Pseudomonas hydrolytica strain KHPS2 plasmid unnamed, complete sequence.
type: Entry
definition: Pseudomonas hydrolytica strain KHPS2 plasmid unnamed, complete sequence.
sequence version: NZ_CP100554.1
sequence date: 2023-07-21
sequence: sequence
division: CON
label: NZ_CP100554.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN29209891
keyword: RefSeq
source: Pseudomonas hydrolytica
organism: Pseudomonas hydrolytica
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP100554.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: unicycler v. 0.4.8\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 99x\nSequencing Technology :: Illumina NextSeq; Oxford Nanopore\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 07/21/2023 04:21:08\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,192\nCDSs (total) :: 5,110\nGenes (coding) :: 5,062\nCDSs (with protein) :: 5,062\nGenes (RNA) :: 82\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 66\nncRNAs :: 4\nPseudo Genes (total) :: 48\nCDSs (without protein) :: 48\nPseudo Genes (ambiguous residues) :: 0 of 48\nPseudo Genes (frameshifted) :: 13 of 48\nPseudo Genes (incomplete) :: 36 of 48\nPseudo Genes (internal stop) :: 5 of 48\nPseudo Genes (multiple problems) :: 6 of 48\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 83915
topology: circular
so has quality: SO_0000988
location: 1..83915
location: region:1-83915:1
RO_0002162: 2493633

NZ_CP100554
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN29209891
type: BioSample
SIO_000068: biosample

1
title: Genome sequences of two Pseudomonas isolates that can use metformin as a sole nitrogen source
author: Hillmann, K.B.
author: Niehaus, T.D.
journal: Unpublished

2
title: Direct Submission
author: Hillmann, K.B.
author: Niehaus, T.D.
journal: Submitted (01-JUL-2022) Plant and Microbial Biology, University of Minnesota, 1445 Gortner Avenue, St. Paul, MN 55108, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83915:1
position: 83915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-83915:1:source
so part of: sequence
organism: Pseudomonas hydrolytica
mol type: genomic DNA
strain: KHPS2
isolation source: wastewater treatment plant
plasmid: unnamed
country: USA
collection date: 2021-10

2493633
type: Taxonomy
SIO_000068: taxonomy

NLY38_RS25440
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25440
old locus tag: NLY38_25440
so part of: sequence
location: join(83330..83915,1..221)
location: region:1-83915:1
so has part: feature:83330-83915:1:exon
so has part: feature:1-221:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:83330-83915:1:exon

position:83330:1
position: 83330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-221:1:exon

position:221:1
position: 221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NLY38_RS25440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25440
old locus tag: NLY38_25440
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: TrbG/VirB9 family P-type conjugative transfer protein
translation: MNLRLLFKASGLAIALLFSATSYGAAVPKGTEFDNRIKYIMYNPDDVVVIHTRAGNSTLIQLEADEYVTNLPSGGLSIGDKGAWTIGVRGNNIFLKPAGEFPQTNINLVTNKRTYAFSLVETEHITQTAWQVRFKYPAEPVPLEDVKRAHVDKGPCSDGPRNLNWFKYGDQSLAPTEVWDDGRFTCFRFPTSKALPAIYRYAPDTELKEALVNFNMKDDVVVVHEVSQEFRLRIGNKVLGIKTDSLRDAPYNANKTSTGETRVNVNVQ
SIO_010081: NLY38_RS25440
subclass of: SO_0000673
so part of: NLY38_RS25440
location: join(83330..83915,1..221)
location: region:1-83915:1
so has part: feature:83330-83915:1:exon
so has part: feature:1-221:1:exon

WP_254348607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83330-83915:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-221:1:exon

NLY38_RS25445
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
gene: virB10
locus tag: NLY38_RS25445
old locus tag: NLY38_25445
so part of: sequence
location: 211..1608
location: region:211-1608:1
so has part: feature:211-1608:1:exon
subclass of: SO_0000010

position:211:1
position: 211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1608:1
position: 1608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211-1608:1:exon

NLY38_RS25445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
gene: virB10
locus tag: NLY38_RS25445
old locus tag: NLY38_25445
inference: COORDINATES: protein motif:HMM:NF038091.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein VirB10
translation: MSSNPYDNFKEDDDSGQPLRAEPPAPIEGDRGEPTTKAPKRKKKGVIVAVVLLIVFAVLVVGFMGLTFYRVMSKNKTDAAEQIRADQALEMKASTGPDLGAYQDRVAKQLEEDRKRREAALAAAKAAEAKGQGTAAPAAAPGAPAAAPAGQPGLGQYGQGGQQREMRNGKPVPTPAELAAQRRLENDVLWTGEEKVRGSGNGSSGGSSSSSAGGGQRGGSNQMTFEERMAQNPYVSGAAPGGSSGGSLMGGGSSRGGESISGMLATESYPDGIAQQRQDLKFLLIHGTTIPCTLIPRIVTNYPGQTSCLINRDVYSADGSVVLISRGSKVDGERKVSMKNGIAKVFVAWGSIETPDGVRVRIDSMAADQLGAAGLDAWIDNHYAERFGGAILLSFLDDVFQAIADNASSSDGPTFDSSTDNAQDMASIALENSINIPPTGYVNHASETNIIVARDVDFRHIYGVK
SIO_010081: NLY38_RS25445
subclass of: SO_0000673
so part of: NLY38_RS25445
location: 211..1608
location: region:211-1608:1
so has part: feature:211-1608:1:exon

WP_254348608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211-1608:1:exon

NLY38_RS25450
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
gene: virB11
locus tag: NLY38_RS25450
old locus tag: NLY38_25450
so part of: sequence
location: 1608..2654
location: region:1608-2654:1
so has part: feature:1608-2654:1:exon
subclass of: SO_0000010

position:2654:1
position: 2654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1608-2654:1:exon

NLY38_RS25450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
gene: virB11
locus tag: NLY38_RS25450
old locus tag: NLY38_25450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020852263.1
GO component: GO:0043684 - type IV secretion system complex [Evidence IEA]
GO process: GO:0044097 - secretion by the type IV secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type DNA transfer ATPase VirB11
translation: MNAVTQPLQKPAVPEFDSSKPIRSLLQRTGVQDLLNIEGVTEVAINRPGELWYEKQGIWNMVEAKHLDLMLCQQLANSLAVQVASDSAQLQKSPICPVLLPDGERGQVVVPPATERGCISFTIRKPSTSRYSMDDYHESGRLTGYKVVEKQTDLADFQKEMLMCVKNGDMRRFFRLAVDNKLNLLFGGATGSGKTTFSKAVVDLYPANRRYITIEDIHELQMPNHPNRVHLFFGPHITAKKLVESCMRMKGDHIFMSELKGDETWSYLSLLNTGHNGSLTTAHFNDCASAASRLSQMVKQSDVGLTLDYDFIYRTVQTSIDVVCFWQGSYLKEVLFDPEQKLRLLNGE
SIO_010081: NLY38_RS25450
subclass of: SO_0000673
so part of: NLY38_RS25450
location: 1608..2654
location: region:1608-2654:1
so has part: feature:1608-2654:1:exon

WP_254348609.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1608-2654:1:exon

NLY38_RS25455
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25455
old locus tag: NLY38_25455
so part of: sequence
location: 2655..4418
location: region:2655-4418:1
so has part: feature:2655-4418:1:exon
subclass of: SO_0000010

position:2655:1
position: 2655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4418:1
position: 4418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2655-4418:1:exon

NLY38_RS25455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25455
old locus tag: NLY38_25455
inference: COORDINATES: protein motif:HMM:NF014581.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MKPGKIIALVIVLLITLAVLAVAGQFAGGVFLLKRLGLDPHSVQLLTLYEYRAAYGQMAGPVGKFIKMATAISVAPVGMVLVFCVVLLATRKGLIDKLYGEARFAKDFEIQKANMFLDEKQEHKWPPVLLGKKGKRYIADYSQEYTTLAAPPGSGKGVGFVVPNLLYYPHSVLNFDPKLENFNLTSGYRSKVLGQDVYLFSPDNDKYMSHCWNPLDYISADPRKTLADIKNISAILIPAEPGPNQSFFIGARKALDGLLLYLIESPDEPRNMYRVLEINDSPIGIDKWIITTIAKRAKSGKPLSDECVRMLMSYANETEKKRDTTKGIIGTYLDPFSDALCRAATQKSDFDFRDLRKKPMTIYVGIAPGNIPKFQRLLNLFFSQAITLNTDMLPEDGPKDANGQPVLKYQCLALLDEFVALGPIEIIRASSGYTRAYNMRYAIVFQNKAQVFADQCYGRAGGESLLDTFHNEIVYATESVQDAEEYSKRLGNTTLKDRARSRTRAKGGPSSTDSIQRHSRALMLPQEIQRLPYDKEIIFKKGGKLMPINADKIFWYKDEMFVSRANMPLPEIPPMRFADTPAETATV
SIO_010081: NLY38_RS25455
subclass of: SO_0000673
so part of: NLY38_RS25455
location: 2655..4418
location: region:2655-4418:1
so has part: feature:2655-4418:1:exon

WP_254348611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2655-4418:1:exon

NLY38_RS25460
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25460
old locus tag: NLY38_25460
so part of: sequence
location: 4642..4974
location: region:4642-4974:1
so has part: feature:4642-4974:1:exon
subclass of: SO_0000010

position:4642:1
position: 4642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4974:1
position: 4974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4642-4974:1:exon

NLY38_RS25460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25460
old locus tag: NLY38_25460
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKVKAILAAISVATLAGCASNGDLEKTNIQIKTLEERITAFENRASQLEQRQVDQTRHDFSRFCFSNNMAFSEGSIYAGKICERQNGTTVFEAGRVVPQPLVWRPWKYQ
SIO_010081: NLY38_RS25460
subclass of: SO_0000673
so part of: NLY38_RS25460
location: 4642..4974
location: region:4642-4974:1
so has part: feature:4642-4974:1:exon

WP_254348614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4642-4974:1:exon

NLY38_RS25465
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25465
old locus tag: NLY38_25465
so part of: sequence
location: 4998..5435
location: region:4998-5435:1
so has part: feature:4998-5435:1:exon
subclass of: SO_0000010

position:4998:1
position: 4998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5435:1
position: 5435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4998-5435:1:exon

NLY38_RS25465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25465
old locus tag: NLY38_25465
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVTCDLPPSGFTRTITEVHEWASAVAIAARQHLSEAISVHLWAYRHGQHQTLSCDLFDSSGGVYCVGLHAVGQYDLTAAHPQDAEALVPDLVDAMHIAGIIIRALDAEVTVGRYINEVNEEVLAQPLGPGHTNGPMAIAGKPAC
SIO_010081: NLY38_RS25465
subclass of: SO_0000673
so part of: NLY38_RS25465
location: 4998..5435
location: region:4998-5435:1
so has part: feature:4998-5435:1:exon

WP_254348616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4998-5435:1:exon

NLY38_RS25470
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25470
old locus tag: NLY38_25470
so part of: sequence
location: 5642..5824
location: region:5642-5824:1
so has part: feature:5642-5824:1:exon
subclass of: SO_0000010

position:5642:1
position: 5642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5824:1
position: 5824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5642-5824:1:exon

NLY38_RS25470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25470
old locus tag: NLY38_25470
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRSNLCFIAAGLAGLPAWAGWISDLPDFLKWLMIVSVFGVGLLGGIFWSMEAASDSGDS
SIO_010081: NLY38_RS25470
subclass of: SO_0000673
so part of: NLY38_RS25470
location: 5642..5824
location: region:5642-5824:1
so has part: feature:5642-5824:1:exon

WP_254348618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5642-5824:1:exon

NLY38_RS25475
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25475
old locus tag: NLY38_25475
so part of: sequence
location: 5824..6471
location: region:5824-6471:1
so has part: feature:5824-6471:1:exon
subclass of: SO_0000010

position:6471:1
position: 6471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5824-6471:1:exon

NLY38_RS25475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25475
old locus tag: NLY38_25475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007160867.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MIIRAYLRASTADQDANRAREQLKAFVAERQTRITTFYVENASGATVDRPELQRLLSEAGEGDILLVESVDRLSRLPQAAWEALARQISAAGLQVVAVDLPVTHMAMRPASGEGIEAWLHQALAKMFLEFMAAFARKDYELRRQRQAQGIAAAKEAGRFVPRKRNLKLYSAAIKLRETHSIRATAAILKCSKGLVERADAWAKTNAAAEVATDGE
SIO_010081: NLY38_RS25475
subclass of: SO_0000673
so part of: NLY38_RS25475
location: 5824..6471
location: region:5824-6471:1
so has part: feature:5824-6471:1:exon

WP_254348620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5824-6471:1:exon

NLY38_RS25480
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25480
old locus tag: NLY38_25480
so part of: sequence
location: complement(6514..7014)
location: region:6514-7014:-1
so has part: feature:6514-7014:-1:exon
subclass of: SO_0000010

position:6514:-1
position: 6514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7014:-1
position: 7014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6514-7014:-1:exon

NLY38_RS25480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25480
old locus tag: NLY38_25480
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKLLFITLLIGLSGCAAQRPSDAQLMRQALQQYTQIADIAPDQKGIDMLAFKIRSHGALGDALATAAGGGATALQLRNALRDTYAAGERGFLIIGAGGALDRAMLGTAFDGQALSGMQIFYAGDGDAVDRIRLTSALPSATSAAERPSAARYSARPSSSFSRSKT
SIO_010081: NLY38_RS25480
subclass of: SO_0000673
so part of: NLY38_RS25480
location: complement(6514..7014)
location: region:6514-7014:-1
so has part: feature:6514-7014:-1:exon

WP_254348622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6514-7014:-1:exon

NLY38_RS25485
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25485
old locus tag: NLY38_25485
so part of: sequence
location: complement(7075..7740)
location: region:7075-7740:-1
so has part: feature:7075-7740:-1:exon
subclass of: SO_0000010

position:7075:-1
position: 7075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7740:-1
position: 7740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7075-7740:-1:exon

NLY38_RS25485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25485
old locus tag: NLY38_25485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012216568.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGFFSKLFGRRKVEQPAPEGPDIAPELAPALEAYQAGRPDEAVTLAEPYLDRDVDAQRLCALAHSEAGRFEQAFPHWLALFEREPSAHNACQLASSSVMCGEVARGEAWLQKAHEINQQTEETSSARFLVSFIAALQQSGHLAEALPHLAVLRDLYGQLSITDSTFLYLRGLPFFSTFLQNSLPTLQALQPRETVLAWYGELRGRLDEDGEAQLAAWMERL
SIO_010081: NLY38_RS25485
subclass of: SO_0000673
so part of: NLY38_RS25485
location: complement(7075..7740)
location: region:7075-7740:-1
so has part: feature:7075-7740:-1:exon

