Strigops habroptila isolate Jane chromosome 16, bStrHab1.2.pri, whole genome shotgun sequence.
type: Entry
definition: Strigops habroptila isolate Jane chromosome 16, bStrHab1.2.pri, whole genome shotgun sequence.
sequence version: NC_044292.2
sequence date: 2020-03-26
sequence: sequence
division: CON
label: NC_044292.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA558775
dblink: SAMN09948751
keyword: WGS
keyword: RefSeq
source: Strigops habroptila (Kakapo)
organism: Strigops habroptila
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Psittaciformes; Psittacidae; Strigops.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM013778.2.\nOn Mar 26, 2020 this sequence version replaced NC_044292.1.\nAssembly name: bStrHab1.2.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/03/04. The original whole-genome shotgun project has the\naccession RXXE00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 08-NOV-2019\nAssembly Method :: FALCON v. 5.1.1; FALCON unzip v. 1.0.2;\n scaff10X v. git 4.28.2018; Bionano Solve\n DLS v. 3.2.1; Salsa2 HiC v. 2.0;\n smrtanalysis Arrow polishing & gap\n filling v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes v. 1.2.0;\n purge_haplotigs v. bit 7.10.2018; gEVAL\n manual curation v. 2019-11-08\nAssembly Name :: bStrHab1.2.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 76.1x\nSequencing Technology :: PacBio RSII; 10X Genomics linked reads;\n Bionano Genomics DLS; Arima Genomics HiC\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Strigops habroptila Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 8419051
topology: linear
so has quality: SO_0000987
location: 1..8419051
location: region:1-8419051:1
RO_0002162: 2489341

NC_044292
type: RefSeq
SIO_000068: refseq

PRJNA558775
type: BioProject
SIO_000068: bioproject

SAMN09948751
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8419051:1
position: 8419051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-8419051:1:source
so part of: sequence
organism: Strigops habroptila
mol type: genomic DNA
isolate: Jane
chromosome: 16
sex: female
tissue type: blood in lysis buffer or EtOH
country: New Zealand: Anchor Island
lat lon: 45.757406 S 166.504927 E
collection date: 2013-04-13
collected by: Tim Raemaekers, Daryl Eason, Andrew Digby of Department of Conservation, New Zealand

2489341
type: Taxonomy
SIO_000068: taxonomy

LOC115617398
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115617398
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 39961..60649
location: region:39961-60649:1
so has part: feature:39961-60649:1:exon
subclass of: SO_0000010

115617398
type: Gene
SIO_000068: ncbigene

position:39961:1
position: 39961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60649:1
position: 60649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39961-60649:1:exon

LOC115617398
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115617398
product: tumor necrosis factor receptor superfamily member 8-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030507830.1
SIO_010081: LOC115617398
subclass of: SO_0000673
so part of: LOC115617398
location: join(39961..40032,49531..49621,53116..53241,53659..53814,53916..54009,54252..54532,54759..54869,55409..55456,56619..56644,58431..58635,60119..60649)
location: region:39961-60649:1
so has part: feature:39961-40032:1:exon
so has part: feature:49531-49621:1:exon
so has part: feature:53116-53241:1:exon
so has part: feature:53659-53814:1:exon
so has part: feature:53916-54009:1:exon
so has part: feature:54252-54532:1:exon
so has part: feature:54759-54869:1:exon
so has part: feature:55409-55456:1:exon
so has part: feature:56619-56644:1:exon
so has part: feature:58431-58635:1:exon
so has part: feature:60119-60649:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39961-40032:1:exon

position:40032:1
position: 40032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:49531-49621:1:exon

position:49531:1
position: 49531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49621:1
position: 49621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:53116-53241:1:exon

position:53116:1
position: 53116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53241:1
position: 53241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:53659-53814:1:exon

position:53659:1
position: 53659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53814:1
position: 53814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:53916-54009:1:exon

position:53916:1
position: 53916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54009:1
position: 54009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:54252-54532:1:exon

position:54252:1
position: 54252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54532:1
position: 54532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:54759-54869:1:exon

position:54759:1
position: 54759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54869:1
position: 54869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:55409-55456:1:exon

position:55409:1
position: 55409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55456:1
position: 55456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:56619-56644:1:exon

position:56619:1
position: 56619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56644:1
position: 56644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:58431-58635:1:exon

position:58431:1
position: 58431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58635:1
position: 58635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:60119-60649:1:exon

position:60119:1
position: 60119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115617398
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115617398
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 8-like
translation: MAACNLALGLCILLLLQDIHTAPQTSLTPSHTCDTLQNWFYDETSRSCCYQCPSGYVKKKACPRDPGEDCIRCGPEQYVNEAFQKPRCDACVSCTKESDLVEKEPCSFNSSRVCECRPGLFCQTPVLNTCIRCQQHTVCKPGFGVKVRGTSTNDVTCEECLSGTFSDQNSSTDICKPHTNCAKLNKVVLSKGNATHDQVCLDQLPTYLTPNSLSMRFNNETNNSDLRRFEENLVTVTGILVSATMPENPSTTAEEKAWAGTFPTSVKGDTTMEGLVLWGVVLSVIVLLVGMLSFWKLKVCKKQIFILKGKPHLHSIRSCKSRLKSQGHDLTNKCTIILATDSGPEEKELIDRTLPLETNNNLVSRTENAHSPPLSLTDVTLSSGNAPDCPIDSQVRDHTNNRIEKIYIMKADTVIVGSISEVPSGKNCTARECESNVDAEENMEEELAMHYPEQETESFPWNDVMVPVEEEGKEFHHPTTATEK
SIO_010081: LOC115617398
subclass of: SO_0000673
so part of: LOC115617398
location: join(39961..40032,49531..49621,53116..53241,53659..53814,53916..54009,54252..54532,54759..54869,55409..55456,56619..56644,58431..58635,60119..60363)
location: region:39961-60363:1
so has part: feature:39961-40032:1:exon
so has part: feature:49531-49621:1:exon
so has part: feature:53116-53241:1:exon
so has part: feature:53659-53814:1:exon
so has part: feature:53916-54009:1:exon
so has part: feature:54252-54532:1:exon
so has part: feature:54759-54869:1:exon
so has part: feature:55409-55456:1:exon
so has part: feature:56619-56644:1:exon
so has part: feature:58431-58635:1:exon
so has part: feature:60119-60363:1:exon

XP_030363690.1
type: Protein
SIO_000068: ncbiprotein

position:60363:1
position: 60363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39961-40032:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49531-49621:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:53116-53241:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:53659-53814:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:53916-54009:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:54252-54532:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:54759-54869:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:55409-55456:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:56619-56644:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:58431-58635:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:60119-60363:1:exon

LOC115617460
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115617460
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 64240..79912
location: region:64240-79912:1
so has part: feature:64240-79912:1:exon
subclass of: SO_0000010

115617460
type: Gene
SIO_000068: ncbigene

position:64240:1
position: 64240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79912:1
position: 79912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64240-79912:1:exon

LOC115617460
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115617460
product: tumor necrosis factor receptor superfamily member 1B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 long SRA reads, 2 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030507974.1
SIO_010081: LOC115617460
subclass of: SO_0000673
so part of: LOC115617460
location: join(64240..64599,69747..69849,71955..72083,72764..72913,73822..73915,74000..74193,74960..75034,75985..76022,76474..76744,77302..79912)
location: region:64240-79912:1
so has part: feature:64240-64599:1:exon
so has part: feature:69747-69849:1:exon
so has part: feature:71955-72083:1:exon
so has part: feature:72764-72913:1:exon
so has part: feature:73822-73915:1:exon
so has part: feature:74000-74193:1:exon
so has part: feature:74960-75034:1:exon
so has part: feature:75985-76022:1:exon
so has part: feature:76474-76744:1:exon
so has part: feature:77302-79912:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64240-64599:1:exon

position:64599:1
position: 64599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:69747-69849:1:exon

position:69747:1
position: 69747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69849:1
position: 69849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:71955-72083:1:exon

position:71955:1
position: 71955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72083:1
position: 72083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:72764-72913:1:exon

position:72764:1
position: 72764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72913:1
position: 72913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:73822-73915:1:exon

position:73822:1
position: 73822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73915:1
position: 73915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:74000-74193:1:exon

position:74000:1
position: 74000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74193:1
position: 74193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:74960-75034:1:exon

position:74960:1
position: 74960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75034:1
position: 75034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:75985-76022:1:exon

position:75985:1
position: 75985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76022:1
position: 76022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:76474-76744:1:exon

position:76474:1
position: 76474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76744:1
position: 76744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:77302-79912:1:exon

position:77302:1
position: 77302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115617460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115617460
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 1B-like
translation: MGISWQIAGAPFLSGQLPTPLRNPRVTLLRGGSALLPPAAGRCWDRDRVCGRVPAAARCPALGGGMGLRWALLAALLHAAGGRTEVSAGGGRGRPPPLLGPSYRLQSRGEPGIVGTAGVVDYSLPYTPESAQCKDPNTEFYEELLNKCCSQCPPGQYKTESCSHAVDTKCSPCRPNTYTEIWNLSPQCFACSPPCRKGFVQNQTCTPSQDRICSCSPNEYCISKIYKYCRICKVHKKCGKGYRVSRRGTDSTDTECKPCPPGTFSHEESYDTSCVPHKVCKSVAVPGNSINDTVCRDSGTAVATVLPNTVLNLLLTQSSASNRPEIITRPVTLNSASDNSHIIGSVAGPLLLFLIISILGYCLVSKKKAPVFSPPATEADLPFSPTEKQCDKKVRNTGSQNSSSSEHDEQHLLRTSGSSSSFLNNPTGSARISVISNKNNEKKKTEGFQQQHSAAEGCKCHSRDRHNSASSGHSGNGGTQVNVTCIVKVCSPDCSSQFPEQTSSTSMDYGNAPYYSPTGEETPLSREEHLLNKETEIQTSVENEDNLLQGSLPEEKKFPLGIEDEGMKTS
SIO_010081: LOC115617460
subclass of: SO_0000673
so part of: LOC115617460
location: join(64240..64599,69747..69849,71955..72083,72764..72913,73822..73915,74000..74193,74960..75034,75985..76022,76474..76744,77302..77600)
location: region:64240-77600:1
so has part: feature:64240-64599:1:exon
so has part: feature:69747-69849:1:exon
so has part: feature:71955-72083:1:exon
so has part: feature:72764-72913:1:exon
so has part: feature:73822-73915:1:exon
so has part: feature:74000-74193:1:exon
so has part: feature:74960-75034:1:exon
so has part: feature:75985-76022:1:exon
so has part: feature:76474-76744:1:exon
so has part: feature:77302-77600:1:exon

XP_030363834.1
type: Protein
SIO_000068: ncbiprotein

position:77600:1
position: 77600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64240-64599:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:69747-69849:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:71955-72083:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:72764-72913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:73822-73915:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:74000-74193:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:74960-75034:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:75985-76022:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:76474-76744:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:77302-77600:1:exon

VPS13D
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: VPS13D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 80138..184725
location: region:80138-184725:1
so has part: feature:80138-184725:1:exon
subclass of: SO_0000010

115617522
type: Gene
SIO_000068: ncbigene

position:80138:1
position: 80138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184725:1
position: 184725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80138-184725:1:exon

VPS13D
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2489341
gene: VPS13D
product: vacuolar protein sorting 13 homolog D, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 43 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_003994621.1
SIO_010081: VPS13D
so part of: VPS13D
location: join(80138..80343,82789..82953,83842..83919,84141..84331,84671..84751,85942..86058,86277..86381,86726..86896,87867..87967,88584..88752,90161..90253,90769..90979,91464..91643,92073..92203,92966..93038,93553..93717,94894..95024,95831..95963,97472..99694,100056..100201,100952..101986,102877..102967,103524..103650,104582..104762,105610..105792,106189..106266,108284..108506,108951..109161,109295..109466,109897..110009,110563..110772,112765..113030,113194..113327,113989..114144,114695..114920,115749..115823,116567..116773,117190..117279,118420..118560,119766..119888,120534..120608,122992..123097,123776..123928,124541..124676,125684..125731,126425..126575,127206..127416,128518..128765,129402..129593,129752..129878,130808..130950,131516..131646,131894..132069,132205..132328,133162..133397,134134..134242,134894..135054,135561..135669,136353..136532,136796..136912,137248..137397,138332..138481,139306..139402,141077..141225,143717..143851,144186..144353,157647..157779,159660..159855,176750..176881,180634..180874,181652..181863,184065..184725)
location: region:80138-184725:1
so has part: feature:80138-80343:1:exon
so has part: feature:82789-82953:1:exon
so has part: feature:83842-83919:1:exon
so has part: feature:84141-84331:1:exon
so has part: feature:84671-84751:1:exon
so has part: feature:85942-86058:1:exon
so has part: feature:86277-86381:1:exon
so has part: feature:86726-86896:1:exon
so has part: feature:87867-87967:1:exon
so has part: feature:88584-88752:1:exon
so has part: feature:90161-90253:1:exon
so has part: feature:90769-90979:1:exon
so has part: feature:91464-91643:1:exon
so has part: feature:92073-92203:1:exon
so has part: feature:92966-93038:1:exon
so has part: feature:93553-93717:1:exon
so has part: feature:94894-95024:1:exon
so has part: feature:95831-95963:1:exon
so has part: feature:97472-99694:1:exon
so has part: feature:100056-100201:1:exon
so has part: feature:100952-101986:1:exon
so has part: feature:102877-102967:1:exon
so has part: feature:103524-103650:1:exon
so has part: feature:104582-104762:1:exon
so has part: feature:105610-105792:1:exon
so has part: feature:106189-106266:1:exon
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position:184065:1
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VPS13D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: VPS13D
product: vacuolar protein sorting 13 homolog D, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 146 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030508138.1
SIO_010081: VPS13D
subclass of: SO_0000673
so part of: VPS13D
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VPS13D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: VPS13D
product: vacuolar protein sorting 13 homolog D, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 161 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030508137.1
SIO_010081: VPS13D
subclass of: SO_0000673
so part of: VPS13D
location: join(80138..80343,82789..82953,83842..83919,84141..84331,84671..84751,85942..86058,86277..86381,86726..86896,87867..87967,88584..88752,90161..90253,90769..90979,91464..91643,92073..92203,92966..93038,93553..93717,94894..95024,95831..95963,97472..99694,100056..100201,100952..101986,102877..102967,103524..103650,104582..104762,105610..105792,106189..106266,108284..108506,108951..109161,109295..109466,109897..110009,110563..110772,112765..113030,113194..113327,113989..114144,114695..114920,115749..115823,116567..116773,117190..117279,118420..118560,119766..119888,120534..120608,122992..123097,123776..123928,124541..124676,125684..125731,126425..126575,127206..127416,128518..128765,129402..129593,129752..129878,130808..130950,131516..131646,131894..132069,132205..132328,133162..133397,134134..134242,134894..135054,135561..135669,136353..136532,136796..136912,137248..137397,138332..138481,139306..139402,141077..141225,143717..143851,144186..144353,157647..157779,159660..159855,176750..176881,180634..180874,181652..182770)
location: region:80138-182770:1
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VPS13D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: VPS13D
product: vacuolar protein sorting 13 homolog D, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 163 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030508139.1
SIO_010081: VPS13D
subclass of: SO_0000673
so part of: VPS13D
location: join(80138..80343,82789..82953,83842..83919,84141..84331,84671..84751,85942..86058,86277..86381,86726..86896,87867..87967,88584..88752,90161..90253,90769..90979,91464..91643,92073..92203,92966..93038,93553..93717,94894..95024,95831..95963,97472..99694,100056..100201,100952..101986,102877..102967,103524..103650,104582..104762,105610..105792,106189..106266,108284..108506,108951..109161,109295..109466,109897..110009,110563..110772,112765..113030,113194..113327,113989..114144,114695..114920,115749..115823,116567..116773,117190..117279,118420..118560,119766..119888,122992..123097,123776..123928,124541..124676,125684..125731,126425..126575,127206..127416,128518..128765,129402..129593,129752..129878,130808..130950,131516..131646,131894..132069,132205..132328,133162..133397,134134..134242,134894..135054,135561..135669,136353..136532,136796..136912,137248..137397,138332..138481,139306..139402,141077..141225,143717..143851,144186..144353,157647..157779,159660..159855,176750..176881,180634..180874,181652..182770)
location: region:80138-182770:1
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VPS13D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: VPS13D
product: vacuolar protein sorting 13 homolog D, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 161 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030508140.1
SIO_010081: VPS13D
subclass of: SO_0000673
so part of: VPS13D
location: join(80138..80343,82789..82953,83842..83919,84141..84331,84671..84751,85942..86058,86277..86381,86726..86896,87867..87967,88584..88752,90161..90253,90769..90979,91464..91643,92073..92203,92966..93038,93553..93717,94894..95024,95831..95963,97472..99694,100056..100201,100952..101986,102877..102967,103524..103650,104582..104762,105610..105792,108284..108506,108951..109161,109295..109466,109897..110009,110563..110772,112765..113030,113194..113327,113989..114144,114695..114920,115749..115823,116567..116773,117190..117279,118420..118560,119766..119888,120534..120608,122992..123097,123776..123928,124541..124676,125684..125731,126425..126575,127206..127416,128518..128765,129402..129593,129752..129878,130808..130950,131516..131646,131894..132069,132205..132328,133162..133397,134134..134242,134894..135054,135561..135669,136353..136532,136796..136912,137248..137397,138332..138481,139306..139402,141077..141225,143717..143851,144186..144353,157647..157779,159660..159855,176750..176881,180634..180874,181652..182770)
location: region:80138-182770:1
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VPS13D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: VPS13D
product: vacuolar protein sorting 13 homolog D, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 162 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030508141.1
SIO_010081: VPS13D
subclass of: SO_0000673
so part of: VPS13D
location: join(80138..80343,82789..82953,83842..83919,84141..84331,84671..84751,85942..86058,86277..86381,86726..86896,87867..87967,88584..88752,90161..90253,90769..90979,91464..91643,92073..92203,92966..93038,93553..93717,94894..95024,95831..95963,97472..99694,100056..100201,100952..101986,102877..102967,103524..103650,104582..104762,105610..105792,108287..108506,108951..109161,109295..109466,109897..110009,110563..110772,112765..113030,113194..113327,113989..114144,114695..114920,115749..115823,116567..116773,117190..117279,118420..118560,119766..119888,120534..120608,122992..123097,123776..123928,124541..124676,125684..125731,126425..126575,127206..127416,128518..128765,129402..129593,129752..129878,130808..130950,131516..131646,131894..132069,132205..132328,133162..133397,134134..134242,134894..135054,135561..135669,136353..136532,136796..136912,137248..137397,138332..138481,139306..139402,141077..141225,143717..143851,144186..144353,157647..157779,159660..159855,176750..176881,180634..180874,181652..182770)
location: region:80138-182770:1
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position:108287:1
position: 108287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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VPS13D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: VPS13D
product: vacuolar protein sorting 13 homolog D, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 164 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030508143.1
SIO_010081: VPS13D
subclass of: SO_0000673
so part of: VPS13D
location: join(80138..80343,82789..82953,83842..83919,84141..84331,84671..84751,85942..86058,86277..86381,86726..86896,87867..87967,88584..88752,90161..90253,90769..90979,91464..91643,92073..92203,92966..93038,93553..93717,94894..95024,95831..95963,97472..99694,100056..100201,100952..101986,102877..102967,103524..103650,104582..104762,105610..105792,108287..108506,108951..109161,109295..109466,109897..110009,110563..110772,112765..113030,113194..113327,113989..114144,114695..114920,115749..115823,116567..116773,117190..117279,118420..118560,119766..119888,122992..123097,123776..123928,124541..124676,125684..125731,126425..126575,127206..127416,128518..128765,129402..129593,129752..129878,130808..130950,131516..131646,131894..132069,132205..132328,133162..133397,134134..134242,134894..135054,135561..135669,136353..136532,136796..136912,137248..137397,138332..138481,139306..139402,141077..141225,143717..143851,144186..144353,157647..157779,159660..159855,176750..176881,180634..180874,181652..182770)
location: region:80138-182770:1
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VPS13D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: VPS13D
product: vacuolar protein sorting 13 homolog D, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 160 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030508145.1
SIO_010081: VPS13D
subclass of: SO_0000673
so part of: VPS13D
location: join(80138..80343,82789..82953,83842..83919,84141..84331,84671..84751,85942..86058,86277..86381,86726..86896,87867..87967,88584..88752,90161..90253,90769..90979,91464..91643,92073..92203,92966..93038,93553..93717,97472..99694,100056..100201,100952..101986,102877..102967,103524..103650,104582..104762,105610..105792,106189..106266,108284..108506,108951..109161,109295..109466,109897..110009,110563..110772,112765..113030,113194..113327,113989..114144,114695..114920,115749..115823,116567..116773,117190..117279,118420..118560,119766..119888,120534..120608,122992..123097,123776..123928,124541..124676,125684..125731,126425..126575,127206..127416,128518..128765,129402..129593,129752..129878,130808..130950,131516..131646,131894..132069,132205..132328,133162..133397,134134..134242,134894..135054,135561..135669,136353..136532,136796..136912,137248..137397,138332..138481,139306..139402,141077..141225,143717..143851,144186..144353,157647..157779,159660..159855,176750..176881,180634..180874,181652..182770)
location: region:80138-182770:1
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VPS13D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: VPS13D
product: vacuolar protein sorting 13 homolog D, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 158 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030508142.1
SIO_010081: VPS13D
subclass of: SO_0000673
so part of: VPS13D
location: join(80138..80343,82789..82953,83842..83919,84141..84331,85942..86058,86277..86381,86726..86896,87867..87967,88584..88752,90161..90253,90769..90979,91464..91643,92073..92203,92966..93038,93553..93717,94894..95024,95831..95963,97472..99694,100056..100201,100952..101986,102877..102967,103524..103650,104582..104762,105610..105792,106189..106266,108284..108506,108951..109161,109295..109466,109897..110009,110563..110772,112765..113030,113194..113327,113989..114144,114695..114920,115749..115823,116567..116773,117190..117279,118420..118560,119766..119888,120534..120608,122992..123097,123776..123928,124541..124676,125684..125731,126425..126575,127206..127416,128518..128765,129402..129593,129752..129878,130808..130950,131516..131646,131894..132069,132205..132328,133162..133397,134134..134242,134894..135054,135561..135669,136353..136532,136796..136912,137248..137397,138332..138481,139306..139402,141077..141225,143717..143851,144186..144353,157647..157779,159660..159855,176750..176881,180634..180874,181652..182770)
location: region:80138-182770:1
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so has part: feature:136353-136532:1:exon
so has part: feature:136796-136912:1:exon
so has part: feature:137248-137397:1:exon
so has part: feature:138332-138481:1:exon
so has part: feature:139306-139402:1:exon
so has part: feature:141077-141225:1:exon
so has part: feature:143717-143851:1:exon
so has part: feature:144186-144353:1:exon
so has part: feature:157647-157779:1:exon
so has part: feature:159660-159855:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:80138-80343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82789-82953:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:83842-83919:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:84141-84331:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:85942-86058:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86277-86381:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:86726-86896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:87867-87967:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:88584-88752:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:90161-90253:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:90769-90979:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:91464-91643:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:92073-92203:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:92966-93038:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:93553-93717:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:94894-95024:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:95831-95963:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:97472-99694:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:100056-100201:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:100952-101986:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:102877-102967:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:103524-103650:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:104582-104762:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:105610-105792:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:106189-106266:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:108284-108506:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:108951-109161:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:109295-109466:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:109897-110009:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:110563-110772:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:112765-113030:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:113194-113327:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:113989-114144:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:114695-114920:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:115749-115823:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:116567-116773:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:117190-117279:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:118420-118560:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:119766-119888:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:120534-120608:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:122992-123097:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:123776-123928:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:124541-124676:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:125684-125731:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:126425-126575:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:127206-127416:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:128518-128765:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:129402-129593:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:129752-129878:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:130808-130950:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:131516-131646:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:131894-132069:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:132205-132328:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:133162-133397:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:134134-134242:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:134894-135054:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:135561-135669:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:136353-136532:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:136796-136912:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:137248-137397:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:138332-138481:1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:139306-139402:1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:141077-141225:1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:143717-143851:1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:144186-144353:1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:157647-157779:1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:159660-159855:1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:176750-176881:1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:180634-180874:1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:181652-182770:1:exon

