Chroococcidiopsis thermalis PCC 7203 plasmid pCHRO.01, complete sequence.
Bacteria; Cyanobacteriota; Cyanophyceae; Chroococcidiopsidales; Chroococcidiopsidaceae; Chroococcidiopsis.
Finished plasmid 1 of genome of Chroococcidiopsis thermalis PCC 7203
Submitted (04-JUN-2012) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP003598.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4086912\nSource DNA and Organism available from Cheryl A. Kerfeld\n(CKerfeld@lbl.gov)\nContacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov)\n Tanja Woyke (microbe@cuba.jgi-psf.org)\nWhole genome sequencing and draft assembly at JGI-PGF\nAnnotation by JGI-ORNL\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##MIGS-Data-START##\ninvestigation_type :: bacteria_archaea\nproject_name :: Chroococcidiopsis thermalis PCC 7203\ncollection_date :: 1962\nlat_lon :: 54.10114 13.3885\ndepth :: Missing\nalt_elev :: Missing\ncountry :: Germany\nenvironment :: Soil\nnum_replicons :: 3\nref_biomaterial :: PCC 7203, ATCC 27900, CCAP 1451/1\nbiotic_relationship :: Free living\ntrophic_level :: Chemoheterotroph, Photoautotroph\nrel_to_oxygen :: Aerobe\nisol_growth_condt :: Missing\nsequencing_meth :: WGS\nassembly :: Newbler v. 2.3 (pre-release), VELVET v.\n 1.0.13, Parallel phrap v. 4.24 SPS\nfinishing_strategy :: Finished\nGOLD Stamp ID :: Gi04161\nType Strain :: Yes\nFunding Program :: DOE-GEBA 2009\nIsolation Site :: soil sample, near Greifswald, East Germany\nCell Shape :: Sphere-shaped\nMotility :: Nonmotile\nSporulation :: Nonsporulating\nTemperature Range :: Mesophile\nSalinity :: Stenohaline\npH :: 7-9\nGram Staining :: Gram-\nDiseases :: None\nPhenotypes :: Photosynthetic\n##MIGS-Data-END##\n\n##Genome-Assembly-Data-START##\nFinishing Goal :: Finished\nCurrent Finishing Status :: Finished\nAssembly Method :: Newbler v. 2.3 (pre-release), VELVET v.\n 1.0.13, Parallel phrap v. 4.24 SPS\nGenome Coverage :: 30x\nSequencing Technology :: 454/Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/03/2023 01:39:46\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,221\nCDSs (total) :: 6,162\nGenes (coding) :: 6,100\nCDSs (with protein) :: 6,100\nGenes (RNA) :: 59\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 46\nncRNAs :: 4\nPseudo Genes (total) :: 62\nCDSs (without protein) :: 62\nPseudo Genes (ambiguous residues) :: 0 of 62\nPseudo Genes (frameshifted) :: 21 of 62\nPseudo Genes (incomplete) :: 41 of 62\nPseudo Genes (internal stop) :: 16 of 62\nPseudo Genes (multiple problems) :: 13 of 62\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
soil sample, near Greifswald, East Germany
type strain of Chroococcidiopsis thermalis
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_009782231.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
HhoA/HhoB/HtrA family serine endopeptidase
COORDINATES: similar to AA sequence:RefSeq:WP_017715791.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013578541.1
COORDINATES: similar to AA sequence:RefSeq:WP_009785981.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810001.1
COORDINATES: similar to AA sequence:RefSeq:WP_017323657.1
COORDINATES: similar to AA sequence:RefSeq:WP_015145538.1
GO:1903425 - fluoride transmembrane transporter activity [Evidence IEA]
GO:1903424 - fluoride transmembrane transport [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF01734
Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride; They are found in a wide variety of bacteria and archaea; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_017307576.1
COORDINATES: similar to AA sequence:RefSeq:WP_017321782.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007353647.1
COORDINATES: similar to AA sequence:RefSeq:WP_017656170.1
COORDINATES: similar to AA sequence:RefSeq:WP_017656165.1
COORDINATES: similar to AA sequence:RefSeq:WP_017714931.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0005525 - GTP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015163012.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364270.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO:0007165 - signal transduction [Evidence IEA]
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_016871571.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013859736.1
COORDINATES: similar to AA sequence:RefSeq:WP_010997241.1
COORDINATES: similar to AA sequence:RefSeq:WP_006099572.1
GO:0015267 - channel activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017316951.1
COORDINATES: similar to AA sequence:RefSeq:WP_017316950.1
COORDINATES: similar to AA sequence:RefSeq:WP_015957319.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013324598.1
COORDINATES: similar to AA sequence:RefSeq:WP_017656159.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014624.2
