Strigops habroptila isolate Jane chromosome 22, bStrHab1.2.pri, whole genome shotgun sequence.
type: Entry
definition: Strigops habroptila isolate Jane chromosome 22, bStrHab1.2.pri, whole genome shotgun sequence.
sequence version: NC_044298.2
sequence date: 2020-03-26
sequence: sequence
division: CON
label: NC_044298.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA558775
dblink: SAMN09948751
keyword: WGS
keyword: RefSeq
source: Strigops habroptila (Kakapo)
organism: Strigops habroptila
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Psittaciformes; Psittacidae; Strigops.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM013784.2.\nOn Mar 26, 2020 this sequence version replaced NC_044298.1.\nAssembly name: bStrHab1.2.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/03/04. The original whole-genome shotgun project has the\naccession RXXE00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 08-NOV-2019\nAssembly Method :: FALCON v. 5.1.1; FALCON unzip v. 1.0.2;\n scaff10X v. git 4.28.2018; Bionano Solve\n DLS v. 3.2.1; Salsa2 HiC v. 2.0;\n smrtanalysis Arrow polishing & gap\n filling v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes v. 1.2.0;\n purge_haplotigs v. bit 7.10.2018; gEVAL\n manual curation v. 2019-11-08\nAssembly Name :: bStrHab1.2.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 76.1x\nSequencing Technology :: PacBio RSII; 10X Genomics linked reads;\n Bionano Genomics DLS; Arima Genomics HiC\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Strigops habroptila Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 2907026
topology: linear
so has quality: SO_0000987
location: 1..2907026
location: region:1-2907026:1
RO_0002162: 2489341

NC_044298
type: RefSeq
SIO_000068: refseq

PRJNA558775
type: BioProject
SIO_000068: bioproject

SAMN09948751
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2907026:1
position: 2907026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-2907026:1:source
so part of: sequence
organism: Strigops habroptila
mol type: genomic DNA
isolate: Jane
chromosome: 22
sex: female
tissue type: blood in lysis buffer or EtOH
country: New Zealand: Anchor Island
lat lon: 45.757406 S 166.504927 E
collection date: 2013-04-13
collected by: Tim Raemaekers, Daryl Eason, Andrew Digby of Department of Conservation, New Zealand

2489341
type: Taxonomy
SIO_000068: taxonomy

TARS2
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: TARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<7..4734)
location: region:7-4734:-1
so has part: feature:7-4734:-1:exon
subclass of: SO_0000010

115602583
type: Gene
SIO_000068: ncbigene

position:7:-1
position: 7
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:4734:-1
position: 4734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7-4734:-1:exon

TARS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: TARS2
product: threonyl-tRNA synthetase 2, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030473813.1
SIO_010081: TARS2
subclass of: SO_0000673
so part of: TARS2
location: complement(join(<7..104,574..674,756..833,1137..1274,1348..1510,1599..1765,2183..2281,2371..2514,2811..2889,2962..3023,3257..3374,3460..3581,3667..3790,4387..4580,4671..4734))
location: region:7-4734:-1
so has part: feature:4671-4734:-1:exon
so has part: feature:4387-4580:-1:exon
so has part: feature:3667-3790:-1:exon
so has part: feature:3460-3581:-1:exon
so has part: feature:3257-3374:-1:exon
so has part: feature:2962-3023:-1:exon
so has part: feature:2811-2889:-1:exon
so has part: feature:2371-2514:-1:exon
so has part: feature:2183-2281:-1:exon
so has part: feature:1599-1765:-1:exon
so has part: feature:1348-1510:-1:exon
so has part: feature:1137-1274:-1:exon
so has part: feature:756-833:-1:exon
so has part: feature:574-674:-1:exon
so has part: feature:7-104:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4671-4734:-1:exon

position:4671:-1
position: 4671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4387-4580:-1:exon

position:4387:-1
position: 4387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4580:-1
position: 4580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3667-3790:-1:exon

position:3667:-1
position: 3667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3790:-1
position: 3790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3460-3581:-1:exon

position:3460:-1
position: 3460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3581:-1
position: 3581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3257-3374:-1:exon

position:3257:-1
position: 3257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3374:-1
position: 3374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2962-3023:-1:exon

position:2962:-1
position: 2962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3023:-1
position: 3023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2811-2889:-1:exon

position:2811:-1
position: 2811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2889:-1
position: 2889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2371-2514:-1:exon

position:2371:-1
position: 2371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2514:-1
position: 2514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2183-2281:-1:exon

position:2183:-1
position: 2183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2281:-1
position: 2281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1599-1765:-1:exon

position:1599:-1
position: 1599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1765:-1
position: 1765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1348-1510:-1:exon

position:1348:-1
position: 1348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1510:-1
position: 1510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1137-1274:-1:exon

position:1137:-1
position: 1137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1274:-1
position: 1274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:756-833:-1:exon

position:756:-1
position: 756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833:-1
position: 833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:574-674:-1:exon

position:574:-1
position: 574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674:-1
position: 674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7-104:-1:exon

position:104:-1
position: 104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TARS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: TARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: threonine--tRNA ligase, mitochondrial
translation: MTPAPAAGRLLFAGASRRHRVSGPDPDRFRLFQRLRRDGSSGNSGGSSGGSPAPGAPIRIALPGGRLLPGRALQTTPFMVATQLGGDVAAAALVARVNGALQDLEQPLECDSDLELLDFSSPEGREAFWRSGACVLGAVLEQFYGATFCRACATEDGFHCDVHMGDRTVPRGDLQALEQACAAFARAGHRFERLEAPRQQLMELLKHNSFQLQQIEEVTSPTATVYRCGPLLQLCRGPLLRHTGLITALRVLSSSAALWHGAGSGSLQRVAAVAFPSIQDLSQWERAQDEAMQRDHRRIGREQELFFFHELSPGSCFFLPRGAHIYNALVEFIRSEYRARGFLEVVTPNVFHPRLWELSGHWQHYGPNMFSCAAGSETLSLKPMNCPAHCLMFAHRPRSWRELPLRLADFGVLHRNEPPGTLTGLTRVRRFQQDDAHIFCTMEQLEQEIGSCLDFVHKVYDVLGFTFRMALATRPQGFLGDPETWDRAEKILEQSLSTFGHPWELSPGDGAFYGPKIDIRIRDALGRQHQCGTIQLDFQMPERFGLEYTSAGGPRARPVLLHRAVLGSVERMVAVLAESCGG
SIO_010081: TARS2
subclass of: SO_0000673
so part of: TARS2
location: complement(join(<7..104,574..674,756..833,1137..1274,1348..1510,1599..1765,2183..2281,2371..2514,2811..2889,2962..3023,3257..3374,3460..3581,3667..3790,4387..4580,4671..4730))
location: region:7-4730:-1
so has part: feature:4671-4730:-1:exon
so has part: feature:4387-4580:-1:exon
so has part: feature:3667-3790:-1:exon
so has part: feature:3460-3581:-1:exon
so has part: feature:3257-3374:-1:exon
so has part: feature:2962-3023:-1:exon
so has part: feature:2811-2889:-1:exon
so has part: feature:2371-2514:-1:exon
so has part: feature:2183-2281:-1:exon
so has part: feature:1599-1765:-1:exon
so has part: feature:1348-1510:-1:exon
so has part: feature:1137-1274:-1:exon
so has part: feature:756-833:-1:exon
so has part: feature:574-674:-1:exon
so has part: feature:7-104:-1:exon

XP_030329673.1
type: Protein
SIO_000068: ncbiprotein

position:4730:-1
position: 4730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4671-4730:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4387-4580:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3667-3790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3460-3581:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3257-3374:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2962-3023:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2811-2889:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2371-2514:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2183-2281:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1599-1765:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1348-1510:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1137-1274:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:756-833:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:574-674:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7-104:-1:exon

RPRD2
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: RPRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5034..20665)
location: region:5034-20665:-1
so has part: feature:5034-20665:-1:exon
subclass of: SO_0000010

115602584
type: Gene
SIO_000068: ncbigene

position:5034:-1
position: 5034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20665:-1
position: 20665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5034-20665:-1:exon

RPRD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: RPRD2
product: regulation of nuclear pre-mRNA domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 70 long SRA reads, 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030473814.1
SIO_010081: RPRD2
subclass of: SO_0000673
so part of: RPRD2
location: complement(join(5034..8475,9423..9626,9813..10082,10647..10932,11487..11662,12501..12627,13159..13211,14332..14409,15379..15479,17171..17300,20091..20665))
location: region:5034-20665:-1
so has part: feature:20091-20665:-1:exon
so has part: feature:17171-17300:-1:exon
so has part: feature:15379-15479:-1:exon
so has part: feature:14332-14409:-1:exon
so has part: feature:13159-13211:-1:exon
so has part: feature:12501-12627:-1:exon
so has part: feature:11487-11662:-1:exon
so has part: feature:10647-10932:-1:exon
so has part: feature:9813-10082:-1:exon
so has part: feature:9423-9626:-1:exon
so has part: feature:5034-8475:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20091-20665:-1:exon

position:20091:-1
position: 20091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17171-17300:-1:exon

position:17171:-1
position: 17171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17300:-1
position: 17300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15379-15479:-1:exon

position:15379:-1
position: 15379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15479:-1
position: 15479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:14332-14409:-1:exon

position:14332:-1
position: 14332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14409:-1
position: 14409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13159-13211:-1:exon

position:13159:-1
position: 13159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13211:-1
position: 13211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12501-12627:-1:exon

position:12501:-1
position: 12501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12627:-1
position: 12627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11487-11662:-1:exon

position:11487:-1
position: 11487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11662:-1
position: 11662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10647-10932:-1:exon

position:10647:-1
position: 10647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10932:-1
position: 10932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9813-10082:-1:exon

position:9813:-1
position: 9813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10082:-1
position: 10082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9423-9626:-1:exon

position:9423:-1
position: 9423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9626:-1
position: 9626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5034-8475:-1:exon

position:8475:-1
position: 8475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPRD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: RPRD2
product: regulation of nuclear pre-mRNA domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 67 long SRA reads, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030473815.1
SIO_010081: RPRD2
subclass of: SO_0000673
so part of: RPRD2
location: complement(join(5034..8475,9423..9626,9813..10082,10647..10932,11487..11662,12501..12627,13159..13211,15379..15479,17171..17300,20091..20310))
location: region:5034-20310:-1
so has part: feature:20091-20310:-1:exon
so has part: feature:17171-17300:-1:exon
so has part: feature:15379-15479:-1:exon
so has part: feature:13159-13211:-1:exon
so has part: feature:12501-12627:-1:exon
so has part: feature:11487-11662:-1:exon
so has part: feature:10647-10932:-1:exon
so has part: feature:9813-10082:-1:exon
so has part: feature:9423-9626:-1:exon
so has part: feature:5034-8475:-1:exon

position:20310:-1
position: 20310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20091-20310:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17171-17300:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15379-15479:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13159-13211:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12501-12627:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11487-11662:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10647-10932:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9813-10082:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9423-9626:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5034-8475:-1:exon

RPRD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: RPRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulation of nuclear pre-mRNA domain-containing protein 2 isoform X2
translation: MAAGGGGGGRASSSSSSAAASSSSAGALEASLDRKLQAVTNTMESIQGLSSWCLENKRHHSTIVYHWMKWLRRSAFPHRLNLFYLANDVIQNCKRKNAIVFRDTFAEVLPEAASLVKDPSVSKSIERIFKIWEDRNVYPEETILALKEALTSTNPKAALKSKIVAEFRPQSLIDELLLYKRSEDQIELKEKQLSTMRVDVCSTETLKCLKDKTGGKKFSKEFEEASSKLEEFVNGLDKQVKNGPSLTEALENAGIFYEAQYKEVKVVANAYKTFANRVSNLKKKLDQLKATLPDPEESPVPSPSMDAPSPTGSESPFQGMGEEDNSHSPAVGSRKTVSPEPVTDNRDVEDMELSDVEDDTSKIIVEERKEKQTAPAPSKAESVPKAVPCTTAAASTSVTVTPPAQTPPTPPAPKAASAAPGPPAPALALPNLANVDLAKISSILSSLTSVMKNTGVSPASRPSPGTPTSPTALTSGLKTPVLGTPAAPSNPLANILSKVEITPESILSALSKTQTQAAPALQGLSSLLQSVAGSSVQSSEASSQSTAASPANTTVPCGKGRNVPPNTQSFISKSFGYSPNSSTAEVSSTSVNKAPVGHTTGLPSSSFKPPTNSLGFSSSHPTSPSSLLPTETSLAQPSEIPKAKLESEPPSPSLEMKIHNFLKGNPGFSGLNLNIPILSSLGSSMATESHAADFQRGPTSTSMDNVDGTPVRDERSGTPTQDEMMDKPTSSNVDTISLLSKIMSPGSSTPSSTRSPLQSRDDGYSQELSSSVHTYRPFGLGRESPAGLYKQPADSMEIPSSLMDSSQEKFYPDTSFQEDEDYRDFDYSGPPPSAMLNLEKKPTKSILKSSKLSEAAEYQPVLSSYGQRSQEFGVKSPFPQSMRSILEQSESCDPLAGSPGLYGSYSLRGNDSTSDGSPSPSKNDVFFTPDSNHNTLPKPVVHSGLAQKQFPDSPHSLPHRSLFSSQNTLSSVEKPLGSSISTTSTMEFKNMLKNASRKPSEEKHFGQIPKSSSGDSVSLAGDPKGKPQPQEEHYRIETRVSSSCLDLPDSTEEKGAPIETLGYHNASSRGMSGEPIQTVESIRVLGKGNRGHGREASRGWFEMSSGGSAFDNGPSGSSELPAIAAFPTPYKEHVAPPPPFPESVNNFRTNNFSPAFEHHMAPPPLAPPPLEHGTPFPREPVPPAAPAKDHGGLFPRDHPVPPRMPAVDHNNPFSKEPSAPLSLPPPVEHTGVPFPAPPPPPVPGDHPSVPFPTQPPASGEHGGVPFPAPPPMEHGPLHQGTLKEHFSVHAASREPGAQPQQRDHTPAPLARSREAVGMTPLSREPLGAARGLGPSSHRDTGGRGGVLVRTPRTEFRPREPFVSRDPFHSLKRPRPPFGRGGAPFFTPKRPFFPPRY
SIO_010081: RPRD2
subclass of: SO_0000673
so part of: RPRD2
location: complement(join(5852..8475,9423..9626,9813..10082,10647..10932,11487..11662,12501..12627,13159..13211,15379..15479,17171..17300,20091..20310))
location: region:5852-20310:-1
so has part: feature:20091-20310:-1:exon
so has part: feature:17171-17300:-1:exon
so has part: feature:15379-15479:-1:exon
so has part: feature:13159-13211:-1:exon
so has part: feature:12501-12627:-1:exon
so has part: feature:11487-11662:-1:exon
so has part: feature:10647-10932:-1:exon
so has part: feature:9813-10082:-1:exon
so has part: feature:9423-9626:-1:exon
so has part: feature:5852-8475:-1:exon

XP_030329675.1
type: Protein
SIO_000068: ncbiprotein

position:5852:-1
position: 5852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20091-20310:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17171-17300:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15379-15479:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13159-13211:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12501-12627:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11487-11662:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10647-10932:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9813-10082:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9423-9626:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5852-8475:-1:exon

RPRD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: RPRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulation of nuclear pre-mRNA domain-containing protein 2 isoform X1
translation: MAAGGGGGGRASSSSSSAAASSSSAGALEASLDRKLQAVTNTMESIQGLSSWCLENKRHHSTIVYHWMKWLRRSAFPHRLNLFYLANDVIQNCKRKNAIVFRDTFAEVLPEAASLVKDPSVSKSIERIFKIWEDRNVYPEETILALKEALSTTFKTQKQLKETLNKQPNKPWKKAQTSTNPKAALKSKIVAEFRPQSLIDELLLYKRSEDQIELKEKQLSTMRVDVCSTETLKCLKDKTGGKKFSKEFEEASSKLEEFVNGLDKQVKNGPSLTEALENAGIFYEAQYKEVKVVANAYKTFANRVSNLKKKLDQLKATLPDPEESPVPSPSMDAPSPTGSESPFQGMGEEDNSHSPAVGSRKTVSPEPVTDNRDVEDMELSDVEDDTSKIIVEERKEKQTAPAPSKAESVPKAVPCTTAAASTSVTVTPPAQTPPTPPAPKAASAAPGPPAPALALPNLANVDLAKISSILSSLTSVMKNTGVSPASRPSPGTPTSPTALTSGLKTPVLGTPAAPSNPLANILSKVEITPESILSALSKTQTQAAPALQGLSSLLQSVAGSSVQSSEASSQSTAASPANTTVPCGKGRNVPPNTQSFISKSFGYSPNSSTAEVSSTSVNKAPVGHTTGLPSSSFKPPTNSLGFSSSHPTSPSSLLPTETSLAQPSEIPKAKLESEPPSPSLEMKIHNFLKGNPGFSGLNLNIPILSSLGSSMATESHAADFQRGPTSTSMDNVDGTPVRDERSGTPTQDEMMDKPTSSNVDTISLLSKIMSPGSSTPSSTRSPLQSRDDGYSQELSSSVHTYRPFGLGRESPAGLYKQPADSMEIPSSLMDSSQEKFYPDTSFQEDEDYRDFDYSGPPPSAMLNLEKKPTKSILKSSKLSEAAEYQPVLSSYGQRSQEFGVKSPFPQSMRSILEQSESCDPLAGSPGLYGSYSLRGNDSTSDGSPSPSKNDVFFTPDSNHNTLPKPVVHSGLAQKQFPDSPHSLPHRSLFSSQNTLSSVEKPLGSSISTTSTMEFKNMLKNASRKPSEEKHFGQIPKSSSGDSVSLAGDPKGKPQPQEEHYRIETRVSSSCLDLPDSTEEKGAPIETLGYHNASSRGMSGEPIQTVESIRVLGKGNRGHGREASRGWFEMSSGGSAFDNGPSGSSELPAIAAFPTPYKEHVAPPPPFPESVNNFRTNNFSPAFEHHMAPPPLAPPPLEHGTPFPREPVPPAAPAKDHGGLFPRDHPVPPRMPAVDHNNPFSKEPSAPLSLPPPVEHTGVPFPAPPPPPVPGDHPSVPFPTQPPASGEHGGVPFPAPPPMEHGPLHQGTLKEHFSVHAASREPGAQPQQRDHTPAPLARSREAVGMTPLSREPLGAARGLGPSSHRDTGGRGGVLVRTPRTEFRPREPFVSRDPFHSLKRPRPPFGRGGAPFFTPKRPFFPPRY
SIO_010081: RPRD2
subclass of: SO_0000673
so part of: RPRD2
location: complement(join(5852..8475,9423..9626,9813..10082,10647..10932,11487..11662,12501..12627,13159..13211,14332..14409,15379..15479,17171..17300,20091..20310))
location: region:5852-20310:-1
so has part: feature:20091-20310:-1:exon
so has part: feature:17171-17300:-1:exon
so has part: feature:15379-15479:-1:exon
so has part: feature:14332-14409:-1:exon
so has part: feature:13159-13211:-1:exon
so has part: feature:12501-12627:-1:exon
so has part: feature:11487-11662:-1:exon
so has part: feature:10647-10932:-1:exon
so has part: feature:9813-10082:-1:exon
so has part: feature:9423-9626:-1:exon
so has part: feature:5852-8475:-1:exon

XP_030329674.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20091-20310:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17171-17300:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15379-15479:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14332-14409:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13159-13211:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12501-12627:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11487-11662:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10647-10932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9813-10082:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9423-9626:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5852-8475:-1:exon

PRPF3
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: PRPF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(21029..32557)
location: region:21029-32557:-1
so has part: feature:21029-32557:-1:exon
subclass of: SO_0000010

115602586
type: Gene
SIO_000068: ncbigene

position:21029:-1
position: 21029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32557:-1
position: 32557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21029-32557:-1:exon

PRPF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: PRPF3
product: pre-mRNA processing factor 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 205 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030473817.1
SIO_010081: PRPF3
subclass of: SO_0000673
so part of: PRPF3
location: complement(join(21029..21240,21584..21645,21749..21832,22675..22793,23217..23330,23703..23802,23890..24033,24660..24742,25249..25415,25611..25917,26424..26644,26748..26831,27208..27354,30691..30821,31309..31490,32487..32557))
location: region:21029-32557:-1
so has part: feature:32487-32557:-1:exon
so has part: feature:31309-31490:-1:exon
so has part: feature:30691-30821:-1:exon
so has part: feature:27208-27354:-1:exon
so has part: feature:26748-26831:-1:exon
so has part: feature:26424-26644:-1:exon
so has part: feature:25611-25917:-1:exon
so has part: feature:25249-25415:-1:exon
so has part: feature:24660-24742:-1:exon
so has part: feature:23890-24033:-1:exon
so has part: feature:23703-23802:-1:exon
so has part: feature:23217-23330:-1:exon
so has part: feature:22675-22793:-1:exon
so has part: feature:21749-21832:-1:exon
so has part: feature:21584-21645:-1:exon
so has part: feature:21029-21240:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32487-32557:-1:exon

position:32487:-1
position: 32487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:31309-31490:-1:exon

position:31309:-1
position: 31309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31490:-1
position: 31490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:30691-30821:-1:exon

position:30691:-1
position: 30691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30821:-1
position: 30821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:27208-27354:-1:exon

position:27208:-1
position: 27208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27354:-1
position: 27354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:26748-26831:-1:exon

position:26748:-1
position: 26748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26831:-1
position: 26831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:26424-26644:-1:exon

position:26424:-1
position: 26424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26644:-1
position: 26644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:25611-25917:-1:exon

position:25611:-1
position: 25611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25917:-1
position: 25917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:25249-25415:-1:exon

position:25249:-1
position: 25249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25415:-1
position: 25415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:24660-24742:-1:exon

position:24660:-1
position: 24660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24742:-1
position: 24742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:23890-24033:-1:exon

position:23890:-1
position: 23890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24033:-1
position: 24033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:23703-23802:-1:exon

position:23703:-1
position: 23703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23802:-1
position: 23802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:23217-23330:-1:exon

position:23217:-1
position: 23217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23330:-1
position: 23330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:22675-22793:-1:exon

position:22675:-1
position: 22675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22793:-1
position: 22793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:21749-21832:-1:exon

position:21749:-1
position: 21749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21832:-1
position: 21832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:21584-21645:-1:exon

position:21584:-1
position: 21584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21645:-1
position: 21645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:21029-21240:-1:exon

position:21240:-1
position: 21240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRPF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: PRPF3
product: pre-mRNA processing factor 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 127 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030473818.1
SIO_010081: PRPF3
subclass of: SO_0000673
so part of: PRPF3
location: complement(join(21029..21240,21584..21645,21749..21832,22675..22793,23217..23330,23703..23802,23890..24033,24660..24742,25249..25415,25611..25917,26424..26644,26748..26831,27208..27354,28420..28506,30691..30821,31309..31491))
location: region:21029-31491:-1
so has part: feature:31309-31491:-1:exon
so has part: feature:30691-30821:-1:exon
so has part: feature:28420-28506:-1:exon
so has part: feature:27208-27354:-1:exon
so has part: feature:26748-26831:-1:exon
so has part: feature:26424-26644:-1:exon
so has part: feature:25611-25917:-1:exon
so has part: feature:25249-25415:-1:exon
so has part: feature:24660-24742:-1:exon
so has part: feature:23890-24033:-1:exon
so has part: feature:23703-23802:-1:exon
so has part: feature:23217-23330:-1:exon
so has part: feature:22675-22793:-1:exon
so has part: feature:21749-21832:-1:exon
so has part: feature:21584-21645:-1:exon
so has part: feature:21029-21240:-1:exon

position:31491:-1
position: 31491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31309-31491:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:30691-30821:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28420-28506:-1:exon

position:28420:-1
position: 28420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28506:-1
position: 28506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:27208-27354:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26748-26831:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26424-26644:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:25611-25917:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:25249-25415:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:24660-24742:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:23890-24033:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:23703-23802:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:23217-23330:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:22675-22793:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:21749-21832:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:21584-21645:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:21029-21240:-1:exon

PRPF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: PRPF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
translation: MALSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTLRFVDKLFEAVEEGRSSRHSKSNSDRNRKRELKDVFGDDSEVSKESSGVKKRRIPRFEEVEDEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKISSSSQSERLPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANIRAVKREQFKQQLKEKPSEDMESNTYFDPRVSITPAQRQKRTFKFHEKGKFEKIAQRLRTKAQLEKLQAEISQAARKTGIHTSTKLALITPKKELKEGEIPEIEWWDSYIIPNGLDLKGGTSSKRDEYFGITNLVEHPAQLNPPVDSDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKAKKVKKLKEDVSQGVHIAVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLHRIKWDEQTANTKGEDDDESDEESVKKTNKCSLVWEGTAKDRSFGEMKFKQCPTENMAREHFKKHGAEHYWDLALSESVLESTD
SIO_010081: PRPF3
subclass of: SO_0000673
so part of: PRPF3
location: complement(join(21094..21240,21584..21645,21749..21832,22675..22793,23217..23330,23703..23802,23890..24033,24660..24742,25249..25415,25611..25917,26424..26644,26748..26831,27208..27354,30691..30821,31309..31453))
location: region:21094-31453:-1
so has part: feature:31309-31453:-1:exon
so has part: feature:30691-30821:-1:exon
so has part: feature:27208-27354:-1:exon
so has part: feature:26748-26831:-1:exon
so has part: feature:26424-26644:-1:exon
so has part: feature:25611-25917:-1:exon
so has part: feature:25249-25415:-1:exon
so has part: feature:24660-24742:-1:exon
so has part: feature:23890-24033:-1:exon
so has part: feature:23703-23802:-1:exon
so has part: feature:23217-23330:-1:exon
so has part: feature:22675-22793:-1:exon
so has part: feature:21749-21832:-1:exon
so has part: feature:21584-21645:-1:exon
so has part: feature:21094-21240:-1:exon

XP_030329677.1
type: Protein
SIO_000068: ncbiprotein

position:21094:-1
position: 21094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31453:-1
position: 31453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31309-31453:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:30691-30821:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27208-27354:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:26748-26831:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26424-26644:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:25611-25917:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:25249-25415:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:24660-24742:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:23890-24033:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:23703-23802:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:23217-23330:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:22675-22793:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:21749-21832:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:21584-21645:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:21094-21240:-1:exon

PRPF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: PRPF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U4/U6 small nuclear ribonucleoprotein Prp3 isoform X2
translation: MLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKISSSSQSERLPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANIRAVKREQFKQQLKEKPSEDMESNTYFDPRVSITPAQRQKRTFKFHEKGKFEKIAQRLRTKAQLEKLQAEISQAARKTGIHTSTKLALITPKKELKEGEIPEIEWWDSYIIPNGLDLKGGTSSKRDEYFGITNLVEHPAQLNPPVDSDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKAKKVKKLKEDVSQGVHIAVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLHRIKWDEQTANTKGEDDDESDEESVKKTNKCSLVWEGTAKDRSFGEMKFKQCPTENMAREHFKKHGAEHYWDLALSESVLESTD
SIO_010081: PRPF3
subclass of: SO_0000673
so part of: PRPF3
location: complement(join(21094..21240,21584..21645,21749..21832,22675..22793,23217..23330,23703..23802,23890..24033,24660..24742,25249..25415,25611..25917,26424..26644,26748..26831,27208..27225))
location: region:21094-27225:-1
so has part: feature:27208-27225:-1:exon
so has part: feature:26748-26831:-1:exon
so has part: feature:26424-26644:-1:exon
so has part: feature:25611-25917:-1:exon
so has part: feature:25249-25415:-1:exon
so has part: feature:24660-24742:-1:exon
so has part: feature:23890-24033:-1:exon
so has part: feature:23703-23802:-1:exon
so has part: feature:23217-23330:-1:exon
so has part: feature:22675-22793:-1:exon
so has part: feature:21749-21832:-1:exon
so has part: feature:21584-21645:-1:exon
so has part: feature:21094-21240:-1:exon

XP_030329678.1
type: Protein
SIO_000068: ncbiprotein

position:27225:-1
position: 27225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27208-27225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26748-26831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:26424-26644:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:25611-25917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:25249-25415:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:24660-24742:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:23890-24033:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:23703-23802:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:23217-23330:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:22675-22793:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:21749-21832:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:21584-21645:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:21094-21240:-1:exon

MRPS21
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: MRPS21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(32941..36547)
location: region:32941-36547:-1
so has part: feature:32941-36547:-1:exon
subclass of: SO_0000010

115602590
type: Gene
SIO_000068: ncbigene

position:32941:-1
position: 32941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36547:-1
position: 36547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32941-36547:-1:exon

MRPS21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: MRPS21
product: mitochondrial ribosomal protein S21, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 70 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030473829.1
SIO_010081: MRPS21
subclass of: SO_0000673
so part of: MRPS21
location: complement(join(32941..33152,33746..33835,35074..35149,35314..35591,35940..36059))
location: region:32941-36059:-1
so has part: feature:35940-36059:-1:exon
so has part: feature:35314-35591:-1:exon
so has part: feature:35074-35149:-1:exon
so has part: feature:33746-33835:-1:exon
so has part: feature:32941-33152:-1:exon

position:36059:-1
position: 36059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35940-36059:-1:exon

position:35940:-1
position: 35940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:35314-35591:-1:exon

position:35314:-1
position: 35314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35591:-1
position: 35591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:35074-35149:-1:exon

position:35074:-1
position: 35074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35149:-1
position: 35149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:33746-33835:-1:exon

position:33746:-1
position: 33746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33835:-1
position: 33835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:32941-33152:-1:exon

position:33152:-1
position: 33152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MRPS21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: MRPS21
product: mitochondrial ribosomal protein S21, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030473827.1
SIO_010081: MRPS21
subclass of: SO_0000673
so part of: MRPS21
location: complement(join(32941..33152,33746..33838,35074..35149,35314..35591,35940..36059))
location: region:32941-36059:-1
so has part: feature:35940-36059:-1:exon
so has part: feature:35314-35591:-1:exon
so has part: feature:35074-35149:-1:exon
so has part: feature:33746-33838:-1:exon
so has part: feature:32941-33152:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35940-36059:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35314-35591:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:35074-35149:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:33746-33838:-1:exon

position:33838:-1
position: 33838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:32941-33152:-1:exon

MRPS21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: MRPS21
product: mitochondrial ribosomal protein S21, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 74 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030473830.1
SIO_010081: MRPS21
subclass of: SO_0000673
so part of: MRPS21
location: complement(join(32941..33152,33746..33838,34637..34682,34793..34871,35074..35149,35314..35591,35940..36059))
location: region:32941-36059:-1
so has part: feature:35940-36059:-1:exon
so has part: feature:35314-35591:-1:exon
so has part: feature:35074-35149:-1:exon
so has part: feature:34793-34871:-1:exon
so has part: feature:34637-34682:-1:exon
so has part: feature:33746-33838:-1:exon
so has part: feature:32941-33152:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35940-36059:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35314-35591:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:35074-35149:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:34793-34871:-1:exon

position:34793:-1
position: 34793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34871:-1
position: 34871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:34637-34682:-1:exon

position:34637:-1
position: 34637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34682:-1
position: 34682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:33746-33838:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32941-33152:-1:exon

MRPS21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: MRPS21
product: mitochondrial ribosomal protein S21, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 70 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030473836.2
SIO_010081: MRPS21
subclass of: SO_0000673
so part of: MRPS21
location: complement(join(32941..33152,33746..33835,33959..34320))
location: region:32941-34320:-1
so has part: feature:33959-34320:-1:exon
so has part: feature:33746-33835:-1:exon
so has part: feature:32941-33152:-1:exon

position:34320:-1
position: 34320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33959-34320:-1:exon

position:33959:-1
position: 33959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:33746-33835:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32941-33152:-1:exon

MRPS21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: MRPS21
product: mitochondrial ribosomal protein S21, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030473835.1
SIO_010081: MRPS21
subclass of: SO_0000673
so part of: MRPS21
location: complement(join(32941..33152,33746..33838,33959..34320))
location: region:32941-34320:-1
so has part: feature:33959-34320:-1:exon
so has part: feature:33746-33838:-1:exon
so has part: feature:32941-33152:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33959-34320:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33746-33838:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32941-33152:-1:exon

MRPS21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: MRPS21
product: mitochondrial ribosomal protein S21, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 71 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030473834.1
SIO_010081: MRPS21
subclass of: SO_0000673
so part of: MRPS21
location: complement(join(32941..33152,33746..33838,34024..34319))
location: region:32941-34319:-1
so has part: feature:34024-34319:-1:exon
so has part: feature:33746-33838:-1:exon
so has part: feature:32941-33152:-1:exon

position:34319:-1
position: 34319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34024-34319:-1:exon

position:34024:-1
position: 34024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:33746-33838:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32941-33152:-1:exon

MRPS21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: MRPS21
product: mitochondrial ribosomal protein S21, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 70 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030473833.1
SIO_010081: MRPS21
subclass of: SO_0000673
so part of: MRPS21
location: complement(join(32941..33152,33746..33835,34024..34318))
location: region:32941-34318:-1
so has part: feature:34024-34318:-1:exon
so has part: feature:33746-33835:-1:exon
so has part: feature:32941-33152:-1:exon

position:34318:-1
position: 34318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34024-34318:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33746-33835:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32941-33152:-1:exon

MRPS21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: MRPS21
product: mitochondrial ribosomal protein S21, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 109 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030473831.1
SIO_010081: MRPS21
subclass of: SO_0000673
so part of: MRPS21
location: complement(join(32941..33152,33746..33865,34024..34318))
location: region:32941-34318:-1
so has part: feature:34024-34318:-1:exon
so has part: feature:33746-33865:-1:exon
so has part: feature:32941-33152:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34024-34318:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33746-33865:-1:exon

position:33865:-1
position: 33865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:32941-33152:-1:exon

MRPS21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: MRPS21
product: mitochondrial ribosomal protein S21, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 105 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030473832.1
SIO_010081: MRPS21
subclass of: SO_0000673
so part of: MRPS21
location: complement(join(32941..33152,33746..33865,33959..34318))
location: region:32941-34318:-1
so has part: feature:33959-34318:-1:exon
so has part: feature:33746-33865:-1:exon
so has part: feature:32941-33152:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33959-34318:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33746-33865:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32941-33152:-1:exon

MRPS21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: MRPS21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S21, mitochondrial isoform X2
translation: MPGAGGLHPAPGGAARGAQAGTVRQSAAMANHLRFWGRTVMVQNGNVEAAYGVLNRILTQDGLVDTVRRGRYYEKPCRRRQRLAYEACRRVYNAEMGRKISFLARSNRQDPWPGC
SIO_010081: MRPS21
subclass of: SO_0000673
so part of: MRPS21
location: complement(join(32972..33152,33746..33835,35074..35149,35314))
location: region:32972-35314:-1
so has part: feature:35314-35314:-1:exon
so has part: feature:35074-35149:-1:exon
so has part: feature:33746-33835:-1:exon
so has part: feature:32972-33152:-1:exon

XP_030329689.1
type: Protein
SIO_000068: ncbiprotein

position:32972:-1
position: 32972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35314-35314:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35074-35149:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:33746-33835:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:32972-33152:-1:exon

MRPS21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: MRPS21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S21, mitochondrial isoform X1
translation: MPGAGGLHPAPGGAARGAQAGTVRQSSAAMANHLRFWGRTVMVQNGNVEAAYGVLNRILTQDGLVDTVRRGRYYEKPCRRRQRLAYEACRRVYNAEMGRKISFLARSNRQDPWPGC
SIO_010081: MRPS21
subclass of: SO_0000673
so part of: MRPS21
location: complement(join(32972..33152,33746..33838,35074..35149,35314))
location: region:32972-35314:-1
so has part: feature:35314-35314:-1:exon
so has part: feature:35074-35149:-1:exon
so has part: feature:33746-33838:-1:exon
so has part: feature:32972-33152:-1:exon

XP_030329687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35314-35314:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35074-35149:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:33746-33838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:32972-33152:-1:exon

MRPS21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: MRPS21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S21, mitochondrial isoform X3
translation: MANHLRFWGRTVMVQNGNVEAAYGVLNRILTQDGLVDTVRRGRYYEKPCRRRQRLAYEACRRVYNAEMGRKISFLARSNRQDPWPGC
SIO_010081: MRPS21
subclass of: SO_0000673
so part of: MRPS21
location: complement(join(32972..33152,33746..33828))
location: region:32972-33828:-1
so has part: feature:33746-33828:-1:exon
so has part: feature:32972-33152:-1:exon

XP_030329690.1
type: Protein
SIO_000068: ncbiprotein

position:33828:-1
position: 33828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33746-33828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32972-33152:-1:exon

MRPS21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: MRPS21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S21, mitochondrial isoform X3
translation: MANHLRFWGRTVMVQNGNVEAAYGVLNRILTQDGLVDTVRRGRYYEKPCRRRQRLAYEACRRVYNAEMGRKISFLARSNRQDPWPGC
SIO_010081: MRPS21
subclass of: SO_0000673
so part of: MRPS21
location: complement(join(32972..33152,33746..33828))
location: region:32972-33828:-1
so has part: feature:33746-33828:-1:exon
so has part: feature:32972-33152:-1:exon

XP_030329691.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33746-33828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32972-33152:-1:exon

MRPS21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: MRPS21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S21, mitochondrial isoform X3
translation: MANHLRFWGRTVMVQNGNVEAAYGVLNRILTQDGLVDTVRRGRYYEKPCRRRQRLAYEACRRVYNAEMGRKISFLARSNRQDPWPGC
SIO_010081: MRPS21
subclass of: SO_0000673
so part of: MRPS21
location: complement(join(32972..33152,33746..33828))
location: region:32972-33828:-1
so has part: feature:33746-33828:-1:exon
so has part: feature:32972-33152:-1:exon

XP_030329692.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33746-33828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32972-33152:-1:exon

MRPS21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: MRPS21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S21, mitochondrial isoform X3
translation: MANHLRFWGRTVMVQNGNVEAAYGVLNRILTQDGLVDTVRRGRYYEKPCRRRQRLAYEACRRVYNAEMGRKISFLARSNRQDPWPGC
SIO_010081: MRPS21
subclass of: SO_0000673
so part of: MRPS21
location: complement(join(32972..33152,33746..33828))
location: region:32972-33828:-1
so has part: feature:33746-33828:-1:exon
so has part: feature:32972-33152:-1:exon

XP_030329693.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33746-33828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32972-33152:-1:exon

MRPS21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: MRPS21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S21, mitochondrial isoform X3
translation: MANHLRFWGRTVMVQNGNVEAAYGVLNRILTQDGLVDTVRRGRYYEKPCRRRQRLAYEACRRVYNAEMGRKISFLARSNRQDPWPGC
SIO_010081: MRPS21
subclass of: SO_0000673
so part of: MRPS21
location: complement(join(32972..33152,33746..33828))
location: region:32972-33828:-1
so has part: feature:33746-33828:-1:exon
so has part: feature:32972-33152:-1:exon

XP_030329694.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33746-33828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32972-33152:-1:exon

MRPS21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: MRPS21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S21, mitochondrial isoform X3
translation: MANHLRFWGRTVMVQNGNVEAAYGVLNRILTQDGLVDTVRRGRYYEKPCRRRQRLAYEACRRVYNAEMGRKISFLARSNRQDPWPGC
SIO_010081: MRPS21
subclass of: SO_0000673
so part of: MRPS21
location: complement(join(32972..33152,33746..33828))
location: region:32972-33828:-1
so has part: feature:33746-33828:-1:exon
so has part: feature:32972-33152:-1:exon

XP_030329695.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33746-33828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32972-33152:-1:exon

MRPS21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: MRPS21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S21, mitochondrial isoform X3
translation: MANHLRFWGRTVMVQNGNVEAAYGVLNRILTQDGLVDTVRRGRYYEKPCRRRQRLAYEACRRVYNAEMGRKISFLARSNRQDPWPGC
SIO_010081: MRPS21
subclass of: SO_0000673
so part of: MRPS21
location: complement(join(32972..33152,33746..33828))
location: region:32972-33828:-1
so has part: feature:33746-33828:-1:exon
so has part: feature:32972-33152:-1:exon

XP_030329696.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33746-33828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32972-33152:-1:exon

MRPS21
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2489341
gene: MRPS21
product: mitochondrial ribosomal protein S21, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003989685.1
SIO_010081: MRPS21
so part of: MRPS21
location: complement(join(34631..34682,34793..34871,35074..35149,35314..35591,35940..36547))
location: region:34631-36547:-1
so has part: feature:35940-36547:-1:exon
so has part: feature:35314-35591:-1:exon
so has part: feature:35074-35149:-1:exon
so has part: feature:34793-34871:-1:exon
so has part: feature:34631-34682:-1:exon

position:34631:-1
position: 34631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35940-36547:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35314-35591:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:35074-35149:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:34793-34871:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:34631-34682:-1:exon

CA14
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: CA14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 36872..40193
location: region:36872-40193:1
so has part: feature:36872-40193:1:exon
subclass of: SO_0000010

115602801
type: Gene
SIO_000068: ncbigene

position:36872:1
position: 36872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40193:1
position: 40193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36872-40193:1:exon