VPS13D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: VPS13D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 13D isoform X1
translation: MLEGLVAWVLNTYLGKYVNNLNTDQLSVALLKGAVELENLPLKKDALKELELPFEVKAGFIGKITLQIPFYRPHVDPWVISVSKLHLIGAPEKKEDFDEEKEKLQEREHKKALLLALEEKWKTEQQQKGESYWYSVTASVVTRIVENIELKIQDVHLRFEDGVTNPLQPFAFGICIKKVSMQNAVFEPVEKLMRKKQLDVADFSVYWDTNCTLLGDLPPGQLQEAMDKSMESRDHNYIMEPVCTSSLLKRNCSKEPLRSRQTPRLECDIQLETIPLKLSQMQYQQIMGFLKELDRKERQLKFRKWRPKVSVTANCREWWIFALNANLSEIREQRQRSTWEFVLHRAQDAVSYTDLYYTKLKGEPLSAAEQAEMHRIEDEQTYEELKILYEIVHDKIHDLAESIKEPLPYSPGGSPTAESAHGSSTGMLQYLQSWFPGWGGWYGYAQQTYEGEPFEGLLTDPKEQWNPEDILGTDEFFDPAADASSMNTFTKRDHIFAKLNLQLQGGSFTLLHKNKKVVHAEETAFMQLEFSGVKILAESLPRRNSSLLRVQLGGLFLRDLATEGTIFPVLVFPNPQKEVGCMSSFGLQNLSSEMTNQNTDPDAPVFEMLYERNPIHSTFERRLEVSTRPLNIIYNPQAIKKVADFFYKGRVHTSGFGYQSELEARVAEAARRQYNKLKMQTKAEIRQTIDRLLVGDFIENSKSWTVCLDISAPQVIFPDDFKFVDPVLVVVDLGRILLTNSQEESKRSTDTFSSEVNELSDEEYKTPLATPPNTPPPESDTNSGMKMSEFTGLEISEEHLQAHLMSKKMYERYTLSFMDLQIMVGRVKDNWKHVQDSDVGPTHVVEKFNVHLQLERRLIYTSDPKYPGAVLSGSLPDLKIHINEDKILALKNCCAQLSTSETKSSDALHLGKDKIFAEVDQLGSLHDSVMNLTQSVVMLEQHTREVLVESQLLLAEFRVNCMQLGVESNGRYISVLKVFGTNAHFVKRPYDAEVSLTVHGLLLVDTMQTYGTDFDLLMASHKNLSFDVPTGSLRGSRAQSPVCGPRDARPIDAASLAERCTTASSTSSGNNGKDQESLIKLEYQFVSAECPSMNLDSSLQVISVQVNNLDIILNPETIVELICFLQKSFPKEKEDSSPQPLITDLEKDWREQETFQSTYVQNTEVAVDIHWLNILLLRTVGMTNGEKYGRKIATASIGGTKVNVSMCSKFDVNGSLGCLHLMDLTQDSVKNQYVVSIGNTVRYENLIGDVDYLESLFFRLDDGNSLPDALSFTFTEKSKEECSLNLKMASLHYNHSAKFLKELTLSMDELEENFRSMLKSAASKVTTVLATKTAEYSEMVSLFDTTPRSRDVANLEDNEGYGFGSQPLKIDTIKLILNVNIESPIVSIPRKPGSSELLVGHLGQISIQNFVPGEDESTSDRLQVEIKDIKMYSLNSSQFTSKKEPASEVSRGLHSSSGPASISSQDEPHFTRHDFFESLHKGHAFHILNNTTIQFKLEKIPLEKDITFPLSNEDFGISSIMKIEGKFVNPLQVVLAKHVYEQVLQTLDNLIYSEDLNRFPTTSVSSTCHSSPSASLHSTGTEFSSERKENGLFSHSSFNSVPNKLVAIRETKSFTQIQANFRISELQVQLSGDLTLGAQGLVSLKFQDFEVEFAKDHPQTLSIQIALRSLLMEDLLEKNPDSLYKNLMVSRGAPKPSSLAHKEYLSQSCPSVSNVEYPDMPRSLPSHMEEAPNVFQLYQRPVCASRKKQKDDADSEYPLTPPPSPSADRSKLSCGKSNFDDSLVHINIFLVDRKHPEFSSRYNRINRSVDVDFNCLDVLITLQTWVVILDFFGIGSTADNHAMKLQPEDTQQAVKSEINTLSASQAQEPVNTKLDLKVHSLSLVLNKTTSELAKASVSKLAAHLEVIEGDLALQGSIGSLSLSDLTAHGEFYRERFTTSGEEALIFQVFKYGRPDPLLLRECDIRVTLQMASVQYVHTQRFQAEVVSFIQHFTQLQDVLG…
SIO_010081: VPS13D
subclass of: SO_0000673
so part of: VPS13D
location: join(82857..82953,83842..83919,84141..84331,84671..84751,85942..86058,86277..86381,86726..86896,87867..87967,88584..88752,90161..90253,90769..90979,91464..91643,92073..92203,92966..93038,93553..93717,94894..95024,95831..95963,97472..99694,100056..100201,100952..101986,102877..102967,103524..103650,104582..104762,105610..105792,106189..106266,108284..108506,108951..109161,109295..109466,109897..110009,110563..110772,112765..113030,113194..113327,113989..114144,114695..114920,115749..115823,116567..116773,117190..117279,118420..118560,119766..119888,120534..120608,122992..123097,123776..123928,124541..124676,125684..125731,126425..126575,127206..127416,128518..128765,129402..129593,129752..129878,130808..130950,131516..131646,131894..132069,132205..132328,133162..133397,134134..134242,134894..135054,135561..135669,136353..136532,136796..136912,137248..137397,138332..138481,139306..139402,141077..141225,143717..143851,144186..144353,157647..157779,159660..159855,176750..176881,180634..180874,181652..181783)
location: region:82857-181783:1
so has part: feature:82857-82953:1:exon
so has part: feature:83842-83919:1:exon
so has part: feature:84141-84331:1:exon
so has part: feature:84671-84751:1:exon
so has part: feature:85942-86058:1:exon
so has part: feature:86277-86381:1:exon
so has part: feature:86726-86896:1:exon
so has part: feature:87867-87967:1:exon
so has part: feature:88584-88752:1:exon
so has part: feature:90161-90253:1:exon
so has part: feature:90769-90979:1:exon
so has part: feature:91464-91643:1:exon
so has part: feature:92073-92203:1:exon
so has part: feature:92966-93038:1:exon
so has part: feature:93553-93717:1:exon
so has part: feature:94894-95024:1:exon
so has part: feature:95831-95963:1:exon
so has part: feature:97472-99694:1:exon
so has part: feature:100056-100201:1:exon
so has part: feature:100952-101986:1:exon
so has part: feature:102877-102967:1:exon
so has part: feature:103524-103650:1:exon
so has part: feature:104582-104762:1:exon
so has part: feature:105610-105792:1:exon
so has part: feature:106189-106266:1:exon
so has part: feature:108284-108506:1:exon
so has part: feature:108951-109161:1:exon
so has part: feature:109295-109466:1:exon
so has part: feature:109897-110009:1:exon
so has part: feature:110563-110772:1:exon
so has part: feature:112765-113030:1:exon
so has part: feature:113194-113327:1:exon
so has part: feature:113989-114144:1:exon
so has part: feature:114695-114920:1:exon
so has part: feature:115749-115823:1:exon
so has part: feature:116567-116773:1:exon
so has part: feature:117190-117279:1:exon
so has part: feature:118420-118560:1:exon
so has part: feature:119766-119888:1:exon
so has part: feature:120534-120608:1:exon
so has part: feature:122992-123097:1:exon
so has part: feature:123776-123928:1:exon
so has part: feature:124541-124676:1:exon
so has part: feature:125684-125731:1:exon
so has part: feature:126425-126575:1:exon
so has part: feature:127206-127416:1:exon
so has part: feature:128518-128765:1:exon
so has part: feature:129402-129593:1:exon
so has part: feature:129752-129878:1:exon
so has part: feature:130808-130950:1:exon
so has part: feature:131516-131646:1:exon
so has part: feature:131894-132069:1:exon
so has part: feature:132205-132328:1:exon
so has part: feature:133162-133397:1:exon
so has part: feature:134134-134242:1:exon
so has part: feature:134894-135054:1:exon
so has part: feature:135561-135669:1:exon
so has part: feature:136353-136532:1:exon
so has part: feature:136796-136912:1:exon
so has part: feature:137248-137397:1:exon
so has part: feature:138332-138481:1:exon
so has part: feature:139306-139402:1:exon
so has part: feature:141077-141225:1:exon
so has part: feature:143717-143851:1:exon
so has part: feature:144186-144353:1:exon
so has part: feature:157647-157779:1:exon

XP_030363997.1
type: Protein
SIO_000068: ncbiprotein

position:82857:1
position: 82857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181783:1
position: 181783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82857-82953:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83842-83919:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84141-84331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:84671-84751:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:85942-86058:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86277-86381:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:86726-86896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:87867-87967:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:88584-88752:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:90161-90253:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:90769-90979:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:91464-91643:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:92073-92203:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:92966-93038:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:93553-93717:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:94894-95024:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:95831-95963:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:97472-99694:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:100056-100201:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:100952-101986:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:102877-102967:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:103524-103650:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:104582-104762:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:105610-105792:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:106189-106266:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:108284-108506:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:108951-109161:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:109295-109466:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:109897-110009:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:110563-110772:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:112765-113030:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:113194-113327:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:113989-114144:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:114695-114920:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:115749-115823:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:116567-116773:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:117190-117279:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:118420-118560:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:119766-119888:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:120534-120608:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:122992-123097:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:123776-123928:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:124541-124676:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:125684-125731:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:126425-126575:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:127206-127416:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:128518-128765:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:129402-129593:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:129752-129878:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:130808-130950:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:131516-131646:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:131894-132069:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:132205-132328:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:133162-133397:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:134134-134242:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:134894-135054:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:135561-135669:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:136353-136532:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:136796-136912:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:137248-137397:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:138332-138481:1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:139306-139402:1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:141077-141225:1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:143717-143851:1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:144186-144353:1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:157647-157779:1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:159660-159855:1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:176750-176881:1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:180634-180874:1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:181652-181783:1:exon

VPS13D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: VPS13D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 13D isoform X1
translation: MLEGLVAWVLNTYLGKYVNNLNTDQLSVALLKGAVELENLPLKKDALKELELPFEVKAGFIGKITLQIPFYRPHVDPWVISVSKLHLIGAPEKKEDFDEEKEKLQEREHKKALLLALEEKWKTEQQQKGESYWYSVTASVVTRIVENIELKIQDVHLRFEDGVTNPLQPFAFGICIKKVSMQNAVFEPVEKLMRKKQLDVADFSVYWDTNCTLLGDLPPGQLQEAMDKSMESRDHNYIMEPVCTSSLLKRNCSKEPLRSRQTPRLECDIQLETIPLKLSQMQYQQIMGFLKELDRKERQLKFRKWRPKVSVTANCREWWIFALNANLSEIREQRQRSTWEFVLHRAQDAVSYTDLYYTKLKGEPLSAAEQAEMHRIEDEQTYEELKILYEIVHDKIHDLAESIKEPLPYSPGGSPTAESAHGSSTGMLQYLQSWFPGWGGWYGYAQQTYEGEPFEGLLTDPKEQWNPEDILGTDEFFDPAADASSMNTFTKRDHIFAKLNLQLQGGSFTLLHKNKKVVHAEETAFMQLEFSGVKILAESLPRRNSSLLRVQLGGLFLRDLATEGTIFPVLVFPNPQKEVGCMSSFGLQNLSSEMTNQNTDPDAPVFEMLYERNPIHSTFERRLEVSTRPLNIIYNPQAIKKVADFFYKGRVHTSGFGYQSELEARVAEAARRQYNKLKMQTKAEIRQTIDRLLVGDFIENSKSWTVCLDISAPQVIFPDDFKFVDPVLVVVDLGRILLTNSQEESKRSTDTFSSEVNELSDEEYKTPLATPPNTPPPESDTNSGMKMSEFTGLEISEEHLQAHLMSKKMYERYTLSFMDLQIMVGRVKDNWKHVQDSDVGPTHVVEKFNVHLQLERRLIYTSDPKYPGAVLSGSLPDLKIHINEDKILALKNCCAQLSTSETKSSDALHLGKDKIFAEVDQLGSLHDSVMNLTQSVVMLEQHTREVLVESQLLLAEFRVNCMQLGVESNGRYISVLKVFGTNAHFVKRPYDAEVSLTVHGLLLVDTMQTYGTDFDLLMASHKNLSFDVPTGSLRGSRAQSPVCGPRDARPIDAASLAERCTTASSTSSGNNGKDQESLIKLEYQFVSAECPSMNLDSSLQVISVQVNNLDIILNPETIVELICFLQKSFPKEKEDSSPQPLITDLEKDWREQETFQSTYVQNTEVAVDIHWLNILLLRTVGMTNGEKYGRKIATASIGGTKVNVSMCSKFDVNGSLGCLHLMDLTQDSVKNQYVVSIGNTVRYENLIGDVDYLESLFFRLDDGNSLPDALSFTFTEKSKEECSLNLKMASLHYNHSAKFLKELTLSMDELEENFRSMLKSAASKVTTVLATKTAEYSEMVSLFDTTPRSRDVANLEDNEGYGFGSQPLKIDTIKLILNVNIESPIVSIPRKPGSSELLVGHLGQISIQNFVPGEDESTSDRLQVEIKDIKMYSLNSSQFTSKKEPASEVSRGLHSSSGPASISSQDEPHFTRHDFFESLHKGHAFHILNNTTIQFKLEKIPLEKDITFPLSNEDFGISSIMKIEGKFVNPLQVVLAKHVYEQVLQTLDNLIYSEDLNRFPTTSVSSTCHSSPSASLHSTGTEFSSERKENGLFSHSSFNSVPNKLVAIRETKSFTQIQANFRISELQVQLSGDLTLGAQGLVSLKFQDFEVEFAKDHPQTLSIQIALRSLLMEDLLEKNPDSLYKNLMVSRGAPKPSSLAHKEYLSQSCPSVSNVEYPDMPRSLPSHMEEAPNVFQLYQRPVCASRKKQKDDADSEYPLTPPPSPSADRSKLSCGKSNFDDSLVHINIFLVDRKHPEFSSRYNRINRSVDVDFNCLDVLITLQTWVVILDFFGIGSTADNHAMKLQPEDTQQAVKSEINTLSASQAQEPVNTKLDLKVHSLSLVLNKTTSELAKASVSKLAAHLEVIEGDLALQGSIGSLSLSDLTAHGEFYRERFTTSGEEALIFQVFKYGRPDPLLLRECDIRVTLQMASVQYVHTQRFQAEVVSFIQHFTQLQDVLG…
SIO_010081: VPS13D
subclass of: SO_0000673
so part of: VPS13D
location: join(82857..82953,83842..83919,84141..84331,84671..84751,85942..86058,86277..86381,86726..86896,87867..87967,88584..88752,90161..90253,90769..90979,91464..91643,92073..92203,92966..93038,93553..93717,94894..95024,95831..95963,97472..99694,100056..100201,100952..101986,102877..102967,103524..103650,104582..104762,105610..105792,106189..106266,108284..108506,108951..109161,109295..109466,109897..110009,110563..110772,112765..113030,113194..113327,113989..114144,114695..114920,115749..115823,116567..116773,117190..117279,118420..118560,119766..119888,120534..120608,122992..123097,123776..123928,124541..124676,125684..125731,126425..126575,127206..127416,128518..128765,129402..129593,129752..129878,130808..130950,131516..131646,131894..132069,132205..132328,133162..133397,134134..134242,134894..135054,135561..135669,136353..136532,136796..136912,137248..137397,138332..138481,139306..139402,141077..141225,143717..143851,144186..144353,157647..157779,159660..159855,176750..176881,180634..180874,181652..181783)
location: region:82857-181783:1
so has part: feature:82857-82953:1:exon
so has part: feature:83842-83919:1:exon
so has part: feature:84141-84331:1:exon
so has part: feature:84671-84751:1:exon
so has part: feature:85942-86058:1:exon
so has part: feature:86277-86381:1:exon
so has part: feature:86726-86896:1:exon
so has part: feature:87867-87967:1:exon
so has part: feature:88584-88752:1:exon
so has part: feature:90161-90253:1:exon
so has part: feature:90769-90979:1:exon
so has part: feature:91464-91643:1:exon
so has part: feature:92073-92203:1:exon
so has part: feature:92966-93038:1:exon
so has part: feature:93553-93717:1:exon
so has part: feature:94894-95024:1:exon
so has part: feature:95831-95963:1:exon
so has part: feature:97472-99694:1:exon
so has part: feature:100056-100201:1:exon
so has part: feature:100952-101986:1:exon
so has part: feature:102877-102967:1:exon
so has part: feature:103524-103650:1:exon
so has part: feature:104582-104762:1:exon
so has part: feature:105610-105792:1:exon
so has part: feature:106189-106266:1:exon
so has part: feature:108284-108506:1:exon
so has part: feature:108951-109161:1:exon
so has part: feature:109295-109466:1:exon
so has part: feature:109897-110009:1:exon
so has part: feature:110563-110772:1:exon
so has part: feature:112765-113030:1:exon
so has part: feature:113194-113327:1:exon
so has part: feature:113989-114144:1:exon
so has part: feature:114695-114920:1:exon
so has part: feature:115749-115823:1:exon
so has part: feature:116567-116773:1:exon
so has part: feature:117190-117279:1:exon
so has part: feature:118420-118560:1:exon
so has part: feature:119766-119888:1:exon
so has part: feature:120534-120608:1:exon
so has part: feature:122992-123097:1:exon
so has part: feature:123776-123928:1:exon
so has part: feature:124541-124676:1:exon
so has part: feature:125684-125731:1:exon
so has part: feature:126425-126575:1:exon
so has part: feature:127206-127416:1:exon
so has part: feature:128518-128765:1:exon
so has part: feature:129402-129593:1:exon
so has part: feature:129752-129878:1:exon
so has part: feature:130808-130950:1:exon
so has part: feature:131516-131646:1:exon
so has part: feature:131894-132069:1:exon
so has part: feature:132205-132328:1:exon
so has part: feature:133162-133397:1:exon
so has part: feature:134134-134242:1:exon
so has part: feature:134894-135054:1:exon
so has part: feature:135561-135669:1:exon
so has part: feature:136353-136532:1:exon
so has part: feature:136796-136912:1:exon
so has part: feature:137248-137397:1:exon
so has part: feature:138332-138481:1:exon
so has part: feature:139306-139402:1:exon
so has part: feature:141077-141225:1:exon
so has part: feature:143717-143851:1:exon
so has part: feature:144186-144353:1:exon
so has part: feature:157647-157779:1:exon

XP_030363998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82857-82953:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83842-83919:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84141-84331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:84671-84751:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:85942-86058:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86277-86381:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:86726-86896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:87867-87967:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:88584-88752:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:90161-90253:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:90769-90979:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:91464-91643:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:92073-92203:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:92966-93038:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:93553-93717:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:94894-95024:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:95831-95963:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:97472-99694:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:100056-100201:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:100952-101986:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:102877-102967:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:103524-103650:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:104582-104762:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:105610-105792:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:106189-106266:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:108284-108506:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:108951-109161:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:109295-109466:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:109897-110009:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:110563-110772:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:112765-113030:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:113194-113327:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:113989-114144:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:114695-114920:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:115749-115823:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:116567-116773:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:117190-117279:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:118420-118560:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:119766-119888:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:120534-120608:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:122992-123097:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:123776-123928:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:124541-124676:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:125684-125731:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:126425-126575:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:127206-127416:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:128518-128765:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:129402-129593:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:129752-129878:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:130808-130950:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:131516-131646:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:131894-132069:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:132205-132328:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:133162-133397:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:134134-134242:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:134894-135054:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:135561-135669:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:136353-136532:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:136796-136912:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:137248-137397:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:138332-138481:1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:139306-139402:1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:141077-141225:1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:143717-143851:1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:144186-144353:1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:157647-157779:1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:159660-159855:1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:176750-176881:1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:180634-180874:1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:181652-181783:1:exon

VPS13D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: VPS13D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 13D isoform X2
translation: MLEGLVAWVLNTYLGKYVNNLNTDQLSVALLKGAVELENLPLKKDALKELELPFEVKAGFIGKITLQIPFYRPHVDPWVISVSKLHLIGAPEKKEDFDEEKEKLQEREHKKALLLALEEKWKTEQQQKGESYWYSVTASVVTRIVENIELKIQDVHLRFEDGVTNPLQPFAFGICIKKVSMQNAVFEPVEKLMRKKQLDVADFSVYWDTNCTLLGDLPPGQLQEAMDKSMESRDHNYIMEPVCTSSLLKRNCSKEPLRSRQTPRLECDIQLETIPLKLSQMQYQQIMGFLKELDRKERQLKFRKWRPKVSVTANCREWWIFALNANLSEIREQRQRSTWEFVLHRAQDAVSYTDLYYTKLKGEPLSAAEQAEMHRIEDEQTYEELKILYEIVHDKIHDLAESIKEPLPYSPGGSPTAESAHGSSTGMLQYLQSWFPGWGGWYGYAQQTYEGEPFEGLLTDPKEQWNPEDILGTDEFFDPAADASSMNTFTKRDHIFAKLNLQLQGGSFTLLHKNKKVVHAEETAFMQLEFSGVKILAESLPRRNSSLLRVQLGGLFLRDLATEGTIFPVLVFPNPQKEVGCMSSFGLQNLSSEMTNQNTDPDAPVFEMLYERNPIHSTFERRLEVSTRPLNIIYNPQAIKKVADFFYKGRVHTSGFGYQSELEARVAEAARRQYNKLKMQTKAEIRQTIDRLLVGDFIENSKSWTVCLDISAPQVIFPDDFKFVDPVLVVVDLGRILLTNSQEESKRSTDTFSSEVNELSDEEYKTPLATPPNTPPPESDTNSGMKMSEFTGLEISEEHLQAHLMSKKMYERYTLSFMDLQIMVGRVKDNWKHVQDSDVGPTHVVEKFNVHLQLERRLIYTSDPKYPGAVLSGSLPDLKIHINEDKILALKNCCAQLSTSETKSSDALHLGKDKIFAEVDQLGSLHDSVMNLTQSVVMLEQHTREVLVESQLLLAEFRVNCMQLGVESNGRYISVLKVFGTNAHFVKRPYDAEVSLTVHGLLLVDTMQTYGTDFDLLMASHKNLSFDVPTGSLRGSRAQSPVCGPRDARPIDAASLAERCTTASSTSSGNNGKDQESLIKLEYQFVSAECPSMNLDSSLQVISVQVNNLDIILNPETIVELICFLQKSFPKEKEDSSPQPLITDLEKDWREQETFQSTYVQNTEVAVDIHWLNILLLRTVGMTNGEKYGRKIATASIGGTKVNVSMCSKFDVNGSLGCLHLMDLTQDSVKNQYVVSIGNTVRYENLIGDVDYLESLFFRLDDGNSLPDALSFTFTEKSKEECSLNLKMASLHYNHSAKFLKELTLSMDELEENFRSMLKSAASKVTTVLATKTAEYSEMVSLFDTTPRSRDVANLEDNEGYGFGSQPLKIDTIKLILNVNIESPIVSIPRKPGSSELLVGHLGQISIQNFVPGEDESTSDRLQVEIKDIKMYSLNSSQFTSKKEPASEVSRGLHSSSGPASISSQDEPHFTRHDFFESLHKGHAFHILNNTTIQFKLEKIPLEKDITFPLSNEDFGISSIMKIEGKFVNPLQVVLAKHVYEQVLQTLDNLIYSEDLNRFPTTSVSSTCHSSPSASLHSTGTEFSSERKENGLFSHSSFNSVPNKLVAIRETKSFTQIQANFRISELQVQLSGDLTLGAQGLVSLKFQDFEVEFAKDHPQTLSIQIALRSLLMEDLLEKNPDSLYKNLMVSRGAPKPSSLAHKEYLSQSCPSVSNVEYPDMPRSLPSHMEEAPNVFQLYQRPVCASRKKQKDDADSEYPLTPPPSPSADRSKLSCGKSNFDDSLVHINIFLVDRKHPEFSSRYNRINRSVDVDFNCLDVLITLQTWVVILDFFGIGSTADNHAMKLQPEDTQQAVKSEINTLSASQAQEPVNTKLDLKVHSLSLVLNKTTSELAKASVSKLAAHLEVIEGDLALQGSIGSLSLSDLTAHGEFYRERFTTSGEEALIFQVFKYGRPDPLLLRECDIRVTLQMASVQYVHTQRFQAEVVSFIQHFTQLQDVLG…
SIO_010081: VPS13D
subclass of: SO_0000673
so part of: VPS13D
location: join(82857..82953,83842..83919,84141..84331,84671..84751,85942..86058,86277..86381,86726..86896,87867..87967,88584..88752,90161..90253,90769..90979,91464..91643,92073..92203,92966..93038,93553..93717,94894..95024,95831..95963,97472..99694,100056..100201,100952..101986,102877..102967,103524..103650,104582..104762,105610..105792,106189..106266,108284..108506,108951..109161,109295..109466,109897..110009,110563..110772,112765..113030,113194..113327,113989..114144,114695..114920,115749..115823,116567..116773,117190..117279,118420..118560,119766..119888,122992..123097,123776..123928,124541..124676,125684..125731,126425..126575,127206..127416,128518..128765,129402..129593,129752..129878,130808..130950,131516..131646,131894..132069,132205..132328,133162..133397,134134..134242,134894..135054,135561..135669,136353..136532,136796..136912,137248..137397,138332..138481,139306..139402,141077..141225,143717..143851,144186..144353,157647..157779,159660..159855,176750..176881,180634..180874,181652..181783)
location: region:82857-181783:1
so has part: feature:82857-82953:1:exon
so has part: feature:83842-83919:1:exon
so has part: feature:84141-84331:1:exon
so has part: feature:84671-84751:1:exon
so has part: feature:85942-86058:1:exon
so has part: feature:86277-86381:1:exon
so has part: feature:86726-86896:1:exon
so has part: feature:87867-87967:1:exon
so has part: feature:88584-88752:1:exon
so has part: feature:90161-90253:1:exon
so has part: feature:90769-90979:1:exon
so has part: feature:91464-91643:1:exon
so has part: feature:92073-92203:1:exon
so has part: feature:92966-93038:1:exon
so has part: feature:93553-93717:1:exon
so has part: feature:94894-95024:1:exon
so has part: feature:95831-95963:1:exon
so has part: feature:97472-99694:1:exon
so has part: feature:100056-100201:1:exon
so has part: feature:100952-101986:1:exon
so has part: feature:102877-102967:1:exon
so has part: feature:103524-103650:1:exon
so has part: feature:104582-104762:1:exon
so has part: feature:105610-105792:1:exon
so has part: feature:106189-106266:1:exon
so has part: feature:108284-108506:1:exon
so has part: feature:108951-109161:1:exon
so has part: feature:109295-109466:1:exon
so has part: feature:109897-110009:1:exon
so has part: feature:110563-110772:1:exon
so has part: feature:112765-113030:1:exon
so has part: feature:113194-113327:1:exon
so has part: feature:113989-114144:1:exon
so has part: feature:114695-114920:1:exon
so has part: feature:115749-115823:1:exon
so has part: feature:116567-116773:1:exon
so has part: feature:117190-117279:1:exon
so has part: feature:118420-118560:1:exon
so has part: feature:119766-119888:1:exon
so has part: feature:122992-123097:1:exon
so has part: feature:123776-123928:1:exon
so has part: feature:124541-124676:1:exon
so has part: feature:125684-125731:1:exon
so has part: feature:126425-126575:1:exon
so has part: feature:127206-127416:1:exon
so has part: feature:128518-128765:1:exon
so has part: feature:129402-129593:1:exon
so has part: feature:129752-129878:1:exon
so has part: feature:130808-130950:1:exon
so has part: feature:131516-131646:1:exon
so has part: feature:131894-132069:1:exon
so has part: feature:132205-132328:1:exon
so has part: feature:133162-133397:1:exon
so has part: feature:134134-134242:1:exon
so has part: feature:134894-135054:1:exon
so has part: feature:135561-135669:1:exon
so has part: feature:136353-136532:1:exon
so has part: feature:136796-136912:1:exon
so has part: feature:137248-137397:1:exon
so has part: feature:138332-138481:1:exon
so has part: feature:139306-139402:1:exon
so has part: feature:141077-141225:1:exon
so has part: feature:143717-143851:1:exon
so has part: feature:144186-144353:1:exon
so has part: feature:157647-157779:1:exon
so has part: feature:159660-159855:1:exon

XP_030363999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82857-82953:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83842-83919:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84141-84331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:84671-84751:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:85942-86058:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86277-86381:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:86726-86896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:87867-87967:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:88584-88752:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:90161-90253:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:90769-90979:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:91464-91643:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:92073-92203:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:92966-93038:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:93553-93717:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:94894-95024:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:95831-95963:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:97472-99694:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:100056-100201:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:100952-101986:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:102877-102967:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:103524-103650:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:104582-104762:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:105610-105792:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:106189-106266:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:108284-108506:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:108951-109161:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:109295-109466:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:109897-110009:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:110563-110772:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:112765-113030:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:113194-113327:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:113989-114144:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:114695-114920:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:115749-115823:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:116567-116773:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:117190-117279:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:118420-118560:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:119766-119888:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:122992-123097:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:123776-123928:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:124541-124676:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:125684-125731:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:126425-126575:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:127206-127416:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:128518-128765:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:129402-129593:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:129752-129878:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:130808-130950:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:131516-131646:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:131894-132069:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:132205-132328:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:133162-133397:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:134134-134242:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:134894-135054:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:135561-135669:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:136353-136532:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:136796-136912:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:137248-137397:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:138332-138481:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:139306-139402:1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:141077-141225:1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:143717-143851:1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:144186-144353:1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:157647-157779:1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:159660-159855:1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:176750-176881:1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:180634-180874:1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:181652-181783:1:exon

