Pseudolysobacter antarcticus strain AQ6-296 plasmid unnamed1.
Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudolysobacter.
Pseudolysobacter antarctica gen. nov., sp. nov., isolated from Fildes Peninsula, Antarctica
Submitted (04-JAN-2019) College of Life Sciences, Wuhan University, luojiashan, Wuhan 430000, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP035703.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SOAPdenovo v. v2.04\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 197.0x\nSequencing Technology :: Illumina+PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/09/2023 02:15:08\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,071\nCDSs (total) :: 4,011\nGenes (coding) :: 3,963\nCDSs (with protein) :: 3,963\nGenes (RNA) :: 60\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 48\nncRNAs :: 6\nPseudo Genes (total) :: 48\nCDSs (without protein) :: 48\nPseudo Genes (ambiguous residues) :: 0 of 48\nPseudo Genes (frameshifted) :: 12 of 48\nPseudo Genes (incomplete) :: 39 of 48\nPseudo Genes (internal stop) :: 3 of 48\nPseudo Genes (multiple problems) :: 6 of 48\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##
type strain of Pseudolysobacter antarcticus
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_009031634.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007508565.1
GO:0030261 - chromosome condensation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011330409.1
COORDINATES: protein motif:HMM:NF021637.2
COORDINATES: similar to AA sequence:RefSeq:WP_012806092.1
COORDINATES: similar to AA sequence:RefSeq:WP_012806091.1
COORDINATES: similar to AA sequence:RefSeq:WP_012824488.1
COORDINATES: similar to AA sequence:RefSeq:WP_008495920.1
GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_007682488.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]