019) Genome Biology, NEB, 240 County Rd, Ipswich, MA 01938, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP036150.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 08-FEB-2019\nAssembly Method :: HGAP v. 2.3.0\nAssembly Name :: Oceanispirochaeta crateria K2 _HGAP3_2\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 239.8x\nSequencing Technology :: PacBio RS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/05/2023 04:17:58\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,636\nCDSs (total) :: 3,564\nGenes (coding) :: 3,542\nCDSs (with protein) :: 3,542\nGenes (RNA) :: 72\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 56\nncRNAs :: 4\nPseudo Genes (total) :: 22\nCDSs (without protein) :: 22\nPseudo Genes (ambiguous residues) :: 0 of 22\nPseudo Genes (frameshifted) :: 12 of 22\nPseudo Genes (incomplete) :: 9 of 22\nPseudo Genes (internal stop) :: 7 of 22\nPseudo Genes (multiple problems) :: 5 of 22\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type strain of Oceanispirochaeta crateris
COORDINATES: protein motif:HMM:NF012235.2
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
sugar ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF014684.2
GO:0005886 - plasma membrane [Evidence IEA]
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: protein motif:HMM:NF012742.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0000976 - transcription cis-regulatory region binding [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]; GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
LacI family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:TIGR02810.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit
COORDINATES: protein motif:HMM:NF028222.2
alcohol dehydrogenase catalytic domain-containing protein
COORDINATES: protein motif:HMM:NF005589.0
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018525050.1
GO:0018580 - nitronate monooxygenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014624080.1
COORDINATES: protein motif:HMM:TIGR01182.1
GO:0008675 - 2-dehydro-3-deoxy-phosphogluconate aldolase activity [Evidence IEA]; GO:0008700 - 4-hydroxy-2-oxoglutarate aldolase activity [Evidence IEA]
GO:0009255 - Entner-Doudoroff pathway through 6-phosphogluconate [Evidence IEA]; GO:0009084 - glutamine family amino acid biosynthetic process [Evidence IEA]
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_018525652.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0048029 - monosaccharide binding [Evidence IEA]
GO:0005996 - monosaccharide metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012913.2
COORDINATES: protein motif:HMM:NF006055.0
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: protein motif:HMM:NF013134.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013253985.1
molybdopterin-dependent oxidoreductase Mo/Fe-S-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015712781.1
COORDINATES: similar to AA sequence:RefSeq:WP_018526006.1
COORDINATES: similar to AA sequence:RefSeq:WP_014271495.1
COORDINATES: similar to AA sequence:RefSeq:WP_014271494.1
COORDINATES: similar to AA sequence:RefSeq:WP_014271493.1
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF027890.2
efflux RND transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF014385.2
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012655.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014624368.1
GO:0045454 - cell redox homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013253811.1
COORDINATES: protein motif:HMM:NF019194.2
COORDINATES: protein motif:HMM:NF013225.2
carboxyl transferase domain-containing protein
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: protein motif:HMM:NF025698.2
COORDINATES: similar to AA sequence:RefSeq:WP_010261804.1
COORDINATES: similar to AA sequence:RefSeq:WP_014456036.1
COORDINATES: protein motif:HMM:NF012301.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013757276.1
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012245.2
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020612884.1
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: protein motif:HMM:NF014244.2
COORDINATES: protein motif:HMM:NF016836.2
COORDINATES: protein motif:HMM:NF024983.2
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: protein motif:HMM:NF012894.2
gliding motility-associated C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014455778.1
GO:0003994 - aconitate hydratase activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01816.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
succinate dehydrogenase flavoprotein subunit
COORDINATES: protein motif:HMM:NF004616.0
GO:0046872 - metal ion binding [Evidence IEA]; GO:0008177 - succinate dehydrogenase (ubiquinone) activity [Evidence IEA]
succinate dehydrogenase iron-sulfur subunit
COORDINATES: protein motif:HMM:NF001913.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
ADP-forming succinate--CoA ligase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_018287377.1
COORDINATES: protein motif:HMM:NF008907.0
GO:0004591 - oxoglutarate dehydrogenase (succinyl-transferring) activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
2-oxoglutarate dehydrogenase E1 component
COORDINATES: protein motif:HMM:TIGR01347.1
GO:0045252 - oxoglutarate dehydrogenase complex [Evidence IEA]
GO:0004149 - dihydrolipoyllysine-residue succinyltransferase activity [Evidence IEA]
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase
COORDINATES: protein motif:HMM:TIGR01800.1
COORDINATES: similar to AA sequence:RefSeq:WP_014624116.1
COORDINATES: similar to AA sequence:RefSeq:WP_013313114.1
GO:0008783 - agmatinase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013313113.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]
GO:0008216 - spermidine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014454747.1
saccharopine dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020614404.1
GO:0008792 - arginine decarboxylase activity [Evidence IEA]
GO:0006527 - arginine catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012492.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013253498.1
COORDINATES: protein motif:HMM:TIGR01730.1
GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: similar to AA sequence:RefSeq:WP_013254897.1
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: protein motif:HMM:NF024247.2
COORDINATES: protein motif:HMM:NF013481.2
aldehyde ferredoxin oxidoreductase family protein
COORDINATES: protein motif:HMM:NF012678.2
COORDINATES: protein motif:HMM:NF013183.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]
MogA/MoaB family molybdenum cofactor biosynthesis protein
COORDINATES: similar to AA sequence:RefSeq:WP_006188042.1
COORDINATES: similar to AA sequence:RefSeq:WP_013254220.1
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
cyclic pyranopterin monophosphate synthase MoaC
COORDINATES: protein motif:HMM:NF015983.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF015418.2
COORDINATES: protein motif:HMM:NF038017.1
COORDINATES: protein motif:HMM:NF024921.2
substrate-binding domain-containing protein
COORDINATES: nucleotide motif:Rfam:14.4:RF01055
molybdenum cofactor riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF014094.2
COORDINATES: protein motif:HMM:NF013647.2
GO:0033179 - proton-transporting V-type ATPase, V0 domain [Evidence IEA]
GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]
V-type ATPase 116kDa subunit family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020614154.1
COORDINATES: similar to AA sequence:RefSeq:WP_013255667.1
COORDINATES: protein motif:HMM:NF014093.2
GO:0033178 - proton-transporting two-sector ATPase complex, catalytic domain [Evidence IEA]
GO:0046961 - proton-transporting ATPase activity, rotational mechanism [Evidence IEA]
V-type ATP synthase subunit E family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013739378.1
COORDINATES: similar to AA sequence:RefSeq:WP_013606825.1
COORDINATES: similar to AA sequence:RefSeq:WP_013255663.1
COORDINATES: similar to AA sequence:RefSeq:WP_020614148.1
GO:0032559 - adenyl ribonucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020614147.1
GO:1902495 - transmembrane transporter complex [Evidence IEA]
GO:0016301 - kinase activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020611744.1
COORDINATES: protein motif:HMM:NF020940.2
COORDINATES: protein motif:HMM:NF012876.2
COORDINATES: protein motif:HMM:NF013866.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012241.2
COORDINATES: similar to AA sequence:RefSeq:WP_013314513.1
COORDINATES: similar to AA sequence:RefSeq:WP_020612658.1
COORDINATES: similar to AA sequence:RefSeq:WP_013256681.1
COORDINATES: similar to AA sequence:RefSeq:WP_014268806.1
GO:0009055 - electron transfer activity [Evidence IEA]
electron transfer flavoprotein subunit beta/FixA family protein
COORDINATES: protein motif:HMM:NF014910.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
FAD-linked oxidase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF036525.2
COORDINATES: protein motif:HMM:NF019607.2
GO:0016901 - oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor [Evidence IEA]; GO:0070968 - pyrroloquinoline quinone binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: protein motif:HMM:NF014620.2
NifB/NifX family molybdenum-iron cluster-binding protein
COORDINATES: protein motif:HMM:NF014101.2
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: protein motif:HMM:NF014542.2
COORDINATES: similar to AA sequence:RefSeq:WP_014269919.1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF024760.2
GO:0070007 - glutamic-type endopeptidase activity [Evidence IEA]
PrsW family glutamic-type intramembrane protease
COORDINATES: protein motif:HMM:TIGR01141.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025030.2
COORDINATES: similar to AA sequence:RefSeq:WP_013255847.1
putative sulfate exporter family transporter
COORDINATES: protein motif:HMM:NF015431.2
GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020614419.1
COORDINATES: protein motif:HMM:NF013080.2
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013247.2
COORDINATES: protein motif:HMM:NF014663.2
COORDINATES: protein motif:HMM:NF015691.2
COORDINATES: protein motif:HMM:NF014712.2
COORDINATES: protein motif:HMM:NF025694.2
COORDINATES: similar to AA sequence:RefSeq:WP_015711243.1
COORDINATES: protein motif:HMM:NF019315.2
COORDINATES: protein motif:HMM:NF024988.2
COORDINATES: protein motif:HMM:NF012869.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012673.2
GO:0008934 - inositol monophosphate 1-phosphatase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006020 - inositol metabolic process [Evidence IEA]; GO:0046855 - inositol phosphate dephosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF021348.2
COORDINATES: protein motif:HMM:NF017207.2
GO:0008168 - methyltransferase activity [Evidence IEA]
monomethylamine:corrinoid methyltransferase
COORDINATES: protein motif:HMM:NF018076.2
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014573.2
GO:0010181 - FMN binding [Evidence IEA]; GO:0050136 - NADH dehydrogenase (quinone) activity [Evidence IEA]; GO:0008753 - NADPH dehydrogenase (quinone) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024854.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012335.2
zinc-dependent alcohol dehydrogenase family protein
COORDINATES: protein motif:HMM:TIGR03315.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
putative selenate reductase subunit YgfK
COORDINATES: protein motif:HMM:NF014420.2
energy-coupling factor transporter transmembrane component T
COORDINATES: protein motif:HMM:NF024799.2
COORDINATES: protein motif:HMM:NF040906.2
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013757700.1
COORDINATES: similar to AA sequence:RefSeq:WP_013967519.1
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014269838.1
COORDINATES: protein motif:HMM:NF036294.2
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: similar to AA sequence:RefSeq:WP_013968171.1
COORDINATES: similar to AA sequence:RefSeq:WP_013968170.1
COORDINATES: protein motif:HMM:NF015956.2
GO:0046914 - transition metal ion binding [Evidence IEA]
GO:0055072 - iron ion homeostasis [Evidence IEA]; GO:0006811 - monoatomic ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020611229.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013232.2
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
COORDINATES: similar to AA sequence:RefSeq:WP_002696113.1
S-adenosyl-l-methionine hydroxide adenosyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013739991.1
COORDINATES: similar to AA sequence:RefSeq:WP_016526208.1
COORDINATES: similar to AA sequence:RefSeq:WP_016526209.1
COORDINATES: similar to AA sequence:RefSeq:WP_016292225.1
ECF-type riboflavin transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF024808.2
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016519768.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016525732.1
COORDINATES: similar to AA sequence:RefSeq:WP_013314311.1
GO:0008801 - beta-phosphoglucomutase activity [Evidence IEA]
GO:0046352 - disaccharide catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012356.2
COORDINATES: similar to AA sequence:RefSeq:WP_010254780.1
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF013704.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0009307 - DNA restriction-modification system [Evidence IEA]
COORDINATES: protein motif:HMM:NF025736.2
COORDINATES: similar to AA sequence:RefSeq:WP_015947363.1
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024214.2
GO:0005525 - GTP binding [Evidence IEA]; GO:0061603 - molybdenum cofactor guanylyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00129.1
GO:0009061 - anaerobic respiration [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
formate dehydrogenase accessory sulfurtransferase FdhD
COORDINATES: similar to AA sequence:RefSeq:WP_013253112.1
COORDINATES: similar to AA sequence:RefSeq:WP_013253111.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_014269496.1
GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01475.1
COORDINATES: protein motif:HMM:NF004685.0
COORDINATES: protein motif:HMM:NF012738.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024644.2
4Fe-4S dicluster domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013253738.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014671.2
GO:0016783 - sulfurtransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00945.1
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
COORDINATES: protein motif:HMM:NF014470.2
twin-arginine translocase TatA/TatE family subunit
COORDINATES: protein motif:HMM:TIGR00614.1
GO:0004386 - helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF012200.0
choice-of-anchor D domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018527331.1
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: similar to AA sequence:RefSeq:WP_010257628.1
GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF018944.2
COORDINATES: protein motif:HMM:TIGR04105.1
COORDINATES: protein motif:HMM:NF015588.2
COORDINATES: similar to AA sequence:RefSeq:WP_014624376.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018525683.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: protein motif:HMM:TIGR00186.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: protein motif:HMM:TIGR04350.1
GO:0004121 - cystathionine beta-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015509.2
COORDINATES: similar to AA sequence:RefSeq:WP_016524830.1
GO:0003852 - 2-isopropylmalate synthase activity [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014269708.1
GO:0003862 - 3-isopropylmalate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013314750.1
GO:0016624 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016524565.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013255748.1
COORDINATES: protein motif:HMM:NF013700.2
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013255746.1
COORDINATES: protein motif:HMM:NF015822.2
COORDINATES: similar to AA sequence:RefSeq:WP_015710157.1
regulatory iron-sulfur-containing complex subunit RicT
COORDINATES: similar to AA sequence:RefSeq:WP_014342390.1
COORDINATES: similar to AA sequence:RefSeq:WP_013255743.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014455977.1
GO:0030261 - chromosome condensation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013314766.1
COORDINATES: similar to AA sequence:RefSeq:WP_013255738.1
COORDINATES: protein motif:HMM:NF014517.2
COORDINATES: similar to AA sequence:RefSeq:WP_014455971.1
GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002706471.1
COORDINATES: protein motif:HMM:TIGR00131.1
GO:0004335 - galactokinase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00087.1
GO:0008254 - 3'-nucleotidase activity [Evidence IEA]; GO:0008253 - 5'-nucleotidase activity [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]
COORDINATES: protein motif:HMM:NF024579.2
COORDINATES: protein motif:HMM:NF013595.2
COORDINATES: similar to AA sequence:RefSeq:WP_015711688.1
COORDINATES: similar to AA sequence:RefSeq:WP_015711689.1
GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]
GO:0043335 - protein unfolding [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpA
COORDINATES: similar to AA sequence:RefSeq:WP_020614256.1
GO:0008914 - leucyltransferase activity [Evidence IEA]
leucyl/phenylalanyl-tRNA--protein transferase
COORDINATES: protein motif:HMM:TIGR00765.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015710590.1
COORDINATES: protein motif:HMM:NF024970.2
COORDINATES: protein motif:HMM:NF027590.2
COORDINATES: similar to AA sequence:RefSeq:WP_002702702.1
GO:0070191 - methionine-R-sulfoxide reductase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014625545.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: protein motif:HMM:NF013015.2
COORDINATES: protein motif:HMM:NF012920.2
translesion error-prone DNA polymerase V autoproteolytic subunit
COORDINATES: protein motif:HMM:TIGR00797.1
GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012403.2
COORDINATES: protein motif:HMM:NF014566.2
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0071586 - CAAX-box protein processing [Evidence IEA]
CPBP family intramembrane metalloprotease
type II CAAX endopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013605843.1
COORDINATES: protein motif:HMM:NF014717.2
COORDINATES: similar to AA sequence:RefSeq:WP_013607627.1
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF012422.2
COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1
GO:0004803 - transposase activity [Evidence IEA]
7TM diverse intracellular signaling domain-containing protein
COORDINATES: protein motif:HMM:NF019736.2
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF012703.2
COORDINATES: protein motif:HMM:NF013335.2
COORDINATES: protein motif:HMM:TIGR00266.1
COORDINATES: protein motif:HMM:NF024824.2
COORDINATES: similar to AA sequence:RefSeq:WP_010257449.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF020123.2
COORDINATES: protein motif:HMM:NF013256.2
GO:0004559 - alpha-mannosidase activity [Evidence IEA]
GO:0006013 - mannose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020611706.1
GO:0016829 - lyase activity [Evidence IEA]
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013608355.1
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
COORDINATES: protein motif:HMM:NF016200.2
COORDINATES: protein motif:HMM:NF015445.2
sialic acid TRAP transporter substrate-binding protein SiaP
COORDINATES: protein motif:HMM:TIGR03417.1
COORDINATES: protein motif:HMM:NF024929.2
COORDINATES: protein motif:HMM:NF016262.2
COORDINATES: similar to AA sequence:RefSeq:WP_020614003.1
COORDINATES: similar to AA sequence:RefSeq:WP_013607250.1
COORDINATES: protein motif:HMM:TIGR00835.1
GO:0005283 - amino acid:sodium symporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA]
GO:0006865 - amino acid transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014624289.1
GO:0042597 - periplasmic space [Evidence IEA]
tripartite tricarboxylate transporter substrate binding protein
COORDINATES: protein motif:HMM:NF018979.2
tripartite tricarboxylate transporter TctB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014624291.1
tripartite tricarboxylate transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_013313418.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: protein motif:HMM:NF019349.2
FadR/GntR family transcriptional regulator
COORDINATES: protein motif:HMM:NF019350.2
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014912.2
COORDINATES: similar to AA sequence:RefSeq:WP_020612661.1
COORDINATES: similar to AA sequence:RefSeq:WP_013969653.1
GO:0004089 - carbonate dehydratase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013252956.1
COORDINATES: protein motif:HMM:NF021449.2
DUF2161 family putative PD-(D/E)XK-type phosphodiesterase
COORDINATES: protein motif:HMM:NF013702.2
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014269956.1
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: protein motif:HMM:NF012514.2
GO:0005829 - cytosol [Evidence IEA]; GO:0005777 - peroxisome [Evidence IEA]