VPS13D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: VPS13D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 13D isoform X3
translation: MLEGLVAWVLNTYLGKYVNNLNTDQLSVALLKGAVELENLPLKKDALKELELPFEVKAGFIGKITLQIPFYRPHVDPWVISVSKLHLIGAPEKKEDFDEEKEKLQEREHKKALLLALEEKWKTEQQQKGESYWYSVTASVVTRIVENIELKIQDVHLRFEDGVTNPLQPFAFGICIKKVSMQNAVFEPVEKLMRKKQLDVADFSVYWDTNCTLLGDLPPGQLQEAMDKSMESRDHNYIMEPVCTSSLLKRNCSKEPLRSRQTPRLECDIQLETIPLKLSQMQYQQIMGFLKELDRKERQLKFRKWRPKVSVTANCREWWIFALNANLSEIREQRQRSTWEFVLHRAQDAVSYTDLYYTKLKGEPLSAAEQAEMHRIEDEQTYEELKILYEIVHDKIHDLAESIKEPLPYSPGGSPTAESAHGSSTGMLQYLQSWFPGWGGWYGYAQQTYEGEPFEGLLTDPKEQWNPEDILGTDEFFDPAADASSMNTFTKRDHIFAKLNLQLQGGSFTLLHKNKKVVHAEETAFMQLEFSGVKILAESLPRRNSSLLRVQLGGLFLRDLATEGTIFPVLVFPNPQKEVGCMSSFGLQNLSSEMTNQNTDPDAPVFEMLYERNPIHSTFERRLEVSTRPLNIIYNPQAIKKVADFFYKGRVHTSGFGYQSELEARVAEAARRQYNKLKMQTKAEIRQTIDRLLVGDFIENSKSWTVCLDISAPQVIFPDDFKFVDPVLVVVDLGRILLTNSQEESKRSTDTFSSEVNELSDEEYKTPLATPPNTPPPESDTNSGMKMSEFTGLEISEEHLQAHLMSKKMYERYTLSFMDLQIMVGRVKDNWKHVQDSDVGPTHVVEKFNVHLQLERRLIYTSDPKYPGAVLSGSLPDLKIHINEDKILALKNCCAQLSTSETKSSDALHLGKDKIFAEVDQLGSLHDSVMNLTQSVVMLEQHTREVLVESQLLLAEFRVNCMQLGVESNGRYISVLKVFGTNAHFVKRPYDAEVSLTVHGLLLVDTMQTYGTDFDLLMASHKNLSFDVPTGSLRGSRAQSPVCGPRDARPIDAASLAERCTTASSTSSGNNGKDQESLIKLEYQFVSAECPSMNLDSSLQVISVQVNNLDIILNPETIVELICFLQKSFPKEKEDSSPQPLITDLEKDWREQETFQSTYVQNTEVAVDIHWLNILLLRTVGMTNGEKYGRKIATASIGGTKVNVSMCSKFDVNGSLGCLHLMDLTQDSVKNQYVVSIGNTVRYENLIGDVDYLESLFFRLDDGNSLPDALSFTFTEKSKEECSLNLKMASLHYNHSAKFLKELTLSMDELEENFRSMLKSAASKVTTVLATKTAEYSEMVSLFDTTPRSRDVANLEDNEGYGFGSQPLKIDTIKLILNVNIESPIVSIPRKPGSSELLVGHLGQISIQNFVPGEDESTSDRLQVEIKDIKMYSLNSSQFTSKKEPASEVSRGLHSSSGPASISSQDEPHFTRHDFFESLHKGHAFHILNNTTIQFKLEKIPLEKDITFPLSNEDFGISSIMKIEGKFVNPLQVVLAKHVYEQVLQTLDNLIYSEDLNRFPTTSVSSTCHSSPSASLHSTGTEFSSERKENGLFSHSSFNSVPNKLVAIRETKSFTQIQANFRISELQVQLSGDLTLGAQGLVSLKFQDFEVEFAKDHPQTLSIQIALRSLLMEDLLEKNPDSLYKNLMVSRGAPKPSSLAHKEYLSQSCPSVSNVEYPDMPRSLPSHMEEAPNVFQLYQRPVCASRKKQKDDADSEYPLTPPPSPSADRSKLSCGKSNFDDSLVHINIFLVDRKHPEFSSRYNRINRSVDVDFNCLDVLITLQTWVVILDFFGIGSTADNHAMKLQPEDTQQAVKSEINTLSASQAQEPVNTKLDLKVHSLSLVLNKTTSELAKASVSKLAAHLEVIEGDLALQGSIGSLSLSDLTAHGEFYRERFTTSGEEALIFQVFKYGRPDPLLLRECDIRVTLQMASVQYVHTQRFQAEVVSFIQHFTQLQDVLG…
SIO_010081: VPS13D
subclass of: SO_0000673
so part of: VPS13D
location: join(82857..82953,83842..83919,84141..84331,84671..84751,85942..86058,86277..86381,86726..86896,87867..87967,88584..88752,90161..90253,90769..90979,91464..91643,92073..92203,92966..93038,93553..93717,94894..95024,95831..95963,97472..99694,100056..100201,100952..101986,102877..102967,103524..103650,104582..104762,105610..105792,108284..108506,108951..109161,109295..109466,109897..110009,110563..110772,112765..113030,113194..113327,113989..114144,114695..114920,115749..115823,116567..116773,117190..117279,118420..118560,119766..119888,120534..120608,122992..123097,123776..123928,124541..124676,125684..125731,126425..126575,127206..127416,128518..128765,129402..129593,129752..129878,130808..130950,131516..131646,131894..132069,132205..132328,133162..133397,134134..134242,134894..135054,135561..135669,136353..136532,136796..136912,137248..137397,138332..138481,139306..139402,141077..141225,143717..143851,144186..144353,157647..157779,159660..159855,176750..176881,180634..180874,181652..181783)
location: region:82857-181783:1
so has part: feature:82857-82953:1:exon
so has part: feature:83842-83919:1:exon
so has part: feature:84141-84331:1:exon
so has part: feature:84671-84751:1:exon
so has part: feature:85942-86058:1:exon
so has part: feature:86277-86381:1:exon
so has part: feature:86726-86896:1:exon
so has part: feature:87867-87967:1:exon
so has part: feature:88584-88752:1:exon
so has part: feature:90161-90253:1:exon
so has part: feature:90769-90979:1:exon
so has part: feature:91464-91643:1:exon
so has part: feature:92073-92203:1:exon
so has part: feature:92966-93038:1:exon
so has part: feature:93553-93717:1:exon
so has part: feature:94894-95024:1:exon
so has part: feature:95831-95963:1:exon
so has part: feature:97472-99694:1:exon
so has part: feature:100056-100201:1:exon
so has part: feature:100952-101986:1:exon
so has part: feature:102877-102967:1:exon
so has part: feature:103524-103650:1:exon
so has part: feature:104582-104762:1:exon
so has part: feature:105610-105792:1:exon
so has part: feature:108284-108506:1:exon
so has part: feature:108951-109161:1:exon
so has part: feature:109295-109466:1:exon
so has part: feature:109897-110009:1:exon
so has part: feature:110563-110772:1:exon
so has part: feature:112765-113030:1:exon
so has part: feature:113194-113327:1:exon
so has part: feature:113989-114144:1:exon
so has part: feature:114695-114920:1:exon
so has part: feature:115749-115823:1:exon
so has part: feature:116567-116773:1:exon
so has part: feature:117190-117279:1:exon
so has part: feature:118420-118560:1:exon
so has part: feature:119766-119888:1:exon
so has part: feature:120534-120608:1:exon
so has part: feature:122992-123097:1:exon
so has part: feature:123776-123928:1:exon
so has part: feature:124541-124676:1:exon
so has part: feature:125684-125731:1:exon
so has part: feature:126425-126575:1:exon
so has part: feature:127206-127416:1:exon
so has part: feature:128518-128765:1:exon
so has part: feature:129402-129593:1:exon
so has part: feature:129752-129878:1:exon
so has part: feature:130808-130950:1:exon
so has part: feature:131516-131646:1:exon
so has part: feature:131894-132069:1:exon
so has part: feature:132205-132328:1:exon
so has part: feature:133162-133397:1:exon
so has part: feature:134134-134242:1:exon
so has part: feature:134894-135054:1:exon
so has part: feature:135561-135669:1:exon
so has part: feature:136353-136532:1:exon
so has part: feature:136796-136912:1:exon
so has part: feature:137248-137397:1:exon
so has part: feature:138332-138481:1:exon
so has part: feature:139306-139402:1:exon
so has part: feature:141077-141225:1:exon
so has part: feature:143717-143851:1:exon
so has part: feature:144186-144353:1:exon
so has part: feature:157647-157779:1:exon
so has part: feature:159660-159855:1:exon

XP_030364000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82857-82953:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83842-83919:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84141-84331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:84671-84751:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:85942-86058:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86277-86381:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:86726-86896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:87867-87967:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:88584-88752:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:90161-90253:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:90769-90979:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:91464-91643:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:92073-92203:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:92966-93038:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:93553-93717:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:94894-95024:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:95831-95963:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:97472-99694:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:100056-100201:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:100952-101986:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:102877-102967:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:103524-103650:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:104582-104762:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:105610-105792:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:108284-108506:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:108951-109161:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:109295-109466:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:109897-110009:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:110563-110772:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:112765-113030:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:113194-113327:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:113989-114144:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:114695-114920:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:115749-115823:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:116567-116773:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:117190-117279:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:118420-118560:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:119766-119888:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:120534-120608:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:122992-123097:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:123776-123928:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:124541-124676:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:125684-125731:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:126425-126575:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:127206-127416:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:128518-128765:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:129402-129593:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:129752-129878:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:130808-130950:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:131516-131646:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:131894-132069:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:132205-132328:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:133162-133397:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:134134-134242:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:134894-135054:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:135561-135669:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:136353-136532:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:136796-136912:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:137248-137397:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:138332-138481:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:139306-139402:1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:141077-141225:1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:143717-143851:1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:144186-144353:1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:157647-157779:1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:159660-159855:1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:176750-176881:1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:180634-180874:1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:181652-181783:1:exon

VPS13D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: VPS13D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 13D isoform X4
translation: MLEGLVAWVLNTYLGKYVNNLNTDQLSVALLKGAVELENLPLKKDALKELELPFEVKAGFIGKITLQIPFYRPHVDPWVISVSKLHLIGAPEKKEDFDEEKEKLQEREHKKALLLALEEKWKTEQQQKGESYWYSVTASVVTRIVENIELKIQDVHLRFEDGVTNPLQPFAFGICIKKVSMQNAVFEPVEKLMRKKQLDVADFSVYWDTNCTLLGDLPPGQLQEAMDKSMESRDHNYIMEPVCTSSLLKRNCSKEPLRSRQTPRLECDIQLETIPLKLSQMQYQQIMGFLKELDRKERQLKFRKWRPKVSVTANCREWWIFALNANLSEIREQRQRSTWEFVLHRAQDAVSYTDLYYTKLKGEPLSAAEQAEMHRIEDEQTYEELKILYEIVHDKIHDLAESIKEPLPYSPGGSPTAESAHGSSTGMLQYLQSWFPGWGGWYGYAQQTYEGEPFEGLLTDPKEQWNPEDILGTDEFFDPAADASSMNTFTKRDHIFAKLNLQLQGGSFTLLHKNKKVVHAEETAFMQLEFSGVKILAESLPRRNSSLLRVQLGGLFLRDLATEGTIFPVLVFPNPQKEVGCMSSFGLQNLSSEMTNQNTDPDAPVFEMLYERNPIHSTFERRLEVSTRPLNIIYNPQAIKKVADFFYKGRVHTSGFGYQSELEARVAEAARRQYNKLKMQTKAEIRQTIDRLLVGDFIENSKSWTVCLDISAPQVIFPDDFKFVDPVLVVVDLGRILLTNSQEESKRSTDTFSSEVNELSDEEYKTPLATPPNTPPPESDTNSGMKMSEFTGLEISEEHLQAHLMSKKMYERYTLSFMDLQIMVGRVKDNWKHVQDSDVGPTHVVEKFNVHLQLERRLIYTSDPKYPGAVLSGSLPDLKIHINEDKILALKNCCAQLSTSETKSSDALHLGKDKIFAEVDQLGSLHDSVMNLTQSVVMLEQHTREVLVESQLLLAEFRVNCMQLGVESNGRYISVLKVFGTNAHFVKRPYDAEVSLTVHGLLLVDTMQTYGTDFDLLMASHKNLSFDVPTGSLRGSRAQSPVCGPRDARPIDAASLAERCTTASSTSSGNNGKDQESLIKLEYQFVSAECPSMNLDSSLQVISVQVNNLDIILNPETIVELICFLQKSFPKEKEDSSPQPLITDLEKDWREQETFQSTYVQNTEVAVDIHWLNILLLRTVGMTNGEKYGRKIATASIGGTKVNVSMCSKFDVNGSLGCLHLMDLTQDSVKNQYVVSIGNTVRYENLIGDVDYLESLFFRLDDGNSLPDALSFTFTEKSKEECSLNLKMASLHYNHSAKFLKELTLSMDELEENFRSMLKSAASKVTTVLATKTAEYSEMVSLFDTTPRSRDVANLEDNEGYGFGSQPLKIDTIKLILNVNIESPIVSIPRKPGSSELLVGHLGQISIQNFVPGEDESTSDRLQVEIKDIKMYSLNSSQFTSKKEPASEVSRGLHSSSGPASISSQDEPHFTRHDFFESLHKGHAFHILNNTTIQFKLEKIPLEKDITFPLSNEDFGISSIMKIEGKFVNPLQVVLAKHVYEQVLQTLDNLIYSEDLNRFPTTSVSSTCHSSPSASLHSTGTEFSSERKENGLFSHSSFNSVPNKLVAIRETKSFTQIQANFRISELQVQLSGDLTLGAQGLVSLKFQDFEVEFAKDHPQTLSIQIALRSLLMEDLLEKNPDSLYKNLMVSRGAPKPSSLAHKEYLSQSCPSVSNVEYPDMPRSLPSHMEEAPNVFQLYQRPVCASRKKQKDDADSEYPLTPPPSPSADRSKLSCGKSNFDDSLVHINIFLVDRKHPEFSSRYNRINRSVDVDFNCLDVLITLQTWVVILDFFGIGSTADNHAMKLQPEDTQQAVKSEINTLSASQAQEPVNTKLDLKVHSLSLVLNKTTSELAKASVSKLAAHLEVIEGDLALQGSIGSLSLSDLTAHGEFYRERFTTSGEEALIFQVFKYGRPDPLLLRECDIRVTLQMASVQYVHTQRFQAEVVSFIQHFTQLQDVLG…
SIO_010081: VPS13D
subclass of: SO_0000673
so part of: VPS13D
location: join(82857..82953,83842..83919,84141..84331,84671..84751,85942..86058,86277..86381,86726..86896,87867..87967,88584..88752,90161..90253,90769..90979,91464..91643,92073..92203,92966..93038,93553..93717,94894..95024,95831..95963,97472..99694,100056..100201,100952..101986,102877..102967,103524..103650,104582..104762,105610..105792,108287..108506,108951..109161,109295..109466,109897..110009,110563..110772,112765..113030,113194..113327,113989..114144,114695..114920,115749..115823,116567..116773,117190..117279,118420..118560,119766..119888,120534..120608,122992..123097,123776..123928,124541..124676,125684..125731,126425..126575,127206..127416,128518..128765,129402..129593,129752..129878,130808..130950,131516..131646,131894..132069,132205..132328,133162..133397,134134..134242,134894..135054,135561..135669,136353..136532,136796..136912,137248..137397,138332..138481,139306..139402,141077..141225,143717..143851,144186..144353,157647..157779,159660..159855,176750..176881,180634..180874,181652..181783)
location: region:82857-181783:1
so has part: feature:82857-82953:1:exon
so has part: feature:83842-83919:1:exon
so has part: feature:84141-84331:1:exon
so has part: feature:84671-84751:1:exon
so has part: feature:85942-86058:1:exon
so has part: feature:86277-86381:1:exon
so has part: feature:86726-86896:1:exon
so has part: feature:87867-87967:1:exon
so has part: feature:88584-88752:1:exon
so has part: feature:90161-90253:1:exon
so has part: feature:90769-90979:1:exon
so has part: feature:91464-91643:1:exon
so has part: feature:92073-92203:1:exon
so has part: feature:92966-93038:1:exon
so has part: feature:93553-93717:1:exon
so has part: feature:94894-95024:1:exon
so has part: feature:95831-95963:1:exon
so has part: feature:97472-99694:1:exon
so has part: feature:100056-100201:1:exon
so has part: feature:100952-101986:1:exon
so has part: feature:102877-102967:1:exon
so has part: feature:103524-103650:1:exon
so has part: feature:104582-104762:1:exon
so has part: feature:105610-105792:1:exon
so has part: feature:108287-108506:1:exon
so has part: feature:108951-109161:1:exon
so has part: feature:109295-109466:1:exon
so has part: feature:109897-110009:1:exon
so has part: feature:110563-110772:1:exon
so has part: feature:112765-113030:1:exon
so has part: feature:113194-113327:1:exon
so has part: feature:113989-114144:1:exon
so has part: feature:114695-114920:1:exon
so has part: feature:115749-115823:1:exon
so has part: feature:116567-116773:1:exon
so has part: feature:117190-117279:1:exon
so has part: feature:118420-118560:1:exon
so has part: feature:119766-119888:1:exon
so has part: feature:120534-120608:1:exon
so has part: feature:122992-123097:1:exon
so has part: feature:123776-123928:1:exon
so has part: feature:124541-124676:1:exon
so has part: feature:125684-125731:1:exon
so has part: feature:126425-126575:1:exon
so has part: feature:127206-127416:1:exon
so has part: feature:128518-128765:1:exon
so has part: feature:129402-129593:1:exon
so has part: feature:129752-129878:1:exon
so has part: feature:130808-130950:1:exon
so has part: feature:131516-131646:1:exon
so has part: feature:131894-132069:1:exon
so has part: feature:132205-132328:1:exon
so has part: feature:133162-133397:1:exon
so has part: feature:134134-134242:1:exon
so has part: feature:134894-135054:1:exon
so has part: feature:135561-135669:1:exon
so has part: feature:136353-136532:1:exon
so has part: feature:136796-136912:1:exon
so has part: feature:137248-137397:1:exon
so has part: feature:138332-138481:1:exon
so has part: feature:139306-139402:1:exon
so has part: feature:141077-141225:1:exon
so has part: feature:143717-143851:1:exon
so has part: feature:144186-144353:1:exon
so has part: feature:157647-157779:1:exon
so has part: feature:159660-159855:1:exon

XP_030364001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82857-82953:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83842-83919:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84141-84331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:84671-84751:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:85942-86058:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86277-86381:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:86726-86896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:87867-87967:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:88584-88752:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:90161-90253:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:90769-90979:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:91464-91643:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:92073-92203:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:92966-93038:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:93553-93717:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:94894-95024:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:95831-95963:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:97472-99694:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:100056-100201:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:100952-101986:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:102877-102967:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:103524-103650:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:104582-104762:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:105610-105792:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:108287-108506:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:108951-109161:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:109295-109466:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:109897-110009:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:110563-110772:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:112765-113030:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:113194-113327:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:113989-114144:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:114695-114920:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:115749-115823:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:116567-116773:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:117190-117279:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:118420-118560:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:119766-119888:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:120534-120608:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:122992-123097:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:123776-123928:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:124541-124676:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:125684-125731:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:126425-126575:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:127206-127416:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:128518-128765:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:129402-129593:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:129752-129878:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:130808-130950:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:131516-131646:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:131894-132069:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:132205-132328:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:133162-133397:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:134134-134242:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:134894-135054:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:135561-135669:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:136353-136532:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:136796-136912:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:137248-137397:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:138332-138481:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:139306-139402:1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:141077-141225:1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:143717-143851:1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:144186-144353:1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:157647-157779:1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:159660-159855:1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:176750-176881:1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:180634-180874:1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:181652-181783:1:exon

VPS13D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: VPS13D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 13D isoform X6
translation: MLEGLVAWVLNTYLGKYVNNLNTDQLSVALLKGAVELENLPLKKDALKELELPFEVKAGFIGKITLQIPFYRPHVDPWVISVSKLHLIGAPEKKEDFDEEKEKLQEREHKKALLLALEEKWKTEQQQKGESYWYSVTASVVTRIVENIELKIQDVHLRFEDGVTNPLQPFAFGICIKKVSMQNAVFEPVEKLMRKKQLDVADFSVYWDTNCTLLGDLPPGQLQEAMDKSMESRDHNYIMEPVCTSSLLKRNCSKEPLRSRQTPRLECDIQLETIPLKLSQMQYQQIMGFLKELDRKERQLKFRKWRPKVSVTANCREWWIFALNANLSEIREQRQRSTWEFVLHRAQDAVSYTDLYYTKLKGEPLSAAEQAEMHRIEDEQTYEELKILYEIVHDKIHDLAESIKEPLPYSPGGSPTAESAHGSSTGMLQYLQSWFPGWGGWYGYAQQTYEGEPFEGLLTDPKEQWNPEDILGTDEFFDPAADASSMNTFTKRDHIFAKLNLQLQGGSFTLLHKNKKVVHAEETAFMQLEFSGVKILAESLPRRNSSLLRVQLGGLFLRDLATEGTIFPVLVFPNPQKEVGCMSSFGLQNLSSEMTNQNTDPDAPVFEMLYERNPIHSTFERRLEVSTRPLNIIYNPQAIKKVADFFYKGRVHTSGFGYQSELEARVAEAARRQYNKLKMQTKAEIRQTIDRLLVGDFIENSKSWTVCLDISAPQVIFPDDFKFVDPVLVVVDLGRILLTNSQEESKRSTDTFSSEVNELSDEEYKTPLATPPNTPPPESDTNSGMKMSEFTGLEISEEHLQAHLMSKKMYERYTLSFMDLQIMVGRVKDNWKHVQDSDVGPTHVVEKFNVHLQLERRLIYTSDPKYPGAVLSGSLPDLKIHINEDKILALKNCCAQLSTSETKSSDALHLGKDKIFAEVDQLGSLHDSVMNLTQSVVMLEQHTREVLVESQLLLAEFRVNCMQLGVESNGRYISVLKVFGTNAHFVKRPYDAEVSLTVHGLLLVDTMQTYGTDFDLLMASHKNLSFDVPTGSLRGSRAQSPVCGPRDARPIDAASLAERCTTASSTSSGNNGKDQESLIKLEYQFVSAECPSMNLDSSLQVISVQVNNLDIILNPETIVELICFLQKSFPKEKEDSSPQPLITDLEKDWREQETFQSTYVQNTEVAVDIHWLNILLLRTVGMTNGEKYGRKIATASIGGTKVNVSMCSKFDVNGSLGCLHLMDLTQDSVKNQYVVSIGNTVRYENLIGDVDYLESLFFRLDDGNSLPDALSFTFTEKSKEECSLNLKMASLHYNHSAKFLKELTLSMDELEENFRSMLKSAASKVTTVLATKTAEYSEMVSLFDTTPRSRDVANLEDNEGYGFGSQPLKIDTIKLILNVNIESPIVSIPRKPGSSELLVGHLGQISIQNFVPGEDESTSDRLQVEIKDIKMYSLNSSQFTSKKEPASEVSRGLHSSSGPASISSQDEPHFTRHDFFESLHKGHAFHILNNTTIQFKLEKIPLEKDITFPLSNEDFGISSIMKIEGKFVNPLQVVLAKHVYEQVLQTLDNLIYSEDLNRFPTTSVSSTCHSSPSASLHSTGTEFSSERKENGLFSHSSFNSVPNKLVAIRETKSFTQIQANFRISELQVQLSGDLTLGAQGLVSLKFQDFEVEFAKDHPQTLSIQIALRSLLMEDLLEKNPDSLYKNLMVSRGAPKPSSLAHKEYLSQSCPSVSNVEYPDMPRSLPSHMEEAPNVFQLYQRPVCASRKKQKDDADSEYPLTPPPSPSADRSKLSCGKSNFDDSLVHINIFLVDRKHPEFSSRYNRINRSVDVDFNCLDVLITLQTWVVILDFFGIGSTADNHAMKLQPEDTQQAVKSEINTLSASQAQEPVNTKLDLKVHSLSLVLNKTTSELAKASVSKLAAHLEVIEGDLALQGSIGSLSLSDLTAHGEFYRERFTTSGEEALIFQVFKYGRPDPLLLRECDIRVTLQMASVQYVHTQRFQAEVVSFIQHFTQLQDVLG…
SIO_010081: VPS13D
subclass of: SO_0000673
so part of: VPS13D
location: join(82857..82953,83842..83919,84141..84331,84671..84751,85942..86058,86277..86381,86726..86896,87867..87967,88584..88752,90161..90253,90769..90979,91464..91643,92073..92203,92966..93038,93553..93717,94894..95024,95831..95963,97472..99694,100056..100201,100952..101986,102877..102967,103524..103650,104582..104762,105610..105792,108287..108506,108951..109161,109295..109466,109897..110009,110563..110772,112765..113030,113194..113327,113989..114144,114695..114920,115749..115823,116567..116773,117190..117279,118420..118560,119766..119888,122992..123097,123776..123928,124541..124676,125684..125731,126425..126575,127206..127416,128518..128765,129402..129593,129752..129878,130808..130950,131516..131646,131894..132069,132205..132328,133162..133397,134134..134242,134894..135054,135561..135669,136353..136532,136796..136912,137248..137397,138332..138481,139306..139402,141077..141225,143717..143851,144186..144353,157647..157779,159660..159855,176750..176881,180634..180874,181652..181783)
location: region:82857-181783:1
so has part: feature:82857-82953:1:exon
so has part: feature:83842-83919:1:exon
so has part: feature:84141-84331:1:exon
so has part: feature:84671-84751:1:exon
so has part: feature:85942-86058:1:exon
so has part: feature:86277-86381:1:exon
so has part: feature:86726-86896:1:exon
so has part: feature:87867-87967:1:exon
so has part: feature:88584-88752:1:exon
so has part: feature:90161-90253:1:exon
so has part: feature:90769-90979:1:exon
so has part: feature:91464-91643:1:exon
so has part: feature:92073-92203:1:exon
so has part: feature:92966-93038:1:exon
so has part: feature:93553-93717:1:exon
so has part: feature:94894-95024:1:exon
so has part: feature:95831-95963:1:exon
so has part: feature:97472-99694:1:exon
so has part: feature:100056-100201:1:exon
so has part: feature:100952-101986:1:exon
so has part: feature:102877-102967:1:exon
so has part: feature:103524-103650:1:exon
so has part: feature:104582-104762:1:exon
so has part: feature:105610-105792:1:exon
so has part: feature:108287-108506:1:exon
so has part: feature:108951-109161:1:exon
so has part: feature:109295-109466:1:exon
so has part: feature:109897-110009:1:exon
so has part: feature:110563-110772:1:exon
so has part: feature:112765-113030:1:exon
so has part: feature:113194-113327:1:exon
so has part: feature:113989-114144:1:exon
so has part: feature:114695-114920:1:exon
so has part: feature:115749-115823:1:exon
so has part: feature:116567-116773:1:exon
so has part: feature:117190-117279:1:exon
so has part: feature:118420-118560:1:exon
so has part: feature:119766-119888:1:exon
so has part: feature:122992-123097:1:exon
so has part: feature:123776-123928:1:exon
so has part: feature:124541-124676:1:exon
so has part: feature:125684-125731:1:exon
so has part: feature:126425-126575:1:exon
so has part: feature:127206-127416:1:exon
so has part: feature:128518-128765:1:exon
so has part: feature:129402-129593:1:exon
so has part: feature:129752-129878:1:exon
so has part: feature:130808-130950:1:exon
so has part: feature:131516-131646:1:exon
so has part: feature:131894-132069:1:exon
so has part: feature:132205-132328:1:exon
so has part: feature:133162-133397:1:exon
so has part: feature:134134-134242:1:exon
so has part: feature:134894-135054:1:exon
so has part: feature:135561-135669:1:exon
so has part: feature:136353-136532:1:exon
so has part: feature:136796-136912:1:exon
so has part: feature:137248-137397:1:exon
so has part: feature:138332-138481:1:exon
so has part: feature:139306-139402:1:exon
so has part: feature:141077-141225:1:exon
so has part: feature:143717-143851:1:exon
so has part: feature:144186-144353:1:exon
so has part: feature:157647-157779:1:exon
so has part: feature:159660-159855:1:exon
so has part: feature:176750-176881:1:exon