WP_254300366.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7075-7740:-1:exon

NLY38_RS25490
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25490
old locus tag: NLY38_25490
so part of: sequence
location: complement(7838..8776)
location: region:7838-8776:-1
so has part: feature:7838-8776:-1:exon
subclass of: SO_0000010

position:7838:-1
position: 7838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8776:-1
position: 8776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7838-8776:-1:exon

NLY38_RS25490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25490
old locus tag: NLY38_25490
inference: COORDINATES: protein motif:HMM:NF015431.2
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MVVSDIDLRLLKVFRAVVEAGGFSNAQAVLNVSQSTISTQMSQLETRVGFVLCQRGRSGFRLTCEGEAFYRRVVELFRSLQSFESQTAEIRGGLSGVLRIGFLDNIITDASCPLREAMTRFIRQPDNQVRIALDVLSPAALEQGVLDLSLDAAIGIFPHRLAGLKYEPLYQERDVLVCHCSHALARVADPHLLARALPATPRVVRSFLGTAEFPFEDDGREARVTSLEASAMLILSGTYVGFLPRHYVQSWLDSGELVELLPDKFVRHSQFHLVTRDTQNALPTALEVFLRCIHAVQQGDTVTPLRVAQPGL
SIO_010081: NLY38_RS25490
subclass of: SO_0000673
so part of: NLY38_RS25490
location: complement(7838..8776)
location: region:7838-8776:-1
so has part: feature:7838-8776:-1:exon

WP_254348624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7838-8776:-1:exon

NLY38_RS25495
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25495
old locus tag: NLY38_25495
so part of: sequence
location: 9017..9976
location: region:9017-9976:1
so has part: feature:9017-9976:1:exon
subclass of: SO_0000010

position:9017:1
position: 9017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9976:1
position: 9976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9017-9976:1:exon

NLY38_RS25495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25495
old locus tag: NLY38_25495
inference: COORDINATES: protein motif:HMM:TIGR01728.1
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0005488 - binding [Evidence IEA]
GO process: GO:0042918 - alkanesulfonate transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aliphatic sulfonate ABC transporter substrate-binding protein
translation: MLPRLFKRCSAAALLSLSVLSPAFAKDTLHVAHDQWIGYSGFFVANAKGFFDEADLEIKTTQFSGPGDTIPPLIAGHIDVGLTTLYNLALAAGKGESSLNAVYLLDTSNGADAVVAAPDVKSVADLKGKRVAVSTGEVNHLLLTAALQSANLTEADVKLVNMNADDAGAALLAGRVDAAVTWEPWVTRASAAGGHALYTSADAADLILDSIVVTDATLEKRRDAIVRFIQAVDRGVQYLREHPQEGQEIIAKALEISPEDAAEMLTGDKVYGIAENKVLLGANGKGYDSLAAVADFLTQLGLISQPVDGQALLTGDLLP
SIO_010081: NLY38_RS25495
subclass of: SO_0000673
so part of: NLY38_RS25495
location: 9017..9976
location: region:9017-9976:1
so has part: feature:9017-9976:1:exon

WP_254348625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9017-9976:1:exon

NLY38_RS25500
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25500
old locus tag: NLY38_25500
so part of: sequence
location: 9973..10458
location: region:9973-10458:1
so has part: feature:9973-10458:1:exon
subclass of: SO_0000010

position:9973:1
position: 9973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10458:1
position: 10458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9973-10458:1:exon

NLY38_RS25500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25500
old locus tag: NLY38_25500
EC number: 3.5.4.33
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015297829.1
GO function: GO:0052717 - tRNA-specific adenosine-34 deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoside deaminase
translation: MSERNHEKGMLLAIEQALKAVASGEPPFGVVILDAQGELVAATHDEVNTRGDMSAHAETLAVRAACQVRGPSLEGCFLYTTCEPCPMCFTTAWLARIGGVVYATTMDEVHKILGDAQRELRVPVTQMNDLSGEPVTLVKGVLRDRCLQLFREHAATLATTK
SIO_010081: NLY38_RS25500
subclass of: SO_0000673
so part of: NLY38_RS25500
location: 9973..10458
location: region:9973-10458:1
so has part: feature:9973-10458:1:exon

WP_254300361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9973-10458:1:exon

NLY38_RS25505
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25505
old locus tag: NLY38_25505
so part of: sequence
location: 10475..11110
location: region:10475-11110:1
so has part: feature:10475-11110:1:exon
subclass of: SO_0000010

position:10475:1
position: 10475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11110:1
position: 11110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10475-11110:1:exon

NLY38_RS25505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25505
old locus tag: NLY38_25505
EC number: 3.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012823731.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isochorismatase family cysteine hydrolase
translation: MPKQTALLVIDMQRDFCDPRGYAGQAGMDVNVLRRPIPAIQALLDAARAQSMMVIHTREGHRPEILDCHPSKRRRSLRAGAEIGSQGPLGRLLIRGEYGHDIIDELQPAPGEVVVDKPGYGAFYQTDLELLLRASGIENLVLTGVTTDVCVHSTLREAVDRGFNCITVSDGCAAGDPALHEAALQTILGEGHIFGEVATSAEVLAQWSARP
SIO_010081: NLY38_RS25505
subclass of: SO_0000673
so part of: NLY38_RS25505
location: 10475..11110
location: region:10475-11110:1
so has part: feature:10475-11110:1:exon

WP_254300359.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10475-11110:1:exon

NLY38_RS25510
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25510
old locus tag: NLY38_25510
so part of: sequence
location: 11107..11901
location: region:11107-11901:1
so has part: feature:11107-11901:1:exon
subclass of: SO_0000010

position:11107:1
position: 11107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11901:1
position: 11901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11107-11901:1:exon

NLY38_RS25510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25510
old locus tag: NLY38_25510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011811489.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MNGDVWKIRGRVSRRASLLIGLGTLLAVFGGWWLLAGSGWVNPLFLPTPERVVTRLASWWQAGLLQDIGISVYRVTAAFLLAALIAIPLGLLAGSYAPIQAALQPLMEFSRYLPAVAFVPLILLWVGIEEGSKITIIWIGTFFQMVLMVADDVRRVPQTQLDAGLTLGARNGELMPRVMLKSALPDIVTTLRVTMGWAWTYLVVAELVAANSGLGYSILKAQRFMQTETIFAGILLIGVLGLAMDQLFRMLHRMLFPWLYLRRA
SIO_010081: NLY38_RS25510
subclass of: SO_0000673
so part of: NLY38_RS25510
location: 11107..11901
location: region:11107-11901:1
so has part: feature:11107-11901:1:exon

WP_254348626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11107-11901:1:exon

NLY38_RS25515
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25515
old locus tag: NLY38_25515
so part of: sequence
location: 11898..12725
location: region:11898-12725:1
so has part: feature:11898-12725:1:exon
subclass of: SO_0000010

position:11898:1
position: 11898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12725:1
position: 12725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11898-12725:1:exon

NLY38_RS25515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25515
old locus tag: NLY38_25515
EC number: 7.6.2.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015277150.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MMPASIQVSNLIKSFAEKQGAKRVLDGINLSVAPGEFTALVGASGCGKSTLLRLIAGLDRFDSGSILVGDRQVTRPGADRTMVFQDYSLYPWLTVMENVRFCRELLSHRNDTESQSLSAIDRSYALLELMGLSHAANLYPTQLSGGMQQRVAIARALMAQPEVLLMDEPFGALDAQTREVMHDLILHLHARLKPTIIFVTHDVEEALYLAQRVVVLAPNPGRVDSVLESPLPPSAERDQEMKTSPEFVAAKREILARIRKTTGVSTRSDLLERIS
SIO_010081: NLY38_RS25515
subclass of: SO_0000673
so part of: NLY38_RS25515
location: 11898..12725
location: region:11898-12725:1
so has part: feature:11898-12725:1:exon

WP_254300349.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11898-12725:1:exon

NLY38_RS25520
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25520
old locus tag: NLY38_25520
so part of: sequence
location: complement(12813..13274)
location: region:12813-13274:-1
so has part: feature:12813-13274:-1:exon
subclass of: SO_0000010

position:12813:-1
position: 12813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13274:-1
position: 13274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12813-13274:-1:exon

NLY38_RS25520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25520
old locus tag: NLY38_25520
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTSAKPIQFAVTINAPVPTVWRLMLGPESYRRWAAVFAEGTYFEGSWEQGTKMKFFSPPSGDGMLSEIAENRPNAFLSIRHLGVIGHGVEDTTSESVRAWAPAYENYSFTPVPEGTKLVIDLDVPGEWVEYMNDAWPKALMALKQLSEAETAS
SIO_010081: NLY38_RS25520
subclass of: SO_0000673
so part of: NLY38_RS25520
location: complement(12813..13274)
location: region:12813-13274:-1
so has part: feature:12813-13274:-1:exon

WP_254300347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12813-13274:-1:exon

NLY38_RS25525
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25525
old locus tag: NLY38_25525
so part of: sequence
location: complement(13459..13827)
location: region:13459-13827:-1
so has part: feature:13459-13827:-1:exon
subclass of: SO_0000010

position:13459:-1
position: 13459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13827:-1
position: 13827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13459-13827:-1:exon

NLY38_RS25525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25525
old locus tag: NLY38_25525
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQESRGFELMDLHHFLQPILDWLSTDHGRGRYGWVLVLEVACGIGGTLVAREIITKRAALKKRVTDQLFDRPLVATIVRTDEGKSTKLQARLERTSAGYVVTVQDGLGDSRQETMGTIEEVA
SIO_010081: NLY38_RS25525
subclass of: SO_0000673
so part of: NLY38_RS25525
location: complement(13459..13827)
location: region:13459-13827:-1
so has part: feature:13459-13827:-1:exon

WP_254300345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13459-13827:-1:exon

NLY38_RS25530
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25530
old locus tag: NLY38_25530
so part of: sequence
location: complement(14073..15623)
location: region:14073-15623:-1
so has part: feature:14073-15623:-1:exon
subclass of: SO_0000010

position:14073:-1
position: 14073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15623:-1
position: 15623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14073-15623:-1:exon

NLY38_RS25530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25530
old locus tag: NLY38_25530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004424788.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family transposase
translation: MKFGADHLPDDPVLLKQMLLLAHGKVAQLQEQVALLRHKLFSPKSERSPEDTDSPQLAMFNEAEELIEALSAAPAEAEAEAEAEAEEIVAPVKRRGKRKPLPANLPRVEVIHDLPEHELTCACGACKQVIGEETSEQLEIIPMQVRVIRHIRKTYACKACDAAPITADKPAQLIEKSLASPSVLAMLLTTKYADGIPLYRFEKMLSRHGIDIPRQTLARWVIQCGEQLQPLLNLMRDKLLEYPVLYCDETRLQVLHEPGRDPTAQSWMWVQSGGPPDKPVILFDYTTSRAQEVPLRLLDGYRGYLMTDDYAGYNAVAAQEGIERLGCWAHARRKFVEAQKVQPKGKTGRADMALNLINRLYGIERDLKDACDTERLVARQQRSQPLLDQLKVWLDKTQPQVAGQTALGRAVNYLASNWRKLVRYVEGGHLPIDNNRAENAIRPFVIGRKNWLFSDTPKGATASAQIYSLIETAKANGQEPYAWLRHILDRLPTASSVEDYEALLPWNCSPASAFAS
SIO_010081: NLY38_RS25530
subclass of: SO_0000673
so part of: NLY38_RS25530
location: complement(14073..15623)
location: region:14073-15623:-1
so has part: feature:14073-15623:-1:exon

WP_254348627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14073-15623:-1:exon

NLY38_RS25535
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
gene: tnpB
locus tag: NLY38_RS25535
old locus tag: NLY38_25535
so part of: sequence
location: complement(15643..16002)
location: region:15643-16002:-1
so has part: feature:15643-16002:-1:exon
subclass of: SO_0000010

position:15643:-1
position: 15643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16002:-1
position: 16002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15643-16002:-1:exon

NLY38_RS25535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
gene: tnpB
locus tag: NLY38_RS25535
old locus tag: NLY38_25535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003449170.1
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MMRPDAKVQKVYLYPKPVDFRKSINGLAALVELDIKVEVFNPVLFVFLNRTRSQVKILYWERNGFCLWLKRLEAERFKTKPDAGDEAIELTVDELNWLLDGIDLWRNRPHQVLTPRFVA
SIO_010081: NLY38_RS25535
subclass of: SO_0000673
so part of: NLY38_RS25535
location: complement(15643..16002)
location: region:15643-16002:-1
so has part: feature:15643-16002:-1:exon

WP_058151328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15643-16002:-1:exon

NLY38_RS25540
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25540
old locus tag: NLY38_25540
so part of: sequence
location: complement(16478..16807)
location: region:16478-16807:-1
so has part: feature:16478-16807:-1:exon
subclass of: SO_0000010

position:16478:-1
position: 16478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16807:-1
position: 16807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16478-16807:-1:exon

NLY38_RS25540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25540
old locus tag: NLY38_25540
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: lipoprotein
translation: MKKLFIAALAVVALAGCKEEGGAFVGQWKNNAKMPETITVTEASGGYRAVAQIDEDKKGYMNVEVVLKAESDKLLVRDKDGKRALEIAADGKMTSYLRHGKDDTFTKVN
SIO_010081: NLY38_RS25540
subclass of: SO_0000673
so part of: NLY38_RS25540
location: complement(16478..16807)
location: region:16478-16807:-1
so has part: feature:16478-16807:-1:exon

WP_125836219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16478-16807:-1:exon

NLY38_RS25545
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25545
old locus tag: NLY38_25545
so part of: sequence
location: complement(16804..17184)
location: region:16804-17184:-1
so has part: feature:16804-17184:-1:exon
subclass of: SO_0000010

position:16804:-1
position: 16804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17184:-1
position: 17184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16804-17184:-1:exon

NLY38_RS25545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25545
old locus tag: NLY38_25545
inference: COORDINATES: protein motif:HMM:NF041859.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0071824 - protein-DNA complex organization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histone-like nucleoid-structuring protein, MvaT/MvaU family
translation: MTQLVIQHREIEAQIKSLENELRAIEANPRYAQERAFLDALEGLLGEYGKSLSDVVKILDPQAAEPQRARGARGPAPGTMRKKLRYKNPHTGEHIDTAGANNRILKAWKLQYPNDNIKDWIVGESK
SIO_010081: NLY38_RS25545
subclass of: SO_0000673
so part of: NLY38_RS25545
location: complement(16804..17184)
location: region:16804-17184:-1
so has part: feature:16804-17184:-1:exon