GO:0035539 - 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity [Evidence IEA]; GO:0008413 - 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity [Evidence IEA]; GO:0003986 - acetyl-CoA hydrolase activity [Evidence IEA]; GO:0010945 - CoA pyrophosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]
GO:0015938 - coenzyme A catabolic process [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009132 - nucleoside diphosphate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03707.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0008976 - polyphosphate kinase activity [Evidence IEA]
GO:0006793 - phosphorus metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014177.2
GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0032775 - DNA methylation on adenine [Evidence IEA]
COORDINATES: protein motif:HMM:NF016443.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0009036 - type II site-specific deoxyribonuclease activity [Evidence IEA]
DpnII family type II restriction endonuclease
COORDINATES: protein motif:HMM:NF008633.0
COORDINATES: protein motif:HMM:NF012436.2
COORDINATES: similar to AA sequence:RefSeq:WP_013606721.1
COORDINATES: similar to AA sequence:RefSeq:WP_013255848.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008887 - glycerate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: similar to AA sequence:RefSeq:WP_015709922.1
COORDINATES: protein motif:HMM:NF002969.0
COORDINATES: similar to AA sequence:RefSeq:WP_002706604.1
COORDINATES: similar to AA sequence:RefSeq:WP_015713130.1
GO:0008880 - glucuronate isomerase activity [Evidence IEA]
GO:0006064 - glucuronate catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013594.2
COORDINATES: similar to AA sequence:RefSeq:WP_013255951.1
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_013255950.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: protein motif:HMM:NF007807.0
COORDINATES: protein motif:HMM:NF040898.1
LDCC motif putative metal-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_020614634.1
GO:0005375 - copper ion transmembrane transporter activity [Evidence IEA]; GO:0043682 - P-type divalent copper transporter activity [Evidence IEA]
GO:0006825 - copper ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF021378.2
COORDINATES: protein motif:HMM:TIGR01613.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015707991.1
COORDINATES: similar to AA sequence:RefSeq:WP_015710093.1
COORDINATES: protein motif:HMM:NF025539.2
COORDINATES: protein motif:HMM:NF013677.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: protein motif:HMM:NF024673.2
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012870.2
GO:0015074 - DNA integration [Evidence IEA]
DDE-type integrase/transposase/recombinase
COORDINATES: similar to AA sequence:RefSeq:WP_013256580.1
COORDINATES: protein motif:HMM:NF033516.0
COORDINATES: protein motif:HMM:NF025063.2
integrase core domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015708140.1
GO:0044423 - virion component [Evidence IEA]
GO:0019068 - virion assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015708141.1
COORDINATES: similar to AA sequence:RefSeq:WP_015708143.1
COORDINATES: protein motif:HMM:NF016362.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015708082.1
COORDINATES: protein motif:HMM:TIGR01764.1
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF015210.2
COORDINATES: protein motif:HMM:NF037890.2
MAE_28990/MAE_18760 family HEPN-like nuclease
COORDINATES: protein motif:HMM:NF037095.2
LA2681 family HEPN domain-containing protein
COORDINATES: protein motif:HMM:NF025612.2
COORDINATES: similar to AA sequence:RefSeq:WP_013253033.1
COORDINATES: protein motif:HMM:NF019844.2
GO:0070064 - proline-rich region binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014691.2
COORDINATES: similar to AA sequence:RefSeq:WP_002670205.1
type II toxin-antitoxin system VapB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_002670207.1
COORDINATES: similar to AA sequence:RefSeq:WP_013254778.1
GO:0110001 - toxin-antitoxin complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013254779.1
COORDINATES: protein motif:HMM:NF017757.2
COORDINATES: similar to AA sequence:RefSeq:WP_016521000.1
COORDINATES: similar to AA sequence:RefSeq:WP_013970041.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016524649.1
COORDINATES: similar to AA sequence:RefSeq:WP_010261900.1
COORDINATES: similar to AA sequence:RefSeq:WP_013253580.1
COORDINATES: similar to AA sequence:RefSeq:WP_020612028.1
COORDINATES: similar to AA sequence:RefSeq:WP_014269225.1
COORDINATES: protein motif:HMM:NF015513.2
COORDINATES: similar to AA sequence:RefSeq:WP_013606745.1
TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015708770.1
COORDINATES: similar to AA sequence:RefSeq:WP_016521355.1
COORDINATES: protein motif:HMM:TIGR00254.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014672.2
COORDINATES: similar to AA sequence:RefSeq:WP_013969871.1
COORDINATES: protein motif:HMM:NF013180.2
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00549.1
GO:0004496 - mevalonate kinase activity [Evidence IEA]
GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway [Evidence IEA]; GO:0016126 - sterol biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012669.2
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: similar to AA sequence:RefSeq:WP_018525566.1
C4-dicarboxylate TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018525567.1
COORDINATES: similar to AA sequence:RefSeq:WP_018525568.1
COORDINATES: protein motif:HMM:NF015763.2
COORDINATES: protein motif:HMM:NF017985.2
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: protein motif:HMM:NF024957.2
COORDINATES: protein motif:HMM:NF024484.2
COORDINATES: similar to AA sequence:RefSeq:WP_012727522.1
GO:0016990 - arginine deiminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013256514.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010260979.1
GO:0008784 - alanine racemase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013109.2
GO:0015116 - sulfate transmembrane transporter activity [Evidence IEA]
GO:0008272 - sulfate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013313587.1
COORDINATES: protein motif:HMM:NF012579.2
COORDINATES: protein motif:HMM:NF013188.2
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: similar to AA sequence:RefSeq:WP_020610766.1
COORDINATES: protein motif:HMM:NF014724.2
COORDINATES: similar to AA sequence:RefSeq:WP_014270836.1
COORDINATES: similar to AA sequence:RefSeq:WP_014270835.1
COORDINATES: similar to AA sequence:RefSeq:WP_013608427.1
COORDINATES: similar to AA sequence:RefSeq:WP_014270833.1
COORDINATES: similar to AA sequence:RefSeq:WP_014270832.1
COORDINATES: similar to AA sequence:RefSeq:WP_014270831.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0042953 - lipoprotein transport [Evidence IEA]
outer membrane lipoprotein-sorting protein
COORDINATES: protein motif:HMM:NF012607.2
COORDINATES: protein motif:HMM:NF014664.2
GO:0051920 - peroxiredoxin activity [Evidence IEA]
carboxymuconolactone decarboxylase family protein
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:NF024925.2
COORDINATES: protein motif:HMM:NF024772.2
GO:0140359 - ABC-type transporter activity [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024629.2
COORDINATES: protein motif:HMM:NF012790.2
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018525704.1
COORDINATES: similar to AA sequence:RefSeq:WP_013253094.1
YeeE/YedE thiosulfate transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013253093.1
COORDINATES: similar to AA sequence:RefSeq:WP_018525701.1
COORDINATES: protein motif:HMM:NF014850.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
glycoside hydrolase family 2 TIM barrel-domain containing protein
COORDINATES: protein motif:HMM:NF024242.2
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF021252.2
COORDINATES: similar to AA sequence:RefSeq:WP_002671951.1
COORDINATES: protein motif:HMM:NF016424.2
COORDINATES: protein motif:HMM:NF014471.2
GO:0015109 - chromate transmembrane transporter activity [Evidence IEA]
GO:0015703 - chromate transport [Evidence IEA]
nuclear transport factor 2 family protein
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: protein motif:HMM:NF008738.0
GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014270722.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013254189.1
COORDINATES: protein motif:HMM:NF012568.2
COORDINATES: protein motif:HMM:NF014165.2
GO:0004181 - metallocarboxypeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00560.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: protein motif:HMM:NF014818.2
glyceraldehyde 3-phosphate dehydrogenase NAD-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012314.2
COORDINATES: similar to AA sequence:RefSeq:WP_013255594.1
sulfite exporter TauE/SafE family protein
COORDINATES: protein motif:HMM:NF013618.2
LysM peptidoglycan-binding domain-containing protein
COORDINATES: protein motif:HMM:NF024572.2
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014342.2
COORDINATES: protein motif:HMM:TIGR01484.1
COORDINATES: protein motif:HMM:NF013231.2
MarR family winged helix-turn-helix transcriptional regulator
GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00507.1
COORDINATES: protein motif:HMM:NF001567.0
GO:0004047 - aminomethyltransferase activity [Evidence IEA]
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
glycine cleavage system aminomethyltransferase GcvT
COORDINATES: protein motif:HMM:TIGR00527.1
COORDINATES: similar to AA sequence:RefSeq:WP_013969750.1
GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0006546 - glycine catabolic process [Evidence IEA]
aminomethyl-transferring glycine dehydrogenase subunit GcvPA
COORDINATES: similar to AA sequence:RefSeq:WP_013969751.1
aminomethyl-transferring glycine dehydrogenase subunit GcvPB
COORDINATES: similar to AA sequence:RefSeq:WP_002701029.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009104766.1
COORDINATES: similar to AA sequence:RefSeq:WP_010255737.1
COORDINATES: similar to AA sequence:RefSeq:WP_015711898.1
COORDINATES: similar to AA sequence:RefSeq:WP_013968910.1
UDP-glucose/GDP-mannose dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002678989.1
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: protein motif:HMM:NF024206.2
ankyrin repeat domain-containing protein
COORDINATES: protein motif:HMM:TIGR01099.1
GO:0003983 - UTP:glucose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO:0009225 - nucleotide-sugar metabolic process [Evidence IEA]
UTP--glucose-1-phosphate uridylyltransferase GalU
COORDINATES: protein motif:HMM:NF020133.2
COORDINATES: similar to AA sequence:RefSeq:WP_013255775.1
COORDINATES: similar to AA sequence:RefSeq:WP_013605937.1
COORDINATES: similar to AA sequence:RefSeq:WP_014268804.1
COORDINATES: protein motif:HMM:NF013697.2
COORDINATES: protein motif:HMM:NF027681.2
NAD-dependent epimerase/dehydratase family protein
COORDINATES: protein motif:HMM:NF012360.2
GO:0016746 - acyltransferase activity [Evidence IEA]; GO:0120225 - coenzyme A binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013884.2
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF025082.2
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016145.2
polysaccharide pyruvyl transferase family protein
COORDINATES: protein motif:HMM:NF013703.2
GO:0015297 - antiporter activity [Evidence IEA]; GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016328.2
Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain
COORDINATES: similar to AA sequence:RefSeq:WP_076612017.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF020874.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611494.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014455819.1
COORDINATES: similar to AA sequence:RefSeq:WP_020613541.1
COORDINATES: similar to AA sequence:RefSeq:WP_013253283.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: similar to AA sequence:RefSeq:WP_020613940.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015712510.1
GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002695578.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025418.2
COORDINATES: protein motif:HMM:NF016060.2
COORDINATES: protein motif:HMM:NF016668.2
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: protein motif:HMM:NF024832.2
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: protein motif:HMM:NF018659.2
SdiA-regulated domain-containing protein
COORDINATES: protein motif:HMM:NF020337.2
COORDINATES: protein motif:HMM:NF027640.2
COORDINATES: similar to AA sequence:RefSeq:WP_014625234.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
membrane lipoprotein lipid attachment site-containing protein
COORDINATES: protein motif:HMM:NF016648.2
COORDINATES: similar to AA sequence:RefSeq:WP_009105749.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisH
COORDINATES: similar to AA sequence:RefSeq:WP_016519773.1
GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisF
COORDINATES: similar to AA sequence:RefSeq:WP_020612791.1
COORDINATES: protein motif:HMM:TIGR00342.1
GO:0140741 - tRNA U4 sulfurtransferase [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF012488.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013968776.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: protein motif:HMM:NF013146.2
COORDINATES: protein motif:HMM:NF013887.2
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
3-dehydroquinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013968760.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003724 - RNA helicase activity [Evidence IEA]
GO:0006397 - mRNA processing [Evidence IEA]; GO:0008380 - RNA splicing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002703798.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013314571.1
[FeFe] hydrogenase H-cluster maturation GTPase HydF
COORDINATES: similar to AA sequence:RefSeq:WP_014624166.1
COORDINATES: protein motif:HMM:TIGR03956.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
[FeFe] hydrogenase H-cluster radical SAM maturase HydE
COORDINATES: protein motif:HMM:TIGR03955.1
[FeFe] hydrogenase H-cluster radical SAM maturase HydG
COORDINATES: similar to AA sequence:RefSeq:WP_020611520.1
COORDINATES: protein motif:HMM:TIGR01488.1
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025070.2
COORDINATES: protein motif:HMM:NF012906.2
COORDINATES: similar to AA sequence:RefSeq:WP_013967831.1
COORDINATES: similar to AA sequence:RefSeq:WP_013967830.1
COORDINATES: similar to AA sequence:RefSeq:WP_014623929.1
COORDINATES: protein motif:HMM:NF017568.2
COORDINATES: protein motif:HMM:NF003917.0
GO:0009358 - polyphosphate kinase complex [Evidence IEA]
GO:0006799 - polyphosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013700608.1
GO:0003872 - 6-phosphofructokinase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006002 - fructose 6-phosphate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013968444.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008716 - D-alanine-D-alanine ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
D-alanine--D-alanine ligase family protein
COORDINATES: protein motif:HMM:NF014711.2
COORDINATES: protein motif:HMM:NF001126.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_020611286.1
COORDINATES: protein motif:HMM:TIGR01051.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013757661.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018113686.1
COORDINATES: similar to AA sequence:RefSeq:WP_020612306.1
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0045861 - negative regulation of proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013314410.1
COORDINATES: similar to AA sequence:RefSeq:WP_013968740.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024871.2
GO:0016755 - aminoacyltransferase activity [Evidence IEA]
GO:0044038 - cell wall macromolecule biosynthetic process [Evidence IEA]
peptidoglycan bridge formation glycyltransferase FemA/FemB family protein
COORDINATES: protein motif:HMM:NF010030.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004329 - formate-tetrahydrofolate ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013436.2
COORDINATES: similar to AA sequence:RefSeq:WP_014271783.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0008175 - tRNA methyltransferase activity [Evidence IEA]
tRNA (cytidine(34)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014271336.1
GO:0015969 - guanosine tetraphosphate metabolic process [Evidence IEA]; GO:0015968 - stringent response [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00536.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_016523844.1
GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: protein motif:HMM:NF012993.2
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
nitrilase-related carbon-nitrogen hydrolase
COORDINATES: protein motif:HMM:NF028243.2
COORDINATES: protein motif:HMM:NF038011.1
COORDINATES: protein motif:HMM:NF020252.2
COORDINATES: protein motif:HMM:NF014893.2
COORDINATES: protein motif:HMM:NF019491.2
COORDINATES: similar to AA sequence:RefSeq:WP_013758089.1
COORDINATES: protein motif:HMM:NF013380.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
tRNA-dihydrouridine synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020614023.1
COORDINATES: protein motif:HMM:TIGR02122.1
TAXI family TRAP transporter solute-binding subunit
COORDINATES: protein motif:HMM:TIGR02123.1
COORDINATES: protein motif:HMM:NF015894.2
COORDINATES: protein motif:HMM:NF012797.2
COORDINATES: similar to AA sequence:RefSeq:WP_014455433.1
GO:0008047 - enzyme activator activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013755.2
GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF019413.2
COORDINATES: protein motif:HMM:NF025445.2
COORDINATES: protein motif:HMM:TIGR03168.1
1-phosphofructokinase family hexose kinase
COORDINATES: similar to AA sequence:RefSeq:WP_007934746.1
COORDINATES: similar to AA sequence:RefSeq:WP_018526222.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_014269949.1
COORDINATES: similar to AA sequence:RefSeq:WP_013968110.1
GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF033788.1
COORDINATES: similar to AA sequence:RefSeq:WP_013255614.1
COORDINATES: similar to AA sequence:RefSeq:WP_020614108.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020614107.1
COORDINATES: protein motif:HMM:NF024498.2
COORDINATES: protein motif:HMM:NF014713.2
GO:0017004 - cytochrome complex assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF017760.2
PAS domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:NF015155.2
COORDINATES: protein motif:HMM:NF028441.2
GO:0044874 - lipoprotein localization to outer membrane [Evidence IEA]; GO:0042953 - lipoprotein transport [Evidence IEA]
sensor domain-containing diguanylate cyclase
COORDINATES: protein motif:HMM:TIGR01065.1
COORDINATES: protein motif:HMM:NF012981.2
COORDINATES: protein motif:HMM:NF013222.2
GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: protein motif:HMM:NF012699.2
GO:0006629 - lipid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014455760.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: protein motif:HMM:NF020543.2
COORDINATES: protein motif:HMM:NF013143.2
GO:0030001 - metal ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
zinc ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF012511.2
GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014623859.1
COORDINATES: protein motif:HMM:NF012444.2
bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_013312997.1
bifunctional anthranilate synthase component II/anthranilate phosphoribosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014456563.1
COORDINATES: similar to AA sequence:RefSeq:WP_018527324.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
rhomboid family intramembrane serine protease
COORDINATES: similar to AA sequence:RefSeq:WP_013314700.1
COORDINATES: protein motif:HMM:NF013607.2
GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA]
GO:0006470 - protein dephosphorylation [Evidence IEA]
low molecular weight protein-tyrosine-phosphatase
COORDINATES: protein motif:HMM:NF015818.2
COORDINATES: protein motif:HMM:NF014035.2
COORDINATES: similar to AA sequence:RefSeq:WP_018527484.1
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF007039.0
GO:0015079 - potassium ion transmembrane transporter activity [Evidence IEA]
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013256231.1
COORDINATES: protein motif:HMM:NF013672.2
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018527518.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010699503.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00152.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF016895.2
GO:0042834 - peptidoglycan binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013314062.1
COORDINATES: similar to AA sequence:RefSeq:WP_013314056.1
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013117.2
COORDINATES: protein motif:HMM:NF017026.2
COORDINATES: similar to AA sequence:RefSeq:WP_002671939.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012379.2
COORDINATES: similar to AA sequence:RefSeq:WP_013968323.1
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: protein motif:HMM:TIGR01383.1
COORDINATES: protein motif:HMM:TIGR00300.1