metal-sensitive transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_015364242.1
two-component system sensor histidine kinase RppB
COORDINATES: similar to AA sequence:RefSeq:WP_016878017.1
two-component system response regulator RppA
COORDINATES: similar to AA sequence:RefSeq:WP_016877572.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307554.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015162932.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0009036 - type II site-specific deoxyribonuclease activity [Evidence IEA]
GO:0009307 - DNA restriction-modification system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015145512.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006304 - DNA modification [Evidence IEA]
Eco57I restriction-modification methylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015164981.1
COORDINATES: similar to AA sequence:RefSeq:WP_017741012.1
COORDINATES: similar to AA sequence:RefSeq:WP_015155050.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015155051.1
COORDINATES: similar to AA sequence:RefSeq:WP_015328545.1
COORDINATES: similar to AA sequence:RefSeq:WP_016879202.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017292229.1
GO:0003796 - lysozyme activity [Evidence IEA]
GO:0016998 - cell wall macromolecule catabolic process [Evidence IEA]; GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010873930.1
GO:0016993 - precorrin-8X methylmutase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015158422.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0019829 - ATPase-coupled monoatomic cation transmembrane transporter activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0015662 - P-type ion transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017292182.1
COORDINATES: similar to AA sequence:RefSeq:WP_017292181.1
COORDINATES: similar to AA sequence:RefSeq:WP_016877609.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0004362 - glutathione-disulfide reductase (NADPH) activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0006749 - glutathione metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012409481.1
COORDINATES: similar to AA sequence:RefSeq:WP_006530532.1
COORDINATES: protein motif:HMM:NF033545.0
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015328542.1
four-helix bundle copper-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016877612.1
COORDINATES: similar to AA sequence:RefSeq:WP_016877613.1
GO:0046872 - metal ion binding [Evidence IEA]
heavy-metal-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016879199.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019829 - ATPase-coupled monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016876665.1
COORDINATES: similar to AA sequence:RefSeq:WP_016874670.1
heavy metal-responsive transcriptional regulator
COORDINATES: protein motif:HMM:NF013382.2
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011565306.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015159235.1
COORDINATES: similar to AA sequence:RefSeq:WP_016865553.1
GO:0008168 - methyltransferase activity [Evidence IEA]
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017307611.1
COORDINATES: similar to AA sequence:RefSeq:WP_015328540.1
COORDINATES: similar to AA sequence:RefSeq:WP_017302284.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
LuxR C-terminal-related transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012630222.1
COORDINATES: similar to AA sequence:RefSeq:WP_015187092.1
cytochrome b/b6 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019503257.1
COORDINATES: similar to AA sequence:RefSeq:WP_012594855.1
RNA-guided endonuclease TnpB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010902166.1
COORDINATES: protein motif:HMM:NF023903.2
COORDINATES: similar to AA sequence:RefSeq:WP_015118940.1
COORDINATES: similar to AA sequence:RefSeq:WP_016878147.1
COORDINATES: similar to AA sequence:RefSeq:WP_015154687.1
COORDINATES: similar to AA sequence:RefSeq:WP_015190711.1
GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010993956.1
GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
mechanosensitive ion channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015115809.1
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015328593.1
ubiquinol-cytochrome c reductase iron-sulfur subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015195739.1
COORDINATES: similar to AA sequence:RefSeq:WP_017292269.1
GO:0005507 - copper ion binding [Evidence IEA]
multicopper oxidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007061696.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_015129263.1
COORDINATES: similar to AA sequence:RefSeq:WP_016873433.1
COORDINATES: protein motif:HMM:NF013695.2