WP_254348628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16804-17184:-1:exon

NLY38_RS25550
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25550
old locus tag: NLY38_25550
so part of: sequence
location: complement(17185..18435)
location: region:17185-18435:-1
so has part: feature:17185-18435:-1:exon
subclass of: SO_0000010

position:17185:-1
position: 17185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18435:-1
position: 18435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17185-18435:-1:exon

NLY38_RS25550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25550
old locus tag: NLY38_25550
inference: COORDINATES: protein motif:HMM:NF018154.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zeta toxin family protein
translation: MANPFQLSQDEHEAIYREIEAHYLPKTQPQEQPRAIITGGQPGSGKSGITDLAKAELRNQGGYILIDADKLRRESPLYDAAMAYDDRTAANMTHPDAGAWAGRLTVAAAEGRRNLIIDQTSKDPDAVESLAMKLKDAGYTVELRVMAVHEKISELRIHSRYENQKAESGAGRFSTRDNHDIAYAGVASTVERVEQNRSVDGLRIYDKNHQVLKDNHLQAGEWANEPNAARVMHTERNRPLTLDERRELTAGYEKLATMLASPARQAQPEERAHIEQLRTAAQQGLSSVQAKVAEFEETNRNYQNEDPGMDSIIRKGTLIDAELRHEAYASKAMSPDQIKEIAAKDLEDYSFLQGKPEQQKLAVLMGGMMGEPDYRSAIYENPALDLDTSIAAATSIESQAEMTTTHDKTRDQGMEL
SIO_010081: NLY38_RS25550
subclass of: SO_0000673
so part of: NLY38_RS25550
location: complement(17185..18435)
location: region:17185-18435:-1
so has part: feature:17185-18435:-1:exon

WP_254348630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17185-18435:-1:exon

NLY38_RS25555
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25555
old locus tag: NLY38_25555
so part of: sequence
location: complement(18534..18842)
location: region:18534-18842:-1
so has part: feature:18534-18842:-1:exon
subclass of: SO_0000010

position:18534:-1
position: 18534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18842:-1
position: 18842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18534-18842:-1:exon

NLY38_RS25555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25555
old locus tag: NLY38_25555
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTTTERLARLETAQELLGFLIAGLSSEIHQLRKASAEPAAVATLVAKKNELADLEDSLSLDDAEAVERVIETFGPEVRSQRQAKQAVAGNNLSPVALSTSA
SIO_010081: NLY38_RS25555
subclass of: SO_0000673
so part of: NLY38_RS25555
location: complement(18534..18842)
location: region:18534-18842:-1
so has part: feature:18534-18842:-1:exon

WP_254348631.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18534-18842:-1:exon

NLY38_RS25560
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25560
old locus tag: NLY38_25560
so part of: sequence
location: complement(18940..23409)
location: region:18940-23409:-1
so has part: feature:18940-23409:-1:exon
subclass of: SO_0000010

position:18940:-1
position: 18940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23409:-1
position: 23409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18940-23409:-1:exon

NLY38_RS25560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25560
old locus tag: NLY38_25560
inference: COORDINATES: protein motif:HMM:NF015397.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LPD7 domain-containing protein
translation: MIIRYGGGNTGVAEYLENGRKVDRHYSRDELDRRIPIEGDLSVTQALYESIEDTGQERYLHISLSFNEPDVTEEDLREVFQQYKKEFMAAYGDDEYNIYAEIHWPKVKEAYNHNTEQMEPRYPHVHVVIPKKNLVTGGFLNPAGMHEQHVKYLDAIQEKLNRDNGLSSPRNSPRVGTNHYESALAKYKDKEFKSKNGELKRHIFDSMLSRDIRTEKDFKSLLGEYGEVRVRNQSKDNQYFAVKLPGDEKFTNLKANIFGRQFIEERALVLEPITDAQVARRVETWRAIRSKEIKYIHNASAKVKAEYKSLSLPARREFLEKWERSYVERYKQASSDKRPGIPGLSARDNLASNLKLAGGISTERARYLHELQASTVDHFNPQGQPANRLFLHGDADADIQHFQPERDSGLRSDLYDGSTAGGIIPLPSDGSRSSVVDSLLAEEAQRDSEKNDLKRFAEIRKNLDLQHLLAFAQIKYGIDPAQHAISHAKDGSPRIKAGKYNYNVSDFLTKHIGLDWSEASGVLQNLYDRQQSGVVDRPKPKEQHIDDWRRFRNEIYPKSVKTYDELKGQIKISYALGLKAINSEFYARRASITKDATLTRFDKHYFRSIVILEKLQKVEDLQQRIKEQNSVANRAKYPYSTLFYDFATKNEDLNMKVLDDLKRRFQTPAMDSENTIGARGPLTPKHMPDGAEAAKRARLLAKLQTQEREAKELKIKLADLRPRPLANNAVAFCHKDHGKQIFVNHPDRLELNRVTDQDEVGVALIYGVERFGSPLEINGTEQFKEQVIQVAAERDMDITFTDEAMNKALEAKRLELGLQPLTANSIAPQELEIDKTMPKEEAIDKALLASKVAELRAINAGALEQPNEAEREIYAAVVAEAQERHEEMAAAPFLDSERIEEIAREDFQAFAQLEGQPEQQQLAISMAQALENEHYKSFAEQNGPQELRLTIDATLALESEPEPVELAAEESAPVEPLSAERMASLSNQARNLETQASTLSAEIQQMRMAGSSQEQIQERETELAGLQAERAKTLLQVLPQMREEEFKAGASPERLERLDSAIQEAQATLAEGSQPERIEQSPAPELSAEEREQINQARADFGMEPMADPAQPSPAEPLQFTDSNGQPVSIDLSRFQQQPEPLTVERLQAEVEGYGRAEQEARGALEGLEQQREEQGMFLSEDDANALDERIAEAAQRVEDMAQAKERSQQELWAAAPELRPAPEQPEPLQFTNNGEPATINLDRFQQPEPPSVERLQAEVEGYGRAEQEAREVLAQLQQQRDQLGADLDPNDATALDERIVEASERVDSMALAKTQAQQELWEAAPELRPTEPQPLRFTHQGQPATLDLDRFTAPEQRLSPAVAAKVAELQAVNERAAEKPDVMAEIVSRGTVADATMRHDGIRDGSADRNAVREAARQDLVAFADLDGRPEQQQLAREIGSMMENPDYRDYMASHAPESVSLTVEATQAMDGARGISKEKEADKGMEL
SIO_010081: NLY38_RS25560
subclass of: SO_0000673
so part of: NLY38_RS25560
location: complement(18940..23409)
location: region:18940-23409:-1
so has part: feature:18940-23409:-1:exon

WP_254348632.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18940-23409:-1:exon

NLY38_RS25565
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
gene: mobC
locus tag: NLY38_RS25565
old locus tag: NLY38_25565
so part of: sequence
location: complement(23406..23819)
location: region:23406-23819:-1
so has part: feature:23406-23819:-1:exon
subclass of: SO_0000010

position:23406:-1
position: 23406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23819:-1
position: 23819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23406-23819:-1:exon

NLY38_RS25565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
gene: mobC
locus tag: NLY38_RS25565
old locus tag: NLY38_25565
inference: COORDINATES: protein motif:HMM:NF017524.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid mobilization relaxosome protein MobC
translation: MESKSGKSPKKKAEKPRKTREESVVISFRLPISEYEPYREPVEKSGLGRSEFFRQLFRENNSKIVISEKKHSTQDYKQYLHLVGKISNNINQLARLLNGAEKSNKITRQHYLNGLNMLQSISQLLKSKLGTSGKDKS
SIO_010081: NLY38_RS25565
subclass of: SO_0000673
so part of: NLY38_RS25565
location: complement(23406..23819)
location: region:23406-23819:-1
so has part: feature:23406-23819:-1:exon

WP_254348633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23406-23819:-1:exon

NLY38_RS25570
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25570
old locus tag: NLY38_25570
so part of: sequence
location: 24139..24555
location: region:24139-24555:1
so has part: feature:24139-24555:1:exon
subclass of: SO_0000010

position:24139:1
position: 24139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24555:1
position: 24555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24139-24555:1:exon

NLY38_RS25570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25570
old locus tag: NLY38_25570
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MSTDLIIAAARRIKGFEKLPVTAQLSLLLAEIEAARKHRLPLQVICEALNEAGSKVTLRYLREALSVVRKRNQGTPAAPHALPAAGIVKTSQTTKPQQTPGAVESENLTPKEAREQKAEAYVTGTSSNPLLNRQRENK
SIO_010081: NLY38_RS25570
subclass of: SO_0000673
so part of: NLY38_RS25570
location: 24139..24555
location: region:24139-24555:1
so has part: feature:24139-24555:1:exon

WP_254348634.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24139-24555:1:exon

NLY38_RS25575
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
gene: stbB
locus tag: NLY38_RS25575
old locus tag: NLY38_25575
so part of: sequence
location: 24567..25268
location: region:24567-25268:1
so has part: feature:24567-25268:1:exon
subclass of: SO_0000010

position:24567:1
position: 24567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25268:1
position: 25268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24567-25268:1:exon

NLY38_RS25575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
gene: stbB
locus tag: NLY38_RS25575
old locus tag: NLY38_25575
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002933279.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: StbB family protein
translation: MYVMVANFSGNSGKSTLADNLLAPRMNNAEVIRVETINAHEGDDADNLKGKQYGQIIEGLALFNDAIVDVGSSNVQDIMNLMAQYAGSWEVFDYFVIPTVAKPKQIRDTISTIEALANIGVPADKIRVVFNMIEDEDVNIEKEFAPLFAYHANEGKFTMNSGAVVYLNDFYSRVTGLGLTAEKILADETDYNQLLKDATTPDEKIAISQKRALKFLATGLKAKLDDAFKALFG
SIO_010081: NLY38_RS25575
subclass of: SO_0000673
so part of: NLY38_RS25575
location: 24567..25268
location: region:24567-25268:1
so has part: feature:24567-25268:1:exon

WP_254348635.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24567-25268:1:exon

NLY38_RS25580
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25580
old locus tag: NLY38_25580
so part of: sequence
location: 25274..25867
location: region:25274-25867:1
so has part: feature:25274-25867:1:exon
subclass of: SO_0000010

position:25274:1
position: 25274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25867:1
position: 25867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25274-25867:1:exon

NLY38_RS25580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25580
old locus tag: NLY38_25580
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSSEQKPAAALDDYKDAIIAMVAADVLRMKDDVEQLGPLVQQLKDGLPSHFDLLRAGLIETLDLINEGIKEAGGERIEYVKGQLSVFIEQAIEKAFAANSERIAQLMEQFEKQNNAAANNLREQYAAVSEGMSQMQKEIGKQRFPTWAKVIIPIALVVAVGCSSLISWQLASQKEAIYMQAFMQQLEAEKAPQNRK
SIO_010081: NLY38_RS25580
subclass of: SO_0000673
so part of: NLY38_RS25580
location: 25274..25867
location: region:25274-25867:1
so has part: feature:25274-25867:1:exon

WP_254348637.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25274-25867:1:exon

NLY38_RS25585
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25585
old locus tag: NLY38_25585
so part of: sequence
location: 25876..26172
location: region:25876-26172:1
so has part: feature:25876-26172:1:exon
subclass of: SO_0000010

position:25876:1
position: 25876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26172:1
position: 26172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25876-26172:1:exon

NLY38_RS25585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25585
old locus tag: NLY38_25585
inference: COORDINATES: protein motif:HMM:NF019069.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbM/KikA/MpfK family conjugal transfer protein
translation: MKKSGIFAGLLAATLSFGAMAKDPCGTELCLSDYEMAMQGGMCKQHIDDFFSIIKYRKDKFSPSKTLKARTDYLNKCESGNSSDKARILAKYGSILKP
SIO_010081: NLY38_RS25585
subclass of: SO_0000673
so part of: NLY38_RS25585
location: 25876..26172
location: region:25876-26172:1
so has part: feature:25876-26172:1:exon

WP_254348640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25876-26172:1:exon

NLY38_RS25590
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25590
old locus tag: NLY38_25590
so part of: sequence
location: 26234..26692
location: region:26234-26692:1
so has part: feature:26234-26692:1:exon
subclass of: SO_0000010

position:26234:1
position: 26234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26692:1
position: 26692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26234-26692:1:exon

NLY38_RS25590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25590
old locus tag: NLY38_25590
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSGYYQLRFSANTDLTIGDEWYNWQALENLPACQVFQFPPASELRFRLSPVAEAGEFAIIEIPLQAALDTMLPQMRYQLNPYRWHRVKQQLSQGEIENPEMGYGYSGADLMDGRHRIVAMMRLMGMDRAPFAVHPDRAEAVRDHFARLALQA
SIO_010081: NLY38_RS25590
subclass of: SO_0000673
so part of: NLY38_RS25590
location: 26234..26692
location: region:26234-26692:1
so has part: feature:26234-26692:1:exon

WP_254348642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26234-26692:1:exon

NLY38_RS25595
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25595
old locus tag: NLY38_25595
so part of: sequence
location: complement(27265..27675)
location: region:27265-27675:-1
so has part: feature:27265-27675:-1:exon
subclass of: SO_0000010

position:27265:-1
position: 27265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27675:-1
position: 27675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27265-27675:-1:exon

NLY38_RS25595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25595
old locus tag: NLY38_25595
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEEESRNEKGLLIEGAKGYFWDAVGFCAAGLLVFLALLTLAAVVSCFVSLGMFYTGVEIPEAYSLGGWIVPVAHVVVICVGLALVNPRRLPEALKKRGEAVRRERVAEAARERIAARGGYVDPHRNKSGSLGEGAQ
SIO_010081: NLY38_RS25595
subclass of: SO_0000673
so part of: NLY38_RS25595
location: complement(27265..27675)
location: region:27265-27675:-1
so has part: feature:27265-27675:-1:exon

WP_254348644.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27265-27675:-1:exon

NLY38_RS25600
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25600
old locus tag: NLY38_25600
so part of: sequence
location: complement(27740..28063)
location: region:27740-28063:-1
so has part: feature:27740-28063:-1:exon
subclass of: SO_0000010

position:27740:-1
position: 27740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28063:-1
position: 28063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27740-28063:-1:exon