COORDINATES: similar to AA sequence:RefSeq:WP_016670456.1
GO:0008776 - acetate kinase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006085 - acetyl-CoA biosynthetic process [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: protein motif:HMM:NF012907.2
COORDINATES: similar to AA sequence:RefSeq:WP_014454456.1
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: protein motif:HMM:NF013528.2
COORDINATES: protein motif:HMM:TIGR03596.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013970066.1
GO:1990610 - acetolactate synthase regulator activity [Evidence IEA]
GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00118.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014795.2
GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013126.2
COORDINATES: similar to AA sequence:RefSeq:WP_013254822.1
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015639.2
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF000768.0
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013836.2
GO:0070569 - uridylyltransferase activity [Evidence IEA]
UTP--glucose-1-phosphate uridylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015711972.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
pyridoxal phosphate-dependent aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013739601.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015709299.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014624448.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014075.2
COORDINATES: protein motif:HMM:NF013100.2
GO:0008658 - penicillin binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02227.1
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: similar to AA sequence:RefSeq:WP_013255197.1
GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: protein motif:HMM:NF026165.2
COORDINATES: similar to AA sequence:RefSeq:WP_013255191.1
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018526482.1
COORDINATES: protein motif:HMM:NF024873.2
ribonuclease H-like domain-containing protein
COORDINATES: protein motif:HMM:TIGR00730.1
COORDINATES: protein motif:HMM:NF013347.2
COORDINATES: protein motif:HMM:TIGR01970.1
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013077.2
COORDINATES: protein motif:HMM:NF024971.2
zinc-dependent metalloprotease family protein
COORDINATES: protein motif:HMM:NF012428.2
COORDINATES: protein motif:HMM:NF017495.2
COORDINATES: similar to AA sequence:RefSeq:WP_014625595.1
COORDINATES: protein motif:HMM:NF012437.2
GO:0009190 - cyclic nucleotide biosynthetic process [Evidence IEA]; GO:0035556 - intracellular signal transduction [Evidence IEA]
adenylate/guanylate cyclase domain-containing protein
COORDINATES: protein motif:HMM:NF022137.2
COORDINATES: protein motif:HMM:NF001899.0
GO:0004373 - glycogen (starch) synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020613307.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013313554.1
GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02550.1
COORDINATES: similar to AA sequence:RefSeq:WP_013255180.1
COORDINATES: similar to AA sequence:RefSeq:WP_013968575.1
GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006109 - regulation of carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010255567.1
COORDINATES: protein motif:HMM:TIGR03725.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: similar to AA sequence:RefSeq:WP_013607569.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: protein motif:HMM:NF018894.2
GO:0035438 - cyclic-di-GMP binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF005188.0
GO:0007155 - cell adhesion [Evidence IEA]
COORDINATES: protein motif:HMM:NF015602.2
COORDINATES: similar to AA sequence:RefSeq:WP_014624992.1
COORDINATES: protein motif:HMM:NF016611.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00013
COORDINATES: protein motif:HMM:NF017016.2
GO:0000917 - division septum assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF017786.2
GO:0090529 - cell septum assembly [Evidence IEA]; GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020613325.1
COORDINATES: similar to AA sequence:RefSeq:WP_010261033.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016522923.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016501.2
flagellar filament outer layer protein FlaA
COORDINATES: similar to AA sequence:RefSeq:WP_002668795.1
COORDINATES: protein motif:HMM:TIGR00010.1
COORDINATES: similar to AA sequence:RefSeq:WP_013945275.1
COORDINATES: protein motif:HMM:TIGR03696.1
RHS repeat-associated core domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_076611589.1
COORDINATES: similar to AA sequence:RefSeq:WP_015711212.1
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: protein motif:HMM:NF006155.0
COORDINATES: protein motif:HMM:NF024898.2
COORDINATES: similar to AA sequence:RefSeq:WP_002698252.1
COORDINATES: similar to AA sequence:RefSeq:WP_002692742.1
COORDINATES: protein motif:HMM:NF013069.2
COORDINATES: protein motif:HMM:NF024603.2
COORDINATES: similar to AA sequence:RefSeq:WP_001014314.1
COORDINATES: protein motif:HMM:NF013045.2
GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO:0009451 - RNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00401.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: similar to AA sequence:RefSeq:WP_000913315.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: protein motif:HMM:NF015132.2
COORDINATES: protein motif:HMM:NF013348.2
COORDINATES: protein motif:HMM:TIGR03156.1
COORDINATES: similar to AA sequence:RefSeq:WP_010263582.1
GO:0008899 - homoserine O-succinyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013254961.1
COORDINATES: similar to AA sequence:RefSeq:WP_014269382.1
COORDINATES: protein motif:HMM:NF014615.2
homocysteine S-methyltransferase family protein
COORDINATES: protein motif:HMM:NF016289.2
COORDINATES: protein motif:HMM:NF015948.2
COORDINATES: similar to AA sequence:RefSeq:WP_013605724.1
GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_002675005.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012257.2
cyclic nucleotide-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013314557.1
COORDINATES: similar to AA sequence:RefSeq:WP_014455644.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020611325.1
COORDINATES: protein motif:HMM:NF024909.2
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: protein motif:HMM:NF024973.2
COORDINATES: protein motif:HMM:NF024773.2
COORDINATES: similar to AA sequence:RefSeq:WP_013968299.1
COORDINATES: protein motif:HMM:NF028468.2
COORDINATES: protein motif:HMM:NF024703.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
helicase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF005741.0
dihydroorotate dehydrogenase-like protein
COORDINATES: similar to AA sequence:RefSeq:WP_002670325.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0140662 - ATP-dependent protein folding chaperone [Evidence IEA]
COORDINATES: protein motif:HMM:NF014825.2
SEC-C metal-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013757949.1
COORDINATES: similar to AA sequence:RefSeq:WP_020614171.1
GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006187726.1
COORDINATES: protein motif:HMM:NF024110.2
COORDINATES: protein motif:HMM:NF003994.0
redox-sensing transcriptional repressor Rex
COORDINATES: protein motif:HMM:NF017743.2
class I SAM-dependent RNA methyltransferase
COORDINATES: protein motif:HMM:NF024753.2
PQQ-binding-like beta-propeller repeat protein
COORDINATES: protein motif:HMM:NF017106.2
COORDINATES: similar to AA sequence:RefSeq:WP_002684692.1
GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02074.1
COORDINATES: similar to AA sequence:RefSeq:WP_015710473.1
COORDINATES: similar to AA sequence:RefSeq:WP_013254328.1
GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
Crp/Fnr family transcriptional regulator
COORDINATES: protein motif:HMM:NF014758.2
COORDINATES: protein motif:HMM:NF012686.2
COORDINATES: similar to AA sequence:RefSeq:WP_013740379.1
COORDINATES: similar to AA sequence:RefSeq:WP_013256013.1
GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013256014.1
COORDINATES: protein motif:HMM:TIGR00014.1
GO:0008794 - arsenate reductase (glutaredoxin) activity [Evidence IEA]
This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite, after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell, providing resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024571.2
COORDINATES: similar to AA sequence:RefSeq:WP_004085174.1
COORDINATES: similar to AA sequence:RefSeq:WP_015708685.1
COORDINATES: protein motif:HMM:NF024676.2
COORDINATES: protein motif:HMM:NF021352.2
COORDINATES: similar to AA sequence:RefSeq:WP_014454961.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF012372.2
GO:0003886 - DNA (cytosine-5-)-methyltransferase activity [Evidence IEA]
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF021106.2
COORDINATES: protein motif:HMM:NF012330.2
protein-tyrosine phosphatase family protein
COORDINATES: protein motif:HMM:NF024642.2
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: protein motif:HMM:TIGR03830.1
type II toxin-antitoxin system MqsA family antitoxin
COORDINATES: protein motif:HMM:NF018644.2
COORDINATES: similar to AA sequence:RefSeq:WP_014270909.1
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004491.0
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018525510.1
COORDINATES: similar to AA sequence:RefSeq:WP_020612003.1
COORDINATES: protein motif:HMM:TIGR01499.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008841 - dihydrofolate synthase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004326 - tetrahydrofolylpolyglutamate synthase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
folylpolyglutamate synthase/dihydrofolate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014455469.1
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF028007.2
GO:0051219 - phosphoprotein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015710633.1
COORDINATES: protein motif:HMM:TIGR02495.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]; GO:0051353 - positive regulation of oxidoreductase activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase activating protein
COORDINATES: protein motif:HMM:NF024984.2
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016524717.1
GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758332.1
GO:0140110 - transcription regulator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013255458.1
COORDINATES: similar to AA sequence:RefSeq:WP_020614290.1
GO:0004648 - O-phospho-L-serine:2-oxoglutarate aminotransferase activity [Evidence IEA]
GO:0006564 - L-serine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013224.2
Lrp/AsnC family transcriptional regulator
COORDINATES: protein motif:HMM:NF018004.2
COORDINATES: similar to AA sequence:RefSeq:WP_013313362.1
COORDINATES: similar to AA sequence:RefSeq:WP_020614189.1
COORDINATES: protein motif:HMM:NF014523.2
COORDINATES: protein motif:HMM:NF013740.2
GO:1905887 - autoinducer AI-2 transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00550.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013621.2
adenylyltransferase/cytidyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015706577.1
COORDINATES: protein motif:HMM:TIGR01891.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013968306.1
GO:0004349 - glutamate 5-kinase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020612625.1
COORDINATES: similar to AA sequence:RefSeq:WP_014455980.1
COORDINATES: similar to AA sequence:RefSeq:WP_014269376.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013969995.1
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014454810.1
basic amino acid ABC transporter substrate-binding protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00167
purine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:TIGR01857.1
GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine synthase
COORDINATES: similar to AA sequence:RefSeq:WP_015706547.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: similar to AA sequence:RefSeq:WP_013757814.1
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_009105451.1
GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013607821.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: similar to AA sequence:RefSeq:WP_014624898.1
GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
phosphoribosylglycinamide formyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015712985.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_013314038.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013967889.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0015803 - branched-chain amino acid transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
branched-chain amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_020611057.1
LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
branched-chain amino acid ABC transporter permease LivH
COORDINATES: similar to AA sequence:RefSeq:WP_018527665.1
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_013252966.1
COORDINATES: similar to AA sequence:RefSeq:WP_020611054.1
methyltransferase domain-containing protein
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04265.1
GO:0008808 - cardiolipin synthase activity [Evidence IEA]
GO:0032049 - cardiolipin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002679668.1
GO:0016891 - endoribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]
GO:0042779 - tRNA 3'-trailer cleavage [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04336.1
COORDINATES: similar to AA sequence:RefSeq:WP_016480000.1
COORDINATES: protein motif:HMM:NF016839.2
GO:0051301 - cell division [Evidence IEA]
septum formation initiator family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013255808.1
COORDINATES: similar to AA sequence:RefSeq:WP_013313069.1
peptidase dimerization domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020614411.1
COORDINATES: similar to AA sequence:RefSeq:WP_002704958.1
COORDINATES: similar to AA sequence:RefSeq:WP_013255801.1
GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006526 - arginine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014625630.1
aspartate aminotransferase family protein
COORDINATES: protein motif:HMM:NF012899.2
GO:0003991 - acetylglutamate kinase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01850.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_013701194.1
COORDINATES: protein motif:HMM:TIGR00121.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014270710.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012422400.1
COORDINATES: similar to AA sequence:RefSeq:WP_013969262.1
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020614422.1
GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00966.2
COORDINATES: protein motif:HMM:NF024304.2
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014268826.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF039337.1
COORDINATES: similar to AA sequence:RefSeq:WP_014625136.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004819 - glutamine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006425 - glutaminyl-tRNA aminoacylation [Evidence IEA]
glutamine--tRNA ligase/YqeY domain fusion protein
COORDINATES: protein motif:HMM:TIGR00871.1
GO:0004345 - glucose-6-phosphate dehydrogenase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: protein motif:HMM:NF016160.2
SoxR reducing system RseC family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014455845.1
RnfABCDGE type electron transport complex subunit D
COORDINATES: protein motif:HMM:NF016121.2
COORDINATES: similar to AA sequence:RefSeq:WP_013313128.1
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]
NADH:ubiquinone reductase (Na(+)-transporting) subunit D
COORDINATES: similar to AA sequence:RefSeq:WP_013313129.1
COORDINATES: similar to AA sequence:RefSeq:WP_013607731.1
2Fe-2S iron-sulfur cluster binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014623986.1
COORDINATES: protein motif:HMM:NF015674.2
COORDINATES: protein motif:HMM:NF018884.2
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014477.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO:0017013 - protein flavinylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF025229.2
FlgD immunoglobulin-like domain containing protein
COORDINATES: protein motif:HMM:NF008748.0
GO:0003723 - RNA binding [Evidence IEA]; GO:0008990 - rRNA (guanine-N2-)-methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL
GO:0009927 - histidine phosphotransfer kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015908.2
COORDINATES: protein motif:HMM:NF013868.2
COORDINATES: similar to AA sequence:RefSeq:WP_013968263.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020612726.1
COORDINATES: similar to AA sequence:RefSeq:WP_013254413.1
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0008984 - protein-glutamate methylesterase activity [Evidence IEA]; GO:0050568 - protein-glutamine glutaminase activity [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0018277 - protein deamination [Evidence IEA]; GO:0006482 - protein demethylation [Evidence IEA]
chemotaxis response regulator protein-glutamate methylesterase
COORDINATES: similar to AA sequence:RefSeq:WP_013702249.1
COORDINATES: similar to AA sequence:RefSeq:WP_114630784.1
GO:0003747 - translation release factor activity [Evidence IEA]
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF019911.2
COORDINATES: similar to AA sequence:RefSeq:WP_013254511.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: similar to AA sequence:RefSeq:WP_016517819.1
COORDINATES: similar to AA sequence:RefSeq:WP_014624882.1
ATP-dependent Clp protease ATP-binding subunit
COORDINATES: protein motif:HMM:NF024915.2
COORDINATES: protein motif:HMM:NF012697.2
COORDINATES: protein motif:HMM:TIGR04337.1
AmmeMemoRadiSam system radical SAM enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_020613800.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013758482.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013739297.1
GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(46)-N7)-methyltransferase TrmB
COORDINATES: similar to AA sequence:RefSeq:WP_013313944.1
COORDINATES: similar to AA sequence:RefSeq:WP_018526183.1
COORDINATES: similar to AA sequence:RefSeq:WP_010257352.1
COORDINATES: protein motif:HMM:TIGR02504.1
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
adenosylcobalamin-dependent ribonucleoside-diphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_013313180.1
COORDINATES: protein motif:HMM:TIGR01133.1
GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
COORDINATES: protein motif:HMM:NF014704.2
COORDINATES: protein motif:HMM:NF024575.2
COORDINATES: similar to AA sequence:RefSeq:WP_013254299.1
COORDINATES: similar to AA sequence:RefSeq:WP_020614165.1
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013254082.1
COORDINATES: protein motif:HMM:NF015634.2
COORDINATES: similar to AA sequence:RefSeq:WP_016525101.1
COORDINATES: protein motif:HMM:TIGR01280.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00237.1
COORDINATES: protein motif:HMM:TIGR04321.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014409.2
COORDINATES: protein motif:HMM:NF014686.2
COORDINATES: protein motif:HMM:NF013670.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022112.2
COORDINATES: similar to AA sequence:RefSeq:WP_013255488.1
COORDINATES: similar to AA sequence:RefSeq:WP_002696439.1
COORDINATES: protein motif:HMM:NF013867.2
COORDINATES: similar to AA sequence:RefSeq:WP_014625379.1
COORDINATES: similar to AA sequence:RefSeq:WP_020612278.1
COORDINATES: protein motif:HMM:NF028237.2
histidine kinase dimerization/phosphoacceptor domain -containing protein
COORDINATES: protein motif:HMM:TIGR00317.1
GO:0008818 - cobalamin 5'-phosphate synthase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
adenosylcobinamide-GDP ribazoletransferase
COORDINATES: protein motif:HMM:NF000996.0
GO:0008939 - nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity [Evidence IEA]
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
COORDINATES: protein motif:HMM:NF014351.2
GO:0043752 - adenosylcobinamide kinase activity [Evidence IEA]; GO:0008820 - cobinamide phosphate guanylyltransferase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
COORDINATES: protein motif:HMM:NF012382.2
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF002281.0
COORDINATES: protein motif:HMM:NF012772.2
bifunctional diguanylate cyclase/phosphodiesterase
COORDINATES: protein motif:HMM:NF024863.2
GDSL-type esterase/lipase family protein
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: protein motif:HMM:NF012298.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF023109.2
COORDINATES: protein motif:HMM:NF014516.2
COORDINATES: similar to AA sequence:RefSeq:WP_014455278.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018527452.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010257846.1
COORDINATES: protein motif:HMM:TIGR02273.1
GO:0006364 - rRNA processing [Evidence IEA]
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014269200.1
GO:0009019 - tRNA (guanine-N1-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_014269199.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF014119.2