CA14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: CA14
product: carbonic anhydrase 14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 7 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030474220.1
SIO_010081: CA14
subclass of: SO_0000673
so part of: CA14
location: join(36872..36926,37063..37083,37596..37922,38004..38146,38912..39007,39078..39144,39245..39402,39485..39611,39745..39765,39855..39939,40037..40193)
location: region:36872-40193:1
so has part: feature:36872-36926:1:exon
so has part: feature:37063-37083:1:exon
so has part: feature:37596-37922:1:exon
so has part: feature:38004-38146:1:exon
so has part: feature:38912-39007:1:exon
so has part: feature:39078-39144:1:exon
so has part: feature:39245-39402:1:exon
so has part: feature:39485-39611:1:exon
so has part: feature:39745-39765:1:exon
so has part: feature:39855-39939:1:exon
so has part: feature:40037-40193:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36872-36926:1:exon

position:36926:1
position: 36926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:37063-37083:1:exon

position:37063:1
position: 37063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37083:1
position: 37083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:37596-37922:1:exon

position:37596:1
position: 37596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37922:1
position: 37922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:38004-38146:1:exon

position:38004:1
position: 38004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38146:1
position: 38146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:38912-39007:1:exon

position:38912:1
position: 38912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39007:1
position: 39007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:39078-39144:1:exon

position:39078:1
position: 39078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39144:1
position: 39144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:39245-39402:1:exon

position:39245:1
position: 39245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39402:1
position: 39402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:39485-39611:1:exon

position:39485:1
position: 39485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39611:1
position: 39611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:39745-39765:1:exon

position:39745:1
position: 39745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39765:1
position: 39765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:39855-39939:1:exon

position:39855:1
position: 39855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39939:1
position: 39939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:40037-40193:1:exon

position:40037:1
position: 40037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CA14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: CA14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbonic anhydrase 14
translation: MLPVLLLLLAGLAPTLPAGPHWAYEARWECPRPGAGTACPPVGRNEGVRGHGLGESGIPDVRRIPPDTGTPPSPGPHGQQHWPEGHPACGGRAQSPIDIRTQRVQPDPSLPPIRPVGYERPGPALLTLSNNGHTAVLELPPSLRLRGLPRSFAAAQLHFHWGRAGRRGGAEHLLDGHRAPAEMHVVHYDAEHYGNASDAQHHGGGLAVLGVLLEVGADPHPAYDNILRHLGSIRYAGQATAIPSFSIQDLLPSRLDLYYRYNGSLTTPPCFQSVLWTLFQQPVHISLAQLEQLQGTLYATEASEPEPQLLVDNFRVPQELNQRRVLSSFPRAPEGYSTGEVIAILIGAVCGCIGLFLSIHFVGKRMRSARRTQEQDVVFKASSHRTPSNNSHP
SIO_010081: CA14
subclass of: SO_0000673
so part of: CA14
location: join(36872..36926,37063..37083,37596..37922,38004..38146,38912..39007,39078..39144,39245..39402,39485..39611,39745..39765,39855..39939,40037..40118)
location: region:36872-40118:1
so has part: feature:36872-36926:1:exon
so has part: feature:37063-37083:1:exon
so has part: feature:37596-37922:1:exon
so has part: feature:38004-38146:1:exon
so has part: feature:38912-39007:1:exon
so has part: feature:39078-39144:1:exon
so has part: feature:39245-39402:1:exon
so has part: feature:39485-39611:1:exon
so has part: feature:39745-39765:1:exon
so has part: feature:39855-39939:1:exon
so has part: feature:40037-40118:1:exon

XP_030330080.1
type: Protein
SIO_000068: ncbiprotein

position:40118:1
position: 40118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36872-36926:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:37063-37083:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:37596-37922:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:38004-38146:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:38912-39007:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:39078-39144:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:39245-39402:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:39485-39611:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:39745-39765:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:39855-39939:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:40037-40118:1:exon

APH1A
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: APH1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(40344..43520)
location: region:40344-43520:-1
so has part: feature:40344-43520:-1:exon
subclass of: SO_0000010

115602589
type: Gene
SIO_000068: ncbigene

position:40344:-1
position: 40344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43520:-1
position: 43520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40344-43520:-1:exon

APH1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: APH1A
product: aph-1 homolog A, gamma-secretase subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030473825.1
SIO_010081: APH1A
subclass of: SO_0000673
so part of: APH1A
location: complement(join(40344..40838,41131..41254,41513..41640,41716..41838,42035..42108,42475..42645,43375..43520))
location: region:40344-43520:-1
so has part: feature:43375-43520:-1:exon
so has part: feature:42475-42645:-1:exon
so has part: feature:42035-42108:-1:exon
so has part: feature:41716-41838:-1:exon
so has part: feature:41513-41640:-1:exon
so has part: feature:41131-41254:-1:exon
so has part: feature:40344-40838:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43375-43520:-1:exon

position:43375:-1
position: 43375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:42475-42645:-1:exon

position:42475:-1
position: 42475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42645:-1
position: 42645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:42035-42108:-1:exon

position:42035:-1
position: 42035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42108:-1
position: 42108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:41716-41838:-1:exon

position:41716:-1
position: 41716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41838:-1
position: 41838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:41513-41640:-1:exon

position:41513:-1
position: 41513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41640:-1
position: 41640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:41131-41254:-1:exon

position:41131:-1
position: 41131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41254:-1
position: 41254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:40344-40838:-1:exon

position:40838:-1
position: 40838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

APH1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: APH1A
product: aph-1 homolog A, gamma-secretase subunit, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030473826.1
SIO_010081: APH1A
subclass of: SO_0000673
so part of: APH1A
location: complement(join(40344..40844,41131..41254,41513..41640,41716..41838,42035..42108,43375..43513))
location: region:40344-43513:-1
so has part: feature:43375-43513:-1:exon
so has part: feature:42035-42108:-1:exon
so has part: feature:41716-41838:-1:exon
so has part: feature:41513-41640:-1:exon
so has part: feature:41131-41254:-1:exon
so has part: feature:40344-40844:-1:exon

position:43513:-1
position: 43513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43375-43513:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:42035-42108:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:41716-41838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:41513-41640:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:41131-41254:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:40344-40844:-1:exon

position:40844:-1
position: 40844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

APH1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: APH1A
product: aph-1 homolog A, gamma-secretase subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030473824.1
SIO_010081: APH1A
subclass of: SO_0000673
so part of: APH1A
location: complement(join(40344..40844,41131..41254,41513..41640,41716..41838,42035..42108,42475..42645,43375..43513))
location: region:40344-43513:-1
so has part: feature:43375-43513:-1:exon
so has part: feature:42475-42645:-1:exon
so has part: feature:42035-42108:-1:exon
so has part: feature:41716-41838:-1:exon
so has part: feature:41513-41640:-1:exon
so has part: feature:41131-41254:-1:exon
so has part: feature:40344-40844:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43375-43513:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:42475-42645:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42035-42108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:41716-41838:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:41513-41640:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:41131-41254:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:40344-40844:-1:exon

APH1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: APH1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-secretase subunit APH-1A isoform X3
translation: MAAAVFFGCAAIAFGPALALVLLTVAAEPLRVIVLVAGKADEGLVTISEDGRSPMSLRQMAYVSGLSFGIISGIFSVINILADSMGPGIVGIHGDSPYYFITSAFLTMALVLLHTFWGIIFFDACERRRYWCLGLVVTSHLLTSGLTFLNPWYEASLGPIFIITLCTGLWAFITAGGSFHNVLKCLSSAGKQEDDSTVMMYSALQVPCED
SIO_010081: APH1A
subclass of: SO_0000673
so part of: APH1A
location: complement(join(40774..40844,41131..41254,41513..41640,41716..41838,42035..42108,43375..43487))
location: region:40774-43487:-1
so has part: feature:43375-43487:-1:exon
so has part: feature:42035-42108:-1:exon
so has part: feature:41716-41838:-1:exon
so has part: feature:41513-41640:-1:exon
so has part: feature:41131-41254:-1:exon
so has part: feature:40774-40844:-1:exon

XP_030329686.1
type: Protein
SIO_000068: ncbiprotein

position:40774:-1
position: 40774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43487:-1
position: 43487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43375-43487:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:42035-42108:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:41716-41838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:41513-41640:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:41131-41254:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:40774-40844:-1:exon

APH1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: APH1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-secretase subunit APH-1A isoform X2
translation: MAAAVFFGCAAIAFGPALALVLLTVAAEPLRVIVLVAGAFFWLVSLLLASLIWFVMVHVSDQEDPKLQYGLLIFGAAISVLLQELFRFAYFKLLKKADEGLVTISEDGRSPMSLRQMAYVSGLSFGIISGIFSVINILADSMGPGIVGIHGDSPYYFITSAFLTMALVLLHTFWGIIFFDACERRRYWCLGLVVTSHLLTSGLTFLNPWYEASLGPIFIITLCTGLWAFITAGGSFHNVLKCLSCKQEDDSTVMMYSALQVPCED
SIO_010081: APH1A
subclass of: SO_0000673
so part of: APH1A
location: complement(join(40774..40838,41131..41254,41513..41640,41716..41838,42035..42108,42475..42645,43375..43487))
location: region:40774-43487:-1
so has part: feature:43375-43487:-1:exon
so has part: feature:42475-42645:-1:exon
so has part: feature:42035-42108:-1:exon
so has part: feature:41716-41838:-1:exon
so has part: feature:41513-41640:-1:exon
so has part: feature:41131-41254:-1:exon
so has part: feature:40774-40838:-1:exon

XP_030329685.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43375-43487:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:42475-42645:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42035-42108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:41716-41838:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:41513-41640:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:41131-41254:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:40774-40838:-1:exon

APH1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: APH1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-secretase subunit APH-1A isoform X1
translation: MAAAVFFGCAAIAFGPALALVLLTVAAEPLRVIVLVAGAFFWLVSLLLASLIWFVMVHVSDQEDPKLQYGLLIFGAAISVLLQELFRFAYFKLLKKADEGLVTISEDGRSPMSLRQMAYVSGLSFGIISGIFSVINILADSMGPGIVGIHGDSPYYFITSAFLTMALVLLHTFWGIIFFDACERRRYWCLGLVVTSHLLTSGLTFLNPWYEASLGPIFIITLCTGLWAFITAGGSFHNVLKCLSSAGKQEDDSTVMMYSALQVPCED
SIO_010081: APH1A
subclass of: SO_0000673
so part of: APH1A
location: complement(join(40774..40844,41131..41254,41513..41640,41716..41838,42035..42108,42475..42645,43375..43487))
location: region:40774-43487:-1
so has part: feature:43375-43487:-1:exon
so has part: feature:42475-42645:-1:exon
so has part: feature:42035-42108:-1:exon
so has part: feature:41716-41838:-1:exon
so has part: feature:41513-41640:-1:exon
so has part: feature:41131-41254:-1:exon
so has part: feature:40774-40844:-1:exon

XP_030329684.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43375-43487:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:42475-42645:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42035-42108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:41716-41838:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:41513-41640:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:41131-41254:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:40774-40844:-1:exon

SSR2
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: SSR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(44453..47073)
location: region:44453-47073:-1
so has part: feature:44453-47073:-1:exon
subclass of: SO_0000010

115602591
type: Gene
SIO_000068: ncbigene

position:44453:-1
position: 44453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47073:-1
position: 47073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44453-47073:-1:exon

SSR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: SSR2
product: signal sequence receptor subunit 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 18 ESTs, 547 long SRA reads, 19 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030473837.1
SIO_010081: SSR2
subclass of: SO_0000673
so part of: SSR2
location: complement(join(44453..44909,45126..45203,45316..45424,46103..46201,46623..46777,46906..47073))
location: region:44453-47073:-1
so has part: feature:46906-47073:-1:exon
so has part: feature:46623-46777:-1:exon
so has part: feature:46103-46201:-1:exon
so has part: feature:45316-45424:-1:exon
so has part: feature:45126-45203:-1:exon
so has part: feature:44453-44909:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:46906-47073:-1:exon

position:46906:-1
position: 46906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:46623-46777:-1:exon

position:46623:-1
position: 46623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46777:-1
position: 46777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:46103-46201:-1:exon

position:46103:-1
position: 46103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46201:-1
position: 46201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:45316-45424:-1:exon

position:45316:-1
position: 45316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45424:-1
position: 45424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:45126-45203:-1:exon

position:45126:-1
position: 45126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45203:-1
position: 45203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:44453-44909:-1:exon

position:44909:-1
position: 44909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SSR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: SSR2
product: signal sequence receptor subunit 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 18 ESTs, 48 long SRA reads, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030473839.1
SIO_010081: SSR2
subclass of: SO_0000673
so part of: SSR2
location: complement(join(44453..44723,44798..44909,45126..45203,45316..45424,46103..46201,46623..46777,46906..47006))
location: region:44453-47006:-1
so has part: feature:46906-47006:-1:exon
so has part: feature:46623-46777:-1:exon
so has part: feature:46103-46201:-1:exon
so has part: feature:45316-45424:-1:exon
so has part: feature:45126-45203:-1:exon
so has part: feature:44798-44909:-1:exon
so has part: feature:44453-44723:-1:exon

position:47006:-1
position: 47006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46906-47006:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:46623-46777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:46103-46201:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45316-45424:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45126-45203:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44798-44909:-1:exon

position:44798:-1
position: 44798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:44453-44723:-1:exon

position:44723:-1
position: 44723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SSR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: SSR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translocon-associated protein subunit beta
translation: MRLLPLAVLALCSVARCEDGARLLASKSLLNRYAVEGKDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYVAQEGGQVVVGFTSAPGQGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSSKRKYDTPKTKKN
SIO_010081: SSR2
subclass of: SO_0000673
so part of: SSR2
location: complement(join(44799..44909,45126..45203,45316..45424,46103..46201,46623..46777))
location: region:44799-46777:-1
so has part: feature:46623-46777:-1:exon
so has part: feature:46103-46201:-1:exon
so has part: feature:45316-45424:-1:exon
so has part: feature:45126-45203:-1:exon
so has part: feature:44799-44909:-1:exon

XP_030329697.1
type: Protein
SIO_000068: ncbiprotein

position:44799:-1
position: 44799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46623-46777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:46103-46201:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45316-45424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45126-45203:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44799-44909:-1:exon

SSR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: SSR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translocon-associated protein subunit beta
translation: MRLLPLAVLALCSVARCEDGARLLASKSLLNRYAVEGKDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYVAQEGGQVVVGFTSAPGQGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSSKRKYDTPKTKKN
SIO_010081: SSR2
subclass of: SO_0000673
so part of: SSR2
location: complement(join(44799..44909,45126..45203,45316..45424,46103..46201,46623..46777))
location: region:44799-46777:-1
so has part: feature:46623-46777:-1:exon
so has part: feature:46103-46201:-1:exon
so has part: feature:45316-45424:-1:exon
so has part: feature:45126-45203:-1:exon
so has part: feature:44799-44909:-1:exon

XP_030329699.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46623-46777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:46103-46201:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45316-45424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45126-45203:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44799-44909:-1:exon

CCT3
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: CCT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 47107..54753
location: region:47107-54753:1
so has part: feature:47107-54753:1:exon
subclass of: SO_0000010

115602587
type: Gene
SIO_000068: ncbigene

position:47107:1
position: 47107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54753:1
position: 54753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47107-54753:1:exon

CCT3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: CCT3
product: chaperonin containing TCP1 subunit 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 785 long SRA reads, 24 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030473820.1
SIO_010081: CCT3
subclass of: SO_0000673
so part of: CCT3
location: join(47107..47321,48418..48479,48885..48935,49017..49079,49538..49634,50701..50818,50890..51076,51314..51463,51929..52061,52463..52544,52667..52847,53307..53552,54193..54324,54438..54753)
location: region:47107-54753:1
so has part: feature:47107-47321:1:exon
so has part: feature:48418-48479:1:exon
so has part: feature:48885-48935:1:exon
so has part: feature:49017-49079:1:exon
so has part: feature:49538-49634:1:exon
so has part: feature:50701-50818:1:exon
so has part: feature:50890-51076:1:exon
so has part: feature:51314-51463:1:exon
so has part: feature:51929-52061:1:exon
so has part: feature:52463-52544:1:exon
so has part: feature:52667-52847:1:exon
so has part: feature:53307-53552:1:exon
so has part: feature:54193-54324:1:exon
so has part: feature:54438-54753:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47107-47321:1:exon

position:47321:1
position: 47321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:48418-48479:1:exon

position:48418:1
position: 48418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48479:1
position: 48479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:48885-48935:1:exon

position:48885:1
position: 48885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48935:1
position: 48935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:49017-49079:1:exon

position:49017:1
position: 49017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49079:1
position: 49079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:49538-49634:1:exon

position:49538:1
position: 49538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49634:1
position: 49634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:50701-50818:1:exon

position:50701:1
position: 50701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50818:1
position: 50818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:50890-51076:1:exon

position:50890:1
position: 50890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51076:1
position: 51076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:51314-51463:1:exon

position:51314:1
position: 51314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51463:1
position: 51463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:51929-52061:1:exon

position:51929:1
position: 51929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52061:1
position: 52061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:52463-52544:1:exon

position:52463:1
position: 52463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52544:1
position: 52544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:52667-52847:1:exon

position:52667:1
position: 52667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52847:1
position: 52847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:53307-53552:1:exon

position:53307:1
position: 53307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53552:1
position: 53552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:54193-54324:1:exon

position:54193:1
position: 54193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54324:1
position: 54324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:54438-54753:1:exon

position:54438:1
position: 54438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCT3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: CCT3
product: chaperonin containing TCP1 subunit 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 305 long SRA reads, 24 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030473821.1
SIO_010081: CCT3
subclass of: SO_0000673
so part of: CCT3
location: join(47107..47321,48418..48479,48885..48935,49017..49079,49538..49634,50701..50818,50890..51076,51314..51463,51929..52061,52463..52544,52667..52847,53307..53552,54193..54324,54438..54577,54617..54753)
location: region:47107-54753:1
so has part: feature:47107-47321:1:exon
so has part: feature:48418-48479:1:exon
so has part: feature:48885-48935:1:exon
so has part: feature:49017-49079:1:exon
so has part: feature:49538-49634:1:exon
so has part: feature:50701-50818:1:exon
so has part: feature:50890-51076:1:exon
so has part: feature:51314-51463:1:exon
so has part: feature:51929-52061:1:exon
so has part: feature:52463-52544:1:exon
so has part: feature:52667-52847:1:exon
so has part: feature:53307-53552:1:exon
so has part: feature:54193-54324:1:exon
so has part: feature:54438-54577:1:exon
so has part: feature:54617-54753:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47107-47321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48418-48479:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48885-48935:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:49017-49079:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:49538-49634:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:50701-50818:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:50890-51076:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:51314-51463:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:51929-52061:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:52463-52544:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:52667-52847:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:53307-53552:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:54193-54324:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:54438-54577:1:exon

position:54577:1
position: 54577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:54617-54753:1:exon

position:54617:1
position: 54617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCT3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: CCT3
product: chaperonin containing TCP1 subunit 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 585 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030473822.1
SIO_010081: CCT3
subclass of: SO_0000673
so part of: CCT3
location: join(47214..47321,48418..48479,49017..49079,49538..49634,50701..50818,50890..51076,51314..51463,51929..52061,52463..52544,52667..52847,53307..53552,54193..54324,54438..54753)
location: region:47214-54753:1
so has part: feature:47214-47321:1:exon
so has part: feature:48418-48479:1:exon
so has part: feature:49017-49079:1:exon
so has part: feature:49538-49634:1:exon
so has part: feature:50701-50818:1:exon
so has part: feature:50890-51076:1:exon
so has part: feature:51314-51463:1:exon
so has part: feature:51929-52061:1:exon
so has part: feature:52463-52544:1:exon
so has part: feature:52667-52847:1:exon
so has part: feature:53307-53552:1:exon
so has part: feature:54193-54324:1:exon
so has part: feature:54438-54753:1:exon

position:47214:1
position: 47214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47214-47321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48418-48479:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49017-49079:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:49538-49634:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:50701-50818:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:50890-51076:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:51314-51463:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:51929-52061:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:52463-52544:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:52667-52847:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:53307-53552:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:54193-54324:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:54438-54753:1:exon

CCT3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: CCT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-complex protein 1 subunit gamma isoform X1
translation: MMGPRPVLVLSQNMKRESGRKVQTGNITAAKTIADVIRTCLGPRAMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVIIGAYRKALDDMISILKKIGTPVDVNNKEMMLKIIKSAINTKAINRWCELACSIALEAVRTVELEENGRKEIDIKKYAKVEKIPGGFSEDSCVLRGIMVNKDVTHPRMRRLIKNPRIVLLDCSLEYKKGESQTDIEITREEDFARILQMEEEYIQQMCADLIRVKPDLIITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRTDELREEDVGTGARLFEVKKIGDEYFAFITDCKEPKACTIILRGASKEILAEVERNLQDAMQVCRNVLLDPQLVPGGGATEMAVAHALTEKSKGMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRVLTSLRAKHTQDNSQTWGVNGETGALVDMKELGVWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGEEKSQGPAAPESAQE
SIO_010081: CCT3
subclass of: SO_0000673
so part of: CCT3
location: join(47291..47321,48418..48479,48885..48935,49017..49079,49538..49634,50701..50818,50890..51076,51314..51463,51929..52061,52463..52544,52667..52847,53307..53552,54193..54324,54438..54542)
location: region:47291-54542:1
so has part: feature:47291-47321:1:exon
so has part: feature:48418-48479:1:exon
so has part: feature:48885-48935:1:exon
so has part: feature:49017-49079:1:exon
so has part: feature:49538-49634:1:exon
so has part: feature:50701-50818:1:exon
so has part: feature:50890-51076:1:exon
so has part: feature:51314-51463:1:exon
so has part: feature:51929-52061:1:exon
so has part: feature:52463-52544:1:exon
so has part: feature:52667-52847:1:exon
so has part: feature:53307-53552:1:exon
so has part: feature:54193-54324:1:exon
so has part: feature:54438-54542:1:exon

XP_030329680.1
type: Protein
SIO_000068: ncbiprotein

position:47291:1
position: 47291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54542:1
position: 54542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47291-47321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48418-48479:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48885-48935:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:49017-49079:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:49538-49634:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:50701-50818:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:50890-51076:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:51314-51463:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:51929-52061:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:52463-52544:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:52667-52847:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:53307-53552:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:54193-54324:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:54438-54542:1:exon

CCT3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: CCT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-complex protein 1 subunit gamma isoform X1
translation: MMGPRPVLVLSQNMKRESGRKVQTGNITAAKTIADVIRTCLGPRAMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVIIGAYRKALDDMISILKKIGTPVDVNNKEMMLKIIKSAINTKAINRWCELACSIALEAVRTVELEENGRKEIDIKKYAKVEKIPGGFSEDSCVLRGIMVNKDVTHPRMRRLIKNPRIVLLDCSLEYKKGESQTDIEITREEDFARILQMEEEYIQQMCADLIRVKPDLIITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRTDELREEDVGTGARLFEVKKIGDEYFAFITDCKEPKACTIILRGASKEILAEVERNLQDAMQVCRNVLLDPQLVPGGGATEMAVAHALTEKSKGMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRVLTSLRAKHTQDNSQTWGVNGETGALVDMKELGVWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGEEKSQGPAAPESAQE
SIO_010081: CCT3
subclass of: SO_0000673
so part of: CCT3
location: join(47291..47321,48418..48479,48885..48935,49017..49079,49538..49634,50701..50818,50890..51076,51314..51463,51929..52061,52463..52544,52667..52847,53307..53552,54193..54324,54438..54542)
location: region:47291-54542:1
so has part: feature:47291-47321:1:exon
so has part: feature:48418-48479:1:exon
so has part: feature:48885-48935:1:exon
so has part: feature:49017-49079:1:exon
so has part: feature:49538-49634:1:exon
so has part: feature:50701-50818:1:exon
so has part: feature:50890-51076:1:exon
so has part: feature:51314-51463:1:exon
so has part: feature:51929-52061:1:exon
so has part: feature:52463-52544:1:exon
so has part: feature:52667-52847:1:exon
so has part: feature:53307-53552:1:exon
so has part: feature:54193-54324:1:exon
so has part: feature:54438-54542:1:exon

XP_030329681.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47291-47321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48418-48479:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48885-48935:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:49017-49079:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:49538-49634:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:50701-50818:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:50890-51076:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:51314-51463:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:51929-52061:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:52463-52544:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:52667-52847:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:53307-53552:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:54193-54324:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:54438-54542:1:exon

CCT3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: CCT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-complex protein 1 subunit gamma isoform X2
translation: MMGPRPVLVLSQNMKRESGRKVQTGNITAAKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVIIGAYRKALDDMISILKKIGTPVDVNNKEMMLKIIKSAINTKAINRWCELACSIALEAVRTVELEENGRKEIDIKKYAKVEKIPGGFSEDSCVLRGIMVNKDVTHPRMRRLIKNPRIVLLDCSLEYKKGESQTDIEITREEDFARILQMEEEYIQQMCADLIRVKPDLIITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRTDELREEDVGTGARLFEVKKIGDEYFAFITDCKEPKACTIILRGASKEILAEVERNLQDAMQVCRNVLLDPQLVPGGGATEMAVAHALTEKSKGMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRVLTSLRAKHTQDNSQTWGVNGETGALVDMKELGVWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGEEKSQGPAAPESAQE
SIO_010081: CCT3
subclass of: SO_0000673
so part of: CCT3
location: join(47291..47321,48418..48479,49017..49079,49538..49634,50701..50818,50890..51076,51314..51463,51929..52061,52463..52544,52667..52847,53307..53552,54193..54324,54438..54542)
location: region:47291-54542:1
so has part: feature:47291-47321:1:exon
so has part: feature:48418-48479:1:exon
so has part: feature:49017-49079:1:exon
so has part: feature:49538-49634:1:exon
so has part: feature:50701-50818:1:exon
so has part: feature:50890-51076:1:exon
so has part: feature:51314-51463:1:exon
so has part: feature:51929-52061:1:exon
so has part: feature:52463-52544:1:exon
so has part: feature:52667-52847:1:exon
so has part: feature:53307-53552:1:exon
so has part: feature:54193-54324:1:exon
so has part: feature:54438-54542:1:exon

XP_030329682.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47291-47321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48418-48479:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49017-49079:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:49538-49634:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:50701-50818:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:50890-51076:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:51314-51463:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:51929-52061:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:52463-52544:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:52667-52847:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:53307-53552:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:54193-54324:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:54438-54542:1:exon

TMEM79
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: TMEM79
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(55325..58430)
location: region:55325-58430:-1
so has part: feature:55325-58430:-1:exon
subclass of: SO_0000010

115602588
type: Gene
SIO_000068: ncbigene

position:55325:-1
position: 55325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58430:-1
position: 58430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55325-58430:-1:exon

TMEM79
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: TMEM79
product: transmembrane protein 79
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 56 long SRA reads, 3 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030473823.1
SIO_010081: TMEM79
subclass of: SO_0000673
so part of: TMEM79
location: complement(join(55325..55651,55798..56011,56212..56974,57537..57629,57768..58430))
location: region:55325-58430:-1
so has part: feature:57768-58430:-1:exon
so has part: feature:57537-57629:-1:exon
so has part: feature:56212-56974:-1:exon
so has part: feature:55798-56011:-1:exon
so has part: feature:55325-55651:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:57768-58430:-1:exon

position:57768:-1
position: 57768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:57537-57629:-1:exon

position:57537:-1
position: 57537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57629:-1
position: 57629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:56212-56974:-1:exon

position:56212:-1
position: 56212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56974:-1
position: 56974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:55798-56011:-1:exon

position:55798:-1
position: 55798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56011:-1
position: 56011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:55325-55651:-1:exon

position:55651:-1
position: 55651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM79
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: TMEM79
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 79
translation: MSAADPVLPPEEVALLELGKGAPATPLDKVPPVLGDPDATLPWDRCQLSAAPGRRRASPEGGREDPEEATVVPKAEPGDEEAPGLPVVASHVFVPIDPQCIEQSPGKLKKQQEEGKGGYLPPSDRPSSQRQKQVFLPMGPSRYRDPLGFKGRVAKPSEGARCPCAKDCDGGNLKAVASVVGALLLCPCLIYGAYVFLPFDAPLLPTISTRLVYTLRCASFATFPIVLGMIVSGISRLCSSALEPFGELQREVEIHRTYVAQSIHLFILYFFNMAVLATYLQQEVLKLIPLLTGLFAISRLIYWLAYAIGRSFRVFGFSMSFLPLLAMLLWNLYSMLVLEPENLLAVAEAKPEDHSKNTGAKLRYWG
SIO_010081: TMEM79
subclass of: SO_0000673
so part of: TMEM79
location: complement(join(55447..55651,55798..56011,56212..56893))
location: region:55447-56893:-1
so has part: feature:56212-56893:-1:exon
so has part: feature:55798-56011:-1:exon
so has part: feature:55447-55651:-1:exon

XP_030329683.1
type: Protein
SIO_000068: ncbiprotein

position:55447:-1
position: 55447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56893:-1
position: 56893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56212-56893:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:55798-56011:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:55447-55651:-1:exon

SMG5
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: SMG5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 58593..77869
location: region:58593-77869:1
so has part: feature:58593-77869:1:exon
subclass of: SO_0000010

115602585
type: Gene
SIO_000068: ncbigene

position:58593:1
position: 58593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77869:1
position: 77869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58593-77869:1:exon

SMG5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: SMG5
product: SMG5 nonsense mediated mRNA decay factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 91 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030473816.2
SIO_010081: SMG5
subclass of: SO_0000673
so part of: SMG5
location: join(58593..58682,61673..61771,62354..62477,62889..63045,63547..63636,64697..64786,65365..65443,65717..65842,66261..66329,67733..67941,68057..68194,68761..69456,70845..71014,71265..71340,71751..71926,72110..72268,72464..72523,73048..73207,73540..73630,74130..74204,74492..74630,75222..77869)
location: region:58593-77869:1
so has part: feature:58593-58682:1:exon
so has part: feature:61673-61771:1:exon
so has part: feature:62354-62477:1:exon
so has part: feature:62889-63045:1:exon
so has part: feature:63547-63636:1:exon
so has part: feature:64697-64786:1:exon
so has part: feature:65365-65443:1:exon
so has part: feature:65717-65842:1:exon
so has part: feature:66261-66329:1:exon
so has part: feature:67733-67941:1:exon
so has part: feature:68057-68194:1:exon
so has part: feature:68761-69456:1:exon
so has part: feature:70845-71014:1:exon
so has part: feature:71265-71340:1:exon
so has part: feature:71751-71926:1:exon
so has part: feature:72110-72268:1:exon
so has part: feature:72464-72523:1:exon
so has part: feature:73048-73207:1:exon
so has part: feature:73540-73630:1:exon
so has part: feature:74130-74204:1:exon
so has part: feature:74492-74630:1:exon
so has part: feature:75222-77869:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:58593-58682:1:exon

position:58682:1
position: 58682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:61673-61771:1:exon

position:61673:1
position: 61673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61771:1
position: 61771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:62354-62477:1:exon

position:62354:1
position: 62354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62477:1
position: 62477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:62889-63045:1:exon

position:62889:1
position: 62889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63045:1
position: 63045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:63547-63636:1:exon

position:63547:1
position: 63547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63636:1
position: 63636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:64697-64786:1:exon

position:64697:1
position: 64697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64786:1
position: 64786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:65365-65443:1:exon

position:65365:1
position: 65365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65443:1
position: 65443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:65717-65842:1:exon

position:65717:1
position: 65717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65842:1
position: 65842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:66261-66329:1:exon

position:66261:1
position: 66261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66329:1
position: 66329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:67733-67941:1:exon

position:67733:1
position: 67733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67941:1
position: 67941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:68057-68194:1:exon

position:68057:1
position: 68057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68194:1
position: 68194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:68761-69456:1:exon

position:68761:1
position: 68761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69456:1
position: 69456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:70845-71014:1:exon

position:70845:1
position: 70845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71014:1
position: 71014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:71265-71340:1:exon

position:71265:1
position: 71265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71340:1
position: 71340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:71751-71926:1:exon

position:71751:1
position: 71751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71926:1
position: 71926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:72110-72268:1:exon

position:72110:1
position: 72110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72268:1
position: 72268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:72464-72523:1:exon

position:72464:1
position: 72464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72523:1
position: 72523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:73048-73207:1:exon

position:73048:1
position: 73048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73207:1
position: 73207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:73540-73630:1:exon

position:73540:1
position: 73540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73630:1
position: 73630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:74130-74204:1:exon

position:74130:1
position: 74130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74204:1
position: 74204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:74492-74630:1:exon

position:74492:1
position: 74492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74630:1
position: 74630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:75222-77869:1:exon

position:75222:1
position: 75222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SMG5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: SMG5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SMG5
translation: MSQGGGAGGESGEPEAKVLHTKRLYRAVVEAVHRLDLILGNKAAYQEVFKPENISLRNKLRELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGIGFYQHLLLYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASEKEMEWAQMACHRCLVYLGDLARYQNELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEATYCYLRCIQSEVSFEGAYGNLKRLYDKAAKMYHQLKKCETRRLSPSKKRGKDIKRLLVSFMYLQSLLQPKSSSLDSELTSLCQSVLEDFNLCLFYLPSPPNLSSTSEDEEEYESGYSFLPDLLIFRMVIICLMSVHSLKRAGSKQYSAAIAFTLALFSHLINHVNIRLQAELEEGENPVPAFQSDSTDDQEPREPLIEKEAEGDLANHQASEEQRKSDCKKSKKYSRLSCLRRRRHPQKVDESDLSEGFDSDSSQGSIKGSDGSESGSEKSDEEAEAAFDVETDSDMNSQESRSDLEDMEDEPGEEGSGRGKSGPKEALKNCVDGSGLGDSKSSSSSKAEAPDPALNGPASLSTSDTSIASNLQAMSTQLFQTKRCFRLAPTFSNILLKPNSEPPVLKDGIEGKPCVNGDLEKSSLAEQDDVSDSEESISSNKSCRNERSLQEKLQIMTNEGLLLTVKVFLDWLRTNTDLIIMCAQSSQSLWNRLSVLLNLLPSAADLQESGLALCNEVKDILSGAELPDLKANLLLPEDVALRNLPPLRSAHKRFNFEQDRPIFTPLEESVVRICCIRSFGHFISHLQGSILQFNPELGIFISIAQSEQDNLLHQAQAQFHMAAEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQSAMSPYLVPDTQALCQHLAVIKQLATSGRFIIIIPRTVIDGLDFLKKENAGARDSIRYLEAEFKKGNRYIRCQKDVGKSFERHKLKRQDLDAWNLYKILDSCKQLTVSQGSGEDDTTGMVTIITGFQLEDPSMFSAPMQSAIQAAASASVEIKNVLEFYKQWKEMG
SIO_010081: SMG5
subclass of: SO_0000673
so part of: SMG5
location: join(58606..58682,61673..61771,62354..62477,62889..63045,63547..63636,64697..64786,65365..65443,65717..65842,66261..66329,67733..67941,68057..68194,68761..69456,70845..71014,71265..71340,71751..71926,72110..72268,72464..72523,73048..73207,73540..73630,74130..74204,74492..74630,75222..75305)
location: region:58606-75305:1
so has part: feature:58606-58682:1:exon
so has part: feature:61673-61771:1:exon
so has part: feature:62354-62477:1:exon
so has part: feature:62889-63045:1:exon
so has part: feature:63547-63636:1:exon
so has part: feature:64697-64786:1:exon
so has part: feature:65365-65443:1:exon
so has part: feature:65717-65842:1:exon
so has part: feature:66261-66329:1:exon
so has part: feature:67733-67941:1:exon
so has part: feature:68057-68194:1:exon
so has part: feature:68761-69456:1:exon
so has part: feature:70845-71014:1:exon
so has part: feature:71265-71340:1:exon
so has part: feature:71751-71926:1:exon
so has part: feature:72110-72268:1:exon
so has part: feature:72464-72523:1:exon
so has part: feature:73048-73207:1:exon
so has part: feature:73540-73630:1:exon
so has part: feature:74130-74204:1:exon
so has part: feature:74492-74630:1:exon
so has part: feature:75222-75305:1:exon

XP_030329676.1
type: Protein
SIO_000068: ncbiprotein

position:58606:1
position: 58606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75305:1
position: 75305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58606-58682:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:61673-61771:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:62354-62477:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:62889-63045:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:63547-63636:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:64697-64786:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:65365-65443:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:65717-65842:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:66261-66329:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:67733-67941:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:68057-68194:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:68761-69456:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:70845-71014:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:71265-71340:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:71751-71926:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:72110-72268:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:72464-72523:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:73048-73207:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:73540-73630:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:74130-74204:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:74492-74630:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:75222-75305:1:exon

BGLAP
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: BGLAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(78626..80265)
location: region:78626-80265:-1
so has part: feature:78626-80265:-1:exon
subclass of: SO_0000010

115602593
type: Gene
SIO_000068: ncbigene

position:78626:-1
position: 78626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80265:-1
position: 80265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78626-80265:-1:exon

BGLAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: BGLAP
product: bone gamma-carboxyglutamate protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 3 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030473842.1
SIO_010081: BGLAP
subclass of: SO_0000673
so part of: BGLAP
location: complement(join(78626..78874,78978..79041,79136..79177,79576..80265))
location: region:78626-80265:-1
so has part: feature:79576-80265:-1:exon
so has part: feature:79136-79177:-1:exon
so has part: feature:78978-79041:-1:exon
so has part: feature:78626-78874:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:79576-80265:-1:exon

position:79576:-1
position: 79576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:79136-79177:-1:exon

position:79136:-1
position: 79136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79177:-1
position: 79177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:78978-79041:-1:exon

position:78978:-1
position: 78978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79041:-1
position: 79041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:78626-78874:-1:exon

position:78874:-1
position: 78874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BGLAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: BGLAP
product: bone gamma-carboxyglutamate protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 4 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030473841.1
SIO_010081: BGLAP
subclass of: SO_0000673
so part of: BGLAP
location: complement(join(78627..78877,78978..79041,79136..79177,79576..80265))
location: region:78627-80265:-1
so has part: feature:79576-80265:-1:exon
so has part: feature:79136-79177:-1:exon
so has part: feature:78978-79041:-1:exon
so has part: feature:78627-78877:-1:exon

position:78627:-1
position: 78627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79576-80265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79136-79177:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78978-79041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78627-78877:-1:exon

position:78877:-1
position: 78877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BGLAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: BGLAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: osteocalcin isoform X2
translation: MRLLVLLPLLALLALGLCRRGPERSLSADSPRSEAFASKRTSAEMRRHKRNYIYDSVYGVVRDPLEAKREVCEFNPDCDELADQIGFQEAYRRYYGLV
SIO_010081: BGLAP
subclass of: SO_0000673
so part of: BGLAP
location: complement(join(78745..78874,78978..79041,79136..79177,79576..79636))
location: region:78745-79636:-1
so has part: feature:79576-79636:-1:exon
so has part: feature:79136-79177:-1:exon
so has part: feature:78978-79041:-1:exon
so has part: feature:78745-78874:-1:exon

XP_030329702.1
type: Protein
SIO_000068: ncbiprotein

position:78745:-1
position: 78745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79636:-1
position: 79636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79576-79636:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79136-79177:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78978-79041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78745-78874:-1:exon

BGLAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: BGLAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: osteocalcin isoform X1
translation: MRLLVLLPLLALLALGLCRRGPERSLSADSPRSEAFASKRTSAEMRRHKRNYIYDSSVYGVVRDPLEAKREVCEFNPDCDELADQIGFQEAYRRYYGLV
SIO_010081: BGLAP
subclass of: SO_0000673
so part of: BGLAP
location: complement(join(78745..78877,78978..79041,79136..79177,79576..79636))
location: region:78745-79636:-1
so has part: feature:79576-79636:-1:exon
so has part: feature:79136-79177:-1:exon
so has part: feature:78978-79041:-1:exon
so has part: feature:78745-78877:-1:exon

XP_030329701.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79576-79636:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79136-79177:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78978-79041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78745-78877:-1:exon

PMF1
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: PMF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(80359..82205)
location: region:80359-82205:-1
so has part: feature:80359-82205:-1:exon
subclass of: SO_0000010

115602592
type: Gene
SIO_000068: ncbigene

position:80359:-1
position: 80359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82205:-1
position: 82205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80359-82205:-1:exon

PMF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: PMF1
product: polyamine modulated factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 244 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030473840.1
SIO_010081: PMF1
subclass of: SO_0000673
so part of: PMF1
location: complement(join(80359..80832,81052..81247,81653..81753,81851..81956,82047..82205))
location: region:80359-82205:-1
so has part: feature:82047-82205:-1:exon
so has part: feature:81851-81956:-1:exon
so has part: feature:81653-81753:-1:exon
so has part: feature:81052-81247:-1:exon
so has part: feature:80359-80832:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:82047-82205:-1:exon

position:82047:-1
position: 82047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:81851-81956:-1:exon

position:81851:-1
position: 81851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81956:-1
position: 81956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:81653-81753:-1:exon

position:81653:-1
position: 81653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81753:-1
position: 81753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:81052-81247:-1:exon

position:81052:-1
position: 81052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81247:-1
position: 81247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:80359-80832:-1:exon

position:80832:-1
position: 80832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PMF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: PMF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyamine-modulated factor 1
translation: MAEARGGGSDGGGGSSSVSGGPGRAQLFSTVMDAFLGKLVAAGSYQRFASCYRSFYRLQPEVTKSIHSQFVAQLQASIRAEVQEVMDEGNLEALLDSLDKIVEEAEPQEEPAWRPSGIPEEDARSALVPYLLKHRSYLLRALKNKEEENKKVAESVLAGRGRISELQQQIQAHKRAWQALSKEQQELVLTFQQPQ
SIO_010081: PMF1
subclass of: SO_0000673
so part of: PMF1
location: complement(join(80779..80832,81052..81247,81653..81753,81851..81956,82047..82177))
location: region:80779-82177:-1
so has part: feature:82047-82177:-1:exon
so has part: feature:81851-81956:-1:exon
so has part: feature:81653-81753:-1:exon
so has part: feature:81052-81247:-1:exon
so has part: feature:80779-80832:-1:exon

XP_030329700.1
type: Protein
SIO_000068: ncbiprotein

position:80779:-1
position: 80779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82177:-1
position: 82177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82047-82177:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:81851-81956:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:81653-81753:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:81052-81247:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:80779-80832:-1:exon

SLC25A44
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: SLC25A44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(83077..89899)
location: region:83077-89899:-1
so has part: feature:83077-89899:-1:exon
subclass of: SO_0000010

115602595
type: Gene
SIO_000068: ncbigene

position:83077:-1
position: 83077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89899:-1
position: 89899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83077-89899:-1:exon

SLC25A44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: SLC25A44
product: solute carrier family 25 member 44, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 91 long SRA reads, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030473845.1
SIO_010081: SLC25A44
subclass of: SO_0000673
so part of: SLC25A44
location: complement(join(83077..85091,85640..85767,87063..87787,88211..88321,89815..89899))
location: region:83077-89899:-1
so has part: feature:89815-89899:-1:exon
so has part: feature:88211-88321:-1:exon
so has part: feature:87063-87787:-1:exon
so has part: feature:85640-85767:-1:exon
so has part: feature:83077-85091:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89815-89899:-1:exon

position:89815:-1
position: 89815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:88211-88321:-1:exon

position:88211:-1
position: 88211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88321:-1
position: 88321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:87063-87787:-1:exon

position:87063:-1
position: 87063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87787:-1
position: 87787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:85640-85767:-1:exon

position:85640:-1
position: 85640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85767:-1
position: 85767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:83077-85091:-1:exon

position:85091:-1
position: 85091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC25A44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: SLC25A44
product: solute carrier family 25 member 44, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 90 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030473848.1
SIO_010081: SLC25A44
subclass of: SO_0000673
so part of: SLC25A44
location: complement(join(83077..85091,85640..85767,87063..87787,88211..88321,89540..89562))
location: region:83077-89562:-1
so has part: feature:89540-89562:-1:exon
so has part: feature:88211-88321:-1:exon
so has part: feature:87063-87787:-1:exon
so has part: feature:85640-85767:-1:exon
so has part: feature:83077-85091:-1:exon

position:89562:-1
position: 89562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89540-89562:-1:exon

position:89540:-1
position: 89540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:88211-88321:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:87063-87787:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85640-85767:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83077-85091:-1:exon