NLY38_RS25600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25600
old locus tag: NLY38_25600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006762839.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MIEIECGSGNVFADIGAADPEEMLVKAQLAAKVAEIIEARKLKQAEAAELVGLTQPKLSGVLRGKLRGVSEAKLLDCLRRLGRDVQIVVGPARRQAEPGRLEVVMAR
SIO_010081: NLY38_RS25600
subclass of: SO_0000673
so part of: NLY38_RS25600
location: complement(27740..28063)
location: region:27740-28063:-1
so has part: feature:27740-28063:-1:exon

WP_254348646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27740-28063:-1:exon

NLY38_RS25605
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25605
old locus tag: NLY38_25605
so part of: sequence
location: complement(28060..28422)
location: region:28060-28422:-1
so has part: feature:28060-28422:-1:exon
subclass of: SO_0000010

position:28060:-1
position: 28060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28422:-1
position: 28422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28060-28422:-1:exon

NLY38_RS25605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25605
old locus tag: NLY38_25605
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019951365.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MEKTIKPLFWVGSARKDLQAMPEDVKDTFGFALHLAQLGRKASETKPLKGFGGAGVLEVVESTVSGTYRAVYTVKFGDAVYVLHCFQKKSTHGIATPKPDMDVINERLKAAEMHAKGERK
SIO_010081: NLY38_RS25605
subclass of: SO_0000673
so part of: NLY38_RS25605
location: complement(28060..28422)
location: region:28060-28422:-1
so has part: feature:28060-28422:-1:exon

WP_254348648.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28060-28422:-1:exon

NLY38_RS25610
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25610
old locus tag: NLY38_25610
so part of: sequence
location: complement(28568..28831)
location: region:28568-28831:-1
so has part: feature:28568-28831:-1:exon
subclass of: SO_0000010

position:28568:-1
position: 28568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28831:-1
position: 28831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28568-28831:-1:exon

NLY38_RS25610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25610
old locus tag: NLY38_25610
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKGKFRYSRDTAQSAHPVGARVRGIFYGIPYRGVVTSSTPHSQSLAHIHQVKLDQPISVFGVQRDLIHVPIWEPEPSGHTIEKDHTA
SIO_010081: NLY38_RS25610
subclass of: SO_0000673
so part of: NLY38_RS25610
location: complement(28568..28831)
location: region:28568-28831:-1
so has part: feature:28568-28831:-1:exon

WP_254348650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28568-28831:-1:exon

NLY38_RS25615
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25615
old locus tag: NLY38_25615
so part of: sequence
location: complement(28877..29428)
location: region:28877-29428:-1
so has part: feature:28877-29428:-1:exon
subclass of: SO_0000010

position:28877:-1
position: 28877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29428:-1
position: 29428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28877-29428:-1:exon

NLY38_RS25615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25615
old locus tag: NLY38_25615
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKEIARITPADFTEIKRDDALGVLVVASADRLKVMAFKGRKKRHDFYFRFPTQERAEQYVADWLREIEEQAARARARREQPHPLTVGQVLVSSWGYDQTNIDYYEVVGLAGAHFVLIRPIRAEVKGYCGQAMSGLCVPVPGDYQGEAIRRRASAEGAVKLDSFRYAHPRAEGREAERFTTYA
SIO_010081: NLY38_RS25615
subclass of: SO_0000673
so part of: NLY38_RS25615
location: complement(28877..29428)
location: region:28877-29428:-1
so has part: feature:28877-29428:-1:exon

WP_254348652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28877-29428:-1:exon

NLY38_RS25620
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25620
old locus tag: NLY38_25620
so part of: sequence
location: complement(29439..29669)
location: region:29439-29669:-1
so has part: feature:29439-29669:-1:exon
subclass of: SO_0000010

position:29439:-1
position: 29439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29669:-1
position: 29669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29439-29669:-1:exon

NLY38_RS25620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25620
old locus tag: NLY38_25620
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKAAQLKQAMVKKAQGMTLQQLIEAFELTNATNGPEIPEVRGVLMDVLEARNAQAFEAWIDSCAESPRAFFLNAA
SIO_010081: NLY38_RS25620
subclass of: SO_0000673
so part of: NLY38_RS25620
location: complement(29439..29669)
location: region:29439-29669:-1
so has part: feature:29439-29669:-1:exon

WP_254348654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29439-29669:-1:exon

NLY38_RS25625
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25625
old locus tag: NLY38_25625
so part of: sequence
location: 30836..30979
location: region:30836-30979:1
so has part: feature:30836-30979:1:exon
subclass of: SO_0000010

position:30836:1
position: 30836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30979:1
position: 30979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30836-30979:1:exon

NLY38_RS25625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25625
old locus tag: NLY38_25625
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRDHLYPLASLLVNIATLALGVFMYLQAEKAPEPAPLAKPAPMYAQR
SIO_010081: NLY38_RS25625
subclass of: SO_0000673
so part of: NLY38_RS25625
location: 30836..30979
location: region:30836-30979:1
so has part: feature:30836-30979:1:exon

WP_254348656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30836-30979:1:exon

NLY38_RS25630
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25630
old locus tag: NLY38_25630
so part of: sequence
location: complement(30976..32748)
location: region:30976-32748:-1
so has part: feature:30976-32748:-1:exon
subclass of: SO_0000010

position:30976:-1
position: 30976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32748:-1
position: 32748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30976-32748:-1:exon

NLY38_RS25630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25630
old locus tag: NLY38_25630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020191957.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA cytosine methyltransferase
translation: MTAALNPQALDRLAEAIHWQTQYQLPLTASDDEIIVDDFCGGGGGSTGLEMGLGRPIALARNHSAAAISMHEANHPHALHLATDVFDGDPRELVGGRRVGWYHLSPDCTHHSQAAGGQPRKKEIRNLSWIALKWAGRVRPRVISLENVEQVKNWGRLIAKRDAKTGRVIKLVRVIRKGKERVKKVVAAPGERVPVQDQYLVPDPAHKGETWRHFVAQLEGMGYAVEWRVLRACDYGAPTTRKRLFMIARCDGQPIVWPEPTHAENPRPWQSPWRTAGECIDWSYPTQSIFGRERPLVEATLRRIAKGCVKYVLGAADPFIVPIANWSAGDTVQSTRAPLRTVTAWPKGGAFALASPVIAPLTHQGADRAYSAQAPLPTVTGANRGEQALFASYMVQANGGKNTTAAHSMRAPTSTITVAGSQQQLTSAHLVTLRKNCVGRSCDEPLPTVTAGAEHHGLIEYTLAPEHAAGALRVAAFIMQFYSTGGQWGPLNKPLNTITTKDRLALVTVVLDGTPYVIVDICMRMLQPHELYRAQGFPASYIIDRGHDGRAFTKTEQVRMCGNSVSPPVLAAIAAANDPWRPAALAEMAA
SIO_010081: NLY38_RS25630
subclass of: SO_0000673
so part of: NLY38_RS25630
location: complement(30976..32748)
location: region:30976-32748:-1
so has part: feature:30976-32748:-1:exon

WP_254348657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30976-32748:-1:exon

NLY38_RS25635
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25635
old locus tag: NLY38_25635
so part of: sequence
location: complement(32745..32975)
location: region:32745-32975:-1
so has part: feature:32745-32975:-1:exon
subclass of: SO_0000010

position:32745:-1
position: 32745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32975:-1
position: 32975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32745-32975:-1:exon

NLY38_RS25635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25635
old locus tag: NLY38_25635
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKGIGPITFKAGDQARRVETFDLLQFADGFSFGVATELEAFQAAYAYQHCERVSVEPAADGSGWRVQVYRAGAAV
SIO_010081: NLY38_RS25635
subclass of: SO_0000673
so part of: NLY38_RS25635
location: complement(32745..32975)
location: region:32745-32975:-1
so has part: feature:32745-32975:-1:exon

WP_254348658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32745-32975:-1:exon

NLY38_RS25640
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25640
old locus tag: NLY38_25640
so part of: sequence
location: complement(32989..33390)
location: region:32989-33390:-1
so has part: feature:32989-33390:-1:exon
subclass of: SO_0000010

position:32989:-1
position: 32989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33390:-1
position: 33390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32989-33390:-1:exon

NLY38_RS25640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25640
old locus tag: NLY38_25640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017113439.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFEEADIVSTYTRAQALADGELVDVTATAREAGFTLPTAVTRAVWIDCIQWGEAEKKAKPRACQDQEGRLWDVVYMAFLAARRAPQSSRTSYSIHRVPADGQGLHARRVELILRVTPGDQGEPVITICQPLED
SIO_010081: NLY38_RS25640
subclass of: SO_0000673
so part of: NLY38_RS25640
location: complement(32989..33390)
location: region:32989-33390:-1
so has part: feature:32989-33390:-1:exon

WP_254348659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32989-33390:-1:exon

NLY38_RS25645
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25645
old locus tag: NLY38_25645
so part of: sequence
location: complement(33563..33943)
location: region:33563-33943:-1
so has part: feature:33563-33943:-1:exon
subclass of: SO_0000010

position:33563:-1
position: 33563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33943:-1
position: 33943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33563-33943:-1:exon

NLY38_RS25645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25645
old locus tag: NLY38_25645
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEDGLIIQRLEALPERQRFALAMYAHARFRHGRSVRHSILGVLLIGVGALLVRAVGLPAGAGIEQDLARVADFFGVLAVIFAGLSPLTMTAIVRRERRAAIDAGAPLDLVDYFGRMPTRWLSNGLD
SIO_010081: NLY38_RS25645
subclass of: SO_0000673
so part of: NLY38_RS25645
location: complement(33563..33943)
location: region:33563-33943:-1
so has part: feature:33563-33943:-1:exon

WP_254348660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33563-33943:-1:exon

NLY38_RS25650
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25650
old locus tag: NLY38_25650
so part of: sequence
location: complement(33993..34217)
location: region:33993-34217:-1
so has part: feature:33993-34217:-1:exon
subclass of: SO_0000010

position:33993:-1
position: 33993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34217:-1
position: 34217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33993-34217:-1:exon

NLY38_RS25650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25650
old locus tag: NLY38_25650
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: YgdI/YgdR family lipoprotein
translation: MKRHAIACALVACCAVLAGCAGKASTPSLNGGQTYRLDGEALGVPVSGAVRVGIGSRGLYLQPSFNMRQIRLSK
SIO_010081: NLY38_RS25650
subclass of: SO_0000673
so part of: NLY38_RS25650
location: complement(33993..34217)
location: region:33993-34217:-1
so has part: feature:33993-34217:-1:exon

WP_254348662.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33993-34217:-1:exon

NLY38_RS25655
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25655
old locus tag: NLY38_25655
so part of: sequence
location: complement(34214..34468)
location: region:34214-34468:-1
so has part: feature:34214-34468:-1:exon
subclass of: SO_0000010

position:34214:-1
position: 34214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34468:-1
position: 34468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34214-34468:-1:exon

NLY38_RS25655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25655
old locus tag: NLY38_25655
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSQEAKPLSREQQLRLIYRHTHKDYKGEINGVKGILVLRQSGSCSVPLEQLTDAEIADRLPYAMKKEAARIEAKSAAKGKGGAA
SIO_010081: NLY38_RS25655
subclass of: SO_0000673
so part of: NLY38_RS25655
location: complement(34214..34468)
location: region:34214-34468:-1
so has part: feature:34214-34468:-1:exon

WP_254348664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34214-34468:-1:exon

NLY38_RS25660
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25660
old locus tag: NLY38_25660
so part of: sequence
location: complement(34590..35039)
location: region:34590-35039:-1
so has part: feature:34590-35039:-1:exon
subclass of: SO_0000010

position:34590:-1
position: 34590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35039:-1
position: 35039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34590-35039:-1:exon

NLY38_RS25660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25660
old locus tag: NLY38_25660
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTISIGEKVETVIFSRSSGAHGQYLGSTAQTFGAARVEGMTFKVGNFSEIGLFKVFHVESGLFEEIEDRYEIPCAVDRLAKRAREHGKAQALAHLQRAGFKAKAFGESIRVIDPNYTMSGSERREGSNVVTLRGNDLQAAAWQFVDARS
SIO_010081: NLY38_RS25660
subclass of: SO_0000673
so part of: NLY38_RS25660
location: complement(34590..35039)
location: region:34590-35039:-1
so has part: feature:34590-35039:-1:exon

WP_254348666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34590-35039:-1:exon

NLY38_RS25665
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25665
old locus tag: NLY38_25665
so part of: sequence
location: complement(35736..36092)
location: region:35736-36092:-1
so has part: feature:35736-36092:-1:exon
subclass of: SO_0000010

position:35736:-1
position: 35736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36092:-1
position: 36092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35736-36092:-1:exon

NLY38_RS25665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25665
old locus tag: NLY38_25665
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEQYTLTLAEEVAAMLPAFAVSLAACLAWFLACRRIMRARDLAWLASLPVVPALAPTGELQAQLKAAELRLSALQALSAAHGAGRPSDRLFGAGLFVAMLCAAAVFLFCLVSRNPSPF
SIO_010081: NLY38_RS25665
subclass of: SO_0000673
so part of: NLY38_RS25665
location: complement(35736..36092)
location: region:35736-36092:-1
so has part: feature:35736-36092:-1:exon

WP_254348668.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35736-36092:-1:exon

NLY38_RS25670
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25670
old locus tag: NLY38_25670
pseudo: true
so part of: sequence
location: complement(36340..>38379)
location: region:36340-38379:-1
so has part: feature:36340-38379:-1:exon
subclass of: SO_0000010

position:36340:-1
position: 36340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38379:-1
position: 38379
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36340-38379:-1:exon

NLY38_RS25670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25670
old locus tag: NLY38_25670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_032490160.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Tn3 family transposase
SIO_010081: NLY38_RS25670
subclass of: SO_0000673
so part of: NLY38_RS25670
location: complement(36340..>38379)
location: region:36340-38379:-1
so has part: feature:36340-38379:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36340-38379:-1:exon

NLY38_RS25675
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25675
old locus tag: NLY38_25675
so part of: sequence
location: 38436..39452
location: region:38436-39452:1
so has part: feature:38436-39452:1:exon
subclass of: SO_0000010

position:38436:1
position: 38436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39452:1
position: 39452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38436-39452:1:exon

NLY38_RS25675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25675
old locus tag: NLY38_25675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612041.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MSYHELSIEERVTIQIGQMNGLSQRAIAGLLGRSPSTVSRELRRNSRPKAAYVAHLAQSQTLKRRKVCRPARRLLPGSELFELVIALLRQRFSPEQIAGKLRSMSIPSFEDAYVCRETIYNAIYALPVGELRKELIICLRQGKSSRRPRSGGVDRRGQIPDMVSIHVRPPEIEDRLMPGHWEGDLIKGKGNASSVGTLVERTSGYLMLVKMRDATATSAMEGFSAALNRMPLAVRKSMTYDQGREMARHAEITQNTGVAIYFCDPHSPWQRGSNENINGLIRQFLPKGTDLSVHSQEQLDEIAYLMNIRPRKRFNWKCPIEVMTEVVGMHHAAPASIQ
SIO_010081: NLY38_RS25675
subclass of: SO_0000673
so part of: NLY38_RS25675
location: 38436..39452
location: region:38436-39452:1
so has part: feature:38436-39452:1:exon