COORDINATES: similar to AA sequence:RefSeq:WP_013701407.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013254477.1
COORDINATES: similar to AA sequence:RefSeq:WP_009106331.1
GO:0000036 - acyl carrier activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018527440.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015707540.1
COORDINATES: protein motif:HMM:TIGR01378.1
GO:0004788 - thiamine diphosphokinase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019356.2
COORDINATES: protein motif:HMM:NF012766.2
COORDINATES: similar to AA sequence:RefSeq:WP_013968854.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013968853.1
COORDINATES: protein motif:HMM:TIGR00247.1
GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01391.1
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020613657.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020613656.1
C4-type zinc ribbon domain-containing protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
COORDINATES: similar to AA sequence:RefSeq:WP_013968845.1
GO:0000902 - cell morphogenesis [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00219.1
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: protein motif:HMM:NF016019.2
COORDINATES: similar to AA sequence:RefSeq:WP_013254658.1
COORDINATES: similar to AA sequence:RefSeq:WP_016518110.1
TIGR03936 family radical SAM-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_010263152.1
nucleoside triphosphate pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_014455554.1
GO:0009975 - cyclase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016849 - phosphorus-oxygen lyase activity [Evidence IEA]; GO:0032555 - purine ribonucleotide binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF021492.2
COORDINATES: similar to AA sequence:RefSeq:WP_013758846.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_018525254.1
COORDINATES: similar to AA sequence:RefSeq:WP_013968834.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014455559.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020613635.1
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014455561.1
COORDINATES: protein motif:HMM:TIGR01498.1
GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
COORDINATES: similar to AA sequence:RefSeq:WP_016525596.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015711421.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013254627.1
COORDINATES: protein motif:HMM:NF020928.2
GO:0003729 - mRNA binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015706765.1
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013757245.1
COORDINATES: similar to AA sequence:RefSeq:WP_015706762.1
COORDINATES: similar to AA sequence:RefSeq:WP_020610826.1
COORDINATES: protein motif:HMM:NF013381.2
GO:0004853 - uroporphyrinogen decarboxylase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
uroporphyrinogen decarboxylase family protein
COORDINATES: protein motif:HMM:NF003766.0
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0008973 - phosphopentomutase activity [Evidence IEA]
GO:0043094 - cellular metabolic compound salvage [Evidence IEA]; GO:0009117 - nucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014270586.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020611322.1
L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_014270587.1
COORDINATES: similar to AA sequence:RefSeq:WP_013970111.1
GO:0004849 - uridine kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012970.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
D-alanyl-D-alanine carboxypeptidase family protein
COORDINATES: protein motif:HMM:NF002759.0
GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014456766.1
COORDINATES: similar to AA sequence:RefSeq:WP_013607636.1
COORDINATES: similar to AA sequence:RefSeq:WP_013254901.1
COORDINATES: similar to AA sequence:RefSeq:WP_013254900.1
COORDINATES: similar to AA sequence:RefSeq:WP_013739693.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013967846.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0043096 - purine nucleobase salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF016239.2
GO:0008770 - [acyl-carrier-protein] phosphodiesterase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014156.2
COORDINATES: protein motif:HMM:NF024742.2
GO:0015293 - symporter activity [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016520355.1
GO:0045121 - membrane raft [Evidence IEA]
GO:0034982 - mitochondrial protein processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF014062.2
COORDINATES: protein motif:HMM:TIGR00705.1
GO:0008233 - peptidase activity [Evidence IEA]
GO:0006508 - proteolysis [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01340.1
COORDINATES: protein motif:HMM:NF014325.2
COORDINATES: protein motif:HMM:TIGR01967.1
COORDINATES: protein motif:HMM:NF002677.0
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015423.2
GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
trimeric intracellular cation channel family protein
COORDINATES: protein motif:HMM:TIGR00172.1
COORDINATES: similar to AA sequence:RefSeq:WP_018526252.1
COORDINATES: similar to AA sequence:RefSeq:WP_014456020.1
COORDINATES: similar to AA sequence:RefSeq:WP_015707554.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013968873.1
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: similar to AA sequence:RefSeq:WP_013968875.1
GO:0030604 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity [Evidence IEA]
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
1-deoxy-D-xylulose-5-phosphate reductoisomerase
COORDINATES: protein motif:HMM:TIGR00054.1
COORDINATES: protein motif:HMM:NF022179.2
late competence development ComFB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020612321.1
GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014456028.1
COORDINATES: similar to AA sequence:RefSeq:WP_013255439.1
COORDINATES: similar to AA sequence:RefSeq:WP_013255440.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00166.1
COORDINATES: similar to AA sequence:RefSeq:WP_014623926.1
GO:0097367 - carbohydrate derivative binding [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014625.2
COORDINATES: similar to AA sequence:RefSeq:WP_013256111.1
diphosphate--fructose-6-phosphate 1-phosphotransferase
COORDINATES: protein motif:HMM:TIGR01695.1
GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
murein biosynthesis integral membrane protein MurJ
COORDINATES: similar to AA sequence:RefSeq:WP_014624756.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015684.2
COORDINATES: similar to AA sequence:RefSeq:WP_013702209.1
GO:0004170 - dUTP diphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006226 - dUMP biosynthetic process [Evidence IEA]; GO:0046081 - dUTP catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002700154.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014024011.1
COORDINATES: protein motif:HMM:TIGR00431.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00082.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013759092.1
COORDINATES: similar to AA sequence:RefSeq:WP_020613611.1
COORDINATES: protein motif:HMM:NF014617.2
COORDINATES: similar to AA sequence:RefSeq:WP_013968806.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF015871.2
GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03303.1
outer membrane protein assembly factor BamA
COORDINATES: protein motif:HMM:NF016260.2
translocation/assembly module TamB domain-containing protein
COORDINATES: protein motif:HMM:TIGR00041.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013968800.1
COORDINATES: similar to AA sequence:RefSeq:WP_010695109.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: similar to AA sequence:RefSeq:WP_009107443.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: protein motif:HMM:TIGR00084.1
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_014455595.1
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: similar to AA sequence:RefSeq:WP_002693797.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:TIGR00539.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021981.2
COORDINATES: similar to AA sequence:RefSeq:WP_013968757.1
COORDINATES: protein motif:HMM:NF015722.2
SUMF1/EgtB/PvdO family nonheme iron enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_013968755.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: similar to AA sequence:RefSeq:WP_013606737.1
GO:0047834 - D-threo-aldose 1-dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024803.2
COORDINATES: similar to AA sequence:RefSeq:WP_020611620.1
COORDINATES: similar to AA sequence:RefSeq:WP_013254991.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020613426.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013313788.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013313787.1
COORDINATES: protein motif:HMM:NF013843.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0019136 - deoxynucleoside kinase activity [Evidence IEA]
GO:0008441 - 3'(2'),5'-bisphosphate nucleotidase activity [Evidence IEA]; GO:0004527 - exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: protein motif:HMM:NF033751.1
COORDINATES: protein motif:HMM:TIGR00350.1
COORDINATES: similar to AA sequence:RefSeq:WP_013968590.1
GO:0004488 - methylenetetrahydrofolate dehydrogenase (NADP+) activity [Evidence IEA]
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD
COORDINATES: similar to AA sequence:RefSeq:WP_013968493.1
GO:0009116 - nucleoside metabolic process [Evidence IEA]
phosphoribosyltransferase family protein
COORDINATES: protein motif:HMM:TIGR02037.1
GO:0005515 - protein binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006508 - proteolysis [Evidence IEA]; GO:0006950 - response to stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002670900.1
COORDINATES: protein motif:HMM:NF019339.2
COORDINATES: similar to AA sequence:RefSeq:WP_020613402.1
transcription antitermination factor NusB
COORDINATES: protein motif:HMM:NF025010.2
COORDINATES: protein motif:HMM:TIGR00810.1
COORDINATES: similar to AA sequence:RefSeq:WP_014455672.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011772017.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004618 - phosphoglycerate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014455674.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_013255024.1
COORDINATES: protein motif:HMM:TIGR00043.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019317.2
COORDINATES: similar to AA sequence:RefSeq:WP_010260977.1
COORDINATES: similar to AA sequence:RefSeq:WP_013255029.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00612.1
GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
GO:0044237 - cellular metabolic process [Evidence IEA]
flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_014455682.1
produces ATP from ADP in the presence of a proton gradient across the membrane; the K subunit is a nonenzymatic component which binds the dimeric form by interacting with the G and E subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013968954.1
COORDINATES: similar to AA sequence:RefSeq:WP_010256692.1
COORDINATES: similar to AA sequence:RefSeq:WP_002697196.1
COORDINATES: protein motif:HMM:NF022415.2
COORDINATES: protein motif:HMM:TIGR00157.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: protein motif:HMM:TIGR00067.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024986.2
COORDINATES: similar to AA sequence:RefSeq:WP_015706805.1
GO:0001522 - pseudouridine synthesis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00044.1
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_016525915.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0009381 - excinuclease ABC activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020613882.1
trypsin-like peptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013605860.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
GO:0098869 - cellular oxidant detoxification [Evidence IEA]
COORDINATES: protein motif:HMM:NF013629.2
COORDINATES: similar to AA sequence:RefSeq:WP_013253394.1
COORDINATES: similar to AA sequence:RefSeq:WP_014268872.1
COORDINATES: protein motif:HMM:TIGR00368.1
YifB family Mg chelatase-like AAA ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_013254912.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014624846.1
GO:0016868 - intramolecular transferase activity, phosphotransferases [Evidence IEA]
COORDINATES: protein motif:HMM:NF023462.2
COORDINATES: similar to AA sequence:RefSeq:WP_014455898.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
SurA N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013254418.1
COORDINATES: protein motif:HMM:NF012318.2
COORDINATES: similar to AA sequence:RefSeq:WP_014624695.1
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00447.2
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00731.1
GO:0008097 - 5S rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016525656.1
GO:0030435 - sporulation resulting in formation of a cellular spore [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00154.1
GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
GO:0016114 - terpenoid biosynthetic process [Evidence IEA]
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: similar to AA sequence:RefSeq:WP_013313823.1
GO:0008734 - L-aspartate oxidase activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013313822.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: protein motif:HMM:TIGR00090.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF015755.2
GO:0070726 - cell wall assembly [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00488.1
bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK
COORDINATES: protein motif:HMM:TIGR00482.1
GO:0000309 - nicotinamide-nucleotide adenylyltransferase activity [Evidence IEA]; GO:0004515 - nicotinate-nucleotide adenylyltransferase activity [Evidence IEA]
nicotinate (nicotinamide) nucleotide adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010259580.1
COORDINATES: similar to AA sequence:RefSeq:WP_015818156.1
COORDINATES: protein motif:HMM:NF016233.2
ribosomal-processing cysteine protease Prp
COORDINATES: similar to AA sequence:RefSeq:WP_013254392.1
COORDINATES: similar to AA sequence:RefSeq:WP_015712095.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF036553.2
COORDINATES: similar to AA sequence:RefSeq:WP_014624601.1
GO:0043714 - (R)-citramalate synthase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014270670.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
carbamoyl-phosphate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014455933.1
GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013968243.1
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013254386.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: protein motif:HMM:TIGR02937.1
COORDINATES: protein motif:HMM:NF021638.2
COORDINATES: similar to AA sequence:RefSeq:WP_002693113.1
GO:0009426 - bacterial-type flagellum basal body, distal rod [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014023983.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012905.2
COORDINATES: similar to AA sequence:RefSeq:WP_014624604.1
GO:1990397 - queuosine salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF018271.2
COORDINATES: protein motif:HMM:NF022430.2
COORDINATES: protein motif:HMM:NF013073.2
COORDINATES: protein motif:HMM:NF011443.0
GO:0016462 - pyrophosphatase activity [Evidence IEA]
putative manganese-dependent inorganic diphosphatase
COORDINATES: protein motif:HMM:TIGR00526.1
GO:0004150 - dihydroneopterin aldolase activity [Evidence IEA]
GO:0046656 - folic acid biosynthetic process [Evidence IEA]; GO:0006760 - folic acid-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004912347.1
GO:0003934 - GTP cyclohydrolase I activity [Evidence IEA]
GO:0042559 - pteridine-containing compound biosynthetic process [Evidence IEA]; GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012451.2
COORDINATES: similar to AA sequence:RefSeq:WP_013254866.1
GO:0008478 - pyridoxal kinase activity [Evidence IEA]
GO:0009443 - pyridoxal 5'-phosphate salvage [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00745.1
GO:0008677 - 2-dehydropantoate 2-reductase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
GO:0030551 - cyclic nucleotide binding [Evidence IEA]
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008173 - RNA methyltransferase activity [Evidence IEA]; GO:0070040 - rRNA (adenine-C2-)-methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0002935 - tRNA (adenine-C2-)-methyltransferase activity [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA]
GO:0030488 - tRNA methylation [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: similar to AA sequence:RefSeq:WP_009107222.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014625821.1
GO:0004815 - aspartate-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006422 - aspartyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013314984.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: protein motif:HMM:TIGR00132.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: similar to AA sequence:RefSeq:WP_013314986.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: similar to AA sequence:RefSeq:WP_014455935.1
COORDINATES: protein motif:HMM:NF024777.2
COORDINATES: similar to AA sequence:RefSeq:WP_020613876.1
COORDINATES: similar to AA sequence:RefSeq:WP_020613877.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF033641.1
GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019615.2
tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
COORDINATES: protein motif:HMM:TIGR00740.1
carboxy-S-adenosyl-L-methionine synthase CmoA
COORDINATES: protein motif:HMM:NF014627.2
COORDINATES: protein motif:HMM:NF016955.2
TerB family tellurite resistance protein
COORDINATES: similar to AA sequence:RefSeq:WP_015709413.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020613267.1
COORDINATES: similar to AA sequence:RefSeq:WP_013255318.1
GO:0005948 - acetolactate synthase complex [Evidence IEA]
GO:0003984 - acetolactate synthase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
biosynthetic-type acetolactate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018526511.1
GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006187555.1
COORDINATES: similar to AA sequence:RefSeq:WP_018526513.1
COORDINATES: protein motif:HMM:NF014600.2
COORDINATES: protein motif:HMM:NF015734.2
COORDINATES: protein motif:HMM:NF014908.2
COORDINATES: protein motif:HMM:NF012760.2
GO:0016742 - hydroxymethyl-, formyl- and related transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013969726.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013254244.1
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: protein motif:HMM:NF015146.2
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010696518.1
COORDINATES: similar to AA sequence:RefSeq:WP_014625460.1
COORDINATES: similar to AA sequence:RefSeq:WP_002688860.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019561.2
COORDINATES: similar to AA sequence:RefSeq:WP_014455152.1
GO:0004016 - adenylate cyclase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013968657.1
GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
GO:0042834 - peptidoglycan binding [Evidence IEA]; GO:0015288 - porin activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018526865.1
COORDINATES: similar to AA sequence:RefSeq:WP_013256546.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015706918.1
COORDINATES: protein motif:HMM:NF014676.2
COORDINATES: protein motif:HMM:TIGR00218.1
GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024770.2
COORDINATES: similar to AA sequence:RefSeq:WP_013607379.1
GO:0008108 - UDP-glucose:hexose-1-phosphate uridylyltransferase activity [Evidence IEA]
UDP-glucose--hexose-1-phosphate uridylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015712803.1
COORDINATES: similar to AA sequence:RefSeq:WP_014455241.1
GO:0047334 - diphosphate-fructose-6-phosphate 1-phosphotransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012961.2
COORDINATES: similar to AA sequence:RefSeq:WP_010255932.1
cytidine/deoxycytidylate deaminase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013607447.1
ribosome assembly RNA-binding protein YhbY
COORDINATES: protein motif:HMM:NF016347.2
COORDINATES: protein motif:HMM:NF014045.2
COORDINATES: protein motif:HMM:NF014658.2
COORDINATES: similar to AA sequence:RefSeq:WP_020612529.1
COORDINATES: protein motif:HMM:NF017536.2
metal ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF013465.2
metal ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:TIGR01127.1
GO:0004794 - L-threonine ammonia-lyase activity [Evidence IEA]
GO:0006549 - isoleucine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014456112.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018525969.1
COORDINATES: similar to AA sequence:RefSeq:WP_010260067.1
COORDINATES: similar to AA sequence:RefSeq:WP_015707391.1
COORDINATES: similar to AA sequence:RefSeq:WP_013254172.1
COORDINATES: protein motif:HMM:TIGR01400.1
GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013313715.1
COORDINATES: similar to AA sequence:RefSeq:WP_002687853.1
The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.