XP_030364003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82857-82953:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83842-83919:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84141-84331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:84671-84751:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:85942-86058:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86277-86381:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:86726-86896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:87867-87967:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:88584-88752:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:90161-90253:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:90769-90979:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:91464-91643:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:92073-92203:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:92966-93038:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:93553-93717:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:94894-95024:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:95831-95963:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:97472-99694:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:100056-100201:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:100952-101986:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:102877-102967:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:103524-103650:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:104582-104762:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:105610-105792:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:108287-108506:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:108951-109161:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:109295-109466:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:109897-110009:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:110563-110772:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:112765-113030:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:113194-113327:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:113989-114144:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:114695-114920:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:115749-115823:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:116567-116773:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:117190-117279:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:118420-118560:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:119766-119888:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:122992-123097:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:123776-123928:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:124541-124676:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:125684-125731:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:126425-126575:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:127206-127416:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:128518-128765:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:129402-129593:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:129752-129878:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:130808-130950:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:131516-131646:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:131894-132069:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:132205-132328:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:133162-133397:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:134134-134242:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:134894-135054:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:135561-135669:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:136353-136532:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:136796-136912:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:137248-137397:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:138332-138481:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:139306-139402:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:141077-141225:1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:143717-143851:1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:144186-144353:1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:157647-157779:1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:159660-159855:1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:176750-176881:1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:180634-180874:1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:181652-181783:1:exon

VPS13D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: VPS13D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 13D isoform X7
translation: MLEGLVAWVLNTYLGKYVNNLNTDQLSVALLKGAVELENLPLKKDALKELELPFEVKAGFIGKITLQIPFYRPHVDPWVISVSKLHLIGAPEKKEDFDEEKEKLQEREHKKALLLALEEKWKTEQQQKGESYWYSVTASVVTRIVENIELKIQDVHLRFEDGVTNPLQPFAFGICIKKVSMQNAVFEPVEKLMRKKQLDVADFSVYWDTNCTLLGDLPPGQLQEAMDKSMESRDHNYIMEPVCTSSLLKRNCSKEPLRSRQTPRLECDIQLETIPLKLSQMQYQQIMGFLKELDRKERQLKFRKWRPKVSVTANCREWWIFALNANLSEIREQRQRSTWEFVLHRAQDAVSYTDLYYTKLKGEPLSAAEQAEMHRIEDEQTYEELKILYEIVHDKIHDLAESIKEPLPYSPGGSPTAESAHGSSTGMLQYLQSWFPGWGGWYGYAQQTYEGEPFEGLLTDPKEQWNPEDILGTDEFFDPAADASSMNTFTKRDHIFAKLNLQLQGGSFTLLHKNKKVVHAEETAFMQLEFSGVKILAESLPRRNSSLLRVQLGGLFLRDLATEGTIFPVLVFPNPQKEVGCMSSFGLQNLSSEMTNQNTDPDAPVFEMLYERNPIHSTFERRLEVSTRPLNIIYNPQAIKKVADFFYKGRVHTSEESKRSTDTFSSEVNELSDEEYKTPLATPPNTPPPESDTNSGMKMSEFTGLEISEEHLQAHLMSKKMYERYTLSFMDLQIMVGRVKDNWKHVQDSDVGPTHVVEKFNVHLQLERRLIYTSDPKYPGAVLSGSLPDLKIHINEDKILALKNCCAQLSTSETKSSDALHLGKDKIFAEVDQLGSLHDSVMNLTQSVVMLEQHTREVLVESQLLLAEFRVNCMQLGVESNGRYISVLKVFGTNAHFVKRPYDAEVSLTVHGLLLVDTMQTYGTDFDLLMASHKNLSFDVPTGSLRGSRAQSPVCGPRDARPIDAASLAERCTTASSTSSGNNGKDQESLIKLEYQFVSAECPSMNLDSSLQVISVQVNNLDIILNPETIVELICFLQKSFPKEKEDSSPQPLITDLEKDWREQETFQSTYVQNTEVAVDIHWLNILLLRTVGMTNGEKYGRKIATASIGGTKVNVSMCSKFDVNGSLGCLHLMDLTQDSVKNQYVVSIGNTVRYENLIGDVDYLESLFFRLDDGNSLPDALSFTFTEKSKEECSLNLKMASLHYNHSAKFLKELTLSMDELEENFRSMLKSAASKVTTVLATKTAEYSEMVSLFDTTPRSRDVANLEDNEGYGFGSQPLKIDTIKLILNVNIESPIVSIPRKPGSSELLVGHLGQISIQNFVPGEDESTSDRLQVEIKDIKMYSLNSSQFTSKKEPASEVSRGLHSSSGPASISSQDEPHFTRHDFFESLHKGHAFHILNNTTIQFKLEKIPLEKDITFPLSNEDFGISSIMKIEGKFVNPLQVVLAKHVYEQVLQTLDNLIYSEDLNRFPTTSVSSTCHSSPSASLHSTGTEFSSERKENGLFSHSSFNSVPNKLVAIRETKSFTQIQANFRISELQVQLSGDLTLGAQGLVSLKFQDFEVEFAKDHPQTLSIQIALRSLLMEDLLEKNPDSLYKNLMVSRGAPKPSSLAHKEYLSQSCPSVSNVEYPDMPRSLPSHMEEAPNVFQLYQRPVCASRKKQKDDADSEYPLTPPPSPSADRSKLSCGKSNFDDSLVHINIFLVDRKHPEFSSRYNRINRSVDVDFNCLDVLITLQTWVVILDFFGIGSTADNHAMKLQPEDTQQAVKSEINTLSASQAQEPVNTKLDLKVHSLSLVLNKTTSELAKASVSKLAAHLEVIEGDLALQGSIGSLSLSDLTAHGEFYRERFTTSGEEALIFQVFKYGRPDPLLLRECDIRVTLQMASVQYVHTQRFQAEVVSFIQHFTQLQDVLGWQRAAIEGQTVRDKAQRASRVLLDIEAGAPVLLIPESSKSNSLIVANLGKLKVKNRFLFAGMPGTFSLKNKGYFSSANSRKQRSVWGE…
SIO_010081: VPS13D
subclass of: SO_0000673
so part of: VPS13D
location: join(82857..82953,83842..83919,84141..84331,84671..84751,85942..86058,86277..86381,86726..86896,87867..87967,88584..88752,90161..90253,90769..90979,91464..91643,92073..92203,92966..93038,93553..93717,97472..99694,100056..100201,100952..101986,102877..102967,103524..103650,104582..104762,105610..105792,106189..106266,108284..108506,108951..109161,109295..109466,109897..110009,110563..110772,112765..113030,113194..113327,113989..114144,114695..114920,115749..115823,116567..116773,117190..117279,118420..118560,119766..119888,120534..120608,122992..123097,123776..123928,124541..124676,125684..125731,126425..126575,127206..127416,128518..128765,129402..129593,129752..129878,130808..130950,131516..131646,131894..132069,132205..132328,133162..133397,134134..134242,134894..135054,135561..135669,136353..136532,136796..136912,137248..137397,138332..138481,139306..139402,141077..141225,143717..143851,144186..144353,157647..157779,159660..159855,176750..176881,180634..180874,181652..181783)
location: region:82857-181783:1
so has part: feature:82857-82953:1:exon
so has part: feature:83842-83919:1:exon
so has part: feature:84141-84331:1:exon
so has part: feature:84671-84751:1:exon
so has part: feature:85942-86058:1:exon
so has part: feature:86277-86381:1:exon
so has part: feature:86726-86896:1:exon
so has part: feature:87867-87967:1:exon
so has part: feature:88584-88752:1:exon
so has part: feature:90161-90253:1:exon
so has part: feature:90769-90979:1:exon
so has part: feature:91464-91643:1:exon
so has part: feature:92073-92203:1:exon
so has part: feature:92966-93038:1:exon
so has part: feature:93553-93717:1:exon
so has part: feature:97472-99694:1:exon
so has part: feature:100056-100201:1:exon
so has part: feature:100952-101986:1:exon
so has part: feature:102877-102967:1:exon
so has part: feature:103524-103650:1:exon
so has part: feature:104582-104762:1:exon
so has part: feature:105610-105792:1:exon
so has part: feature:106189-106266:1:exon
so has part: feature:108284-108506:1:exon
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so has part: feature:109897-110009:1:exon
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so has part: feature:114695-114920:1:exon
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so has part: feature:116567-116773:1:exon
so has part: feature:117190-117279:1:exon
so has part: feature:118420-118560:1:exon
so has part: feature:119766-119888:1:exon
so has part: feature:120534-120608:1:exon
so has part: feature:122992-123097:1:exon
so has part: feature:123776-123928:1:exon
so has part: feature:124541-124676:1:exon
so has part: feature:125684-125731:1:exon
so has part: feature:126425-126575:1:exon
so has part: feature:127206-127416:1:exon
so has part: feature:128518-128765:1:exon
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so has part: feature:130808-130950:1:exon
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so has part: feature:131894-132069:1:exon
so has part: feature:132205-132328:1:exon
so has part: feature:133162-133397:1:exon
so has part: feature:134134-134242:1:exon
so has part: feature:134894-135054:1:exon
so has part: feature:135561-135669:1:exon
so has part: feature:136353-136532:1:exon
so has part: feature:136796-136912:1:exon
so has part: feature:137248-137397:1:exon
so has part: feature:138332-138481:1:exon
so has part: feature:139306-139402:1:exon
so has part: feature:141077-141225:1:exon
so has part: feature:143717-143851:1:exon
so has part: feature:144186-144353:1:exon
so has part: feature:157647-157779:1:exon
so has part: feature:159660-159855:1:exon
so has part: feature:176750-176881:1:exon

XP_030364005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82857-82953:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83842-83919:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84141-84331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:84671-84751:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:85942-86058:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86277-86381:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:86726-86896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:87867-87967:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:88584-88752:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:90161-90253:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:90769-90979:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:91464-91643:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:92073-92203:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:92966-93038:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:93553-93717:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:97472-99694:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:100056-100201:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:100952-101986:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:102877-102967:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:103524-103650:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:104582-104762:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:105610-105792:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:106189-106266:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:108284-108506:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:108951-109161:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:109295-109466:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:109897-110009:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:110563-110772:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:112765-113030:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:113194-113327:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:113989-114144:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:114695-114920:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:115749-115823:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:116567-116773:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:117190-117279:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:118420-118560:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:119766-119888:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:120534-120608:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:122992-123097:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:123776-123928:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:124541-124676:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:125684-125731:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:126425-126575:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:127206-127416:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:128518-128765:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:129402-129593:1:exon

urn:…
SIO_000300: 47
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urn:…
SIO_000300: 48
SIO_000628: feature:130808-130950:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:131516-131646:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:131894-132069:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:132205-132328:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:133162-133397:1:exon

urn:…
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SIO_000628: feature:134134-134242:1:exon

urn:…
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urn:…
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SIO_000628: feature:135561-135669:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:136353-136532:1:exon

urn:…
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SIO_000628: feature:136796-136912:1:exon

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SIO_000628: feature:137248-137397:1:exon

urn:…
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SIO_000628: feature:138332-138481:1:exon

urn:…
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SIO_000628: feature:139306-139402:1:exon

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SIO_000628: feature:141077-141225:1:exon

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SIO_000628: feature:143717-143851:1:exon

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SIO_000628: feature:159660-159855:1:exon

urn:…
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SIO_000628: feature:176750-176881:1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:180634-180874:1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:181652-181783:1:exon

VPS13D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: VPS13D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 13D isoform X5
translation: MLEGLVAWVLNTYLGKYVNNLNTDQLSVALLKGAVELENLPLKKDALKELELPFEVKAGFIGKITLQIPFYRPHVDPWVISVSKLHLIGAPEKKEDFDEEKEKLQEREHKKALLLALEEKWKLKIQDVHLRFEDGVTNPLQPFAFGICIKKVSMQNAVFEPVEKLMRKKQLDVADFSVYWDTNCTLLGDLPPGQLQEAMDKSMESRDHNYIMEPVCTSSLLKRNCSKEPLRSRQTPRLECDIQLETIPLKLSQMQYQQIMGFLKELDRKERQLKFRKWRPKVSVTANCREWWIFALNANLSEIREQRQRSTWEFVLHRAQDAVSYTDLYYTKLKGEPLSAAEQAEMHRIEDEQTYEELKILYEIVHDKIHDLAESIKEPLPYSPGGSPTAESAHGSSTGMLQYLQSWFPGWGGWYGYAQQTYEGEPFEGLLTDPKEQWNPEDILGTDEFFDPAADASSMNTFTKRDHIFAKLNLQLQGGSFTLLHKNKKVVHAEETAFMQLEFSGVKILAESLPRRNSSLLRVQLGGLFLRDLATEGTIFPVLVFPNPQKEVGCMSSFGLQNLSSEMTNQNTDPDAPVFEMLYERNPIHSTFERRLEVSTRPLNIIYNPQAIKKVADFFYKGRVHTSGFGYQSELEARVAEAARRQYNKLKMQTKAEIRQTIDRLLVGDFIENSKSWTVCLDISAPQVIFPDDFKFVDPVLVVVDLGRILLTNSQEESKRSTDTFSSEVNELSDEEYKTPLATPPNTPPPESDTNSGMKMSEFTGLEISEEHLQAHLMSKKMYERYTLSFMDLQIMVGRVKDNWKHVQDSDVGPTHVVEKFNVHLQLERRLIYTSDPKYPGAVLSGSLPDLKIHINEDKILALKNCCAQLSTSETKSSDALHLGKDKIFAEVDQLGSLHDSVMNLTQSVVMLEQHTREVLVESQLLLAEFRVNCMQLGVESNGRYISVLKVFGTNAHFVKRPYDAEVSLTVHGLLLVDTMQTYGTDFDLLMASHKNLSFDVPTGSLRGSRAQSPVCGPRDARPIDAASLAERCTTASSTSSGNNGKDQESLIKLEYQFVSAECPSMNLDSSLQVISVQVNNLDIILNPETIVELICFLQKSFPKEKEDSSPQPLITDLEKDWREQETFQSTYVQNTEVAVDIHWLNILLLRTVGMTNGEKYGRKIATASIGGTKVNVSMCSKFDVNGSLGCLHLMDLTQDSVKNQYVVSIGNTVRYENLIGDVDYLESLFFRLDDGNSLPDALSFTFTEKSKEECSLNLKMASLHYNHSAKFLKELTLSMDELEENFRSMLKSAASKVTTVLATKTAEYSEMVSLFDTTPRSRDVANLEDNEGYGFGSQPLKIDTIKLILNVNIESPIVSIPRKPGSSELLVGHLGQISIQNFVPGEDESTSDRLQVEIKDIKMYSLNSSQFTSKKEPASEVSRGLHSSSGPASISSQDEPHFTRHDFFESLHKGHAFHILNNTTIQFKLEKIPLEKDITFPLSNEDFGISSIMKIEGKFVNPLQVVLAKHVYEQVLQTLDNLIYSEDLNRFPTTSVSSTCHSSPSASLHSTGTEFSSERKENGLFSHSSFNSVPNKLVAIRETKSFTQIQANFRISELQVQLSGDLTLGAQGLVSLKFQDFEVEFAKDHPQTLSIQIALRSLLMEDLLEKNPDSLYKNLMVSRGAPKPSSLAHKEYLSQSCPSVSNVEYPDMPRSLPSHMEEAPNVFQLYQRPVCASRKKQKDDADSEYPLTPPPSPSADRSKLSCGKSNFDDSLVHINIFLVDRKHPEFSSRYNRINRSVDVDFNCLDVLITLQTWVVILDFFGIGSTADNHAMKLQPEDTQQAVKSEINTLSASQAQEPVNTKLDLKVHSLSLVLNKTTSELAKASVSKLAAHLEVIEGDLALQGSIGSLSLSDLTAHGEFYRERFTTSGEEALIFQVFKYGRPDPLLLRECDIRVTLQMASVQYVHTQRFQAEVVSFIQHFTQLQDVLGWQRAAIEGQTVRDKAQRASRVLLDIEA…
SIO_010081: VPS13D
subclass of: SO_0000673
so part of: VPS13D
location: join(82857..82953,83842..83919,84141..84331,85942..86058,86277..86381,86726..86896,87867..87967,88584..88752,90161..90253,90769..90979,91464..91643,92073..92203,92966..93038,93553..93717,94894..95024,95831..95963,97472..99694,100056..100201,100952..101986,102877..102967,103524..103650,104582..104762,105610..105792,106189..106266,108284..108506,108951..109161,109295..109466,109897..110009,110563..110772,112765..113030,113194..113327,113989..114144,114695..114920,115749..115823,116567..116773,117190..117279,118420..118560,119766..119888,120534..120608,122992..123097,123776..123928,124541..124676,125684..125731,126425..126575,127206..127416,128518..128765,129402..129593,129752..129878,130808..130950,131516..131646,131894..132069,132205..132328,133162..133397,134134..134242,134894..135054,135561..135669,136353..136532,136796..136912,137248..137397,138332..138481,139306..139402,141077..141225,143717..143851,144186..144353,157647..157779,159660..159855,176750..176881,180634..180874,181652..181783)
location: region:82857-181783:1
so has part: feature:82857-82953:1:exon
so has part: feature:83842-83919:1:exon
so has part: feature:84141-84331:1:exon
so has part: feature:85942-86058:1:exon
so has part: feature:86277-86381:1:exon
so has part: feature:86726-86896:1:exon
so has part: feature:87867-87967:1:exon
so has part: feature:88584-88752:1:exon
so has part: feature:90161-90253:1:exon
so has part: feature:90769-90979:1:exon
so has part: feature:91464-91643:1:exon
so has part: feature:92073-92203:1:exon
so has part: feature:92966-93038:1:exon
so has part: feature:93553-93717:1:exon
so has part: feature:94894-95024:1:exon
so has part: feature:95831-95963:1:exon
so has part: feature:97472-99694:1:exon
so has part: feature:100056-100201:1:exon
so has part: feature:100952-101986:1:exon
so has part: feature:102877-102967:1:exon
so has part: feature:103524-103650:1:exon
so has part: feature:104582-104762:1:exon
so has part: feature:105610-105792:1:exon
so has part: feature:106189-106266:1:exon
so has part: feature:108284-108506:1:exon
so has part: feature:108951-109161:1:exon
so has part: feature:109295-109466:1:exon
so has part: feature:109897-110009:1:exon
so has part: feature:110563-110772:1:exon
so has part: feature:112765-113030:1:exon
so has part: feature:113194-113327:1:exon
so has part: feature:113989-114144:1:exon
so has part: feature:114695-114920:1:exon
so has part: feature:115749-115823:1:exon
so has part: feature:116567-116773:1:exon
so has part: feature:117190-117279:1:exon
so has part: feature:118420-118560:1:exon
so has part: feature:119766-119888:1:exon
so has part: feature:120534-120608:1:exon
so has part: feature:122992-123097:1:exon
so has part: feature:123776-123928:1:exon
so has part: feature:124541-124676:1:exon
so has part: feature:125684-125731:1:exon
so has part: feature:126425-126575:1:exon
so has part: feature:127206-127416:1:exon
so has part: feature:128518-128765:1:exon
so has part: feature:129402-129593:1:exon
so has part: feature:129752-129878:1:exon
so has part: feature:130808-130950:1:exon
so has part: feature:131516-131646:1:exon
so has part: feature:131894-132069:1:exon
so has part: feature:132205-132328:1:exon
so has part: feature:133162-133397:1:exon
so has part: feature:134134-134242:1:exon
so has part: feature:134894-135054:1:exon
so has part: feature:135561-135669:1:exon
so has part: feature:136353-136532:1:exon
so has part: feature:136796-136912:1:exon
so has part: feature:137248-137397:1:exon
so has part: feature:138332-138481:1:exon
so has part: feature:139306-139402:1:exon
so has part: feature:141077-141225:1:exon
so has part: feature:143717-143851:1:exon
so has part: feature:144186-144353:1:exon
so has part: feature:157647-157779:1:exon
so has part: feature:159660-159855:1:exon

XP_030364002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82857-82953:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83842-83919:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84141-84331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85942-86058:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:86277-86381:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86726-86896:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87867-87967:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:88584-88752:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:90161-90253:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:90769-90979:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:91464-91643:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:92073-92203:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:92966-93038:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:93553-93717:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:94894-95024:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:95831-95963:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:97472-99694:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:100056-100201:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:100952-101986:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:102877-102967:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:103524-103650:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:104582-104762:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:105610-105792:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:106189-106266:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:108284-108506:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:108951-109161:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:109295-109466:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:109897-110009:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:110563-110772:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:112765-113030:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:113194-113327:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:113989-114144:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:114695-114920:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:115749-115823:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:116567-116773:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:117190-117279:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:118420-118560:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:119766-119888:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:120534-120608:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:122992-123097:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:123776-123928:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:124541-124676:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:125684-125731:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:126425-126575:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:127206-127416:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:128518-128765:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:129402-129593:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:129752-129878:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:130808-130950:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:131516-131646:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:131894-132069:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:132205-132328:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:133162-133397:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:134134-134242:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:134894-135054:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:135561-135669:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:136353-136532:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:136796-136912:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:137248-137397:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:138332-138481:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:139306-139402:1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:141077-141225:1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:143717-143851:1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:144186-144353:1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:157647-157779:1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:159660-159855:1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:176750-176881:1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:180634-180874:1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:181652-181783:1:exon

VPS13D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: VPS13D
product: vacuolar protein sorting 13 homolog D, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 135 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030508146.1
SIO_010081: VPS13D
subclass of: SO_0000673
so part of: VPS13D
location: join(84315..84331,84671..84854,85942..86058,86277..86381,86726..86896,87867..87967,88584..88752,90161..90253,90769..90979,91464..91643,92073..92203,92966..93038,93553..93717,94894..95024,95831..95963,97472..99694,100056..100201,100952..101986,102877..102967,103524..103650,104582..104762,105610..105792,106189..106266,108284..108506,108951..109161,109295..109466,109897..110009,110563..110772,112765..113030,113194..113327,113989..114144,114695..114920,115749..115823,116567..116773,117190..117279,118420..118560,119766..119888,120534..120608,122992..123097,123776..123928,124541..124676,125684..125731,126425..126575,127206..127416,128518..128765,129402..129593,129752..129878,130808..130950,131516..131646,131894..132069,132205..132328,133162..133397,134134..134242,134894..135054,135561..135669,136353..136532,136796..136912,137248..137397,138332..138481,139306..139402,141077..141225,143717..143851,144186..144353,157647..157779,159660..159855,176750..176881,180634..180874,181652..182770)
location: region:84315-182770:1
so has part: feature:84315-84331:1:exon
so has part: feature:84671-84854:1:exon
so has part: feature:85942-86058:1:exon
so has part: feature:86277-86381:1:exon
so has part: feature:86726-86896:1:exon
so has part: feature:87867-87967:1:exon
so has part: feature:88584-88752:1:exon
so has part: feature:90161-90253:1:exon
so has part: feature:90769-90979:1:exon
so has part: feature:91464-91643:1:exon
so has part: feature:92073-92203:1:exon
so has part: feature:92966-93038:1:exon
so has part: feature:93553-93717:1:exon
so has part: feature:94894-95024:1:exon
so has part: feature:95831-95963:1:exon
so has part: feature:97472-99694:1:exon
so has part: feature:100056-100201:1:exon
so has part: feature:100952-101986:1:exon
so has part: feature:102877-102967:1:exon
so has part: feature:103524-103650:1:exon
so has part: feature:104582-104762:1:exon
so has part: feature:105610-105792:1:exon
so has part: feature:106189-106266:1:exon
so has part: feature:108284-108506:1:exon
so has part: feature:108951-109161:1:exon
so has part: feature:109295-109466:1:exon
so has part: feature:109897-110009:1:exon
so has part: feature:110563-110772:1:exon
so has part: feature:112765-113030:1:exon
so has part: feature:113194-113327:1:exon
so has part: feature:113989-114144:1:exon
so has part: feature:114695-114920:1:exon
so has part: feature:115749-115823:1:exon
so has part: feature:116567-116773:1:exon
so has part: feature:117190-117279:1:exon
so has part: feature:118420-118560:1:exon
so has part: feature:119766-119888:1:exon
so has part: feature:120534-120608:1:exon
so has part: feature:122992-123097:1:exon
so has part: feature:123776-123928:1:exon
so has part: feature:124541-124676:1:exon
so has part: feature:125684-125731:1:exon
so has part: feature:126425-126575:1:exon
so has part: feature:127206-127416:1:exon
so has part: feature:128518-128765:1:exon
so has part: feature:129402-129593:1:exon
so has part: feature:129752-129878:1:exon
so has part: feature:130808-130950:1:exon
so has part: feature:131516-131646:1:exon
so has part: feature:131894-132069:1:exon
so has part: feature:132205-132328:1:exon
so has part: feature:133162-133397:1:exon
so has part: feature:134134-134242:1:exon
so has part: feature:134894-135054:1:exon
so has part: feature:135561-135669:1:exon
so has part: feature:136353-136532:1:exon
so has part: feature:136796-136912:1:exon
so has part: feature:137248-137397:1:exon
so has part: feature:138332-138481:1:exon
so has part: feature:139306-139402:1:exon
so has part: feature:141077-141225:1:exon
so has part: feature:143717-143851:1:exon
so has part: feature:144186-144353:1:exon
so has part: feature:157647-157779:1:exon
so has part: feature:159660-159855:1:exon
so has part: feature:176750-176881:1:exon
so has part: feature:180634-180874:1:exon

position:84315:1
position: 84315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84315-84331:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:84671-84854:1:exon

position:84854:1
position: 84854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:85942-86058:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:86277-86381:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:86726-86896:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:87867-87967:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:88584-88752:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:90161-90253:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:90769-90979:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:91464-91643:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:92073-92203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:92966-93038:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:93553-93717:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:94894-95024:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:95831-95963:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:97472-99694:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:100056-100201:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:100952-101986:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:102877-102967:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:103524-103650:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:104582-104762:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:105610-105792:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:106189-106266:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:108284-108506:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:108951-109161:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:109295-109466:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:109897-110009:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:110563-110772:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:112765-113030:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:113194-113327:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:113989-114144:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:114695-114920:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:115749-115823:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:116567-116773:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:117190-117279:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:118420-118560:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:119766-119888:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:120534-120608:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:122992-123097:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:123776-123928:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:124541-124676:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:125684-125731:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:126425-126575:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:127206-127416:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:128518-128765:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:129402-129593:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:129752-129878:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:130808-130950:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:131516-131646:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:131894-132069:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:132205-132328:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:133162-133397:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:134134-134242:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:134894-135054:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:135561-135669:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:136353-136532:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:136796-136912:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:137248-137397:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:138332-138481:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:139306-139402:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:141077-141225:1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:143717-143851:1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:144186-144353:1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:157647-157779:1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:159660-159855:1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:176750-176881:1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:180634-180874:1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:181652-182770:1:exon