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006509958.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_015186429.1
COORDINATES: similar to AA sequence:RefSeq:WP_019497130.1
vitamin K epoxide reductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015143673.1
COORDINATES: similar to AA sequence:RefSeq:WP_019489139.1
GO:0004124 - cysteine synthase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012412639.1
COORDINATES: similar to AA sequence:RefSeq:WP_012599036.1
COORDINATES: similar to AA sequence:RefSeq:WP_016877571.1
COORDINATES: similar to AA sequence:RefSeq:WP_009633076.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364253.1
COORDINATES: similar to AA sequence:RefSeq:WP_017741017.1
COORDINATES: similar to AA sequence:RefSeq:WP_017292274.1
COORDINATES: similar to AA sequence:RefSeq:WP_007355644.1
GO:0016020 - membrane [Evidence IEA]; GO:0046930 - pore complex [Evidence IEA]
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0033212 - iron import into cell [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009631850.1
COORDINATES: similar to AA sequence:RefSeq:WP_015162999.1
COORDINATES: protein motif:HMM:NF038192.1
COORDINATES: similar to AA sequence:RefSeq:WP_015162997.1
COORDINATES: similar to AA sequence:RefSeq:WP_015211608.1
COORDINATES: similar to AA sequence:RefSeq:WP_017286527.1
COORDINATES: similar to AA sequence:RefSeq:WP_015168246.1
COORDINATES: protein motif:HMM:NF014385.2
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016877475.1
COORDINATES: similar to AA sequence:RefSeq:WP_015204266.1
COORDINATES: protein motif:HMM:NF015029.2
COORDINATES: similar to AA sequence:RefSeq:WP_017307563.1
cation diffusion facilitator family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_016879209.1
COORDINATES: similar to AA sequence:RefSeq:WP_017652068.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
RNA polymerase sigma factor, RpoD/SigA family
COORDINATES: similar to AA sequence:RefSeq:WP_015162918.1
COORDINATES: similar to AA sequence:RefSeq:WP_017292272.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0071586 - CAAX-box protein processing [Evidence IEA]
CPBP family intramembrane metalloprotease
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: similar to AA sequence:RefSeq:WP_015175880.1
COORDINATES: similar to AA sequence:RefSeq:WP_012409402.1
GO:0016301 - kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019497117.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]; GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015191579.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015158979.1
protein tyrosine phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015114276.1
COORDINATES: protein motif:HMM:NF025642.2
COORDINATES: similar to AA sequence:RefSeq:WP_017740753.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012166907.1
COORDINATES: protein motif:HMM:TIGR00180.1
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_015190004.1
COORDINATES: protein motif:HMM:NF024755.2
COORDINATES: protein motif:HMM:NF020387.2
COORDINATES: similar to AA sequence:RefSeq:WP_015130222.1
COORDINATES: similar to AA sequence:RefSeq:WP_015247122.1
COORDINATES: similar to AA sequence:RefSeq:WP_017308707.1
COORDINATES: similar to AA sequence:RefSeq:WP_004081114.1
COORDINATES: similar to AA sequence:RefSeq:WP_017292138.1
COORDINATES: similar to AA sequence:RefSeq:WP_009630180.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_015179709.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316793.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009786864.1
zinc-dependent alcohol dehydrogenase family protein
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017741429.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
nuclear transport factor 2 family protein
COORDINATES: protein motif:HMM:NF014380.2
COORDINATES: protein motif:HMM:NF012870.2
Mu transposase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015158960.1
COORDINATES: protein motif:HMM:NF021255.2
COORDINATES: similar to AA sequence:RefSeq:WP_015146426.1
COORDINATES: similar to AA sequence:RefSeq:WP_019496307.1
COORDINATES: similar to AA sequence:RefSeq:WP_016872918.1
COORDINATES: similar to AA sequence:RefSeq:WP_015158967.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017748486.1
COORDINATES: similar to AA sequence:RefSeq:WP_017748487.1
COORDINATES: similar to AA sequence:RefSeq:WP_017748488.1
COORDINATES: similar to AA sequence:RefSeq:WP_006918410.1
COORDINATES: similar to AA sequence:RefSeq:WP_009546344.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307723.1
COORDINATES: similar to AA sequence:RefSeq:WP_017741552.1
DUF3268 family zinc-finger domain-containing protein
COORDINATES: protein motif:HMM:NF019997.2
ArdC-like ssDNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010999645.1