flagellar type III secretion system pore protein FliP
COORDINATES: protein motif:HMM:NF016250.2
COORDINATES: similar to AA sequence:RefSeq:WP_013254167.1
GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0003774 - cytoskeletal motor activity [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]; GO:0006935 - chemotaxis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013313711.1
COORDINATES: protein motif:HMM:NF015693.2
GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]
flagellar basal body-associated FliL family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020612474.1
COORDINATES: similar to AA sequence:RefSeq:WP_020612475.1
COORDINATES: similar to AA sequence:RefSeq:WP_013313707.1
COORDINATES: similar to AA sequence:RefSeq:WP_006189111.1
COORDINATES: similar to AA sequence:RefSeq:WP_013254160.1
COORDINATES: protein motif:HMM:NF014207.2
flagellar hook-length control protein FliK
COORDINATES: similar to AA sequence:RefSeq:WP_013254158.1
COORDINATES: protein motif:HMM:NF014144.2
GO:0009288 - bacterial-type flagellum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010259179.1
COORDINATES: similar to AA sequence:RefSeq:WP_015711091.1
COORDINATES: similar to AA sequence:RefSeq:WP_018525948.1
GO:0009433 - bacterial-type flagellum basal body, C ring [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014624579.1
GO:0009431 - bacterial-type flagellum basal body, MS ring [Evidence IEA]
flagellar basal-body MS-ring/collar protein FliF
COORDINATES: protein motif:HMM:TIGR00205.1
flagellar hook-basal body complex protein FliE
COORDINATES: similar to AA sequence:RefSeq:WP_013969124.1
COORDINATES: similar to AA sequence:RefSeq:WP_013254150.1
GO:0009429 - bacterial-type flagellum basal body, proximal rod [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010696779.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
ATP-dependent protease ATPase subunit HslU
COORDINATES: similar to AA sequence:RefSeq:WP_013969127.1
GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]
GO:0051603 - proteolysis involved in protein catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00732.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: protein motif:HMM:NF001399.0
GO:0003677 - DNA binding [Evidence IEA]; GO:0009037 - tyrosine-based site-specific recombinase activity [Evidence IEA]
GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014624569.1
COORDINATES: protein motif:HMM:TIGR01174.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF020067.2
FtsQ-type POTRA domain-containing protein
COORDINATES: protein motif:HMM:TIGR02614.1
GO:0051301 - cell division [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013254139.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: protein motif:HMM:TIGR01143.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0047480 - UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: similar to AA sequence:RefSeq:WP_014456154.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: protein motif:HMM:TIGR00242.1
GO:0051302 - regulation of cell division [Evidence IEA]
division/cell wall cluster transcriptional repressor MraZ
COORDINATES: similar to AA sequence:RefSeq:WP_020612501.1
COORDINATES: protein motif:HMM:NF027583.2
COORDINATES: protein motif:HMM:NF023478.2
COORDINATES: similar to AA sequence:RefSeq:WP_013968504.1
GO:0004126 - cytidine deaminase activity [Evidence IEA]
GO:0008655 - pyrimidine-containing compound salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013254127.1
COORDINATES: protein motif:HMM:TIGR00634.1
COORDINATES: protein motif:HMM:NF039482.1
COORDINATES: protein motif:HMM:NF013227.2
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015711146.1
GO:0052621 - diguanylate cyclase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014269022.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014456174.1
COORDINATES: protein motif:HMM:TIGR00089.1
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB
COORDINATES: similar to AA sequence:RefSeq:WP_015708294.1
COORDINATES: similar to AA sequence:RefSeq:WP_013254105.1
COORDINATES: similar to AA sequence:RefSeq:WP_014624907.1
GO:0008977 - prephenate dehydrogenase (NAD+) activity [Evidence IEA]; GO:0004665 - prephenate dehydrogenase (NADP+) activity [Evidence IEA]
GO:0006571 - tyrosine biosynthetic process [Evidence IEA]
prephenate dehydrogenase/arogenate dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013739629.1
GO:0008959 - phosphate acetyltransferase activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00036.1
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_014624910.1
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: protein motif:HMM:TIGR00755.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: protein motif:HMM:NF015714.2
COORDINATES: protein motif:HMM:TIGR00230.1
GO:0000023 - maltose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017522.2
TylF/MycF/NovP-related O-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013968902.1
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
nucleoside-diphosphate sugar epimerase/dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_013968903.1
GO:0008483 - transaminase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013923.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013969383.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014389.2
COORDINATES: similar to AA sequence:RefSeq:WP_010256137.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013608573.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: protein motif:HMM:NF024785.2
ATP phosphoribosyltransferase regulatory subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014624970.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013255699.1
GO:0004424 - imidazoleglycerol-phosphate dehydratase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020614233.1
COORDINATES: similar to AA sequence:RefSeq:WP_004790196.1
GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
mechanosensitive ion channel family protein
COORDINATES: protein motif:HMM:NF016166.2
COORDINATES: protein motif:HMM:TIGR00383.1
GO:0015087 - cobalt ion transmembrane transporter activity [Evidence IEA]; GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0006824 - cobalt ion transport [Evidence IEA]; GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013968383.1
COORDINATES: protein motif:HMM:NF013838.2
FliG C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF020660.2
GO:0030246 - carbohydrate binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013254504.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
RnfABCDGE type electron transport complex subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_013254503.1
RnfABCDGE type electron transport complex subunit A
COORDINATES: similar to AA sequence:RefSeq:WP_014269172.1
COORDINATES: similar to AA sequence:RefSeq:WP_013607010.1
COORDINATES: similar to AA sequence:RefSeq:WP_013739155.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002694450.1
COORDINATES: protein motif:HMM:TIGR01942.1
GO:0004652 - polynucleotide adenylyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006378 - mRNA polyadenylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012512.2
COORDINATES: similar to AA sequence:RefSeq:WP_013607492.1
COORDINATES: similar to AA sequence:RefSeq:WP_014271735.1
COORDINATES: similar to AA sequence:RefSeq:WP_020611674.1
COORDINATES: similar to AA sequence:RefSeq:WP_020611673.1
YgeY family selenium metabolism-linked hydrolase
COORDINATES: protein motif:HMM:NF019947.2
COORDINATES: similar to AA sequence:RefSeq:WP_013607323.1
GO:0008804 - carbamate kinase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013252733.1
COORDINATES: similar to AA sequence:RefSeq:WP_020613044.1
COORDINATES: protein motif:HMM:TIGR00334.1
GO:0043822 - ribonuclease M5 activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013970153.1
COORDINATES: protein motif:HMM:NF013756.2
COORDINATES: similar to AA sequence:RefSeq:WP_018525637.1
GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF016211.2
COORDINATES: similar to AA sequence:RefSeq:WP_000290139.1
COORDINATES: similar to AA sequence:RefSeq:WP_014624426.1
COORDINATES: protein motif:HMM:NF019244.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF013648.2
COORDINATES: protein motif:HMM:NF013219.2
COORDINATES: protein motif:HMM:NF014060.2
COORDINATES: similar to AA sequence:RefSeq:WP_018527121.1
GO:0004333 - fumarate hydratase activity [Evidence IEA]
GO:0006106 - fumarate metabolic process [Evidence IEA]; GO:0006108 - malate metabolic process [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013312944.1
COORDINATES: protein motif:HMM:TIGR02290.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF015000.2
GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]
glycerophosphodiester phosphodiesterase family protein
COORDINATES: protein motif:HMM:NF013446.2
GO:0004175 - endopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00216.1
GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]; GO:0015968 - stringent response [Evidence IEA]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_013254184.1
GO:0045900 - negative regulation of translational elongation [Evidence IEA]
energy-dependent translational throttle protein EttA
COORDINATES: similar to AA sequence:RefSeq:WP_010261694.1
COORDINATES: similar to AA sequence:RefSeq:WP_018525450.1
GO:0004372 - glycine hydroxymethyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0070905 - serine binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0019264 - glycine biosynthetic process from serine [Evidence IEA]
COORDINATES: protein motif:HMM:NF013961.2
transglutaminase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013314599.1
GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013968134.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF010480.0
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013254740.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF020459.2
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: protein motif:HMM:NF013046.2
COORDINATES: protein motif:HMM:NF013052.2
SET domain-containing protein-lysine N-methyltransferase
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF013395.2
COORDINATES: protein motif:HMM:NF019436.2
COORDINATES: similar to AA sequence:RefSeq:WP_007561126.1
GO:0016639 - oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF013491.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
PEP/pyruvate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014269642.1
GO:0008838 - diaminopropionate ammonia-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013567.2
COORDINATES: similar to AA sequence:RefSeq:WP_014270978.1
COORDINATES: protein motif:HMM:NF014228.2
GO:0070403 - NAD+ binding [Evidence IEA]
Sir2 family NAD-dependent protein deacetylase
COORDINATES: similar to AA sequence:RefSeq:WP_006189466.1
GO:0043856 - anti-sigma factor antagonist activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014625832.1
COORDINATES: protein motif:HMM:NF039904.1
COORDINATES: protein motif:HMM:NF012730.2
GO:0006811 - monoatomic ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00585.2
COORDINATES: similar to AA sequence:RefSeq:WP_013254942.1
COORDINATES: similar to AA sequence:RefSeq:WP_015707598.1
COORDINATES: protein motif:HMM:NF014442.2
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013368.2
COORDINATES: protein motif:HMM:NF004079.0
GO:0008782 - adenosylhomocysteine nucleosidase activity [Evidence IEA]; GO:0008930 - methylthioadenosine nucleosidase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]; GO:0009164 - nucleoside catabolic process [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
5'-methylthioadenosine/adenosylhomocysteine nucleosidase
COORDINATES: similar to AA sequence:RefSeq:WP_004791844.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0043768 - S-ribosylhomocysteine lyase activity [Evidence IEA]
GO:0009372 - quorum sensing [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01198.1
GO:0017057 - 6-phosphogluconolactonase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020611181.1
cation diffusion facilitator family transporter
COORDINATES: protein motif:HMM:NF014619.2
COORDINATES: similar to AA sequence:RefSeq:WP_010253466.1
COORDINATES: similar to AA sequence:RefSeq:WP_013968656.1
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]; GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00174.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: protein motif:HMM:NF013365.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
DNA-directed RNA polymerase subunit omega
GO:0005524 - ATP binding [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013759635.1
COORDINATES: similar to AA sequence:RefSeq:WP_013738808.1
COORDINATES: similar to AA sequence:RefSeq:WP_013253959.1
GO:0015103 - inorganic anion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013253143.1
GO:0005384 - manganese ion transmembrane transporter activity [Evidence IEA]
GO:0030026 - cellular manganese ion homeostasis [Evidence IEA]
COORDINATES: protein motif:HMM:NF019032.2
COORDINATES: similar to AA sequence:RefSeq:WP_018525153.1
COORDINATES: protein motif:HMM:NF015995.2
COORDINATES: protein motif:HMM:TIGR01186.1
glycine betaine/L-proline ABC transporter ATP-binding protein
proline/glycine betaine ABC transporter permease
COORDINATES: protein motif:HMM:TIGR01178.1
GO:0000034 - adenine deaminase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF021060.2
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006810 - transport [Evidence IEA]
energy coupling factor transporter S component ThiW
COORDINATES: protein motif:HMM:TIGR00693.1
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00097.1
GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: protein motif:HMM:NF014198.2
GO:0004417 - hydroxyethylthiazole kinase activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF013429.2
sugar phosphate isomerase/epimerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014455016.1
COORDINATES: protein motif:HMM:NF024093.2
COORDINATES: similar to AA sequence:RefSeq:WP_013255620.1
COORDINATES: similar to AA sequence:RefSeq:WP_020614114.1
COORDINATES: similar to AA sequence:RefSeq:WP_020614112.1
GO:0016853 - isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014269684.1
COORDINATES: protein motif:HMM:TIGR00048.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012402.2
COORDINATES: protein motif:HMM:NF012589.2
GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF015168.2
COORDINATES: protein motif:HMM:NF036578.2
COORDINATES: similar to AA sequence:RefSeq:WP_010261881.1
COORDINATES: similar to AA sequence:RefSeq:WP_010261883.1
COORDINATES: protein motif:HMM:NF015875.2
GO:0016432 - tRNA-uridine aminocarboxypropyltransferase activity [Evidence IEA]
tRNA-uridine aminocarboxypropyltransferase
COORDINATES: protein motif:HMM:NF038110.1
COORDINATES: similar to AA sequence:RefSeq:WP_013969442.1
S1 RNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013605872.1
COORDINATES: protein motif:HMM:NF014798.2
transketolase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016292974.1
COORDINATES: protein motif:HMM:NF014073.2
COORDINATES: protein motif:HMM:NF015366.2
COORDINATES: similar to AA sequence:RefSeq:WP_002666760.1
COORDINATES: protein motif:HMM:NF016115.2
GO:0016812 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024981.2
GO:0015293 - symporter activity [Evidence IEA]
bile acid:sodium symporter family protein
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013606367.1
COORDINATES: protein motif:HMM:NF018513.2
COORDINATES: similar to AA sequence:RefSeq:WP_016519811.1
COORDINATES: similar to AA sequence:RefSeq:WP_016292973.1
COORDINATES: similar to AA sequence:RefSeq:WP_014271777.1
COORDINATES: similar to AA sequence:RefSeq:WP_014271775.1
COORDINATES: protein motif:HMM:NF016178.2
COORDINATES: protein motif:HMM:NF040334.1
COORDINATES: protein motif:HMM:NF020916.2
polyphosphate polymerase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016290590.1
COORDINATES: similar to AA sequence:RefSeq:WP_020613989.1
COORDINATES: protein motif:HMM:NF020397.2
COORDINATES: similar to AA sequence:RefSeq:WP_013970234.1
COORDINATES: similar to AA sequence:RefSeq:WP_014454517.1
COORDINATES: similar to AA sequence:RefSeq:WP_014454516.1
COORDINATES: similar to AA sequence:RefSeq:WP_014270389.1
COORDINATES: similar to AA sequence:RefSeq:WP_014270390.1
COORDINATES: similar to AA sequence:RefSeq:WP_013970120.1
GO:0005515 - protein binding [Evidence IEA]; GO:0004856 - xylulokinase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0005997 - xylulose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF041635.1
COORDINATES: similar to AA sequence:RefSeq:WP_013256715.1
COORDINATES: protein motif:HMM:NF013752.2
COORDINATES: protein motif:HMM:TIGR04141.1
TIGR04141 family sporadically distributed protein
Fic/DOC family N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024704.2
COORDINATES: protein motif:HMM:NF004752.0
1,4-dihydroxy-2-naphthoate polyprenyltransferase
COORDINATES: protein motif:HMM:TIGR02249.1
GO:0009009 - site-specific recombinase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000138935.1
metal-sensitive transcriptional regulator
COORDINATES: protein motif:HMM:TIGR01511.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013607456.1
COORDINATES: protein motif:HMM:TIGR00255.1
COORDINATES: similar to AA sequence:RefSeq:WP_013969031.1
GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013313796.1
COORDINATES: protein motif:HMM:NF024112.2
COORDINATES: similar to AA sequence:RefSeq:WP_020613042.1
COORDINATES: protein motif:HMM:NF024246.2
COORDINATES: protein motif:HMM:NF012791.2
GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:NF012472.2
COORDINATES: protein motif:HMM:NF013382.2
COORDINATES: similar to AA sequence:RefSeq:WP_013740321.1
COORDINATES: protein motif:HMM:NF012656.2
COORDINATES: protein motif:HMM:NF008744.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003724 - RNA helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025925.2
COORDINATES: protein motif:HMM:NF021619.2
PocR ligand-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013255312.1
COORDINATES: protein motif:HMM:NF008277.0
GO:0030246 - carbohydrate binding [Evidence IEA]; GO:0016857 - racemase and epimerase activity, acting on carbohydrates and derivatives [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000343747.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR02817.1
zinc-binding alcohol dehydrogenase family protein
COORDINATES: protein motif:HMM:NF013412.2
COORDINATES: similar to AA sequence:RefSeq:WP_002339845.1
COORDINATES: protein motif:HMM:NF003163.0
Sir2 silent information regulator family NAD-dependent deacetylase
COORDINATES: protein motif:HMM:NF019013.2
GO:0030638 - polyketide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010698781.1
COORDINATES: protein motif:HMM:NF012435.2
COORDINATES: similar to AA sequence:RefSeq:WP_013253664.1
methionine/alanine import family NSS transporter small subunit
COORDINATES: nucleotide motif:Rfam:14.4:RF00050
FMN riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF015692.2
GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
ADP-ribosylglycohydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013254782.1
COORDINATES: protein motif:HMM:NF014608.2
GO:0004601 - peroxidase activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015708717.1
COORDINATES: similar to AA sequence:RefSeq:WP_013313093.1
COORDINATES: similar to AA sequence:RefSeq:WP_015708196.1
COORDINATES: similar to AA sequence:RefSeq:WP_015708197.1
COORDINATES: protein motif:HMM:NF012706.2
HAMP domain-containing methyl-accepting chemotaxis protein
COORDINATES: similar to AA sequence:RefSeq:WP_015708044.1
COORDINATES: similar to AA sequence:RefSeq:WP_015708045.1
COORDINATES: similar to AA sequence:RefSeq:WP_016290535.1
COORDINATES: similar to AA sequence:RefSeq:WP_002687266.1
COORDINATES: similar to AA sequence:RefSeq:WP_013253376.1
COORDINATES: protein motif:HMM:NF013353.2
GO:0036361 - racemase activity, acting on amino acids and derivatives [Evidence IEA]
aspartate/glutamate racemase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014270646.1
COORDINATES: similar to AA sequence:RefSeq:WP_013608619.1
COORDINATES: similar to AA sequence:RefSeq:WP_002687329.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF026177.2
COORDINATES: protein motif:HMM:NF015862.2
COORDINATES: protein motif:HMM:NF012596.2
COORDINATES: protein motif:HMM:NF014564.2
GO:0016740 - transferase activity [Evidence IEA]
GO:0071111 - cyclic-guanylate-specific phosphodiesterase activity [Evidence IEA]
GGDEF domain-containing phosphodiesterase
COORDINATES: protein motif:HMM:NF024818.2
COORDINATES: protein motif:HMM:NF008887.0
anaerobic nitric oxide reductase flavorubredoxin
COORDINATES: protein motif:HMM:NF013720.2
COORDINATES: protein motif:HMM:NF004637.0
GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: protein motif:HMM:NF023636.2
COORDINATES: similar to AA sequence:RefSeq:WP_013969297.1
COORDINATES: protein motif:HMM:NF015715.2
COORDINATES: protein motif:HMM:NF024812.2
COORDINATES: similar to AA sequence:RefSeq:WP_018526144.1