VPS13D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: VPS13D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 13D isoform X8
translation: MQNAVFEPVEKLMRKKQLDVADFSVYWDTNCTLLGDLPPGQLQEAMDKSMESRDHNYIMEPVCTSSLLKRNCSKEPLRSRQTPRLECDIQLETIPLKLSQMQYQQIMGFLKELDRKERQLKFRKWRPKVSVTANCREWWIFALNANLSEIREQRQRSTWEFVLHRAQDAVSYTDLYYTKLKGEPLSAAEQAEMHRIEDEQTYEELKILYEIVHDKIHDLAESIKEPLPYSPGGSPTAESAHGSSTGMLQYLQSWFPGWGGWYGYAQQTYEGEPFEGLLTDPKEQWNPEDILGTDEFFDPAADASSMNTFTKRDHIFAKLNLQLQGGSFTLLHKNKKVVHAEETAFMQLEFSGVKILAESLPRRNSSLLRVQLGGLFLRDLATEGTIFPVLVFPNPQKEVGCMSSFGLQNLSSEMTNQNTDPDAPVFEMLYERNPIHSTFERRLEVSTRPLNIIYNPQAIKKVADFFYKGRVHTSGFGYQSELEARVAEAARRQYNKLKMQTKAEIRQTIDRLLVGDFIENSKSWTVCLDISAPQVIFPDDFKFVDPVLVVVDLGRILLTNSQEESKRSTDTFSSEVNELSDEEYKTPLATPPNTPPPESDTNSGMKMSEFTGLEISEEHLQAHLMSKKMYERYTLSFMDLQIMVGRVKDNWKHVQDSDVGPTHVVEKFNVHLQLERRLIYTSDPKYPGAVLSGSLPDLKIHINEDKILALKNCCAQLSTSETKSSDALHLGKDKIFAEVDQLGSLHDSVMNLTQSVVMLEQHTREVLVESQLLLAEFRVNCMQLGVESNGRYISVLKVFGTNAHFVKRPYDAEVSLTVHGLLLVDTMQTYGTDFDLLMASHKNLSFDVPTGSLRGSRAQSPVCGPRDARPIDAASLAERCTTASSTSSGNNGKDQESLIKLEYQFVSAECPSMNLDSSLQVISVQVNNLDIILNPETIVELICFLQKSFPKEKEDSSPQPLITDLEKDWREQETFQSTYVQNTEVAVDIHWLNILLLRTVGMTNGEKYGRKIATASIGGTKVNVSMCSKFDVNGSLGCLHLMDLTQDSVKNQYVVSIGNTVRYENLIGDVDYLESLFFRLDDGNSLPDALSFTFTEKSKEECSLNLKMASLHYNHSAKFLKELTLSMDELEENFRSMLKSAASKVTTVLATKTAEYSEMVSLFDTTPRSRDVANLEDNEGYGFGSQPLKIDTIKLILNVNIESPIVSIPRKPGSSELLVGHLGQISIQNFVPGEDESTSDRLQVEIKDIKMYSLNSSQFTSKKEPASEVSRGLHSSSGPASISSQDEPHFTRHDFFESLHKGHAFHILNNTTIQFKLEKIPLEKDITFPLSNEDFGISSIMKIEGKFVNPLQVVLAKHVYEQVLQTLDNLIYSEDLNRFPTTSVSSTCHSSPSASLHSTGTEFSSERKENGLFSHSSFNSVPNKLVAIRETKSFTQIQANFRISELQVQLSGDLTLGAQGLVSLKFQDFEVEFAKDHPQTLSIQIALRSLLMEDLLEKNPDSLYKNLMVSRGAPKPSSLAHKEYLSQSCPSVSNVEYPDMPRSLPSHMEEAPNVFQLYQRPVCASRKKQKDDADSEYPLTPPPSPSADRSKLSCGKSNFDDSLVHINIFLVDRKHPEFSSRYNRINRSVDVDFNCLDVLITLQTWVVILDFFGIGSTADNHAMKLQPEDTQQAVKSEINTLSASQAQEPVNTKLDLKVHSLSLVLNKTTSELAKASVSKLAAHLEVIEGDLALQGSIGSLSLSDLTAHGEFYRERFTTSGEEALIFQVFKYGRPDPLLLRECDIRVTLQMASVQYVHTQRFQAEVVSFIQHFTQLQDVLGWQRAAIEGQTVRDKAQRASRVLLDIEAGAPVLLIPESSKSNSLIVANLGKLKVKNRFLFAGMPGTFSLKNKGYFSSANSRKQRSVWGETCWNTLENRQDSVQFSSPLGTPKHSMKKTTSADESKVAMEGLFMKKSSGMNTSKLKSEPVLNTLSKQQGQQPKLPVVLNPDSPEDHICLLDC…
SIO_010081: VPS13D
subclass of: SO_0000673
so part of: VPS13D
location: join(86035..86058,86277..86381,86726..86896,87867..87967,88584..88752,90161..90253,90769..90979,91464..91643,92073..92203,92966..93038,93553..93717,94894..95024,95831..95963,97472..99694,100056..100201,100952..101986,102877..102967,103524..103650,104582..104762,105610..105792,106189..106266,108284..108506,108951..109161,109295..109466,109897..110009,110563..110772,112765..113030,113194..113327,113989..114144,114695..114920,115749..115823,116567..116773,117190..117279,118420..118560,119766..119888,120534..120608,122992..123097,123776..123928,124541..124676,125684..125731,126425..126575,127206..127416,128518..128765,129402..129593,129752..129878,130808..130950,131516..131646,131894..132069,132205..132328,133162..133397,134134..134242,134894..135054,135561..135669,136353..136532,136796..136912,137248..137397,138332..138481,139306..139402,141077..141225,143717..143851,144186..144353,157647..157779,159660..159855,176750..176881,180634..180874,181652..181783)
location: region:86035-181783:1
so has part: feature:86035-86058:1:exon
so has part: feature:86277-86381:1:exon
so has part: feature:86726-86896:1:exon
so has part: feature:87867-87967:1:exon
so has part: feature:88584-88752:1:exon
so has part: feature:90161-90253:1:exon
so has part: feature:90769-90979:1:exon
so has part: feature:91464-91643:1:exon
so has part: feature:92073-92203:1:exon
so has part: feature:92966-93038:1:exon
so has part: feature:93553-93717:1:exon
so has part: feature:94894-95024:1:exon
so has part: feature:95831-95963:1:exon
so has part: feature:97472-99694:1:exon
so has part: feature:100056-100201:1:exon
so has part: feature:100952-101986:1:exon
so has part: feature:102877-102967:1:exon
so has part: feature:103524-103650:1:exon
so has part: feature:104582-104762:1:exon
so has part: feature:105610-105792:1:exon
so has part: feature:106189-106266:1:exon
so has part: feature:108284-108506:1:exon
so has part: feature:108951-109161:1:exon
so has part: feature:109295-109466:1:exon
so has part: feature:109897-110009:1:exon
so has part: feature:110563-110772:1:exon
so has part: feature:112765-113030:1:exon
so has part: feature:113194-113327:1:exon
so has part: feature:113989-114144:1:exon
so has part: feature:114695-114920:1:exon
so has part: feature:115749-115823:1:exon
so has part: feature:116567-116773:1:exon
so has part: feature:117190-117279:1:exon
so has part: feature:118420-118560:1:exon
so has part: feature:119766-119888:1:exon
so has part: feature:120534-120608:1:exon
so has part: feature:122992-123097:1:exon
so has part: feature:123776-123928:1:exon
so has part: feature:124541-124676:1:exon
so has part: feature:125684-125731:1:exon
so has part: feature:126425-126575:1:exon
so has part: feature:127206-127416:1:exon
so has part: feature:128518-128765:1:exon
so has part: feature:129402-129593:1:exon
so has part: feature:129752-129878:1:exon
so has part: feature:130808-130950:1:exon
so has part: feature:131516-131646:1:exon
so has part: feature:131894-132069:1:exon
so has part: feature:132205-132328:1:exon
so has part: feature:133162-133397:1:exon
so has part: feature:134134-134242:1:exon
so has part: feature:134894-135054:1:exon
so has part: feature:135561-135669:1:exon
so has part: feature:136353-136532:1:exon
so has part: feature:136796-136912:1:exon
so has part: feature:137248-137397:1:exon
so has part: feature:138332-138481:1:exon
so has part: feature:139306-139402:1:exon
so has part: feature:141077-141225:1:exon
so has part: feature:143717-143851:1:exon
so has part: feature:144186-144353:1:exon
so has part: feature:157647-157779:1:exon
so has part: feature:159660-159855:1:exon
so has part: feature:176750-176881:1:exon
so has part: feature:180634-180874:1:exon
so has part: feature:181652-181783:1:exon

XP_030364006.1
type: Protein
SIO_000068: ncbiprotein

position:86035:1
position: 86035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86035-86058:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86277-86381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:86726-86896:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:87867-87967:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88584-88752:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:90161-90253:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90769-90979:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:91464-91643:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:92073-92203:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:92966-93038:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:93553-93717:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:94894-95024:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:95831-95963:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:97472-99694:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:100056-100201:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:100952-101986:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:102877-102967:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:103524-103650:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:104582-104762:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:105610-105792:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:106189-106266:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:108284-108506:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:108951-109161:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:109295-109466:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:109897-110009:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:110563-110772:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:112765-113030:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:113194-113327:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:113989-114144:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:114695-114920:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:115749-115823:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:116567-116773:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:117190-117279:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:118420-118560:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:119766-119888:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:120534-120608:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:122992-123097:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:123776-123928:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:124541-124676:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:125684-125731:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:126425-126575:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:127206-127416:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:128518-128765:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:129402-129593:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:129752-129878:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:130808-130950:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:131516-131646:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:131894-132069:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:132205-132328:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:133162-133397:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:134134-134242:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:134894-135054:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:135561-135669:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:136353-136532:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:136796-136912:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:137248-137397:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:138332-138481:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:139306-139402:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:141077-141225:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:143717-143851:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:144186-144353:1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:157647-157779:1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:159660-159855:1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:176750-176881:1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:180634-180874:1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:181652-181783:1:exon

VPS13D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: VPS13D
product: vacuolar protein sorting 13 homolog D, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 133 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030508147.1
SIO_010081: VPS13D
subclass of: SO_0000673
so part of: VPS13D
location: join(90169..90253,90803..90979,91464..91643,92073..92203,92966..93038,93553..93717,94894..95024,95831..95963,97472..99694,100056..100201,100952..101986,102877..102967,103524..103650,104582..104762,105610..105792,106189..106266,108284..108506,108951..109161,109295..109466,109897..110009,110563..110772,112765..113030,113194..113327,113989..114144,114695..114920,115749..115823,116567..116773,117190..117279,118420..118560,119766..119888,120534..120608,122992..123097,123776..123928,124541..124676,125684..125731,126425..126575,127206..127416,128518..128765,129402..129593,129752..129878,130808..130950,131516..131646,131894..132069,132205..132328,133162..133397,134134..134242,134894..135054,135561..135669,136353..136532,136796..136912,137248..137397,138332..138481,139306..139402,141077..141225,143717..143851,144186..144353,157647..157779,159660..159855,176750..176881,180634..180874,181652..182770)
location: region:90169-182770:1
so has part: feature:90169-90253:1:exon
so has part: feature:90803-90979:1:exon
so has part: feature:91464-91643:1:exon
so has part: feature:92073-92203:1:exon
so has part: feature:92966-93038:1:exon
so has part: feature:93553-93717:1:exon
so has part: feature:94894-95024:1:exon
so has part: feature:95831-95963:1:exon
so has part: feature:97472-99694:1:exon
so has part: feature:100056-100201:1:exon
so has part: feature:100952-101986:1:exon
so has part: feature:102877-102967:1:exon
so has part: feature:103524-103650:1:exon
so has part: feature:104582-104762:1:exon
so has part: feature:105610-105792:1:exon
so has part: feature:106189-106266:1:exon
so has part: feature:108284-108506:1:exon
so has part: feature:108951-109161:1:exon
so has part: feature:109295-109466:1:exon
so has part: feature:109897-110009:1:exon
so has part: feature:110563-110772:1:exon
so has part: feature:112765-113030:1:exon
so has part: feature:113194-113327:1:exon
so has part: feature:113989-114144:1:exon
so has part: feature:114695-114920:1:exon
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so has part: feature:180634-180874:1:exon
so has part: feature:181652-182770:1:exon

position:90169:1
position: 90169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90169-90253:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90803-90979:1:exon

position:90803:1
position: 90803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
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urn:…
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urn:…
SIO_000300: 19
SIO_000628: feature:109295-109466:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:109897-110009:1:exon

urn:…
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SIO_000628: feature:110563-110772:1:exon

urn:…
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SIO_000628: feature:112765-113030:1:exon

urn:…
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SIO_000628: feature:113194-113327:1:exon

urn:…
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urn:…
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SIO_000628: feature:114695-114920:1:exon

urn:…
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SIO_000628: feature:115749-115823:1:exon

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SIO_000628: feature:116567-116773:1:exon

urn:…
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SIO_000628: feature:117190-117279:1:exon

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SIO_000628: feature:118420-118560:1:exon

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SIO_000628: feature:119766-119888:1:exon

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urn:…
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SIO_000628: feature:123776-123928:1:exon

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SIO_000628: feature:125684-125731:1:exon

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SIO_000628: feature:136796-136912:1:exon

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SIO_000628: feature:137248-137397:1:exon

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SIO_000628: feature:138332-138481:1:exon

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SIO_000628: feature:139306-139402:1:exon

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SIO_000628: feature:180634-180874:1:exon

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VPS13D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: VPS13D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 13D isoform X9
translation: MLQYLQSWFPGWGGWYGYAQQTYEGEPFEGLLTDPKEQWNPEDILGTDEFFDPAADASSMNTFTKRDHIFAKLNLQLQGGSFTLLHKNKKVVHAEETAFMQLEFSGVKILAESLPRRNSSLLRVQLGGLFLRDLATEGTIFPVLVFPNPQKEVGCMSSFGLQNLSSEMTNQNTDPDAPVFEMLYERNPIHSTFERRLEVSTRPLNIIYNPQAIKKVADFFYKGRVHTSGFGYQSELEARVAEAARRQYNKLKMQTKAEIRQTIDRLLVGDFIENSKSWTVCLDISAPQVIFPDDFKFVDPVLVVVDLGRILLTNSQEESKRSTDTFSSEVNELSDEEYKTPLATPPNTPPPESDTNSGMKMSEFTGLEISEEHLQAHLMSKKMYERYTLSFMDLQIMVGRVKDNWKHVQDSDVGPTHVVEKFNVHLQLERRLIYTSDPKYPGAVLSGSLPDLKIHINEDKILALKNCCAQLSTSETKSSDALHLGKDKIFAEVDQLGSLHDSVMNLTQSVVMLEQHTREVLVESQLLLAEFRVNCMQLGVESNGRYISVLKVFGTNAHFVKRPYDAEVSLTVHGLLLVDTMQTYGTDFDLLMASHKNLSFDVPTGSLRGSRAQSPVCGPRDARPIDAASLAERCTTASSTSSGNNGKDQESLIKLEYQFVSAECPSMNLDSSLQVISVQVNNLDIILNPETIVELICFLQKSFPKEKEDSSPQPLITDLEKDWREQETFQSTYVQNTEVAVDIHWLNILLLRTVGMTNGEKYGRKIATASIGGTKVNVSMCSKFDVNGSLGCLHLMDLTQDSVKNQYVVSIGNTVRYENLIGDVDYLESLFFRLDDGNSLPDALSFTFTEKSKEECSLNLKMASLHYNHSAKFLKELTLSMDELEENFRSMLKSAASKVTTVLATKTAEYSEMVSLFDTTPRSRDVANLEDNEGYGFGSQPLKIDTIKLILNVNIESPIVSIPRKPGSSELLVGHLGQISIQNFVPGEDESTSDRLQVEIKDIKMYSLNSSQFTSKKEPASEVSRGLHSSSGPASISSQDEPHFTRHDFFESLHKGHAFHILNNTTIQFKLEKIPLEKDITFPLSNEDFGISSIMKIEGKFVNPLQVVLAKHVYEQVLQTLDNLIYSEDLNRFPTTSVSSTCHSSPSASLHSTGTEFSSERKENGLFSHSSFNSVPNKLVAIRETKSFTQIQANFRISELQVQLSGDLTLGAQGLVSLKFQDFEVEFAKDHPQTLSIQIALRSLLMEDLLEKNPDSLYKNLMVSRGAPKPSSLAHKEYLSQSCPSVSNVEYPDMPRSLPSHMEEAPNVFQLYQRPVCASRKKQKDDADSEYPLTPPPSPSADRSKLSCGKSNFDDSLVHINIFLVDRKHPEFSSRYNRINRSVDVDFNCLDVLITLQTWVVILDFFGIGSTADNHAMKLQPEDTQQAVKSEINTLSASQAQEPVNTKLDLKVHSLSLVLNKTTSELAKASVSKLAAHLEVIEGDLALQGSIGSLSLSDLTAHGEFYRERFTTSGEEALIFQVFKYGRPDPLLLRECDIRVTLQMASVQYVHTQRFQAEVVSFIQHFTQLQDVLGWQRAAIEGQTVRDKAQRASRVLLDIEAGAPVLLIPESSKSNSLIVANLGKLKVKNRFLFAGMPGTFSLKNKGYFSSANSRKQRSVWGETCWNTLENRQDSVQFSSPLGTPKHSMKKTTSADESKVAMEGLFMKKSSGMNTSKLKSEPVLNTLSKQQGQQPKLPVVLNPDSPEDHICLLDCIVVDLQDMDIFAAERYHREYSKAMEDTNADLSFPSYFVRQTGGSLLTEPFRLKLQVERNLDKELSHAVADISIHGNLSSVHCSLDLNKYKLIRGLLENNLGEPIEEFMRPYDLQDPRIHTVLSGEVYTSMSFLIDMVNVSLELTDPKGKDGCSSLARFDFKKSKLLFESSSNGTKSVNLVSHSMMAFDTRYAGQKSATGTPNLFNCIFQSSKNTSSPGAIQIELHFRSTKDSSSFTVVLNNLRVFL…
SIO_010081: VPS13D
subclass of: SO_0000673
so part of: VPS13D
location: join(90844..90979,91464..91643,92073..92203,92966..93038,93553..93717,94894..95024,95831..95963,97472..99694,100056..100201,100952..101986,102877..102967,103524..103650,104582..104762,105610..105792,106189..106266,108284..108506,108951..109161,109295..109466,109897..110009,110563..110772,112765..113030,113194..113327,113989..114144,114695..114920,115749..115823,116567..116773,117190..117279,118420..118560,119766..119888,120534..120608,122992..123097,123776..123928,124541..124676,125684..125731,126425..126575,127206..127416,128518..128765,129402..129593,129752..129878,130808..130950,131516..131646,131894..132069,132205..132328,133162..133397,134134..134242,134894..135054,135561..135669,136353..136532,136796..136912,137248..137397,138332..138481,139306..139402,141077..141225,143717..143851,144186..144353,157647..157779,159660..159855,176750..176881,180634..180874,181652..181783)
location: region:90844-181783:1
so has part: feature:90844-90979:1:exon
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so has part: feature:176750-176881:1:exon
so has part: feature:180634-180874:1:exon
so has part: feature:181652-181783:1:exon

XP_030364007.1
type: Protein
SIO_000068: ncbiprotein

position:90844:1
position: 90844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90844-90979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91464-91643:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92073-92203:1:exon

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urn:…
SIO_000300: 5
SIO_000628: feature:93553-93717:1:exon

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SIO_000628: feature:94894-95024:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:95831-95963:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:97472-99694:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:100056-100201:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:100952-101986:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:102877-102967:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:103524-103650:1:exon

urn:…
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urn:…
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SIO_000628: feature:109897-110009:1:exon

urn:…
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SIO_000628: feature:110563-110772:1:exon

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SIO_000628: feature:113194-113327:1:exon

urn:…
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SIO_000628: feature:113989-114144:1:exon

urn:…
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SIO_000628: feature:114695-114920:1:exon

urn:…
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urn:…
SIO_000300: 26
SIO_000628: feature:116567-116773:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:117190-117279:1:exon

urn:…
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SIO_000628: feature:118420-118560:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:119766-119888:1:exon

urn:…
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SIO_000628: feature:120534-120608:1:exon

urn:…
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SIO_000628: feature:122992-123097:1:exon

urn:…
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SIO_000628: feature:123776-123928:1:exon

urn:…
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urn:…
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SIO_000628: feature:125684-125731:1:exon

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urn:…
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urn:…
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SIO_000628: feature:129752-129878:1:exon

urn:…
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urn:…
SIO_000300: 41
SIO_000628: feature:131516-131646:1:exon

urn:…
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SIO_000628: feature:131894-132069:1:exon

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urn:…
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SIO_000628: feature:139306-139402:1:exon

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urn:…
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SIO_000628: feature:143717-143851:1:exon

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SIO_000628: feature:144186-144353:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:157647-157779:1:exon

urn:…
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SIO_000628: feature:159660-159855:1:exon

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urn:…
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VPS13D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: VPS13D
product: vacuolar protein sorting 13 homolog D, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 133 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030508148.1
SIO_010081: VPS13D
subclass of: SO_0000673
so part of: VPS13D
location: join(90892..90979,91556..91643,92073..92203,92966..93038,93553..93717,94894..95024,95831..95963,97472..99694,100056..100201,100952..101986,102877..102967,103524..103650,104582..104762,105610..105792,106189..106266,108284..108506,108951..109161,109295..109466,109897..110009,110563..110772,112765..113030,113194..113327,113989..114144,114695..114920,115749..115823,116567..116773,117190..117279,118420..118560,119766..119888,120534..120608,122992..123097,123776..123928,124541..124676,125684..125731,126425..126575,127206..127416,128518..128765,129402..129593,129752..129878,130808..130950,131516..131646,131894..132069,132205..132328,133162..133397,134134..134242,134894..135054,135561..135669,136353..136532,136796..136912,137248..137397,138332..138481,139306..139402,141077..141225,143717..143851,144186..144353,157647..157779,159660..159855,176750..176881,180634..180874,181652..182770)
location: region:90892-182770:1
so has part: feature:90892-90979:1:exon
so has part: feature:91556-91643:1:exon
so has part: feature:92073-92203:1:exon
so has part: feature:92966-93038:1:exon
so has part: feature:93553-93717:1:exon
so has part: feature:94894-95024:1:exon
so has part: feature:95831-95963:1:exon
so has part: feature:97472-99694:1:exon
so has part: feature:100056-100201:1:exon
so has part: feature:100952-101986:1:exon
so has part: feature:102877-102967:1:exon
so has part: feature:103524-103650:1:exon
so has part: feature:104582-104762:1:exon
so has part: feature:105610-105792:1:exon
so has part: feature:106189-106266:1:exon
so has part: feature:108284-108506:1:exon
so has part: feature:108951-109161:1:exon
so has part: feature:109295-109466:1:exon
so has part: feature:109897-110009:1:exon
so has part: feature:110563-110772:1:exon
so has part: feature:112765-113030:1:exon
so has part: feature:113194-113327:1:exon
so has part: feature:113989-114144:1:exon
so has part: feature:114695-114920:1:exon
so has part: feature:115749-115823:1:exon
so has part: feature:116567-116773:1:exon
so has part: feature:117190-117279:1:exon
so has part: feature:118420-118560:1:exon
so has part: feature:119766-119888:1:exon
so has part: feature:120534-120608:1:exon
so has part: feature:122992-123097:1:exon
so has part: feature:123776-123928:1:exon
so has part: feature:124541-124676:1:exon
so has part: feature:125684-125731:1:exon
so has part: feature:126425-126575:1:exon
so has part: feature:127206-127416:1:exon
so has part: feature:128518-128765:1:exon
so has part: feature:129402-129593:1:exon
so has part: feature:129752-129878:1:exon
so has part: feature:130808-130950:1:exon
so has part: feature:131516-131646:1:exon
so has part: feature:131894-132069:1:exon
so has part: feature:132205-132328:1:exon
so has part: feature:133162-133397:1:exon
so has part: feature:134134-134242:1:exon
so has part: feature:134894-135054:1:exon
so has part: feature:135561-135669:1:exon
so has part: feature:136353-136532:1:exon
so has part: feature:136796-136912:1:exon
so has part: feature:137248-137397:1:exon
so has part: feature:138332-138481:1:exon
so has part: feature:139306-139402:1:exon
so has part: feature:141077-141225:1:exon
so has part: feature:143717-143851:1:exon
so has part: feature:144186-144353:1:exon
so has part: feature:157647-157779:1:exon
so has part: feature:159660-159855:1:exon
so has part: feature:176750-176881:1:exon
so has part: feature:180634-180874:1:exon
so has part: feature:181652-182770:1:exon

position:90892:1
position: 90892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90892-90979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91556-91643:1:exon

position:91556:1
position: 91556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:92073-92203:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:92966-93038:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:93553-93717:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94894-95024:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:95831-95963:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:97472-99694:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:100056-100201:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:100952-101986:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:102877-102967:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:103524-103650:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:104582-104762:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:105610-105792:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:106189-106266:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:108284-108506:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:108951-109161:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:109295-109466:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:109897-110009:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:110563-110772:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:112765-113030:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:113194-113327:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:113989-114144:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:114695-114920:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:115749-115823:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:116567-116773:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:117190-117279:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:118420-118560:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:119766-119888:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:120534-120608:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:122992-123097:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:123776-123928:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:124541-124676:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:125684-125731:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:126425-126575:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:127206-127416:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:128518-128765:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:129402-129593:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:129752-129878:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:130808-130950:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:131516-131646:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:131894-132069:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:132205-132328:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:133162-133397:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:134134-134242:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:134894-135054:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:135561-135669:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:136353-136532:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:136796-136912:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:137248-137397:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:138332-138481:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:139306-139402:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:141077-141225:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:143717-143851:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:144186-144353:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:157647-157779:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:159660-159855:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:176750-176881:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:180634-180874:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:181652-182770:1:exon