WP_114012834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38436-39452:1:exon

NLY38_RS25680
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25680
old locus tag: NLY38_25680
pseudo: true
so part of: sequence
location: complement(<39478..40458)
location: region:39478-40458:-1
so has part: feature:39478-40458:-1:exon
subclass of: SO_0000010

position:39478:-1
position: 39478
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:40458:-1
position: 40458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39478-40458:-1:exon

NLY38_RS25680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25680
old locus tag: NLY38_25680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_032490160.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF4158 domain-containing protein
SIO_010081: NLY38_RS25680
subclass of: SO_0000673
so part of: NLY38_RS25680
location: complement(<39478..40458)
location: region:39478-40458:-1
so has part: feature:39478-40458:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39478-40458:-1:exon

NLY38_RS25685
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25685
old locus tag: NLY38_25685
pseudo: true
so part of: sequence
location: <40603..41778
location: region:40603-41778:1
so has part: feature:40603-41778:1:exon
subclass of: SO_0000010

position:40603:1
position: 40603
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:41778:1
position: 41778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40603-41778:1:exon

NLY38_RS25685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25685
old locus tag: NLY38_25685
inference: COORDINATES: similar to AA sequence:RefSeq:NP_248989.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO process: GO:0006542 - glutamine biosynthetic process [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glutamine synthetase family protein
SIO_010081: NLY38_RS25685
subclass of: SO_0000673
so part of: NLY38_RS25685
location: <40603..41778
location: region:40603-41778:1
so has part: feature:40603-41778:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40603-41778:1:exon

NLY38_RS25690
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25690
old locus tag: NLY38_25690
so part of: sequence
location: 41860..43230
location: region:41860-43230:1
so has part: feature:41860-43230:1:exon
subclass of: SO_0000010

position:41860:1
position: 41860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43230:1
position: 43230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41860-43230:1:exon

NLY38_RS25690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25690
old locus tag: NLY38_25690
inference: COORDINATES: similar to AA sequence:RefSeq:NP_248990.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate aminotransferase family protein
translation: MSNATNPKTSEWQAMSREHHLAPFSDYQQLHEKGPRIITRADGVYLWDSEGHKILDGMAGLWCVAVGYGREELVEAAAAQMRELPFYNTFFQTAHPPALELARAIAEVAPEGMNHVFFTGSGSEGNDTMLRLVRHYWALKGQPQKKVIISRHNGYHGSTVAGASLGGMKAMHEQGDLPIPGIVHIPQPYWFGEGGDMTPEEFGIWAADQLEKKILEVGEDNVAAFIAEPIQGAGGVIIPPETYWPRIREILARYDILFVADEVICGFGRTGEWFGSDYYGNSPDLMTIAKGLTSGYVPMGGLIVSDKVFQVINAGGDFNHGFTYSGHPVAAAVGLANLRILREEQIIERVRCETAPYLQKRLRELADHPLVGEVRGVGMLGAIELAKNKQTRERFPGELGVGMICRGHCFENGLIMRAVGDTMIIAPPLVISKEEIDELVAKARKCLDLTAQAVLV
SIO_010081: NLY38_RS25690
subclass of: SO_0000673
so part of: NLY38_RS25690
location: 41860..43230
location: region:41860-43230:1
so has part: feature:41860-43230:1:exon

WP_254300329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41860-43230:1:exon

NLY38_RS25695
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25695
old locus tag: NLY38_25695
so part of: sequence
location: 43356..44438
location: region:43356-44438:1
so has part: feature:43356-44438:1:exon
subclass of: SO_0000010

position:43356:1
position: 43356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44438:1
position: 44438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43356-44438:1:exon

NLY38_RS25695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25695
old locus tag: NLY38_25695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008569251.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyamine ABC transporter substrate-binding protein
translation: MKTFGKTLLAMTVAASMAGVAQADDKVLHVFNWSDYIAPETLNKFTQETGIKVVYDVFDSNEVLEAKLLAGSSGYDIVVPSNPFLAKQIKAGVFQKLDRAKLPNWSNLDTNLLNALSPSDPGNQYSIPYMWGTIGIAHNVDKVKAVLGDNAPIDSWDLVFKPENIAKLKECGVAFIDSPTEVLPAALNYLGFSPTSEKADELKKAEELFLSIRKDITYFHSSKYIGDMANGNICVAVGVSGYLYQSKARAEEAKNGEEIVYKIPKEGASSFFDMLAIPADAKNVEGAHAFLNFLMKPEIMAEISNYTQFPSGNAAAEAIRNDPGIYPDAETMAKIYTLPDLPAKVSRTMNRSWTTIKSGK
SIO_010081: NLY38_RS25695
subclass of: SO_0000673
so part of: NLY38_RS25695
location: 43356..44438
location: region:43356-44438:1
so has part: feature:43356-44438:1:exon

WP_302054906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43356-44438:1:exon

NLY38_RS25700
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25700
old locus tag: NLY38_25700
pseudo: true
so part of: sequence
location: 44704..>44919
location: region:44704-44919:1
so has part: feature:44704-44919:1:exon
subclass of: SO_0000010

position:44704:1
position: 44704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44919:1
position: 44919
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44704-44919:1:exon

NLY38_RS25700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25700
old locus tag: NLY38_25700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014340742.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: spermidine/putrescine ABC transporter substrate-binding protein PotF
SIO_010081: NLY38_RS25700
subclass of: SO_0000673
so part of: NLY38_RS25700
location: 44704..>44919
location: region:44704-44919:1
so has part: feature:44704-44919:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:44704-44919:1:exon

NLY38_RS25705
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25705
old locus tag: NLY38_25705
so part of: sequence
location: complement(45036..45719)
location: region:45036-45719:-1
so has part: feature:45036-45719:-1:exon
subclass of: SO_0000010

position:45036:-1
position: 45036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45719:-1
position: 45719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45036-45719:-1:exon

NLY38_RS25705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25705
old locus tag: NLY38_25705
inference: COORDINATES: protein motif:HMM:NF016819.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HupE/UreJ family protein
translation: MNTTTNTTKIMRFAAAVAVAYAASTMPSYAHSLPEAGGLGAGLSHPLSGLDHILAMAGVGIWAGLSHPLSGLDHILAMAGVGIWAGQNADNEPYFRWLPLGFVIGMIAGAVFGMTGLSLPFVELGIAGSVVLLGAIVALGSRVPFGAAFAMTVAFGGLHGFAHGQELPIASNAFLYGLGFVASTVVLHALGFSLASFVARLSWRSALKVGGGGIAAAGVVLAAGLAG
SIO_010081: NLY38_RS25705
subclass of: SO_0000673
so part of: NLY38_RS25705
location: complement(45036..45719)
location: region:45036-45719:-1
so has part: feature:45036-45719:-1:exon

WP_254348671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45036-45719:-1:exon

NLY38_RS25710
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25710
old locus tag: NLY38_25710
so part of: sequence
location: complement(45767..46813)
location: region:45767-46813:-1
so has part: feature:45767-46813:-1:exon
subclass of: SO_0000010

position:45767:-1
position: 45767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46813:-1
position: 46813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45767-46813:-1:exon

NLY38_RS25710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25710
old locus tag: NLY38_25710
inference: COORDINATES: protein motif:HMM:NF012703.2
GO function: GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arginase family protein
translation: MNPAKSYAHLFSPLGGDAGDNYRAPGLITFLRSAHVPLNAEALKACGAKYAFVGVPFDEGNIGKPGSEDAPREFRLITQEYFSYWFEYNVDLHGKAVDCGDVSMPKVSPEVAHERIYRAVREVLKSGLIPIICGGDRSISITAARALSDHIGPQKKMGYMHFGAQLDMADSWAGERNLAPCAMARITELPNLDIRNVAHLGARNAMNPKDHIDLSKERGLQYDSMFDLFDAGIYPLVERSIDRVWSGTDAQYLGFNFNVMDSSTAPGVTSTEPGGLESREMMRIVDMIAKRGGVSVIDLTELCPIFDISGTAARLAACVIMRLMASLAAQDGDVIDDKLRRTDLVAAE
SIO_010081: NLY38_RS25710
subclass of: SO_0000673
so part of: NLY38_RS25710
location: complement(45767..46813)
location: region:45767-46813:-1
so has part: feature:45767-46813:-1:exon

WP_254300332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45767-46813:-1:exon

NLY38_RS25715
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25715
old locus tag: NLY38_25715
so part of: sequence
location: complement(46839..47912)
location: region:46839-47912:-1
so has part: feature:46839-47912:-1:exon
subclass of: SO_0000010

position:46839:-1
position: 46839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47912:-1
position: 47912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46839-47912:-1:exon

NLY38_RS25715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25715
old locus tag: NLY38_25715
inference: COORDINATES: protein motif:HMM:NF012703.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: agmatinase family protein
translation: MLDRKTETAKWQFTPHQHRGPAEQFGENDHIYSPKLHNGSFKSRGLATFMGAPYCPPDRHKIREMGAKICFLAVPWDQGQIVRAGASQGAAALRDATTQYFPYMFEYDVDLLSFFRVVDCGDVPNVPGNNIKSQEYTADYVTECLEGGAKVILFGGDHSLPIPGAKALSRFTGSGKMGYLHVDCHLDAAPDWAGNLITNCSGAPRALDLPNCNARNMAHMGSRNGLNPKDWWDFYVDNEIRVVTMSEMIERGLEVCANEIFERVKKDTDSLYFTWDTDSIDISCMPGNSAPECYGLKGREVIQLARIAGRHGCDILDIVEYCPYFDPSQIGAKMTVNMIYHYLGSRAQTLRQQGKQP
SIO_010081: NLY38_RS25715
subclass of: SO_0000673
so part of: NLY38_RS25715
location: complement(46839..47912)
location: region:46839-47912:-1
so has part: feature:46839-47912:-1:exon

WP_254348553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46839-47912:-1:exon

NLY38_RS25720
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25720
old locus tag: NLY38_25720
so part of: sequence
location: complement(47934..48320)
location: region:47934-48320:-1
so has part: feature:47934-48320:-1:exon
subclass of: SO_0000010

position:47934:-1
position: 47934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48320:-1
position: 48320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47934-48320:-1:exon

NLY38_RS25720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25720
old locus tag: NLY38_25720
inference: COORDINATES: protein motif:HMM:NF013334.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydrogenase maturation nickel metallochaperone HypA
translation: MHELTIASSLIDLASDHAARNGRARVIGMHVRLGVMCGIARSLYFCFGPATRGTLCEGAKLHIEEVPLTIFCEHCAEVRSPLSLSNLRCPDCGRPSRKVLSGREMELIHIELEEEAQHPAAQARQALQ
SIO_010081: NLY38_RS25720
subclass of: SO_0000673
so part of: NLY38_RS25720
location: complement(47934..48320)
location: region:47934-48320:-1
so has part: feature:47934-48320:-1:exon

WP_254300334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47934-48320:-1:exon

NLY38_RS25725
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
gene: hypB
locus tag: NLY38_RS25725
old locus tag: NLY38_25725
so part of: sequence
location: complement(48330..49349)
location: region:48330-49349:-1
so has part: feature:48330-49349:-1:exon
subclass of: SO_0000010

position:48330:-1
position: 48330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49349:-1
position: 49349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48330-49349:-1:exon

NLY38_RS25725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
gene: hypB
locus tag: NLY38_RS25725
old locus tag: NLY38_25725
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002706882.1
GO function: GO:0016530 - metallochaperone activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydrogenase nickel incorporation protein HypB
translation: MCQVCGCGPENIRIDGKSGGGDHEHLHAHHHDDDDHHHHHDGHHHHDHDDGHHHHHHGDAHGHVHGDGDMHEHRHSVAGAGPGDLHFGKDAAKTHVPGMSQKRLVQIEQDILAKNGMFADDVRDELSAHGVLALNLIASPGAGKTTLLVETLQRLKGTFPTWVIEGDQETTNDADRIRATDTQAVQINTGKGCHLDADMIQRALASLSLRQGGVLFIENVGNLACPAGFDLGEAHKVVILSVTEGDDKPVKYPEAFAAADLLVISKSDLAPYCDFDIEACVARAREVNPAIESIVVSARDGTGMTEWLEWIVRARQQQLQDLARDLQARVDSICNTLHA
SIO_010081: NLY38_RS25725
subclass of: SO_0000673
so part of: NLY38_RS25725
location: complement(48330..49349)
location: region:48330-49349:-1
so has part: feature:48330-49349:-1:exon

WP_254300335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48330-49349:-1:exon

NLY38_RS25730
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25730
old locus tag: NLY38_25730
so part of: sequence
location: complement(49352..50056)
location: region:49352-50056:-1
so has part: feature:49352-50056:-1:exon
subclass of: SO_0000010

position:49352:-1
position: 49352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50056:-1
position: 50056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49352-50056:-1:exon

NLY38_RS25730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25730
old locus tag: NLY38_25730
inference: COORDINATES: protein motif:HMM:NF012655.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MEFAALIHLKDRVKSVKRATTRLYRNPGVRAESLLEAALECFADEDYGRVTIPLIAKKMGVAHSLIYYYFKNKESLYQSSVLHALDRMMTRYSELVAQHESPAERLSACLDLNVEMSETLRSLARIMFVNACGPKDSGPKFIDSFVEDYYESEKRLFADCIHTGVEAGIFSCPDPDEMAAFISRNIDGIYFGCFMPHGTPIPAAMRYLKGVIWGLLDYAGDPSAKSPSTSKSGR
SIO_010081: NLY38_RS25730
subclass of: SO_0000673
so part of: NLY38_RS25730
location: complement(49352..50056)
location: region:49352-50056:-1
so has part: feature:49352-50056:-1:exon

WP_254348554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49352-50056:-1:exon

NLY38_RS25735
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25735
old locus tag: NLY38_25735
so part of: sequence
location: 50757..50948
location: region:50757-50948:1
so has part: feature:50757-50948:1:exon
subclass of: SO_0000010

position:50757:1
position: 50757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50948:1
position: 50948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50757-50948:1:exon