COORDINATES: protein motif:HMM:NF013777.2
COORDINATES: protein motif:HMM:TIGR02073.1
GO:0009274 - peptidoglycan-based cell wall [Evidence IEA]
COORDINATES: protein motif:HMM:NF019323.2
GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014456197.1
COORDINATES: protein motif:HMM:NF012670.2
COORDINATES: similar to AA sequence:RefSeq:WP_018527060.1
COORDINATES: protein motif:HMM:NF014474.2
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020611367.1
COORDINATES: similar to AA sequence:RefSeq:WP_020612209.1
GO:0071111 - cyclic-guanylate-specific phosphodiesterase activity [Evidence IEA]; GO:0052621 - diguanylate cyclase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00238.1
COORDINATES: protein motif:HMM:NF014689.2
manganese efflux pump MntP family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013314580.1
COORDINATES: similar to AA sequence:RefSeq:WP_013255525.1
D-lyxose/D-mannose family sugar isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_013255274.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612266.1
COORDINATES: protein motif:HMM:NF014376.2
COORDINATES: protein motif:HMM:NF025885.2
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_076611896.1
COORDINATES: similar to AA sequence:RefSeq:WP_013967607.1
COORDINATES: similar to AA sequence:RefSeq:WP_013252678.1
COORDINATES: similar to AA sequence:RefSeq:WP_020613845.1
functions to transport ribose at high affinity; forms a complex with RbsA2C2B; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009102919.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019200 - carbohydrate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014763.2
COORDINATES: similar to AA sequence:RefSeq:WP_013969745.1
COORDINATES: similar to AA sequence:RefSeq:WP_015573757.1
COORDINATES: protein motif:HMM:NF017273.2
COORDINATES: protein motif:HMM:NF015549.2
GO:0016020 - membrane [Evidence IEA]; GO:1902495 - transmembrane transporter complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013312851.1
COORDINATES: similar to AA sequence:RefSeq:WP_018526269.1
COORDINATES: similar to AA sequence:RefSeq:WP_013968702.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: protein motif:HMM:NF013798.2
COORDINATES: protein motif:HMM:NF017633.2
COORDINATES: protein motif:HMM:TIGR04335.1
COORDINATES: similar to AA sequence:RefSeq:WP_013255449.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_014625305.1
GO:0008864 - formyltetrahydrofolate deformylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01856.1
COORDINATES: similar to AA sequence:RefSeq:WP_013967513.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016661 - oxidoreductase activity, acting on other nitrogenous compounds as donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020611821.1
GO:0008929 - methylglyoxal synthase activity [Evidence IEA]
GO:0019242 - methylglyoxal biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013314236.1
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014624163.1
COORDINATES: protein motif:HMM:NF012478.2
COORDINATES: similar to AA sequence:RefSeq:WP_013969396.1
GO:0046873 - metal ion transmembrane transporter activity [Evidence IEA]
GO:0030001 - metal ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: protein motif:HMM:NF012684.2
alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB
COORDINATES: protein motif:HMM:NF013757.2
COORDINATES: protein motif:HMM:NF015957.2
COORDINATES: protein motif:HMM:NF018382.2
COORDINATES: protein motif:HMM:NF015945.2
COORDINATES: similar to AA sequence:RefSeq:WP_013608585.1
phage shock protein operon transcriptional activator
COORDINATES: similar to AA sequence:RefSeq:WP_016525316.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF010925.0
GO:0033819 - lipoyl(octanoyl) transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
ShlB/FhaC/HecB family hemolysin secretion/activation protein
COORDINATES: protein motif:HMM:NF024578.2
COORDINATES: protein motif:HMM:NF013589.2
COORDINATES: protein motif:HMM:NF014877.2
COORDINATES: similar to AA sequence:RefSeq:WP_010259671.1
GO:0016051 - carbohydrate biosynthetic process [Evidence IEA]
N-acetylneuraminate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015711870.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002704248.1
COORDINATES: similar to AA sequence:RefSeq:WP_002699015.1
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_015713123.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018526080.1
COORDINATES: protein motif:HMM:TIGR03598.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: protein motif:HMM:NF013375.2
COORDINATES: similar to AA sequence:RefSeq:WP_020611617.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013969265.1
GO:0004784 - superoxide dismutase activity [Evidence IEA]
GO:0019430 - removal of superoxide radicals [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002681498.1
COORDINATES: similar to AA sequence:RefSeq:WP_016523220.1
COORDINATES: similar to AA sequence:RefSeq:WP_013607870.1
peptide ABC transporter substrate-binding protein
1-acyl-sn-glycerol-3-phosphate acyltransferase
COORDINATES: protein motif:HMM:TIGR00409.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013256292.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012911.2
COORDINATES: similar to AA sequence:RefSeq:WP_013967947.1
COORDINATES: protein motif:HMM:NF014668.2
GO:0006282 - regulation of DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002682117.1
COORDINATES: similar to AA sequence:RefSeq:WP_010694886.1
COORDINATES: similar to AA sequence:RefSeq:WP_020611931.1
COORDINATES: similar to AA sequence:RefSeq:WP_013967938.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: protein motif:HMM:NF024252.2
COORDINATES: protein motif:HMM:NF015510.2
outer-membrane lipoprotein carrier protein LolA
COORDINATES: similar to AA sequence:RefSeq:WP_013607737.1
COORDINATES: similar to AA sequence:RefSeq:WP_015706859.1
COORDINATES: similar to AA sequence:RefSeq:WP_016525139.1
COORDINATES: protein motif:HMM:NF013890.2
GO:0052689 - carboxylic ester hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01417.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: protein motif:HMM:NF024899.2
S1-like domain-containing RNA-binding protein
COORDINATES: protein motif:HMM:NF015147.2
COORDINATES: similar to AA sequence:RefSeq:WP_013314287.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0018455 - alcohol dehydrogenase [NAD(P)+] activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013740099.1
NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_013740100.1
COORDINATES: similar to AA sequence:RefSeq:WP_002706749.1
COORDINATES: similar to AA sequence:RefSeq:WP_014269867.1
COORDINATES: similar to AA sequence:RefSeq:WP_014623864.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: protein motif:HMM:NF012300.2
COORDINATES: similar to AA sequence:RefSeq:WP_011109446.1
GO:0008697 - 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity [Evidence IEA]
GO:0045490 - pectin catabolic process [Evidence IEA]
5-dehydro-4-deoxy-D-glucuronate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_013608136.1
GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
GO:0004738 - pyruvate dehydrogenase activity [Evidence IEA]
pyruvate dehydrogenase (acetyl-transferring), homodimeric type
COORDINATES: protein motif:HMM:NF012424.2
GO:0016746 - acyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013608134.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: protein motif:HMM:TIGR01313.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046316 - gluconokinase activity [Evidence IEA]
GO:0046177 - D-gluconate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014624063.1
GO:0050043 - lactate racemase activity [Evidence IEA]
lactate racemase domain-containing protein
COORDINATES: protein motif:HMM:NF015971.2
COORDINATES: similar to AA sequence:RefSeq:WP_020610979.1
COORDINATES: protein motif:HMM:NF016084.2
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
COORDINATES: similar to AA sequence:RefSeq:WP_013608628.1
tripartite tricarboxylate transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013314956.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013252755.1
COORDINATES: similar to AA sequence:RefSeq:WP_006189476.1
COORDINATES: similar to AA sequence:RefSeq:WP_020612166.1
COORDINATES: similar to AA sequence:RefSeq:WP_014270140.1
COORDINATES: similar to AA sequence:RefSeq:WP_020612164.1
COORDINATES: protein motif:HMM:NF027338.2
GO:0030246 - carbohydrate binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0016052 - carbohydrate catabolic process [Evidence IEA]
carbohydrate-binding family 9-like protein
COORDINATES: similar to AA sequence:RefSeq:WP_014455993.1
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013255755.1
COORDINATES: protein motif:HMM:NF010738.0
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013313727.1
COORDINATES: similar to AA sequence:RefSeq:WP_013255761.1
GO:0015031 - protein transport [Evidence IEA]
MotA/TolQ/ExbB proton channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020614329.1
COORDINATES: similar to AA sequence:RefSeq:WP_020614328.1
COORDINATES: similar to AA sequence:RefSeq:WP_020614326.1
COORDINATES: similar to AA sequence:RefSeq:WP_014456009.1
GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002684828.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013608476.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020612032.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_013944894.1
COORDINATES: similar to AA sequence:RefSeq:WP_016526179.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008882649.1
COORDINATES: similar to AA sequence:RefSeq:WP_006188390.1
COORDINATES: similar to AA sequence:RefSeq:WP_002705985.1
COORDINATES: similar to AA sequence:RefSeq:WP_013967879.1
COORDINATES: similar to AA sequence:RefSeq:WP_013740290.1
COORDINATES: similar to AA sequence:RefSeq:WP_002670026.1
COORDINATES: similar to AA sequence:RefSeq:WP_013253568.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010259343.1
COORDINATES: similar to AA sequence:RefSeq:WP_002557082.1
COORDINATES: similar to AA sequence:RefSeq:WP_002700872.1
COORDINATES: similar to AA sequence:RefSeq:WP_010259353.1
COORDINATES: similar to AA sequence:RefSeq:WP_010881646.1
COORDINATES: similar to AA sequence:RefSeq:WP_006188379.1
COORDINATES: similar to AA sequence:RefSeq:WP_012422249.1
COORDINATES: similar to AA sequence:RefSeq:WP_013313313.1
COORDINATES: similar to AA sequence:RefSeq:WP_010259365.1
COORDINATES: similar to AA sequence:RefSeq:WP_013253558.1
COORDINATES: similar to AA sequence:RefSeq:WP_013253557.1
COORDINATES: similar to AA sequence:RefSeq:WP_020612045.1
COORDINATES: similar to AA sequence:RefSeq:WP_020612046.1
COORDINATES: similar to AA sequence:RefSeq:WP_014023708.1
COORDINATES: similar to AA sequence:RefSeq:WP_020612048.1
COORDINATES: similar to AA sequence:RefSeq:WP_013967860.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012422241.1
COORDINATES: similar to AA sequence:RefSeq:WP_016523252.1
COORDINATES: similar to AA sequence:RefSeq:WP_012538144.1
COORDINATES: similar to AA sequence:RefSeq:WP_014624186.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_014454646.1
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_014454645.1
COORDINATES: similar to AA sequence:RefSeq:WP_014454644.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018527799.1
COORDINATES: similar to AA sequence:RefSeq:WP_013313296.1
COORDINATES: similar to AA sequence:RefSeq:WP_013253542.1
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_014270739.1
COORDINATES: similar to AA sequence:RefSeq:WP_013702581.1
COORDINATES: protein motif:HMM:NF014801.2
COORDINATES: similar to AA sequence:RefSeq:WP_013253166.1
GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014647.2
COORDINATES: similar to AA sequence:RefSeq:WP_013256245.1
GO:0005436 - sodium:phosphate symporter activity [Evidence IEA]
GO:0044341 - sodium-dependent phosphate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013314566.1
COORDINATES: similar to AA sequence:RefSeq:WP_013739668.1
GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024686.2
chitobiase/beta-hexosaminidase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF001299.0
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000210 - NAD+ diphosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002680241.1
COORDINATES: protein motif:HMM:NF024060.2
COORDINATES: protein motif:HMM:NF019912.2
COORDINATES: similar to AA sequence:RefSeq:WP_015708747.1
COORDINATES: similar to AA sequence:RefSeq:WP_013255336.1
COORDINATES: protein motif:HMM:NF014762.2
metal-dependent transcriptional regulator
COORDINATES: protein motif:HMM:NF021903.2
dihydroorotate dehydrogenase electron transfer subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014625682.1
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013255342.1
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020614722.1
COORDINATES: similar to AA sequence:RefSeq:WP_013256114.1
GO:0030612 - arsenate reductase (thioredoxin) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022766.2
COORDINATES: protein motif:HMM:NF014443.2
GO:0015379 - potassium:chloride symporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002697063.1
COORDINATES: protein motif:HMM:NF013766.2
COORDINATES: protein motif:HMM:TIGR00738.1
COORDINATES: similar to AA sequence:RefSeq:WP_015710527.1
GO:0004124 - cysteine synthase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013969363.1
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
COORDINATES: protein motif:HMM:TIGR01254.1
thiamine ABC transporter substrate binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013255513.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020612246.1
xanthine dehydrogenase family protein molybdopterin-binding subunit
COORDINATES: protein motif:HMM:NF014626.2
GO:0008233 - peptidase activity [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0018142 - protein-DNA covalent cross-linking [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03025.1
COORDINATES: similar to AA sequence:RefSeq:WP_018526605.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757471.1
COORDINATES: protein motif:HMM:NF014097.2
NrpR regulatory domain-containing protein
COORDINATES: protein motif:HMM:NF008722.0
COORDINATES: similar to AA sequence:RefSeq:WP_014454437.1
GO:0009331 - glycerol-3-phosphate dehydrogenase complex [Evidence IEA]
GO:0047952 - glycerol-3-phosphate dehydrogenase [NAD(P)+] activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO:0046167 - glycerol-3-phosphate biosynthetic process [Evidence IEA]
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF012975.2
GO:0004540 - ribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF015672.2
COORDINATES: similar to AA sequence:RefSeq:WP_006785401.1
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
COORDINATES: similar to AA sequence:RefSeq:WP_013255326.1
COORDINATES: similar to AA sequence:RefSeq:WP_018526049.1
COORDINATES: similar to AA sequence:RefSeq:WP_013255611.1
GO:0000175 - 3'-5'-exoribonuclease activity [Evidence IEA]; GO:0008852 - exodeoxyribonuclease I activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013213.2
COORDINATES: similar to AA sequence:RefSeq:WP_014269446.1
tRNA threonylcarbamoyladenosine dehydratase
COORDINATES: protein motif:HMM:TIGR01893.1
COORDINATES: protein motif:HMM:TIGR00546.1
GO:0016410 - N-acyltransferase activity [Evidence IEA]
GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]; GO:0006497 - protein lipidation [Evidence IEA]
COORDINATES: protein motif:HMM:NF004421.0
GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020037.2
COORDINATES: similar to AA sequence:RefSeq:WP_002691058.1
formylglycine-generating enzyme family protein
COORDINATES: protein motif:HMM:NF015412.2
GO:0033735 - aspartate dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019874.2
COORDINATES: protein motif:HMM:NF019314.2
COORDINATES: protein motif:HMM:NF024771.2
COORDINATES: similar to AA sequence:RefSeq:WP_020614371.1
COORDINATES: similar to AA sequence:RefSeq:WP_013256534.1
COORDINATES: protein motif:HMM:NF019335.2
GO:0015267 - channel activity [Evidence IEA]
GO:0015891 - siderophore transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015506.2
GO:0015291 - secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015820.2
COORDINATES: protein motif:HMM:NF041384.1
COORDINATES: protein motif:HMM:NF008750.0
COORDINATES: similar to AA sequence:RefSeq:WP_020613293.1
COORDINATES: protein motif:HMM:NF007494.0
COORDINATES: similar to AA sequence:RefSeq:WP_009105933.1
COORDINATES: similar to AA sequence:RefSeq:WP_020612836.1
COORDINATES: protein motif:HMM:NF008712.1
COORDINATES: similar to AA sequence:RefSeq:WP_014269092.1
LytTR family DNA-binding domain-containing protein
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
LytS/YhcK type 5TM receptor domain-containing protein
COORDINATES: protein motif:HMM:NF012804.2
class II aldolase/adducin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013607370.1
COORDINATES: similar to AA sequence:RefSeq:WP_020613086.1
GO:0045152 - antisigma factor binding [Evidence IEA]
This anti-anti-sigma factor, or anti-sigma factor antagonist, belongs to a family that includes characterized members SpoIIAA, RsbV, RsfA, and RsfB; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_020612144.1
COORDINATES: protein motif:HMM:NF019819.2
COORDINATES: protein motif:HMM:NF025064.2
COORDINATES: protein motif:HMM:NF018649.2
COORDINATES: protein motif:HMM:NF014690.2
GO:0043772 - acyl-phosphate glycerol-3-phosphate acyltransferase activity [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]; GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013431.2
COORDINATES: protein motif:HMM:NF019559.2
COORDINATES: similar to AA sequence:RefSeq:WP_013970003.1
GO:0008725 - DNA-3-methyladenine glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF019474.2
COORDINATES: protein motif:HMM:NF013530.2
COORDINATES: similar to AA sequence:RefSeq:WP_013738943.1
amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013255866.1
COORDINATES: similar to AA sequence:RefSeq:WP_009103928.1
COORDINATES: protein motif:HMM:NF012885.2
COORDINATES: similar to AA sequence:RefSeq:WP_020611288.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012377.2
COORDINATES: protein motif:HMM:TIGR01813.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013256152.1
COORDINATES: similar to AA sequence:RefSeq:WP_013256154.1
COORDINATES: protein motif:HMM:NF013086.2
COORDINATES: protein motif:HMM:NF012927.2
COORDINATES: protein motif:HMM:NF009386.0
COORDINATES: similar to AA sequence:RefSeq:WP_013606842.1
COORDINATES: protein motif:HMM:NF020475.2
COORDINATES: similar to AA sequence:RefSeq:WP_013607826.1
COORDINATES: similar to AA sequence:RefSeq:WP_013608369.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013739953.1
COORDINATES: protein motif:HMM:NF022441.2
COORDINATES: similar to AA sequence:RefSeq:WP_010261941.1
NAD(P)H-dependent oxidoreductase subunit E
COORDINATES: similar to AA sequence:RefSeq:WP_010261943.1
NADH-ubiquinone oxidoreductase-F iron-sulfur binding region domain-containing protein
COORDINATES: protein motif:HMM:TIGR02512.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016695 - oxidoreductase activity, acting on hydrogen as donor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013967615.1
sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018526717.1
GO:0004355 - glutamate synthase (NADPH) activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013759423.1
COORDINATES: protein motif:HMM:NF014904.2
[Fe-Fe] hydrogenase large subunit C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024303.2
COORDINATES: protein motif:HMM:NF012305.2
COORDINATES: similar to AA sequence:RefSeq:WP_014268812.1
COORDINATES: similar to AA sequence:RefSeq:WP_013314676.1
COORDINATES: similar to AA sequence:RefSeq:WP_020612025.1
malic enzyme-like NAD(P)-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016526044.1
COORDINATES: protein motif:HMM:TIGR01098.1
phosphate/phosphite/phosphonate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF037997.1
COORDINATES: similar to AA sequence:RefSeq:WP_010258137.1
galactose/methyl galactoside ABC transporter permease MglC
COORDINATES: similar to AA sequence:RefSeq:WP_018527739.1
COORDINATES: similar to AA sequence:RefSeq:WP_014270492.1
GO:0030246 - carbohydrate binding [Evidence IEA]
galactose ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF037653.2
COORDINATES: similar to AA sequence:RefSeq:WP_016518369.1
COORDINATES: similar to AA sequence:RefSeq:WP_016524117.1
COORDINATES: protein motif:HMM:NF024739.2
COORDINATES: protein motif:HMM:NF014173.2
COORDINATES: protein motif:HMM:NF024212.2
COORDINATES: similar to AA sequence:RefSeq:WP_015712531.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: protein motif:HMM:NF012610.2
COORDINATES: protein motif:HMM:TIGR00695.1
GO:0008927 - mannonate dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024436.2
COORDINATES: protein motif:HMM:NF012457.2
GO:0008422 - beta-glucosidase activity [Evidence IEA]
GO:0030245 - cellulose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013968148.1