SLC25A44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: SLC25A44
product: solute carrier family 25 member 44, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 90 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030473846.1
SIO_010081: SLC25A44
subclass of: SO_0000673
so part of: SLC25A44
location: complement(join(83077..85091,85640..85767,87063..87787,88211..88321,88575..88800))
location: region:83077-88800:-1
so has part: feature:88575-88800:-1:exon
so has part: feature:88211-88321:-1:exon
so has part: feature:87063-87787:-1:exon
so has part: feature:85640-85767:-1:exon
so has part: feature:83077-85091:-1:exon

position:88800:-1
position: 88800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88575-88800:-1:exon

position:88575:-1
position: 88575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:88211-88321:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:87063-87787:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85640-85767:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83077-85091:-1:exon

SLC25A44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: SLC25A44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 25 member 44
translation: MEDKRNIPIIEWEHLDKRKFYVFGICMTMMIRVSVYPFTLIRTRLQVQKGKSLYKGTFDAFVKILQTEGTAGLYRGFLVNTFTLISGQCYVTTYELTRKYVSRYNNNNAVKSLVAGGSASLVAQSITVPIDVISQHLMMQRKGESMGRFKVQNQDGKRLLVFGQTKDIIVQIFKADGFRGFYRGYVASLLTYIPNSAVWWPFYHFYAEQLSSLTPKDCPHLLLQAISGPLAAATASTLTNPMDVIRARVQVEGKSSIILTFKQLMAEEGPWGLTKGLSARIISATPSTIVIVVGYETLKKLSLRPELVDSRHW
SIO_010081: SLC25A44
subclass of: SO_0000673
so part of: SLC25A44
location: complement(join(84900..85091,85640..85767,87063..87684))
location: region:84900-87684:-1
so has part: feature:87063-87684:-1:exon
so has part: feature:85640-85767:-1:exon
so has part: feature:84900-85091:-1:exon

XP_030329705.1
type: Protein
SIO_000068: ncbiprotein

position:84900:-1
position: 84900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87684:-1
position: 87684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87063-87684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:85640-85767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84900-85091:-1:exon

SLC25A44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: SLC25A44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 25 member 44
translation: MEDKRNIPIIEWEHLDKRKFYVFGICMTMMIRVSVYPFTLIRTRLQVQKGKSLYKGTFDAFVKILQTEGTAGLYRGFLVNTFTLISGQCYVTTYELTRKYVSRYNNNNAVKSLVAGGSASLVAQSITVPIDVISQHLMMQRKGESMGRFKVQNQDGKRLLVFGQTKDIIVQIFKADGFRGFYRGYVASLLTYIPNSAVWWPFYHFYAEQLSSLTPKDCPHLLLQAISGPLAAATASTLTNPMDVIRARVQVEGKSSIILTFKQLMAEEGPWGLTKGLSARIISATPSTIVIVVGYETLKKLSLRPELVDSRHW
SIO_010081: SLC25A44
subclass of: SO_0000673
so part of: SLC25A44
location: complement(join(84900..85091,85640..85767,87063..87684))
location: region:84900-87684:-1
so has part: feature:87063-87684:-1:exon
so has part: feature:85640-85767:-1:exon
so has part: feature:84900-85091:-1:exon

XP_030329706.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87063-87684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:85640-85767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84900-85091:-1:exon

SLC25A44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: SLC25A44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 25 member 44
translation: MEDKRNIPIIEWEHLDKRKFYVFGICMTMMIRVSVYPFTLIRTRLQVQKGKSLYKGTFDAFVKILQTEGTAGLYRGFLVNTFTLISGQCYVTTYELTRKYVSRYNNNNAVKSLVAGGSASLVAQSITVPIDVISQHLMMQRKGESMGRFKVQNQDGKRLLVFGQTKDIIVQIFKADGFRGFYRGYVASLLTYIPNSAVWWPFYHFYAEQLSSLTPKDCPHLLLQAISGPLAAATASTLTNPMDVIRARVQVEGKSSIILTFKQLMAEEGPWGLTKGLSARIISATPSTIVIVVGYETLKKLSLRPELVDSRHW
SIO_010081: SLC25A44
subclass of: SO_0000673
so part of: SLC25A44
location: complement(join(84900..85091,85640..85767,87063..87684))
location: region:84900-87684:-1
so has part: feature:87063-87684:-1:exon
so has part: feature:85640-85767:-1:exon
so has part: feature:84900-85091:-1:exon

XP_030329708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87063-87684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:85640-85767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84900-85091:-1:exon

SEMA4A
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: SEMA4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(90223..98810)
location: region:90223-98810:-1
so has part: feature:90223-98810:-1:exon
subclass of: SO_0000010

115602594
type: Gene
SIO_000068: ncbigene

position:90223:-1
position: 90223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98810:-1
position: 98810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90223-98810:-1:exon

SEMA4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: SEMA4A
product: semaphorin 4A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 long SRA reads, 26 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030473843.1
SIO_010081: SEMA4A
subclass of: SO_0000673
so part of: SEMA4A
location: complement(join(90223..91236,91323..91435,92068..92228,92305..92420,92517..92706,92919..93069,93142..93308,93758..93888,93972..94088,94184..94292,94603..94701,94790..94852,94926..95086,95988..96116,98703..98810))
location: region:90223-98810:-1
so has part: feature:98703-98810:-1:exon
so has part: feature:95988-96116:-1:exon
so has part: feature:94926-95086:-1:exon
so has part: feature:94790-94852:-1:exon
so has part: feature:94603-94701:-1:exon
so has part: feature:94184-94292:-1:exon
so has part: feature:93972-94088:-1:exon
so has part: feature:93758-93888:-1:exon
so has part: feature:93142-93308:-1:exon
so has part: feature:92919-93069:-1:exon
so has part: feature:92517-92706:-1:exon
so has part: feature:92305-92420:-1:exon
so has part: feature:92068-92228:-1:exon
so has part: feature:91323-91435:-1:exon
so has part: feature:90223-91236:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:98703-98810:-1:exon

position:98703:-1
position: 98703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:95988-96116:-1:exon

position:95988:-1
position: 95988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96116:-1
position: 96116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:94926-95086:-1:exon

position:94926:-1
position: 94926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95086:-1
position: 95086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:94790-94852:-1:exon

position:94790:-1
position: 94790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94852:-1
position: 94852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:94603-94701:-1:exon

position:94603:-1
position: 94603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94701:-1
position: 94701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:94184-94292:-1:exon

position:94184:-1
position: 94184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94292:-1
position: 94292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:93972-94088:-1:exon

position:93972:-1
position: 93972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94088:-1
position: 94088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:93758-93888:-1:exon

position:93758:-1
position: 93758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93888:-1
position: 93888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:93142-93308:-1:exon

position:93142:-1
position: 93142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93308:-1
position: 93308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:92919-93069:-1:exon

position:92919:-1
position: 92919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93069:-1
position: 93069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:92517-92706:-1:exon

position:92517:-1
position: 92517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92706:-1
position: 92706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:92305-92420:-1:exon

position:92305:-1
position: 92305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92420:-1
position: 92420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:92068-92228:-1:exon

position:92068:-1
position: 92068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92228:-1
position: 92228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:91323-91435:-1:exon

position:91323:-1
position: 91323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91435:-1
position: 91435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:90223-91236:-1:exon

position:91236:-1
position: 91236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SEMA4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: SEMA4A
product: semaphorin 4A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 long SRA reads, 26 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030473844.1
SIO_010081: SEMA4A
subclass of: SO_0000673
so part of: SEMA4A
location: complement(join(90223..91236,91323..91435,92068..92228,92305..92420,92517..92706,92919..93069,93142..93308,93758..93888,93972..94088,94184..94292,94603..94701,94790..94852,94926..95086,95988..96116,96575..96689))
location: region:90223-96689:-1
so has part: feature:96575-96689:-1:exon
so has part: feature:95988-96116:-1:exon
so has part: feature:94926-95086:-1:exon
so has part: feature:94790-94852:-1:exon
so has part: feature:94603-94701:-1:exon
so has part: feature:94184-94292:-1:exon
so has part: feature:93972-94088:-1:exon
so has part: feature:93758-93888:-1:exon
so has part: feature:93142-93308:-1:exon
so has part: feature:92919-93069:-1:exon
so has part: feature:92517-92706:-1:exon
so has part: feature:92305-92420:-1:exon
so has part: feature:92068-92228:-1:exon
so has part: feature:91323-91435:-1:exon
so has part: feature:90223-91236:-1:exon

position:96689:-1
position: 96689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96575-96689:-1:exon

position:96575:-1
position: 96575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:95988-96116:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94926-95086:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94790-94852:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94603-94701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94184-94292:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93972-94088:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:93758-93888:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:93142-93308:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:92919-93069:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:92517-92706:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:92305-92420:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:92068-92228:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:91323-91435:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:90223-91236:-1:exon

SEMA4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: SEMA4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: semaphorin-4A isoform X1
translation: MLPPARPWAAAGMVPGRSMGAPPLPPNALRLLWALLVPVALLCAEPRPRATFHSGDPRRTLTHFSQANVLHYDIFLLSEDEEELYVGARDRVLALAVGTPGTIRAKASITWGPTAEKTSQCAFKKKSQETECFNFIRVLVPLNQTHLYVCGTYAFSPACTYILLENFTLVSNSRGQPFLDGKGQCPFDPQHTYTALLVEGELYAGTMNNFQGNEPIISRSLGSRTLLKTDAFLRWLSADAAFVASFSIPRDDKVYFFFEETAEEFDFFERLLVPRVARVCKSDVGGDKVLQKKWTTFLKAQLLCSQPGHFPFNVIHHAFALPQPGGADFYAVFTSQWQEGRAGSAAVCAYSHEELEKVFEGKYKELNKESSRWTVYGGPDMSPRPGSCSMGPSSDKALTFMKDHFLMDGKVSPTQGRPLLVKTDVTYTRIVVDETRGASGTIYRVLFLATADGFLHKAVELPGAPHIVESIQLFGTPEPVKNLLLAPGKGILYVGYSGGVLQVPLANCSLHRSCAECVLARDPYCGWNSAEGSCQPTRGAQDTSTWLQDIEAESPATLCHRGRSVAMPRAWGAPEDPTAERLTPPLNAVVRLPCPHPSALATYHWQQPHGDRGDTALLPDHTLVVIMQRGTAGTYKCQATENGYTWTVAHYQLRDPSGATPPPDGLAEDGLPWGSSGAPRSYWPQFVTVTVLLAVTLAAVACLALLAYHEQLKARSKVRGCSAPHSPPTQRREKVPLNGGTGEPAAPGGTTEEEEEEEEGSQPCCLQLDGDIDADNNRLRVPMGGPA
SIO_010081: SEMA4A
subclass of: SO_0000673
so part of: SEMA4A
location: complement(join(90614..91236,91323..91435,92068..92228,92305..92420,92517..92706,92919..93069,93142..93308,93758..93888,93972..94088,94184..94292,94603..94701,94790..94852,94926..95086,95988..96116,98703..98736))
location: region:90614-98736:-1
so has part: feature:98703-98736:-1:exon
so has part: feature:95988-96116:-1:exon
so has part: feature:94926-95086:-1:exon
so has part: feature:94790-94852:-1:exon
so has part: feature:94603-94701:-1:exon
so has part: feature:94184-94292:-1:exon
so has part: feature:93972-94088:-1:exon
so has part: feature:93758-93888:-1:exon
so has part: feature:93142-93308:-1:exon
so has part: feature:92919-93069:-1:exon
so has part: feature:92517-92706:-1:exon
so has part: feature:92305-92420:-1:exon
so has part: feature:92068-92228:-1:exon
so has part: feature:91323-91435:-1:exon
so has part: feature:90614-91236:-1:exon

XP_030329703.1
type: Protein
SIO_000068: ncbiprotein

position:90614:-1
position: 90614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98736:-1
position: 98736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98703-98736:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95988-96116:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94926-95086:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94790-94852:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94603-94701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94184-94292:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93972-94088:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:93758-93888:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:93142-93308:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:92919-93069:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:92517-92706:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:92305-92420:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:92068-92228:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:91323-91435:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:90614-91236:-1:exon

SEMA4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: SEMA4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: semaphorin-4A isoform X2
translation: MVPGRSMGAPPLPPNALRLLWALLVPVALLCAEPRPRATFHSGDPRRTLTHFSQANVLHYDIFLLSEDEEELYVGARDRVLALAVGTPGTIRAKASITWGPTAEKTSQCAFKKKSQETECFNFIRVLVPLNQTHLYVCGTYAFSPACTYILLENFTLVSNSRGQPFLDGKGQCPFDPQHTYTALLVEGELYAGTMNNFQGNEPIISRSLGSRTLLKTDAFLRWLSADAAFVASFSIPRDDKVYFFFEETAEEFDFFERLLVPRVARVCKSDVGGDKVLQKKWTTFLKAQLLCSQPGHFPFNVIHHAFALPQPGGADFYAVFTSQWQEGRAGSAAVCAYSHEELEKVFEGKYKELNKESSRWTVYGGPDMSPRPGSCSMGPSSDKALTFMKDHFLMDGKVSPTQGRPLLVKTDVTYTRIVVDETRGASGTIYRVLFLATADGFLHKAVELPGAPHIVESIQLFGTPEPVKNLLLAPGKGILYVGYSGGVLQVPLANCSLHRSCAECVLARDPYCGWNSAEGSCQPTRGAQDTSTWLQDIEAESPATLCHRGRSVAMPRAWGAPEDPTAERLTPPLNAVVRLPCPHPSALATYHWQQPHGDRGDTALLPDHTLVVIMQRGTAGTYKCQATENGYTWTVAHYQLRDPSGATPPPDGLAEDGLPWGSSGAPRSYWPQFVTVTVLLAVTLAAVACLALLAYHEQLKARSKVRGCSAPHSPPTQRREKVPLNGGTGEPAAPGGTTEEEEEEEEGSQPCCLQLDGDIDADNNRLRVPMGGPA
SIO_010081: SEMA4A
subclass of: SO_0000673
so part of: SEMA4A
location: complement(join(90614..91236,91323..91435,92068..92228,92305..92420,92517..92706,92919..93069,93142..93308,93758..93888,93972..94088,94184..94292,94603..94701,94790..94852,94926..95086,95988..96114))
location: region:90614-96114:-1
so has part: feature:95988-96114:-1:exon
so has part: feature:94926-95086:-1:exon
so has part: feature:94790-94852:-1:exon
so has part: feature:94603-94701:-1:exon
so has part: feature:94184-94292:-1:exon
so has part: feature:93972-94088:-1:exon
so has part: feature:93758-93888:-1:exon
so has part: feature:93142-93308:-1:exon
so has part: feature:92919-93069:-1:exon
so has part: feature:92517-92706:-1:exon
so has part: feature:92305-92420:-1:exon
so has part: feature:92068-92228:-1:exon
so has part: feature:91323-91435:-1:exon
so has part: feature:90614-91236:-1:exon

XP_030329704.1
type: Protein
SIO_000068: ncbiprotein

position:96114:-1
position: 96114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95988-96114:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94926-95086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94790-94852:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94603-94701:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94184-94292:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:93972-94088:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93758-93888:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:93142-93308:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:92919-93069:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:92517-92706:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:92305-92420:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:92068-92228:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:91323-91435:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:90614-91236:-1:exon

LMNA
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LMNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(101422..119753)
location: region:101422-119753:-1
so has part: feature:101422-119753:-1:exon
subclass of: SO_0000010

115602596
type: Gene
SIO_000068: ncbigene

position:101422:-1
position: 101422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119753:-1
position: 119753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101422-119753:-1:exon

LMNA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LMNA
product: lamin A/C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 long SRA reads, 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030473849.1
SIO_010081: LMNA
subclass of: SO_0000673
so part of: LMNA
location: complement(join(101422..102229,102681..102932,104283..104381,104465..104584,105185..105292,105416..105620,105710..105930,106106..106231,106323..106493,106584..106709,106817..106973,118156..118621,119644..119753))
location: region:101422-119753:-1
so has part: feature:119644-119753:-1:exon
so has part: feature:118156-118621:-1:exon
so has part: feature:106817-106973:-1:exon
so has part: feature:106584-106709:-1:exon
so has part: feature:106323-106493:-1:exon
so has part: feature:106106-106231:-1:exon
so has part: feature:105710-105930:-1:exon
so has part: feature:105416-105620:-1:exon
so has part: feature:105185-105292:-1:exon
so has part: feature:104465-104584:-1:exon
so has part: feature:104283-104381:-1:exon
so has part: feature:102681-102932:-1:exon
so has part: feature:101422-102229:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:119644-119753:-1:exon

position:119644:-1
position: 119644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:118156-118621:-1:exon

position:118156:-1
position: 118156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118621:-1
position: 118621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:106817-106973:-1:exon

position:106817:-1
position: 106817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106973:-1
position: 106973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:106584-106709:-1:exon

position:106584:-1
position: 106584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106709:-1
position: 106709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:106323-106493:-1:exon

position:106323:-1
position: 106323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106493:-1
position: 106493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:106106-106231:-1:exon

position:106106:-1
position: 106106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106231:-1
position: 106231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:105710-105930:-1:exon

position:105710:-1
position: 105710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105930:-1
position: 105930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:105416-105620:-1:exon

position:105416:-1
position: 105416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105620:-1
position: 105620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:105185-105292:-1:exon

position:105185:-1
position: 105185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105292:-1
position: 105292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:104465-104584:-1:exon

position:104465:-1
position: 104465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104584:-1
position: 104584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:104283-104381:-1:exon

position:104283:-1
position: 104283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104381:-1
position: 104381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:102681-102932:-1:exon

position:102681:-1
position: 102681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102932:-1
position: 102932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:101422-102229:-1:exon

position:102229:-1
position: 102229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LMNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LMNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lamin
translation: MATPSQKRSTRSGASGTPLSPTRITRLQEKEDLQELNDRLAVYIDKVRSLELENAGLRLRITESEEVVSREVSGIKAAYESELADARKTLDSVAKERARLQLELSKVREEHKELKARNAKKEGDLLTAQARLKDVEALLNSKEAALSTALGEKRNLENEVRDLRAQVAKLENALGEAKKQLQDEMLRRVDAENRLQTLKEELEFQKNIYSEELRETKRRHETRLVEIDNGRQREFESKLSEALQELRSQHEAQIRLYKEELEKTYGAKLENAKQSAERNSNMVGAAHEELQQTRIRIDNLSSEVSQLQKQLAAKEAKLHDLEDILARERETNRRLLSDKERDMAEMRARMQQQLDEYQELLDIKLALDMEINAYRKLLEGEEERLRLSPSPSSHKGTSRSHLSTPGSSKKRKLEDSESRTSFSHHARTSGRVGVEEVDLEGRFVRLRNKSNEDQAMGNWQIKRQNGDDPPITYRFPPKFTLKAGQVVTIWASGAGATHSPPSNVVWKAQSSWGSGDSLRTALINSNGEEVAMRKLVRTVIINDDDEDEDDDEVNIHHRHHHGSCGGPGDPGEYNLRSRTVVCGTCGQPADKGGNQNVATMSSGSSTSSVTVTRSYRSMGDSGSIGLGETLVTRNYLLGDSSPRRQAQAVQNCSIM
SIO_010081: LMNA
subclass of: SO_0000673
so part of: LMNA
location: complement(join(102197..102229,102681..102932,104283..104381,104465..104584,105185..105292,105416..105620,105710..105930,106106..106231,106323..106493,106584..106709,106817..106973,118156..118505))
location: region:102197-118505:-1
so has part: feature:118156-118505:-1:exon
so has part: feature:106817-106973:-1:exon
so has part: feature:106584-106709:-1:exon
so has part: feature:106323-106493:-1:exon
so has part: feature:106106-106231:-1:exon
so has part: feature:105710-105930:-1:exon
so has part: feature:105416-105620:-1:exon
so has part: feature:105185-105292:-1:exon
so has part: feature:104465-104584:-1:exon
so has part: feature:104283-104381:-1:exon
so has part: feature:102681-102932:-1:exon
so has part: feature:102197-102229:-1:exon

XP_030329709.1
type: Protein
SIO_000068: ncbiprotein

position:102197:-1
position: 102197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118505:-1
position: 118505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118156-118505:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106817-106973:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:106584-106709:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:106323-106493:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:106106-106231:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:105710-105930:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:105416-105620:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:105185-105292:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:104465-104584:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:104283-104381:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:102681-102932:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:102197-102229:-1:exon

MEX3A
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: MEX3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 133265..151401
location: region:133265-151401:1
so has part: feature:133265-151401:1:exon
subclass of: SO_0000010

115602597
type: Gene
SIO_000068: ncbigene

position:133265:1
position: 133265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151401:1
position: 151401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133265-151401:1:exon

MEX3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: MEX3A
product: mex-3 RNA binding family member A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 576 long SRA reads, 10 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030473850.1
SIO_010081: MEX3A
subclass of: SO_0000673
so part of: MEX3A
location: join(133265..134066,144303..151401)
location: region:133265-151401:1
so has part: feature:133265-134066:1:exon
so has part: feature:144303-151401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133265-134066:1:exon

position:134066:1
position: 134066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:144303-151401:1:exon

position:144303:1
position: 144303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MEX3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: MEX3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein MEX3A
translation: MPSLVVPGIMERNGGFGDLGCFGGSGKDRALLEDDRALQLALDQLCLLGLGEPSSSSSSSAVVLVEDSNNNNNNPPPPPPQQPPPPPPPPQQQPPPPPPPPPPSAPKGSSAPSAGAAEPKLCALYKEAELRLKSSSNTTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFMVTGRREDVAMARREIISAAEHFSMIRASRNKAGTTFGSAPTLPGQVTIRVRVPYRVVGLVVGPKGATIKRIQQQTNTYIITPSRDRDPVFEITGAPGNVERAREEIETHIAVRTGKILEYNNENDFLSSSPDSGMENRYSEAWRVHTPAPGCKPLSTFRQNSLGCIGDCSVDPVYETPRLNDQNDFNYGYLFPNYGVNKQDLYYGVPESGAPMWAGQENTNPVSVLFSKQQRSSSTGTIHPNSHRSPSSSIQEPNLSGLPRRSQGEPLQGFSKLGTTTTARTSVSSSRECMVCFESEVTAALVPCGHNLFCMECAVRICERTDPECPVCHAAATQAIRIFS
SIO_010081: MEX3A
subclass of: SO_0000673
so part of: MEX3A
location: join(133595..134066,144303..145408)
location: region:133595-145408:1
so has part: feature:133595-134066:1:exon
so has part: feature:144303-145408:1:exon

XP_030329710.1
type: Protein
SIO_000068: ncbiprotein

position:133595:1
position: 133595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145408:1
position: 145408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133595-134066:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:144303-145408:1:exon

LOC115602598
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115602598
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(155881..159672)
location: region:155881-159672:-1
so has part: feature:155881-159672:-1:exon
subclass of: SO_0000010

115602598
type: Gene
SIO_000068: ncbigene

position:155881:-1
position: 155881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159672:-1
position: 159672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155881-159672:-1:exon

LOC115602598
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115602598
product: ras-related protein Rab-11A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 160 long SRA reads, 106 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030473851.1
SIO_010081: LOC115602598
subclass of: SO_0000673
so part of: LOC115602598
location: complement(join(155881..157689,157868..157948,158036..158229,158305..158500,159559..159672))
location: region:155881-159672:-1
so has part: feature:159559-159672:-1:exon
so has part: feature:158305-158500:-1:exon
so has part: feature:158036-158229:-1:exon
so has part: feature:157868-157948:-1:exon
so has part: feature:155881-157689:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:159559-159672:-1:exon

position:159559:-1
position: 159559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:158305-158500:-1:exon

position:158305:-1
position: 158305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158500:-1
position: 158500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:158036-158229:-1:exon

position:158036:-1
position: 158036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158229:-1
position: 158229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:157868-157948:-1:exon

position:157868:-1
position: 157868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157948:-1
position: 157948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:155881-157689:-1:exon

position:157689:-1
position: 157689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115602598
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115602598
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-11A-like
translation: MRGKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKYLTYENAERWLKELQDHADANIVIMLVGNKSDLRHLRAVPTDEARSFAEKNGLSFLETSALDSTNVETAFHNILTEIYRIVSQRQIPGQPEPEFGPSTTIEPIRVLPTQQEGRQGPCCQNI
SIO_010081: LOC115602598
subclass of: SO_0000673
so part of: LOC115602598
location: complement(join(157550..157689,157868..157948,158036..158229,158305..158500,159559..159598))
location: region:157550-159598:-1
so has part: feature:159559-159598:-1:exon
so has part: feature:158305-158500:-1:exon
so has part: feature:158036-158229:-1:exon
so has part: feature:157868-157948:-1:exon
so has part: feature:157550-157689:-1:exon

XP_030329711.1
type: Protein
SIO_000068: ncbiprotein

position:157550:-1
position: 157550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159598:-1
position: 159598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159559-159598:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158305-158500:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158036-158229:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:157868-157948:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:157550-157689:-1:exon

RAB25
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: RAB25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(160819..164189)
location: region:160819-164189:-1
so has part: feature:160819-164189:-1:exon
subclass of: SO_0000010

115602599
type: Gene
SIO_000068: ncbigene

position:160819:-1
position: 160819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164189:-1
position: 164189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160819-164189:-1:exon

RAB25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: RAB25
product: RAB25, member RAS oncogene family, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 long SRA reads, 60 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030473852.1
SIO_010081: RAB25
subclass of: SO_0000673
so part of: RAB25
location: complement(join(160819..161337,161537..162107,162261..162454,162562..162757,163838..164189))
location: region:160819-164189:-1
so has part: feature:163838-164189:-1:exon
so has part: feature:162562-162757:-1:exon
so has part: feature:162261-162454:-1:exon
so has part: feature:161537-162107:-1:exon
so has part: feature:160819-161337:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:163838-164189:-1:exon

position:163838:-1
position: 163838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:162562-162757:-1:exon

position:162562:-1
position: 162562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162757:-1
position: 162757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:162261-162454:-1:exon

position:162261:-1
position: 162261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162454:-1
position: 162454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:161537-162107:-1:exon

position:161537:-1
position: 161537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162107:-1
position: 162107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:160819-161337:-1:exon

position:161337:-1
position: 161337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAB25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: RAB25
product: RAB25, member RAS oncogene family, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 long SRA reads, 72 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030473853.1
SIO_010081: RAB25
subclass of: SO_0000673
so part of: RAB25
location: complement(join(160819..161337,162027..162107,162261..162454,162562..162757,163838..164183))
location: region:160819-164183:-1
so has part: feature:163838-164183:-1:exon
so has part: feature:162562-162757:-1:exon
so has part: feature:162261-162454:-1:exon
so has part: feature:162027-162107:-1:exon
so has part: feature:160819-161337:-1:exon

position:164183:-1
position: 164183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163838-164183:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:162562-162757:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:162261-162454:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162027-162107:-1:exon

position:162027:-1
position: 162027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:160819-161337:-1:exon

RAB25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: RAB25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-25 isoform X2
translation: MGSAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRSILVGDAVVKAQIWDTAGLERYRAITSAYYRGAVGALVVFDITKHQTYDVVERWLKELYDHAEPSIVVMLVGNKTDLAQAREVPTEEARMFADNNGLLFVETSALDSTNVEQAFETILKEIFHKVQQQKQRNSQSNTVALASGSPDGAATAQEEKRPCCVAI
SIO_010081: RAB25
subclass of: SO_0000673
so part of: RAB25
location: complement(join(161207..161337,162027..162107,162261..162454,162562..162757,163838..163877))
location: region:161207-163877:-1
so has part: feature:163838-163877:-1:exon
so has part: feature:162562-162757:-1:exon
so has part: feature:162261-162454:-1:exon
so has part: feature:162027-162107:-1:exon
so has part: feature:161207-161337:-1:exon

XP_030329713.1
type: Protein
SIO_000068: ncbiprotein

position:161207:-1
position: 161207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163877:-1
position: 163877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163838-163877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:162562-162757:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:162261-162454:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162027-162107:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:161207-161337:-1:exon

RAB25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: RAB25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-25 isoform X1
translation: MGSAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRSILVGDAVVKAQIWDTAGLERYRAITSAYYRGAVGALVVFDITKHQTYDVVERWLKELYDHAEPSIVVMLVGNKTDLAQAREVPTEEARMFADNNGLLFVETSALDSTNVEQAFETILKGTCISTVLQQGPGDQNIGGPSLGLCTGLLLHLAPRQLFGAGFWSFWLVWFHVLRLGVSLPAPSALFSRPLGHSAFPGGGGGAPSSPVISGFPSCCPGLLTQRLQHAAELAVGRWGHRDGAGAMLIQEHLSMHSSQQHCGRRAVRCAVPRRAKLPPQHGVKH
SIO_010081: RAB25
subclass of: SO_0000673
so part of: RAB25
location: complement(join(161542..162107,162261..162454,162562..162757,163838..163877))
location: region:161542-163877:-1
so has part: feature:163838-163877:-1:exon
so has part: feature:162562-162757:-1:exon
so has part: feature:162261-162454:-1:exon
so has part: feature:161542-162107:-1:exon

XP_030329712.1
type: Protein
SIO_000068: ncbiprotein

position:161542:-1
position: 161542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163838-163877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:162562-162757:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:162261-162454:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:161542-162107:-1:exon

LAMTOR2
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LAMTOR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(164438..166445)
location: region:164438-166445:-1
so has part: feature:164438-166445:-1:exon
subclass of: SO_0000010

115602600
type: Gene
SIO_000068: ncbigene

position:164438:-1
position: 164438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166445:-1
position: 166445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164438-166445:-1:exon

LAMTOR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LAMTOR2
product: late endosomal/lysosomal adaptor, MAPK and MTOR activator 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 1550 long SRA reads, 17 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030473854.1
SIO_010081: LAMTOR2
subclass of: SO_0000673
so part of: LAMTOR2
location: complement(join(164438..164641,165164..165253,165369..165531,166283..166445))
location: region:164438-166445:-1
so has part: feature:166283-166445:-1:exon
so has part: feature:165369-165531:-1:exon
so has part: feature:165164-165253:-1:exon
so has part: feature:164438-164641:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:166283-166445:-1:exon

position:166283:-1
position: 166283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:165369-165531:-1:exon

position:165369:-1
position: 165369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165531:-1
position: 165531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:165164-165253:-1:exon

position:165164:-1
position: 165164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165253:-1
position: 165253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:164438-164641:-1:exon

position:164641:-1
position: 164641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LAMTOR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LAMTOR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ragulator complex protein LAMTOR2
translation: MLRPKALTQVLSQANTGGVQSTLLLNNEGSLLAYSGYGDTDARVTAAIASNIWVAYDKNGHQAFNEDNLKFILMDCMEGRVAITRVANLLLCMYAKETVGFGMLKAKAQALVQYLEEPLTQVAAS
SIO_010081: LAMTOR2
subclass of: SO_0000673
so part of: LAMTOR2
location: complement(join(164585..164641,165164..165253,165369..165531,166283..166350))
location: region:164585-166350:-1
so has part: feature:166283-166350:-1:exon
so has part: feature:165369-165531:-1:exon
so has part: feature:165164-165253:-1:exon
so has part: feature:164585-164641:-1:exon

XP_030329714.1
type: Protein
SIO_000068: ncbiprotein

position:164585:-1
position: 164585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166350:-1
position: 166350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166283-166350:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:165369-165531:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:165164-165253:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:164585-164641:-1:exon

UBQLN4
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: UBQLN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 167405..179809
location: region:167405-179809:1
so has part: feature:167405-179809:1:exon
subclass of: SO_0000010

115602601
type: Gene
SIO_000068: ncbigene

position:167405:1
position: 167405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179809:1
position: 179809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167405-179809:1:exon

UBQLN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: UBQLN4
product: ubiquilin 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 317 long SRA reads, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030473856.1
SIO_010081: UBQLN4
subclass of: SO_0000673
so part of: UBQLN4
location: join(167405..167644,169207..169358,171583..171788,172106..172368,173575..173733,174655..174880,175256..175395,176528..176643,177527..177704,178624..179809)
location: region:167405-179809:1
so has part: feature:167405-167644:1:exon
so has part: feature:169207-169358:1:exon
so has part: feature:171583-171788:1:exon
so has part: feature:172106-172368:1:exon
so has part: feature:173575-173733:1:exon
so has part: feature:174655-174880:1:exon
so has part: feature:175256-175395:1:exon
so has part: feature:176528-176643:1:exon
so has part: feature:177527-177704:1:exon
so has part: feature:178624-179809:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:167405-167644:1:exon

position:167644:1
position: 167644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:169207-169358:1:exon

position:169207:1
position: 169207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169358:1
position: 169358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:171583-171788:1:exon

position:171583:1
position: 171583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171788:1
position: 171788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:172106-172368:1:exon

position:172106:1
position: 172106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172368:1
position: 172368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:173575-173733:1:exon

position:173575:1
position: 173575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173733:1
position: 173733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:174655-174880:1:exon

position:174655:1
position: 174655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174880:1
position: 174880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:175256-175395:1:exon

position:175256:1
position: 175256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175395:1
position: 175395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:176528-176643:1:exon

position:176528:1
position: 176528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176643:1
position: 176643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:177527-177704:1:exon

position:177527:1
position: 177527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177704:1
position: 177704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:178624-179809:1:exon

position:178624:1
position: 178624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBQLN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: UBQLN4
product: ubiquilin 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 21 ESTs, 358 long SRA reads, 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030473855.1
SIO_010081: UBQLN4
subclass of: SO_0000673
so part of: UBQLN4
location: join(167439..167644,169207..169358,171583..171788,172106..172368,173575..173733,174655..174880,175256..175395,175823..175906,176528..176643,177527..177704,178624..179809)
location: region:167439-179809:1
so has part: feature:167439-167644:1:exon
so has part: feature:169207-169358:1:exon
so has part: feature:171583-171788:1:exon
so has part: feature:172106-172368:1:exon
so has part: feature:173575-173733:1:exon
so has part: feature:174655-174880:1:exon
so has part: feature:175256-175395:1:exon
so has part: feature:175823-175906:1:exon
so has part: feature:176528-176643:1:exon
so has part: feature:177527-177704:1:exon
so has part: feature:178624-179809:1:exon

position:167439:1
position: 167439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167439-167644:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169207-169358:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171583-171788:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:172106-172368:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:173575-173733:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174655-174880:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:175256-175395:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:175823-175906:1:exon

position:175823:1
position: 175823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175906:1
position: 175906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:176528-176643:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:177527-177704:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:178624-179809:1:exon

UBQLN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: UBQLN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquilin-4 isoform X1
translation: MAEPSGGGGGGGGGPGPGGEGEAGPGGALIRVTVKTPKDKEEIVIADGASVREFKEEISRRFKAKQDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTPQKVQDSTSAASAPSAASAPSATPSSPAAPSQPSTSSSAGSDAGSGSRRSSGSGTMGGPGDGGPNSAPSILSGFGGITGLGNLGMGSANFMELQQQMQRQLMSNPEMLSQIMENPLVQNMMSNPDLMRQMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQFGNNPFSSLTGNSESSSSQPLRTENREPLPNPWSPTPPASQSQAPSSEGSTGSAATQSTPTVSNPFGLNAASIGAGMFNSPEMQGLLQQISENPQLMQNMISAPYMRSMMQTLAQNPDFAAQIMVNVPLFAGNPQLQEQLRLQLPVFLQQMQNPDSLSILTNPRAMQALLQIQQGLQTLQTEAPGLVPSLGSFGMPRMPPSSTGGSTIPENPVPSASTPASASPAGGGNPQQQLMQQMIQLLAGGSSQAQSPEVRFQQQLEQLNAMGFINREANLQALIATGGDINAAIERLLGSQPS
SIO_010081: UBQLN4
subclass of: SO_0000673
so part of: UBQLN4
location: join(167486..167644,169207..169358,171583..171788,172106..172368,173575..173733,174655..174880,175256..175395,175823..175906,176528..176643,177527..177704,178624..178776)
location: region:167486-178776:1
so has part: feature:167486-167644:1:exon
so has part: feature:169207-169358:1:exon
so has part: feature:171583-171788:1:exon
so has part: feature:172106-172368:1:exon
so has part: feature:173575-173733:1:exon
so has part: feature:174655-174880:1:exon
so has part: feature:175256-175395:1:exon
so has part: feature:175823-175906:1:exon
so has part: feature:176528-176643:1:exon
so has part: feature:177527-177704:1:exon
so has part: feature:178624-178776:1:exon

XP_030329715.1
type: Protein
SIO_000068: ncbiprotein

position:167486:1
position: 167486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178776:1
position: 178776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167486-167644:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169207-169358:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171583-171788:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:172106-172368:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:173575-173733:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174655-174880:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:175256-175395:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:175823-175906:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:176528-176643:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:177527-177704:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:178624-178776:1:exon

UBQLN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: UBQLN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquilin-4 isoform X2
translation: MAEPSGGGGGGGGGPGPGGEGEAGPGGALIRVTVKTPKDKEEIVIADGASVREFKEEISRRFKAKQDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTPQKVQDSTSAASAPSAASAPSATPSSPAAPSQPSTSSSAGSDAGSGSRRSSGSGTMGGPGDGGPNSAPSILSGFGGITGLGNLGMGSANFMELQQQMQRQLMSNPEMLSQIMENPLVQNMMSNPDLMRQMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQFGNNPFSSLTGNSESSSSQPLRTENREPLPNPWSPTPPASQSQAPSSEGSTGSAATQSTPTVSNPFGLNAASIGAGMFNSPEMQGLLQQISENPQLMQNMISAPYMRSMMQTLAQNPDFAAQMQNPDSLSILTNPRAMQALLQIQQGLQTLQTEAPGLVPSLGSFGMPRMPPSSTGGSTIPENPVPSASTPASASPAGGGNPQQQLMQQMIQLLAGGSSQAQSPEVRFQQQLEQLNAMGFINREANLQALIATGGDINAAIERLLGSQPS
SIO_010081: UBQLN4
subclass of: SO_0000673
so part of: UBQLN4
location: join(167486..167644,169207..169358,171583..171788,172106..172368,173575..173733,174655..174880,175256..175395,176528..176643,177527..177704,178624..178776)
location: region:167486-178776:1
so has part: feature:167486-167644:1:exon
so has part: feature:169207-169358:1:exon
so has part: feature:171583-171788:1:exon
so has part: feature:172106-172368:1:exon
so has part: feature:173575-173733:1:exon
so has part: feature:174655-174880:1:exon
so has part: feature:175256-175395:1:exon
so has part: feature:176528-176643:1:exon
so has part: feature:177527-177704:1:exon
so has part: feature:178624-178776:1:exon

XP_030329716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167486-167644:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169207-169358:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171583-171788:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:172106-172368:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:173575-173733:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174655-174880:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:175256-175395:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:176528-176643:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:177527-177704:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:178624-178776:1:exon

GPATCH4
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: GPATCH4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 181819..183934
location: region:181819-183934:1
so has part: feature:181819-183934:1:exon
subclass of: SO_0000010

115602603
type: Gene
SIO_000068: ncbigene

position:181819:1
position: 181819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183934:1
position: 183934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181819-183934:1:exon

GPATCH4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: GPATCH4
product: G-patch domain containing 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 165 long SRA reads, 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030473857.1
SIO_010081: GPATCH4
subclass of: SO_0000673
so part of: GPATCH4
location: join(181819..181995,182167..182240,182323..182415,182514..182621,182758..182849,182944..182994,183103..183934)
location: region:181819-183934:1
so has part: feature:181819-181995:1:exon
so has part: feature:182167-182240:1:exon
so has part: feature:182323-182415:1:exon
so has part: feature:182514-182621:1:exon
so has part: feature:182758-182849:1:exon
so has part: feature:182944-182994:1:exon
so has part: feature:183103-183934:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:181819-181995:1:exon

position:181995:1
position: 181995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:182167-182240:1:exon

position:182167:1
position: 182167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182240:1
position: 182240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:182323-182415:1:exon

position:182323:1
position: 182323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182415:1
position: 182415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:182514-182621:1:exon

position:182514:1
position: 182514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182621:1
position: 182621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:182758-182849:1:exon

position:182758:1
position: 182758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182849:1
position: 182849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:182944-182994:1:exon

position:182944:1
position: 182944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182994:1
position: 182994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:183103-183934:1:exon

position:183103:1
position: 183103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPATCH4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: GPATCH4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 4
translation: MSAPGPPGRGLLFAESQLRRHGWRRGQGLGRREHGIAEAIRVKVKCGTAGVGHDASEPFSFHWWDHVFNQAAANIAVETGQDGISVKTLSEQGVRISNKKPRKASSTPSLLYGRFVKSATLTAHGEEPTGSVSSEEEEEELDLSSARRLTDDELMRVCGGRTAHKGARHGLTMSAKLARLEEQERAFLATYGQKEPPERQGKKRKRKESRDGASAEVLQSQEPSEEEEGDKGEAAKRKKKQQKPHGEEEVAGEEGKAARRKKQEQQEEDKEESVEMEKKKRKKQEDKEESIEMEKKKKKKKKQAKEPAEPEVPLEDTDVPDQTRHSPRKKKRRRKKDPE
SIO_010081: GPATCH4
subclass of: SO_0000673
so part of: GPATCH4
location: join(181920..181995,182167..182240,182323..182415,182514..182621,182758..182849,182944..182994,183103..183628)
location: region:181920-183628:1
so has part: feature:181920-181995:1:exon
so has part: feature:182167-182240:1:exon
so has part: feature:182323-182415:1:exon
so has part: feature:182514-182621:1:exon
so has part: feature:182758-182849:1:exon
so has part: feature:182944-182994:1:exon
so has part: feature:183103-183628:1:exon

XP_030329717.1
type: Protein
SIO_000068: ncbiprotein

position:181920:1
position: 181920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183628:1
position: 183628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181920-181995:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182167-182240:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:182323-182415:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:182514-182621:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:182758-182849:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:182944-182994:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:183103-183628:1:exon

NAXE
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: NAXE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(183897..186187)
location: region:183897-186187:-1
so has part: feature:183897-186187:-1:exon
subclass of: SO_0000010