NLY38_RS25735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25735
old locus tag: NLY38_25735
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTIAATSPDNEIRRELNRRLNIIADPNYEDPARTDISGREIGMWFAVTSFILVVAIAMWIGGN
SIO_010081: NLY38_RS25735
subclass of: SO_0000673
so part of: NLY38_RS25735
location: 50757..50948
location: region:50757-50948:1
so has part: feature:50757-50948:1:exon

WP_254348555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50757-50948:1:exon

NLY38_RS25740
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25740
old locus tag: NLY38_25740
so part of: sequence
location: 51053..52360
location: region:51053-52360:1
so has part: feature:51053-52360:1:exon
subclass of: SO_0000010

position:51053:1
position: 51053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52360:1
position: 52360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51053-52360:1:exon

NLY38_RS25740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25740
old locus tag: NLY38_25740
inference: COORDINATES: protein motif:HMM:NF014218.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytosine permease
translation: MGLAIATWAFLFGGTTALLVGARDGIYAIIIGNVIGVSIMAVSVCISTGKFGIEQFTLMRSVFGPIGIPILVGIFLAIYGVGWSAILSIMFGRAISGAMNQVGGTHIGENDLGVTLFAILAIAISWLLLWKGPTAVKWLNRFVGPGKLILCFGILFLIFSHKSWSDISSAAPLAPFDDHRLNFMIAVEFNLAGGFGWWPVLGNITRFTRTPRAALWPNLIGVFAASVLGETVGLFAALSLGSSDPTAWMIPLGGAFVGVTALLFVGLANITAIVSFFYGMCLAMRQAGGRYFEALPWGLLTGALFVPAIVLTFFPGEIYDNFSKFLAWTALGFAPLSGVTAMDYLVLRRGRIKQCDVFNDGADSDYAFWRGINPASFLALVGGGLVYYALFDPQSLAAHGPFVWISASVPACLVAAILHYVLTKTIVMPARRGGY
SIO_010081: NLY38_RS25740
subclass of: SO_0000673
so part of: NLY38_RS25740
location: 51053..52360
location: region:51053-52360:1
so has part: feature:51053-52360:1:exon

WP_302055167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51053-52360:1:exon

NLY38_RS25745
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25745
old locus tag: NLY38_25745
so part of: sequence
location: 52387..53028
location: region:52387-53028:1
so has part: feature:52387-53028:1:exon
subclass of: SO_0000010

position:52387:1
position: 52387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53028:1
position: 53028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52387-53028:1:exon

NLY38_RS25745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25745
old locus tag: NLY38_25745
inference: COORDINATES: protein motif:HMM:NF019498.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XRE family transcriptional regulator
translation: MTDHPPHAIPSTIDPDPKVKRAREPLLHTAIGREVRAFRTRHGMKVSDLAAATNLSVGMLSKIENGGISPSLTTLQAISRGLAVPITWLVSRFETECTAVFVKAGSDAVPNSKAARQQCKPLGHTDVNANGLLVEPHLISLTCETDVFPAAGHQGTVFLYLLQGEISYRHGASIYRMSPGDSLFFDATIQHGAEKPAQLPVRCLSIMTRRRDR
SIO_010081: NLY38_RS25745
subclass of: SO_0000673
so part of: NLY38_RS25745
location: 52387..53028
location: region:52387-53028:1
so has part: feature:52387-53028:1:exon

WP_267322170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52387-53028:1:exon

NLY38_RS25750
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25750
old locus tag: NLY38_25750
so part of: sequence
location: complement(53306..54441)
location: region:53306-54441:-1
so has part: feature:53306-54441:-1:exon
subclass of: SO_0000010

position:53306:-1
position: 53306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54441:-1
position: 54441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53306-54441:-1:exon

NLY38_RS25750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25750
old locus tag: NLY38_25750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612067.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MKTRRRFTAEFKAKVALEAIRGERTISELATKYQLHPNQITQWKRQAIENLAKAFDDKASDPQVGREAEVTKLHAKIGQLVVERGFFGQGLRSLSLDRRRMMIDPDHKRLSIRRQCELVSISRASFYRQPAGETLENLELMRIIDEAFMEMPWYGSRQMARHLRRQGWNVGRKRVRRLMRKIGLSPIYQAPKTSEPHPQHRIYPYLLRHLAIERPNQVWCADVTYIPMRRGFLYLVAVMDWFSRKVLAWRLSNTMDADFCVAALEEAIARHGRPDIFNTDQGSQFTSFAFTTTLKDAGIRISMDGRGRWMDNVFIERLWRSLKYECVFLNAFETGSEARSGIGSWIDYYNRRRPHSTFHGRTPDEVYDIAQVTEQLAA
SIO_010081: NLY38_RS25750
subclass of: SO_0000673
so part of: NLY38_RS25750
location: complement(join(53306..54189,54189..54441))
location: region:53306-54441:-1
so has part: feature:54189-54441:-1:exon
so has part: feature:53306-54189:-1:exon

WP_254348557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54189-54441:-1:exon

position:54189:-1
position: 54189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:53306-54189:-1:exon

NLY38_RS25755
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25755
old locus tag: NLY38_25755
pseudo: true
so part of: sequence
location: complement(54569..>54964)
location: region:54569-54964:-1
so has part: feature:54569-54964:-1:exon
subclass of: SO_0000010

position:54569:-1
position: 54569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54964:-1
position: 54964
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54569-54964:-1:exon

NLY38_RS25755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25755
old locus tag: NLY38_25755
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018860470.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - DNA transposition [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: NLY38_RS25755
subclass of: SO_0000673
so part of: NLY38_RS25755
location: complement(54569..>54964)
location: region:54569-54964:-1
so has part: feature:54569-54964:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54569-54964:-1:exon

NLY38_RS25760
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25760
old locus tag: NLY38_25760
so part of: sequence
location: 55359..55964
location: region:55359-55964:1
so has part: feature:55359-55964:1:exon
subclass of: SO_0000010

position:55359:1
position: 55359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55964:1
position: 55964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55359-55964:1:exon

NLY38_RS25760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25760
old locus tag: NLY38_25760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001231163.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLVGYMRVSTSDERQSVGLQRDALLGAGIDERHLHQDRASGARDDRPGLKACMADLRAGDVLMVWKLDRLGRSLSHLIRIVEELKQRGVAFRSLTEAIDTTSPHGSFLFNLFGTLAEYERALITERVNAGLAAARRRGRKGGRPPSIDGEKINQILAALEGGASKASVCRSFKVPRSTLIDMLKRTGWTGAGTIDKAMSAG
SIO_010081: NLY38_RS25760
subclass of: SO_0000673
so part of: NLY38_RS25760
location: 55359..55964
location: region:55359-55964:1
so has part: feature:55359-55964:1:exon

WP_254348559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55359-55964:1:exon

NLY38_RS25765
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25765
old locus tag: NLY38_25765
pseudo: true
so part of: sequence
location: 55982..>56422
location: region:55982-56422:1
so has part: feature:55982-56422:1:exon
subclass of: SO_0000010

position:55982:1
position: 55982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56422:1
position: 56422
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55982-56422:1:exon

NLY38_RS25765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25765
old locus tag: NLY38_25765
inference: COORDINATES: protein motif:HMM:NF025079.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF4158 domain-containing protein
SIO_010081: NLY38_RS25765
subclass of: SO_0000673
so part of: NLY38_RS25765
location: 55982..>56422
location: region:55982-56422:1
so has part: feature:55982-56422:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55982-56422:1:exon

NLY38_RS25770
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25770
old locus tag: NLY38_25770
so part of: sequence
location: complement(56441..59482)
location: region:56441-59482:-1
so has part: feature:56441-59482:-1:exon
subclass of: SO_0000010

position:56441:-1
position: 56441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59482:-1
position: 59482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56441-59482:-1:exon

NLY38_RS25770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25770
old locus tag: NLY38_25770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008293723.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MAFEERVQILSEAEQDELYGPPAFTSADQRFFFSLNDKELAVAKSVRHRAQRYMFVVLLGYFKAKPVVLNPGFHQIKQDLKYVYQTVLPGPGCRPFNLTPKENERIYQRVFQLRNYQRWNAKAHGVALSDYLSQQARAWTAPRHLFDAAIEYCSGQKIASPAYSTLQKMISQVVRDEQERMADRLERAMSGNLKQVLAELVNGEGPLPFRQLRQSARNFTGTELEKELIVYRHIQHWMPEVDLLLSTLSLSQKNQQHLSEKVDYYGAKLKRQTIGNQRLYLLCYLQTRWQQALERIADGFVHHVRQTKQKAKEYAQEAVFKDWQNASKNVSKAAEVLHLFIDDSIDLQLPFATVRQQALSLLTKRDLESVCLFLNEQRRSVDEAMWQYYDEKESLRKGLLRELFLCLRFEGSDGTQHLATALAKAQGELNAQAQLQTADTRLLSKKALEFLLDGDGNILIDRYEWFLYQQIPDRLNGQLTLPEITKYRALDADLIDGEHWRKNKYTLLQQSQLTKLAKEPEKLVKQMAIELDTRLYEVGEYLEQEDNRNIILRNPQGKRYWRLPSASKHHLVNNPFFQQIPSTGVADVLRMVDRDTGFIDCFTHVLVSQSRSRSHEYDLLAILVGNATNQGIYGMAQISDRTYDQLSTIQANYLRLETLNAANDNINNATAKLPIFRYYNIQEDVIHASADGQKFEARRETFKTRYSSKYFGTQKGVSAMSLIANHAAINARVIGANEHESHYIFDLLMNNTSDIIPDVLSTDTHGVNHVNFALLDLFGYQFAPRYAQVGKVINDLFDVKEDKENRIQLRLKKPINTHRIAQHWDTIQRIAVSLKQRKTTQATLVRKLSGYKHNHPLLEALTEYNRLVKANYLLCYIDDASLRNYVQRALNRGEAYHQLRRAVSSVNGDQFRGSSDEEIQLWNECARLVTNAIVYFNSRILSQLLTSFEFQGDTKRIDIVKQASPVAWHNINLKGVYHFELSEKLPDLEELMRLEATDGGASRALCRFWTENP
SIO_010081: NLY38_RS25770
subclass of: SO_0000673
so part of: NLY38_RS25770
location: complement(56441..59482)
location: region:56441-59482:-1
so has part: feature:56441-59482:-1:exon

WP_254348561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56441-59482:-1:exon

NLY38_RS25775
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25775
old locus tag: NLY38_25775
so part of: sequence
location: complement(59508..60050)
location: region:59508-60050:-1
so has part: feature:59508-60050:-1:exon
subclass of: SO_0000010

position:59508:-1
position: 59508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60050:-1
position: 60050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59508-60050:-1:exon

NLY38_RS25775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25775
old locus tag: NLY38_25775
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGNRFRTVEQTVDSWAFWGGVGRVGGVVAGLLFWFGLIEVTPYSLFSGLLHSALPGQASGEPSALLELADRFLGGVFWFFAAILWLEYVRYRVGVLEAGSKEAYRLQQREAAQKAAMPAPVGALVSITPVKGGLLSSSETQIGVLGIFRPKTTKCSGGPAICGLQRGITFFEIPILALFE
SIO_010081: NLY38_RS25775
subclass of: SO_0000673
so part of: NLY38_RS25775
location: complement(59508..60050)
location: region:59508-60050:-1
so has part: feature:59508-60050:-1:exon

WP_254348563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59508-60050:-1:exon

NLY38_RS25780
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25780
old locus tag: NLY38_25780
so part of: sequence
location: complement(60127..60597)
location: region:60127-60597:-1
so has part: feature:60127-60597:-1:exon
subclass of: SO_0000010

position:60127:-1
position: 60127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60597:-1
position: 60597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60127-60597:-1:exon

NLY38_RS25780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25780
old locus tag: NLY38_25780
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTSAIVKLTTPGGFPLFYSGKAGNDWLCESEGEAFQYLGFEAAQRKADQLAKIYAGTGMTFTAIEARQVCSAAACLLRGSRWDLYLFQGEQIHAIPTERARLAGVRSSYFGNREHLRRLIQAGELAELEGFTEQGLQFLAGLACGIRGGALTFQAA
SIO_010081: NLY38_RS25780
subclass of: SO_0000673
so part of: NLY38_RS25780
location: complement(60127..60597)
location: region:60127-60597:-1
so has part: feature:60127-60597:-1:exon

WP_254348564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60127-60597:-1:exon

NLY38_RS25785
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25785
old locus tag: NLY38_25785
so part of: sequence
location: complement(60607..60921)
location: region:60607-60921:-1
so has part: feature:60607-60921:-1:exon
subclass of: SO_0000010

position:60607:-1
position: 60607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60921:-1
position: 60921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60607-60921:-1:exon

NLY38_RS25785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25785
old locus tag: NLY38_25785
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTKEIETRIIRQAAQSLIDAGYWLQAQDGEEAAGERTRSAAAILAECFATDITNVIVYESADAKRSKGWVQFVHGNGVDVVSDYTVNLEAEMAAASDLAERLG
SIO_010081: NLY38_RS25785
subclass of: SO_0000673
so part of: NLY38_RS25785
location: complement(60607..60921)
location: region:60607-60921:-1
so has part: feature:60607-60921:-1:exon

WP_254348567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60607-60921:-1:exon

NLY38_RS25790
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25790
old locus tag: NLY38_25790
so part of: sequence
location: complement(60933..61097)
location: region:60933-61097:-1
so has part: feature:60933-61097:-1:exon
subclass of: SO_0000010

position:60933:-1
position: 60933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61097:-1
position: 61097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60933-61097:-1:exon

NLY38_RS25790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25790
old locus tag: NLY38_25790
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPVRQIQAGLNTPLNKIGELPPELFLACLQSVPSRLQDGLVSKWSAQLRTKTKH
SIO_010081: NLY38_RS25790
subclass of: SO_0000673
so part of: NLY38_RS25790
location: complement(60933..61097)
location: region:60933-61097:-1
so has part: feature:60933-61097:-1:exon

WP_254348568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60933-61097:-1:exon

NLY38_RS25795
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25795
old locus tag: NLY38_25795
so part of: sequence
location: complement(61108..61524)
location: region:61108-61524:-1
so has part: feature:61108-61524:-1:exon
subclass of: SO_0000010

position:61108:-1
position: 61108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61524:-1
position: 61524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61108-61524:-1:exon

NLY38_RS25795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25795
old locus tag: NLY38_25795
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAAATKPATTAKRRARRAAAPKMSRDEIQAKALQNALAERSFANYETIIEEFSERGIPVEEIEPRVNVFTYHAWRALGRQVRRGESGVKIISMVPVRGRGEDGEPQADQGEGQPARMRPVSAVVFHISQTDPIEPAKA
SIO_010081: NLY38_RS25795
subclass of: SO_0000673
so part of: NLY38_RS25795
location: complement(61108..61524)
location: region:61108-61524:-1
so has part: feature:61108-61524:-1:exon