GO:0008890 - glycine C-acetyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013968355.1
GO:0008743 - L-threonine 3-dehydrogenase activity [Evidence IEA]
GO:0006567 - threonine catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024241.2
COORDINATES: similar to AA sequence:RefSeq:WP_002290364.1
GO:0004645 - 1,4-alpha-oligoglucan phosphorylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016292653.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016646 - oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF015724.2
COORDINATES: protein motif:HMM:NF014248.2
COORDINATES: protein motif:HMM:TIGR00763.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015709983.1
COORDINATES: similar to AA sequence:RefSeq:WP_013314859.1
3-isopropylmalate dehydratase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_010263625.1
3-isopropylmalate dehydratase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013255515.1
GO:0015205 - nucleobase transmembrane transporter activity [Evidence IEA]
nucleobase:cation symporter-2 family protein
COORDINATES: protein motif:HMM:NF017434.2
COORDINATES: similar to AA sequence:RefSeq:NP_308156.2
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014624249.1
COORDINATES: similar to AA sequence:RefSeq:WP_013313377.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013740354.1
COORDINATES: protein motif:HMM:TIGR01981.1
COORDINATES: protein motif:HMM:TIGR01979.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0006534 - cysteine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019205.2
COORDINATES: similar to AA sequence:RefSeq:WP_014624255.1
SUF system NifU family Fe-S cluster assembly protein
COORDINATES: protein motif:HMM:NF016041.2
COORDINATES: protein motif:HMM:TIGR02727.1
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF009881.0
COORDINATES: similar to AA sequence:RefSeq:WP_013253887.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016523077.1
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
ATP-dependent Clp endopeptidase proteolytic subunit ClpP
COORDINATES: similar to AA sequence:RefSeq:WP_014624261.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
COORDINATES: similar to AA sequence:RefSeq:WP_014455211.1
COORDINATES: similar to AA sequence:RefSeq:WP_020613828.1
COORDINATES: similar to AA sequence:RefSeq:WP_013968195.1
COORDINATES: similar to AA sequence:RefSeq:WP_013967674.1
COORDINATES: similar to AA sequence:RefSeq:WP_015712786.1
COORDINATES: protein motif:HMM:NF024091.2
COORDINATES: protein motif:HMM:NF021351.2
COORDINATES: protein motif:HMM:NF025598.2
COORDINATES: protein motif:HMM:NF003641.0
GO:0004042 - acetyl-CoA:L-glutamate N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00706.1
GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010882454.1
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013255506.1
COORDINATES: similar to AA sequence:RefSeq:WP_020612252.1
COORDINATES: protein motif:HMM:TIGR02254.1
GO:0008253 - 5'-nucleotidase activity [Evidence IEA]
YjjG family noncanonical pyrimidine nucleotidase
COORDINATES: similar to AA sequence:RefSeq:WP_013606112.1
COORDINATES: similar to AA sequence:RefSeq:WP_013254880.1
trans-2-enoyl-CoA reductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015708805.1
COORDINATES: similar to AA sequence:RefSeq:WP_014625761.1
COORDINATES: similar to AA sequence:RefSeq:WP_013969453.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]
3-oxoacyl-[acyl-carrier-protein] reductase
COORDINATES: protein motif:HMM:NF012901.2
GO:0004314 - [acyl-carrier-protein] S-malonyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014454352.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0016746 - acyltransferase activity [Evidence IEA]; GO:0033818 - beta-ketoacyl-acyl-carrier-protein synthase III activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013312915.1
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015817.2
DbpA RNA binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016524677.1
TraR/DksA family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_016524676.1
COORDINATES: protein motif:HMM:NF013844.2
COORDINATES: similar to AA sequence:RefSeq:WP_013253067.1
COORDINATES: protein motif:HMM:NF014065.2
bifunctional ornithine acetyltransferase/N-acetylglutamate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_020611218.1
COORDINATES: protein motif:HMM:NF014680.2
COORDINATES: similar to AA sequence:RefSeq:WP_013739246.1
COORDINATES: protein motif:HMM:NF015338.2
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010695168.1
ATP-dependent Clp protease proteolytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_016518508.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002698365.1
GO:0017101 - aminoacyl-tRNA synthetase multienzyme complex [Evidence IEA]
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00413.1
septal ring lytic transglycosylase RlpA family protein
COORDINATES: protein motif:HMM:NF024919.2
COORDINATES: similar to AA sequence:RefSeq:WP_014455009.1
COORDINATES: similar to AA sequence:RefSeq:WP_014456167.1
COORDINATES: protein motif:HMM:NF015637.2
COORDINATES: protein motif:HMM:NF025033.2
COORDINATES: protein motif:HMM:NF012581.2
proton-conducting transporter membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014269975.1
COORDINATES: protein motif:HMM:NF015970.2
COORDINATES: similar to AA sequence:RefSeq:WP_014269973.1
COORDINATES: protein motif:HMM:NF015302.2
monovalent cation/H(+) antiporter subunit G
COORDINATES: similar to AA sequence:RefSeq:WP_014269971.1
GO:0015075 - monoatomic ion transmembrane transporter activity [Evidence IEA]
GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
monovalent cation/H+ antiporter complex subunit F
COORDINATES: protein motif:HMM:NF014012.2
COORDINATES: similar to AA sequence:RefSeq:WP_014269968.1
COORDINATES: protein motif:HMM:NF024319.2
COORDINATES: protein motif:HMM:TIGR02315.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0015416 - ABC-type phosphonate transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0015716 - organic phosphonate transport [Evidence IEA]
phosphonate ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:TIGR01097.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015416 - ABC-type phosphonate transporter activity [Evidence IEA]
phosphonate ABC transporter, permease protein PhnE
COORDINATES: protein motif:HMM:NF013440.2
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: protein motif:HMM:NF015325.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012621.2
heavy-metal-associated domain-containing protein
COORDINATES: protein motif:HMM:NF015048.2
GO:0047617 - acyl-CoA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013606405.1
COORDINATES: protein motif:HMM:TIGR01887.1
GO:0016805 - dipeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
Sapep family Mn(2+)-dependent dipeptidase
COORDINATES: similar to AA sequence:RefSeq:WP_016293002.1
COORDINATES: protein motif:HMM:NF018305.2
COORDINATES: protein motif:HMM:NF018682.2
four-carbon acid sugar kinase family protein
COORDINATES: protein motif:HMM:NF016232.2
COORDINATES: protein motif:HMM:NF015581.2
COORDINATES: protein motif:HMM:NF016488.2
COORDINATES: protein motif:HMM:NF024989.2
COORDINATES: protein motif:HMM:NF013340.2
COORDINATES: protein motif:HMM:NF011635.0
GO:0004096 - catalase activity [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012964.2
GO:0004325 - ferrochelatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF028178.2
COORDINATES: protein motif:HMM:NF019237.2
COORDINATES: protein motif:HMM:NF015347.2
BspA family leucine-rich repeat surface protein
COORDINATES: similar to AA sequence:RefSeq:WP_016526484.1
COORDINATES: protein motif:HMM:NF018757.2
COORDINATES: similar to AA sequence:RefSeq:WP_013739860.1
COORDINATES: similar to AA sequence:RefSeq:WP_013739861.1
COORDINATES: similar to AA sequence:RefSeq:WP_014271620.1
COORDINATES: similar to AA sequence:RefSeq:WP_013739863.1
autoinducer 2 ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_010261866.1
RpiB/LacA/LacB family sugar-phosphate isomerase
COORDINATES: protein motif:HMM:NF025636.2
TetR/AcrR family transcriptional regulator C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013757299.1
COORDINATES: similar to AA sequence:RefSeq:WP_002698581.1
COORDINATES: similar to AA sequence:RefSeq:WP_020610810.1
COORDINATES: similar to AA sequence:RefSeq:WP_013606386.1
COORDINATES: protein motif:HMM:TIGR00326.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]; GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [Evidence IEA]
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
COORDINATES: protein motif:HMM:TIGR00187.1
COORDINATES: protein motif:HMM:TIGR00506.1
GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009104218.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021431.2
type II toxin-antitoxin system HigB family toxin
COORDINATES: protein motif:HMM:NF017206.2
glycine betaine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016290052.1
COORDINATES: similar to AA sequence:RefSeq:WP_020612087.1
COORDINATES: protein motif:HMM:TIGR03545.1
COORDINATES: protein motif:HMM:NF023277.2
COORDINATES: similar to AA sequence:RefSeq:WP_014623804.1
GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014456359.1
COORDINATES: protein motif:HMM:TIGR01621.1
COORDINATES: protein motif:HMM:NF012481.2
COORDINATES: protein motif:HMM:NF004825.0
COORDINATES: protein motif:HMM:NF013479.2
EscU/YscU/HrcU family type III secretion system export apparatus switch protein
COORDINATES: protein motif:HMM:TIGR01909.1
COORDINATES: protein motif:HMM:NF012242.2
COORDINATES: similar to AA sequence:RefSeq:WP_013255691.1
COORDINATES: protein motif:HMM:NF021507.2
phosphodiester glycosidase family protein
COORDINATES: protein motif:HMM:TIGR00530.1
NrtA/SsuA/CpmA family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_020614069.1
COORDINATES: protein motif:HMM:NF021172.2
COORDINATES: similar to AA sequence:RefSeq:WP_018525430.1
COORDINATES: protein motif:HMM:NF023164.2
COORDINATES: protein motif:HMM:NF022439.2
COORDINATES: similar to AA sequence:RefSeq:WP_020611118.1
COORDINATES: protein motif:HMM:NF019322.2
COORDINATES: similar to AA sequence:RefSeq:WP_006637136.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0031419 - cobalamin binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
B12-binding domain-containing radical SAM protein
COORDINATES: similar to AA sequence:RefSeq:WP_013256606.1
LamG-like jellyroll fold domain-containing protein
COORDINATES: protein motif:HMM:NF024816.2
COORDINATES: similar to AA sequence:RefSeq:WP_013314973.1
GO:0050797 - thymidylate synthase (FAD) activity [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00257.1
COORDINATES: similar to AA sequence:RefSeq:WP_002693107.1
GO:0004555 - alpha,alpha-trehalase activity [Evidence IEA]
GO:0005991 - trehalose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010697335.1
COORDINATES: protein motif:HMM:NF014616.2
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_020611289.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
COORDINATES: protein motif:HMM:NF027638.2
COORDINATES: similar to AA sequence:RefSeq:WP_002676975.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_002700565.1
COORDINATES: similar to AA sequence:RefSeq:WP_010256036.1
COORDINATES: similar to AA sequence:RefSeq:WP_018527014.1
GO:0004000 - adenosine deaminase activity [Evidence IEA]
GO:0043101 - purine-containing compound salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014456873.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit A
COORDINATES: similar to AA sequence:RefSeq:WP_020613792.1
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_015706206.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
chromosomal replication initiator protein DnaA
COORDINATES: similar to AA sequence:RefSeq:WP_002666474.1
COORDINATES: protein motif:HMM:TIGR00611.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.; All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF017103.2
COORDINATES: similar to AA sequence:RefSeq:WP_002667651.1
COORDINATES: protein motif:HMM:TIGR00188.1
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002474682.1
membrane protein insertion efficiency factor YidD
COORDINATES: protein motif:HMM:TIGR03593.1
GO:0051205 - protein insertion into membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013967493.1
GO:0051510 - regulation of unidimensional cell growth [Evidence IEA]
RNA-binding cell elongation regulator Jag/EloR
COORDINATES: similar to AA sequence:RefSeq:WP_013312871.1
GO:0004795 - threonine synthase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010698679.1
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:NF012698.2
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013759358.1
COORDINATES: protein motif:HMM:NF016102.2
COORDINATES: protein motif:HMM:NF015748.2
WecB/TagA/CpsF family glycosyltransferase
COORDINATES: protein motif:HMM:TIGR00046.1
COORDINATES: similar to AA sequence:RefSeq:WP_002697534.1
secondary thiamine-phosphate synthase enzyme YjbQ
COORDINATES: similar to AA sequence:RefSeq:WP_014456784.1
COORDINATES: similar to AA sequence:RefSeq:WP_006189817.1
COORDINATES: similar to AA sequence:RefSeq:WP_013312852.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: similar to AA sequence:RefSeq:WP_018525686.1
COORDINATES: protein motif:HMM:NF021529.2
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]; GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012593.2
cation:dicarboxylase symporter family transporter
COORDINATES: protein motif:HMM:NF012334.2
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_013968412.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF026253.2
COORDINATES: similar to AA sequence:RefSeq:WP_014625596.1
GO:0004151 - dihydroorotase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00007.1
GO:0003949 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase activity [Evidence IEA]
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
COORDINATES: protein motif:HMM:NF013654.2
GO:0004636 - phosphoribosyl-ATP diphosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013967616.1
COORDINATES: similar to AA sequence:RefSeq:WP_014454223.1
COORDINATES: similar to AA sequence:RefSeq:WP_012539089.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0004808 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]; GO:0002143 - tRNA wobble position uridine thiolation [Evidence IEA]
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF015925.2
COORDINATES: protein motif:HMM:TIGR00196.1
GO:0052855 - ADP-dependent NAD(P)H-hydrate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020614140.1
COORDINATES: similar to AA sequence:RefSeq:WP_020613785.1
COORDINATES: similar to AA sequence:RefSeq:WP_006188663.1
COORDINATES: protein motif:HMM:NF012387.2
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
FKBP-type peptidyl-prolyl cis-trans isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_015709565.1
COORDINATES: protein motif:HMM:TIGR00468.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
phenylalanine--tRNA ligase subunit alpha
COORDINATES: protein motif:HMM:TIGR00472.1
COORDINATES: protein motif:HMM:TIGR00636.1
COORDINATES: protein motif:HMM:NF012863.2
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: protein motif:HMM:TIGR00619.1
GO:0004527 - exonuclease activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03527.1
sulfurtransferase-like selenium metabolism protein YedF
COORDINATES: protein motif:HMM:NF023251.2
COORDINATES: similar to AA sequence:RefSeq:WP_020612259.1
GO:0004756 - selenide, water dikinase activity [Evidence IEA]
GO:0001887 - selenium compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03309.1
selenium-dependent molybdenum cofactor biosynthesis protein YqeB
COORDINATES: protein motif:HMM:TIGR03172.2
selenium cofactor biosynthesis protein YqeC
COORDINATES: similar to AA sequence:RefSeq:WP_014269004.1
COORDINATES: protein motif:HMM:NF015451.2
aminoacetone oxidase family FAD-binding enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_018526676.1
COORDINATES: protein motif:HMM:NF033855.1
GO:0016645 - oxidoreductase activity, acting on the CH-NH group of donors [Evidence IEA]
tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD
COORDINATES: similar to AA sequence:RefSeq:WP_020614197.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013862.2
COORDINATES: protein motif:HMM:NF023223.2
COORDINATES: protein motif:HMM:NF024947.2
COORDINATES: protein motif:HMM:NF025205.2
COORDINATES: protein motif:HMM:NF023283.2
COORDINATES: similar to AA sequence:RefSeq:WP_015707021.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004521 - endoribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
type II toxin-antitoxin system PemK/MazF family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_013970237.1
COORDINATES: protein motif:HMM:NF013828.2
COORDINATES: similar to AA sequence:RefSeq:WP_076612134.1
COORDINATES: protein motif:HMM:NF013539.2
COORDINATES: protein motif:HMM:NF014009.2
COORDINATES: protein motif:HMM:TIGR00149.1
COORDINATES: protein motif:HMM:NF003302.0
COORDINATES: protein motif:HMM:NF016777.2
COORDINATES: protein motif:HMM:NF014649.2
COORDINATES: protein motif:HMM:TIGR01892.1
GO:0008777 - acetylornithine deacetylase activity [Evidence IEA]
programmed frameshift; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013606198.1
COORDINATES: similar to AA sequence:RefSeq:WP_013606199.1
COORDINATES: similar to AA sequence:RefSeq:WP_013606200.1
COORDINATES: similar to AA sequence:RefSeq:WP_013606201.1
COORDINATES: similar to AA sequence:RefSeq:WP_014270117.1
GO:0008679 - 2-hydroxy-3-oxopropionate reductase activity [Evidence IEA]
GO:0046487 - glyoxylate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013116.2
COORDINATES: similar to AA sequence:RefSeq:WP_013606204.1
COORDINATES: similar to AA sequence:RefSeq:WP_013970144.1
COORDINATES: similar to AA sequence:RefSeq:WP_020612562.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757880.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0008983 - protein-glutamate O-methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
protein-glutamate O-methyltransferase CheR
COORDINATES: similar to AA sequence:RefSeq:WP_013702504.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015920 - lipopolysaccharide transport [Evidence IEA]
LPS export ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013256586.1
COORDINATES: protein motif:HMM:TIGR00741.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: similar to AA sequence:RefSeq:WP_014456677.1
GO:0016791 - phosphatase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020612571.1
COORDINATES: similar to AA sequence:RefSeq:WP_013256592.1
COORDINATES: similar to AA sequence:RefSeq:WP_018527699.1
GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01128.1
COORDINATES: similar to AA sequence:RefSeq:WP_014270657.1
COORDINATES: similar to AA sequence:RefSeq:WP_013759440.1
COORDINATES: similar to AA sequence:RefSeq:WP_015706533.1
COORDINATES: similar to AA sequence:RefSeq:WP_020611086.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF021445.2
phosphatidylglycerol lysyltransferase domain-containing protein
COORDINATES: protein motif:HMM:TIGR03403.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013738.2
GO:0005506 - iron ion binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
iron-sulfur cluster assembly scaffold protein
COORDINATES: protein motif:HMM:NF013741.2
COORDINATES: similar to AA sequence:RefSeq:WP_013252905.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014271207.1
COORDINATES: similar to AA sequence:RefSeq:WP_020614608.1
GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010258045.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013312977.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: protein motif:HMM:NF016223.2
flagellar biosynthesis anti-sigma factor FlgM
COORDINATES: similar to AA sequence:RefSeq:WP_013252939.1
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015709274.1
COORDINATES: similar to AA sequence:RefSeq:WP_014454337.1
GO:0051540 - metal cluster binding [Evidence IEA]
Nif3-like dinuclear metal center hexameric protein
COORDINATES: similar to AA sequence:RefSeq:WP_002700611.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013252945.1
COORDINATES: protein motif:HMM:NF040105.1
COORDINATES: similar to AA sequence:RefSeq:WP_010263954.1
transglutaminase-like domain-containing protein
COORDINATES: protein motif:HMM:NF013316.2
COORDINATES: protein motif:HMM:NF002346.0
COORDINATES: protein motif:HMM:TIGR00367.1
GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015712376.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0140078 - class I DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013314673.1
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
COORDINATES: protein motif:HMM:NF013308.2
GO:0070567 - cytidylyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015712352.1
COORDINATES: similar to AA sequence:RefSeq:WP_014455331.1
GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity [Evidence IEA]
decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase
COORDINATES: protein motif:HMM:NF002730.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004359 - glutaminase activity [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
lytic transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013256369.1
GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002697044.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0015616 - DNA translocase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013606246.1
sodium ion-translocating decarboxylase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_014625764.1
COORDINATES: similar to AA sequence:RefSeq:WP_013314923.1
COORDINATES: protein motif:HMM:NF024895.2
COORDINATES: protein motif:HMM:NF017076.2
COORDINATES: protein motif:HMM:NF017044.2
COORDINATES: protein motif:HMM:NF021438.2
COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1
GO:0004455 - ketol-acid reductoisomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013283.2
GO:0019867 - outer membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013253188.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: protein motif:HMM:TIGR01212.1
This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024875.2
4Fe-4S double cluster binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002672925.1
COORDINATES: similar to AA sequence:RefSeq:WP_020611743.1
COORDINATES: similar to AA sequence:RefSeq:WP_013253903.1
COORDINATES: similar to AA sequence:RefSeq:WP_013970157.1
COORDINATES: similar to AA sequence:RefSeq:WP_013607409.1
GO:0019239 - deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013606240.1
COORDINATES: similar to AA sequence:RefSeq:WP_014270061.1
COORDINATES: similar to AA sequence:RefSeq:WP_013606238.1
COORDINATES: similar to AA sequence:RefSeq:WP_020614055.1
COORDINATES: similar to AA sequence:RefSeq:WP_014271076.1
COORDINATES: similar to AA sequence:RefSeq:WP_013256234.1
(2Fe-2S) ferredoxin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014456421.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoF
COORDINATES: similar to AA sequence:RefSeq:WP_020614051.1
NADH-dependent [FeFe] hydrogenase, group A6
COORDINATES: protein motif:HMM:NF025343.2
COORDINATES: protein motif:HMM:NF039707.1
COORDINATES: similar to AA sequence:RefSeq:WP_013606801.1
COORDINATES: protein motif:HMM:NF025380.2
COORDINATES: protein motif:HMM:NF014939.2
GO:0016730 - oxidoreductase activity, acting on iron-sulfur proteins as donors [Evidence IEA]
ferredoxin-thioredoxin reductase catalytic domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013254060.1
hybrid sensor histidine kinase/response regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014269805.1
bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH
COORDINATES: similar to AA sequence:RefSeq:WP_014455387.1
COORDINATES: protein motif:HMM:NF033749.1
COORDINATES: similar to AA sequence:RefSeq:WP_020612124.1
COORDINATES: similar to AA sequence:RefSeq:WP_013314668.1
transglycosylase SLT domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014625518.1
COORDINATES: protein motif:HMM:NF025743.2
COORDINATES: similar to AA sequence:RefSeq:WP_006784935.1
GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009102957.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF010047.0
GO:0010181 - FMN binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]; GO:0003959 - NADPH dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04456.1
COORDINATES: similar to AA sequence:RefSeq:WP_020611754.1
COORDINATES: similar to AA sequence:RefSeq:WP_014454366.1
COORDINATES: similar to AA sequence:RefSeq:WP_002694885.1
GO:0045148 - tripeptide aminopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014623961.1
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: similar to AA sequence:RefSeq:WP_013739935.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: protein motif:HMM:NF014575.2
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: similar to AA sequence:RefSeq:WP_003879762.1
GO:0016763 - pentosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002689624.1
COORDINATES: similar to AA sequence:RefSeq:WP_013256661.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
DnaB-like helicase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF025224.2
leucine-rich repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013255246.1
COORDINATES: protein motif:HMM:NF016169.2
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: protein motif:HMM:TIGR01447.1
GO:0009338 - exodeoxyribonuclease V complex [Evidence IEA]
GO:0008854 - exodeoxyribonuclease V activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013702510.1
COORDINATES: similar to AA sequence:RefSeq:WP_020612522.1
COORDINATES: protein motif:HMM:NF012933.2
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000701 - purine-specific mismatch base pair DNA N-glycosylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF028121.2
TRAP transporter TatT component family protein
TRAP transporter substrate-binding protein DctP
COORDINATES: similar to AA sequence:RefSeq:WP_013254827.1
GO:0015556 - C4-dicarboxylate transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014625598.1
COORDINATES: protein motif:HMM:NF022077.2
COORDINATES: protein motif:HMM:NF006388.0
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_013256330.1
COORDINATES: similar to AA sequence:RefSeq:WP_013606586.1
COORDINATES: similar to AA sequence:RefSeq:WP_013970119.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0009045 - xylose isomerase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010966526.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
ligand-binding sensor domain-containing diguanylate cyclase
COORDINATES: similar to AA sequence:RefSeq:WP_013255313.1
COORDINATES: similar to AA sequence:RefSeq:WP_011916063.1
COORDINATES: similar to AA sequence:RefSeq:WP_015707305.1
COORDINATES: similar to AA sequence:RefSeq:WP_002705013.1
GO:0008740 - L-rhamnose isomerase activity [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]
GO:0019299 - rhamnose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013701384.1
GO:0008720 - D-lactate dehydrogenase activity [Evidence IEA]; GO:0070404 - NADH binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013255908.1
COORDINATES: similar to AA sequence:RefSeq:WP_020610925.1
indolepyruvate oxidoreductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_013968720.1
COORDINATES: similar to AA sequence:RefSeq:WP_015708048.1
COORDINATES: similar to AA sequence:RefSeq:WP_013968722.1
COORDINATES: protein motif:HMM:NF027875.2
COORDINATES: similar to AA sequence:RefSeq:WP_015706892.1
COORDINATES: protein motif:HMM:NF012695.2
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020610995.1
COORDINATES: similar to AA sequence:RefSeq:WP_020610996.1
GO:0015837 - amine transport [Evidence IEA]
The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc.; The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc.; The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013255858.1
COORDINATES: similar to AA sequence:RefSeq:WP_013255857.1
COORDINATES: similar to AA sequence:RefSeq:WP_014269926.1
COORDINATES: similar to AA sequence:RefSeq:WP_020611619.1
COORDINATES: protein motif:HMM:TIGR00768.1
GO:0016881 - acid-amino acid ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:NP_465540.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0001072 - transcription antitermination factor activity, RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024634.2
COORDINATES: protein motif:HMM:NF013097.2
COORDINATES: protein motif:HMM:NF024240.2
COORDINATES: protein motif:HMM:NF026048.2
COORDINATES: protein motif:HMM:TIGR00621.2
COORDINATES: protein motif:HMM:NF015038.2
COORDINATES: protein motif:HMM:NF033517.1
COORDINATES: protein motif:HMM:NF024408.2
IS66 family transposase zinc-finger binding domain-containing protein
COORDINATES: protein motif:HMM:NF017528.2
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: protein motif:HMM:NF026221.2
GO:0004565 - beta-galactosidase activity [Evidence IEA]
beta-galactosidase trimerization domain-containing protein
COORDINATES: protein motif:HMM:NF014841.2
COORDINATES: protein motif:HMM:NF025851.2
glycoside hydrolase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF009855.0
COORDINATES: similar to AA sequence:RefSeq:WP_013314486.1
GO:0042823 - pyridoxal phosphate biosynthetic process [Evidence IEA]
pyridoxal 5'-phosphate synthase lyase subunit PdxS
COORDINATES: similar to AA sequence:RefSeq:WP_013314487.1
pyridoxal 5'-phosphate synthase glutaminase subunit PdxT
COORDINATES: similar to AA sequence:RefSeq:WP_014270478.1
COORDINATES: similar to AA sequence:RefSeq:WP_013253660.1
COORDINATES: similar to AA sequence:RefSeq:WP_020612852.1
COORDINATES: similar to AA sequence:RefSeq:WP_013253938.1
COORDINATES: similar to AA sequence:RefSeq:WP_014271245.1
COORDINATES: similar to AA sequence:RefSeq:WP_013253939.1
COORDINATES: protein motif:HMM:NF012904.2
GO:0009436 - glyoxylate catabolic process [Evidence IEA]; GO:0071704 - organic substance metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013606402.1
COORDINATES: protein motif:HMM:NF015297.2
COORDINATES: similar to AA sequence:RefSeq:WP_003024889.1
COORDINATES: similar to AA sequence:RefSeq:WP_013605875.1
COORDINATES: protein motif:HMM:NF013696.2
COORDINATES: similar to AA sequence:RefSeq:WP_002700782.1
COORDINATES: similar to AA sequence:RefSeq:WP_014268925.1
COORDINATES: protein motif:HMM:TIGR02121.1
GO:0005298 - proline:sodium symporter activity [Evidence IEA]
GO:0015824 - proline transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015239.2
GO:0017111 - ribonucleoside triphosphate phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013255504.1
COORDINATES: protein motif:HMM:NF017466.2
sugar diacid recognition domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013969469.1
COORDINATES: similar to AA sequence:RefSeq:WP_015706947.1
COORDINATES: similar to AA sequence:RefSeq:WP_013968403.1
COORDINATES: protein motif:HMM:TIGR02093.1
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_018526408.1
GO:0004412 - homoserine dehydrogenase activity [Evidence IEA]
penicillin-binding protein activator LpoB
COORDINATES: protein motif:HMM:NF013630.2
COORDINATES: similar to AA sequence:RefSeq:WP_014624939.1
GO:0016857 - racemase and epimerase activity, acting on carbohydrates and derivatives [Evidence IEA]
GO:0019301 - rhamnose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014271186.1
COORDINATES: similar to AA sequence:RefSeq:WP_013607898.1
COORDINATES: similar to AA sequence:RefSeq:WP_014624942.1
COORDINATES: similar to AA sequence:RefSeq:WP_014624943.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0033296 - rhamnose binding [Evidence IEA]; GO:0015153 - rhamnose transmembrane transporter activity [Evidence IEA]
GO:0015762 - rhamnose transmembrane transport [Evidence IEA]
rhamnose ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018526030.1
COORDINATES: similar to AA sequence:RefSeq:WP_020611070.1
GO:0004157 - dihydropyrimidinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013607894.1
dihydrolipoamide acetyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014271190.1
COORDINATES: similar to AA sequence:RefSeq:WP_013969402.1
alpha-ketoacid dehydrogenase subunit alpha/beta
COORDINATES: protein motif:HMM:NF012434.2
Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013607887.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757306.1
COORDINATES: similar to AA sequence:RefSeq:WP_013607885.1
COORDINATES: protein motif:HMM:NF016088.2
COORDINATES: protein motif:HMM:NF015729.2
COORDINATES: similar to AA sequence:RefSeq:WP_006187923.1
GO:0019239 - deaminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014270957.1
COORDINATES: protein motif:HMM:NF021387.2
COORDINATES: similar to AA sequence:RefSeq:WP_014625606.1
COORDINATES: similar to AA sequence:RefSeq:WP_013738903.1
COORDINATES: similar to AA sequence:RefSeq:WP_014271193.1
COORDINATES: similar to AA sequence:RefSeq:WP_014624946.1
COORDINATES: similar to AA sequence:RefSeq:WP_014271195.1
COORDINATES: similar to AA sequence:RefSeq:WP_013254903.1
GO:0016744 - transketolase or transaldolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013314705.1
GO:0016684 - oxidoreductase activity, acting on peroxide as acceptor [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014624061.1
GO:0008678 - 2-deoxy-D-gluconate 3-dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0000272 - polysaccharide catabolic process [Evidence IEA]
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD
COORDINATES: protein motif:HMM:NF014653.2
COORDINATES: similar to AA sequence:RefSeq:WP_015710437.1
COORDINATES: protein motif:HMM:NF012385.2
COORDINATES: similar to AA sequence:RefSeq:WP_013253858.1
COORDINATES: similar to AA sequence:RefSeq:WP_020613059.1
COORDINATES: similar to AA sequence:RefSeq:WP_020613060.1
COORDINATES: protein motif:HMM:NF013980.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]
SprT family zinc-dependent metalloprotease
WYL domain-containing transcriptional regulator
COORDINATES: protein motif:HMM:NF022633.2
COORDINATES: protein motif:HMM:NF016972.2
COORDINATES: protein motif:HMM:NF012475.2
COORDINATES: similar to AA sequence:RefSeq:WP_013253987.1
COORDINATES: similar to AA sequence:RefSeq:WP_013253988.1
COORDINATES: similar to AA sequence:RefSeq:WP_018526327.1
COORDINATES: similar to AA sequence:RefSeq:WP_014269030.1
GO:0005507 - copper ion binding [Evidence IEA]
GO:0055070 - copper ion homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014269032.1
COORDINATES: protein motif:HMM:TIGR00099.1
COORDINATES: similar to AA sequence:RefSeq:WP_013606870.1
GO:0046912 - acyltransferase activity, acyl groups converted into alkyl on transfer [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00022.1
COORDINATES: protein motif:HMM:NF021778.2
COORDINATES: protein motif:HMM:NF020135.2
ketopantoate reductase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014601.2
2-dehydropantoate 2-reductase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016291214.1
COORDINATES: similar to AA sequence:RefSeq:WP_013608214.1
COORDINATES: similar to AA sequence:RefSeq:WP_002702824.1
COORDINATES: protein motif:HMM:NF013356.2
COORDINATES: similar to AA sequence:RefSeq:WP_016521463.1
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: protein motif:HMM:NF024938.2
COORDINATES: protein motif:HMM:NF015318.2
COORDINATES: protein motif:HMM:NF025116.2
COORDINATES: protein motif:HMM:NF013250.2
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: protein motif:HMM:NF016658.2
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: protein motif:HMM:NF021193.2
COORDINATES: similar to AA sequence:RefSeq:WP_013256619.1
COORDINATES: protein motif:HMM:NF018685.2
COORDINATES: similar to AA sequence:RefSeq:WP_014456017.1
COORDINATES: similar to AA sequence:RefSeq:WP_014455313.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: protein motif:HMM:TIGR00004.1
COORDINATES: protein motif:HMM:NF015284.2
COORDINATES: protein motif:HMM:NF033546.1
COORDINATES: similar to AA sequence:RefSeq:WP_014270325.1
COORDINATES: similar to AA sequence:RefSeq:WP_014269247.1
COORDINATES: similar to AA sequence:RefSeq:WP_014455293.1
GO:0004450 - isocitrate dehydrogenase (NADP+) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013606788.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0008652 - amino acid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF006540.0
GO:0004072 - aspartate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013408.2
COORDINATES: similar to AA sequence:RefSeq:WP_016521128.1
COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1
COORDINATES: similar to AA sequence:RefSeq:WP_015708345.1
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014269610.1
COORDINATES: protein motif:HMM:TIGR00147.1
diacylglycerol kinase family lipid kinase
COORDINATES: protein motif:HMM:NF012602.2
COORDINATES: protein motif:HMM:TIGR01251.1
GO:0002189 - ribose phosphate diphosphokinase complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006396.0
bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_013969264.1
COORDINATES: protein motif:HMM:NF013007.2
COORDINATES: protein motif:HMM:TIGR03942.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0018209 - peptidyl-serine modification [Evidence IEA]; GO:0046500 - S-adenosylmethionine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF010167.0
GO:0015833 - peptide transport [Evidence IEA]
energy-coupling factor transporter ATPase
COORDINATES: protein motif:HMM:NF024231.2
COORDINATES: similar to AA sequence:RefSeq:WP_015709920.1
COORDINATES: similar to AA sequence:RefSeq:WP_015712324.1
COORDINATES: protein motif:HMM:NF024918.2
patatin-like phospholipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013313125.1
COORDINATES: protein motif:HMM:NF013161.2
COORDINATES: protein motif:HMM:NF021568.2
COORDINATES: similar to AA sequence:RefSeq:WP_006187525.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0004611 - phosphoenolpyruvate carboxykinase activity [Evidence IEA]; GO:0017076 - purine nucleotide binding [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013256563.1
COORDINATES: similar to AA sequence:RefSeq:WP_020612346.1
GO:0006817 - phosphate ion transport [Evidence IEA]
phosphate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_020612347.1
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter permease subunit PstC
COORDINATES: protein motif:HMM:TIGR00974.1
COORDINATES: similar to AA sequence:RefSeq:WP_013702151.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: protein motif:HMM:TIGR02135.1
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: similar to AA sequence:RefSeq:WP_018527749.1
COORDINATES: protein motif:HMM:NF024774.2
adenine deaminase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014625534.1
COORDINATES: similar to AA sequence:RefSeq:WP_013314684.1
COORDINATES: similar to AA sequence:RefSeq:WP_014625536.1
COORDINATES: protein motif:HMM:NF017773.2
COORDINATES: protein motif:HMM:NF005305.0
COORDINATES: similar to AA sequence:RefSeq:WP_013969638.1
GO:0008736 - L-fucose isomerase activity [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]
GO:0019317 - fucose catabolic process [Evidence IEA]; GO:0005996 - monosaccharide metabolic process [Evidence IEA]
GO:0052621 - diguanylate cyclase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010254383.1
COORDINATES: similar to AA sequence:RefSeq:WP_013757933.1
COORDINATES: protein motif:HMM:NF015889.2
GO:0015661 - L-lysine efflux transmembrane transporter activity [Evidence IEA]
GO:1903401 - L-lysine transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014270986.1
COORDINATES: similar to AA sequence:RefSeq:WP_015712106.1
COORDINATES: similar to AA sequence:RefSeq:WP_014270974.1
COORDINATES: similar to AA sequence:RefSeq:WP_014270975.1
COORDINATES: similar to AA sequence:RefSeq:WP_014270976.1
COORDINATES: protein motif:HMM:NF012442.2
COORDINATES: protein motif:HMM:NF021231.2
COORDINATES: similar to AA sequence:RefSeq:WP_014270494.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
pyruvate:ferredoxin (flavodoxin) oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_014623915.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013255244.1
COORDINATES: protein motif:HMM:NF013790.2
COORDINATES: similar to AA sequence:RefSeq:WP_013968280.1
GO:0016872 - intramolecular lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014623850.1
COORDINATES: similar to AA sequence:RefSeq:WP_013969098.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020400.2
COORDINATES: protein motif:HMM:NF024248.2
COORDINATES: protein motif:HMM:TIGR03645.1
COORDINATES: protein motif:HMM:NF025626.2
COORDINATES: protein motif:HMM:NF018184.2
COORDINATES: protein motif:HMM:NF024769.2
COORDINATES: protein motif:HMM:NF021514.2
COORDINATES: similar to AA sequence:RefSeq:WP_013969100.1
GO:0008519 - ammonium transmembrane transporter activity [Evidence IEA]
GO:0072488 - ammonium transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014456035.1
GO:0009399 - nitrogen fixation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
nif-specific transcriptional activator NifA
COORDINATES: protein motif:HMM:NF014669.2
COORDINATES: protein motif:HMM:NF015084.2
GO:0098561 - methyl accepting chemotaxis protein complex [Evidence IEA]
COORDINATES: protein motif:HMM:NF015563.2
COORDINATES: protein motif:HMM:NF019542.2
COORDINATES: similar to AA sequence:RefSeq:WP_010692491.1
COORDINATES: protein motif:HMM:TIGR00613.1
COORDINATES: similar to AA sequence:RefSeq:WP_014455489.1
GO:0006206 - pyrimidine nucleobase metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00644.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: similar to AA sequence:RefSeq:WP_006188264.1
COORDINATES: protein motif:HMM:NF019966.2
COORDINATES: protein motif:HMM:NF024779.2
COORDINATES: protein motif:HMM:NF013006.2
NFYB/HAP3 family transcription factor subunit
GO:0001727 - lipid kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013253980.1
COORDINATES: similar to AA sequence:RefSeq:WP_014269576.1
COORDINATES: similar to AA sequence:RefSeq:WP_016293055.1
TIGR03905 family TSCPD domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018527057.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF016028.2