VPS13D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: VPS13D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 13D isoform X10
translation: MQLEFSGVKILAESLPRRNSSLLRVQLGGLFLRDLATEGTIFPVLVFPNPQKEVGCMSSFGLQNLSSEMTNQNTDPDAPVFEMLYERNPIHSTFERRLEVSTRPLNIIYNPQAIKKVADFFYKGRVHTSGFGYQSELEARVAEAARRQYNKLKMQTKAEIRQTIDRLLVGDFIENSKSWTVCLDISAPQVIFPDDFKFVDPVLVVVDLGRILLTNSQEESKRSTDTFSSEVNELSDEEYKTPLATPPNTPPPESDTNSGMKMSEFTGLEISEEHLQAHLMSKKMYERYTLSFMDLQIMVGRVKDNWKHVQDSDVGPTHVVEKFNVHLQLERRLIYTSDPKYPGAVLSGSLPDLKIHINEDKILALKNCCAQLSTSETKSSDALHLGKDKIFAEVDQLGSLHDSVMNLTQSVVMLEQHTREVLVESQLLLAEFRVNCMQLGVESNGRYISVLKVFGTNAHFVKRPYDAEVSLTVHGLLLVDTMQTYGTDFDLLMASHKNLSFDVPTGSLRGSRAQSPVCGPRDARPIDAASLAERCTTASSTSSGNNGKDQESLIKLEYQFVSAECPSMNLDSSLQVISVQVNNLDIILNPETIVELICFLQKSFPKEKEDSSPQPLITDLEKDWREQETFQSTYVQNTEVAVDIHWLNILLLRTVGMTNGEKYGRKIATASIGGTKVNVSMCSKFDVNGSLGCLHLMDLTQDSVKNQYVVSIGNTVRYENLIGDVDYLESLFFRLDDGNSLPDALSFTFTEKSKEECSLNLKMASLHYNHSAKFLKELTLSMDELEENFRSMLKSAASKVTTVLATKTAEYSEMVSLFDTTPRSRDVANLEDNEGYGFGSQPLKIDTIKLILNVNIESPIVSIPRKPGSSELLVGHLGQISIQNFVPGEDESTSDRLQVEIKDIKMYSLNSSQFTSKKEPASEVSRGLHSSSGPASISSQDEPHFTRHDFFESLHKGHAFHILNNTTIQFKLEKIPLEKDITFPLSNEDFGISSIMKIEGKFVNPLQVVLAKHVYEQVLQTLDNLIYSEDLNRFPTTSVSSTCHSSPSASLHSTGTEFSSERKENGLFSHSSFNSVPNKLVAIRETKSFTQIQANFRISELQVQLSGDLTLGAQGLVSLKFQDFEVEFAKDHPQTLSIQIALRSLLMEDLLEKNPDSLYKNLMVSRGAPKPSSLAHKEYLSQSCPSVSNVEYPDMPRSLPSHMEEAPNVFQLYQRPVCASRKKQKDDADSEYPLTPPPSPSADRSKLSCGKSNFDDSLVHINIFLVDRKHPEFSSRYNRINRSVDVDFNCLDVLITLQTWVVILDFFGIGSTADNHAMKLQPEDTQQAVKSEINTLSASQAQEPVNTKLDLKVHSLSLVLNKTTSELAKASVSKLAAHLEVIEGDLALQGSIGSLSLSDLTAHGEFYRERFTTSGEEALIFQVFKYGRPDPLLLRECDIRVTLQMASVQYVHTQRFQAEVVSFIQHFTQLQDVLGWQRAAIEGQTVRDKAQRASRVLLDIEAGAPVLLIPESSKSNSLIVANLGKLKVKNRFLFAGMPGTFSLKNKGYFSSANSRKQRSVWGETCWNTLENRQDSVQFSSPLGTPKHSMKKTTSADESKVAMEGLFMKKSSGMNTSKLKSEPVLNTLSKQQGQQPKLPVVLNPDSPEDHICLLDCIVVDLQDMDIFAAERYHREYSKAMEDTNADLSFPSYFVRQTGGSLLTEPFRLKLQVERNLDKELSHAVADISIHGNLSSVHCSLDLNKYKLIRGLLENNLGEPIEEFMRPYDLQDPRIHTVLSGEVYTSMSFLIDMVNVSLELTDPKGKDGCSSLARFDFKKSKLLFESSSNGTKSVNLVSHSMMAFDTRYAGQKSATGTPNLFNCIFQSSKNTSSPGAIQIELHFRSTKDSSSFTVVLNNLRVFLIFDWLLLVHDFLYTPGSSKKRETHLSSRQRTYSSETTVVPKAVKSGVVTKRSSLHVSTEKQLEVKVNVTGTEFVVVEDMSCFDTNAIILKGTTVLTYKP…
SIO_010081: VPS13D
subclass of: SO_0000673
so part of: VPS13D
location: join(91625..91643,92073..92203,92966..93038,93553..93717,94894..95024,95831..95963,97472..99694,100056..100201,100952..101986,102877..102967,103524..103650,104582..104762,105610..105792,106189..106266,108284..108506,108951..109161,109295..109466,109897..110009,110563..110772,112765..113030,113194..113327,113989..114144,114695..114920,115749..115823,116567..116773,117190..117279,118420..118560,119766..119888,120534..120608,122992..123097,123776..123928,124541..124676,125684..125731,126425..126575,127206..127416,128518..128765,129402..129593,129752..129878,130808..130950,131516..131646,131894..132069,132205..132328,133162..133397,134134..134242,134894..135054,135561..135669,136353..136532,136796..136912,137248..137397,138332..138481,139306..139402,141077..141225,143717..143851,144186..144353,157647..157779,159660..159855,176750..176881,180634..180874,181652..181783)
location: region:91625-181783:1
so has part: feature:91625-91643:1:exon
so has part: feature:92073-92203:1:exon
so has part: feature:92966-93038:1:exon
so has part: feature:93553-93717:1:exon
so has part: feature:94894-95024:1:exon
so has part: feature:95831-95963:1:exon
so has part: feature:97472-99694:1:exon
so has part: feature:100056-100201:1:exon
so has part: feature:100952-101986:1:exon
so has part: feature:102877-102967:1:exon
so has part: feature:103524-103650:1:exon
so has part: feature:104582-104762:1:exon
so has part: feature:105610-105792:1:exon
so has part: feature:106189-106266:1:exon
so has part: feature:108284-108506:1:exon
so has part: feature:108951-109161:1:exon
so has part: feature:109295-109466:1:exon
so has part: feature:109897-110009:1:exon
so has part: feature:110563-110772:1:exon
so has part: feature:112765-113030:1:exon
so has part: feature:113194-113327:1:exon
so has part: feature:113989-114144:1:exon
so has part: feature:114695-114920:1:exon
so has part: feature:115749-115823:1:exon
so has part: feature:116567-116773:1:exon
so has part: feature:117190-117279:1:exon
so has part: feature:118420-118560:1:exon
so has part: feature:119766-119888:1:exon
so has part: feature:120534-120608:1:exon
so has part: feature:122992-123097:1:exon
so has part: feature:123776-123928:1:exon
so has part: feature:124541-124676:1:exon
so has part: feature:125684-125731:1:exon
so has part: feature:126425-126575:1:exon
so has part: feature:127206-127416:1:exon
so has part: feature:128518-128765:1:exon
so has part: feature:129402-129593:1:exon
so has part: feature:129752-129878:1:exon
so has part: feature:130808-130950:1:exon
so has part: feature:131516-131646:1:exon
so has part: feature:131894-132069:1:exon
so has part: feature:132205-132328:1:exon
so has part: feature:133162-133397:1:exon
so has part: feature:134134-134242:1:exon
so has part: feature:134894-135054:1:exon
so has part: feature:135561-135669:1:exon
so has part: feature:136353-136532:1:exon
so has part: feature:136796-136912:1:exon
so has part: feature:137248-137397:1:exon
so has part: feature:138332-138481:1:exon
so has part: feature:139306-139402:1:exon
so has part: feature:141077-141225:1:exon
so has part: feature:143717-143851:1:exon
so has part: feature:144186-144353:1:exon
so has part: feature:157647-157779:1:exon
so has part: feature:159660-159855:1:exon
so has part: feature:176750-176881:1:exon
so has part: feature:180634-180874:1:exon
so has part: feature:181652-181783:1:exon

XP_030364008.1
type: Protein
SIO_000068: ncbiprotein

position:91625:1
position: 91625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91625-91643:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92073-92203:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92966-93038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:93553-93717:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94894-95024:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95831-95963:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:97472-99694:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:100056-100201:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:100952-101986:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:102877-102967:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:103524-103650:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:104582-104762:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:105610-105792:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:106189-106266:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:108284-108506:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:108951-109161:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:109295-109466:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:109897-110009:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:110563-110772:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:112765-113030:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:113194-113327:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:113989-114144:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:114695-114920:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:115749-115823:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:116567-116773:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:117190-117279:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:118420-118560:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:119766-119888:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:120534-120608:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:122992-123097:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:123776-123928:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:124541-124676:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:125684-125731:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:126425-126575:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:127206-127416:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:128518-128765:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:129402-129593:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:129752-129878:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:130808-130950:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:131516-131646:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:131894-132069:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:132205-132328:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:133162-133397:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:134134-134242:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:134894-135054:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:135561-135669:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:136353-136532:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:136796-136912:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:137248-137397:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:138332-138481:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:139306-139402:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:141077-141225:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:143717-143851:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:144186-144353:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:157647-157779:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:159660-159855:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:176750-176881:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:180634-180874:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:181652-181783:1:exon

DHRS3
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: DHRS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(202872..247981)
location: region:202872-247981:-1
so has part: feature:202872-247981:-1:exon
subclass of: SO_0000010

115617558
type: Gene
SIO_000068: ncbigene

position:202872:-1
position: 202872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247981:-1
position: 247981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202872-247981:-1:exon

DHRS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: DHRS3
product: dehydrogenase/reductase 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 214 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030508241.1
SIO_010081: DHRS3
subclass of: SO_0000673
so part of: DHRS3
location: complement(join(202872..209215,210392..210517,211558..211796,212331..212450,212736..212879,215956..216010))
location: region:202872-216010:-1
so has part: feature:215956-216010:-1:exon
so has part: feature:212736-212879:-1:exon
so has part: feature:212331-212450:-1:exon
so has part: feature:211558-211796:-1:exon
so has part: feature:210392-210517:-1:exon
so has part: feature:202872-209215:-1:exon

position:216010:-1
position: 216010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215956-216010:-1:exon

position:215956:-1
position: 215956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:212736-212879:-1:exon

position:212736:-1
position: 212736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212879:-1
position: 212879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:212331-212450:-1:exon

position:212331:-1
position: 212331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212450:-1
position: 212450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:211558-211796:-1:exon

position:211558:-1
position: 211558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211796:-1
position: 211796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:210392-210517:-1:exon

position:210392:-1
position: 210392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210517:-1
position: 210517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:202872-209215:-1:exon

position:209215:-1
position: 209215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DHRS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: DHRS3
product: dehydrogenase/reductase 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 173 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032920339.1
SIO_010081: DHRS3
subclass of: SO_0000673
so part of: DHRS3
location: complement(join(206685..209215,210392..210517,211558..211796,212331..212450,212736..212879,245889..245959,247800..247981))
location: region:206685-247981:-1
so has part: feature:247800-247981:-1:exon
so has part: feature:245889-245959:-1:exon
so has part: feature:212736-212879:-1:exon
so has part: feature:212331-212450:-1:exon
so has part: feature:211558-211796:-1:exon
so has part: feature:210392-210517:-1:exon
so has part: feature:206685-209215:-1:exon

position:206685:-1
position: 206685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247800-247981:-1:exon

position:247800:-1
position: 247800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:245889-245959:-1:exon

position:245889:-1
position: 245889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245959:-1
position: 245959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:212736-212879:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:212331-212450:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211558-211796:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:210392-210517:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:206685-209215:-1:exon

DHRS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: DHRS3
product: dehydrogenase/reductase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 3 ESTs, 177 long SRA reads, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032920338.1
SIO_010081: DHRS3
subclass of: SO_0000673
so part of: DHRS3
location: complement(join(206685..209215,210392..210517,211558..211796,212331..212450,212736..212879,234167..234502))
location: region:206685-234502:-1
so has part: feature:234167-234502:-1:exon
so has part: feature:212736-212879:-1:exon
so has part: feature:212331-212450:-1:exon
so has part: feature:211558-211796:-1:exon
so has part: feature:210392-210517:-1:exon
so has part: feature:206685-209215:-1:exon

position:234502:-1
position: 234502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234167-234502:-1:exon

position:234167:-1
position: 234167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:212736-212879:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:212331-212450:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:211558-211796:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:210392-210517:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206685-209215:-1:exon

DHRS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: DHRS3
product: dehydrogenase/reductase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 3 ESTs, 121 long SRA reads, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030508240.1
SIO_010081: DHRS3
subclass of: SO_0000673
so part of: DHRS3
location: complement(join(208359..209215,210392..210517,211558..211796,212331..212450,212736..212879,234167..234406,236695..236914))
location: region:208359-236914:-1
so has part: feature:236695-236914:-1:exon
so has part: feature:234167-234406:-1:exon
so has part: feature:212736-212879:-1:exon
so has part: feature:212331-212450:-1:exon
so has part: feature:211558-211796:-1:exon
so has part: feature:210392-210517:-1:exon
so has part: feature:208359-209215:-1:exon

position:208359:-1
position: 208359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236914:-1
position: 236914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236695-236914:-1:exon

position:236695:-1
position: 236695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:234167-234406:-1:exon

position:234406:-1
position: 234406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:212736-212879:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:212331-212450:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211558-211796:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:210392-210517:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:208359-209215:-1:exon

DHRS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: DHRS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short-chain dehydrogenase/reductase 3 isoform X1
translation: MIWKWLGALLLFPLQMVYLVVKAAVCMVLPAKLRDLSAENVLVTGGGRGIGRHLAREFAKRGARKIILWGRTEKCLKETTEEIRMMGTECHYFVCDVGNREEVYRQAKAVREKVGDITILVNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQKGHIVCLNSVLALSAIPGAIDYCTSKASSFAFMESLTLGLLDCPGVNATTVLPFHTSTEMFQGMRIRFPNLFPPLKPETVARRTVEAVQMNQAFLLLPWTMHVLVILKSILPQAALEEIHKFSGSYTCMNTFKGRT
SIO_010081: DHRS3
subclass of: SO_0000673
so part of: DHRS3
location: complement(join(209131..209215,210392..210517,211558..211796,212331..212450,212736..212879,234167..234361))
location: region:209131-234361:-1
so has part: feature:234167-234361:-1:exon
so has part: feature:212736-212879:-1:exon
so has part: feature:212331-212450:-1:exon
so has part: feature:211558-211796:-1:exon
so has part: feature:210392-210517:-1:exon
so has part: feature:209131-209215:-1:exon

XP_030364100.1
type: Protein
SIO_000068: ncbiprotein

position:209131:-1
position: 209131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234361:-1
position: 234361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234167-234361:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212736-212879:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:212331-212450:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:211558-211796:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:210392-210517:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:209131-209215:-1:exon

DHRS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: DHRS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short-chain dehydrogenase/reductase 3 isoform X1
translation: MIWKWLGALLLFPLQMVYLVVKAAVCMVLPAKLRDLSAENVLVTGGGRGIGRHLAREFAKRGARKIILWGRTEKCLKETTEEIRMMGTECHYFVCDVGNREEVYRQAKAVREKVGDITILVNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQKGHIVCLNSVLALSAIPGAIDYCTSKASSFAFMESLTLGLLDCPGVNATTVLPFHTSTEMFQGMRIRFPNLFPPLKPETVARRTVEAVQMNQAFLLLPWTMHVLVILKSILPQAALEEIHKFSGSYTCMNTFKGRT
SIO_010081: DHRS3
subclass of: SO_0000673
so part of: DHRS3
location: complement(join(209131..209215,210392..210517,211558..211796,212331..212450,212736..212879,234167..234361))
location: region:209131-234361:-1
so has part: feature:234167-234361:-1:exon
so has part: feature:212736-212879:-1:exon
so has part: feature:212331-212450:-1:exon
so has part: feature:211558-211796:-1:exon
so has part: feature:210392-210517:-1:exon
so has part: feature:209131-209215:-1:exon

XP_032776229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:234167-234361:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212736-212879:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:212331-212450:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:211558-211796:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:210392-210517:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:209131-209215:-1:exon

DHRS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: DHRS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short-chain dehydrogenase/reductase 3 isoform X2
translation: MMGTECHYFVCDVGNREEVYRQAKAVREKVGDITILVNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQKGHIVCLNSVLALSAIPGAIDYCTSKASSFAFMESLTLGLLDCPGVNATTVLPFHTSTEMFQGMRIRFPNLFPPLKPETVARRTVEAVQMNQAFLLLPWTMHVLVILKSILPQAALEEIHKFSGSYTCMNTFKGRT
SIO_010081: DHRS3
subclass of: SO_0000673
so part of: DHRS3
location: complement(join(209131..209215,210392..210517,211558..211796,212331..212450,212736..212822))
location: region:209131-212822:-1
so has part: feature:212736-212822:-1:exon
so has part: feature:212331-212450:-1:exon
so has part: feature:211558-211796:-1:exon
so has part: feature:210392-210517:-1:exon
so has part: feature:209131-209215:-1:exon

XP_030364101.1
type: Protein
SIO_000068: ncbiprotein

position:212822:-1
position: 212822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212736-212822:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212331-212450:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:211558-211796:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210392-210517:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209131-209215:-1:exon

DHRS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: DHRS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short-chain dehydrogenase/reductase 3 isoform X2
translation: MMGTECHYFVCDVGNREEVYRQAKAVREKVGDITILVNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQKGHIVCLNSVLALSAIPGAIDYCTSKASSFAFMESLTLGLLDCPGVNATTVLPFHTSTEMFQGMRIRFPNLFPPLKPETVARRTVEAVQMNQAFLLLPWTMHVLVILKSILPQAALEEIHKFSGSYTCMNTFKGRT
SIO_010081: DHRS3
subclass of: SO_0000673
so part of: DHRS3
location: complement(join(209131..209215,210392..210517,211558..211796,212331..212450,212736..212822))
location: region:209131-212822:-1
so has part: feature:212736-212822:-1:exon
so has part: feature:212331-212450:-1:exon
so has part: feature:211558-211796:-1:exon
so has part: feature:210392-210517:-1:exon
so has part: feature:209131-209215:-1:exon

XP_032776230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212736-212822:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212331-212450:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:211558-211796:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210392-210517:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209131-209215:-1:exon

LOC115617563
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115617563
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 243399..251404
location: region:243399-251404:1
so has part: feature:243399-251404:1:exon
subclass of: SO_0000010

115617563
type: Gene
SIO_000068: ncbigene

position:243399:1
position: 243399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251404:1
position: 251404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243399-251404:1:exon

LOC115617563
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115617563
product: arylacetamide deacetylase-like 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030508253.1
SIO_010081: LOC115617563
subclass of: SO_0000673
so part of: LOC115617563
location: join(243399..243569,247757..247973,249185..249248,250563..251404)
location: region:243399-251404:1
so has part: feature:243399-243569:1:exon
so has part: feature:247757-247973:1:exon
so has part: feature:249185-249248:1:exon
so has part: feature:250563-251404:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:243399-243569:1:exon

position:243569:1
position: 243569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:247757-247973:1:exon

position:247757:1
position: 247757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247973:1
position: 247973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:249185-249248:1:exon

position:249185:1
position: 249185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249248:1
position: 249248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:250563-251404:1:exon

position:250563:1
position: 250563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115617563
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115617563
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylacetamide deacetylase-like 4
translation: MESFYALALIAGILVAFLLLVLIATYHNSFKVEIPPDADQTLKLRFYHYTYILMEILAKNLESLGVFKEHILIRLLVDGLPACRDSKCFIKDLHFDEVPVRIYCPRVPAANKRRGVLIFHGGCGMFGSIRSHERISRYIARKTDSVVVSVGYVLSPEHEYPAQTLDCLTATMHFLKTAENYGVDPHRIIVCGDSAGGTFAASVCQELGNRRDIPKIRAQVLIYPFLQALNFNLPSHQKNAFSAFLSREHTVKFILKYLKKDCSMKEAVLAGSHIPESMNLRYKKWINPDLIPEIFKLGYKPPLPSSFLPQVHEETKELVETRLSPLLAEDAVVCCLPDTCIITCEHDVLRDDGLLYKKRLEDNNVKVTWFNVEGGFHCALGFFGYGIFSFPSSSKIVNHTVNFIKGY
SIO_010081: LOC115617563
subclass of: SO_0000673
so part of: LOC115617563
location: join(243399..243569,247757..247973,249185..249248,250563..251334)
location: region:243399-251334:1
so has part: feature:243399-243569:1:exon
so has part: feature:247757-247973:1:exon
so has part: feature:249185-249248:1:exon
so has part: feature:250563-251334:1:exon

XP_030364113.1
type: Protein
SIO_000068: ncbiprotein

position:251334:1
position: 251334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243399-243569:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247757-247973:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249185-249248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:250563-251334:1:exon

LOC115617557
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115617557
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 256843..262144
location: region:256843-262144:1
so has part: feature:256843-262144:1:exon
subclass of: SO_0000010

115617557
type: Gene
SIO_000068: ncbigene

position:256843:1
position: 256843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262144:1
position: 262144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256843-262144:1:exon

LOC115617557
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115617557
product: arylacetamide deacetylase-like 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030508236.1
SIO_010081: LOC115617557
subclass of: SO_0000673
so part of: LOC115617557
location: join(256843..256998,259479..259695,260479..260542,261358..262144)
location: region:256843-262144:1
so has part: feature:256843-256998:1:exon
so has part: feature:259479-259695:1:exon
so has part: feature:260479-260542:1:exon
so has part: feature:261358-262144:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:256843-256998:1:exon

position:256998:1
position: 256998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:259479-259695:1:exon

position:259479:1
position: 259479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259695:1
position: 259695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:260479-260542:1:exon

position:260479:1
position: 260479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260542:1
position: 260542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:261358-262144:1:exon

position:261358:1
position: 261358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115617557
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115617557
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylacetamide deacetylase-like 4
translation: MGLLLVIFLAVLTFFVAMAFYYEHPKAKIPHGFSQRRKLYIFHHAMNFGFGLAKVLEKVGITSEMYFLRAVMDGIPPLKDEHLFIRDLKFEKVEVRIYQPKTSTTGQRRGILYFHGGVGLFGSIRAYERTCRYFAGQSNSVVVSVGYRLAPEHPYPIQFEDCLAATIHFMRTAQDYGVDPARIIICGDSSGGTITAAVAQALVNRRDLPKLRAQILIYPFLQALDFDLPSYQQNEGVPILLKERILSLGLRYLNKELPVTKTAFKVFKGYHVPEDLLQKYRKWVSSDIIPPEFKRRGYKPRTTYSFSEEIYALVKPVFDTVFSPLLAEDSVIAQLPEAFILTCEYDVLRDDGLLYKKRLEDHGIKVTWCHLQEGFHGTVFLALCGALLSFQSGNKGLENIVHFLRLM
SIO_010081: LOC115617557
subclass of: SO_0000673
so part of: LOC115617557
location: join(256843..256998,259479..259695,260479..260542,261358..262144)
location: region:256843-262144:1
so has part: feature:256843-256998:1:exon
so has part: feature:259479-259695:1:exon
so has part: feature:260479-260542:1:exon
so has part: feature:261358-262144:1:exon

XP_030364096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256843-256998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:259479-259695:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260479-260542:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:261358-262144:1:exon

LOC115617461
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115617461
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 270135..275381
location: region:270135-275381:1
so has part: feature:270135-275381:1:exon
subclass of: SO_0000010

115617461
type: Gene
SIO_000068: ncbigene

position:270135:1
position: 270135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275381:1
position: 275381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270135-275381:1:exon

LOC115617461
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115617461
product: arylacetamide deacetylase-like 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
transcript id: XM_030507975.1
SIO_010081: LOC115617461
subclass of: SO_0000673
so part of: LOC115617461
location: join(270135..270281,270646..270862,274266..274329,274607..275381)
location: region:270135-275381:1
so has part: feature:270135-270281:1:exon
so has part: feature:270646-270862:1:exon
so has part: feature:274266-274329:1:exon
so has part: feature:274607-275381:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:270135-270281:1:exon

position:270281:1
position: 270281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:270646-270862:1:exon

position:270646:1
position: 270646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270862:1
position: 270862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:274266-274329:1:exon

position:274266:1
position: 274266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274329:1
position: 274329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:274607-275381:1:exon

position:274607:1
position: 274607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115617461
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115617461
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylacetamide deacetylase-like 4
translation: MVFISPVVIPAVFFWGVFYDLFNSELPLGIDQPLKLRFYHSVMITTMVLGKILQKLGICSDLSLLRIVLDGIPPCRDSRLLIKDLKVDEVPLRIYQPKWPPTGKRRGILYFHGGAGTFGSIRAFERICRYMAKKCNSVVVSVGYRLAPEHPYPGQYFDCLNATLYFMRNLEEYHVDPALIILSGDSCGANFATVICQILLNKRDLPKVRAQVLLYPGLQGLDFQLPSYQQNASVPVLFRKLVVYFCFRYLNKEPSVLEDVIQNRHVPESMKQKYKKWVSADIIPDKFKMRDYVPQKPTSYKPEVHEAIKEILAITFSPLLAEDSIIRQLPECYILTCEFDVLRDDGLLYKKRLEDNGVQVTWYHSESGFHGILSFFGYGIFSFLTGKKIMDSTVNFINSL
SIO_010081: LOC115617461
subclass of: SO_0000673
so part of: LOC115617461
location: join(270135..270281,270646..270862,274266..274329,274607..275381)
location: region:270135-275381:1
so has part: feature:270135-270281:1:exon
so has part: feature:270646-270862:1:exon
so has part: feature:274266-274329:1:exon
so has part: feature:274607-275381:1:exon

XP_030363835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270135-270281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:270646-270862:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274266-274329:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274607-275381:1:exon

LOC115617556
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115617556
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 277549..282112
location: region:277549-282112:1
so has part: feature:277549-282112:1:exon
subclass of: SO_0000010

115617556
type: Gene
SIO_000068: ncbigene

position:277549:1
position: 277549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282112:1
position: 282112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277549-282112:1:exon

LOC115617556
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115617556
product: arylacetamide deacetylase-like 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 60% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030508235.1
SIO_010081: LOC115617556
subclass of: SO_0000673
so part of: LOC115617556
location: join(277549..277725,279872..280088,280498..280561,281338..282112)
location: region:277549-282112:1
so has part: feature:277549-277725:1:exon
so has part: feature:279872-280088:1:exon
so has part: feature:280498-280561:1:exon
so has part: feature:281338-282112:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:277549-277725:1:exon

position:277725:1
position: 277725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:279872-280088:1:exon

position:279872:1
position: 279872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280088:1
position: 280088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:280498-280561:1:exon

position:280498:1
position: 280498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280561:1
position: 280561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:281338-282112:1:exon

position:281338:1
position: 281338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115617556
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115617556
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylacetamide deacetylase-like 4
translation: MAVVYTLLVLFLAVFVAGFVLLVLGAMNFDFSNSEIPPGVNEPVKLRIIHIMLICRAVVGRILENIGICSQVNFVRYMQDRKTLREDPKLFIKDLWFEKVPVRIYQPKAPSAHQRRGVMFFHGGGWVFGSLETHERLCRSIAKESESVVVSVGYRLAPEHKYPAAYEDCLTATIHFMKNAEHYGVDPANITVCGDSAGGNLAAAVSQTLAGRSDLPSLRAQVLIYPGLQALDFNLPSYHQNRGVPPLFRERAAFYMLQYLDGNASNLEEVLEGSHIPMDIKLNYGKWVSPDHIPEKFKVRGYKPHVLLDCSTEIYETVKRFCEPNLCPLLAEDAVIQQLPECFILTCEYDVLRDDGLLYKKRLEDNGVPVTWYHLEDGFHGIINSFNTDWLSFPSGKRGLDNIVNFLNSL
SIO_010081: LOC115617556
subclass of: SO_0000673
so part of: LOC115617556
location: join(277549..277725,279872..280088,280498..280561,281338..282112)
location: region:277549-282112:1
so has part: feature:277549-277725:1:exon
so has part: feature:279872-280088:1:exon
so has part: feature:280498-280561:1:exon
so has part: feature:281338-282112:1:exon