115602604
type: Gene
SIO_000068: ncbigene

position:183897:-1
position: 183897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186187:-1
position: 186187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183897-186187:-1:exon

NAXE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: NAXE
product: NAD(P)HX epimerase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 328 long SRA reads, 10 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030473858.1
SIO_010081: NAXE
subclass of: SO_0000673
so part of: NAXE
location: complement(join(183897..184361,184452..184599,185112..185225,185328..185438,185513..185621,185938..186187))
location: region:183897-186187:-1
so has part: feature:185938-186187:-1:exon
so has part: feature:185513-185621:-1:exon
so has part: feature:185328-185438:-1:exon
so has part: feature:185112-185225:-1:exon
so has part: feature:184452-184599:-1:exon
so has part: feature:183897-184361:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:185938-186187:-1:exon

position:185938:-1
position: 185938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:185513-185621:-1:exon

position:185513:-1
position: 185513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185621:-1
position: 185621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:185328-185438:-1:exon

position:185328:-1
position: 185328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185438:-1
position: 185438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:185112-185225:-1:exon

position:185112:-1
position: 185112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185225:-1
position: 185225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:184452-184599:-1:exon

position:184452:-1
position: 184452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184599:-1
position: 184599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:183897-184361:-1:exon

position:184361:-1
position: 184361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NAXE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: NAXE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD(P)H-hydrate epimerase
translation: MPGPRALLGLGLLVAAGGVRAGGRCLNRGWGWSRGWERAPWCGSYRAMHGPSAGPGPRGLRFLGQDEAQAIDQELFTEYKFSVDQLMELAGLSCATAIAKVYPPSSFTTSRPTVLVVCGPGNNGGDGLVCARHLKMFGYEPTVYYPKRPNKPLFEGLTTQCQKMDIPFLPEFPAEPALIDEVYGLVVDAIFGFSFKGAVREPFGSILSTLGHITVPIASIDIPSGWDVEKGKADGLQPDMLISLTAPKKSALHFEGRFHFLGGRFVPPALQEKYALNLPPYPGTDCVLQLT
SIO_010081: NAXE
subclass of: SO_0000673
so part of: NAXE
location: complement(join(184159..184361,184452..184599,185112..185225,185328..185438,185513..185621,185938..186128))
location: region:184159-186128:-1
so has part: feature:185938-186128:-1:exon
so has part: feature:185513-185621:-1:exon
so has part: feature:185328-185438:-1:exon
so has part: feature:185112-185225:-1:exon
so has part: feature:184452-184599:-1:exon
so has part: feature:184159-184361:-1:exon

XP_030329718.1
type: Protein
SIO_000068: ncbiprotein

position:184159:-1
position: 184159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186128:-1
position: 186128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185938-186128:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:185513-185621:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:185328-185438:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:185112-185225:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:184452-184599:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:184159-184361:-1:exon

TTC24
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: TTC24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(186309..188755)
location: region:186309-188755:-1
so has part: feature:186309-188755:-1:exon
subclass of: SO_0000010

115602486
type: Gene
SIO_000068: ncbigene

position:186309:-1
position: 186309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188755:-1
position: 188755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186309-188755:-1:exon

TTC24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: TTC24
product: tetratricopeptide repeat domain 24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 77% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030473665.1
SIO_010081: TTC24
subclass of: SO_0000673
so part of: TTC24
location: complement(join(186309..186459,186540..186613,186740..186832,186924..187045,187192..187320,187400..187603,187681..188445,188550..188755))
location: region:186309-188755:-1
so has part: feature:188550-188755:-1:exon
so has part: feature:187681-188445:-1:exon
so has part: feature:187400-187603:-1:exon
so has part: feature:187192-187320:-1:exon
so has part: feature:186924-187045:-1:exon
so has part: feature:186740-186832:-1:exon
so has part: feature:186540-186613:-1:exon
so has part: feature:186309-186459:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:188550-188755:-1:exon

position:188550:-1
position: 188550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:187681-188445:-1:exon

position:187681:-1
position: 187681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188445:-1
position: 188445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:187400-187603:-1:exon

position:187400:-1
position: 187400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187603:-1
position: 187603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:187192-187320:-1:exon

position:187192:-1
position: 187192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187320:-1
position: 187320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:186924-187045:-1:exon

position:186924:-1
position: 186924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187045:-1
position: 187045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:186740-186832:-1:exon

position:186740:-1
position: 186740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186832:-1
position: 186832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:186540-186613:-1:exon

position:186540:-1
position: 186540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186613:-1
position: 186613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:186309-186459:-1:exon

position:186459:-1
position: 186459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TTC24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: TTC24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 24
translation: MASEEAANPGTHPATPAIPKKSLKKAKEKPEAGADAQEGRDEMVEREARIEGLTRAGRRALVLGDGQEAVGCFRKAFVLSGSMVSPQLRSACAFNLGAAYVETGKPKKGLKFLLQSQTSLGGSGEPSQDLYFSIEAAHKGLQDFPKALEHFGIAADGDSAAQAGSRARTRVRMGCCYLGMREPARAARCFLDAARCFAAAASPEAAAVALSRASSSMLQSRGFGVAEIAAVLAQCHSLCGSICDAALRGKLYGDIGLSYSQLHIFTLAAESFERALASEPEQHRAAALLQNMGAAHNALCSFGTALGWHRRAAALHGTLGNRRAQGQCFGNLAYACSQLGNHEAAAENYLHALQAFQDSGDVQGQWQACEGLGAAYFHLGDPHKAIGHYKEALTLLSHRQDTPRAAHERVVHKLTDAIQHQLCLQGHLSCRQDPGQLQLQPTQPRASRTQLRGSRMHPTHPVNASVASLPPSPTDQRPRGSREPRSGTREPRSGSRTLSLLCSLL
SIO_010081: TTC24
subclass of: SO_0000673
so part of: TTC24
location: complement(join(186309..186459,186540..186613,186740..186832,186924..187045,187192..187320,187400..187603,187681..188425))
location: region:186309-188425:-1
so has part: feature:187681-188425:-1:exon
so has part: feature:187400-187603:-1:exon
so has part: feature:187192-187320:-1:exon
so has part: feature:186924-187045:-1:exon
so has part: feature:186740-186832:-1:exon
so has part: feature:186540-186613:-1:exon
so has part: feature:186309-186459:-1:exon

XP_030329525.1
type: Protein
SIO_000068: ncbiprotein

position:188425:-1
position: 188425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187681-188425:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:187400-187603:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:187192-187320:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:186924-187045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:186740-186832:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186540-186613:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:186309-186459:-1:exon

IQGAP3
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: IQGAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 189624..205697
location: region:189624-205697:1
so has part: feature:189624-205697:1:exon
subclass of: SO_0000010

115602605
type: Gene
SIO_000068: ncbigene

position:189624:1
position: 189624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205697:1
position: 205697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189624-205697:1:exon

IQGAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: IQGAP3
product: IQ motif containing GTPase activating protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 long SRA reads, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030473860.2
SIO_010081: IQGAP3
subclass of: SO_0000673
so part of: IQGAP3
location: join(189624..189697,190005..190092,190424..190580,190752..190829,190954..191030,191186..191253,191456..191569,191872..192050,192295..192382,193136..193299,193462..193549,193665..193828,194225..194385,194596..194720,194857..195020,195555..195645,195730..195897,195996..196138,196212..196382,196977..197060,197195..197266,197886..197955,198305..198513,198690..198842,198937..199100,199292..199516,199608..199748,200217..200301,200538..200770,201111..201243,201880..201982,202125..202269,202413..202500,202757..202969,203244..203410,203539..203640,204008..204116,204348..205697)
location: region:189624-205697:1
so has part: feature:189624-189697:1:exon
so has part: feature:190005-190092:1:exon
so has part: feature:190424-190580:1:exon
so has part: feature:190752-190829:1:exon
so has part: feature:190954-191030:1:exon
so has part: feature:191186-191253:1:exon
so has part: feature:191456-191569:1:exon
so has part: feature:191872-192050:1:exon
so has part: feature:192295-192382:1:exon
so has part: feature:193136-193299:1:exon
so has part: feature:193462-193549:1:exon
so has part: feature:193665-193828:1:exon
so has part: feature:194225-194385:1:exon
so has part: feature:194596-194720:1:exon
so has part: feature:194857-195020:1:exon
so has part: feature:195555-195645:1:exon
so has part: feature:195730-195897:1:exon
so has part: feature:195996-196138:1:exon
so has part: feature:196212-196382:1:exon
so has part: feature:196977-197060:1:exon
so has part: feature:197195-197266:1:exon
so has part: feature:197886-197955:1:exon
so has part: feature:198305-198513:1:exon
so has part: feature:198690-198842:1:exon
so has part: feature:198937-199100:1:exon
so has part: feature:199292-199516:1:exon
so has part: feature:199608-199748:1:exon
so has part: feature:200217-200301:1:exon
so has part: feature:200538-200770:1:exon
so has part: feature:201111-201243:1:exon
so has part: feature:201880-201982:1:exon
so has part: feature:202125-202269:1:exon
so has part: feature:202413-202500:1:exon
so has part: feature:202757-202969:1:exon
so has part: feature:203244-203410:1:exon
so has part: feature:203539-203640:1:exon
so has part: feature:204008-204116:1:exon
so has part: feature:204348-205697:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:189624-189697:1:exon

position:189697:1
position: 189697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:190005-190092:1:exon

position:190005:1
position: 190005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190092:1
position: 190092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:190424-190580:1:exon

position:190424:1
position: 190424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190580:1
position: 190580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:190752-190829:1:exon

position:190752:1
position: 190752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190829:1
position: 190829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:190954-191030:1:exon

position:190954:1
position: 190954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191030:1
position: 191030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:191186-191253:1:exon

position:191186:1
position: 191186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191253:1
position: 191253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:191456-191569:1:exon

position:191456:1
position: 191456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191569:1
position: 191569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:191872-192050:1:exon

position:191872:1
position: 191872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192050:1
position: 192050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:192295-192382:1:exon

position:192295:1
position: 192295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192382:1
position: 192382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:193136-193299:1:exon

position:193136:1
position: 193136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193299:1
position: 193299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:193462-193549:1:exon

position:193462:1
position: 193462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193549:1
position: 193549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:193665-193828:1:exon

position:193665:1
position: 193665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193828:1
position: 193828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:194225-194385:1:exon

position:194225:1
position: 194225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194385:1
position: 194385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:194596-194720:1:exon

position:194596:1
position: 194596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194720:1
position: 194720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:194857-195020:1:exon

position:194857:1
position: 194857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195020:1
position: 195020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:195555-195645:1:exon

position:195555:1
position: 195555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195645:1
position: 195645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:195730-195897:1:exon

position:195730:1
position: 195730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195897:1
position: 195897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:195996-196138:1:exon

position:195996:1
position: 195996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196138:1
position: 196138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:196212-196382:1:exon

position:196212:1
position: 196212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196382:1
position: 196382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:196977-197060:1:exon

position:196977:1
position: 196977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197060:1
position: 197060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:197195-197266:1:exon

position:197195:1
position: 197195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197266:1
position: 197266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:197886-197955:1:exon

position:197886:1
position: 197886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197955:1
position: 197955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:198305-198513:1:exon

position:198305:1
position: 198305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198513:1
position: 198513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:198690-198842:1:exon

position:198690:1
position: 198690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198842:1
position: 198842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:198937-199100:1:exon

position:198937:1
position: 198937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199100:1
position: 199100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:199292-199516:1:exon

position:199292:1
position: 199292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199516:1
position: 199516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:199608-199748:1:exon

position:199608:1
position: 199608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199748:1
position: 199748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:200217-200301:1:exon

position:200217:1
position: 200217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200301:1
position: 200301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:200538-200770:1:exon

position:200538:1
position: 200538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200770:1
position: 200770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:201111-201243:1:exon

position:201111:1
position: 201111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201243:1
position: 201243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:201880-201982:1:exon

position:201880:1
position: 201880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201982:1
position: 201982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:202125-202269:1:exon

position:202125:1
position: 202125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202269:1
position: 202269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:202413-202500:1:exon

position:202413:1
position: 202413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202500:1
position: 202500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:202757-202969:1:exon

position:202757:1
position: 202757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202969:1
position: 202969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:203244-203410:1:exon

position:203244:1
position: 203244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203410:1
position: 203410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:203539-203640:1:exon

position:203539:1
position: 203539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203640:1
position: 203640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:204008-204116:1:exon

position:204008:1
position: 204008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204116:1
position: 204116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:204348-205697:1:exon

position:204348:1
position: 204348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IQGAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: IQGAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating-like protein IQGAP3
translation: MEGAGPVRCERLTAEEMDEKRRQNIAYQYLCHLEEAKRWLEACLSEELPPPVELEETLRNGVVLAKLGHCFAPTVVPLKKIYDREQTRYKAAGLHFRHTDNINYWRDAMSHVGLPSIFHPETTDIYDKKNMPRVVYCIHALSLYLFKLGLAPQIQDLYGKVDFTEEEINNMKRELEKYGLQLPAFSKIGGILANELSVDEAAVHAAVLAINRAVEQGVVAQTMGALRNPSAMLLGLRQELAGAYQEVLHRAKLEKGSNVRNRLLQVIPEGEDIYDHCLTQAEIQGNINKVNVHGALEEVDDALEQQDVLALYRALQDPVLALRCLQRDNLQRYLEQLSMDREQKALELGYVDLLEQEELEAGILTANRKGEEERAMLGAISRINAAIRHGKPAETLEALMDPAAQLPDVYPLAAPLYQHQLALLQSQHPRGELVQEELFVAVEMLSAVALVNRALDAGDPDGLWSSLVSAALGLAGVEDANAQRYFEDLLQLKGQCRAAGAEFLSWNNIQDSVNATNSSVQDENDRITAVRLINEALLQEDPEKTLSALLLQAAALPHITIPTAQRYHHVLAQARRMKAQATGDDGAVLWWEEIQEGVCKANEDTVAARRMALGIAAINQAIKEGKATQTLRVLLNPAVALCGVVGACAAGYQEQLAALMATKKQTGSTKPCWIQHRLADGAEFYLSLQSFEGSWQRPPDGGINTTHLSREEIQAVVTRVTAAHDRERLWAANVAFVVRLQARLRGFLVRQELAARRSILREQRPAAIRIQACWRGYKQRRAYLERLRYLRANADAAIKIQAGVRMWQARRRYQERLRYFRHNVEAVIKIQAFVRAHKARGDYRMLVHARSPPLSVVRRFIHLLEQSQQDFWEESEVLRLQEEVVKRIRANRQLESDLDLMDIKIGLLVKNRITLQEVVCHCKKLTKKNKEQLSEMMSIDKQKGLKSLSKEKRQKLEAYQHLFYLLQTQPVYLARLIFQMPQNKSTKFMESVIFTLYNYASTPREAFLLLQLFKAALQEEISSKVDHVHDILLGNATVIRMVVSFYRNARGQNALRHILGGPVQQVLQDKTLSIRTNPVDIYKAWINQTESQSGQKSKLPYEVSPEQALSYPEVQRRLDISIRNLLVVTDKFVSAITSSVDKIPYGMRYMAKILRTSLAEKFPKASAEDIDKVVGNLLYYRYMNPAVVAPDGFDIVELSAGVTLHPEQRRSLGSIAKVLQHAAAHKPFDGDNAHLCGVNQYLEETHHRFRRFISAACSVPEPEERFNMDEYSEMVAVAKPVIYITVGELINTHKLLLEHQDSIAPQHGDPLHDLLEDLEELPTLQFLVGENVASPVDTSAEQMLSQLSKMEMSLTLTGKLVPVASSEESDTRSLLLSTKQMLVDVIQSQPGDSLPEILWTRASECEEASHAHLMHRRALRDAQTPAKLQRNRSLAANSQLPMEEKKRKIIRNLRRLESLGLVDSAHQYQELINELAKDIWNQRRYRQHRKGELLKLRQTLHGLNAKTLFYEEQIDYYNQYIKTCLDNLAASTKVSGKNKKLQSLHYTAARLFEKGVLLEIEDLPHSQFRNVIFDIIPCEESGRFQVKAKFMGIDMERFQLHYQNLLQLQYEGVAVMKMFDKAKVNVNLLIFLLNKKFFKK
SIO_010081: IQGAP3
subclass of: SO_0000673
so part of: IQGAP3
location: join(189673..189697,190005..190092,190424..190580,190752..190829,190954..191030,191186..191253,191456..191569,191872..192050,192295..192382,193136..193299,193462..193549,193665..193828,194225..194385,194596..194720,194857..195020,195555..195645,195730..195897,195996..196138,196212..196382,196977..197060,197195..197266,197886..197955,198305..198513,198690..198842,198937..199100,199292..199516,199608..199748,200217..200301,200538..200770,201111..201243,201880..201982,202125..202269,202413..202500,202757..202969,203244..203410,203539..203640,204008..204116,204348..204461)
location: region:189673-204461:1
so has part: feature:189673-189697:1:exon
so has part: feature:190005-190092:1:exon
so has part: feature:190424-190580:1:exon
so has part: feature:190752-190829:1:exon
so has part: feature:190954-191030:1:exon
so has part: feature:191186-191253:1:exon
so has part: feature:191456-191569:1:exon
so has part: feature:191872-192050:1:exon
so has part: feature:192295-192382:1:exon
so has part: feature:193136-193299:1:exon
so has part: feature:193462-193549:1:exon
so has part: feature:193665-193828:1:exon
so has part: feature:194225-194385:1:exon
so has part: feature:194596-194720:1:exon
so has part: feature:194857-195020:1:exon
so has part: feature:195555-195645:1:exon
so has part: feature:195730-195897:1:exon
so has part: feature:195996-196138:1:exon
so has part: feature:196212-196382:1:exon
so has part: feature:196977-197060:1:exon
so has part: feature:197195-197266:1:exon
so has part: feature:197886-197955:1:exon
so has part: feature:198305-198513:1:exon
so has part: feature:198690-198842:1:exon
so has part: feature:198937-199100:1:exon
so has part: feature:199292-199516:1:exon
so has part: feature:199608-199748:1:exon
so has part: feature:200217-200301:1:exon
so has part: feature:200538-200770:1:exon
so has part: feature:201111-201243:1:exon
so has part: feature:201880-201982:1:exon
so has part: feature:202125-202269:1:exon
so has part: feature:202413-202500:1:exon
so has part: feature:202757-202969:1:exon
so has part: feature:203244-203410:1:exon
so has part: feature:203539-203640:1:exon
so has part: feature:204008-204116:1:exon
so has part: feature:204348-204461:1:exon

XP_030329720.1
type: Protein
SIO_000068: ncbiprotein

position:189673:1
position: 189673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204461:1
position: 204461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189673-189697:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:190005-190092:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:190424-190580:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:190752-190829:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:190954-191030:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191186-191253:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191456-191569:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191872-192050:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:192295-192382:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:193136-193299:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:193462-193549:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:193665-193828:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:194225-194385:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:194596-194720:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:194857-195020:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:195555-195645:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:195730-195897:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:195996-196138:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:196212-196382:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:196977-197060:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:197195-197266:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:197886-197955:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:198305-198513:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:198690-198842:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:198937-199100:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:199292-199516:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:199608-199748:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:200217-200301:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:200538-200770:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:201111-201243:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:201880-201982:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:202125-202269:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:202413-202500:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:202757-202969:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:203244-203410:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:203539-203640:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:204008-204116:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:204348-204461:1:exon

MEF2D
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 207219..297162
location: region:207219-297162:1
so has part: feature:207219-297162:1:exon
subclass of: SO_0000010

115602606
type: Gene
SIO_000068: ncbigene

position:207219:1
position: 207219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297162:1
position: 297162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207219-297162:1:exon

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 278 long SRA reads, 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030473863.1
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(207219..207605,245676..245745,261033..261310,265918..266121,270940..271077,274964..275174,277771..277827,280998..281188,281892..281912,285320..285449,287777..288020,289380..297162)
location: region:207219-297162:1
so has part: feature:207219-207605:1:exon
so has part: feature:245676-245745:1:exon
so has part: feature:261033-261310:1:exon
so has part: feature:265918-266121:1:exon
so has part: feature:270940-271077:1:exon
so has part: feature:274964-275174:1:exon
so has part: feature:277771-277827:1:exon
so has part: feature:280998-281188:1:exon
so has part: feature:281892-281912:1:exon
so has part: feature:285320-285449:1:exon
so has part: feature:287777-288020:1:exon
so has part: feature:289380-297162:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:207219-207605:1:exon

position:207605:1
position: 207605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:245676-245745:1:exon

position:245676:1
position: 245676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245745:1
position: 245745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:261033-261310:1:exon

position:261033:1
position: 261033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261310:1
position: 261310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:265918-266121:1:exon

position:265918:1
position: 265918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266121:1
position: 266121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:270940-271077:1:exon

position:270940:1
position: 270940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271077:1
position: 271077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:274964-275174:1:exon

position:274964:1
position: 274964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275174:1
position: 275174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:277771-277827:1:exon

position:277771:1
position: 277771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277827:1
position: 277827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:280998-281188:1:exon

position:280998:1
position: 280998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281188:1
position: 281188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:281892-281912:1:exon

position:281892:1
position: 281892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281912:1
position: 281912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:285320-285449:1:exon

position:285320:1
position: 285320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285449:1
position: 285449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:287777-288020:1:exon

position:287777:1
position: 287777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288020:1
position: 288020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:289380-297162:1:exon

position:289380:1
position: 289380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 279 long SRA reads, 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030473861.1
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(224779..224860,245676..245745,261033..261310,265918..266121,270940..271077,274964..275174,277771..277827,280998..281188,281892..281912,285320..285449,287777..288020,289380..297162)
location: region:224779-297162:1
so has part: feature:224779-224860:1:exon
so has part: feature:245676-245745:1:exon
so has part: feature:261033-261310:1:exon
so has part: feature:265918-266121:1:exon
so has part: feature:270940-271077:1:exon
so has part: feature:274964-275174:1:exon
so has part: feature:277771-277827:1:exon
so has part: feature:280998-281188:1:exon
so has part: feature:281892-281912:1:exon
so has part: feature:285320-285449:1:exon
so has part: feature:287777-288020:1:exon
so has part: feature:289380-297162:1:exon

position:224779:1
position: 224779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224779-224860:1:exon

position:224860:1
position: 224860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:245676-245745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:261033-261310:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:265918-266121:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:270940-271077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:274964-275174:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277771-277827:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280998-281188:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:281892-281912:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:285320-285449:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:287777-288020:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:289380-297162:1:exon

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs, 276 long SRA reads, 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030473867.1
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(224779..224860,245676..245745,261033..261310,265918..266121,270940..271077,274964..275174,277771..277827,280998..281188,281892..281912,285323..285449,287777..288020,289380..297162)
location: region:224779-297162:1
so has part: feature:224779-224860:1:exon
so has part: feature:245676-245745:1:exon
so has part: feature:261033-261310:1:exon
so has part: feature:265918-266121:1:exon
so has part: feature:270940-271077:1:exon
so has part: feature:274964-275174:1:exon
so has part: feature:277771-277827:1:exon
so has part: feature:280998-281188:1:exon
so has part: feature:281892-281912:1:exon
so has part: feature:285323-285449:1:exon
so has part: feature:287777-288020:1:exon
so has part: feature:289380-297162:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:224779-224860:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245676-245745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:261033-261310:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:265918-266121:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:270940-271077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:274964-275174:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277771-277827:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280998-281188:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:281892-281912:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:285323-285449:1:exon

position:285323:1
position: 285323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:287777-288020:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:289380-297162:1:exon

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 275 long SRA reads, 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030473868.1
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(224779..224860,245676..245745,261033..261310,265918..266121,270940..271077,274964..275174,277771..277827,280998..281188,285320..285449,287777..288020,289380..297162)
location: region:224779-297162:1
so has part: feature:224779-224860:1:exon
so has part: feature:245676-245745:1:exon
so has part: feature:261033-261310:1:exon
so has part: feature:265918-266121:1:exon
so has part: feature:270940-271077:1:exon
so has part: feature:274964-275174:1:exon
so has part: feature:277771-277827:1:exon
so has part: feature:280998-281188:1:exon
so has part: feature:285320-285449:1:exon
so has part: feature:287777-288020:1:exon
so has part: feature:289380-297162:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:224779-224860:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245676-245745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:261033-261310:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:265918-266121:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:270940-271077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:274964-275174:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277771-277827:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280998-281188:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:285320-285449:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:287777-288020:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:289380-297162:1:exon

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 278 long SRA reads, 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030473870.1
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(224779..224860,245676..245745,261033..261310,265918..266121,270940..271077,274964..275174,277771..277827,280998..281188,285323..285449,287777..288020,289380..297162)
location: region:224779-297162:1
so has part: feature:224779-224860:1:exon
so has part: feature:245676-245745:1:exon
so has part: feature:261033-261310:1:exon
so has part: feature:265918-266121:1:exon
so has part: feature:270940-271077:1:exon
so has part: feature:274964-275174:1:exon
so has part: feature:277771-277827:1:exon
so has part: feature:280998-281188:1:exon
so has part: feature:285323-285449:1:exon
so has part: feature:287777-288020:1:exon
so has part: feature:289380-297162:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:224779-224860:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245676-245745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:261033-261310:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:265918-266121:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:270940-271077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:274964-275174:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277771-277827:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280998-281188:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:285323-285449:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:287777-288020:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:289380-297162:1:exon

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 278 long SRA reads, 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030473862.2
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(225158..225269,245676..245745,261033..261310,265918..266121,270940..271077,274964..275174,277771..277827,280998..281188,281892..281912,285320..285449,287777..288020,289380..297162)
location: region:225158-297162:1
so has part: feature:225158-225269:1:exon
so has part: feature:245676-245745:1:exon
so has part: feature:261033-261310:1:exon
so has part: feature:265918-266121:1:exon
so has part: feature:270940-271077:1:exon
so has part: feature:274964-275174:1:exon
so has part: feature:277771-277827:1:exon
so has part: feature:280998-281188:1:exon
so has part: feature:281892-281912:1:exon
so has part: feature:285320-285449:1:exon
so has part: feature:287777-288020:1:exon
so has part: feature:289380-297162:1:exon

position:225158:1
position: 225158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225158-225269:1:exon

position:225269:1
position: 225269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:245676-245745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:261033-261310:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:265918-266121:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:270940-271077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:274964-275174:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277771-277827:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280998-281188:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:281892-281912:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:285320-285449:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:287777-288020:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:289380-297162:1:exon

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 276 long SRA reads, 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030473865.1
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(232411..232433,245676..245745,261033..261310,265918..266121,270940..271077,274964..275174,277771..277827,280998..281188,281892..281912,285320..285449,287777..288020,289380..297162)
location: region:232411-297162:1
so has part: feature:232411-232433:1:exon
so has part: feature:245676-245745:1:exon
so has part: feature:261033-261310:1:exon
so has part: feature:265918-266121:1:exon
so has part: feature:270940-271077:1:exon
so has part: feature:274964-275174:1:exon
so has part: feature:277771-277827:1:exon
so has part: feature:280998-281188:1:exon
so has part: feature:281892-281912:1:exon
so has part: feature:285320-285449:1:exon
so has part: feature:287777-288020:1:exon
so has part: feature:289380-297162:1:exon

position:232411:1
position: 232411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232411-232433:1:exon

position:232433:1
position: 232433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:245676-245745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:261033-261310:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:265918-266121:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:270940-271077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:274964-275174:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277771-277827:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280998-281188:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:281892-281912:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:285320-285449:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:287777-288020:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:289380-297162:1:exon

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 276 long SRA reads, 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030473864.1
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(235149..235170,245676..245745,261033..261310,265918..266121,270940..271077,274964..275174,277771..277827,280998..281188,281892..281912,285320..285449,287777..288020,289380..297162)
location: region:235149-297162:1
so has part: feature:235149-235170:1:exon
so has part: feature:245676-245745:1:exon
so has part: feature:261033-261310:1:exon
so has part: feature:265918-266121:1:exon
so has part: feature:270940-271077:1:exon
so has part: feature:274964-275174:1:exon
so has part: feature:277771-277827:1:exon
so has part: feature:280998-281188:1:exon
so has part: feature:281892-281912:1:exon
so has part: feature:285320-285449:1:exon
so has part: feature:287777-288020:1:exon
so has part: feature:289380-297162:1:exon

position:235149:1
position: 235149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235149-235170:1:exon

position:235170:1
position: 235170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:245676-245745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:261033-261310:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:265918-266121:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:270940-271077:1:exon

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SIO_000300: 6
SIO_000628: feature:274964-275174:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277771-277827:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280998-281188:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:281892-281912:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:285320-285449:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:287777-288020:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:289380-297162:1:exon

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 282 long SRA reads, 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030473866.1
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(248414..248526,261033..261310,265918..266121,270940..271077,274964..275174,277771..277827,280998..281188,281892..281912,285320..285449,287777..288020,289380..297162)
location: region:248414-297162:1
so has part: feature:248414-248526:1:exon
so has part: feature:261033-261310:1:exon
so has part: feature:265918-266121:1:exon
so has part: feature:270940-271077:1:exon
so has part: feature:274964-275174:1:exon
so has part: feature:277771-277827:1:exon
so has part: feature:280998-281188:1:exon
so has part: feature:281892-281912:1:exon
so has part: feature:285320-285449:1:exon
so has part: feature:287777-288020:1:exon
so has part: feature:289380-297162:1:exon

position:248414:1
position: 248414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248414-248526:1:exon

position:248526:1
position: 248526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:261033-261310:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:265918-266121:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270940-271077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:274964-275174:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:277771-277827:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280998-281188:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:281892-281912:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:285320-285449:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:287777-288020:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:289380-297162:1:exon

MEF2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X1
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKGSEDLDILFKRYGSAVPAPNFAMPVTVPVTNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLSPQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNGSSLGKIIPAKSPPPPSHSTQLATNSRKPDLRVITSQSGKGLMHHLTEDHLALQNTQRLGVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLPSAELSSLPAFSSPSGLSLGNISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQPQQHLVPVSLGNLIQGSHLSHTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSSYEGSSERDDPARPDFGSSLGLLRPTSEPEGESPSVKRMRLDTWVT
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(261257..261310,265918..266121,270940..271077,274964..275174,277771..277827,280998..281188,281892..281912,285320..285449,287777..288020,289380..289710)
location: region:261257-289710:1
so has part: feature:261257-261310:1:exon
so has part: feature:265918-266121:1:exon
so has part: feature:270940-271077:1:exon
so has part: feature:274964-275174:1:exon
so has part: feature:277771-277827:1:exon
so has part: feature:280998-281188:1:exon
so has part: feature:281892-281912:1:exon
so has part: feature:285320-285449:1:exon
so has part: feature:287777-288020:1:exon
so has part: feature:289380-289710:1:exon

XP_030329721.1
type: Protein
SIO_000068: ncbiprotein

position:261257:1
position: 261257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289710:1
position: 289710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261257-261310:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:265918-266121:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270940-271077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274964-275174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277771-277827:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280998-281188:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281892-281912:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285320-285449:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:287777-288020:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:289380-289710:1:exon

MEF2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X1
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKGSEDLDILFKRYGSAVPAPNFAMPVTVPVTNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLSPQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNGSSLGKIIPAKSPPPPSHSTQLATNSRKPDLRVITSQSGKGLMHHLTEDHLALQNTQRLGVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLPSAELSSLPAFSSPSGLSLGNISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQPQQHLVPVSLGNLIQGSHLSHTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSSYEGSSERDDPARPDFGSSLGLLRPTSEPEGESPSVKRMRLDTWVT
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(261257..261310,265918..266121,270940..271077,274964..275174,277771..277827,280998..281188,281892..281912,285320..285449,287777..288020,289380..289710)
location: region:261257-289710:1
so has part: feature:261257-261310:1:exon
so has part: feature:265918-266121:1:exon
so has part: feature:270940-271077:1:exon
so has part: feature:274964-275174:1:exon
so has part: feature:277771-277827:1:exon
so has part: feature:280998-281188:1:exon
so has part: feature:281892-281912:1:exon
so has part: feature:285320-285449:1:exon
so has part: feature:287777-288020:1:exon
so has part: feature:289380-289710:1:exon

XP_030329722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261257-261310:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:265918-266121:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270940-271077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274964-275174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277771-277827:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280998-281188:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281892-281912:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285320-285449:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:287777-288020:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:289380-289710:1:exon

MEF2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X1
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKGSEDLDILFKRYGSAVPAPNFAMPVTVPVTNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLSPQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNGSSLGKIIPAKSPPPPSHSTQLATNSRKPDLRVITSQSGKGLMHHLTEDHLALQNTQRLGVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLPSAELSSLPAFSSPSGLSLGNISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQPQQHLVPVSLGNLIQGSHLSHTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSSYEGSSERDDPARPDFGSSLGLLRPTSEPEGESPSVKRMRLDTWVT
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(261257..261310,265918..266121,270940..271077,274964..275174,277771..277827,280998..281188,281892..281912,285320..285449,287777..288020,289380..289710)
location: region:261257-289710:1
so has part: feature:261257-261310:1:exon
so has part: feature:265918-266121:1:exon
so has part: feature:270940-271077:1:exon
so has part: feature:274964-275174:1:exon
so has part: feature:277771-277827:1:exon
so has part: feature:280998-281188:1:exon
so has part: feature:281892-281912:1:exon
so has part: feature:285320-285449:1:exon
so has part: feature:287777-288020:1:exon
so has part: feature:289380-289710:1:exon

XP_030329723.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261257-261310:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:265918-266121:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270940-271077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274964-275174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277771-277827:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280998-281188:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281892-281912:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285320-285449:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:287777-288020:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:289380-289710:1:exon

MEF2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X1
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKGSEDLDILFKRYGSAVPAPNFAMPVTVPVTNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLSPQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNGSSLGKIIPAKSPPPPSHSTQLATNSRKPDLRVITSQSGKGLMHHLTEDHLALQNTQRLGVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLPSAELSSLPAFSSPSGLSLGNISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQPQQHLVPVSLGNLIQGSHLSHTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSSYEGSSERDDPARPDFGSSLGLLRPTSEPEGESPSVKRMRLDTWVT
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(261257..261310,265918..266121,270940..271077,274964..275174,277771..277827,280998..281188,281892..281912,285320..285449,287777..288020,289380..289710)
location: region:261257-289710:1
so has part: feature:261257-261310:1:exon
so has part: feature:265918-266121:1:exon
so has part: feature:270940-271077:1:exon
so has part: feature:274964-275174:1:exon
so has part: feature:277771-277827:1:exon
so has part: feature:280998-281188:1:exon
so has part: feature:281892-281912:1:exon
so has part: feature:285320-285449:1:exon
so has part: feature:287777-288020:1:exon
so has part: feature:289380-289710:1:exon

XP_030329724.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261257-261310:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:265918-266121:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270940-271077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274964-275174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277771-277827:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280998-281188:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281892-281912:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285320-285449:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:287777-288020:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:289380-289710:1:exon

MEF2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X1
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKGSEDLDILFKRYGSAVPAPNFAMPVTVPVTNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLSPQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNGSSLGKIIPAKSPPPPSHSTQLATNSRKPDLRVITSQSGKGLMHHLTEDHLALQNTQRLGVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLPSAELSSLPAFSSPSGLSLGNISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQPQQHLVPVSLGNLIQGSHLSHTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSSYEGSSERDDPARPDFGSSLGLLRPTSEPEGESPSVKRMRLDTWVT
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(261257..261310,265918..266121,270940..271077,274964..275174,277771..277827,280998..281188,281892..281912,285320..285449,287777..288020,289380..289710)
location: region:261257-289710:1
so has part: feature:261257-261310:1:exon
so has part: feature:265918-266121:1:exon
so has part: feature:270940-271077:1:exon
so has part: feature:274964-275174:1:exon
so has part: feature:277771-277827:1:exon
so has part: feature:280998-281188:1:exon
so has part: feature:281892-281912:1:exon
so has part: feature:285320-285449:1:exon
so has part: feature:287777-288020:1:exon
so has part: feature:289380-289710:1:exon

XP_030329725.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261257-261310:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:265918-266121:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270940-271077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274964-275174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277771-277827:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280998-281188:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281892-281912:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285320-285449:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:287777-288020:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:289380-289710:1:exon

MEF2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X1
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKGSEDLDILFKRYGSAVPAPNFAMPVTVPVTNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLSPQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNGSSLGKIIPAKSPPPPSHSTQLATNSRKPDLRVITSQSGKGLMHHLTEDHLALQNTQRLGVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLPSAELSSLPAFSSPSGLSLGNISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQPQQHLVPVSLGNLIQGSHLSHTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSSYEGSSERDDPARPDFGSSLGLLRPTSEPEGESPSVKRMRLDTWVT
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(261257..261310,265918..266121,270940..271077,274964..275174,277771..277827,280998..281188,281892..281912,285320..285449,287777..288020,289380..289710)
location: region:261257-289710:1
so has part: feature:261257-261310:1:exon
so has part: feature:265918-266121:1:exon
so has part: feature:270940-271077:1:exon
so has part: feature:274964-275174:1:exon
so has part: feature:277771-277827:1:exon
so has part: feature:280998-281188:1:exon
so has part: feature:281892-281912:1:exon
so has part: feature:285320-285449:1:exon
so has part: feature:287777-288020:1:exon
so has part: feature:289380-289710:1:exon

XP_030329726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261257-261310:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:265918-266121:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270940-271077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274964-275174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277771-277827:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280998-281188:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281892-281912:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285320-285449:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:287777-288020:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:289380-289710:1:exon

MEF2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X2
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKGSEDLDILFKRYGSAVPAPNFAMPVTVPVTNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLSPQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNGSSLGKIIPAKSPPPPSHSTQLATNSRKPDLRVITSQSGKGLMHHLTEDHLALNTQRLGVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLPSAELSSLPAFSSPSGLSLGNISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQPQQHLVPVSLGNLIQGSHLSHTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSSYEGSSERDDPARPDFGSSLGLLRPTSEPEGESPSVKRMRLDTWVT
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(261257..261310,265918..266121,270940..271077,274964..275174,277771..277827,280998..281188,281892..281912,285323..285449,287777..288020,289380..289710)
location: region:261257-289710:1
so has part: feature:261257-261310:1:exon
so has part: feature:265918-266121:1:exon
so has part: feature:270940-271077:1:exon
so has part: feature:274964-275174:1:exon
so has part: feature:277771-277827:1:exon
so has part: feature:280998-281188:1:exon
so has part: feature:281892-281912:1:exon
so has part: feature:285323-285449:1:exon
so has part: feature:287777-288020:1:exon
so has part: feature:289380-289710:1:exon

XP_030329727.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261257-261310:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:265918-266121:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270940-271077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274964-275174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277771-277827:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280998-281188:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281892-281912:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285323-285449:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:287777-288020:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:289380-289710:1:exon

MEF2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X3
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKGSEDLDILFKRYGSAVPAPNFAMPVTVPVTNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLSPQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNGSSLGKIIPAKSPPPPSHSTQLATNSRKPDLRVITSQSGKGLMHHLQNTQRLGVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLPSAELSSLPAFSSPSGLSLGNISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQPQQHLVPVSLGNLIQGSHLSHTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSSYEGSSERDDPARPDFGSSLGLLRPTSEPEGESPSVKRMRLDTWVT
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(261257..261310,265918..266121,270940..271077,274964..275174,277771..277827,280998..281188,285320..285449,287777..288020,289380..289710)
location: region:261257-289710:1
so has part: feature:261257-261310:1:exon
so has part: feature:265918-266121:1:exon
so has part: feature:270940-271077:1:exon
so has part: feature:274964-275174:1:exon
so has part: feature:277771-277827:1:exon
so has part: feature:280998-281188:1:exon
so has part: feature:285320-285449:1:exon
so has part: feature:287777-288020:1:exon
so has part: feature:289380-289710:1:exon

XP_030329728.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261257-261310:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:265918-266121:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270940-271077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274964-275174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277771-277827:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280998-281188:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285320-285449:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:287777-288020:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:289380-289710:1:exon

MEF2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X4
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKGSEDLDILFKRYGSAVPAPNFAMPVTVPVTNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLSPQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNGSSLGKIIPAKSPPPPSHSTQLATNSRKPDLRVITSQSGKGLMHHLNTQRLGVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLPSAELSSLPAFSSPSGLSLGNISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQPQQHLVPVSLGNLIQGSHLSHTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSSYEGSSERDDPARPDFGSSLGLLRPTSEPEGESPSVKRMRLDTWVT
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(261257..261310,265918..266121,270940..271077,274964..275174,277771..277827,280998..281188,285323..285449,287777..288020,289380..289710)
location: region:261257-289710:1
so has part: feature:261257-261310:1:exon
so has part: feature:265918-266121:1:exon
so has part: feature:270940-271077:1:exon
so has part: feature:274964-275174:1:exon
so has part: feature:277771-277827:1:exon
so has part: feature:280998-281188:1:exon
so has part: feature:285323-285449:1:exon
so has part: feature:287777-288020:1:exon
so has part: feature:289380-289710:1:exon

XP_030329730.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261257-261310:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:265918-266121:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270940-271077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274964-275174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277771-277827:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280998-281188:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285323-285449:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:287777-288020:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:289380-289710:1:exon

LOC115602718
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115602718
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 304689..333786
location: region:304689-333786:1
so has part: feature:304689-333786:1:exon
subclass of: SO_0000011

115602718
type: Gene
SIO_000068: ncbigene

position:304689:1
position: 304689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333786:1
position: 333786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304689-333786:1:exon

LOC115602718
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2489341
nc RNA class: lncRNA
gene: LOC115602718
product: uncharacterized LOC115602718, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 299 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003989701.1
SIO_010081: LOC115602718
subclass of: SO_0000673
so part of: LOC115602718
location: join(304689..304703,306721..306983,315355..315511,320524..320568,325406..325501,325947..326257,333402..333786)
location: region:304689-333786:1
so has part: feature:304689-304703:1:exon
so has part: feature:306721-306983:1:exon
so has part: feature:315355-315511:1:exon
so has part: feature:320524-320568:1:exon
so has part: feature:325406-325501:1:exon
so has part: feature:325947-326257:1:exon
so has part: feature:333402-333786:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:304689-304703:1:exon

position:304703:1
position: 304703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:306721-306983:1:exon

position:306721:1
position: 306721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306983:1
position: 306983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:315355-315511:1:exon

position:315355:1
position: 315355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315511:1
position: 315511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:320524-320568:1:exon

position:320524:1
position: 320524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320568:1
position: 320568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:325406-325501:1:exon

position:325406:1
position: 325406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325501:1
position: 325501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:325947-326257:1:exon

position:325947:1
position: 325947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326257:1
position: 326257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:333402-333786:1:exon

position:333402:1
position: 333402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115602718
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2489341
nc RNA class: lncRNA
gene: LOC115602718
product: uncharacterized LOC115602718, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 377 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003989704.2
SIO_010081: LOC115602718
subclass of: SO_0000673
so part of: LOC115602718
location: join(306219..306983,320524..320568,325406..325501,325947..326257,333402..333786)
location: region:306219-333786:1
so has part: feature:306219-306983:1:exon
so has part: feature:320524-320568:1:exon
so has part: feature:325406-325501:1:exon
so has part: feature:325947-326257:1:exon
so has part: feature:333402-333786:1:exon

position:306219:1
position: 306219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306219-306983:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:320524-320568:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:325406-325501:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:325947-326257:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:333402-333786:1:exon