WP_254348570.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61108-61524:-1:exon

NLY38_RS25800
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25800
old locus tag: NLY38_25800
so part of: sequence
location: complement(62332..62622)
location: region:62332-62622:-1
so has part: feature:62332-62622:-1:exon
subclass of: SO_0000010

position:62332:-1
position: 62332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62622:-1
position: 62622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62332-62622:-1:exon

NLY38_RS25800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25800
old locus tag: NLY38_25800
inference: COORDINATES: protein motif:HMM:NF024949.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MPRKEPGDVATRIGQRLRAECVRLRLSTDDASAAAGCSRRTWQYFEAGQSLPDAEQLYQLALAGFDVLFVVTGRRPFRVLQVEEDGSAVLTPPVEQ
SIO_010081: NLY38_RS25800
subclass of: SO_0000673
so part of: NLY38_RS25800
location: complement(62332..62622)
location: region:62332-62622:-1
so has part: feature:62332-62622:-1:exon

WP_254348572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62332-62622:-1:exon

NLY38_RS25805
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25805
old locus tag: NLY38_25805
so part of: sequence
location: complement(62632..63654)
location: region:62632-63654:-1
so has part: feature:62632-63654:-1:exon
subclass of: SO_0000010

position:62632:-1
position: 62632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63654:-1
position: 63654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62632-63654:-1:exon

NLY38_RS25805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25805
old locus tag: NLY38_25805
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020750540.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding protein
translation: MNNDAVQIPADVRARIIEAAEALYEQTGRERLPTVDAVRRAARADMNAVSTVVREWKQQLSARPAPVEVSVPEAVRQASDEALVTVWAVACDLANASLRSAQASWDQEKGDMEAMRRELAQLYEEQERALEESRQAQAAAVQGREKAEQRADELARQLAEAREALARQTALTEQAEARAVEISQHAADLKSELAIAHEDAAAARGELSAARLAHLAELDQVKNVAAEQIERTNEQLATARGRLAEASEQLESRTQGLIELQQQLATATARLEAAEATHAEHKQTVARAASEQAQRFTALQAERDEAVRVSRQDSEERARLQGQVESLQGIVNRLTPNKKA
SIO_010081: NLY38_RS25805
subclass of: SO_0000673
so part of: NLY38_RS25805
location: complement(62632..63654)
location: region:62632-63654:-1
so has part: feature:62632-63654:-1:exon

WP_254348574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62632-63654:-1:exon

NLY38_RS25810
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25810
old locus tag: NLY38_25810
so part of: sequence
location: 64834..65553
location: region:64834-65553:1
so has part: feature:64834-65553:1:exon
subclass of: SO_0000010

position:64834:1
position: 64834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65553:1
position: 65553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64834-65553:1:exon

NLY38_RS25810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25810
old locus tag: NLY38_25810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004661680.1
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MTIEATAATELDRNRVYQSNKLIESSYTLTLNEKRVLLCAASLIDSRKPLPKDGVLRIYAETFATVFGMQTRHAYEPLKDAADRLYERDIRRCEQGKVVEKMRWVYHIKYREGEGCVELGFSPTVLPHLTKLNREFTSYQLRQIGGLNSFYAIRLYELMSQFYKIGSRECALDRLRELLDLGEKYPNVKDLQKYVLNPSLDEINAQTDLNVSMAAKRSGRRIIGFVFAIKKSDQLALSL
SIO_010081: NLY38_RS25810
subclass of: SO_0000673
so part of: NLY38_RS25810
location: 64834..65553
location: region:64834-65553:1
so has part: feature:64834-65553:1:exon

WP_254348576.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64834-65553:1:exon

NLY38_RS25815
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25815
old locus tag: NLY38_25815
so part of: sequence
location: 65814..67184
location: region:65814-67184:1
so has part: feature:65814-67184:1:exon
subclass of: SO_0000010

position:65814:1
position: 65814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67184:1
position: 67184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65814-67184:1:exon

NLY38_RS25815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25815
old locus tag: NLY38_25815
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011117183.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1182 family transposase
translation: MMGQLPGGQQRLFYSFNLEDHVPPQHLLRSIDQCLDLSDLRAHLADFYSPIGRPSIDPELMVRMLVVGYCYGIRSERRLCEEVHLNLAYRWFCRLGLEDEVPNHSTFSKNRHGRFRDSGLFRWLFNEVLRRCMAAGLVKGEGFAVDASIIKADASRQRGVAGDEVDWRDPALSSRAVREYLEALDEEALAEALPKKISLTDPQSRWTAAPGGPAYFAYSTNYLIDTEHGVIMDVEATPAHRTAEVDSTKTMVERVEAQFDLTPGRLIGDTAYGTAPMLAWMVEEKNIEPHVPVWDKTERKDDSLSSNDFHWNPEANEYRCPAGKPLRSEWRAFTQKRSRVTKANTIIYRSSQTDCATCPLKAKCCPNTPNRKIVRSIHEAARDVARRIAKTTEYLVSRCERKKVEMLFAHLKRIMKLDRLRLRGLTGATDEFTLAATVQNLRRMAKLLPQGPPFTG
SIO_010081: NLY38_RS25815
subclass of: SO_0000673
so part of: NLY38_RS25815
location: 65814..67184
location: region:65814-67184:1
so has part: feature:65814-67184:1:exon

WP_034077125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65814-67184:1:exon

NLY38_RS25820
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25820
old locus tag: NLY38_25820
so part of: sequence
location: complement(67556..67855)
location: region:67556-67855:-1
so has part: feature:67556-67855:-1:exon
subclass of: SO_0000010

position:67556:-1
position: 67556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67855:-1
position: 67855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67556-67855:-1:exon

NLY38_RS25820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25820
old locus tag: NLY38_25820
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNLGQLHQYLGELIAAGADPKLPIILPGQYEDQPQELIEALLVAGPYHADPAPKMVAYAERSGAALLMVGQGFDVDSVRDSHNPTWPPVEAPEPEPFSE
SIO_010081: NLY38_RS25820
subclass of: SO_0000673
so part of: NLY38_RS25820
location: complement(67556..67855)
location: region:67556-67855:-1
so has part: feature:67556-67855:-1:exon

WP_254348578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67556-67855:-1:exon

NLY38_RS25825
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25825
old locus tag: NLY38_25825
so part of: sequence
location: complement(68025..68381)
location: region:68025-68381:-1
so has part: feature:68025-68381:-1:exon
subclass of: SO_0000010

position:68025:-1
position: 68025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68381:-1
position: 68381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68025-68381:-1:exon

NLY38_RS25825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25825
old locus tag: NLY38_25825
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010895249.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrfB-related DNA-binding protein
translation: MPKKIDQGEQIQAERKQRGPDKAPRPKSRTLTAAEFEAVRPLLGISDERIEAARQAMVEGRKMAEIAEAFGWKSRQAVDRAVTNVWAEYQKYREGQEAAAQLLQQSKKKPAAKKTAGQ
SIO_010081: NLY38_RS25825
subclass of: SO_0000673
so part of: NLY38_RS25825
location: complement(68025..68381)
location: region:68025-68381:-1
so has part: feature:68025-68381:-1:exon

WP_254348580.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68025-68381:-1:exon

NLY38_RS25830
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25830
old locus tag: NLY38_25830
so part of: sequence
location: complement(68450..69739)
location: region:68450-69739:-1
so has part: feature:68450-69739:-1:exon
subclass of: SO_0000010

position:68450:-1
position: 68450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69739:-1
position: 69739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68450-69739:-1:exon

NLY38_RS25830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25830
old locus tag: NLY38_25830
inference: COORDINATES: protein motif:HMM:TIGR00180.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MSNAYSGMADMMNMGDLSSIVEGAGLGQPVFSRIDCAEIKIYAQQRDADEMENEEQKIEELAASIKKRGVLEPVIVCENEDGPEPWRLVCGERRLRSTILAELEQIPAMCYGKLTAEEIGEIQYAENVHRLNLSQLNEARVLKKDLDELDGDIEKLMEKHNKSRSWISKRLSLLELPPETVRLVKEGITADVEVINAVKQIEKRDPEQARETVQELKENAGKKGTNARDIAKKGKDKVKPPKPQAPKKAPANPENVATPRDESHKENGPVTDVPPATLANDPALQELQQTFAAGAQDDAGNELADALGAAGLDEQEQEQEPQRERNAPALPPVEVLDQAFSLVCHSGADPKMVLSQMAKDDRDGAEDWLHSFYEAGTSAPNLALAVIQGFRNGQFAQEGHGALALVAFLSGGEDGVLFNMLNILGTVKG
SIO_010081: NLY38_RS25830
subclass of: SO_0000673
so part of: NLY38_RS25830
location: complement(68450..69739)
location: region:68450-69739:-1
so has part: feature:68450-69739:-1:exon

WP_254348581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68450-69739:-1:exon

NLY38_RS25835
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25835
old locus tag: NLY38_25835
so part of: sequence
location: complement(69739..70515)
location: region:69739-70515:-1
so has part: feature:69739-70515:-1:exon
subclass of: SO_0000010

position:70515:-1
position: 70515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69739-70515:-1:exon

NLY38_RS25835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25835
old locus tag: NLY38_25835
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013006728.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MKILAVVNQKGGVGKSTLCTHLAHAAVEAGKRVLLVDLDPQGNLGVAFPATGAHEGEAHTSVALFSPDVELKPEILAPGLAIIRKDPALYNLAGTNKEGAKRPARNLQRLKQDYDLCIIDTPGMIGFNPPMTVAGLIAANAVVCPFQVGLFEAEPLANLWQYLRGIVTDGLNPRLKVLGLLPSKVNVKSSEELAALEELRRQFKSHILPHTLGERAAVKQAIARRKPVWRGVRGAGHKSAAEEWKAATQHILSSLGVL
SIO_010081: NLY38_RS25835
subclass of: SO_0000673
so part of: NLY38_RS25835
location: complement(69739..70515)
location: region:69739-70515:-1
so has part: feature:69739-70515:-1:exon

WP_254348582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69739-70515:-1:exon

NLY38_RS25840
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25840
old locus tag: NLY38_25840
so part of: sequence
location: complement(70624..71436)
location: region:70624-71436:-1
so has part: feature:70624-71436:-1:exon
subclass of: SO_0000010

position:70624:-1
position: 70624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71436:-1
position: 71436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70624-71436:-1:exon

NLY38_RS25840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25840
old locus tag: NLY38_25840
inference: COORDINATES: protein motif:HMM:NF023505.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3560 domain-containing protein
translation: MSNRYEERQESRRERLENAADKAARKSGQHFQAARAAVEAIPMGQPILVGHHSEARHRGALRRQDSHMRQAVDADRRAQELKRRADAVGTGGISSDDPEAVAKLREQLESAKASQDTMKKANAILRKKATNDEQKTRELEGLGFNSAMAANILSNGGFPRYSLTNNGANMRRIEQRIAELEALAARQDKEIQGPGYIYREDTEENRVMFIFPGKPDDETRAKMKMEGFKWSPSREGKPYVRKMTANALSVARWVREWLDRKAEKISHSTT
SIO_010081: NLY38_RS25840
subclass of: SO_0000673
so part of: NLY38_RS25840
location: complement(70624..71436)
location: region:70624-71436:-1
so has part: feature:70624-71436:-1:exon

WP_254348583.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70624-71436:-1:exon

NLY38_RS25845
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25845
old locus tag: NLY38_25845
so part of: sequence
location: complement(71621..71848)
location: region:71621-71848:-1
so has part: feature:71621-71848:-1:exon
subclass of: SO_0000010

position:71621:-1
position: 71621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71848:-1
position: 71848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71621-71848:-1:exon

NLY38_RS25845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25845
old locus tag: NLY38_25845
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020308962.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAQFFEYTAAELAAVPENPPALTLIELRALQLALDGDTFAPESFYAVGLASAVQKLDNALDELRARVEQERRARS
SIO_010081: NLY38_RS25845
subclass of: SO_0000673
so part of: NLY38_RS25845
location: complement(71621..71848)
location: region:71621-71848:-1
so has part: feature:71621-71848:-1:exon

WP_254348584.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71621-71848:-1:exon

NLY38_RS25850
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25850
old locus tag: NLY38_25850
so part of: sequence
location: complement(71861..72163)
location: region:71861-72163:-1
so has part: feature:71861-72163:-1:exon
subclass of: SO_0000010

position:71861:-1
position: 71861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72163:-1
position: 72163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71861-72163:-1:exon

NLY38_RS25850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25850
old locus tag: NLY38_25850
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNMHKLKTWLAVALIAAPGIAAAQDETGPEALAAFFMAQMYEVEAAEVEVTPISKEARAAVMQARAPGGHACRFEMAPAPASYEGKSRWLVGGLSCDQRI
SIO_010081: NLY38_RS25850
subclass of: SO_0000673
so part of: NLY38_RS25850
location: complement(71861..72163)
location: region:71861-72163:-1
so has part: feature:71861-72163:-1:exon

WP_254348585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71861-72163:-1:exon

NLY38_RS25855
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25855
old locus tag: NLY38_25855
so part of: sequence
location: complement(72170..72499)
location: region:72170-72499:-1
so has part: feature:72170-72499:-1:exon
subclass of: SO_0000010

position:72170:-1
position: 72170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72499:-1
position: 72499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72170-72499:-1:exon

NLY38_RS25855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25855
old locus tag: NLY38_25855
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTPAPAGGKFAGMILPGVTLALLISTGTNMHLANELREAHAIARDAQAAAQLGAKATSPAALPEQIEDATPQAPAVAPAEPPAERRSACTWPECDEPPADASPIPAQG
SIO_010081: NLY38_RS25855
subclass of: SO_0000673
so part of: NLY38_RS25855
location: complement(72170..72499)
location: region:72170-72499:-1
so has part: feature:72170-72499:-1:exon

WP_254348587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72170-72499:-1:exon

NLY38_RS25860
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25860
old locus tag: NLY38_25860
so part of: sequence
location: complement(72511..73017)
location: region:72511-73017:-1
so has part: feature:72511-73017:-1:exon
subclass of: SO_0000010

position:72511:-1
position: 72511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73017:-1
position: 73017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72511-73017:-1:exon