COORDINATES: similar to AA sequence:RefSeq:WP_015111353.1
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016951561.1
type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein
GO:0000166 - nucleotide binding [Evidence IEA]
GO:0030541 - plasmid partitioning [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009547869.1
type II toxin-antitoxin system HicB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_017742770.1
type II toxin-antitoxin system HicA family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_012413339.1
COORDINATES: similar to AA sequence:RefSeq:WP_016864610.1
COORDINATES: protein motif:HMM:NF018154.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015078942.1
COORDINATES: similar to AA sequence:RefSeq:WP_017740778.1
COORDINATES: protein motif:HMM:NF015397.2
relaxase/mobilization nuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017741090.1
COORDINATES: similar to AA sequence:RefSeq:WP_017741089.1
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: similar to AA sequence:RefSeq:WP_015152944.1
COORDINATES: similar to AA sequence:RefSeq:WP_015152945.1
COORDINATES: similar to AA sequence:RefSeq:WP_017741084.1
COORDINATES: similar to AA sequence:RefSeq:WP_016953841.1
COORDINATES: similar to AA sequence:RefSeq:WP_010474779.1
COORDINATES: similar to AA sequence:RefSeq:WP_015328670.1
COORDINATES: similar to AA sequence:RefSeq:WP_018434124.1
isoprenylcysteine carboxylmethyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006104582.1
COORDINATES: similar to AA sequence:RefSeq:WP_006622497.1
COORDINATES: similar to AA sequence:RefSeq:WP_017314075.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307485.1
COORDINATES: similar to AA sequence:RefSeq:WP_017313914.1
COORDINATES: similar to AA sequence:RefSeq:WP_017291815.1
COORDINATES: similar to AA sequence:RefSeq:WP_020465186.1
COORDINATES: similar to AA sequence:RefSeq:WP_012408736.1
COORDINATES: similar to AA sequence:RefSeq:WP_017291488.1
COORDINATES: similar to AA sequence:RefSeq:WP_015171871.1
COORDINATES: similar to AA sequence:RefSeq:WP_017291818.1
COORDINATES: similar to AA sequence:RefSeq:WP_019491868.1
GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: similar to AA sequence:RefSeq:WP_015212327.1
COORDINATES: similar to AA sequence:RefSeq:WP_019498050.1
COORDINATES: protein motif:HMM:NF021634.2
COORDINATES: similar to AA sequence:RefSeq:WP_009632994.1
COORDINATES: similar to AA sequence:RefSeq:WP_015186253.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406712.1
COORDINATES: similar to AA sequence:RefSeq:WP_016864074.1
COORDINATES: similar to AA sequence:RefSeq:WP_019494677.1
GO:0004521 - endoribonuclease activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
putative toxin-antitoxin system toxin component, PIN family
COORDINATES: similar to AA sequence:RefSeq:WP_017298407.1
COORDINATES: similar to AA sequence:RefSeq:WP_015124402.1
translesion error-prone DNA polymerase V autoproteolytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_020250768.1
COORDINATES: similar to AA sequence:RefSeq:WP_015154489.1
COORDINATES: similar to AA sequence:RefSeq:WP_009555044.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017314066.1
COORDINATES: similar to AA sequence:RefSeq:WP_017741175.1
COORDINATES: similar to AA sequence:RefSeq:WP_017740897.1
COORDINATES: similar to AA sequence:RefSeq:WP_016877653.1
COORDINATES: similar to AA sequence:RefSeq:WP_017740899.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364347.1
COORDINATES: protein motif:HMM:NF015688.2
COORDINATES: similar to AA sequence:RefSeq:WP_016869137.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316857.1
type IV secretion system DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017740907.1
COORDINATES: similar to AA sequence:RefSeq:WP_016877671.1
COORDINATES: protein motif:HMM:NF025815.2
COORDINATES: similar to AA sequence:RefSeq:WP_009630270.1
COORDINATES: similar to AA sequence:RefSeq:WP_011056255.1
COORDINATES: similar to AA sequence:RefSeq:WP_015192683.1
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: similar to AA sequence:RefSeq:WP_019583318.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_016868379.1
COORDINATES: protein motif:HMM:NF040105.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015179516.1
COORDINATES: similar to AA sequence:RefSeq:WP_015155773.1
COORDINATES: similar to AA sequence:RefSeq:WP_011666305.1
COORDINATES: similar to AA sequence:RefSeq:WP_015153573.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011130985.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
replication-associated recombination protein A
COORDINATES: similar to AA sequence:RefSeq:WP_015196488.1
COORDINATES: similar to AA sequence:RefSeq:WP_005779329.1
heavy metal-binding domain-containing protein