LOC115602718
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2489341
nc RNA class: lncRNA
gene: LOC115602718
product: uncharacterized LOC115602718, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 307 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003989699.1
SIO_010081: LOC115602718
subclass of: SO_0000673
so part of: LOC115602718
location: join(306262..306983,315355..315511,320524..320568,325406..325501,325947..326257,333402..333786)
location: region:306262-333786:1
so has part: feature:306262-306983:1:exon
so has part: feature:315355-315511:1:exon
so has part: feature:320524-320568:1:exon
so has part: feature:325406-325501:1:exon
so has part: feature:325947-326257:1:exon
so has part: feature:333402-333786:1:exon

position:306262:1
position: 306262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306262-306983:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:315355-315511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:320524-320568:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:325406-325501:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:325947-326257:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:333402-333786:1:exon

LOC115602718
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2489341
nc RNA class: lncRNA
gene: LOC115602718
product: uncharacterized LOC115602718, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 305 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003989702.1
SIO_010081: LOC115602718
subclass of: SO_0000673
so part of: LOC115602718
location: join(310267..310344,315355..315511,320524..320568,325406..325501,325947..326257,333402..333786)
location: region:310267-333786:1
so has part: feature:310267-310344:1:exon
so has part: feature:315355-315511:1:exon
so has part: feature:320524-320568:1:exon
so has part: feature:325406-325501:1:exon
so has part: feature:325947-326257:1:exon
so has part: feature:333402-333786:1:exon

position:310267:1
position: 310267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310267-310344:1:exon

position:310344:1
position: 310344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:315355-315511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:320524-320568:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:325406-325501:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:325947-326257:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:333402-333786:1:exon

LOC115602718
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2489341
nc RNA class: lncRNA
gene: LOC115602718
product: uncharacterized LOC115602718, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 317 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003989706.1
SIO_010081: LOC115602718
subclass of: SO_0000673
so part of: LOC115602718
location: join(310297..310344,320524..320568,325406..325501,325947..326257,333402..333786)
location: region:310297-333786:1
so has part: feature:310297-310344:1:exon
so has part: feature:320524-320568:1:exon
so has part: feature:325406-325501:1:exon
so has part: feature:325947-326257:1:exon
so has part: feature:333402-333786:1:exon

position:310297:1
position: 310297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310297-310344:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:320524-320568:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:325406-325501:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:325947-326257:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:333402-333786:1:exon

LOC115602718
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2489341
nc RNA class: lncRNA
gene: LOC115602718
product: uncharacterized LOC115602718, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 351 long SRA reads, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003989705.1
SIO_010081: LOC115602718
subclass of: SO_0000673
so part of: LOC115602718
location: join(311645..311920,320524..320568,325406..325501,325947..326257,333402..333786)
location: region:311645-333786:1
so has part: feature:311645-311920:1:exon
so has part: feature:320524-320568:1:exon
so has part: feature:325406-325501:1:exon
so has part: feature:325947-326257:1:exon
so has part: feature:333402-333786:1:exon

position:311645:1
position: 311645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311645-311920:1:exon

position:311920:1
position: 311920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:320524-320568:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:325406-325501:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:325947-326257:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:333402-333786:1:exon

LOC115602718
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2489341
nc RNA class: lncRNA
gene: LOC115602718
product: uncharacterized LOC115602718, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 315 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003989700.1
SIO_010081: LOC115602718
subclass of: SO_0000673
so part of: LOC115602718
location: join(311725..311920,315355..315511,320524..320568,325406..325501,325947..326257,333402..333786)
location: region:311725-333786:1
so has part: feature:311725-311920:1:exon
so has part: feature:315355-315511:1:exon
so has part: feature:320524-320568:1:exon
so has part: feature:325406-325501:1:exon
so has part: feature:325947-326257:1:exon
so has part: feature:333402-333786:1:exon

position:311725:1
position: 311725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311725-311920:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:315355-315511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:320524-320568:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:325406-325501:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:325947-326257:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:333402-333786:1:exon

LOC115602718
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2489341
nc RNA class: lncRNA
gene: LOC115602718
product: uncharacterized LOC115602718, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 398 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003989698.1
SIO_010081: LOC115602718
subclass of: SO_0000673
so part of: LOC115602718
location: join(311818..315511,320524..320568,325406..325501,325947..326257,333402..333786)
location: region:311818-333786:1
so has part: feature:311818-315511:1:exon
so has part: feature:320524-320568:1:exon
so has part: feature:325406-325501:1:exon
so has part: feature:325947-326257:1:exon
so has part: feature:333402-333786:1:exon

position:311818:1
position: 311818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311818-315511:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:320524-320568:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:325406-325501:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:325947-326257:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:333402-333786:1:exon

RHBG
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: RHBG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(363591..369151)
location: region:363591-369151:-1
so has part: feature:363591-369151:-1:exon
subclass of: SO_0000010

115602784
type: Gene
SIO_000068: ncbigene

position:363591:-1
position: 363591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369151:-1
position: 369151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363591-369151:-1:exon

RHBG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: RHBG
product: Rh family B glycoprotein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030474187.1
SIO_010081: RHBG
subclass of: SO_0000673
so part of: RHBG
location: complement(join(363591..364085,364247..364320,364525..364646,365102..365235,365330..365467,365679..365845,366143..366290,366410..366560,366833..367019,368961..369151))
location: region:363591-369151:-1
so has part: feature:368961-369151:-1:exon
so has part: feature:366833-367019:-1:exon
so has part: feature:366410-366560:-1:exon
so has part: feature:366143-366290:-1:exon
so has part: feature:365679-365845:-1:exon
so has part: feature:365330-365467:-1:exon
so has part: feature:365102-365235:-1:exon
so has part: feature:364525-364646:-1:exon
so has part: feature:364247-364320:-1:exon
so has part: feature:363591-364085:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:368961-369151:-1:exon

position:368961:-1
position: 368961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:366833-367019:-1:exon

position:366833:-1
position: 366833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367019:-1
position: 367019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:366410-366560:-1:exon

position:366410:-1
position: 366410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366560:-1
position: 366560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:366143-366290:-1:exon

position:366143:-1
position: 366143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366290:-1
position: 366290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:365679-365845:-1:exon

position:365679:-1
position: 365679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365845:-1
position: 365845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:365330-365467:-1:exon

position:365330:-1
position: 365330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365467:-1
position: 365467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:365102-365235:-1:exon

position:365102:-1
position: 365102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365235:-1
position: 365235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:364525-364646:-1:exon

position:364525:-1
position: 364525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364646:-1
position: 364646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:364247-364320:-1:exon

position:364247:-1
position: 364247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364320:-1
position: 364320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:363591-364085:-1:exon

position:364085:-1
position: 364085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RHBG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: RHBG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ammonium transporter Rh type B
translation: MPEPSVTTRLRLSGLCFLLQILTILLFAAFVRFSPESSPKLCSQPLNCSWRNQDSGFQHHRFRDVHLQALLGFGFLVAFLSRYGPGSVAISILVVAFAIQWAVLLQGFLHQFRNGKIHMGVQSMVRADFCAAATLISTGAVVGRVNPAQMLLLALLGVTLFTLNEHILLGLLGVSDSGGSVTVHTFGAYFGLMVSRILPQLHMDQREEQQDTGHQPDVFAVVGTICLWIFWPSFTSTTTAQGSAEPWAVLNTYFSLAASTMATFILSPILCEESTPRMAQIQDAAVAAVAVMGMAGEMLVTPFGALIAGFLAGLIPPLGFRFLTPVLCSRLKIQDTCGVHNVHGLPGMLGAFLGTLLAALATADAYGGRLELVFPLVARGSRTGTAQALHQLSALPLTLLLATLGGCLTGAVLRIKGLRSAPAPRYPDNTEVKLVDEEGCEHRVSRKGRGTSTLV
SIO_010081: RHBG
subclass of: SO_0000673
so part of: RHBG
location: complement(join(364020..364085,364247..364320,364525..364646,365102..365235,365330..365467,365679..365845,366143..366290,366410..366560,366833..367019,368961..369141))
location: region:364020-369141:-1
so has part: feature:368961-369141:-1:exon
so has part: feature:366833-367019:-1:exon
so has part: feature:366410-366560:-1:exon
so has part: feature:366143-366290:-1:exon
so has part: feature:365679-365845:-1:exon
so has part: feature:365330-365467:-1:exon
so has part: feature:365102-365235:-1:exon
so has part: feature:364525-364646:-1:exon
so has part: feature:364247-364320:-1:exon
so has part: feature:364020-364085:-1:exon

XP_030330047.1
type: Protein
SIO_000068: ncbiprotein

position:364020:-1
position: 364020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369141:-1
position: 369141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368961-369141:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:366833-367019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:366410-366560:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:366143-366290:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:365679-365845:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:365330-365467:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:365102-365235:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:364525-364646:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:364247-364320:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:364020-364085:-1:exon

HAPLN2
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: HAPLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 372028..374567
location: region:372028-374567:1
so has part: feature:372028-374567:1:exon
subclass of: SO_0000010

115602783
type: Gene
SIO_000068: ncbigene

position:372028:1
position: 372028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374567:1
position: 374567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372028-374567:1:exon

HAPLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: HAPLN2
product: hyaluronan and proteoglycan link protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 50% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030474186.1
SIO_010081: HAPLN2
subclass of: SO_0000673
so part of: HAPLN2
location: join(372028..372115,372398..372748,373549..373665,373743..373928,374268..374567)
location: region:372028-374567:1
so has part: feature:372028-372115:1:exon
so has part: feature:372398-372748:1:exon
so has part: feature:373549-373665:1:exon
so has part: feature:373743-373928:1:exon
so has part: feature:374268-374567:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:372028-372115:1:exon

position:372115:1
position: 372115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:372398-372748:1:exon

position:372398:1
position: 372398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372748:1
position: 372748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:373549-373665:1:exon

position:373549:1
position: 373549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373665:1
position: 373665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:373743-373928:1:exon

position:373743:1
position: 373743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373928:1
position: 373928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:374268-374567:1:exon

position:374268:1
position: 374268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HAPLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: HAPLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan and proteoglycan link protein 2
translation: MHQLLLLSSLWLLVVRPALSIFQSPTGTPAPPQLQYLLEPLHSAVHTRRGATATLPCVLRALPRNYRVKWSKVEPANYRESIIIITNGLYHKNYGPLSPRVRLRRSHRYDASLTISHVALEDEGRYRCQLVNGLEDESVSLTLHLEGVVFPYQPSSGRYKLNYQDAKRACEQQDSRLATYQQLYKAWTEGLDWCNAGWILDGTVHYPIINSREPCGGRLLLPGVRSYGARDKQKDRFDAFCFTSALQGQVYFIRGHLNFKEAAQACRNHGAAMAKVGQLYSAWKFSQLDRCDGGWLEDGSVRFPITTPRQHCGGLPHPGVHSFGFPSKDRRIYGTYCFVEE
SIO_010081: HAPLN2
subclass of: SO_0000673
so part of: HAPLN2
location: join(372028..372115,372398..372748,373549..373665,373743..373928,374268..374551)
location: region:372028-374551:1
so has part: feature:372028-372115:1:exon
so has part: feature:372398-372748:1:exon
so has part: feature:373549-373665:1:exon
so has part: feature:373743-373928:1:exon
so has part: feature:374268-374551:1:exon

XP_030330046.1
type: Protein
SIO_000068: ncbiprotein

position:374551:1
position: 374551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372028-372115:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:372398-372748:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:373549-373665:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:373743-373928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:374268-374551:1:exon

BCAN
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: BCAN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(375519..389726)
location: region:375519-389726:-1
so has part: feature:375519-389726:-1:exon
subclass of: SO_0000010

115602782
type: Gene
SIO_000068: ncbigene

position:375519:-1
position: 375519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389726:-1
position: 389726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375519-389726:-1:exon

BCAN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: BCAN
product: brevican
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 109 long SRA reads, 13 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030474185.1
SIO_010081: BCAN
subclass of: SO_0000673
so part of: BCAN
location: complement(join(375519..375738,375826..376008,376222..376366,376634..376716,377335..377493,377671..377778,379605..380357,381142..381384,382410..382703,383402..383529,383618..383792,383903..384298,384410..384502,389475..389726))
location: region:375519-389726:-1
so has part: feature:389475-389726:-1:exon
so has part: feature:384410-384502:-1:exon
so has part: feature:383903-384298:-1:exon
so has part: feature:383618-383792:-1:exon
so has part: feature:383402-383529:-1:exon
so has part: feature:382410-382703:-1:exon
so has part: feature:381142-381384:-1:exon
so has part: feature:379605-380357:-1:exon
so has part: feature:377671-377778:-1:exon
so has part: feature:377335-377493:-1:exon
so has part: feature:376634-376716:-1:exon
so has part: feature:376222-376366:-1:exon
so has part: feature:375826-376008:-1:exon
so has part: feature:375519-375738:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:389475-389726:-1:exon

position:389475:-1
position: 389475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:384410-384502:-1:exon

position:384410:-1
position: 384410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384502:-1
position: 384502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:383903-384298:-1:exon

position:383903:-1
position: 383903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384298:-1
position: 384298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:383618-383792:-1:exon

position:383618:-1
position: 383618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383792:-1
position: 383792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:383402-383529:-1:exon

position:383402:-1
position: 383402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383529:-1
position: 383529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:382410-382703:-1:exon

position:382410:-1
position: 382410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382703:-1
position: 382703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:381142-381384:-1:exon

position:381142:-1
position: 381142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381384:-1
position: 381384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:379605-380357:-1:exon

position:379605:-1
position: 379605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380357:-1
position: 380357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:377671-377778:-1:exon

position:377671:-1
position: 377671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377778:-1
position: 377778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:377335-377493:-1:exon

position:377335:-1
position: 377335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377493:-1
position: 377493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:376634-376716:-1:exon

position:376634:-1
position: 376634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376716:-1
position: 376716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:376222-376366:-1:exon

position:376222:-1
position: 376222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376366:-1
position: 376366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:375826-376008:-1:exon

position:375826:-1
position: 375826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376008:-1
position: 376008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:375519-375738:-1:exon

position:375738:-1
position: 375738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BCAN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: BCAN
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: brevican core protein
translation: MEQGQRMPPALPLLLLWVFAPAVVPEVFGTGDGAEDLKALQVSIPRHPALDAVLAGDITIPCLITYLGPQPTSSSTAGRRAVLGTPRVKWTFISEGREVEILVARGDRVKVSEDYRFRASLPIFHQRYTNASLLLTELRPNDSGIYRCDVQHGIEDGHDILNLRVKGVVFHYREGSMRYAYTFAEAQEACAKIGAHIATPEQLYAAYLGGYEQCDAGWLSDQTVRYPIHTPREACYGDMNGFPGVRNYGVVDPEDMYDVYCYAEDLPGEIFLETAPARFTLQEAAARCRARGAALASTGQLYAAWSAGLDACSPGWLADGSVRYPIVTPRERCGGALPGVKTIFVFRNQTGFPDAQSRYDAYCFREGTNSFPEAPGSSEGLQEIVTVAEKLEELQLPKAQVEIESRGAIYAVPFFMDDDLGQPSPAPEDAPGTGARHPPIDTSMSSEEEQGAAPGSTFEGRDPSQPMEQDGAISLQMLSIAPRVGAEGPTGAPSVLGAAEGDPEPPEGFPRPPSPTHHPEHPRDAVGRSAHTVSPGAPGHRLPSPTSAASATSTDSREHGGTPSGGVSTPVPVAEDVELSGDVVESPGVSPLPAAPVRPQEEGEEPSGALWLPSPVAPADGGTVPAAEVTVVTPWHTEGPGGSSSTTAMGGEEAPPGTDHGMPAASSEEEEEEEEEEPPAPSAATVEGFLAAVPGEPGGCIPNPCLNGGTCTEDDGPVSCLCLPGYGGTSCERPLRQCSPGWDSFQGACYKHFSTRRSWEDAEGQCRHYGGHLATILTPEEQDFINDQYREYQWIGLNDRTIEGDFQWSDGSPLLYENWHHGXPDSYFLSGXNCVVIVWHDGGQWSDVPCNYHLPTTCKMGLVQCGPPPAISNARAFGKPKQRYEIGSTARYRCRPGFLPRRSPLLRCRDDGMWDPPQLICRPGLAQPPGD
SIO_010081: BCAN
subclass of: SO_0000673
so part of: BCAN
location: complement(join(375713..375738,375826..376008,376222..376366,376634..376716,377335..377493,377671..377778,379605..380357,381142..381384,382410..382703,383402..383529,383618..383792,383903..384298,384410..384502,389475..389484))
location: region:375713-389484:-1
so has part: feature:389475-389484:-1:exon
so has part: feature:384410-384502:-1:exon
so has part: feature:383903-384298:-1:exon
so has part: feature:383618-383792:-1:exon
so has part: feature:383402-383529:-1:exon
so has part: feature:382410-382703:-1:exon
so has part: feature:381142-381384:-1:exon
so has part: feature:379605-380357:-1:exon
so has part: feature:377671-377778:-1:exon
so has part: feature:377335-377493:-1:exon
so has part: feature:376634-376716:-1:exon
so has part: feature:376222-376366:-1:exon
so has part: feature:375826-376008:-1:exon
so has part: feature:375713-375738:-1:exon

XP_030330045.1
type: Protein
SIO_000068: ncbiprotein

position:375713:-1
position: 375713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389484:-1
position: 389484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389475-389484:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:384410-384502:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383903-384298:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:383618-383792:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:383402-383529:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:382410-382703:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:381142-381384:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:379605-380357:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:377671-377778:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:377335-377493:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:376634-376716:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:376222-376366:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:375826-376008:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:375713-375738:-1:exon

NES
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: NES
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 394014..400527
location: region:394014-400527:1
so has part: feature:394014-400527:1:exon
subclass of: SO_0000010

115602781
type: Gene
SIO_000068: ncbigene

position:394014:1
position: 394014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400527:1
position: 400527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394014-400527:1:exon

NES
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: NES
product: nestin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 91 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030474184.1
SIO_010081: NES
subclass of: SO_0000673
so part of: NES
location: join(394014..394923,395741..395865,396298..396371,396805..400527)
location: region:394014-400527:1
so has part: feature:394014-394923:1:exon
so has part: feature:395741-395865:1:exon
so has part: feature:396298-396371:1:exon
so has part: feature:396805-400527:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:394014-394923:1:exon

position:394923:1
position: 394923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:395741-395865:1:exon

position:395741:1
position: 395741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395865:1
position: 395865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:396298-396371:1:exon

position:396298:1
position: 396298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396371:1
position: 396371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:396805-400527:1:exon

position:396805:1
position: 396805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NES
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: NES
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nestin
translation: MNSCAPLCSRHSSLPAFPLFQSRGILRHPPAPMLSTESFSGARALGEESLQMWELNKRLEAYLARVKVLEEENEALRAEIQSARSGPAGDQRRVKYEEELRALRDALRDAYSGKCAAELARDSLYEEVQQVRSRCQKEQAAREAAKQQLSVSRKELEEERRAQIWLKESAVRLQKEVEALLEVHEEEKAGLEQDIAGFSQSLESFRCAPVAFQPLEVEDYSKRLSEIWKGAVETYKTEVSQLEGSLCQAKESLWKAVEDNQQSQLQLQRLEKDLAGLKARKEMLEESLSRQWQEQRGEAEKFQLALEALEQEKQTLRVQIAQVLEDRQQLMHLKMSLSLEVATYRTLLEAESTRLQMPTGEYRLANGLRDLKLEGSSSTKLGPEARRMLPREHRASPSPFARAEGRGQPGKAPSDALIPQTPSAGTRELQRVGAAHGAAPRDAPSFPAASPSQPIQLSPEPPSPMLGSPGEGPAWPGGDGDERSRGKEHPPPEAMEKTRSLRYPAQLVSEALEDALKEVKDDAQAKEEPMLSATWAPRDAPSPIPHTEAVAEGGEGQDLSEGDGDGEAPEAEEEVEELVVQGLGVESSTQRDGATSPPCGFAASLSATVSQEEMGEWEEEMPTVRSPREPEVVSQEEDMGGPGQTGTSQEEPEQGEEEVPSMEASHPEEEEEEEEEEEEEEEEERASHIPCGEDGDFQGEGMDEHQEESPPREAEAARAALEESHPALEEDLVDGEQEEPDHQEMPVCETGLEERGQEMCPEQEPSSIRGATPAEEAPLGPEEDAVEGEGQGRAEGEGEEGEASGGVLGGDPWAGPGPLGQESRAQEELQGKDFMEEEREQEQEQGEEPWGRDDDGSSQEPPAEGWEVAAEDTEEALGTDDTPLGAGGLESEGRDGTWLEGTQGEGEEDDEEAEPAPELARDEQDGSMGQPVPTGPPGQGDSQELAEALEEPWEGRDEDVDDAPGSSPAELQQARGMERDGPLEEEDGPLEEEDEDGGSGELEEAAGTGRKVELEDTLPDSTPLHLYGGEMLAVAPSSQTPLEAEDTIEAASEGAPEDEGWLEGSDKPPAPTMVQSHEEEAGTEGAPAAEGAEEEEGYFMVSAPNQEVSSSEEAEISEDFEEIKAEATEGSRDDVEAPGGASPAPDDKGHFEALVGAADEAVRMPTEMPKDEDEEVDGGSSEPEEGPIVPGGDGGAMGPVAGGAAEPAQAAEPAEELDGAVEPDSDAGRAETPPGCSLGLEEDEDEPSVAEPIPPAVLQPQERPVPLPHQAEQHPSDEQPPPMEQEARDGDSPLPAEDKEPPEADPPHAGSGPEQGGSPEVAEEQSDAAEVPLDIPEDPDLLEIVEQALEFNQEVVMGARAAEGKEQGPGGTQDAGEDSSPTSSSEEEPTVQEAPADAAPQAPVRAENGLHRAASLEDLAEFSEEVPNGITGTAPAFPMENTDPAAAVPAPGDATGTKVADASPCGKHGDTVRAEQEPCSMGNE
SIO_010081: NES
subclass of: SO_0000673
so part of: NES
location: join(394015..394923,395741..395865,396298..396371,396805..400151)
location: region:394015-400151:1
so has part: feature:394015-394923:1:exon
so has part: feature:395741-395865:1:exon
so has part: feature:396298-396371:1:exon
so has part: feature:396805-400151:1:exon

XP_030330044.1
type: Protein
SIO_000068: ncbiprotein

position:394015:1
position: 394015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400151:1
position: 400151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394015-394923:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:395741-395865:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:396298-396371:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:396805-400151:1:exon

LOC115602785
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115602785
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 405372..408862
location: region:405372-408862:1
so has part: feature:405372-408862:1:exon
subclass of: SO_0000010

115602785
type: Gene
SIO_000068: ncbigene

position:405372:1
position: 405372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408862:1
position: 408862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405372-408862:1:exon

LOC115602785
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115602785
product: dnaJ homolog subfamily A member 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 33 long SRA reads, 34 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030474188.1
SIO_010081: LOC115602785
subclass of: SO_0000673
so part of: LOC115602785
location: join(405372..405430,405611..405761,405838..406036,406616..406720,406795..407022,407106..407336,407860..407960,408044..408862)
location: region:405372-408862:1
so has part: feature:405372-405430:1:exon
so has part: feature:405611-405761:1:exon
so has part: feature:405838-406036:1:exon
so has part: feature:406616-406720:1:exon
so has part: feature:406795-407022:1:exon
so has part: feature:407106-407336:1:exon
so has part: feature:407860-407960:1:exon
so has part: feature:408044-408862:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:405372-405430:1:exon

position:405430:1
position: 405430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:405611-405761:1:exon

position:405611:1
position: 405611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405761:1
position: 405761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:405838-406036:1:exon

position:405838:1
position: 405838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406036:1
position: 406036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:406616-406720:1:exon

position:406616:1
position: 406616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406720:1
position: 406720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:406795-407022:1:exon

position:406795:1
position: 406795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407022:1
position: 407022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:407106-407336:1:exon

position:407106:1
position: 407106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407336:1
position: 407336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:407860-407960:1:exon

position:407860:1
position: 407860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407960:1
position: 407960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:408044-408862:1:exon

position:408044:1
position: 408044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115602785
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115602785
product: dnaJ homolog subfamily A member 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 31 long SRA reads, 34 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030474189.1
SIO_010081: LOC115602785
subclass of: SO_0000673
so part of: LOC115602785
location: join(405415..405430,405606..405761,405838..406036,406616..406720,406795..407022,407106..407336,407860..407960,408044..408862)
location: region:405415-408862:1
so has part: feature:405415-405430:1:exon
so has part: feature:405606-405761:1:exon
so has part: feature:405838-406036:1:exon
so has part: feature:406616-406720:1:exon
so has part: feature:406795-407022:1:exon
so has part: feature:407106-407336:1:exon
so has part: feature:407860-407960:1:exon
so has part: feature:408044-408862:1:exon

position:405415:1
position: 405415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405415-405430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405606-405761:1:exon

position:405606:1
position: 405606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:405838-406036:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:406616-406720:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:406795-407022:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:407106-407336:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:407860-407960:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:408044-408862:1:exon

LOC115602785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115602785
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily A member 1-like
translation: MVKETGYYDLLGVRPGATLDEIKRAYRRLALRYHPDKNPSEGERFKQISQAYEVLSDTHKRALYDRGGERAMKEGGLGSRGGSAGFGSPMDIFDFFFGGGVRMRGRADRRGKTVVHQLSVSLEDLYNGTTRKLSLQKNIICRKCGGCGVREGAQRRCPKCHGSGMEVRIHQLGPSMIQQIQTVCSQCQGQGEWIRPRDCCLTCNGRKVVREKKILNVHLDKGMKDGQKITFHEEGDQVPGLEPGDIIIVLDQKEHPVFRRSGDDLIVRREISLADALCGCRQVIRTLDNRSLLLASPPGDVIRPGDLKCVPNEGMPVYRSPFQKGKLILQFQVKFPEPGWLPPERLRQLQAFFPPQDEVMATEDTEEVELSDYTAHGGPGGRRPFPGDPPHDDDFEDGTRQHVQCQTS
SIO_010081: LOC115602785
subclass of: SO_0000673
so part of: LOC115602785
location: join(405630..405761,405838..406036,406616..406720,406795..407022,407106..407336,407860..407960,408044..408274)
location: region:405630-408274:1
so has part: feature:405630-405761:1:exon
so has part: feature:405838-406036:1:exon
so has part: feature:406616-406720:1:exon
so has part: feature:406795-407022:1:exon
so has part: feature:407106-407336:1:exon
so has part: feature:407860-407960:1:exon
so has part: feature:408044-408274:1:exon

XP_030330048.1
type: Protein
SIO_000068: ncbiprotein

position:405630:1
position: 405630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408274:1
position: 408274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405630-405761:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405838-406036:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:406616-406720:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:406795-407022:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:407106-407336:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:407860-407960:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:408044-408274:1:exon

LOC115602785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115602785
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily A member 1-like
translation: MVKETGYYDLLGVRPGATLDEIKRAYRRLALRYHPDKNPSEGERFKQISQAYEVLSDTHKRALYDRGGERAMKEGGLGSRGGSAGFGSPMDIFDFFFGGGVRMRGRADRRGKTVVHQLSVSLEDLYNGTTRKLSLQKNIICRKCGGCGVREGAQRRCPKCHGSGMEVRIHQLGPSMIQQIQTVCSQCQGQGEWIRPRDCCLTCNGRKVVREKKILNVHLDKGMKDGQKITFHEEGDQVPGLEPGDIIIVLDQKEHPVFRRSGDDLIVRREISLADALCGCRQVIRTLDNRSLLLASPPGDVIRPGDLKCVPNEGMPVYRSPFQKGKLILQFQVKFPEPGWLPPERLRQLQAFFPPQDEVMATEDTEEVELSDYTAHGGPGGRRPFPGDPPHDDDFEDGTRQHVQCQTS
SIO_010081: LOC115602785
subclass of: SO_0000673
so part of: LOC115602785
location: join(405630..405761,405838..406036,406616..406720,406795..407022,407106..407336,407860..407960,408044..408274)
location: region:405630-408274:1
so has part: feature:405630-405761:1:exon
so has part: feature:405838-406036:1:exon
so has part: feature:406616-406720:1:exon
so has part: feature:406795-407022:1:exon
so has part: feature:407106-407336:1:exon
so has part: feature:407860-407960:1:exon
so has part: feature:408044-408274:1:exon

XP_030330049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:405630-405761:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405838-406036:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:406616-406720:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:406795-407022:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:407106-407336:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:407860-407960:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:408044-408274:1:exon

CRABP2
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: CRABP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(410445..414258)
location: region:410445-414258:-1
so has part: feature:410445-414258:-1:exon
subclass of: SO_0000010

115602789
type: Gene
SIO_000068: ncbigene

position:410445:-1
position: 410445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414258:-1
position: 414258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410445-414258:-1:exon

CRABP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: CRABP2
product: cellular retinoic acid binding protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 long SRA reads, 18 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030474194.1
SIO_010081: CRABP2
subclass of: SO_0000673
so part of: CRABP2
location: complement(join(410445..411459,411555..411671,412393..412571,414038..414258))
location: region:410445-414258:-1
so has part: feature:414038-414258:-1:exon
so has part: feature:412393-412571:-1:exon
so has part: feature:411555-411671:-1:exon
so has part: feature:410445-411459:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:414038-414258:-1:exon

position:414038:-1
position: 414038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:412393-412571:-1:exon

position:412393:-1
position: 412393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412571:-1
position: 412571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:411555-411671:-1:exon

position:411555:-1
position: 411555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411671:-1
position: 411671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:410445-411459:-1:exon

position:411459:-1
position: 411459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CRABP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: CRABP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cellular retinoic acid-binding protein 2
translation: MPNFSGNWKMKSSENFEELLKALGVNVMLRKIAVAAASKPAVEIRQDGESFYIKTSTTVRTTEISFCIGQEFEEQTVDGRPCKSLAKWASENKMVCEQRLLRGEGPKTGWSREMTNDGELILTMTADDVVCTRVYVRE
SIO_010081: CRABP2
subclass of: SO_0000673
so part of: CRABP2
location: complement(join(411409..411459,411555..411671,412393..412571,414038..414107))
location: region:411409-414107:-1
so has part: feature:414038-414107:-1:exon
so has part: feature:412393-412571:-1:exon
so has part: feature:411555-411671:-1:exon
so has part: feature:411409-411459:-1:exon

XP_030330054.1
type: Protein
SIO_000068: ncbiprotein

position:411409:-1
position: 411409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414107:-1
position: 414107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414038-414107:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412393-412571:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:411555-411671:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:411409-411459:-1:exon

ISG20L2
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: ISG20L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(416500..418381)
location: region:416500-418381:-1
so has part: feature:416500-418381:-1:exon
subclass of: SO_0000010

115602787
type: Gene
SIO_000068: ncbigene

position:416500:-1
position: 416500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418381:-1
position: 418381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416500-418381:-1:exon

ISG20L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: ISG20L2
product: interferon stimulated exonuclease gene 20 like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 104 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030474190.1
SIO_010081: ISG20L2
subclass of: SO_0000673
so part of: ISG20L2
location: complement(join(416500..417204,417545..417745,417867..418381))
location: region:416500-418381:-1
so has part: feature:417867-418381:-1:exon
so has part: feature:417545-417745:-1:exon
so has part: feature:416500-417204:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:417867-418381:-1:exon

position:417867:-1
position: 417867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:417545-417745:-1:exon

position:417545:-1
position: 417545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417745:-1
position: 417745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:416500-417204:-1:exon

position:417204:-1
position: 417204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ISG20L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: ISG20L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-stimulated 20 kDa exonuclease-like 2
translation: MSDLILNVHAAHVARPRAAPRGNRKHRRFLQRRRAERRGPAPARAKGSGGSGSGPAAPPSGPAVAIDCEMVGTGPGGRRSALARCSIVGYGGDVLYDRYVRPAAPVVDYRTRWSGIRRHHMAGAVPFGAARKEILRLLAGKVVVGHAVHNDFKALKYFHPEALTRDTSKMPLLNRKGGFPENATVSLKRLAKELLHKDIQVGKSGHSSVEDARTTMELYKVVEVEWEQQLLLTPKQE
SIO_010081: ISG20L2
subclass of: SO_0000673
so part of: ISG20L2
location: complement(join(417091..417204,417545..417745,417867..418265))
location: region:417091-418265:-1
so has part: feature:417867-418265:-1:exon
so has part: feature:417545-417745:-1:exon
so has part: feature:417091-417204:-1:exon

XP_030330050.1
type: Protein
SIO_000068: ncbiprotein

position:417091:-1
position: 417091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418265:-1
position: 418265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417867-418265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:417545-417745:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:417091-417204:-1:exon

RRNAD1
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: RRNAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 418006..421274
location: region:418006-421274:1
so has part: feature:418006-421274:1:exon
subclass of: SO_0000010

115602487
type: Gene
SIO_000068: ncbigene

position:418006:1
position: 418006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421274:1
position: 421274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418006-421274:1:exon

RRNAD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: RRNAD1
product: ribosomal RNA adenine dimethylase domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 long SRA reads, 6 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030473667.1
SIO_010081: RRNAD1
subclass of: SO_0000673
so part of: RRNAD1
location: join(418006..418403,418981..419094,419176..419470,419539..419601,419683..420389,420765..420952,421036..421274)
location: region:418006-421274:1
so has part: feature:418006-418403:1:exon
so has part: feature:418981-419094:1:exon
so has part: feature:419176-419470:1:exon
so has part: feature:419539-419601:1:exon
so has part: feature:419683-420389:1:exon
so has part: feature:420765-420952:1:exon
so has part: feature:421036-421274:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:418006-418403:1:exon

position:418403:1
position: 418403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:418981-419094:1:exon

position:418981:1
position: 418981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419094:1
position: 419094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:419176-419470:1:exon

position:419176:1
position: 419176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419470:1
position: 419470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:419539-419601:1:exon

position:419539:1
position: 419539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419601:1
position: 419601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:419683-420389:1:exon

position:419683:1
position: 419683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420389:1
position: 420389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:420765-420952:1:exon

position:420765:1
position: 420765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420952:1
position: 420952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:421036-421274:1:exon

position:421036:1
position: 421036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RRNAD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: RRNAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein RRNAD1
translation: MLQRARALRRPPGPVPTISQSIATAGPLGGAAGPLPLPPLPLARAGAGPRRSARRRCRKRRCFRLPRGAARGRATCAACTLRIRSDIAGGGGERGGGGTGTPPEPAPAAAARGGVTGGSDAIARREGADGGGRFPHGRPPPMGLCSGSSSEQPTSSGCCLCTGPCSTPASSISSPRGCGRSSPPPWQAALASAAPPQLARLLGGPDPGGPGPLWPLSLLAFAAASRALSFPRGPPGAAARPPCQSRRLHPLLRRHVKPKKQHEIRRLGNLLQRLSQATGCTHVVDVGAGQGHLSRFLAFGLGFSVTAVEGDGRLAGAAERFDRELLRELHKTGGTGPERPPRRRPPPQPRSPLTPRGPQHVPGRLDPLLPWGEFLLPPNPPAPAARNPLGGPGGATDGQRVLVTGLHACGDLSPALLRHFARSPAVAAVASVGCCYMKLSTPPHPPGYPLSSWVSALPGHELSYRARESACHALEQYRGRLGGGSPRLRAHCYRAVLETLIRGARPGLRRPGVQTVKKAHALSFPQYARLGLPRVGLDPASIPLDSAAVGTMLEQQHQVVAFFSLTLLLAPLVETLILLDRLLYLRERGFHCALVPLFDPRFSPRNLVLVAARCPLGTVLAGLEEEEEEGSEDEAEPPPAGQSPPNPSTGHRPQ
SIO_010081: RRNAD1
subclass of: SO_0000673
so part of: RRNAD1
location: join(418006..418403,418981..419094,419176..419470,419539..419601,419683..420389,420765..420952,421036..421235)
location: region:418006-421235:1
so has part: feature:418006-418403:1:exon
so has part: feature:418981-419094:1:exon
so has part: feature:419176-419470:1:exon
so has part: feature:419539-419601:1:exon
so has part: feature:419683-420389:1:exon
so has part: feature:420765-420952:1:exon
so has part: feature:421036-421235:1:exon

XP_030329527.1
type: Protein
SIO_000068: ncbiprotein

position:421235:1
position: 421235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418006-418403:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:418981-419094:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419176-419470:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419539-419601:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:419683-420389:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420765-420952:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:421036-421235:1:exon

MRPL24
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: MRPL24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(421265..422886)
location: region:421265-422886:-1
so has part: feature:421265-422886:-1:exon
subclass of: SO_0000010

115602788
type: Gene
SIO_000068: ncbigene

position:421265:-1
position: 421265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422886:-1
position: 422886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421265-422886:-1:exon

MRPL24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: MRPL24
product: mitochondrial ribosomal protein L24, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 549 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030474191.1
SIO_010081: MRPL24
subclass of: SO_0000673
so part of: MRPL24
location: complement(join(421265..421460,421550..421680,421770..421873,421954..422049,422148..422323,422808..422886))
location: region:421265-422886:-1
so has part: feature:422808-422886:-1:exon
so has part: feature:422148-422323:-1:exon
so has part: feature:421954-422049:-1:exon
so has part: feature:421770-421873:-1:exon
so has part: feature:421550-421680:-1:exon
so has part: feature:421265-421460:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:422808-422886:-1:exon

position:422808:-1
position: 422808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:422148-422323:-1:exon

position:422148:-1
position: 422148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422323:-1
position: 422323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:421954-422049:-1:exon

position:421954:-1
position: 421954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422049:-1
position: 422049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:421770-421873:-1:exon

position:421770:-1
position: 421770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421873:-1
position: 421873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:421550-421680:-1:exon

position:421550:-1
position: 421550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421680:-1
position: 421680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:421265-421460:-1:exon

position:421460:-1
position: 421460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MRPL24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: MRPL24
product: mitochondrial ribosomal protein L24, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 170 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030474193.1
SIO_010081: MRPL24
subclass of: SO_0000673
so part of: MRPL24
location: complement(join(421268..421460,421550..421697,421770..421873,421954..422049,422148..422323,422808..422886))
location: region:421268-422886:-1
so has part: feature:422808-422886:-1:exon
so has part: feature:422148-422323:-1:exon
so has part: feature:421954-422049:-1:exon
so has part: feature:421770-421873:-1:exon
so has part: feature:421550-421697:-1:exon
so has part: feature:421268-421460:-1:exon

position:421268:-1
position: 421268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422808-422886:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:422148-422323:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421954-422049:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:421770-421873:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:421550-421697:-1:exon

position:421697:-1
position: 421697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:421268-421460:-1:exon

MRPL24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: MRPL24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L24, mitochondrial isoform X1
translation: MRLSAVLAAARLPAGYRHGTWPPDTAAAKHRNPPGKQRRRVIVEPIASEDWKVFQGDTVQVLSGKDAGKQAMVTQVVRARNWVVVEGLNTHYRYINRTTKYSGTYVASEAPLLLSQISLVDPEDRKPTEVQWRYTEEGERVRVSLRSGRIIPLPLQQRRDGIVPEQWIDGPKDTSVEDAMEKTYVPSLKTFEEEIMDAMDIVETRRAKKSYWY
SIO_010081: MRPL24
subclass of: SO_0000673
so part of: MRPL24
location: complement(join(421324..421460,421550..421680,421770..421873,421954..422049,422148..422321))
location: region:421324-422321:-1
so has part: feature:422148-422321:-1:exon
so has part: feature:421954-422049:-1:exon
so has part: feature:421770-421873:-1:exon
so has part: feature:421550-421680:-1:exon
so has part: feature:421324-421460:-1:exon

XP_030330051.1
type: Protein
SIO_000068: ncbiprotein

position:421324:-1
position: 421324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422321:-1
position: 422321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422148-422321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:421954-422049:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421770-421873:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:421550-421680:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:421324-421460:-1:exon

MRPL24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: MRPL24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L24, mitochondrial isoform X2
translation: MRLSAVLAAARLPAGYRHGTWPPDTAAAKHRNPPGKQRRRVIVEPIASEDWKVFQGDTVQVLSGKDAGKQAMVTQVVRARNWVVVEGLNTHYRYINRTTKYSGTYVASEAPLLLSQISLVDPEDRCCLPSGSPRRCNGATRRRASASACPCAAAASSLCRCSSAATASSPSSGSMAQRTRRWRMRWRRRTCRL
SIO_010081: MRPL24
subclass of: SO_0000673
so part of: MRPL24
location: complement(join(421401..421460,421550..421697,421770..421873,421954..422049,422148..422321))
location: region:421401-422321:-1
so has part: feature:422148-422321:-1:exon
so has part: feature:421954-422049:-1:exon
so has part: feature:421770-421873:-1:exon
so has part: feature:421550-421697:-1:exon
so has part: feature:421401-421460:-1:exon

XP_030330053.1
type: Protein
SIO_000068: ncbiprotein

position:421401:-1
position: 421401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422148-422321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:421954-422049:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421770-421873:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:421550-421697:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:421401-421460:-1:exon

HDGF
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: HDGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(423351..429769)
location: region:423351-429769:-1
so has part: feature:423351-429769:-1:exon
subclass of: SO_0000010

115602790
type: Gene
SIO_000068: ncbigene

position:423351:-1
position: 423351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429769:-1
position: 429769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423351-429769:-1:exon