NLY38_RS25860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25860
old locus tag: NLY38_25860
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSQYWEGIEYKRWVVAVEAGPYKRKKPAFSTTIHVRARTRDEAVTVARQQLWQKVRRPTFAARLAHPVKDLGMTPAPADFAPEGPAAPLSAQMQDSYGQWCIVCKCGHKADVDDFCRTPRGAELPRAEYQCPKCFRAWAIKTVREGWQSPDGQYLPAQLACVAILPRL
SIO_010081: NLY38_RS25860
subclass of: SO_0000673
so part of: NLY38_RS25860
location: complement(72511..73017)
location: region:72511-73017:-1
so has part: feature:72511-73017:-1:exon

WP_254348588.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72511-73017:-1:exon

NLY38_RS25865
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25865
old locus tag: NLY38_25865
so part of: sequence
location: 73860..74225
location: region:73860-74225:1
so has part: feature:73860-74225:1:exon
subclass of: SO_0000010

position:73860:1
position: 73860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74225:1
position: 74225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73860-74225:1:exon

NLY38_RS25865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25865
old locus tag: NLY38_25865
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNSSTITLVEHFKGVVTFHFSNNTNHAQFAGQPSVYECRGAAVACEPCAISDALRDGHSRAIAEFVQSLNAGLCEDIGSLDGLPVYYVSGDSYYFWSSALDLSQGDVTTITMQLPERRYNS
SIO_010081: NLY38_RS25865
subclass of: SO_0000673
so part of: NLY38_RS25865
location: 73860..74225
location: region:73860-74225:1
so has part: feature:73860-74225:1:exon

WP_254348589.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73860-74225:1:exon

NLY38_RS25870
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
gene: topA
locus tag: NLY38_RS25870
old locus tag: NLY38_25870
so part of: sequence
location: 74239..76266
location: region:74239-76266:1
so has part: feature:74239-76266:1:exon
subclass of: SO_0000010

position:74239:1
position: 74239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76266:1
position: 76266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74239-76266:1:exon

NLY38_RS25870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
gene: topA
locus tag: NLY38_RS25870
old locus tag: NLY38_25870
EC number: 5.6.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009106276.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I DNA topoisomerase
translation: MKLMIVESPNKTKKITEILAHIRPGENWKVAASVGHIRDLPATGETEGEITTGVRADLMPRYELTDKGKDVVSRLKALAEKADEIYLATDPDREGESISWHLQQALKLKNPIRVSFNEITEGRIRSAIENPTRIDMKLVGAQEARRVLDRLVGYLVSPALYKLTGDRLSAGRVQSPAVYLVVVREREIAAFKVTVHYGAQLIFADAKTGGQWAVEWMTAEGFTSDDNPYFMDGRYAGLVAGVRDVSVLSCEEKDASRNPPGPFTTSTLQQAASNALKWNPKKTMDLAQELFAQGHISYHRTDNPNVADESMPDIRAVAAALGLEVVDKRREFKAGEGAQAGHPGITPTHWEVEVAGETPDQQTLYKLIRTRAIASQLLAARYKDRTVIMRATEPVEGKPVTFGAVGRTLVSPGWLKLLGKDAAEDDDEDAEPNNPIPLLTPGQTLKALDGKVLEKKTRPPKRYTEASLVKALEVKGIGRPSTSASIMNNIIEIRGYVEVDSKRQLRPTPLGEKLIACLEGKFSFLDLGFTRELETDLDKIAEGKAQYRGVVERLHASLGSELGQLSSMPSMRKEHPCPDCGKPMHRRKGSNGHFWGCTGYPDCNTTLPDEKGEPGKPKVVALSNYPCGKCGKPLVHKQKKGKGGYDFWGCSGFKEGCRASYPNLKGNKPDMANGK
SIO_010081: NLY38_RS25870
subclass of: SO_0000673
so part of: NLY38_RS25870
location: 74239..76266
location: region:74239-76266:1
so has part: feature:74239-76266:1:exon

WP_254348590.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74239-76266:1:exon

NLY38_RS25875
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25875
old locus tag: NLY38_25875
so part of: sequence
location: complement(76545..76784)
location: region:76545-76784:-1
so has part: feature:76545-76784:-1:exon
subclass of: SO_0000010

position:76545:-1
position: 76545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76784:-1
position: 76784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76545-76784:-1:exon

NLY38_RS25875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25875
old locus tag: NLY38_25875
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MTKGAKKIANAEQLIELRTEIGHTQGQAADFLYVSLSTYQNWEYKVSRCPFAFFELYELKAISLGLLKRRPGAAPRAGG
SIO_010081: NLY38_RS25875
subclass of: SO_0000673
so part of: NLY38_RS25875
location: complement(76545..76784)
location: region:76545-76784:-1
so has part: feature:76545-76784:-1:exon

WP_254348591.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76545-76784:-1:exon

NLY38_RS25880
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25880
old locus tag: NLY38_25880
so part of: sequence
location: 76894..77556
location: region:76894-77556:1
so has part: feature:76894-77556:1:exon
subclass of: SO_0000010

position:76894:1
position: 76894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77556:1
position: 77556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76894-77556:1:exon

NLY38_RS25880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25880
old locus tag: NLY38_25880
inference: COORDINATES: protein motif:HMM:NF013618.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase domain-containing protein
translation: MLLKATLLSLAQQCAPNVAPHTLDTLVLSESSGNPYAIGVVGMELLEQPKTKEEAIATAEGLLKEGALISAGLGQIYVKNWERLGLTVETVFEPCPNLKATSEILTGCYERATGEMGEGQKALQAAFSCYYSNNFSRGFVKEAGDRPSYLMNIAQNSEKLRGVPEIEFKPSDIKEVQPEQKETTSPQAPQQALEEFKEVKTESESKPDDSMSWDVLGDFH
SIO_010081: NLY38_RS25880
subclass of: SO_0000673
so part of: NLY38_RS25880
location: 76894..77556
location: region:76894-77556:1
so has part: feature:76894-77556:1:exon

WP_254348592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76894-77556:1:exon

NLY38_RS25885
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25885
old locus tag: NLY38_25885
so part of: sequence
location: 77580..77894
location: region:77580-77894:1
so has part: feature:77580-77894:1:exon
subclass of: SO_0000010

position:77580:1
position: 77580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77894:1
position: 77894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77580-77894:1:exon

NLY38_RS25885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25885
old locus tag: NLY38_25885
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005430728.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKQQLQAKQQNNVARYILAFLAMFTYQFALAAGGLDEATNQANEIKTWAYGFLGVGVFIYLIYLVVMALLDRKQWADVLVGVGYVAIAGAIIVVGEWAWSIWGS
SIO_010081: NLY38_RS25885
subclass of: SO_0000673
so part of: NLY38_RS25885
location: 77580..77894
location: region:77580-77894:1
so has part: feature:77580-77894:1:exon

WP_254348593.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77580-77894:1:exon

NLY38_RS25890
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25890
old locus tag: NLY38_25890
so part of: sequence
location: 77897..78265
location: region:77897-78265:1
so has part: feature:77897-78265:1:exon
subclass of: SO_0000010

position:77897:1
position: 77897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78265:1
position: 78265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77897-78265:1:exon

NLY38_RS25890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25890
old locus tag: NLY38_25890
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSEGKEEPVFASYKGLGYVSMFMGVPLTPLLIISGAALFGAFVIGFFFGWPALIWVMFCGLLVFSLKILCETDNKAMERFEWSVRAIRLRFTKASVILTVSPNKTGSKYERVFSRLKKIHRA
SIO_010081: NLY38_RS25890
subclass of: SO_0000673
so part of: NLY38_RS25890
location: 77897..78265
location: region:77897-78265:1
so has part: feature:77897-78265:1:exon

WP_254348596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77897-78265:1:exon

NLY38_RS25895
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25895
old locus tag: NLY38_25895
so part of: sequence
location: 78222..80609
location: region:78222-80609:1
so has part: feature:78222-80609:1:exon
subclass of: SO_0000010

position:78222:1
position: 78222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80609:1
position: 80609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78222-80609:1:exon

NLY38_RS25895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25895
old locus tag: NLY38_25895
inference: COORDINATES: protein motif:HMM:NF015118.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVFSAALKKFIAPDELLPAYHRHVDERIISMDNERLLGVIVLQGVPFETTTTQQLEQAFNSLTRVFSEINKINAPRLAQWCHIIKQRVSLDFDYKFENAFVADFSKKYLEQFKSGKFFRTTYAITFVYKYDDDIERGIEAVNNLLNFALKALRRYDPVALGVEINAHGVAHSEIGRFLGRLLNHTEDLYPLSGDALCERLQTSELNFGFDLCEIRPASGGKKYATYFDLRDYPEDSKRAMWNTLLSEPYEFVMTQSFLHFTQTKSLGMVNKKINEISSGTNFPEHYVEDLTQARGYVSSGEINFGEYHGALVVYGDTPTEAVDNGDSLTTNVLASSSARFLRSTSSGIFTYYSMMPGSKFKPMAEPKTTRNLACGYSLNNYPTGKQYGNPIGDGTAVIPLKTKSDSIYFFNTHFSNIDQDVRGQKYAGHCMILGATGAGKTTFEGVVVGFLTRFKPKMFAIDFNRSMQLFLETYGAVYFDIEDGVDTGINPFQLEDSPSLRSFLYALVGACGRNTDGTLSASDEQKIKGAVDIIMGMEWEDRRFSYISQLIPVEEGNSLGARLAKWQYSCNGTLAWALDSPTNRFNPATMDRIGFNTTSILKPGHPATEPILSVLFHMKDMMQRDGSLFLTLVEEFWVPCNYPTTQEQIKGTLKAGRIKGEFMFLVSQSPEDAINCEIFPAIVQQTPTKVFLPNPEATFEKYQLCGLNRKEFDDLHALEKDSRTFLVKQSHQSTFAKLDLSDFEDYLPIISGTWESIQMSHEVRAEVGDDPKDWVPVFRERLKEVNKTRKGGVA
SIO_010081: NLY38_RS25895
subclass of: SO_0000673
so part of: NLY38_RS25895
location: 78222..80609
location: region:78222-80609:1
so has part: feature:78222-80609:1:exon

WP_254348598.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78222-80609:1:exon

NLY38_RS25900
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25900
old locus tag: NLY38_25900
so part of: sequence
location: 80683..81387
location: region:80683-81387:1
so has part: feature:80683-81387:1:exon
subclass of: SO_0000010

position:80683:1
position: 80683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81387:1
position: 81387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80683-81387:1:exon

NLY38_RS25900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25900
old locus tag: NLY38_25900
inference: COORDINATES: protein motif:HMM:NF019608.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MKNKIRSIALAIAVAAGTAGQTAHASGIPTVDMAAIAQAVMDAMQQAMEAADQLAAAQEQISELQRQYEQAQQQFDELKDMTTGNSRYGTKYWSEEMYDYIPTSPTQGSWEDIYADMNQSTLEQYRNKYGLISENPLQQEVYDTQLTNLRTLENAHRANNLRLENIKNLQALADSATTPQEKEDIQTRLIAEQAAINNESNRLAAVESLMARNDAMQRQQQNREFSDFMQNGTE
SIO_010081: NLY38_RS25900
subclass of: SO_0000673
so part of: NLY38_RS25900
location: 80683..81387
location: region:80683-81387:1
so has part: feature:80683-81387:1:exon

WP_254348600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80683-81387:1:exon

NLY38_RS25905
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25905
old locus tag: NLY38_25905
so part of: sequence
location: 81393..82370
location: region:81393-82370:1
so has part: feature:81393-82370:1:exon
subclass of: SO_0000010

position:81393:1
position: 81393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82370:1
position: 82370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81393-82370:1:exon

NLY38_RS25905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25905
old locus tag: NLY38_25905
inference: COORDINATES: protein motif:HMM:NF016491.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MANEFTLGSQIFDSIESALDNLFTVGLGAFADLIAPVIGAFVSMYFVIVALNWIWNGNTSDLPIGDLMKRMFYMALFTTFAFNAPFYKTAVVEPVGSIGAEIAEAFANTGSDSPQIIDQMGNQIFETITVIWEKSPDFSIMDMNIVPLLRVVGTIIIVAVLGSIFMAVSFLYLLIAKIMVSLVLLLGPLYISFAFFPVTREYFMKWVSQLLNYTLLYALFGIAFTMLTNLLQTYVSGNSFDNILISDLTQLKLIFCYLLFTGVMVAIPMLSSQLTGGVGINGLGAFGPLMNVATKGVSKLVGGAAKGLGGGGNLIAGAGRNRRLG
SIO_010081: NLY38_RS25905
subclass of: SO_0000673
so part of: NLY38_RS25905
location: 81393..82370
location: region:81393-82370:1
so has part: feature:81393-82370:1:exon

WP_254348602.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81393-82370:1:exon

NLY38_RS25910
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25910
old locus tag: NLY38_25910
so part of: sequence
location: 82414..82560
location: region:82414-82560:1
so has part: feature:82414-82560:1:exon
subclass of: SO_0000010

position:82414:1
position: 82414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82560:1
position: 82560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82414-82560:1:exon

NLY38_RS25910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25910
old locus tag: NLY38_25910
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKVLATVFLFALISGCSSNPPMPPEPEGPLIKVNINQPHETYQGDKK
SIO_010081: NLY38_RS25910
subclass of: SO_0000673
so part of: NLY38_RS25910
location: 82414..82560
location: region:82414-82560:1
so has part: feature:82414-82560:1:exon

WP_254348604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82414-82560:1:exon

NLY38_RS25915
type: Gene
subclass of: SO_0000704
RO_0002162: 2493633
locus tag: NLY38_RS25915
old locus tag: NLY38_25915
so part of: sequence
location: 82557..83330
location: region:82557-83330:1
so has part: feature:82557-83330:1:exon
subclass of: SO_0000010

position:82557:1
position: 82557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82557-83330:1:exon

NLY38_RS25915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2493633
locus tag: NLY38_RS25915
old locus tag: NLY38_25915
inference: COORDINATES: protein motif:HMM:NF016238.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MSELQEHFNKSKTLEVPSETGEAAERAMLRKEAQRMMLEAAKFEKSKADWRKNLMKASLVVAGISVVLNIVQGAAIAMLTPLKTVEPYLLYVDKSTGVAEVRQPLADARTTYGEETDKFFISEYITARESYDWGLAQRNYDTVKSFSELNRSTFNEYDTFIKSPKSPLAILADKARVVVEINSITLDEKTSTATVRFSKTIIGQDGKPSITIPQTYWVATMSYHYPNPKLKPSERRLNPLGMVVISYQLVQEQFGGK
SIO_010081: NLY38_RS25915
subclass of: SO_0000673
so part of: NLY38_RS25915
location: 82557..83330
location: region:82557-83330:1
so has part: feature:82557-83330:1:exon

WP_254348606.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82557-83330:1:exon