COORDINATES: protein motif:HMM:NF017256.2
COORDINATES: similar to AA sequence:RefSeq:WP_015081680.1
COORDINATES: similar to AA sequence:RefSeq:WP_016948780.1
COORDINATES: similar to AA sequence:RefSeq:WP_012413239.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF022172.2
COORDINATES: similar to AA sequence:RefSeq:WP_006195614.1
Rpn family recombination-promoting nuclease/putative transposase
COORDINATES: similar to AA sequence:RefSeq:WP_017285767.1
COORDINATES: similar to AA sequence:RefSeq:WP_006511655.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012413241.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016877676.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364330.1
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024117.2
COORDINATES: similar to AA sequence:RefSeq:WP_017307520.1
COORDINATES: protein motif:HMM:NF039575.1
COORDINATES: protein motif:HMM:TIGR00663.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016877684.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016877439.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
DNA polymerase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015120889.1
COORDINATES: similar to AA sequence:RefSeq:WP_017654912.1
COORDINATES: similar to AA sequence:RefSeq:WP_016953800.1
COORDINATES: similar to AA sequence:RefSeq:WP_015328570.1
CusA/CzcA family heavy metal efflux RND transporter
COORDINATES: similar to AA sequence:RefSeq:WP_015195759.1
COORDINATES: similar to AA sequence:RefSeq:WP_006620883.1
COORDINATES: similar to AA sequence:RefSeq:WP_006198665.1
COORDINATES: similar to AA sequence:RefSeq:WP_009785764.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015127362.1
COORDINATES: similar to AA sequence:RefSeq:WP_015114363.1
COORDINATES: similar to AA sequence:RefSeq:WP_015162934.1
COORDINATES: similar to AA sequence:RefSeq:WP_015202223.1
COORDINATES: similar to AA sequence:RefSeq:WP_015161952.1
COORDINATES: similar to AA sequence:RefSeq:WP_017656182.1
lysylphosphatidylglycerol synthase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017656183.1
phosphatidylglycerol lysyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015178371.1
COORDINATES: similar to AA sequence:RefSeq:WP_015156936.1
COORDINATES: similar to AA sequence:RefSeq:WP_016871574.1
COORDINATES: similar to AA sequence:RefSeq:WP_017656172.1
COORDINATES: similar to AA sequence:RefSeq:WP_017318482.1
COORDINATES: similar to AA sequence:RefSeq:WP_013322327.1
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
DHA2 family efflux MFS transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_016952950.1
COORDINATES: similar to AA sequence:RefSeq:WP_017323035.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_015177691.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307580.1
COORDINATES: similar to AA sequence:RefSeq:WP_016870601.1
COORDINATES: similar to AA sequence:RefSeq:WP_016870602.1
COORDINATES: protein motif:HMM:NF022072.2
COORDINATES: protein motif:HMM:NF012371.2
GO:0016787 - hydrolase activity [Evidence IEA]
serine hydrolase domain-containing protein
COORDINATES: protein motif:HMM:TIGR04012.1
GO:0016881 - acid-amino acid ligase activity [Evidence IEA]
GO:0070501 - poly-gamma-glutamate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025467.2
poly-gamma-glutamate biosynthesis protein PgsC/CapC
COORDINATES: protein motif:HMM:NF024829.2
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF013625.2
GO:0042834 - peptidoglycan binding [Evidence IEA]
peptidoglycan-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013325340.1
COORDINATES: similar to AA sequence:RefSeq:WP_015144396.1
COORDINATES: protein motif:HMM:NF015921.2
COORDINATES: similar to AA sequence:RefSeq:WP_010993954.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307589.1
GO:0019867 - outer membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014829042.1
COORDINATES: similar to AA sequence:RefSeq:WP_007916177.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020645880.1
COORDINATES: similar to AA sequence:RefSeq:WP_007916179.1
COORDINATES: protein motif:HMM:TIGR00027.1
COORDINATES: protein motif:HMM:NF024736.2
COORDINATES: similar to AA sequence:RefSeq:WP_006633103.1
COORDINATES: similar to AA sequence:RefSeq:WP_016871576.1
COORDINATES: similar to AA sequence:RefSeq:WP_010996256.1
COORDINATES: protein motif:HMM:TIGR00229.1
PAS domain-containing sensor histidine kinase
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: protein motif:HMM:NF013715.2
COORDINATES: similar to AA sequence:RefSeq:WP_012413077.1
COORDINATES: similar to AA sequence:RefSeq:WP_013320690.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406963.1
COORDINATES: similar to AA sequence:RefSeq:WP_015216525.1
COORDINATES: similar to AA sequence:RefSeq:WP_006194789.1