HDGF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: HDGF
product: heparin binding growth factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 1 EST, 746 long SRA reads, 21 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030474195.1
SIO_010081: HDGF
subclass of: SO_0000673
so part of: HDGF
location: complement(join(423351..423628,423714..423898,423979..424155,424241..424379,424470..424546,428173..429769))
location: region:423351-429769:-1
so has part: feature:428173-429769:-1:exon
so has part: feature:424470-424546:-1:exon
so has part: feature:424241-424379:-1:exon
so has part: feature:423979-424155:-1:exon
so has part: feature:423714-423898:-1:exon
so has part: feature:423351-423628:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:428173-429769:-1:exon

position:428173:-1
position: 428173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:424470-424546:-1:exon

position:424470:-1
position: 424470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424546:-1
position: 424546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:424241-424379:-1:exon

position:424241:-1
position: 424241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424379:-1
position: 424379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:423979-424155:-1:exon

position:423979:-1
position: 423979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424155:-1
position: 424155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:423714-423898:-1:exon

position:423714:-1
position: 423714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423898:-1
position: 423898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:423351-423628:-1:exon

position:423628:-1
position: 423628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HDGF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: HDGF
product: heparin binding growth factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 529 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030474196.1
SIO_010081: HDGF
subclass of: SO_0000673
so part of: HDGF
location: complement(join(423351..423628,423714..423898,423979..424155,424241..424379,424470..424546,426985..427085))
location: region:423351-427085:-1
so has part: feature:426985-427085:-1:exon
so has part: feature:424470-424546:-1:exon
so has part: feature:424241-424379:-1:exon
so has part: feature:423979-424155:-1:exon
so has part: feature:423714-423898:-1:exon
so has part: feature:423351-423628:-1:exon

position:427085:-1
position: 427085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426985-427085:-1:exon

position:426985:-1
position: 426985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:424470-424546:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:424241-424379:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:423979-424155:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:423714-423898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:423351-423628:-1:exon

HDGF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: HDGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatoma-derived growth factor isoform X1
translation: MSRSNRQKEYKCGDLVFAKMKGYPHWPARIDEMPEAAVKSSSNKYQVFFFGTHETAFLGPKDLFPYEECKEKFGKPNKRKGFSEGLWEIENNPTVKASGYQPTQKKTCPEDAEREPEGDGEKKGNAEGSSDEEGKLVIDEQSKEKNEKAGIKRKAEDASENSPKRPKEAEGQEGVKMDNEEPPKEEPKPNAGDGEKNSAAGAPDATEAKETGTGEVRDHKESL
SIO_010081: HDGF
subclass of: SO_0000673
so part of: HDGF
location: complement(join(423622..423628,423714..423898,423979..424155,424241..424379,424470..424546,428173..428259))
location: region:423622-428259:-1
so has part: feature:428173-428259:-1:exon
so has part: feature:424470-424546:-1:exon
so has part: feature:424241-424379:-1:exon
so has part: feature:423979-424155:-1:exon
so has part: feature:423714-423898:-1:exon
so has part: feature:423622-423628:-1:exon

XP_030330055.1
type: Protein
SIO_000068: ncbiprotein

position:423622:-1
position: 423622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428259:-1
position: 428259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428173-428259:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:424470-424546:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:424241-424379:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:423979-424155:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:423714-423898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:423622-423628:-1:exon

HDGF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: HDGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatoma-derived growth factor isoform X2
translation: MEQIDEMPEAAVKSSSNKYQVFFFGTHETAFLGPKDLFPYEECKEKFGKPNKRKGFSEGLWEIENNPTVKASGYQPTQKKTCPEDAEREPEGDGEKKGNAEGSSDEEGKLVIDEQSKEKNEKAGIKRKAEDASENSPKRPKEAEGQEGVKMDNEEPPKEEPKPNAGDGEKNSAAGAPDATEAKETGTGEVRDHKESL
SIO_010081: HDGF
subclass of: SO_0000673
so part of: HDGF
location: complement(join(423622..423628,423714..423898,423979..424155,424241..424379,424470..424546,426985..426993))
location: region:423622-426993:-1
so has part: feature:426985-426993:-1:exon
so has part: feature:424470-424546:-1:exon
so has part: feature:424241-424379:-1:exon
so has part: feature:423979-424155:-1:exon
so has part: feature:423714-423898:-1:exon
so has part: feature:423622-423628:-1:exon

XP_030330056.1
type: Protein
SIO_000068: ncbiprotein

position:426993:-1
position: 426993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426985-426993:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:424470-424546:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:424241-424379:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:423979-424155:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:423714-423898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:423622-423628:-1:exon

PRCC
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: PRCC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 431779..438615
location: region:431779-438615:1
so has part: feature:431779-438615:1:exon
subclass of: SO_0000010

115602791
type: Gene
SIO_000068: ncbigene

position:431779:1
position: 431779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438615:1
position: 438615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431779-438615:1:exon

PRCC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: PRCC
product: proline rich mitotic checkpoint control factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 195 long SRA reads, 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030474198.1
SIO_010081: PRCC
subclass of: SO_0000673
so part of: PRCC
location: join(431779..432570,433677..433724,434151..434723,435135..435230,436002..436145,436655..436720,437142..438615)
location: region:431779-438615:1
so has part: feature:431779-432570:1:exon
so has part: feature:433677-433724:1:exon
so has part: feature:434151-434723:1:exon
so has part: feature:435135-435230:1:exon
so has part: feature:436002-436145:1:exon
so has part: feature:436655-436720:1:exon
so has part: feature:437142-438615:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:431779-432570:1:exon

position:432570:1
position: 432570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:433677-433724:1:exon

position:433677:1
position: 433677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433724:1
position: 433724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:434151-434723:1:exon

position:434151:1
position: 434151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434723:1
position: 434723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:435135-435230:1:exon

position:435135:1
position: 435135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435230:1
position: 435230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:436002-436145:1:exon

position:436002:1
position: 436002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436145:1
position: 436145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:436655-436720:1:exon

position:436655:1
position: 436655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436720:1
position: 436720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:437142-438615:1:exon

position:437142:1
position: 437142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRCC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: PRCC
product: proline rich mitotic checkpoint control factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 186 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030474197.1
SIO_010081: PRCC
subclass of: SO_0000673
so part of: PRCC
location: join(431790..432570,433677..433727,434124..434723,435135..435230,436002..436145,436655..436720,437142..438615)
location: region:431790-438615:1
so has part: feature:431790-432570:1:exon
so has part: feature:433677-433727:1:exon
so has part: feature:434124-434723:1:exon
so has part: feature:435135-435230:1:exon
so has part: feature:436002-436145:1:exon
so has part: feature:436655-436720:1:exon
so has part: feature:437142-438615:1:exon

position:431790:1
position: 431790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431790-432570:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433677-433727:1:exon

position:433727:1
position: 433727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:434124-434723:1:exon

position:434124:1
position: 434124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:435135-435230:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:436002-436145:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:436655-436720:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:437142-438615:1:exon

PRCC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: PRCC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich protein PRCC isoform X1
translation: MSLVAYASSEEESDAEEPAGDEEEAAAAPPPPSAAAAQQPPARGLFATLPPPKAPAVPPPPGSGFPLLPPPPPFLMGPPPGVRGFGAPPGPAVSPPEAGGSGEQQPRPGGLLLPPPRNAAADTAALSLPPPGAAAAAPAAAGGDSSLPKPKKRTEPVRITVPELHKGDSDSEEDEPTKKKNTLQVPFALPETVQGRGEGSGLSALLPQPKNMTVKETNRLLLPYSISRKAGETPCDSKAKAPTSSSKAKPLSKPAVPTTPSPSAIKAAAKSAALQVTKQITQEEEDSDEEVEPENYFSLSDRSEPGVVGADTYMYSGPVVPEDPPPGTEPEPHFQDAAANAPLEFKTGAGSSGAQHSWVPKPGEDYSSQPYSHFPAYSEAGAYYQDYYGGGYYQEGEPAQAAAQEMSSDSSFIDDEAFKRLQGKRNRGREEINFVDIKGDDQLSGAQQWLTKSLTEEKTMKSFSKKKGDQPTGQQRRKHQITYLIHQAKERELELKNTWSENKLSRRQTQAKYGF
SIO_010081: PRCC
subclass of: SO_0000673
so part of: PRCC
location: join(432067..432570,433677..433727,434124..434723,435135..435230,436002..436145,436655..436720,437142..437228)
location: region:432067-437228:1
so has part: feature:432067-432570:1:exon
so has part: feature:433677-433727:1:exon
so has part: feature:434124-434723:1:exon
so has part: feature:435135-435230:1:exon
so has part: feature:436002-436145:1:exon
so has part: feature:436655-436720:1:exon
so has part: feature:437142-437228:1:exon

XP_030330057.1
type: Protein
SIO_000068: ncbiprotein

position:432067:1
position: 432067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437228:1
position: 437228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432067-432570:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433677-433727:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434124-434723:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:435135-435230:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:436002-436145:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:436655-436720:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:437142-437228:1:exon

PRCC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: PRCC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich protein PRCC isoform X2
translation: MSLVAYASSEEESDAEEPAGDEEEAAAAPPPPSAAAAQQPPARGLFATLPPPKAPAVPPPPGSGFPLLPPPPPFLMGPPPGVRGFGAPPGPAVSPPEAGGSGEQQPRPGGLLLPPPRNAAADTAALSLPPPGAAAAAPAAAGGDSSLPKPKKRTEPVRITVPELHKGDSDSEEDEPTKKKNTLQGRGEGSGLSALLPQPKNMTVKETNRLLLPYSISRKAGETPCDSKAKAPTSSSKAKPLSKPAVPTTPSPSAIKAAAKSAALQVTKQITQEEEDSDEEVEPENYFSLSDRSEPGVVGADTYMYSGPVVPEDPPPGTEPEPHFQDAAANAPLEFKTGAGSSGAQHSWVPKPGEDYSSQPYSHFPAYSEAGAYYQDYYGGGYYQEGEPAQAAAQEMSSDSSFIDDEAFKRLQGKRNRGREEINFVDIKGDDQLSGAQQWLTKSLTEEKTMKSFSKKKGDQPTGQQRRKHQITYLIHQAKERELELKNTWSENKLSRRQTQAKYGF
SIO_010081: PRCC
subclass of: SO_0000673
so part of: PRCC
location: join(432067..432570,433677..433724,434151..434723,435135..435230,436002..436145,436655..436720,437142..437228)
location: region:432067-437228:1
so has part: feature:432067-432570:1:exon
so has part: feature:433677-433724:1:exon
so has part: feature:434151-434723:1:exon
so has part: feature:435135-435230:1:exon
so has part: feature:436002-436145:1:exon
so has part: feature:436655-436720:1:exon
so has part: feature:437142-437228:1:exon

XP_030330058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:432067-432570:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433677-433724:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434151-434723:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:435135-435230:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:436002-436145:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:436655-436720:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:437142-437228:1:exon

INSRR
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: INSRR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 444952..454971
location: region:444952-454971:1
so has part: feature:444952-454971:1:exon
subclass of: SO_0000010

115602792
type: Gene
SIO_000068: ncbigene

position:444952:1
position: 444952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454971:1
position: 454971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444952-454971:1:exon

INSRR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: INSRR
product: insulin receptor related receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 26 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030474199.1
SIO_010081: INSRR
subclass of: SO_0000673
so part of: INSRR
location: join(444952..445506,446748..447060,447543..447685,447785..447929,448016..448230,448300..448426,448553..448791,448869..449036,449136..449331,449657..449717,449847..450051,450159..450295,450689..450851,451924..452035,452152..452201,452911..453140,453221..453331,453442..453601,454196..454325,454400..454534,454689..454971)
location: region:444952-454971:1
so has part: feature:444952-445506:1:exon
so has part: feature:446748-447060:1:exon
so has part: feature:447543-447685:1:exon
so has part: feature:447785-447929:1:exon
so has part: feature:448016-448230:1:exon
so has part: feature:448300-448426:1:exon
so has part: feature:448553-448791:1:exon
so has part: feature:448869-449036:1:exon
so has part: feature:449136-449331:1:exon
so has part: feature:449657-449717:1:exon
so has part: feature:449847-450051:1:exon
so has part: feature:450159-450295:1:exon
so has part: feature:450689-450851:1:exon
so has part: feature:451924-452035:1:exon
so has part: feature:452152-452201:1:exon
so has part: feature:452911-453140:1:exon
so has part: feature:453221-453331:1:exon
so has part: feature:453442-453601:1:exon
so has part: feature:454196-454325:1:exon
so has part: feature:454400-454534:1:exon
so has part: feature:454689-454971:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:444952-445506:1:exon

position:445506:1
position: 445506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:446748-447060:1:exon

position:446748:1
position: 446748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447060:1
position: 447060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:447543-447685:1:exon

position:447543:1
position: 447543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447685:1
position: 447685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:447785-447929:1:exon

position:447785:1
position: 447785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447929:1
position: 447929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:448016-448230:1:exon

position:448016:1
position: 448016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448230:1
position: 448230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:448300-448426:1:exon

position:448300:1
position: 448300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448426:1
position: 448426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:448553-448791:1:exon

position:448553:1
position: 448553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448791:1
position: 448791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:448869-449036:1:exon

position:448869:1
position: 448869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449036:1
position: 449036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:449136-449331:1:exon

position:449136:1
position: 449136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449331:1
position: 449331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:449657-449717:1:exon

position:449657:1
position: 449657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449717:1
position: 449717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:449847-450051:1:exon

position:449847:1
position: 449847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450051:1
position: 450051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:450159-450295:1:exon

position:450159:1
position: 450159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450295:1
position: 450295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:450689-450851:1:exon

position:450689:1
position: 450689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450851:1
position: 450851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:451924-452035:1:exon

position:451924:1
position: 451924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452035:1
position: 452035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:452152-452201:1:exon

position:452152:1
position: 452152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452201:1
position: 452201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:452911-453140:1:exon

position:452911:1
position: 452911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453140:1
position: 453140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:453221-453331:1:exon

position:453221:1
position: 453221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453331:1
position: 453331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:453442-453601:1:exon

position:453442:1
position: 453442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453601:1
position: 453601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:454196-454325:1:exon

position:454196:1
position: 454196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454325:1
position: 454325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:454400-454534:1:exon

position:454400:1
position: 454400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454534:1
position: 454534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:454689-454971:1:exon

position:454689:1
position: 454689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

INSRR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: INSRR
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:449700..449702,aa:OTHER)
product: LOW QUALITY PROTEIN: insulin receptor-related protein
translation: MDIRNDVSQLQKLENCSIIEGNLQILLMFTTGAEDFRGLSFPRLLMITEYLLLFRVYGLESLRDLFPNLSVIRGTNLFFSYALVIFEMPHLRDVGLHSLGHILRGSVRIERNQELCHLSTIDWGLLLPDAVDNTYIVGNKPAEECADVCPGILDVEKPCAQTSVNGQLEYRCWTSSYCQKVCPCGAGSACTATGECCHAECLGGCGRPRDGRSCVACRHFQFQGQCLPSCPPRTYEYEGWRCVTAEYCASLRKVSGNPRDASKFVIHQRQCLSECPAGYTRNESSMFCHKCEGLCPKECKVGTKTIDSTRAAQELGGCTLIEGNLIVNIRRGYNLASELQSSLGLIETITGFLKIKHSFALVSLSFFKNLKLIRGDSMVDGNYTLYVLDNQNLQQLWDWSHHVLSIPVGKMYFAFNPKLCLAEIYRMEEVTGTKGRQNKAEINPRTNGDRASCKTQTLRFISNVTESDRIFLKWERYRPPEYRDLLSFIVYYKESPFQNVSEYVGQDACGAQSWNVLDVELPLSSDQEPGVALLNLRPWTQYAIFVRAITLTTAEEGRNYGAQSEVVYIRTMPAAPTVPRDVISMSNSSSHIVVRWKPPTQRNGNITYYLVLWQQLAEDMELYVNDYCHKGLKLPTSSADTRFGAGDGDSPEVEQDAEERCCPCRPADGQLHMQGEAESFQKKFENFLHNSIIIPRPPWKVTSINKSPQRXAGTTQPPAPSSRAGGDPKPHFQIFEDKVVRDRAVLSRLRHFTEYRIDIHACNHAAHTVGCSASTFVFARTMPELQADNIPGNVTWEPAGKNSVLLRWEEPRNPNGLILKYEIKYSRESEVTTVVCVSRHRYSKYGGVHLALLQPGNYSAKVRATSLAGNGSWTGLIKFYILGPAEEESNSFHVLLTVTPVVLMVLISCLAIFVFFYNKKRYGTLYASVNPEYFSTSDMYIPDEWEVSRERITVIRELGQGSFGMVYEGLLLGLDTEGEETKVALKTVNELATMRERIEFLNEASVMKAFKCHHVVRLLGVVSQGQPALVIMELMTRGDLKSYLRSLRPDAENNPGLPRPSLKDMIQMAGEIADGMAYLNANKFVHRDLAARNCMVSEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPEALKDGIFNTQSDVWSFGVVLWEITTLAEQPYQGMSNEQVLRFVMDNGVLERPENCPDKLHELMCLCWQQNPRQRPSFIQLLESIKDHMAPAFRTLSFFYSRGGSGEPSDTDMDQSHGKEEPPESPPPSHKDHSSGGLPNGTA
SIO_010081: INSRR
subclass of: SO_0000673
so part of: INSRR
location: join(444966..445506,446748..447060,447543..447685,447785..447929,448016..448230,448300..448426,448553..448791,448869..449036,449136..449331,449657..449717,449847..450051,450159..450295,450689..450851,451924..452035,452152..452201,452911..453140,453221..453331,453442..453601,454196..454325,454400..454534,454689..454941)
location: region:444966-454941:1
so has part: feature:444966-445506:1:exon
so has part: feature:446748-447060:1:exon
so has part: feature:447543-447685:1:exon
so has part: feature:447785-447929:1:exon
so has part: feature:448016-448230:1:exon
so has part: feature:448300-448426:1:exon
so has part: feature:448553-448791:1:exon
so has part: feature:448869-449036:1:exon
so has part: feature:449136-449331:1:exon
so has part: feature:449657-449717:1:exon
so has part: feature:449847-450051:1:exon
so has part: feature:450159-450295:1:exon
so has part: feature:450689-450851:1:exon
so has part: feature:451924-452035:1:exon
so has part: feature:452152-452201:1:exon
so has part: feature:452911-453140:1:exon
so has part: feature:453221-453331:1:exon
so has part: feature:453442-453601:1:exon
so has part: feature:454196-454325:1:exon
so has part: feature:454400-454534:1:exon
so has part: feature:454689-454941:1:exon

XP_030330059.1
type: Protein
SIO_000068: ncbiprotein

position:444966:1
position: 444966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454941:1
position: 454941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444966-445506:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:446748-447060:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:447543-447685:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:447785-447929:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:448016-448230:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:448300-448426:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448553-448791:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448869-449036:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:449136-449331:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:449657-449717:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:449847-450051:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:450159-450295:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:450689-450851:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:451924-452035:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:452152-452201:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:452911-453140:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:453221-453331:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:453442-453601:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:454196-454325:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:454400-454534:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:454689-454941:1:exon

NTRK1
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: NTRK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 456180..463883
location: region:456180-463883:1
so has part: feature:456180-463883:1:exon
subclass of: SO_0000010

115602793
type: Gene
SIO_000068: ncbigene

position:456180:1
position: 456180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463883:1
position: 463883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456180-463883:1:exon

NTRK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: NTRK1
product: neurotrophic receptor tyrosine kinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 long SRA read, 27 Proteins, and 62% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030474200.1
SIO_010081: NTRK1
subclass of: SO_0000673
so part of: NTRK1
location: join(456180..456367,457753..457827,457987..458058,458413..458481,458758..458912,459006..459154,459393..459519,459609..459938,460149..460166,460359..460417,460606..460708,461283..461429,461523..461653,461727..461899,462532..462772,463089..463247,463327..463883)
location: region:456180-463883:1
so has part: feature:456180-456367:1:exon
so has part: feature:457753-457827:1:exon
so has part: feature:457987-458058:1:exon
so has part: feature:458413-458481:1:exon
so has part: feature:458758-458912:1:exon
so has part: feature:459006-459154:1:exon
so has part: feature:459393-459519:1:exon
so has part: feature:459609-459938:1:exon
so has part: feature:460149-460166:1:exon
so has part: feature:460359-460417:1:exon
so has part: feature:460606-460708:1:exon
so has part: feature:461283-461429:1:exon
so has part: feature:461523-461653:1:exon
so has part: feature:461727-461899:1:exon
so has part: feature:462532-462772:1:exon
so has part: feature:463089-463247:1:exon
so has part: feature:463327-463883:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:456180-456367:1:exon

position:456367:1
position: 456367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:457753-457827:1:exon

position:457753:1
position: 457753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457827:1
position: 457827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:457987-458058:1:exon

position:457987:1
position: 457987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458058:1
position: 458058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:458413-458481:1:exon

position:458413:1
position: 458413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458481:1
position: 458481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:458758-458912:1:exon

position:458758:1
position: 458758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458912:1
position: 458912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:459006-459154:1:exon

position:459006:1
position: 459006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459154:1
position: 459154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:459393-459519:1:exon

position:459393:1
position: 459393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459519:1
position: 459519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:459609-459938:1:exon

position:459609:1
position: 459609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459938:1
position: 459938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:460149-460166:1:exon

position:460149:1
position: 460149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460166:1
position: 460166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:460359-460417:1:exon

position:460359:1
position: 460359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460417:1
position: 460417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:460606-460708:1:exon

position:460606:1
position: 460606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460708:1
position: 460708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:461283-461429:1:exon

position:461283:1
position: 461283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461429:1
position: 461429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:461523-461653:1:exon

position:461523:1
position: 461523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461653:1
position: 461653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:461727-461899:1:exon

position:461727:1
position: 461727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461899:1
position: 461899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:462532-462772:1:exon

position:462532:1
position: 462532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462772:1
position: 462772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:463089-463247:1:exon

position:463089:1
position: 463089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463247:1
position: 463247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:463327-463883:1:exon

position:463327:1
position: 463327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NTRK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: NTRK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high affinity nerve growth factor receptor
translation: MPPLPAWLCLAALLLPLPLPAPGAAGPCPRGCRCPRAGSVLCREPGTVSSLARLLGTGGFTDVVIENQQTLTALTRADTRMLRDLRSLTISRSGLQHISDDAFLDTPRLSHVNLSFNVLQSLSWKSFQHLPLQELILVGNPFNCSCGLRWLQLWQIGSRAELGNQSLGCWEGSELVPLGSRPLRACEPPTVRIEPPGAALRQGDSVNLTCHIAAEPPATAEWVLPEVGPELPVVTKLSDRELILEISNASSSLNHKDLTCRAENVAGPAEDSVVLNVTFPPVILLLHEAIPQHFWCIPFSVDGNPAPSIRWLFNGSALAEGPYIHTRIVEYEHNSTVLHGCLQLNRPTHVNNGNYTLVLRNPLGSASRSVQGRFMENPFSFSPEEPIPVSLSPLGTRNSSLDGPVETADEHAFGVSVAVALAVFASLFLSVMLIALNKCGRRSKFGINRSAVLAQEDDLAMSLHFMNLGSSPLSSAESKLEGLKSNFIENPQYFCDACVHHVQRRDIVLKWELGEGAFGKVFLAECYNLLPEQEKMLVAVKALKEVTESARLDFQREAELLTVLQHEHIVKFYGVCTEGEPLIMVFEYMKHGDLNRFLRSHGPDAKMLEQGQGQPCGPLTLSHMLQIATQIASGMVYLASLHFVHRDLATRNCLVGHDLVVKIGDFGMSRDIYSTDYYRVGAGPCCPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRELERPRTCPSEVYSIMQSCWQREPQQRRPIKDIHSHLQALVKTPPIYLDILG
SIO_010081: NTRK1
subclass of: SO_0000673
so part of: NTRK1
location: join(456180..456367,457753..457827,457987..458058,458413..458481,458758..458912,459006..459154,459393..459519,459609..459938,460149..460166,460359..460417,460606..460708,461283..461429,461523..461653,461727..461899,462532..462772,463089..463247,463327..463512)
location: region:456180-463512:1
so has part: feature:456180-456367:1:exon
so has part: feature:457753-457827:1:exon
so has part: feature:457987-458058:1:exon
so has part: feature:458413-458481:1:exon
so has part: feature:458758-458912:1:exon
so has part: feature:459006-459154:1:exon
so has part: feature:459393-459519:1:exon
so has part: feature:459609-459938:1:exon
so has part: feature:460149-460166:1:exon
so has part: feature:460359-460417:1:exon
so has part: feature:460606-460708:1:exon
so has part: feature:461283-461429:1:exon
so has part: feature:461523-461653:1:exon
so has part: feature:461727-461899:1:exon
so has part: feature:462532-462772:1:exon
so has part: feature:463089-463247:1:exon
so has part: feature:463327-463512:1:exon

XP_030330060.1
type: Protein
SIO_000068: ncbiprotein

position:463512:1
position: 463512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456180-456367:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:457753-457827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457987-458058:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:458413-458481:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:458758-458912:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:459006-459154:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:459393-459519:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:459609-459938:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:460149-460166:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:460359-460417:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:460606-460708:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:461283-461429:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:461523-461653:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:461727-461899:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:462532-462772:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:463089-463247:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:463327-463512:1:exon

GLMP
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: GLMP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(466205..468434)
location: region:466205-468434:-1
so has part: feature:466205-468434:-1:exon
subclass of: SO_0000010

115602488
type: Gene
SIO_000068: ncbigene

position:466205:-1
position: 466205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468434:-1
position: 468434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466205-468434:-1:exon

GLMP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: GLMP
product: glycosylated lysosomal membrane protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 long SRA reads, 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032920372.1
SIO_010081: GLMP
subclass of: SO_0000673
so part of: GLMP
location: complement(join(466205..466926,467644..467923,468014..468223,468414..468434))
location: region:466205-468434:-1
so has part: feature:468414-468434:-1:exon
so has part: feature:468014-468223:-1:exon
so has part: feature:467644-467923:-1:exon
so has part: feature:466205-466926:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:468414-468434:-1:exon

position:468414:-1
position: 468414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:468014-468223:-1:exon

position:468014:-1
position: 468014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468223:-1
position: 468223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:467644-467923:-1:exon

position:467644:-1
position: 467644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467923:-1
position: 467923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:466205-466926:-1:exon

position:466926:-1
position: 466926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GLMP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: GLMP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycosylated lysosomal membrane protein
translation: MTAEFSGRGRVAATSPCHLLQHSETAPRWEFVLAGVAPRSNSSRFVLEVAAVEEPGVAPELRAARSIDDEYTPTIFEMLSLAAQAQNDSSPRSFLQWKATAYGSRSPRREDGIRCRSHGLRAANWSLPMSALSVPTLGTGPAAAYKRQRRQHLLWGEEGKVYPGEALPEAGRRCWASGSPPRTPSPPSSSPSWPWRWAPRCCCCCWAAACSSAPRGSATPSTSPSTEWDEPRETPRITLVPRGCCRGSSALSLVPSPSSRGPGSEGTQVPVAVAHIVSPSVPLLLLPQSSSRCSPSAPDPPNQGKGLGGVDQGFLELLPKG
SIO_010081: GLMP
subclass of: SO_0000673
so part of: GLMP
location: complement(join(466472..466926,467644..467923,468014..468223,468414..468434))
location: region:466472-468434:-1
so has part: feature:468414-468434:-1:exon
so has part: feature:468014-468223:-1:exon
so has part: feature:467644-467923:-1:exon
so has part: feature:466472-466926:-1:exon

XP_032776263.1
type: Protein
SIO_000068: ncbiprotein

position:466472:-1
position: 466472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468414-468434:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:468014-468223:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:467644-467923:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:466472-466926:-1:exon

MCL1
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: MCL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(470200..479374)
location: region:470200-479374:-1
so has part: feature:470200-479374:-1:exon
subclass of: SO_0000010

115602795
type: Gene
SIO_000068: ncbigene

position:470200:-1
position: 470200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479374:-1
position: 479374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470200-479374:-1:exon

MCL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: MCL1
product: MCL1 apoptosis regulator, BCL2 family member, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 long SRA reads, 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030474204.1
SIO_010081: MCL1
subclass of: SO_0000673
so part of: MCL1
location: complement(join(470200..470243,470358..470489,476016..476128,476556..476803,478765..479374))
location: region:470200-479374:-1
so has part: feature:478765-479374:-1:exon
so has part: feature:476556-476803:-1:exon
so has part: feature:476016-476128:-1:exon
so has part: feature:470358-470489:-1:exon
so has part: feature:470200-470243:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:478765-479374:-1:exon

position:478765:-1
position: 478765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:476556-476803:-1:exon

position:476556:-1
position: 476556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476803:-1
position: 476803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:476016-476128:-1:exon

position:476016:-1
position: 476016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476128:-1
position: 476128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:470358-470489:-1:exon

position:470358:-1
position: 470358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470489:-1
position: 470489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:470200-470243:-1:exon

position:470243:-1
position: 470243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MCL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: MCL1
product: MCL1 apoptosis regulator, BCL2 family member, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 long SRA reads, 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030474203.1
SIO_010081: MCL1
subclass of: SO_0000673
so part of: MCL1
location: complement(join(470200..470243,470358..470489,473639..473776,476016..476128,476556..476803,478765..479374))
location: region:470200-479374:-1
so has part: feature:478765-479374:-1:exon
so has part: feature:476556-476803:-1:exon
so has part: feature:476016-476128:-1:exon
so has part: feature:473639-473776:-1:exon
so has part: feature:470358-470489:-1:exon
so has part: feature:470200-470243:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:478765-479374:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476556-476803:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:476016-476128:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:473639-473776:-1:exon

position:473639:-1
position: 473639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473776:-1
position: 473776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:470358-470489:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:470200-470243:-1:exon

MCL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: MCL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: induced myeloid leukemia cell differentiation protein Mcl-1 isoform X2
translation: MFALKRNAVIGLNLYCGGSPALAPAPAAPGGGPAPPPPSAAPAGAWAAGRAEALLGCGAAPLPAPAPLPAPARPVPLWSPEEELDGCEPEPERGPAGDSLPAPPPDALRQASLELIGRYLREAAGEAEPGAKKLFPGLLGGPGRPGGAADAVMGKALETLRRVGDGVMAKHELAFQGMLRKLEIQKEEDLQSVREVAAHLFSDGVTNWGRVVTLISFGAFVAKHLKSIQQEKCISSLAGIITDALVSSRREWLLSQGGWEGFVDFFRVEDLEGSIRNVLMAFAGVAGLGASLAYMIRQNTLRTTARRGG
SIO_010081: MCL1
subclass of: SO_0000673
so part of: MCL1
location: complement(join(470450..470489,476016..476128,476556..476803,478765..479293))
location: region:470450-479293:-1
so has part: feature:478765-479293:-1:exon
so has part: feature:476556-476803:-1:exon
so has part: feature:476016-476128:-1:exon
so has part: feature:470450-470489:-1:exon

XP_030330064.1
type: Protein
SIO_000068: ncbiprotein

position:470450:-1
position: 470450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479293:-1
position: 479293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478765-479293:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476556-476803:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:476016-476128:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:470450-470489:-1:exon

MCL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: MCL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: induced myeloid leukemia cell differentiation protein Mcl-1 isoform X1
translation: MFALKRNAVIGLNLYCGGSPALAPAPAAPGGGPAPPPPSAAPAGAWAAGRAEALLGCGAAPLPAPAPLPAPARPVPLWSPEEELDGCEPEPERGPAGDSLPAPPPDALRQASLELIGRYLREAAGEAEPGAKKLFPGLLGGPGRPGGAADAVMGKALETLRRVGDGVMAKHELAFQGMLRKLEIQKEEDLQSVREVAAHLFSDGVTNWGRVVTLISFGAFVAKHLKSIQQEKCISSLAGIITDALVSSRREWLLSQGGWEGFVDFFRVEDLEGSIRNVLMAFAGVAGLGASLAYMIRLFRTCSSPGALLQSWSWAPAGPGGADNPELPLLLPRSASGFSEPRLQNTLRTTARRGG
SIO_010081: MCL1
subclass of: SO_0000673
so part of: MCL1
location: complement(join(470450..470489,473639..473776,476016..476128,476556..476803,478765..479293))
location: region:470450-479293:-1
so has part: feature:478765-479293:-1:exon
so has part: feature:476556-476803:-1:exon
so has part: feature:476016-476128:-1:exon
so has part: feature:473639-473776:-1:exon
so has part: feature:470450-470489:-1:exon

XP_030330063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:478765-479293:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476556-476803:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:476016-476128:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:473639-473776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:470450-470489:-1:exon

ENSA
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: ENSA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(481379..486219)
location: region:481379-486219:-1
so has part: feature:481379-486219:-1:exon
subclass of: SO_0000010

115602797
type: Gene
SIO_000068: ncbigene

position:481379:-1
position: 481379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486219:-1
position: 486219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481379-486219:-1:exon

ENSA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: ENSA
product: endosulfine alpha, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 149 long SRA reads, 19 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030474211.1
SIO_010081: ENSA
subclass of: SO_0000673
so part of: ENSA
location: complement(join(481379..482853,482933..483099,483977..484102,486019..486219))
location: region:481379-486219:-1
so has part: feature:486019-486219:-1:exon
so has part: feature:483977-484102:-1:exon
so has part: feature:482933-483099:-1:exon
so has part: feature:481379-482853:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:486019-486219:-1:exon

position:486019:-1
position: 486019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:483977-484102:-1:exon

position:483977:-1
position: 483977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484102:-1
position: 484102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:482933-483099:-1:exon

position:482933:-1
position: 482933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483099:-1
position: 483099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:481379-482853:-1:exon

position:482853:-1
position: 482853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ENSA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: ENSA
product: endosulfine alpha, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 169 long SRA reads, 37 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030474212.1
SIO_010081: ENSA
subclass of: SO_0000673
so part of: ENSA
location: complement(join(481379..483099,483977..484102,486019..486204))
location: region:481379-486204:-1
so has part: feature:486019-486204:-1:exon
so has part: feature:483977-484102:-1:exon
so has part: feature:481379-483099:-1:exon

position:486204:-1
position: 486204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486019-486204:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:483977-484102:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:481379-483099:-1:exon

ENSA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: ENSA
product: endosulfine alpha, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 146 long SRA reads, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030474209.1
SIO_010081: ENSA
subclass of: SO_0000673
so part of: ENSA
location: complement(join(481379..482853,482933..483099,483977..484102,484218..484286,485857..485992))
location: region:481379-485992:-1
so has part: feature:485857-485992:-1:exon
so has part: feature:484218-484286:-1:exon
so has part: feature:483977-484102:-1:exon
so has part: feature:482933-483099:-1:exon
so has part: feature:481379-482853:-1:exon

position:485992:-1
position: 485992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485857-485992:-1:exon

position:485857:-1
position: 485857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:484218-484286:-1:exon

position:484218:-1
position: 484218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484286:-1
position: 484286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:483977-484102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:482933-483099:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:481379-482853:-1:exon

ENSA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: ENSA
product: endosulfine alpha, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 158 long SRA reads, 18 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030474210.1
SIO_010081: ENSA
subclass of: SO_0000673
so part of: ENSA
location: complement(join(481379..483099,483977..484102,484218..484286,485857..485981))
location: region:481379-485981:-1
so has part: feature:485857-485981:-1:exon
so has part: feature:484218-484286:-1:exon
so has part: feature:483977-484102:-1:exon
so has part: feature:481379-483099:-1:exon

position:485981:-1
position: 485981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485857-485981:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:484218-484286:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:483977-484102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:481379-483099:-1:exon

ENSA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: ENSA
product: endosulfine alpha, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 158 long SRA reads, 18 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030474213.1
SIO_010081: ENSA
subclass of: SO_0000673
so part of: ENSA
location: complement(join(481379..483099,483977..484102,485753..485794))
location: region:481379-485794:-1
so has part: feature:485753-485794:-1:exon
so has part: feature:483977-484102:-1:exon
so has part: feature:481379-483099:-1:exon

position:485794:-1
position: 485794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485753-485794:-1:exon

position:485753:-1
position: 485753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:483977-484102:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:481379-483099:-1:exon

ENSA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: ENSA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-endosulfine isoform X3
translation: MAAPLGTGARGEETGQEKQDMQEKEAITPERAEEVKLKAKYPNLGQKPGGSDFLMKRLQKGQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAGDRSTRIPVVP
SIO_010081: ENSA
subclass of: SO_0000673
so part of: ENSA
location: complement(join(482820..482853,482933..483099,483977..484102,486019..486075))
location: region:482820-486075:-1
so has part: feature:486019-486075:-1:exon
so has part: feature:483977-484102:-1:exon
so has part: feature:482933-483099:-1:exon
so has part: feature:482820-482853:-1:exon

XP_030330071.1
type: Protein
SIO_000068: ncbiprotein

position:482820:-1
position: 482820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486075:-1
position: 486075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486019-486075:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:483977-484102:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:482933-483099:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:482820-482853:-1:exon

ENSA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: ENSA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-endosulfine isoform X1
translation: MLASHWLPRGLRVGLPTGLVPQPFLITLVLQALHQPHCPAPEDMQEKEAITPERAEEVKLKAKYPNLGQKPGGSDFLMKRLQKGQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAGDRSTRIPVVP
SIO_010081: ENSA
subclass of: SO_0000673
so part of: ENSA
location: complement(join(482820..482853,482933..483099,483977..484102,484218..484286,485857..485913))
location: region:482820-485913:-1
so has part: feature:485857-485913:-1:exon
so has part: feature:484218-484286:-1:exon
so has part: feature:483977-484102:-1:exon
so has part: feature:482933-483099:-1:exon
so has part: feature:482820-482853:-1:exon

XP_030330069.1
type: Protein
SIO_000068: ncbiprotein

position:485913:-1
position: 485913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485857-485913:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:484218-484286:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:483977-484102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:482933-483099:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:482820-482853:-1:exon

ENSA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: ENSA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-endosulfine isoform X4
translation: MAAPLGTGARGEETGQEKQDMQEKEAITPERAEEVKLKAKYPNLGQKPGGSDFLMKRLQKGQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG
SIO_010081: ENSA
subclass of: SO_0000673
so part of: ENSA
location: complement(join(482929..483099,483977..484102,486019..486075))
location: region:482929-486075:-1
so has part: feature:486019-486075:-1:exon
so has part: feature:483977-484102:-1:exon
so has part: feature:482929-483099:-1:exon

XP_030330072.1
type: Protein
SIO_000068: ncbiprotein

position:482929:-1
position: 482929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486019-486075:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:483977-484102:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:482929-483099:-1:exon

ENSA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: ENSA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-endosulfine isoform X2
translation: MLASHWLPRGLRVGLPTGLVPQPFLITLVLQALHQPHCPAPEDMQEKEAITPERAEEVKLKAKYPNLGQKPGGSDFLMKRLQKGQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG
SIO_010081: ENSA
subclass of: SO_0000673
so part of: ENSA
location: complement(join(482929..483099,483977..484102,484218..484286,485857..485913))
location: region:482929-485913:-1
so has part: feature:485857-485913:-1:exon
so has part: feature:484218-484286:-1:exon
so has part: feature:483977-484102:-1:exon
so has part: feature:482929-483099:-1:exon

XP_030330070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:485857-485913:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:484218-484286:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:483977-484102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:482929-483099:-1:exon

ENSA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: ENSA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-endosulfine isoform X5
translation: MQEKEAITPERAEEVKLKAKYPNLGQKPGGSDFLMKRLQKGQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG
SIO_010081: ENSA
subclass of: SO_0000673
so part of: ENSA
location: complement(join(482929..483099,483977..484099))
location: region:482929-484099:-1
so has part: feature:483977-484099:-1:exon
so has part: feature:482929-483099:-1:exon

XP_030330073.1
type: Protein
SIO_000068: ncbiprotein

position:484099:-1
position: 484099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483977-484099:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:482929-483099:-1:exon

GOLPH3L
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: GOLPH3L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(486712..492430)
location: region:486712-492430:-1
so has part: feature:486712-492430:-1:exon
subclass of: SO_0000010

115602796
type: Gene
SIO_000068: ncbigene

position:486712:-1
position: 486712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:492430:-1
position: 492430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486712-492430:-1:exon

GOLPH3L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: GOLPH3L
product: golgi phosphoprotein 3 like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 long SRA reads, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030474208.1
SIO_010081: GOLPH3L
subclass of: SO_0000673
so part of: GOLPH3L
location: complement(join(486712..487704,488120..488234,488335..488466,491141..491345,492267..492430))
location: region:486712-492430:-1
so has part: feature:492267-492430:-1:exon
so has part: feature:491141-491345:-1:exon
so has part: feature:488335-488466:-1:exon
so has part: feature:488120-488234:-1:exon
so has part: feature:486712-487704:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:492267-492430:-1:exon

position:492267:-1
position: 492267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:491141-491345:-1:exon

position:491141:-1
position: 491141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491345:-1
position: 491345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:488335-488466:-1:exon

position:488335:-1
position: 488335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488466:-1
position: 488466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:488120-488234:-1:exon

position:488120:-1
position: 488120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488234:-1
position: 488234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:486712-487704:-1:exon

position:487704:-1
position: 487704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GOLPH3L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: GOLPH3L
product: golgi phosphoprotein 3 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 long SRA reads, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030474206.1
SIO_010081: GOLPH3L
subclass of: SO_0000673
so part of: GOLPH3L
location: complement(join(486712..487704,488120..488234,488335..488466,491141..491345,492292..492369))
location: region:486712-492369:-1
so has part: feature:492292-492369:-1:exon
so has part: feature:491141-491345:-1:exon
so has part: feature:488335-488466:-1:exon
so has part: feature:488120-488234:-1:exon
so has part: feature:486712-487704:-1:exon

position:492369:-1
position: 492369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492292-492369:-1:exon

position:492292:-1
position: 492292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:491141-491345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:488335-488466:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:488120-488234:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:486712-487704:-1:exon

GOLPH3L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: GOLPH3L
product: golgi phosphoprotein 3 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 long SRA reads, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030474205.1
SIO_010081: GOLPH3L
subclass of: SO_0000673
so part of: GOLPH3L
location: complement(join(486712..487140,487231..487704,488120..488234,488335..488466,491141..491345,492267..492353))
location: region:486712-492353:-1
so has part: feature:492267-492353:-1:exon
so has part: feature:491141-491345:-1:exon
so has part: feature:488335-488466:-1:exon
so has part: feature:488120-488234:-1:exon
so has part: feature:487231-487704:-1:exon
so has part: feature:486712-487140:-1:exon

position:492353:-1
position: 492353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492267-492353:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:491141-491345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:488335-488466:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:488120-488234:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:487231-487704:-1:exon

position:487231:-1
position: 487231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:486712-487140:-1:exon

position:487140:-1
position: 487140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GOLPH3L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: GOLPH3L
product: golgi phosphoprotein 3 like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 long SRA reads, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030474207.1
SIO_010081: GOLPH3L
subclass of: SO_0000673
so part of: GOLPH3L
location: complement(join(486712..487704,488120..488234,488335..488466,491141..491339,492267..492348))
location: region:486712-492348:-1
so has part: feature:492267-492348:-1:exon
so has part: feature:491141-491339:-1:exon
so has part: feature:488335-488466:-1:exon
so has part: feature:488120-488234:-1:exon
so has part: feature:486712-487704:-1:exon

position:492348:-1
position: 492348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492267-492348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:491141-491339:-1:exon

position:491339:-1
position: 491339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:488335-488466:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:488120-488234:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:486712-487704:-1:exon