XP_030364095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277549-277725:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:279872-280088:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:280498-280561:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:281338-282112:1:exon

LOC115617462
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115617462
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 284843..286838
location: region:284843-286838:1
so has part: feature:284843-286838:1:exon
subclass of: SO_0000010

115617462
type: Gene
SIO_000068: ncbigene

position:284843:1
position: 284843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286838:1
position: 286838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284843-286838:1:exon

LOC115617462
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115617462
product: arylacetamide deacetylase-like 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030507976.1
SIO_010081: LOC115617462
subclass of: SO_0000673
so part of: LOC115617462
location: join(284843..284952,285797..286838)
location: region:284843-286838:1
so has part: feature:284843-284952:1:exon
so has part: feature:285797-286838:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:284843-284952:1:exon

position:284952:1
position: 284952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:285797-286838:1:exon

position:285797:1
position: 285797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115617462
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115617462
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylacetamide deacetylase-like 4
translation: MWKRSGHITIPKRFADSHEKICRYIARESNSVVVSVGYRLAPEHKYPAAYEDCLTATIHFMKNAEHYGVNPANITVCGDSAGGNLAAAVSQTLAGRSDLPSLRAQVLIYPGLQALDFNLPSYYQNQGVPPLLREHAIFCMLHYLDGHALHMQEVLEGSHIPPDMRLKYRKWVSPDHIPEKFKVRGYKPHKPHEFKADFFEKAKRFCEPNLCPLLAEDAVIQQLPECFILTCEYDVLRDDGLLYKKRLEDNGVPVTWYHLEDGFHGITSLYDYCGLSFPSGKRGLDRIVKYIKGL
SIO_010081: LOC115617462
subclass of: SO_0000673
so part of: LOC115617462
location: join(284843..284952,285797..286571)
location: region:284843-286571:1
so has part: feature:284843-284952:1:exon
so has part: feature:285797-286571:1:exon

XP_030363836.1
type: Protein
SIO_000068: ncbiprotein

position:286571:1
position: 286571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284843-284952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:285797-286571:1:exon

LOC115617555
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115617555
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 287861..292357
location: region:287861-292357:1
so has part: feature:287861-292357:1:exon
subclass of: SO_0000010

115617555
type: Gene
SIO_000068: ncbigene

position:287861:1
position: 287861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292357:1
position: 292357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287861-292357:1:exon

LOC115617555
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115617555
product: arylacetamide deacetylase-like 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 29 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030508234.1
SIO_010081: LOC115617555
subclass of: SO_0000673
so part of: LOC115617555
location: join(287861..288324,290146..290362,290564..290627,291308..292357)
location: region:287861-292357:1
so has part: feature:287861-288324:1:exon
so has part: feature:290146-290362:1:exon
so has part: feature:290564-290627:1:exon
so has part: feature:291308-292357:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:287861-288324:1:exon

position:288324:1
position: 288324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:290146-290362:1:exon

position:290146:1
position: 290146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290362:1
position: 290362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:290564-290627:1:exon

position:290564:1
position: 290564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290627:1
position: 290627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:291308-292357:1:exon

position:291308:1
position: 291308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115617555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115617555
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylacetamide deacetylase-like 4
translation: MALLPALLLLLLLGLAALAAVLAVVLLSLPSYDIPPGVNQPAKLRLVLAVLLGTAALGRILEKTGLCNQITFGRYVRQGRKLGVDPKLFIQDLQFNKVPVRVYQPKATSDGRRRALIFFHGGGWVFGSLDTYEKVCRYISRESRSVVVSVQYRLAPEHKYPAAYEDCLTATIHFMKNAEHYGVDPANITVCGDSAGGNLAAAVSQTLAGRSDLPSLRAQVLIYPGLQALDFNLPSYHQNRGVPLLFRERAAFFALQYLNGHALHMQEVLEGSHIPPDMRLKYRKWVSPDHIPEKFKVRGVKPRKSTDFIAEVYETVKRFCEPNLCPLLAEDAVIQQLPECFILTCEYDVLRDDGLLYKKRLEDNGVPVTWYHLEDGFHGIISLYDYCGLSFPSGKRGLDSVVNFLKSL
SIO_010081: LOC115617555
subclass of: SO_0000673
so part of: LOC115617555
location: join(288154..288324,290146..290362,290564..290627,291308..292082)
location: region:288154-292082:1
so has part: feature:288154-288324:1:exon
so has part: feature:290146-290362:1:exon
so has part: feature:290564-290627:1:exon
so has part: feature:291308-292082:1:exon

XP_030364094.1
type: Protein
SIO_000068: ncbiprotein

position:288154:1
position: 288154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292082:1
position: 292082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288154-288324:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:290146-290362:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290564-290627:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:291308-292082:1:exon

LRRC38
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LRRC38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(289546..333189)
location: region:289546-333189:-1
so has part: feature:289546-333189:-1:exon
subclass of: SO_0000010

115617560
type: Gene
SIO_000068: ncbigene

position:289546:-1
position: 289546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333189:-1
position: 333189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289546-333189:-1:exon

LRRC38
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2489341
gene: LRRC38
product: leucine rich repeat containing 38, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004390002.1
SIO_010081: LRRC38
so part of: LRRC38
location: complement(join(289546..290416,316981..317134,318468..318716,320983..321273,332385..333189))
location: region:289546-333189:-1
so has part: feature:332385-333189:-1:exon
so has part: feature:320983-321273:-1:exon
so has part: feature:318468-318716:-1:exon
so has part: feature:316981-317134:-1:exon
so has part: feature:289546-290416:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:332385-333189:-1:exon

position:332385:-1
position: 332385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:320983-321273:-1:exon

position:320983:-1
position: 320983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321273:-1
position: 321273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:318468-318716:-1:exon

position:318468:-1
position: 318468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318716:-1
position: 318716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:316981-317134:-1:exon

position:316981:-1
position: 316981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317134:-1
position: 317134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:289546-290416:-1:exon

position:290416:-1
position: 290416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C16H1orf158
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: C16H1orf158
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 293248..295917
location: region:293248-295917:1
so has part: feature:293248-295917:1:exon
subclass of: SO_0000010

115617561
type: Gene
SIO_000068: ncbigene

position:293248:1
position: 293248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295917:1
position: 295917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293248-295917:1:exon

C16H1orf158
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: C16H1orf158
product: chromosome 16 C1orf158 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030508245.1
SIO_010081: C16H1orf158
subclass of: SO_0000673
so part of: C16H1orf158
location: join(293248..293849,294650..294827,295445..295917)
location: region:293248-295917:1
so has part: feature:293248-293849:1:exon
so has part: feature:294650-294827:1:exon
so has part: feature:295445-295917:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:293248-293849:1:exon

position:293849:1
position: 293849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:294650-294827:1:exon

position:294650:1
position: 294650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294827:1
position: 294827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:295445-295917:1:exon

position:295445:1
position: 295445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C16H1orf158
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: C16H1orf158
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C1orf158 homolog
translation: MVEKLEGLPRQHFFTHHEEPRSRNLVSEYDDKYNRHGYNPVLPPLRKWSGSKSSWIPQKSDFPITEPPTNYGLLEHLMKKWHKKEAGVMNSVYTISYETPSIPAFATHHLRQPPKTPGLPFIQGSLPQNVSGILDYERLRNICKSSADW
SIO_010081: C16H1orf158
subclass of: SO_0000673
so part of: C16H1orf158
location: join(293832..293849,294650..294827,295445..295698)
location: region:293832-295698:1
so has part: feature:293832-293849:1:exon
so has part: feature:294650-294827:1:exon
so has part: feature:295445-295698:1:exon

XP_030364105.1
type: Protein
SIO_000068: ncbiprotein

position:293832:1
position: 293832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295698:1
position: 295698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293832-293849:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:294650-294827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:295445-295698:1:exon

LRRC38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LRRC38
product: leucine rich repeat containing 38, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 46 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030508243.1
SIO_010081: LRRC38
subclass of: SO_0000673
so part of: LRRC38
location: complement(join(319169..321273,332385..333189))
location: region:319169-333189:-1
so has part: feature:332385-333189:-1:exon
so has part: feature:319169-321273:-1:exon

position:319169:-1
position: 319169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332385-333189:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:319169-321273:-1:exon

LRRC38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LRRC38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 38
translation: MLPCFPSCLLPSSLFVCLLFLPVGHFCPAVCSCMDYHTIDCRDQGLPSVPSSFPLDVRKLLIADNNIQVIPADFFIFYGDLVYLDFRNNSLTSLEEGTFSRSTKLLYLDLSYNNLTQLDAGIFKSAEKLVKLSLGNNNLVDVDEAAFENLEQLQVLELNDNNLQSLNVAILEALPSLRTIRLEGNPWVCDCDFASLFSWIQDNASKLQKGLHEIQCSLPIENRRIFLNELSEVSFSECKFSLSLTDLFFIIFSGVAVSIAAILSSFFLATLVHCFQRCAPSKDDDDDEDDGEDGVGACIQDC
SIO_010081: LRRC38
subclass of: SO_0000673
so part of: LRRC38
location: complement(join(320993..321273,332385..333012))
location: region:320993-333012:-1
so has part: feature:332385-333012:-1:exon
so has part: feature:320993-321273:-1:exon

XP_030364103.1
type: Protein
SIO_000068: ncbiprotein

position:320993:-1
position: 320993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333012:-1
position: 333012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332385-333012:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:320993-321273:-1:exon

PDPN
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: PDPN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 349907..365361
location: region:349907-365361:1
so has part: feature:349907-365361:1:exon
subclass of: SO_0000010

115617562
type: Gene
SIO_000068: ncbigene

position:349907:1
position: 349907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365361:1
position: 365361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349907-365361:1:exon

PDPN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: PDPN
product: podoplanin, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 102 long SRA reads, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030508250.2
SIO_010081: PDPN
subclass of: SO_0000673
so part of: PDPN
location: join(349907..350222,360721..360800,361379..361511,363152..363187,363564..363669,364246..365361)
location: region:349907-365361:1
so has part: feature:349907-350222:1:exon
so has part: feature:360721-360800:1:exon
so has part: feature:361379-361511:1:exon
so has part: feature:363152-363187:1:exon
so has part: feature:363564-363669:1:exon
so has part: feature:364246-365361:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:349907-350222:1:exon

position:350222:1
position: 350222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:360721-360800:1:exon

position:360721:1
position: 360721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360800:1
position: 360800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:361379-361511:1:exon

position:361379:1
position: 361379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361511:1
position: 361511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:363152-363187:1:exon

position:363152:1
position: 363152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363187:1
position: 363187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:363564-363669:1:exon

position:363564:1
position: 363564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363669:1
position: 363669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:364246-365361:1:exon

position:364246:1
position: 364246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PDPN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: PDPN
product: podoplanin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 94 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030508249.1
SIO_010081: PDPN
subclass of: SO_0000673
so part of: PDPN
location: join(349942..350222,360721..360800,361379..361511,363152..363187,363564..365361)
location: region:349942-365361:1
so has part: feature:349942-350222:1:exon
so has part: feature:360721-360800:1:exon
so has part: feature:361379-361511:1:exon
so has part: feature:363152-363187:1:exon
so has part: feature:363564-365361:1:exon

position:349942:1
position: 349942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349942-350222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360721-360800:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:361379-361511:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:363152-363187:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:363564-365361:1:exon

PDPN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: PDPN
product: podoplanin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030508246.1
SIO_010081: PDPN
subclass of: SO_0000673
so part of: PDPN
location: join(349942..350222,360721..360800,361379..361511,363152..363187,363564..363675,364246..365361)
location: region:349942-365361:1
so has part: feature:349942-350222:1:exon
so has part: feature:360721-360800:1:exon
so has part: feature:361379-361511:1:exon
so has part: feature:363152-363187:1:exon
so has part: feature:363564-363675:1:exon
so has part: feature:364246-365361:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:349942-350222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360721-360800:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:361379-361511:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:363152-363187:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:363564-363675:1:exon

position:363675:1
position: 363675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:364246-365361:1:exon

PDPN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: PDPN
product: podoplanin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 88 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030508247.2
SIO_010081: PDPN
subclass of: SO_0000673
so part of: PDPN
location: join(349942..350222,360721..360800,361379..361511,363152..363187,363564..363665,364246..365361)
location: region:349942-365361:1
so has part: feature:349942-350222:1:exon
so has part: feature:360721-360800:1:exon
so has part: feature:361379-361511:1:exon
so has part: feature:363152-363187:1:exon
so has part: feature:363564-363665:1:exon
so has part: feature:364246-365361:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:349942-350222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360721-360800:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:361379-361511:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:363152-363187:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:363564-363665:1:exon

position:363665:1
position: 363665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:364246-365361:1:exon

PDPN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: PDPN
product: podoplanin, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 94 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030508252.1
SIO_010081: PDPN
subclass of: SO_0000673
so part of: PDPN
location: join(349942..350222,360721..360800,361418..361511,363152..363187,363564..365361)
location: region:349942-365361:1
so has part: feature:349942-350222:1:exon
so has part: feature:360721-360800:1:exon
so has part: feature:361418-361511:1:exon
so has part: feature:363152-363187:1:exon
so has part: feature:363564-365361:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:349942-350222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360721-360800:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:361418-361511:1:exon

position:361418:1
position: 361418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:363152-363187:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:363564-365361:1:exon

PDPN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: PDPN
product: podoplanin, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030508251.1
SIO_010081: PDPN
subclass of: SO_0000673
so part of: PDPN
location: join(349942..350222,360721..360800,361418..361511,363152..363187,363564..363675,364246..365361)
location: region:349942-365361:1
so has part: feature:349942-350222:1:exon
so has part: feature:360721-360800:1:exon
so has part: feature:361418-361511:1:exon
so has part: feature:363152-363187:1:exon
so has part: feature:363564-363675:1:exon
so has part: feature:364246-365361:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:349942-350222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360721-360800:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:361418-361511:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:363152-363187:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:363564-363675:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:364246-365361:1:exon

PDPN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: PDPN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: podoplanin isoform X2
translation: MFIMIKVQFFIFVLGSVPFIALAEEASSVLEGEESTTTDFRNDTELEELPTLLPTRLQSVTNLLQFGQLMTTESAFAPAEDSDNSTGYKVNTENADGRLSGEPEKTEKGGLETIALVGIIIGVIVAVGILAGIIIAVVRKMSGPENS
SIO_010081: PDPN
subclass of: SO_0000673
so part of: PDPN
location: join(350147..350222,360721..360800,361379..361511,363152..363187,363564..363665,364246..364262)
location: region:350147-364262:1
so has part: feature:350147-350222:1:exon
so has part: feature:360721-360800:1:exon
so has part: feature:361379-361511:1:exon
so has part: feature:363152-363187:1:exon
so has part: feature:363564-363665:1:exon
so has part: feature:364246-364262:1:exon

XP_030364107.1
type: Protein
SIO_000068: ncbiprotein

position:350147:1
position: 350147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364262:1
position: 364262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350147-350222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360721-360800:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:361379-361511:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:363152-363187:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:363564-363665:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:364246-364262:1:exon

PDPN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: PDPN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: podoplanin isoform X1
translation: MFIMIKVQFFIFVLGSVPFIALAEEASSVLEGEESTTTDFRNDTELEELPTLLPTRLQSVTNLLQFGQLMTTESAFAPAEDSDNSTGYKVNTENADGRLSGEPEKTEKGGLETIALVGIIIGVIVAVGILAGIIIAVVRKMSGRYSP
SIO_010081: PDPN
subclass of: SO_0000673
so part of: PDPN
location: join(350147..350222,360721..360800,361379..361511,363152..363187,363564..363675,364246..364252)
location: region:350147-364252:1
so has part: feature:350147-350222:1:exon
so has part: feature:360721-360800:1:exon
so has part: feature:361379-361511:1:exon
so has part: feature:363152-363187:1:exon
so has part: feature:363564-363675:1:exon
so has part: feature:364246-364252:1:exon

XP_030364106.1
type: Protein
SIO_000068: ncbiprotein

position:364252:1
position: 364252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350147-350222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360721-360800:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:361379-361511:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:363152-363187:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:363564-363675:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:364246-364252:1:exon

PDPN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: PDPN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: podoplanin isoform X4
translation: MFIMIKVQFFIFVLGSVPFIALAEEASSVLEGEESTTTDFRNDTELEELPTLLPTRLQSVTNLLQFGQLMTTESAFAPAEDSDNSTGYKVNTENADGRLSGEPEKTEKGGLETIALVGIIIGVIVAVGILAGIIIAVVRKMSGRP
SIO_010081: PDPN
subclass of: SO_0000673
so part of: PDPN
location: join(350147..350222,360721..360800,361379..361511,363152..363187,363564..363669,364246..364252)
location: region:350147-364252:1
so has part: feature:350147-350222:1:exon
so has part: feature:360721-360800:1:exon
so has part: feature:361379-361511:1:exon
so has part: feature:363152-363187:1:exon
so has part: feature:363564-363669:1:exon
so has part: feature:364246-364252:1:exon

XP_030364110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350147-350222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360721-360800:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:361379-361511:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:363152-363187:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:363564-363669:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:364246-364252:1:exon

PDPN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: PDPN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: podoplanin isoform X5
translation: MFIMIKVQFFIFVLGSVPFIALAEEASSVLEGEESTTTDFRNDTELEELPTLFGQLMTTESAFAPAEDSDNSTGYKVNTENADGRLSGEPEKTEKGGLETIALVGIIIGVIVAVGILAGIIIAVVRKMSGRYSP
SIO_010081: PDPN
subclass of: SO_0000673
so part of: PDPN
location: join(350147..350222,360721..360800,361418..361511,363152..363187,363564..363675,364246..364252)
location: region:350147-364252:1
so has part: feature:350147-350222:1:exon
so has part: feature:360721-360800:1:exon
so has part: feature:361418-361511:1:exon
so has part: feature:363152-363187:1:exon
so has part: feature:363564-363675:1:exon
so has part: feature:364246-364252:1:exon

XP_030364111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350147-350222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360721-360800:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:361418-361511:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:363152-363187:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:363564-363675:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:364246-364252:1:exon

PDPN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: PDPN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: podoplanin isoform X3
translation: MFIMIKVQFFIFVLGSVPFIALAEEASSVLEGEESTTTDFRNDTELEELPTLLPTRLQSVTNLLQFGQLMTTESAFAPAEDSDNSTGYKVNTENADGRLSGEPEKTEKGGLETIALVGIIIGVIVAVGILAGIIIAVVRKMSGRYS
SIO_010081: PDPN
subclass of: SO_0000673
so part of: PDPN
location: join(350147..350222,360721..360800,361379..361511,363152..363187,363564..363679)
location: region:350147-363679:1
so has part: feature:350147-350222:1:exon
so has part: feature:360721-360800:1:exon
so has part: feature:361379-361511:1:exon
so has part: feature:363152-363187:1:exon
so has part: feature:363564-363679:1:exon

XP_030364109.1
type: Protein
SIO_000068: ncbiprotein

position:363679:1
position: 363679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350147-350222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360721-360800:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:361379-361511:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:363152-363187:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:363564-363679:1:exon

PDPN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: PDPN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: podoplanin isoform X6
translation: MFIMIKVQFFIFVLGSVPFIALAEEASSVLEGEESTTTDFRNDTELEELPTLFGQLMTTESAFAPAEDSDNSTGYKVNTENADGRLSGEPEKTEKGGLETIALVGIIIGVIVAVGILAGIIIAVVRKMSGRYS
SIO_010081: PDPN
subclass of: SO_0000673
so part of: PDPN
location: join(350147..350222,360721..360800,361418..361511,363152..363187,363564..363679)
location: region:350147-363679:1
so has part: feature:350147-350222:1:exon
so has part: feature:360721-360800:1:exon
so has part: feature:361418-361511:1:exon
so has part: feature:363152-363187:1:exon
so has part: feature:363564-363679:1:exon

XP_030364112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350147-350222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360721-360800:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:361418-361511:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:363152-363187:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:363564-363679:1:exon

PRDM2
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: PRDM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 377451..449461
location: region:377451-449461:1
so has part: feature:377451-449461:1:exon
subclass of: SO_0000010

115617554
type: Gene
SIO_000068: ncbigene

position:377451:1
position: 377451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449461:1
position: 449461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377451-449461:1:exon

PRDM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: PRDM2
product: PR/SET domain 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 113 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030508233.1
SIO_010081: PRDM2
subclass of: SO_0000673
so part of: PRDM2
location: join(377451..377547,385012..385085,393996..394113,395391..395494,399327..399479,405951..406077,423780..423838,427209..427316,427743..432114,445086..445221,446428..449461)
location: region:377451-449461:1
so has part: feature:377451-377547:1:exon
so has part: feature:385012-385085:1:exon
so has part: feature:393996-394113:1:exon
so has part: feature:395391-395494:1:exon
so has part: feature:399327-399479:1:exon
so has part: feature:405951-406077:1:exon
so has part: feature:423780-423838:1:exon
so has part: feature:427209-427316:1:exon
so has part: feature:427743-432114:1:exon
so has part: feature:445086-445221:1:exon
so has part: feature:446428-449461:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:377451-377547:1:exon

position:377547:1
position: 377547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:385012-385085:1:exon

position:385012:1
position: 385012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385085:1
position: 385085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:393996-394113:1:exon

position:393996:1
position: 393996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394113:1
position: 394113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:395391-395494:1:exon

position:395391:1
position: 395391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395494:1
position: 395494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:399327-399479:1:exon

position:399327:1
position: 399327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399479:1
position: 399479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:405951-406077:1:exon

position:405951:1
position: 405951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406077:1
position: 406077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:423780-423838:1:exon

position:423780:1
position: 423780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423838:1
position: 423838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:427209-427316:1:exon

position:427209:1
position: 427209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427316:1
position: 427316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:427743-432114:1:exon

position:427743:1
position: 427743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432114:1
position: 432114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:445086-445221:1:exon

position:445086:1
position: 445086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445221:1
position: 445221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:446428-449461:1:exon

position:446428:1
position: 446428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRDM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: PRDM2
product: PR/SET domain 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 152 long SRA reads, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030508230.1
SIO_010081: PRDM2
subclass of: SO_0000673
so part of: PRDM2
location: join(377451..377547,385012..385085,393996..394113,395391..395494,399327..399479,405951..406077,427209..427316,427743..432114,445086..445221,446428..449461)
location: region:377451-449461:1
so has part: feature:377451-377547:1:exon
so has part: feature:385012-385085:1:exon
so has part: feature:393996-394113:1:exon
so has part: feature:395391-395494:1:exon
so has part: feature:399327-399479:1:exon
so has part: feature:405951-406077:1:exon
so has part: feature:427209-427316:1:exon
so has part: feature:427743-432114:1:exon
so has part: feature:445086-445221:1:exon
so has part: feature:446428-449461:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:377451-377547:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:385012-385085:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:393996-394113:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:395391-395494:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:399327-399479:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:405951-406077:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:427209-427316:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:427743-432114:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:445086-445221:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:446428-449461:1:exon

PRDM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: PRDM2
product: PR/SET domain 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 140 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030508232.1
SIO_010081: PRDM2
subclass of: SO_0000673
so part of: PRDM2
location: join(377451..377547,385012..385085,395391..395494,399327..399479,405951..406077,427209..427316,427743..432114,445086..445221,446428..449461)
location: region:377451-449461:1
so has part: feature:377451-377547:1:exon
so has part: feature:385012-385085:1:exon
so has part: feature:395391-395494:1:exon
so has part: feature:399327-399479:1:exon
so has part: feature:405951-406077:1:exon
so has part: feature:427209-427316:1:exon
so has part: feature:427743-432114:1:exon
so has part: feature:445086-445221:1:exon
so has part: feature:446428-449461:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:377451-377547:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:385012-385085:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395391-395494:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399327-399479:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:405951-406077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:427209-427316:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:427743-432114:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:445086-445221:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446428-449461:1:exon

PRDM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: PRDM2
product: PR/SET domain 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 214 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030508231.1
SIO_010081: PRDM2
subclass of: SO_0000673
so part of: PRDM2
location: join(377451..377547,385012..385085,393996..394113,395391..395494,399327..399479,405951..406077,427209..427316,427743..432114,434032..435620)
location: region:377451-435620:1
so has part: feature:377451-377547:1:exon
so has part: feature:385012-385085:1:exon
so has part: feature:393996-394113:1:exon
so has part: feature:395391-395494:1:exon
so has part: feature:399327-399479:1:exon
so has part: feature:405951-406077:1:exon
so has part: feature:427209-427316:1:exon
so has part: feature:427743-432114:1:exon
so has part: feature:434032-435620:1:exon

position:435620:1
position: 435620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377451-377547:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:385012-385085:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:393996-394113:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:395391-395494:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:399327-399479:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:405951-406077:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:427209-427316:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:427743-432114:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:434032-435620:1:exon

position:434032:1
position: 434032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRDM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: PRDM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 2 isoform X1
translation: MNQNTTEATVTVETLDDVPEHVLRGLPEDVRLFPSAVDKTRLGVWATKSILKGKKFGPFVGDKKKRSQVKSNVYMWEVYYPNLGWMCVDATDPEKGNWLRYINWARSGKEQNLFPLEINRTIYYKSLKPIAPGEELLVWYNGEDDPEIAAAIEEERASARSRRHSPKAKKGKKKTQEGKKGKKAVDTKQKKADLDSTAADMRDSKEGRKEEDEAPSVSAVLSLEQTAVIQEMVNQDVLPKLMIPSPTSEPQMVTEDKQGEAINCASDDFDDEDEEEDEEEEDEEELEDTNMPKENAEMPLVCEEKLDCMEEQKSTSEESPESSPKKKLVVKIPKARGESNGDVPETFMFPCQHCERKFTTKQGLERHMHIHISTVNHAFKCRYCGKAFGTQINRRRHERRHEAGPKRKPFLTLTSSQHLDNVADNQVVVDDGLKEDLNVSSLVQDSVVLDSEKVSQEMSNSAFAEENKEPKELHPCKYCKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGFFTEEPPLQTEQAPPVQSVYIASTEIEEEGEVDDVYIMDISSNISENLNYYIDGKIQSNSSTSNCDVIQMESNSADLYGLNCIISPVTVEISPTLKVTQTHVNEPPKEPSSSGSNESKKRRTASPPLVPKIKTEIDPDPVTPTSSLNLPLSISTESLPFQKEKGVYLSSKLKQLLQTQDSKKITPSGEIPKLGPSVTSSPILPPVSSRFKRRTSSPPSSPQHSPVLRDFVKSGEGKTAWNDNIRSSKMPKLESHSNSPAWSLTGREEKETLSPLCFEDYKISKDWTAAPTFGSVCNQQPLDLSSGVKQRSDTKNKNQVPWESVLDLSVHKKPCSDTEIREYKENSIQPTCSGVKKKKPTTCMLQKVLLNEYNGTDAATDSTLGVNRSVSPSKSLEPQAEPDVDPSLSALSSVDTQPLSSSVSPVPQASAVPSICQLPPLLTPTNPPSPPPCPPMLTVATSPPPLLPTMPLSIPEASASATNTSSCPSPLSNTTTQSPLPVLSPTVSPSPSPVPSVEPLISAASPGPPTLSSSSSSSSSSSFSSSSSSSSPSPPPLSVVSSVVSSADNLENTLPIIKQEEAETEQQKAREDPHTSGESGVVQETFNKSFVCNVCESPFLSIKDLTKHLSIHAEEWPFKCEFCVQLFRDKTDLSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQHQRDLHPDKECTHHEFESGTLRPQNFTDPSKANVEHMQSLSEDSLEPSKEEEDEDLNDSSEELYTTIKIMASGVKSKDPDVRMGLNQHYPSFKPPPFQYHHRNPMGIGVTATNFTTHNIPQTFTTAIRCTKCGKSVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPKNGMVVIAGPGKNAFRRMGQPKRLNFNIEISKMSSNKLKISALKKKNQLVQKAILQKKKAAQQKADLKTHPSESDPHICPYCNREFTYIGSLNKHASFSCPKKPISPSSKKNSSKKGASSSPASSEKGSNQRRRTADAEIKMQSMQPHLGKTRARTSGPAQLQLPSASFRSKQNVKFVPSIRSKKPNSSSSLRNSSPVRVSRMSHVEGKKTKVVAKNSSSGISSKASRKLHVRIQRNNKAVLPSKSAVASKKKADRFMVKARERIGGPITRSLQQAANAEAAENKRDESSAKQELKDFSYRLRMASRCPSSSSHNTSTRQCKKSNCTAPHFLKE
SIO_010081: PRDM2
subclass of: SO_0000673
so part of: PRDM2
location: join(385077..385085,393996..394113,395391..395494,399327..399479,405951..406077,427209..427316,427743..432114,445086..445194)
location: region:385077-445194:1
so has part: feature:385077-385085:1:exon
so has part: feature:393996-394113:1:exon
so has part: feature:395391-395494:1:exon
so has part: feature:399327-399479:1:exon
so has part: feature:405951-406077:1:exon
so has part: feature:427209-427316:1:exon
so has part: feature:427743-432114:1:exon
so has part: feature:445086-445194:1:exon