GOLPH3L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: GOLPH3L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Golgi phosphoprotein 3-like
translation: MTTLTHRSRRAEGRSTDRKPTGEEDAAADRDLNDEDPDDSKDIRLTLMEEVLLLGLKDKEGYTSFWNDCISSGLRGGILIELAFRGRIRLEPPSMRKKRLLERKVLLKSDAPTGDVLLDETLRHIKATEAAESVQTWIELLTGETWNPFKLQYQLRNVRERVAKALVEKGILTTEKQNFLLFDMTTHPVSNGTEKQRLVRRLQESVLERWVNDPHRMDRRTLALLVLAHSSDVLENVFASLADDKYDVAMNRTKDLLDMDPEVEAAKAKGTEMVWAVLAAFNKS
SIO_010081: GOLPH3L
subclass of: SO_0000673
so part of: GOLPH3L
location: complement(join(487277..487704,488120..488234,488335..488466,491141..491320))
location: region:487277-491320:-1
so has part: feature:491141-491320:-1:exon
so has part: feature:488335-488466:-1:exon
so has part: feature:488120-488234:-1:exon
so has part: feature:487277-487704:-1:exon

XP_030330065.1
type: Protein
SIO_000068: ncbiprotein

position:487277:-1
position: 487277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491320:-1
position: 491320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491141-491320:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:488335-488466:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:488120-488234:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:487277-487704:-1:exon

GOLPH3L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: GOLPH3L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Golgi phosphoprotein 3-like
translation: MTTLTHRSRRAEGRSTDRKPTGEEDAAADRDLNDEDPDDSKDIRLTLMEEVLLLGLKDKEGYTSFWNDCISSGLRGGILIELAFRGRIRLEPPSMRKKRLLERKVLLKSDAPTGDVLLDETLRHIKATEAAESVQTWIELLTGETWNPFKLQYQLRNVRERVAKALVEKGILTTEKQNFLLFDMTTHPVSNGTEKQRLVRRLQESVLERWVNDPHRMDRRTLALLVLAHSSDVLENVFASLADDKYDVAMNRTKDLLDMDPEVEAAKAKGTEMVWAVLAAFNKS
SIO_010081: GOLPH3L
subclass of: SO_0000673
so part of: GOLPH3L
location: complement(join(487277..487704,488120..488234,488335..488466,491141..491320))
location: region:487277-491320:-1
so has part: feature:491141-491320:-1:exon
so has part: feature:488335-488466:-1:exon
so has part: feature:488120-488234:-1:exon
so has part: feature:487277-487704:-1:exon

XP_030330066.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:491141-491320:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:488335-488466:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:488120-488234:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:487277-487704:-1:exon

GOLPH3L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: GOLPH3L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Golgi phosphoprotein 3-like
translation: MTTLTHRSRRAEGRSTDRKPTGEEDAAADRDLNDEDPDDSKDIRLTLMEEVLLLGLKDKEGYTSFWNDCISSGLRGGILIELAFRGRIRLEPPSMRKKRLLERKVLLKSDAPTGDVLLDETLRHIKATEAAESVQTWIELLTGETWNPFKLQYQLRNVRERVAKALVEKGILTTEKQNFLLFDMTTHPVSNGTEKQRLVRRLQESVLERWVNDPHRMDRRTLALLVLAHSSDVLENVFASLADDKYDVAMNRTKDLLDMDPEVEAAKAKGTEMVWAVLAAFNKS
SIO_010081: GOLPH3L
subclass of: SO_0000673
so part of: GOLPH3L
location: complement(join(487277..487704,488120..488234,488335..488466,491141..491320))
location: region:487277-491320:-1
so has part: feature:491141-491320:-1:exon
so has part: feature:488335-488466:-1:exon
so has part: feature:488120-488234:-1:exon
so has part: feature:487277-487704:-1:exon

XP_030330067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:491141-491320:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:488335-488466:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:488120-488234:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:487277-487704:-1:exon

GOLPH3L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: GOLPH3L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Golgi phosphoprotein 3-like
translation: MTTLTHRSRRAEGRSTDRKPTGEEDAAADRDLNDEDPDDSKDIRLTLMEEVLLLGLKDKEGYTSFWNDCISSGLRGGILIELAFRGRIRLEPPSMRKKRLLERKVLLKSDAPTGDVLLDETLRHIKATEAAESVQTWIELLTGETWNPFKLQYQLRNVRERVAKALVEKGILTTEKQNFLLFDMTTHPVSNGTEKQRLVRRLQESVLERWVNDPHRMDRRTLALLVLAHSSDVLENVFASLADDKYDVAMNRTKDLLDMDPEVEAAKAKGTEMVWAVLAAFNKS
SIO_010081: GOLPH3L
subclass of: SO_0000673
so part of: GOLPH3L
location: complement(join(487277..487704,488120..488234,488335..488466,491141..491320))
location: region:487277-491320:-1
so has part: feature:491141-491320:-1:exon
so has part: feature:488335-488466:-1:exon
so has part: feature:488120-488234:-1:exon
so has part: feature:487277-487704:-1:exon

XP_030330068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:491141-491320:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:488335-488466:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:488120-488234:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:487277-487704:-1:exon

HORMAD1
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: HORMAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(492782..501273)
location: region:492782-501273:-1
so has part: feature:492782-501273:-1:exon
subclass of: SO_0000010

115602794
type: Gene
SIO_000068: ncbigene

position:492782:-1
position: 492782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501273:-1
position: 501273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492782-501273:-1:exon

HORMAD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: HORMAD1
product: HORMA domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030474202.1
SIO_010081: HORMAD1
subclass of: SO_0000673
so part of: HORMAD1
location: complement(join(492782..493529,494523..494606,495343..495419,495963..496026,496717..496973,497560..497711,498381..498448,499338..499364,499466..499486,499881..499917,500167..500230,500547..500691,501052..501273))
location: region:492782-501273:-1
so has part: feature:501052-501273:-1:exon
so has part: feature:500547-500691:-1:exon
so has part: feature:500167-500230:-1:exon
so has part: feature:499881-499917:-1:exon
so has part: feature:499466-499486:-1:exon
so has part: feature:499338-499364:-1:exon
so has part: feature:498381-498448:-1:exon
so has part: feature:497560-497711:-1:exon
so has part: feature:496717-496973:-1:exon
so has part: feature:495963-496026:-1:exon
so has part: feature:495343-495419:-1:exon
so has part: feature:494523-494606:-1:exon
so has part: feature:492782-493529:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:501052-501273:-1:exon

position:501052:-1
position: 501052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:500547-500691:-1:exon

position:500547:-1
position: 500547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500691:-1
position: 500691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:500167-500230:-1:exon

position:500167:-1
position: 500167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500230:-1
position: 500230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:499881-499917:-1:exon

position:499881:-1
position: 499881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499917:-1
position: 499917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:499466-499486:-1:exon

position:499466:-1
position: 499466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499486:-1
position: 499486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:499338-499364:-1:exon

position:499338:-1
position: 499338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499364:-1
position: 499364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:498381-498448:-1:exon

position:498381:-1
position: 498381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498448:-1
position: 498448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:497560-497711:-1:exon

position:497560:-1
position: 497560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497711:-1
position: 497711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:496717-496973:-1:exon

position:496717:-1
position: 496717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496973:-1
position: 496973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:495963-496026:-1:exon

position:495963:-1
position: 495963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496026:-1
position: 496026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:495343-495419:-1:exon

position:495343:-1
position: 495343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:495419:-1
position: 495419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:494523-494606:-1:exon

position:494523:-1
position: 494523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494606:-1
position: 494606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:492782-493529:-1:exon

position:493529:-1
position: 493529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HORMAD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: HORMAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HORMA domain-containing protein 1
translation: MQCFINRQKSIREMATAQKQRNCASAVVFPTKIATEQQSLMLVKRLLAVAVSCITYLRGIFPESAYRTRYMDDVCVKILREDKNCPGSTQLVKWMLGCYDALQKKYLRMIVLAVYTHPEDPQTITECYHFKFKYTHNGPLLDFSSKDIRNNSTITCADTKKASILLIRKIYVLMQNLSPLPNDVCLTMKLFYYDEVTPPDYQPPGFKEGECEGMIFEGEPMYLNVGEVPTPFHMLKVKVTTEKQRMENVDKSILKSGETNMPLQMIRVDRDDPEEENHDMTENPILDNKEGDRNNVRSSEAQEPHLTCEEDEVKKTGGNQNLYVSNPQVDHLASKTSQLNVSESRTRSGKIFQASTVHQFELSSSQDVLPKRRKISEPKEQF
SIO_010081: HORMAD1
subclass of: SO_0000673
so part of: HORMAD1
location: complement(join(493449..493529,494523..494606,495343..495419,495963..496026,496717..496973,497560..497711,498381..498448,499338..499364,499466..499486,499881..499917,500167..500230,500547..500691,501052..501123))
location: region:493449-501123:-1
so has part: feature:501052-501123:-1:exon
so has part: feature:500547-500691:-1:exon
so has part: feature:500167-500230:-1:exon
so has part: feature:499881-499917:-1:exon
so has part: feature:499466-499486:-1:exon
so has part: feature:499338-499364:-1:exon
so has part: feature:498381-498448:-1:exon
so has part: feature:497560-497711:-1:exon
so has part: feature:496717-496973:-1:exon
so has part: feature:495963-496026:-1:exon
so has part: feature:495343-495419:-1:exon
so has part: feature:494523-494606:-1:exon
so has part: feature:493449-493529:-1:exon

XP_030330062.1
type: Protein
SIO_000068: ncbiprotein

position:493449:-1
position: 493449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501123:-1
position: 501123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501052-501123:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:500547-500691:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:500167-500230:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:499881-499917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499466-499486:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:499338-499364:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:498381-498448:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:497560-497711:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:496717-496973:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:495963-496026:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:495343-495419:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:494523-494606:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:493449-493529:-1:exon

KHDC4
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: KHDC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 514444..525200
location: region:514444-525200:1
so has part: feature:514444-525200:1:exon
subclass of: SO_0000010

115602798
type: Gene
SIO_000068: ncbigene

position:514444:1
position: 514444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525200:1
position: 525200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514444-525200:1:exon

KHDC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: KHDC4
product: KH domain containing 4, pre-mRNA splicing factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 182 long SRA reads, 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030474215.1
SIO_010081: KHDC4
subclass of: SO_0000673
so part of: KHDC4
location: join(514444..514748,514866..515103,516239..516361,516697..516776,517092..517144,517802..517965,518254..518465,519003..519063,519540..519597,519765..520018,520510..520665,521620..521732,522832..522923,523884..525200)
location: region:514444-525200:1
so has part: feature:514444-514748:1:exon
so has part: feature:514866-515103:1:exon
so has part: feature:516239-516361:1:exon
so has part: feature:516697-516776:1:exon
so has part: feature:517092-517144:1:exon
so has part: feature:517802-517965:1:exon
so has part: feature:518254-518465:1:exon
so has part: feature:519003-519063:1:exon
so has part: feature:519540-519597:1:exon
so has part: feature:519765-520018:1:exon
so has part: feature:520510-520665:1:exon
so has part: feature:521620-521732:1:exon
so has part: feature:522832-522923:1:exon
so has part: feature:523884-525200:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:514444-514748:1:exon

position:514748:1
position: 514748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:514866-515103:1:exon

position:514866:1
position: 514866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515103:1
position: 515103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:516239-516361:1:exon

position:516239:1
position: 516239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516361:1
position: 516361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:516697-516776:1:exon

position:516697:1
position: 516697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516776:1
position: 516776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:517092-517144:1:exon

position:517092:1
position: 517092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517144:1
position: 517144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:517802-517965:1:exon

position:517802:1
position: 517802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517965:1
position: 517965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:518254-518465:1:exon

position:518254:1
position: 518254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518465:1
position: 518465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:519003-519063:1:exon

position:519003:1
position: 519003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519063:1
position: 519063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:519540-519597:1:exon

position:519540:1
position: 519540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519597:1
position: 519597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:519765-520018:1:exon

position:519765:1
position: 519765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520018:1
position: 520018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:520510-520665:1:exon

position:520510:1
position: 520510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520665:1
position: 520665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:521620-521732:1:exon

position:521620:1
position: 521620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521732:1
position: 521732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:522832-522923:1:exon

position:522832:1
position: 522832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522923:1
position: 522923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:523884-525200:1:exon

position:523884:1
position: 523884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KHDC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: KHDC4
product: KH domain containing 4, pre-mRNA splicing factor, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 173 long SRA reads, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030474217.1
SIO_010081: KHDC4
subclass of: SO_0000673
so part of: KHDC4
location: join(514444..514748,514866..515103,516239..516361,516697..516776,517092..517144,517802..517965,518254..518465,519003..519063,519540..519597,519765..520018,520510..520665,521648..521732,522832..525200)
location: region:514444-525200:1
so has part: feature:514444-514748:1:exon
so has part: feature:514866-515103:1:exon
so has part: feature:516239-516361:1:exon
so has part: feature:516697-516776:1:exon
so has part: feature:517092-517144:1:exon
so has part: feature:517802-517965:1:exon
so has part: feature:518254-518465:1:exon
so has part: feature:519003-519063:1:exon
so has part: feature:519540-519597:1:exon
so has part: feature:519765-520018:1:exon
so has part: feature:520510-520665:1:exon
so has part: feature:521648-521732:1:exon
so has part: feature:522832-525200:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:514444-514748:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:514866-515103:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516239-516361:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:516697-516776:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:517092-517144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:517802-517965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:518254-518465:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:519003-519063:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:519540-519597:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:519765-520018:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:520510-520665:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:521648-521732:1:exon

position:521648:1
position: 521648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:522832-525200:1:exon

KHDC4
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2489341
gene: KHDC4
product: KH domain containing 4, pre-mRNA splicing factor, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 183 long SRA reads, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_003989708.1
SIO_010081: KHDC4
so part of: KHDC4
location: join(514444..514748,514866..515103,516239..516361,516697..516776,517092..517144,517802..517965,518254..518465,519003..519063,519540..519597,519765..520018,520510..520665,521648..521732,522832..522923,523884..525200)
location: region:514444-525200:1
so has part: feature:514444-514748:1:exon
so has part: feature:514866-515103:1:exon
so has part: feature:516239-516361:1:exon
so has part: feature:516697-516776:1:exon
so has part: feature:517092-517144:1:exon
so has part: feature:517802-517965:1:exon
so has part: feature:518254-518465:1:exon
so has part: feature:519003-519063:1:exon
so has part: feature:519540-519597:1:exon
so has part: feature:519765-520018:1:exon
so has part: feature:520510-520665:1:exon
so has part: feature:521648-521732:1:exon
so has part: feature:522832-522923:1:exon
so has part: feature:523884-525200:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:514444-514748:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:514866-515103:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516239-516361:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:516697-516776:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:517092-517144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:517802-517965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:518254-518465:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:519003-519063:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:519540-519597:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:519765-520018:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:520510-520665:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:521648-521732:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:522832-522923:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:523884-525200:1:exon

KHDC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: KHDC4
product: KH domain containing 4, pre-mRNA splicing factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 10 ESTs, 177 long SRA reads, 6 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030474214.1
SIO_010081: KHDC4
subclass of: SO_0000673
so part of: KHDC4
location: join(514449..514748,514866..515103,516233..516361,516697..516776,517092..517144,517802..517965,518254..518465,519003..519063,519540..519597,519765..520018,520510..520665,521620..521732,522832..522923,523884..525200)
location: region:514449-525200:1
so has part: feature:514449-514748:1:exon
so has part: feature:514866-515103:1:exon
so has part: feature:516233-516361:1:exon
so has part: feature:516697-516776:1:exon
so has part: feature:517092-517144:1:exon
so has part: feature:517802-517965:1:exon
so has part: feature:518254-518465:1:exon
so has part: feature:519003-519063:1:exon
so has part: feature:519540-519597:1:exon
so has part: feature:519765-520018:1:exon
so has part: feature:520510-520665:1:exon
so has part: feature:521620-521732:1:exon
so has part: feature:522832-522923:1:exon
so has part: feature:523884-525200:1:exon

position:514449:1
position: 514449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514449-514748:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:514866-515103:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516233-516361:1:exon

position:516233:1
position: 516233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:516697-516776:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:517092-517144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:517802-517965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:518254-518465:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:519003-519063:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:519540-519597:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:519765-520018:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:520510-520665:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:521620-521732:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:522832-522923:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:523884-525200:1:exon

KHDC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: KHDC4
product: KH domain containing 4, pre-mRNA splicing factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 168 long SRA reads, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030474216.1
SIO_010081: KHDC4
subclass of: SO_0000673
so part of: KHDC4
location: join(514449..514748,514866..515103,516233..516361,516697..516776,517092..517144,517802..517965,518254..518465,519003..519063,519540..519597,519765..520018,520510..520665,521648..521732,522832..525200)
location: region:514449-525200:1
so has part: feature:514449-514748:1:exon
so has part: feature:514866-515103:1:exon
so has part: feature:516233-516361:1:exon
so has part: feature:516697-516776:1:exon
so has part: feature:517092-517144:1:exon
so has part: feature:517802-517965:1:exon
so has part: feature:518254-518465:1:exon
so has part: feature:519003-519063:1:exon
so has part: feature:519540-519597:1:exon
so has part: feature:519765-520018:1:exon
so has part: feature:520510-520665:1:exon
so has part: feature:521648-521732:1:exon
so has part: feature:522832-525200:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:514449-514748:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:514866-515103:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516233-516361:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:516697-516776:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:517092-517144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:517802-517965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:518254-518465:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:519003-519063:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:519540-519597:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:519765-520018:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:520510-520665:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:521648-521732:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:522832-525200:1:exon

KHDC4
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2489341
gene: KHDC4
product: KH domain containing 4, pre-mRNA splicing factor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 174 long SRA reads, 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_003989707.1
SIO_010081: KHDC4
so part of: KHDC4
location: join(514449..514748,514866..515103,516233..516361,516697..516776,517092..517144,517802..517965,518254..518465,519003..519063,519540..519597,519765..520018,520510..520665,521648..521732,522832..522923,523884..525200)
location: region:514449-525200:1
so has part: feature:514449-514748:1:exon
so has part: feature:514866-515103:1:exon
so has part: feature:516233-516361:1:exon
so has part: feature:516697-516776:1:exon
so has part: feature:517092-517144:1:exon
so has part: feature:517802-517965:1:exon
so has part: feature:518254-518465:1:exon
so has part: feature:519003-519063:1:exon
so has part: feature:519540-519597:1:exon
so has part: feature:519765-520018:1:exon
so has part: feature:520510-520665:1:exon
so has part: feature:521648-521732:1:exon
so has part: feature:522832-522923:1:exon
so has part: feature:523884-525200:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:514449-514748:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:514866-515103:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516233-516361:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:516697-516776:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:517092-517144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:517802-517965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:518254-518465:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:519003-519063:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:519540-519597:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:519765-520018:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:520510-520665:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:521648-521732:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:522832-522923:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:523884-525200:1:exon

KHDC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: KHDC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: KH homology domain-containing protein 4 isoform X1
translation: MTRCEARGRWSRSRSRAGAMSAGGAAQRDAGAAAGRRSKWDQPGPAPAFLLPGTAPLPGRPFPGGGDGGSAVAGSESSAAPSGALDAAAAVAAKINAMLMAKGKLKPAPSTADKLQALGKGPATSKSKDDLVVAEVEINDVPLTCRNLLTRGQTQDEISRLSGAAVSTRGRFMTAEEKAKVGPGDRPLYLHVQGQTRELVDRAVNRIKEIITNGVVKAATGSSPTFNGATVTVYHQPAPITQLSPAVGQKPPFQSGMHYVQDKLFVGLEHAVPTFNVKEKVEGPGCSYLQHIQIETGAKVFLRGKGSGCIEPASGREAFEPMYIYISHPKPEGLAAAKKLCENLLQTVHAEYSRFVNQITTAVPLAGFTQPAAINSVPSQPSYYPSNGYQSGYPVVPPPQQPVQPPYGVPGIVPPAVPLAPGVLTTLPTGVPPVPTQYPISQVQPPASTGQSPLSGPFLPAAPVKTTMPTGTQPQVQPHPQGQKRRFTEELPDERESGLLGYQHGPIHMTNLGTGFSSQSELDGAGSKAASSSGKERERDRQLMPPPAFPVTGMKSDSEDRNGAGSLPGNHDHQAKKMKTAEKGFGLVAYAGDSSDEEEEHGGHKNASTFSQGWSLGYQYPSSQQRAKQQMPFWMAP
SIO_010081: KHDC4
subclass of: SO_0000673
so part of: KHDC4
location: join(514645..514748,514866..515103,516233..516361,516697..516776,517092..517144,517802..517965,518254..518465,519003..519063,519540..519597,519765..520018,520510..520665,521620..521732,522832..522923,523884..524083)
location: region:514645-524083:1
so has part: feature:514645-514748:1:exon
so has part: feature:514866-515103:1:exon
so has part: feature:516233-516361:1:exon
so has part: feature:516697-516776:1:exon
so has part: feature:517092-517144:1:exon
so has part: feature:517802-517965:1:exon
so has part: feature:518254-518465:1:exon
so has part: feature:519003-519063:1:exon
so has part: feature:519540-519597:1:exon
so has part: feature:519765-520018:1:exon
so has part: feature:520510-520665:1:exon
so has part: feature:521620-521732:1:exon
so has part: feature:522832-522923:1:exon
so has part: feature:523884-524083:1:exon

XP_030330074.1
type: Protein
SIO_000068: ncbiprotein

position:514645:1
position: 514645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524083:1
position: 524083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514645-514748:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:514866-515103:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516233-516361:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:516697-516776:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:517092-517144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:517802-517965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:518254-518465:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:519003-519063:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:519540-519597:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:519765-520018:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:520510-520665:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:521620-521732:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:522832-522923:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:523884-524083:1:exon

KHDC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: KHDC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: KH homology domain-containing protein 4 isoform X2
translation: MTRCEARGRWSRSRSRAGAMSAGGAAQRDAGAAAGRRSKWDQPGPAPAFLLPGTAPLPGRPFPGGGDGGSAVAGSESSAAPSGALDAAAAVAAKINAMLMAKGKLKPAPSTADKALGKGPATSKSKDDLVVAEVEINDVPLTCRNLLTRGQTQDEISRLSGAAVSTRGRFMTAEEKAKVGPGDRPLYLHVQGQTRELVDRAVNRIKEIITNGVVKAATGSSPTFNGATVTVYHQPAPITQLSPAVGQKPPFQSGMHYVQDKLFVGLEHAVPTFNVKEKVEGPGCSYLQHIQIETGAKVFLRGKGSGCIEPASGREAFEPMYIYISHPKPEGLAAAKKLCENLLQTVHAEYSRFVNQITTAVPLAGFTQPAAINSVPSQPSYYPSNGYQSGYPVVPPPQQPVQPPYGVPGIVPPAVPLAPGVLTTLPTGVPPVPTQYPISQVQPPASTGQSPLSGPFLPAAPVKTTMPTGTQPQVQPHPQGQKRRFTEELPDERESGLLGYQHGPIHMTNLGTGFSSQSELDGAGSKAASSSGKERERDRQLMPPPAFPVTGMKSDSEDRNGAGSLPGNHDHQAKKMKTAEKGFGLVAYAGDSSDEEEEHGGHKNASTFSQGWSLGYQYPSSQQRAKQQMPFWMAP
SIO_010081: KHDC4
subclass of: SO_0000673
so part of: KHDC4
location: join(514645..514748,514866..515103,516239..516361,516697..516776,517092..517144,517802..517965,518254..518465,519003..519063,519540..519597,519765..520018,520510..520665,521620..521732,522832..522923,523884..524083)
location: region:514645-524083:1
so has part: feature:514645-514748:1:exon
so has part: feature:514866-515103:1:exon
so has part: feature:516239-516361:1:exon
so has part: feature:516697-516776:1:exon
so has part: feature:517092-517144:1:exon
so has part: feature:517802-517965:1:exon
so has part: feature:518254-518465:1:exon
so has part: feature:519003-519063:1:exon
so has part: feature:519540-519597:1:exon
so has part: feature:519765-520018:1:exon
so has part: feature:520510-520665:1:exon
so has part: feature:521620-521732:1:exon
so has part: feature:522832-522923:1:exon
so has part: feature:523884-524083:1:exon

XP_030330075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:514645-514748:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:514866-515103:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516239-516361:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:516697-516776:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:517092-517144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:517802-517965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:518254-518465:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:519003-519063:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:519540-519597:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:519765-520018:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:520510-520665:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:521620-521732:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:522832-522923:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:523884-524083:1:exon

KHDC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: KHDC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: KH homology domain-containing protein 4 isoform X3
translation: MTRCEARGRWSRSRSRAGAMSAGGAAQRDAGAAAGRRSKWDQPGPAPAFLLPGTAPLPGRPFPGGGDGGSAVAGSESSAAPSGALDAAAAVAAKINAMLMAKGKLKPAPSTADKLQALGKGPATSKSKDDLVVAEVEINDVPLTCRNLLTRGQTQDEISRLSGAAVSTRGRFMTAEEKAKVGPGDRPLYLHVQGQTRELVDRAVNRIKEIITNGVVKAATGSSPTFNGATVTVYHQPAPITQLSPAVGQKPPFQSGMHYVQDKLFVGLEHAVPTFNVKEKVEGPGCSYLQHIQIETGAKVFLRGKGSGCIEPASGREAFEPMYIYISHPKPEGLAAAKKLCENLLQTVHAEYSRFVNQITTAVPLAGFTQPAAINSVPSQPSYYPSNGYQSGYPVVPPPQQPVQPPYGVPGIVPPAVPLAPGVLTTLPTGVPPVPTQYPISQVQPPASTGQSPLSGPFLPAAPVKTTMPTGTQPQVQPHPQGQKRRFTEELPDERESGLLGYQVQASPVRVNSMEPGRRQQVPQERRERGTGS
SIO_010081: KHDC4
subclass of: SO_0000673
so part of: KHDC4
location: join(514645..514748,514866..515103,516233..516361,516697..516776,517092..517144,517802..517965,518254..518465,519003..519063,519540..519597,519765..520018,520510..520665,521648..521732,522832..522839)
location: region:514645-522839:1
so has part: feature:514645-514748:1:exon
so has part: feature:514866-515103:1:exon
so has part: feature:516233-516361:1:exon
so has part: feature:516697-516776:1:exon
so has part: feature:517092-517144:1:exon
so has part: feature:517802-517965:1:exon
so has part: feature:518254-518465:1:exon
so has part: feature:519003-519063:1:exon
so has part: feature:519540-519597:1:exon
so has part: feature:519765-520018:1:exon
so has part: feature:520510-520665:1:exon
so has part: feature:521648-521732:1:exon
so has part: feature:522832-522839:1:exon

XP_030330076.1
type: Protein
SIO_000068: ncbiprotein

position:522839:1
position: 522839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514645-514748:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:514866-515103:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516233-516361:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:516697-516776:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:517092-517144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:517802-517965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:518254-518465:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:519003-519063:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:519540-519597:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:519765-520018:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:520510-520665:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:521648-521732:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:522832-522839:1:exon

KHDC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: KHDC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: KH homology domain-containing protein 4 isoform X4
translation: MTRCEARGRWSRSRSRAGAMSAGGAAQRDAGAAAGRRSKWDQPGPAPAFLLPGTAPLPGRPFPGGGDGGSAVAGSESSAAPSGALDAAAAVAAKINAMLMAKGKLKPAPSTADKALGKGPATSKSKDDLVVAEVEINDVPLTCRNLLTRGQTQDEISRLSGAAVSTRGRFMTAEEKAKVGPGDRPLYLHVQGQTRELVDRAVNRIKEIITNGVVKAATGSSPTFNGATVTVYHQPAPITQLSPAVGQKPPFQSGMHYVQDKLFVGLEHAVPTFNVKEKVEGPGCSYLQHIQIETGAKVFLRGKGSGCIEPASGREAFEPMYIYISHPKPEGLAAAKKLCENLLQTVHAEYSRFVNQITTAVPLAGFTQPAAINSVPSQPSYYPSNGYQSGYPVVPPPQQPVQPPYGVPGIVPPAVPLAPGVLTTLPTGVPPVPTQYPISQVQPPASTGQSPLSGPFLPAAPVKTTMPTGTQPQVQPHPQGQKRRFTEELPDERESGLLGYQVQASPVRVNSMEPGRRQQVPQERRERGTGS
SIO_010081: KHDC4
subclass of: SO_0000673
so part of: KHDC4
location: join(514645..514748,514866..515103,516239..516361,516697..516776,517092..517144,517802..517965,518254..518465,519003..519063,519540..519597,519765..520018,520510..520665,521648..521732,522832..522839)
location: region:514645-522839:1
so has part: feature:514645-514748:1:exon
so has part: feature:514866-515103:1:exon
so has part: feature:516239-516361:1:exon
so has part: feature:516697-516776:1:exon
so has part: feature:517092-517144:1:exon
so has part: feature:517802-517965:1:exon
so has part: feature:518254-518465:1:exon
so has part: feature:519003-519063:1:exon
so has part: feature:519540-519597:1:exon
so has part: feature:519765-520018:1:exon
so has part: feature:520510-520665:1:exon
so has part: feature:521648-521732:1:exon
so has part: feature:522832-522839:1:exon

XP_030330077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:514645-514748:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:514866-515103:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516239-516361:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:516697-516776:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:517092-517144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:517802-517965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:518254-518465:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:519003-519063:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:519540-519597:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:519765-520018:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:520510-520665:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:521648-521732:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:522832-522839:1:exon

LOC115602823
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115602823
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 518052..518180
location: region:518052-518180:1
so has part: feature:518052-518180:1:exon
subclass of: SO_0000979

115602823
type: Gene
SIO_000068: ncbigene

position:518052:1
position: 518052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518180:1
position: 518180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518052-518180:1:exon

LOC115602823
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2489341
nc RNA class: guide_RNA
gene: LOC115602823
product: small Cajal body-specific RNA 4
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00423
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003989717.1
SIO_010081: LOC115602823
subclass of: SO_0000673
so part of: LOC115602823
location: 518052..518180
location: region:518052-518180:1
so has part: feature:518052-518180:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:518052-518180:1:exon

RIT1
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: RIT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 525302..531767
location: region:525302-531767:1
so has part: feature:525302-531767:1:exon
subclass of: SO_0000010

115602799
type: Gene
SIO_000068: ncbigene

position:525302:1
position: 525302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531767:1
position: 531767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525302-531767:1:exon

RIT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: RIT1
product: Ras like without CAAX 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 124 long SRA reads, 47 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030474218.1
SIO_010081: RIT1
subclass of: SO_0000673
so part of: RIT1
location: join(525302..525545,525799..525855,526767..526840,527478..527669,529156..531767)
location: region:525302-531767:1
so has part: feature:525302-525545:1:exon
so has part: feature:525799-525855:1:exon
so has part: feature:526767-526840:1:exon
so has part: feature:527478-527669:1:exon
so has part: feature:529156-531767:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:525302-525545:1:exon

position:525545:1
position: 525545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:525799-525855:1:exon

position:525799:1
position: 525799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525855:1
position: 525855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:526767-526840:1:exon

position:526767:1
position: 526767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526840:1
position: 526840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:527478-527669:1:exon

position:527478:1
position: 527478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527669:1
position: 527669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:529156-531767:1:exon

position:529156:1
position: 529156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RIT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: RIT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTP-binding protein Rit1
translation: MDSGARPGGGAAPGQSREYKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLAQLRQVSKEEGSSLAREFNCPFFETSAAFRYYIDDVFHALVREIRRKEKEAVMAMEKKSKPKSSVWKRLKSPFRRKKDSVT
SIO_010081: RIT1
subclass of: SO_0000673
so part of: RIT1
location: join(525449..525545,525799..525855,526767..526840,527478..527669,529156..529386)
location: region:525449-529386:1
so has part: feature:525449-525545:1:exon
so has part: feature:525799-525855:1:exon
so has part: feature:526767-526840:1:exon
so has part: feature:527478-527669:1:exon
so has part: feature:529156-529386:1:exon

XP_030330078.1
type: Protein
SIO_000068: ncbiprotein

position:525449:1
position: 525449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529386:1
position: 529386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525449-525545:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:525799-525855:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526767-526840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:527478-527669:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:529156-529386:1:exon

SYT11
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: SYT11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(533977..544716)
location: region:533977-544716:-1
so has part: feature:533977-544716:-1:exon
subclass of: SO_0000010

115602802
type: Gene
SIO_000068: ncbigene

position:533977:-1
position: 533977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544716:-1
position: 544716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533977-544716:-1:exon

SYT11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: SYT11
product: synaptotagmin 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1005 long SRA reads, 15 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030474222.2
SIO_010081: SYT11
subclass of: SO_0000673
so part of: SYT11
location: complement(join(533977..537025,538175..538295,539821..540644,544104..544716))
location: region:533977-544716:-1
so has part: feature:544104-544716:-1:exon
so has part: feature:539821-540644:-1:exon
so has part: feature:538175-538295:-1:exon
so has part: feature:533977-537025:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:544104-544716:-1:exon

position:544104:-1
position: 544104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:539821-540644:-1:exon

position:539821:-1
position: 539821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540644:-1
position: 540644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:538175-538295:-1:exon

position:538175:-1
position: 538175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538295:-1
position: 538295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:533977-537025:-1:exon

position:537025:-1
position: 537025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SYT11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: SYT11
product: synaptotagmin 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1004 long SRA reads, 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030474221.2
SIO_010081: SYT11
subclass of: SO_0000673
so part of: SYT11
location: complement(join(533977..537025,538172..538295,539821..540644,544104..544716))
location: region:533977-544716:-1
so has part: feature:544104-544716:-1:exon
so has part: feature:539821-540644:-1:exon
so has part: feature:538172-538295:-1:exon
so has part: feature:533977-537025:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:544104-544716:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539821-540644:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:538172-538295:-1:exon

position:538172:-1
position: 538172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:533977-537025:-1:exon

SYT11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: SYT11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-11 isoform X2
translation: MAEITSVHPGFDVSPVVAGLIGATVLVVSVSVTVFVWTCCHQQAEKKHKTPPYKFIHMLKGISIYPETLSNKKKINRIRRDKNGTPKEAGRGNLLVDAAESGLIGSEKAPDGPNAAPHVDQLPIKVDYGDELSPDQSLTPGGSKTSSPSSPGDDVTLGELTFSVDYNFPKKALVVTIQEAHGLPVMDEHTQSSDPYIKMTILPDKRHRVKTRVLRKTLEPVFDETFTFYGIPYSQLQDLVLHFLVLSFDRFSRDDVIGEVMVPLAGVDPSTGKVHLTREILKRNIQKCISRGELQVSLSYQPVAQRMTVVVLKARHLPKMDITGLSDPYVKVNVYYGRKRIAKKKTHVKKCTLNPVFNESFIYDIPVDLLPDISIEFLVIDFDRTTKNEVVGRLILGAHSVTAAGVEHWREVCDNPRKPIAKWHSLSEY
SIO_010081: SYT11
subclass of: SO_0000673
so part of: SYT11
location: complement(join(536715..537025,538175..538295,539821..540644,544104..544137))
location: region:536715-544137:-1
so has part: feature:544104-544137:-1:exon
so has part: feature:539821-540644:-1:exon
so has part: feature:538175-538295:-1:exon
so has part: feature:536715-537025:-1:exon

XP_030330082.1
type: Protein
SIO_000068: ncbiprotein

position:536715:-1
position: 536715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544137:-1
position: 544137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544104-544137:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539821-540644:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:538175-538295:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536715-537025:-1:exon

SYT11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: SYT11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-11 isoform X1
translation: MAEITSVHPGFDVSPVVAGLIGATVLVVSVSVTVFVWTCCHQQAEKKHKTPPYKFIHMLKGISIYPETLSNKKKINRIRRDKNGTPKEAGRGNLLVDAAESGLIGSEKAPDGPNAAPHVDQLPIKVDYGDELSPDQSLTPGGSKTSSPSSPGDDVTLGELTFSVDYNFPKKALVVTIQEAHGLPVMDEHTQSSDPYIKMTILPDKRHRVKTRVLRKTLEPVFDETFTFYGIPYSQLQDLVLHFLVLSFDRFSRDDVIGEVMVPLAGVDPSTGKVHLTREILKRNIQKCISRGELQVSLSYQPVAQRMTVVVLKARHLPKMDITGLSGNPYVKVNVYYGRKRIAKKKTHVKKCTLNPVFNESFIYDIPVDLLPDISIEFLVIDFDRTTKNEVVGRLILGAHSVTAAGVEHWREVCDNPRKPIAKWHSLSEY
SIO_010081: SYT11
subclass of: SO_0000673
so part of: SYT11
location: complement(join(536715..537025,538172..538295,539821..540644,544104..544137))
location: region:536715-544137:-1
so has part: feature:544104-544137:-1:exon
so has part: feature:539821-540644:-1:exon
so has part: feature:538172-538295:-1:exon
so has part: feature:536715-537025:-1:exon

XP_030330081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:544104-544137:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539821-540644:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:538172-538295:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536715-537025:-1:exon

LOC115602804
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115602804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 544757..569634
location: region:544757-569634:1
so has part: feature:544757-569634:1:exon
subclass of: SO_0000010

115602804
type: Gene
SIO_000068: ncbigene

position:544757:1
position: 544757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569634:1
position: 569634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544757-569634:1:exon

LOC115602804
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115602804
product: GON-4-like protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 178 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030474234.1
SIO_010081: LOC115602804
subclass of: SO_0000673
so part of: LOC115602804
location: join(544757..545024,545064..545127,546638..546799,547149..547345,548201..548275,548599..548649,549023..549073,549762..549857,550072..550176,550994..551164,551820..552012,552451..552552,553203..553243,553536..553639,554695..554893,555747..555833,556538..556709,556919..557063,557243..557393,558012..558128,559144..560874,561330..561573,562080..562261,562406..562603,563144..563287,564052..564195,564551..564670,564953..565066,565533..565740,566946..567708,568145..568247,568787..569634)
location: region:544757-569634:1
so has part: feature:544757-545024:1:exon
so has part: feature:545064-545127:1:exon
so has part: feature:546638-546799:1:exon
so has part: feature:547149-547345:1:exon
so has part: feature:548201-548275:1:exon
so has part: feature:548599-548649:1:exon
so has part: feature:549023-549073:1:exon
so has part: feature:549762-549857:1:exon
so has part: feature:550072-550176:1:exon
so has part: feature:550994-551164:1:exon
so has part: feature:551820-552012:1:exon
so has part: feature:552451-552552:1:exon
so has part: feature:553203-553243:1:exon
so has part: feature:553536-553639:1:exon
so has part: feature:554695-554893:1:exon
so has part: feature:555747-555833:1:exon
so has part: feature:556538-556709:1:exon
so has part: feature:556919-557063:1:exon
so has part: feature:557243-557393:1:exon
so has part: feature:558012-558128:1:exon
so has part: feature:559144-560874:1:exon
so has part: feature:561330-561573:1:exon
so has part: feature:562080-562261:1:exon
so has part: feature:562406-562603:1:exon
so has part: feature:563144-563287:1:exon
so has part: feature:564052-564195:1:exon
so has part: feature:564551-564670:1:exon
so has part: feature:564953-565066:1:exon
so has part: feature:565533-565740:1:exon
so has part: feature:566946-567708:1:exon
so has part: feature:568145-568247:1:exon
so has part: feature:568787-569634:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:544757-545024:1:exon

position:545024:1
position: 545024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:545064-545127:1:exon

position:545064:1
position: 545064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545127:1
position: 545127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:546638-546799:1:exon

position:546638:1
position: 546638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546799:1
position: 546799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:547149-547345:1:exon

position:547149:1
position: 547149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547345:1
position: 547345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:548201-548275:1:exon

position:548201:1
position: 548201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548275:1
position: 548275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:548599-548649:1:exon

position:548599:1
position: 548599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548649:1
position: 548649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:549023-549073:1:exon

position:549023:1
position: 549023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549073:1
position: 549073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:549762-549857:1:exon

position:549762:1
position: 549762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549857:1
position: 549857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:550072-550176:1:exon

position:550072:1
position: 550072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550176:1
position: 550176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:550994-551164:1:exon

position:550994:1
position: 550994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551164:1
position: 551164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:551820-552012:1:exon

position:551820:1
position: 551820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552012:1
position: 552012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:552451-552552:1:exon

position:552451:1
position: 552451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552552:1
position: 552552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:553203-553243:1:exon

position:553203:1
position: 553203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553243:1
position: 553243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:553536-553639:1:exon

position:553536:1
position: 553536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553639:1
position: 553639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:554695-554893:1:exon

position:554695:1
position: 554695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554893:1
position: 554893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:555747-555833:1:exon

position:555747:1
position: 555747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555833:1
position: 555833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:556538-556709:1:exon

position:556538:1
position: 556538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556709:1
position: 556709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:556919-557063:1:exon

position:556919:1
position: 556919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557063:1
position: 557063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:557243-557393:1:exon

position:557243:1
position: 557243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557393:1
position: 557393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:558012-558128:1:exon

position:558012:1
position: 558012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558128:1
position: 558128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:559144-560874:1:exon

position:559144:1
position: 559144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560874:1
position: 560874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:561330-561573:1:exon

position:561330:1
position: 561330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561573:1
position: 561573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:562080-562261:1:exon

position:562080:1
position: 562080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562261:1
position: 562261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:562406-562603:1:exon

position:562406:1
position: 562406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562603:1
position: 562603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:563144-563287:1:exon

position:563144:1
position: 563144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563287:1
position: 563287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:564052-564195:1:exon

position:564052:1
position: 564052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564195:1
position: 564195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:564551-564670:1:exon

position:564551:1
position: 564551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564670:1
position: 564670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:564953-565066:1:exon

position:564953:1
position: 564953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565066:1
position: 565066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:565533-565740:1:exon

position:565533:1
position: 565533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565740:1
position: 565740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:566946-567708:1:exon

position:566946:1
position: 566946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567708:1
position: 567708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:568145-568247:1:exon

position:568145:1
position: 568145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568247:1
position: 568247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:568787-569634:1:exon

position:568787:1
position: 568787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115602804
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115602804
product: GON-4-like protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 169 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030474235.1
SIO_010081: LOC115602804
subclass of: SO_0000673
so part of: LOC115602804
location: join(544757..545024,545064..545127,546638..546799,547149..547345,548201..548275,548599..548649,549023..549073,549762..549857,550072..550176,550994..551164,551820..552012,552451..552552,553203..553243,553536..553636,554692..554893,555747..555833,556538..556709,556919..557063,557243..557393,558012..558128,559144..560874,561330..561573,562080..562261,562406..562603,563144..563287,564052..564195,564551..564670,565533..565740,566946..567708,568145..568247,568787..569634)
location: region:544757-569634:1
so has part: feature:544757-545024:1:exon
so has part: feature:545064-545127:1:exon
so has part: feature:546638-546799:1:exon
so has part: feature:547149-547345:1:exon
so has part: feature:548201-548275:1:exon
so has part: feature:548599-548649:1:exon
so has part: feature:549023-549073:1:exon
so has part: feature:549762-549857:1:exon
so has part: feature:550072-550176:1:exon
so has part: feature:550994-551164:1:exon
so has part: feature:551820-552012:1:exon
so has part: feature:552451-552552:1:exon
so has part: feature:553203-553243:1:exon
so has part: feature:553536-553636:1:exon
so has part: feature:554692-554893:1:exon
so has part: feature:555747-555833:1:exon
so has part: feature:556538-556709:1:exon
so has part: feature:556919-557063:1:exon
so has part: feature:557243-557393:1:exon
so has part: feature:558012-558128:1:exon
so has part: feature:559144-560874:1:exon
so has part: feature:561330-561573:1:exon
so has part: feature:562080-562261:1:exon
so has part: feature:562406-562603:1:exon
so has part: feature:563144-563287:1:exon
so has part: feature:564052-564195:1:exon
so has part: feature:564551-564670:1:exon
so has part: feature:565533-565740:1:exon
so has part: feature:566946-567708:1:exon
so has part: feature:568145-568247:1:exon
so has part: feature:568787-569634:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:544757-545024:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:545064-545127:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:546638-546799:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:547149-547345:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:548201-548275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:548599-548649:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:549023-549073:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:549762-549857:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:550072-550176:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:550994-551164:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:551820-552012:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:552451-552552:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:553203-553243:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:553536-553636:1:exon

position:553636:1
position: 553636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:554692-554893:1:exon

position:554692:1
position: 554692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:555747-555833:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:556538-556709:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:556919-557063:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:557243-557393:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:558012-558128:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:559144-560874:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:561330-561573:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:562080-562261:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:562406-562603:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:563144-563287:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:564052-564195:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:564551-564670:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:565533-565740:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:566946-567708:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:568145-568247:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:568787-569634:1:exon

LOC115602804
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115602804
product: GON-4-like protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 175 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030474233.1
SIO_010081: LOC115602804
subclass of: SO_0000673
so part of: LOC115602804
location: join(544758..545024,545064..545127,546638..546799,547149..547345,548201..548275,548599..548649,549023..549073,549762..549857,550072..550176,550994..551164,551820..552012,552451..552552,553203..553243,553536..553636,554692..554893,555747..555833,556538..556709,556919..557063,557243..557393,558012..558128,559144..560874,561330..561573,562080..562261,562406..562603,563144..563287,564052..564195,564551..564670,564953..565066,565533..565740,566946..567708,568145..568247,568787..569634)
location: region:544758-569634:1
so has part: feature:544758-545024:1:exon
so has part: feature:545064-545127:1:exon
so has part: feature:546638-546799:1:exon
so has part: feature:547149-547345:1:exon
so has part: feature:548201-548275:1:exon
so has part: feature:548599-548649:1:exon
so has part: feature:549023-549073:1:exon
so has part: feature:549762-549857:1:exon
so has part: feature:550072-550176:1:exon
so has part: feature:550994-551164:1:exon
so has part: feature:551820-552012:1:exon
so has part: feature:552451-552552:1:exon
so has part: feature:553203-553243:1:exon
so has part: feature:553536-553636:1:exon
so has part: feature:554692-554893:1:exon
so has part: feature:555747-555833:1:exon
so has part: feature:556538-556709:1:exon
so has part: feature:556919-557063:1:exon
so has part: feature:557243-557393:1:exon
so has part: feature:558012-558128:1:exon
so has part: feature:559144-560874:1:exon
so has part: feature:561330-561573:1:exon
so has part: feature:562080-562261:1:exon
so has part: feature:562406-562603:1:exon
so has part: feature:563144-563287:1:exon
so has part: feature:564052-564195:1:exon
so has part: feature:564551-564670:1:exon
so has part: feature:564953-565066:1:exon
so has part: feature:565533-565740:1:exon
so has part: feature:566946-567708:1:exon
so has part: feature:568145-568247:1:exon
so has part: feature:568787-569634:1:exon

position:544758:1
position: 544758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544758-545024:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:545064-545127:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:546638-546799:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:547149-547345:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:548201-548275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:548599-548649:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:549023-549073:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:549762-549857:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:550072-550176:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:550994-551164:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:551820-552012:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:552451-552552:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:553203-553243:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:553536-553636:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:554692-554893:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:555747-555833:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:556538-556709:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:556919-557063:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:557243-557393:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:558012-558128:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:559144-560874:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:561330-561573:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:562080-562261:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:562406-562603:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:563144-563287:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:564052-564195:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:564551-564670:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:564953-565066:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:565533-565740:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:566946-567708:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:568145-568247:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:568787-569634:1:exon

LOC115602804
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115602804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GON-4-like protein isoform X2
translation: MALSLKMLPCKKRRAAAGPQSPRDDGELPGGSSSAAGAADGGSSAKLAARAGAPPSSGPGVWRGPGEASLKGGKRPGTKEACAQLPEGLGAPEAAAEGKMPKLCTEVEVNAQRDLYLPENQSAVQESPGRSSLQVAVRNPAVMKPLKSTRAEEQDGEDIEKRKRRRKATKRKREGKSQEEEGSLSCDIKLDDTLDRTLEDGAKQHNLTVVNVRNILHEVITNEHVVAMMKAAISETEDIPLFEPKMTRSKLKEVVEKGVVIPTWNISPIKKANEVKPPQFVDIPLEEDDSSDEEYQPEDEDEDETAEESLLESDVESTASSPRGAKRSRTRRSSDEEGGTLCEMEKVTTPVVRHISAEVVPMGPPPPPKPKQNKDSTFMEKLHAVDEELASSPVCMDSYQSLDDSLIAFRTRSKRPLKDVPLGQLEAELRAPDITPDMYDPNTADDEEWKRWLGGLMNDDVENEDEADDDDDPEYNFLEDLDEPDTEDFRNDRAVRITKKEVNELMEELFETFQDEMGFSNMEDEGPEDEDNVTESRPNFNTPQALRFEEPLANLLNEQHRTVKEQLEQLRMKKSSIKPPQEMEKSKPQNEKPLQSLVLDSGQRKRLQQQMQQHVQLLTQIHLLASSNPALSSEASTTRMFLSELGNFARSSTLLRLSFNPKFQTMFQPCNLKGALQLIEDFHAQVQVDWSPRKAVKKSANEFPCLPKQVAWILATRRVFMYPELLPVCSLKANPPRDKIIFTKAEDNLLALGLKHFEGTEFPKPLISKYLLPTKTAHQLTVRIKNLNMNRAPDNIIRYYKKTKQLPVLFKCCEEIQPDEWKPPVEREEHRLPFWLKASLPSIQGELKQLAEDAREAPGSPDAEAVLLGTGKETSDTECDEKYPLLMPKGLVLTLKPLANRFSRRAWRRQRSSALKPVLIRPSPCLQPSTNTINIQRTVKLSQSEAPPSKVMVQIPRLIQPAPVMQPVPGVQPLNVPAVVGSGDGLEFQNVLSASHSDSRQAFSAAVPPALVSSNPVAIQPKLMLPALAGAKVRKPCVRKGYQRKKGAKSAPLIKTSPLIQPSPVILTVPAATVKVVNIGNGCNMIQPINTTVGRGTQAIPVTTLLVNPSTFPCPLNQPLVTSSIPSLIVSPNPVGLSASSVGENEEQLNLVPSCPAGNNKSTAEPKAEPAELYPSCSAVSPKKDCGTNPATANTGSQEKVNKSDCCSWTVVEGEENASESLSVDLLPHLEAPDETVKIESEESNDATKEVNPAQKRDLVCAEVKEEFMLDLGQELNMEAACSCSDGLKEMKKEHALCDKKGEEQRWALQSSPHGEQQMDAGGVAAPQVSSESPKNPSYTADVEAEFSSPLGRPEDSSSIDGQSVGTPAGPEAGGEREGQEEEEEDDFDDFTQDEDEEMSSASEESILSVPELQETMEKLTWLATKRRLSQEGDSEEENSQEENSEPEEEEEEEGEGIESLQKDDEICGDTSEEPKSAFPLAKAAPQVEAHRIPPGENMKAPGKSRSSHRTRNKRGRARASKDTSKLLLLFDEDILERDPLREQKDLAFAQAYLTRVREALQHVPGKYEDFLRVIYEFEISTDKRTAVDLYSTLQKLLHDWPQLLTDFAAFLLPEQALECGLFEEQQAFEKSRKFLRQLEICFAENPAHHQKIIKVLQSCTDCLPQEIAELKTQMWQLLKGHDHLQDEFSIFFDHLRPSASRMGDFEEINWTEEKEYEFDGFEEVSLPDVEEEDEPPKMHAASRTKKRKEIGGQNNDKEVEWVDGMKECSCSCHEGSSDLKLKKSKRRTCSHCSSKVCENKFYKNKDSQELAANHVQQESSPQPEGKDSGMSKEPAEESLENRDEGEDVQSRTKTGSRKAESLASGSHQEGKIVSSSHEPPEQAALPDTRVLEAGVGAGVRAAKDSDSCGSGPRWTQLQKAPLKLPQETKDCPCTVGREGLTQQQGSADASLGLSRDLLLPSRSATEKGLMGPSSSSGQSLCQTEGLHPDSAAAFGHAAK…
SIO_010081: LOC115602804
subclass of: SO_0000673
so part of: LOC115602804
location: join(544797..545024,545064..545127,546638..546799,547149..547345,548201..548275,548599..548649,549023..549073,549762..549857,550072..550176,550994..551164,551820..552012,552451..552552,553203..553243,553536..553639,554695..554893,555747..555833,556538..556709,556919..557063,557243..557393,558012..558128,559144..560874,561330..561573,562080..562261,562406..562603,563144..563287,564052..564195,564551..564670,564953..565066,565533..565740,566946..567708,568145..568247,568787..568936)
location: region:544797-568936:1
so has part: feature:544797-545024:1:exon
so has part: feature:545064-545127:1:exon
so has part: feature:546638-546799:1:exon
so has part: feature:547149-547345:1:exon
so has part: feature:548201-548275:1:exon
so has part: feature:548599-548649:1:exon
so has part: feature:549023-549073:1:exon
so has part: feature:549762-549857:1:exon
so has part: feature:550072-550176:1:exon
so has part: feature:550994-551164:1:exon
so has part: feature:551820-552012:1:exon
so has part: feature:552451-552552:1:exon
so has part: feature:553203-553243:1:exon
so has part: feature:553536-553639:1:exon
so has part: feature:554695-554893:1:exon
so has part: feature:555747-555833:1:exon
so has part: feature:556538-556709:1:exon
so has part: feature:556919-557063:1:exon
so has part: feature:557243-557393:1:exon
so has part: feature:558012-558128:1:exon
so has part: feature:559144-560874:1:exon
so has part: feature:561330-561573:1:exon
so has part: feature:562080-562261:1:exon
so has part: feature:562406-562603:1:exon
so has part: feature:563144-563287:1:exon
so has part: feature:564052-564195:1:exon
so has part: feature:564551-564670:1:exon
so has part: feature:564953-565066:1:exon
so has part: feature:565533-565740:1:exon
so has part: feature:566946-567708:1:exon
so has part: feature:568145-568247:1:exon
so has part: feature:568787-568936:1:exon

XP_030330094.1
type: Protein
SIO_000068: ncbiprotein

position:544797:1
position: 544797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568936:1
position: 568936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544797-545024:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:545064-545127:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:546638-546799:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:547149-547345:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:548201-548275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:548599-548649:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:549023-549073:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:549762-549857:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:550072-550176:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:550994-551164:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:551820-552012:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:552451-552552:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:553203-553243:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:553536-553639:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:554695-554893:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:555747-555833:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:556538-556709:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:556919-557063:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:557243-557393:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:558012-558128:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:559144-560874:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:561330-561573:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:562080-562261:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:562406-562603:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:563144-563287:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:564052-564195:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:564551-564670:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:564953-565066:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:565533-565740:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:566946-567708:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:568145-568247:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:568787-568936:1:exon

LOC115602804
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115602804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GON-4-like protein isoform X1
translation: MALSLKMLPCKKRRAAAGPQSPRDDGELPGGSSSAAGAADGGSSAKLAARAGAPPSSGPGVWRGPGEASLKGGKRPGTKEACAQLPEGLGAPEAAAEGKMPKLCTEVEVNAQRDLYLPENQSAVQESPGRSSLQVAVRNPAVMKPLKSTRAEEQDGEDIEKRKRRRKATKRKREGKSQEEEGSLSCDIKLDDTLDRTLEDGAKQHNLTVVNVRNILHEVITNEHVVAMMKAAISETEDIPLFEPKMTRSKLKEVVEKGVVIPTWNISPIKKANEVKPPQFVDIPLEEDDSSDEEYQPEDEDEDETAEESLLESDVESTASSPRGAKRSRTRRSSDEEGGTLCEMEKVTTPVVRHISAEVVPMGPPPPPKPKQNKDSTFMEKLHAVDEELASSPVCMDSYQSLDDSLIAFRTRSKRPLKDVPLGQLEAELRAPDITPDMYDPNTADDEEWKRWLGGLMNDDVENEDEADDDDDPEYNFLEDLDEPDTEDFRNDRAVRITKKEVNELMEELFETFQDEMGFSNMEDEGPEDEDNVTESRPNFNTPQALRFEEPLANLLNEQHRTVKEQLEQLRMKKSSIKPPQEMEKSKPQNEKPLQSLVLDSGQRKRLQQQMQQHVQLLTQIHLLASSNPALSSEASTTRMFLSELGNFARSSTLLRLSFNPKFQTMFQPCNLKGALQLIEDFHAQVQVDWSPRKAVKKSANEFPCLPKQVAWILATRRVFMYPELLPVCSLKANPPRDKIIFTKAEDNLLALGLKHFEGTEFPKPLISKYLLPTKTAHQLTVRIKNLNMNRAPDNIIRYYKKTKQLPVLFKCCEEIQPDEWKPPVEREEHRLPFWLKASLPSIQGELKQLAEDAREAPGSPDAEAVLLGTGKETSDTECDEKYPLLMPKGLVLTLKPLANRFSRRAWRRQRSSALKPVLIRPSPCLQPSTNTINIQRTVKLSQSEAPPSKVMVQIPRLIQPAPVMQPVPGVQPLNVPAVVGSGDGLEFQNVLSASHSDSRQAFSAAVPPALVSSNPVAIQPKLMLPALAGAKVRKPCVRKGYQRKKGAKSAPLIKTSPLIQPSPVILTVPAATVKVVNIGNGCNMIQPINTTVGRGTQAIPVTTLLVNPSTFPCPLNQPLVTSSIPSLIVSPNPVGLSASSVGENEEQLNLVPSCPAGNNKSTAEPKAEPAELYPSCSAVSPKKDCGTNPATANTGSQEKVNKSDCCSWTVVEGEENASESLSVDLLPHLEAPDETVKIESEESNDATKEVNPAQKRDLVCAEVKEEFMLDLGQELNMEAACSCSDGLKEMKKEHALCDKKGEEQRWALQSSPHGEQQMDAGGVAAPQVSSESPKNPSYTADVEAEFSSPLGRPEDSSSIDGQSVGTPAGPEAGGEREGQEEEEEDDFDDFTQDEDEEMSSASEESILSVPELQETMEKLTWLATKRRLSQEGDSEEENSQEENSEPEEEEEEEGEGIESLQKDDEICGDTSEEPKSAFPLAKAAPQVEAHRIPPGENMKAPGKSRSSHRTRNKRGRARASKDTSKLLLLFDEDILERDPLREQKDLAFAQAYLTRVREALQHVPGKYEDFLRVIYEFEISTDKRTAVDLYSTLQKLLHDWPQLLTDFAAFLLPEQALECGLFEEQQAFEKSRKFLRQLEICFAENPAHHQKIIKVLQSCTDCLPQEIAELKTQMWQLLKGHDHLQDEFSIFFDHLRPSASRMGDFEEINWTEEKEYEFDGFEEVSLPDVEEEDEPPKMHAASRTKKRKEIGGQNNDKEVEWVDGMKECSCSCHEGSSDLKLKKSKRRTCSHCSSKVCENKFYKNKDSQELAANHVQQESSPQPEGKDSGMSKEPAEESLENRDEGEDVQSRTKTGSRKAESLASGSHQEGKIVSSSHEPPEQAALPDTRVLEAGVGAGVRAAKDSDSCGSGPRWTQLQKAPLKLPQETKDCPCTVGREGLTQQQGSADASLGLSRDLLLPSRSATEKGLMGPSSSSGQSLCQTEGLHPDSAAAFGHAAK…
SIO_010081: LOC115602804
subclass of: SO_0000673
so part of: LOC115602804
location: join(544797..545024,545064..545127,546638..546799,547149..547345,548201..548275,548599..548649,549023..549073,549762..549857,550072..550176,550994..551164,551820..552012,552451..552552,553203..553243,553536..553636,554692..554893,555747..555833,556538..556709,556919..557063,557243..557393,558012..558128,559144..560874,561330..561573,562080..562261,562406..562603,563144..563287,564052..564195,564551..564670,564953..565066,565533..565740,566946..567708,568145..568247,568787..568936)
location: region:544797-568936:1
so has part: feature:544797-545024:1:exon
so has part: feature:545064-545127:1:exon
so has part: feature:546638-546799:1:exon
so has part: feature:547149-547345:1:exon
so has part: feature:548201-548275:1:exon
so has part: feature:548599-548649:1:exon
so has part: feature:549023-549073:1:exon
so has part: feature:549762-549857:1:exon
so has part: feature:550072-550176:1:exon
so has part: feature:550994-551164:1:exon
so has part: feature:551820-552012:1:exon
so has part: feature:552451-552552:1:exon
so has part: feature:553203-553243:1:exon
so has part: feature:553536-553636:1:exon
so has part: feature:554692-554893:1:exon
so has part: feature:555747-555833:1:exon
so has part: feature:556538-556709:1:exon
so has part: feature:556919-557063:1:exon
so has part: feature:557243-557393:1:exon
so has part: feature:558012-558128:1:exon
so has part: feature:559144-560874:1:exon
so has part: feature:561330-561573:1:exon
so has part: feature:562080-562261:1:exon
so has part: feature:562406-562603:1:exon
so has part: feature:563144-563287:1:exon
so has part: feature:564052-564195:1:exon
so has part: feature:564551-564670:1:exon
so has part: feature:564953-565066:1:exon
so has part: feature:565533-565740:1:exon
so has part: feature:566946-567708:1:exon
so has part: feature:568145-568247:1:exon
so has part: feature:568787-568936:1:exon

XP_030330093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:544797-545024:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:545064-545127:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:546638-546799:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:547149-547345:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:548201-548275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:548599-548649:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:549023-549073:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:549762-549857:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:550072-550176:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:550994-551164:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:551820-552012:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:552451-552552:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:553203-553243:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:553536-553636:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:554692-554893:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:555747-555833:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:556538-556709:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:556919-557063:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:557243-557393:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:558012-558128:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:559144-560874:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:561330-561573:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:562080-562261:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:562406-562603:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:563144-563287:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:564052-564195:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:564551-564670:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:564953-565066:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:565533-565740:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:566946-567708:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:568145-568247:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:568787-568936:1:exon

LOC115602804
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115602804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GON-4-like protein isoform X3
translation: MALSLKMLPCKKRRAAAGPQSPRDDGELPGGSSSAAGAADGGSSAKLAARAGAPPSSGPGVWRGPGEASLKGGKRPGTKEACAQLPEGLGAPEAAAEGKMPKLCTEVEVNAQRDLYLPENQSAVQESPGRSSLQVAVRNPAVMKPLKSTRAEEQDGEDIEKRKRRRKATKRKREGKSQEEEGSLSCDIKLDDTLDRTLEDGAKQHNLTVVNVRNILHEVITNEHVVAMMKAAISETEDIPLFEPKMTRSKLKEVVEKGVVIPTWNISPIKKANEVKPPQFVDIPLEEDDSSDEEYQPEDEDEDETAEESLLESDVESTASSPRGAKRSRTRRSSDEEGGTLCEMEKVTTPVVRHISAEVVPMGPPPPPKPKQNKDSTFMEKLHAVDEELASSPVCMDSYQSLDDSLIAFRTRSKRPLKDVPLGQLEAELRAPDITPDMYDPNTADDEEWKRWLGGLMNDDVENEDEADDDDDPEYNFLEDLDEPDTEDFRNDRAVRITKKEVNELMEELFETFQDEMGFSNMEDEGPEDEDNVTESRPNFNTPQALRFEEPLANLLNEQHRTVKEQLEQLRMKKSSIKPPQEMEKSKPQNEKPLQSLVLDSGQRKRLQQQMQQHVQLLTQIHLLASSNPALSSEASTTRMFLSELGNFARSSTLLRLSFNPKFQTMFQPCNLKGALQLIEDFHAQVQVDWSPRKAVKKSANEFPCLPKQVAWILATRRVFMYPELLPVCSLKANPPRDKIIFTKAEDNLLALGLKHFEGTEFPKPLISKYLLPTKTAHQLTVRIKNLNMNRAPDNIIRYYKKTKQLPVLFKCCEEIQPDEWKPPVEREEHRLPFWLKASLPSIQGELKQLAEDAREAPGSPDAEAVLLGTGKETSDTECDEKYPLLMPKGLVLTLKPLANRFSRRAWRRQRSSALKPVLIRPSPCLQPSTNTINIQRTVKLSQSEAPPSKVMVQIPRLIQPAPVMQPVPGVQPLNVPAVVGSGDGLEFQNVLSASHSDSRQAFSAAVPPALVSSNPVAIQPKLMLPALAGAKVRKPCVRKGYQRKKGAKSAPLIKTSPLIQPSPVILTVPAATVKVVNIGNGCNMIQPINTTVGRGTQAIPVTTLLVNPSTFPCPLNQPLVTSSIPSLIVSPNPVGLSASSVGENEEQLNLVPSCPAGNNKSTAEPKAEPAELYPSCSAVSPKKDCGTNPATANTGSQEKVNKSDCCSWTVVEGEENASESLSVDLLPHLEAPDETVKIESEESNDATKEVNPAQKRDLVCAEVKEEFMLDLGQELNMEAACSCSDGLKEMKKEHALCDKKGEEQRWALQSSPHGEQQMDAGGVAAPQVSSESPKNPSYTADVEAEFSSPLGRPEDSSSIDGQSVGTPAGPEAGGEREGQEEEEEDDFDDFTQDEDEEMSSASEESILSVPELQETMEKLTWLATKRRLSQEGDSEEENSQEENSEPEEEEEEEGEGIESLQKDDEICGDTSEEPKSAFPLAKAAPQVEAHRIPPGENMKAPGKSRSSHRTRNKRGRARASKDTSKLLLLFDEDILERDPLREQKDLAFAQAYLTRVREALQHVPGKYEDFLRVIYEFEISTDKRTAVDLYSTLQKLLHDWPQLLTDFAAFLLPEQALECGLFEEQQAFEKSRKFLRQLEICFAENPAHHQKIIKVLQSCTDCLPQEIAELKTQMWQLLKGHDHLQDEFSIFFDHLRPSASRMGDFEEINWTEEKEYEFDGFEEVSLPDVEEEDEPPKMHAASRTKKRKEIGGQNNDKVCENKFYKNKDSQELAANHVQQESSPQPEGKDSGMSKEPAEESLENRDEGEDVQSRTKTGSRKAESLASGSHQEGKIVSSSHEPPEQAALPDTRVLEAGVGAGVRAAKDSDSCGSGPRWTQLQKAPLKLPQETKDCPCTVGREGLTQQQGSADASLGLSRDLLLPSRSATEKGLMGPSSSSGQSLCQTEGLHPDSAAAFGHAAKSGVKELEGSPLPLEGKPEAKQGWITAGRKPALGKSCSS…
SIO_010081: LOC115602804
subclass of: SO_0000673
so part of: LOC115602804
location: join(544797..545024,545064..545127,546638..546799,547149..547345,548201..548275,548599..548649,549023..549073,549762..549857,550072..550176,550994..551164,551820..552012,552451..552552,553203..553243,553536..553636,554692..554893,555747..555833,556538..556709,556919..557063,557243..557393,558012..558128,559144..560874,561330..561573,562080..562261,562406..562603,563144..563287,564052..564195,564551..564670,565533..565740,566946..567708,568145..568247,568787..568936)
location: region:544797-568936:1
so has part: feature:544797-545024:1:exon
so has part: feature:545064-545127:1:exon
so has part: feature:546638-546799:1:exon
so has part: feature:547149-547345:1:exon
so has part: feature:548201-548275:1:exon
so has part: feature:548599-548649:1:exon
so has part: feature:549023-549073:1:exon
so has part: feature:549762-549857:1:exon
so has part: feature:550072-550176:1:exon
so has part: feature:550994-551164:1:exon
so has part: feature:551820-552012:1:exon
so has part: feature:552451-552552:1:exon
so has part: feature:553203-553243:1:exon
so has part: feature:553536-553636:1:exon
so has part: feature:554692-554893:1:exon
so has part: feature:555747-555833:1:exon
so has part: feature:556538-556709:1:exon
so has part: feature:556919-557063:1:exon
so has part: feature:557243-557393:1:exon
so has part: feature:558012-558128:1:exon
so has part: feature:559144-560874:1:exon
so has part: feature:561330-561573:1:exon
so has part: feature:562080-562261:1:exon
so has part: feature:562406-562603:1:exon
so has part: feature:563144-563287:1:exon
so has part: feature:564052-564195:1:exon
so has part: feature:564551-564670:1:exon
so has part: feature:565533-565740:1:exon
so has part: feature:566946-567708:1:exon
so has part: feature:568145-568247:1:exon
so has part: feature:568787-568936:1:exon

XP_030330095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:544797-545024:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:545064-545127:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:546638-546799:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:547149-547345:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:548201-548275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:548599-548649:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:549023-549073:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:549762-549857:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:550072-550176:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:550994-551164:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:551820-552012:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:552451-552552:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:553203-553243:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:553536-553636:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:554692-554893:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:555747-555833:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:556538-556709:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:556919-557063:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:557243-557393:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:558012-558128:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:559144-560874:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:561330-561573:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:562080-562261:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:562406-562603:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:563144-563287:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:564052-564195:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:564551-564670:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:565533-565740:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:566946-567708:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:568145-568247:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:568787-568936:1:exon

MSTO1
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: MSTO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(569548..573478)
location: region:569548-573478:-1
so has part: feature:569548-573478:-1:exon
subclass of: SO_0000010

115602806
type: Gene
SIO_000068: ncbigene

position:569548:-1
position: 569548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573478:-1
position: 573478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569548-573478:-1:exon

MSTO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: MSTO1
product: misato mitochondrial distribution and morphology regulator 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 130 long SRA reads, 21 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030474236.2
SIO_010081: MSTO1
subclass of: SO_0000673
so part of: MSTO1
location: complement(join(569548..569867,570100..570218,570322..570423,570615..570799,570934..571065,571422..571574,571691..571825,571918..572035,572157..572295,572700..572748,572859..572934,573013..573067,573168..573291,573373..573478))
location: region:569548-573478:-1
so has part: feature:573373-573478:-1:exon
so has part: feature:573168-573291:-1:exon
so has part: feature:573013-573067:-1:exon
so has part: feature:572859-572934:-1:exon
so has part: feature:572700-572748:-1:exon
so has part: feature:572157-572295:-1:exon
so has part: feature:571918-572035:-1:exon
so has part: feature:571691-571825:-1:exon
so has part: feature:571422-571574:-1:exon
so has part: feature:570934-571065:-1:exon
so has part: feature:570615-570799:-1:exon
so has part: feature:570322-570423:-1:exon
so has part: feature:570100-570218:-1:exon
so has part: feature:569548-569867:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:573373-573478:-1:exon

position:573373:-1
position: 573373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:573168-573291:-1:exon

position:573168:-1
position: 573168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573291:-1
position: 573291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:573013-573067:-1:exon

position:573013:-1
position: 573013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573067:-1
position: 573067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:572859-572934:-1:exon

position:572859:-1
position: 572859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572934:-1
position: 572934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:572700-572748:-1:exon

position:572700:-1
position: 572700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572748:-1
position: 572748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:572157-572295:-1:exon

position:572157:-1
position: 572157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572295:-1
position: 572295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:571918-572035:-1:exon

position:571918:-1
position: 571918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572035:-1
position: 572035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:571691-571825:-1:exon

position:571691:-1
position: 571691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571825:-1
position: 571825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:571422-571574:-1:exon

position:571422:-1
position: 571422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571574:-1
position: 571574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:570934-571065:-1:exon

position:570934:-1
position: 570934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571065:-1
position: 571065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:570615-570799:-1:exon

position:570615:-1
position: 570615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570799:-1
position: 570799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:570322-570423:-1:exon

position:570322:-1
position: 570322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570423:-1
position: 570423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:570100-570218:-1:exon

position:570100:-1
position: 570100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570218:-1
position: 570218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:569548-569867:-1:exon

position:569867:-1
position: 569867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MSTO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: MSTO1
product: misato mitochondrial distribution and morphology regulator 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 125 long SRA reads, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030474237.2
SIO_010081: MSTO1
subclass of: SO_0000673
so part of: MSTO1
location: complement(join(569549..569867,570100..570218,570322..570420,570615..570799,570934..571065,571422..571574,571691..571825,571918..572035,572157..572295,572700..572748,572859..572934,573013..573067,573168..573291,573373..573478))
location: region:569549-573478:-1
so has part: feature:573373-573478:-1:exon
so has part: feature:573168-573291:-1:exon
so has part: feature:573013-573067:-1:exon
so has part: feature:572859-572934:-1:exon
so has part: feature:572700-572748:-1:exon
so has part: feature:572157-572295:-1:exon
so has part: feature:571918-572035:-1:exon
so has part: feature:571691-571825:-1:exon
so has part: feature:571422-571574:-1:exon
so has part: feature:570934-571065:-1:exon
so has part: feature:570615-570799:-1:exon
so has part: feature:570322-570420:-1:exon
so has part: feature:570100-570218:-1:exon
so has part: feature:569549-569867:-1:exon

position:569549:-1
position: 569549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573373-573478:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:573168-573291:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:573013-573067:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:572859-572934:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:572700-572748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:572157-572295:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:571918-572035:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:571691-571825:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:571422-571574:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:570934-571065:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:570615-570799:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:570322-570420:-1:exon

position:570420:-1
position: 570420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:570100-570218:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:569549-569867:-1:exon

MSTO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: MSTO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein misato homolog 1 isoform X2
translation: MPGEAVTLQLGPYAGSAGAHWWGLQAAALRRPAEAAELRSSALLRTGQAPGGREIHTPRLVALELKGGAGALRTGGAGAEAPVTWNGAVAAYLERGPSGASAPRDTGSRTEDASSGSTGSAGAAARGPAPAPSPLAAAQEVPSGSNVQLWSDHLNVQLHPKSLYVTRQYMHDGDCGCLEAFAQGERLLQDPACMEELEDRLHYFVEECDYLQGFQVLCDLHNGFSGVGAKVTELLCDEYSGKGILSWGLTPAMSNVGDSQKNVYRLMNTALGIVHLSTHSSLFCPLSLSGSLGLKPQPPVTFPYINYDASLNYHSSAILAAALDTLTVPYRLSSSQGSMLHLAETLNFSGRKVVAAWASVPFPALHGSSLPDAFCTHQQDVPWKLLASCREQKGSSCFAQSVVLRGVCKDRHSSSPGRQPPSPLHACESTEHILQHYLHTVFPGAFSTSHVLEQPCYTLPPYPQFFSPLLSRQGFLLDKPPTHSPAAVESIPVLAALQAAPVLHTLLYGLYKDLQKVNTRRWASFFSAGVEQDDFQEALHKLRTLSQCYETEFEADESEDEADSD
SIO_010081: MSTO1
subclass of: SO_0000673
so part of: MSTO1
location: complement(join(569629..569867,570100..570218,570322..570420,570615..570799,570934..571065,571422..571574,571691..571825,571918..572035,572157..572295,572700..572748,572859..572934,573013..573067,573168..573291,573373..573447))
location: region:569629-573447:-1
so has part: feature:573373-573447:-1:exon
so has part: feature:573168-573291:-1:exon
so has part: feature:573013-573067:-1:exon
so has part: feature:572859-572934:-1:exon
so has part: feature:572700-572748:-1:exon
so has part: feature:572157-572295:-1:exon
so has part: feature:571918-572035:-1:exon
so has part: feature:571691-571825:-1:exon
so has part: feature:571422-571574:-1:exon
so has part: feature:570934-571065:-1:exon
so has part: feature:570615-570799:-1:exon
so has part: feature:570322-570420:-1:exon
so has part: feature:570100-570218:-1:exon
so has part: feature:569629-569867:-1:exon

XP_030330097.1
type: Protein
SIO_000068: ncbiprotein

position:569629:-1
position: 569629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573447:-1
position: 573447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573373-573447:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:573168-573291:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:573013-573067:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:572859-572934:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:572700-572748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:572157-572295:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:571918-572035:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:571691-571825:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:571422-571574:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:570934-571065:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:570615-570799:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:570322-570420:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:570100-570218:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:569629-569867:-1:exon

MSTO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: MSTO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein misato homolog 1 isoform X1
translation: MPGEAVTLQLGPYAGSAGAHWWGLQAAALRRPAEAAELRSSALLRTGQAPGGREIHTPRLVALELKGGAGALRTGGAGAEAPVTWNGAVAAYLERGPSGASAPRDTGSRTEDASSGSTGSAGAAARGPAPAPSPLAAAQEVPSGSNVQLWSDHLNVQLHPKSLYVTRQYMHDGDCGCLEAFAQGERLLQDPACMEELEDRLHYFVEECDYLQGFQVLCDLHNGFSGVGAKVTELLCDEYSGKGILSWGLTPAMSNVGDSQKNVYRLMNTALGIVHLSTHSSLFCPLSLSGSLGLKPQPPVTFPYINYDASLNYHSSAILAAALDTLTVPYRLSSSQGSMLHLAETLNFSGRKVVAAWASVPFPALHGSSLPDAFCTHQQDVPWKLLASCREQKGSSCFAQSVVLRGVCKDRHSSSSPGRQPPSPLHACESTEHILQHYLHTVFPGAFSTSHVLEQPCYTLPPYPQFFSPLLSRQGFLLDKPPTHSPAAVESIPVLAALQAAPVLHTLLYGLYKDLQKVNTRRWASFFSAGVEQDDFQEALHKLRTLSQCYETEFEADESEDEADSD
SIO_010081: MSTO1
subclass of: SO_0000673
so part of: MSTO1
location: complement(join(569629..569867,570100..570218,570322..570423,570615..570799,570934..571065,571422..571574,571691..571825,571918..572035,572157..572295,572700..572748,572859..572934,573013..573067,573168..573291,573373..573447))
location: region:569629-573447:-1
so has part: feature:573373-573447:-1:exon
so has part: feature:573168-573291:-1:exon
so has part: feature:573013-573067:-1:exon
so has part: feature:572859-572934:-1:exon
so has part: feature:572700-572748:-1:exon
so has part: feature:572157-572295:-1:exon
so has part: feature:571918-572035:-1:exon
so has part: feature:571691-571825:-1:exon
so has part: feature:571422-571574:-1:exon
so has part: feature:570934-571065:-1:exon
so has part: feature:570615-570799:-1:exon
so has part: feature:570322-570423:-1:exon
so has part: feature:570100-570218:-1:exon
so has part: feature:569629-569867:-1:exon

XP_030330096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:573373-573447:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:573168-573291:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:573013-573067:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:572859-572934:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:572700-572748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:572157-572295:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:571918-572035:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:571691-571825:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:571422-571574:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:570934-571065:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:570615-570799:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:570322-570423:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:570100-570218:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:569629-569867:-1:exon

LOC115602809
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115602809
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 573535..577774
location: region:573535-577774:1
so has part: feature:573535-577774:1:exon
subclass of: SO_0000011

115602809
type: Gene
SIO_000068: ncbigene

position:573535:1
position: 573535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577774:1
position: 577774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573535-577774:1:exon

LOC115602809
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2489341
nc RNA class: lncRNA
gene: LOC115602809
product: uncharacterized LOC115602809
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003989711.1
SIO_010081: LOC115602809
subclass of: SO_0000673
so part of: LOC115602809
location: join(573535..573697,577577..577774)
location: region:573535-577774:1
so has part: feature:573535-573697:1:exon
so has part: feature:577577-577774:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:573535-573697:1:exon

position:573697:1
position: 573697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:577577-577774:1:exon

position:577577:1
position: 577577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DAP3
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: DAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(573558..585660)
location: region:573558-585660:-1
so has part: feature:573558-585660:-1:exon
subclass of: SO_0000010

115602807
type: Gene
SIO_000068: ncbigene

position:573558:-1
position: 573558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585660:-1
position: 585660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573558-585660:-1:exon

DAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: DAP3
product: death associated protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 172 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030474238.1
SIO_010081: DAP3
subclass of: SO_0000673
so part of: DAP3
location: complement(join(573558..573683,573780..573897,574122..574211,574675..574734,575096..575254,575813..575893,576028..576158,576572..576664,577039..577147,577658..577759,580785..580907,583961..584007,584678..584833,585574..585660))
location: region:573558-585660:-1
so has part: feature:585574-585660:-1:exon
so has part: feature:584678-584833:-1:exon
so has part: feature:583961-584007:-1:exon
so has part: feature:580785-580907:-1:exon
so has part: feature:577658-577759:-1:exon
so has part: feature:577039-577147:-1:exon
so has part: feature:576572-576664:-1:exon
so has part: feature:576028-576158:-1:exon
so has part: feature:575813-575893:-1:exon
so has part: feature:575096-575254:-1:exon
so has part: feature:574675-574734:-1:exon
so has part: feature:574122-574211:-1:exon
so has part: feature:573780-573897:-1:exon
so has part: feature:573558-573683:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:585574-585660:-1:exon

position:585574:-1
position: 585574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:584678-584833:-1:exon

position:584678:-1
position: 584678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584833:-1
position: 584833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:583961-584007:-1:exon

position:583961:-1
position: 583961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584007:-1
position: 584007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:580785-580907:-1:exon

position:580785:-1
position: 580785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580907:-1
position: 580907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:577658-577759:-1:exon

position:577658:-1
position: 577658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577759:-1
position: 577759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:577039-577147:-1:exon

position:577039:-1
position: 577039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577147:-1
position: 577147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:576572-576664:-1:exon

position:576572:-1
position: 576572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576664:-1
position: 576664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:576028-576158:-1:exon

position:576028:-1
position: 576028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576158:-1
position: 576158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:575813-575893:-1:exon

position:575813:-1
position: 575813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575893:-1
position: 575893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:575096-575254:-1:exon

position:575096:-1
position: 575096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575254:-1
position: 575254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:574675-574734:-1:exon

position:574675:-1
position: 574675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574734:-1
position: 574734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:574122-574211:-1:exon

position:574122:-1
position: 574122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574211:-1
position: 574211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:573780-573897:-1:exon

position:573780:-1
position: 573780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573897:-1
position: 573897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:573558-573683:-1:exon

position:573683:-1
position: 573683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: DAP3
product: death associated protein 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030474240.1
SIO_010081: DAP3
subclass of: SO_0000673
so part of: DAP3
location: complement(join(573558..573683,573780..573844,574122..574211,574626..574734,575096..575254,575813..575893,576028..576158,576572..576664,577039..577147,577658..577759,580785..580907,583961..584007,584678..584833,585574..585660))
location: region:573558-585660:-1
so has part: feature:585574-585660:-1:exon
so has part: feature:584678-584833:-1:exon
so has part: feature:583961-584007:-1:exon
so has part: feature:580785-580907:-1:exon
so has part: feature:577658-577759:-1:exon
so has part: feature:577039-577147:-1:exon
so has part: feature:576572-576664:-1:exon
so has part: feature:576028-576158:-1:exon
so has part: feature:575813-575893:-1:exon
so has part: feature:575096-575254:-1:exon
so has part: feature:574626-574734:-1:exon
so has part: feature:574122-574211:-1:exon
so has part: feature:573780-573844:-1:exon
so has part: feature:573558-573683:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:585574-585660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:584678-584833:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:583961-584007:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:580785-580907:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:577658-577759:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:577039-577147:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:576572-576664:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:576028-576158:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:575813-575893:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:575096-575254:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:574626-574734:-1:exon

position:574626:-1
position: 574626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:574122-574211:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:573780-573844:-1:exon

position:573844:-1
position: 573844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:573558-573683:-1:exon

DAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: DAP3
product: death associated protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 151 long SRA reads, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030474239.1
SIO_010081: DAP3
subclass of: SO_0000673
so part of: DAP3
location: complement(join(573558..573683,573780..573897,574122..574211,574675..574734,575096..575254,575813..575893,576028..576158,576572..576664,577039..577147,577658..577759,580785..580907,583961..584007,585574..585624))
location: region:573558-585624:-1
so has part: feature:585574-585624:-1:exon
so has part: feature:583961-584007:-1:exon
so has part: feature:580785-580907:-1:exon
so has part: feature:577658-577759:-1:exon
so has part: feature:577039-577147:-1:exon
so has part: feature:576572-576664:-1:exon
so has part: feature:576028-576158:-1:exon
so has part: feature:575813-575893:-1:exon
so has part: feature:575096-575254:-1:exon
so has part: feature:574675-574734:-1:exon
so has part: feature:574122-574211:-1:exon
so has part: feature:573780-573897:-1:exon
so has part: feature:573558-573683:-1:exon

position:585624:-1
position: 585624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585574-585624:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:583961-584007:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:580785-580907:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577658-577759:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:577039-577147:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576572-576664:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:576028-576158:-1:exon