XP_030364090.1
type: Protein
SIO_000068: ncbiprotein

position:385077:1
position: 385077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445194:1
position: 445194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385077-385085:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:393996-394113:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395391-395494:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399327-399479:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:405951-406077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:427209-427316:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:427743-432114:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:445086-445194:1:exon

PRDM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: PRDM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 2 isoform X2
translation: MNQNTTEATVTVETLDDVPEHVLRGLPEDVRLFPSAVDKTRLGVWATKSILKGKKFGPFVGDKKKRSQVKSNVYMWEVYYPNLGWMCVDATDPEKGNWLRYINWARSGKEQNLFPLEINRTIYYKSLKPIAPGEELLVWYNGEDDPEIAAAIEEERASARSRRHSPKAKKGKKKTQEGKKGKKAVDTKQKKADLDSTAADMRDSKEGRKEEDEAPSVSAVLSLEQTAVIQEMVNQDVLPKLMIPSPTSEPQMVTEDKQGEAINCASDDFDDEDEEEDEEEEDEEELEDTNMPKENAEMPLVCEEKLDCMEEQKSTSEESPESSPKKKLVVKIPKARGESNGDVPETFMFPCQHCERKFTTKQGLERHMHIHISTVNHAFKCRYCGKAFGTQINRRRHERRHEAGPKRKPFLTLTSSQHLDNVADNQVVVDDGLKEDLNVSSLVQDSVVLDSEKVSQEMSNSAFAEENKEPKELHPCKYCKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGFFTEEPPLQTEQAPPVQSVYIASTEIEEEGEVDDVYIMDISSNISENLNYYIDGKIQSNSSTSNCDVIQMESNSADLYGLNCIISPVTVEISPTLKVTQTHVNEPPKEPSSSGSNESKKRRTASPPLVPKIKTEIDPDPVTPTSSLNLPLSISTESLPFQKEKGVYLSSKLKQLLQTQDSKKITPSGEIPKLGPSVTSSPILPPVSSRFKRRTSSPPSSPQHSPVLRDFVKSGEGKTAWNDNIRSSKMPKLESHSNSPAWSLTGREEKETLSPLCFEDYKISKDWTAAPTFGSVCNQQPLDLSSGVKQRSDTKNKNQVPWESVLDLSVHKKPCSDTEIREYKENSIQPTCSGVKKKKPTTCMLQKVLLNEYNGTDAATDSTLGVNRSVSPSKSLEPQAEPDVDPSLSALSSVDTQPLSSSVSPVPQASAVPSICQLPPLLTPTNPPSPPPCPPMLTVATSPPPLLPTMPLSIPEASASATNTSSCPSPLSNTTTQSPLPVLSPTVSPSPSPVPSVEPLISAASPGPPTLSSSSSSSSSSSFSSSSSSSSPSPPPLSVVSSVVSSADNLENTLPIIKQEEAETEQQKAREDPHTSGESGVVQETFNKSFVCNVCESPFLSIKDLTKHLSIHAEEWPFKCEFCVQLFRDKTDLSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQHQRDLHPDKECTHHEFESGTLRPQNFTDPSKANVEHMQSLSEDSLEPSKEEEDEDLNDSSEELYTTIKIMASGVKSKDPDVRMGLNQHYPSFKPPPFQYHHRNPMGIGVTATNFTTHNIPQTFTTAIRCTKCGKSVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPKNGMVVIAGPGKNAFRRMGQPKRLNFNIEISKMSSNKLKISALKKKNQLVQKAILQKKKAAQQKADLKTHPSESDPHICPYCNREFTYIGSLNKHASFSCPKKPISPSSKKNSSKKGASSSPASSEKGSNQRRRTADAEIKMQSMQPHLGKTRARTSGPAQLQLPSASFRSKQNVKFVPSIRSKKPNSSSSLRNSSPVRVSRMSHVEGKKTKVVAKNSSSGISSKASRKLHVRIQRNNKAVLPSKSAVASKKKADRFMVKARERIGGPITRSLQQAANAEAAENKRDESSAKQELKDFRNLL
SIO_010081: PRDM2
subclass of: SO_0000673
so part of: PRDM2
location: join(385077..385085,393996..394113,395391..395494,399327..399479,405951..406077,427209..427316,427743..432114,434032..434044)
location: region:385077-434044:1
so has part: feature:385077-385085:1:exon
so has part: feature:393996-394113:1:exon
so has part: feature:395391-395494:1:exon
so has part: feature:399327-399479:1:exon
so has part: feature:405951-406077:1:exon
so has part: feature:427209-427316:1:exon
so has part: feature:427743-432114:1:exon
so has part: feature:434032-434044:1:exon

XP_030364091.1
type: Protein
SIO_000068: ncbiprotein

position:434044:1
position: 434044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385077-385085:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:393996-394113:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395391-395494:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399327-399479:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:405951-406077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:427209-427316:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:427743-432114:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:434032-434044:1:exon

PRDM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: PRDM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 2 isoform X3
translation: MWEVYYPNLGWMCVDATDPEKGNWLRYINWARSGKEQNLFPLEINRTIYYKSLKPIAPGEELLVWYNGEDDPEIAAAIEEERASARSRRHSPKAKKGKKKTQEGKKGKKAVDTKQKKADLDSTAADMRDSKEGRKEEDEAPSVSAVLSLEQTAVIQEMVNQDVLPKLMIPSPTSEPQMVTEDKQGEAINCASDDFDDEDEEEDEEEEDEEELEDTNMPKENAEMPLVCEEKLDCMEEQKSTSEESPESSPKKKLVVKIPKARGESNGDVPETFMFPCQHCERKFTTKQGLERHMHIHISTVNHAFKCRYCGKAFGTQINRRRHERRHEAGPKRKPFLTLTSSQHLDNVADNQVVVDDGLKEDLNVSSLVQDSVVLDSEKVSQEMSNSAFAEENKEPKELHPCKYCKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGFFTEEPPLQTEQAPPVQSVYIASTEIEEEGEVDDVYIMDISSNISENLNYYIDGKIQSNSSTSNCDVIQMESNSADLYGLNCIISPVTVEISPTLKVTQTHVNEPPKEPSSSGSNESKKRRTASPPLVPKIKTEIDPDPVTPTSSLNLPLSISTESLPFQKEKGVYLSSKLKQLLQTQDSKKITPSGEIPKLGPSVTSSPILPPVSSRFKRRTSSPPSSPQHSPVLRDFVKSGEGKTAWNDNIRSSKMPKLESHSNSPAWSLTGREEKETLSPLCFEDYKISKDWTAAPTFGSVCNQQPLDLSSGVKQRSDTKNKNQVPWESVLDLSVHKKPCSDTEIREYKENSIQPTCSGVKKKKPTTCMLQKVLLNEYNGTDAATDSTLGVNRSVSPSKSLEPQAEPDVDPSLSALSSVDTQPLSSSVSPVPQASAVPSICQLPPLLTPTNPPSPPPCPPMLTVATSPPPLLPTMPLSIPEASASATNTSSCPSPLSNTTTQSPLPVLSPTVSPSPSPVPSVEPLISAASPGPPTLSSSSSSSSSSSFSSSSSSSSPSPPPLSVVSSVVSSADNLENTLPIIKQEEAETEQQKAREDPHTSGESGVVQETFNKSFVCNVCESPFLSIKDLTKHLSIHAEEWPFKCEFCVQLFRDKTDLSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQHQRDLHPDKECTHHEFESGTLRPQNFTDPSKANVEHMQSLSEDSLEPSKEEEDEDLNDSSEELYTTIKIMASGVKSKDPDVRMGLNQHYPSFKPPPFQYHHRNPMGIGVTATNFTTHNIPQTFTTAIRCTKCGKSVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPKNGMVVIAGPGKNAFRRMGQPKRLNFNIEISKMSSNKLKISALKKKNQLVQKAILQKKKAAQQKADLKTHPSESDPHICPYCNREFTYIGSLNKHASFSCPKKPISPSSKKNSSKKGASSSPASSEKGSNQRRRTADAEIKMQSMQPHLGKTRARTSGPAQLQLPSASFRSKQNVKFVPSIRSKKPNSSSSLRNSSPVRVSRMSHVEGKKTKVVAKNSSSGISSKASRKLHVRIQRNNKAVLPSKSAVASKKKADRFMVKARERIGGPITRSLQQAANAEAAENKRDESSAKQELKDFSYRLRMASRCPSSSSHNTSTRQCKKSNCTAPHFLKE
SIO_010081: PRDM2
subclass of: SO_0000673
so part of: PRDM2
location: join(395486..395494,399327..399479,405951..406077,427209..427316,427743..432114,445086..445194)
location: region:395486-445194:1
so has part: feature:395486-395494:1:exon
so has part: feature:399327-399479:1:exon
so has part: feature:405951-406077:1:exon
so has part: feature:427209-427316:1:exon
so has part: feature:427743-432114:1:exon
so has part: feature:445086-445194:1:exon

XP_030364092.1
type: Protein
SIO_000068: ncbiprotein

position:395486:1
position: 395486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395486-395494:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:399327-399479:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405951-406077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427209-427316:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:427743-432114:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:445086-445194:1:exon

PRDM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: PRDM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 2 isoform X4
translation: MRDSKEGRKEEDEAPSVSAVLSLEQTAVIQEMVNQDVLPKLMIPSPTSEPQMVTEDKQGEAINCASDDFDDEDEEEDEEEEDEEELEDTNMPKENAEMPLVCEEKLDCMEEQKSTSEESPESSPKKKLVVKIPKARGESNGDVPETFMFPCQHCERKFTTKQGLERHMHIHISTVNHAFKCRYCGKAFGTQINRRRHERRHEAGPKRKPFLTLTSSQHLDNVADNQVVVDDGLKEDLNVSSLVQDSVVLDSEKVSQEMSNSAFAEENKEPKELHPCKYCKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGFFTEEPPLQTEQAPPVQSVYIASTEIEEEGEVDDVYIMDISSNISENLNYYIDGKIQSNSSTSNCDVIQMESNSADLYGLNCIISPVTVEISPTLKVTQTHVNEPPKEPSSSGSNESKKRRTASPPLVPKIKTEIDPDPVTPTSSLNLPLSISTESLPFQKEKGVYLSSKLKQLLQTQDSKKITPSGEIPKLGPSVTSSPILPPVSSRFKRRTSSPPSSPQHSPVLRDFVKSGEGKTAWNDNIRSSKMPKLESHSNSPAWSLTGREEKETLSPLCFEDYKISKDWTAAPTFGSVCNQQPLDLSSGVKQRSDTKNKNQVPWESVLDLSVHKKPCSDTEIREYKENSIQPTCSGVKKKKPTTCMLQKVLLNEYNGTDAATDSTLGVNRSVSPSKSLEPQAEPDVDPSLSALSSVDTQPLSSSVSPVPQASAVPSICQLPPLLTPTNPPSPPPCPPMLTVATSPPPLLPTMPLSIPEASASATNTSSCPSPLSNTTTQSPLPVLSPTVSPSPSPVPSVEPLISAASPGPPTLSSSSSSSSSSSFSSSSSSSSPSPPPLSVVSSVVSSADNLENTLPIIKQEEAETEQQKAREDPHTSGESGVVQETFNKSFVCNVCESPFLSIKDLTKHLSIHAEEWPFKCEFCVQLFRDKTDLSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQHQRDLHPDKECTHHEFESGTLRPQNFTDPSKANVEHMQSLSEDSLEPSKEEEDEDLNDSSEELYTTIKIMASGVKSKDPDVRMGLNQHYPSFKPPPFQYHHRNPMGIGVTATNFTTHNIPQTFTTAIRCTKCGKSVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPKNGMVVIAGPGKNAFRRMGQPKRLNFNIEISKMSSNKLKISALKKKNQLVQKAILQKKKAAQQKADLKTHPSESDPHICPYCNREFTYIGSLNKHASFSCPKKPISPSSKKNSSKKGASSSPASSEKGSNQRRRTADAEIKMQSMQPHLGKTRARTSGPAQLQLPSASFRSKQNVKFVPSIRSKKPNSSSSLRNSSPVRVSRMSHVEGKKTKVVAKNSSSGISSKASRKLHVRIQRNNKAVLPSKSAVASKKKADRFMVKARERIGGPITRSLQQAANAEAAENKRDESSAKQELKDFSYRLRMASRCPSSSSHNTSTRQCKKSNCTAPHFLKE
SIO_010081: PRDM2
subclass of: SO_0000673
so part of: PRDM2
location: join(427298..427316,427743..432114,445086..445194)
location: region:427298-445194:1
so has part: feature:427298-427316:1:exon
so has part: feature:427743-432114:1:exon
so has part: feature:445086-445194:1:exon

XP_030364093.1
type: Protein
SIO_000068: ncbiprotein

position:427298:1
position: 427298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427298-427316:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:427743-432114:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445086-445194:1:exon

KAZN
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: KAZN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 456828..682369
location: region:456828-682369:1
so has part: feature:456828-682369:1:exon
subclass of: SO_0000010

115617369
type: Gene
SIO_000068: ncbigene

position:456828:1
position: 456828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:682369:1
position: 682369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456828-682369:1:exon

KAZN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: KAZN
product: kazrin, periplakin interacting protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 90 long SRA reads, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030507749.1
SIO_010081: KAZN
subclass of: SO_0000673
so part of: KAZN
location: join(456828..457629,513996..514153,590805..590982,668577..668768,677114..677250,677684..677854,678447..678636,679261..679391,679624..679674,680394..682369)
location: region:456828-682369:1
so has part: feature:456828-457629:1:exon
so has part: feature:513996-514153:1:exon
so has part: feature:590805-590982:1:exon
so has part: feature:668577-668768:1:exon
so has part: feature:677114-677250:1:exon
so has part: feature:677684-677854:1:exon
so has part: feature:678447-678636:1:exon
so has part: feature:679261-679391:1:exon
so has part: feature:679624-679674:1:exon
so has part: feature:680394-682369:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:456828-457629:1:exon

position:457629:1
position: 457629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:513996-514153:1:exon

position:513996:1
position: 513996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514153:1
position: 514153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:590805-590982:1:exon

position:590805:1
position: 590805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:590982:1
position: 590982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:668577-668768:1:exon

position:668577:1
position: 668577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:668768:1
position: 668768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:677114-677250:1:exon

position:677114:1
position: 677114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677250:1
position: 677250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:677684-677854:1:exon

position:677684:1
position: 677684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677854:1
position: 677854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:678447-678636:1:exon

position:678447:1
position: 678447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678636:1
position: 678636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:679261-679391:1:exon

position:679261:1
position: 679261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679391:1
position: 679391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:679624-679674:1:exon

position:679624:1
position: 679624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679674:1
position: 679674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:680394-682369:1:exon

position:680394:1
position: 680394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KAZN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: KAZN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kazrin isoform X1
translation: MTNRKDSKIAMDSSLVTSSSAAGPVTFSHVFGQQCQLMEAAVESLHSLNDQISHFIVNKSKTLDEDEDAFLPSEKESLKNAMMLMRHLLMDAQAKILHMMDDNKQLALRIDGALQAAGQEVTALRAELAATGRRLAELGSDPAMEHGPHSAQALLREEVAQLQEEVHLLRQMKEMLTKDLEETHGSKSPEVLSATELKVQLAQREQELARAKEALQAMKADRKRLKVEKTDLVSQMQQLYATLESREEQLRDFIRNYEQHRKESEDAVKALAKEKDLLEREKWELRRQAKEATDHASALRSQLDLKDNRMKELEAELAMAKQSLATLTKDVPKRHSLAMPGETVLNGNQEWVMQADLPLTAAIRQSQQTLYHSHPQHSADRQAVRVSPCHSRQPSIISDASAAEGDRSSTPSDINSPRHRTHSLCNGDSPGPVQKNLHNPIVQSLEDLEDQKRKKKKEKMGFGSISRVFARGKQRKSLDPGLFDGTAPDYYIEEDADW
SIO_010081: KAZN
subclass of: SO_0000673
so part of: KAZN
location: join(457509..457629,513996..514153,590805..590982,668577..668768,677114..677250,677684..677854,678447..678636,679261..679391,679624..679674,680394..680561)
location: region:457509-680561:1
so has part: feature:457509-457629:1:exon
so has part: feature:513996-514153:1:exon
so has part: feature:590805-590982:1:exon
so has part: feature:668577-668768:1:exon
so has part: feature:677114-677250:1:exon
so has part: feature:677684-677854:1:exon
so has part: feature:678447-678636:1:exon
so has part: feature:679261-679391:1:exon
so has part: feature:679624-679674:1:exon
so has part: feature:680394-680561:1:exon

XP_030363609.1
type: Protein
SIO_000068: ncbiprotein

position:457509:1
position: 457509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680561:1
position: 680561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457509-457629:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:513996-514153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590805-590982:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:668577-668768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:677114-677250:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:677684-677854:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:678447-678636:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:679261-679391:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:679624-679674:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:680394-680561:1:exon

KAZN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: KAZN
product: kazrin, periplakin interacting protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 86 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030507750.1
SIO_010081: KAZN
subclass of: SO_0000673
so part of: KAZN
location: join(662215..662382,668577..668768,677114..677250,677684..677854,678447..678636,679261..679391,679624..679674,680394..682369)
location: region:662215-682369:1
so has part: feature:662215-662382:1:exon
so has part: feature:668577-668768:1:exon
so has part: feature:677114-677250:1:exon
so has part: feature:677684-677854:1:exon
so has part: feature:678447-678636:1:exon
so has part: feature:679261-679391:1:exon
so has part: feature:679624-679674:1:exon
so has part: feature:680394-682369:1:exon

position:662215:1
position: 662215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662215-662382:1:exon

position:662382:1
position: 662382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:668577-668768:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:677114-677250:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:677684-677854:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:678447-678636:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:679261-679391:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:679624-679674:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:680394-682369:1:exon

KAZN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: KAZN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kazrin isoform X2
translation: MKSEQEESKPGPCRCEHGSAPRPAYCSCPWGRRGAAGNDAQGGVLCPCLAHAALLREEVAQLQEEVHLLRQMKEMLTKDLEETHGSKSPEVLSATELKVQLAQREQELARAKEALQAMKADRKRLKVEKTDLVSQMQQLYATLESREEQLRDFIRNYEQHRKESEDAVKALAKEKDLLEREKWELRRQAKEATDHASALRSQLDLKDNRMKELEAELAMAKQSLATLTKDVPKRHSLAMPGETVLNGNQEWVMQADLPLTAAIRQSQQTLYHSHPQHSADRQAVRVSPCHSRQPSIISDASAAEGDRSSTPSDINSPRHRTHSLCNGDSPGPVQKNLHNPIVQSLEDLEDQKRKKKKEKMGFGSISRVFARGKQRKSLDPGLFDGTAPDYYIEEDADW
SIO_010081: KAZN
subclass of: SO_0000673
so part of: KAZN
location: join(662226..662382,668577..668768,677114..677250,677684..677854,678447..678636,679261..679391,679624..679674,680394..680561)
location: region:662226-680561:1
so has part: feature:662226-662382:1:exon
so has part: feature:668577-668768:1:exon
so has part: feature:677114-677250:1:exon
so has part: feature:677684-677854:1:exon
so has part: feature:678447-678636:1:exon
so has part: feature:679261-679391:1:exon
so has part: feature:679624-679674:1:exon
so has part: feature:680394-680561:1:exon

XP_030363610.1
type: Protein
SIO_000068: ncbiprotein

position:662226:1
position: 662226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662226-662382:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:668577-668768:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:677114-677250:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:677684-677854:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:678447-678636:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:679261-679391:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:679624-679674:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:680394-680561:1:exon

TMEM51
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: TMEM51
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 689339..699823
location: region:689339-699823:1
so has part: feature:689339-699823:1:exon
subclass of: SO_0000010

115617401
type: Gene
SIO_000068: ncbigene

position:689339:1
position: 689339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:699823:1
position: 699823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:689339-699823:1:exon

TMEM51
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: TMEM51
product: transmembrane protein 51, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 146 long SRA reads, 13 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030507838.1
SIO_010081: TMEM51
subclass of: SO_0000673
so part of: TMEM51
location: join(689339..689409,696260..696708,698126..699823)
location: region:689339-699823:1
so has part: feature:689339-689409:1:exon
so has part: feature:696260-696708:1:exon
so has part: feature:698126-699823:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:689339-689409:1:exon

position:689409:1
position: 689409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:696260-696708:1:exon

position:696260:1
position: 696260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:696708:1
position: 696708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:698126-699823:1:exon

position:698126:1
position: 698126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM51
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: TMEM51
product: transmembrane protein 51, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 139 long SRA reads, 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030507839.1
SIO_010081: TMEM51
subclass of: SO_0000673
so part of: TMEM51
location: join(691218..691579,696260..696708,698126..699823)
location: region:691218-699823:1
so has part: feature:691218-691579:1:exon
so has part: feature:696260-696708:1:exon
so has part: feature:698126-699823:1:exon

position:691218:1
position: 691218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:691218-691579:1:exon

position:691579:1
position: 691579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:696260-696708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:698126-699823:1:exon

TMEM51
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: TMEM51
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 51
translation: MAQSRANGSHYALTAIGLGMLVLGIIMAVWNLVPGFGPDNKPTTHAGNSSKPDRGNGGTLKSKTFSVAYVLVGAGVLLLLLSICLNIRDKKRQSEDIVHVQHQVSVEPSHQEDSQEEDDDTSSQYYVPSYEEVMNTGYSEPRDLDRSTRISVSLPSYESLTGLDDSTPAPSAVGTEPGTERPPGQHSSRLSKRLKPLKVRRIKSEKLHLKDIRLNLAQGNSTAPITIEPLTPPPKYEEIQEKVPGSQQMT
SIO_010081: TMEM51
subclass of: SO_0000673
so part of: TMEM51
location: join(696368..696708,698126..698537)
location: region:696368-698537:1
so has part: feature:696368-696708:1:exon
so has part: feature:698126-698537:1:exon

XP_030363698.1
type: Protein
SIO_000068: ncbiprotein

position:696368:1
position: 696368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:698537:1
position: 698537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:696368-696708:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:698126-698537:1:exon

TMEM51
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: TMEM51
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 51
translation: MAQSRANGSHYALTAIGLGMLVLGIIMAVWNLVPGFGPDNKPTTHAGNSSKPDRGNGGTLKSKTFSVAYVLVGAGVLLLLLSICLNIRDKKRQSEDIVHVQHQVSVEPSHQEDSQEEDDDTSSQYYVPSYEEVMNTGYSEPRDLDRSTRISVSLPSYESLTGLDDSTPAPSAVGTEPGTERPPGQHSSRLSKRLKPLKVRRIKSEKLHLKDIRLNLAQGNSTAPITIEPLTPPPKYEEIQEKVPGSQQMT
SIO_010081: TMEM51
subclass of: SO_0000673
so part of: TMEM51
location: join(696368..696708,698126..698537)
location: region:696368-698537:1
so has part: feature:696368-696708:1:exon
so has part: feature:698126-698537:1:exon

XP_030363699.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:696368-696708:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:698126-698537:1:exon

LOC115617329
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115617329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 701810..731328
location: region:701810-731328:1
so has part: feature:701810-731328:1:exon
subclass of: SO_0000010

115617329
type: Gene
SIO_000068: ncbigene

position:701810:1
position: 701810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731328:1
position: 731328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:701810-731328:1:exon

LOC115617329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115617329
product: EF-hand domain-containing protein D2, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030507671.1
SIO_010081: LOC115617329
subclass of: SO_0000673
so part of: LOC115617329
location: join(701810..702212,702492..702698,704810..705080,706378..706463,706710..706925,707586..707709,708497..708627,710339..710404,710774..710878,711247..711354,712310..712393,712737..712889,713836..714022,715564..715634,715948..716085,716852..716959,717169..717258,717487..717712,718451..718566,719082..719168)
location: region:701810-719168:1
so has part: feature:701810-702212:1:exon
so has part: feature:702492-702698:1:exon
so has part: feature:704810-705080:1:exon
so has part: feature:706378-706463:1:exon
so has part: feature:706710-706925:1:exon
so has part: feature:707586-707709:1:exon
so has part: feature:708497-708627:1:exon
so has part: feature:710339-710404:1:exon
so has part: feature:710774-710878:1:exon
so has part: feature:711247-711354:1:exon
so has part: feature:712310-712393:1:exon
so has part: feature:712737-712889:1:exon
so has part: feature:713836-714022:1:exon
so has part: feature:715564-715634:1:exon
so has part: feature:715948-716085:1:exon
so has part: feature:716852-716959:1:exon
so has part: feature:717169-717258:1:exon
so has part: feature:717487-717712:1:exon
so has part: feature:718451-718566:1:exon
so has part: feature:719082-719168:1:exon

position:719168:1
position: 719168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:701810-702212:1:exon

position:702212:1
position: 702212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:702492-702698:1:exon

position:702492:1
position: 702492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:702698:1
position: 702698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:704810-705080:1:exon

position:704810:1
position: 704810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705080:1
position: 705080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:706378-706463:1:exon

position:706378:1
position: 706378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706463:1
position: 706463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:706710-706925:1:exon

position:706710:1
position: 706710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706925:1
position: 706925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:707586-707709:1:exon

position:707586:1
position: 707586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707709:1
position: 707709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:708497-708627:1:exon

position:708497:1
position: 708497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:708627:1
position: 708627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:710339-710404:1:exon

position:710339:1
position: 710339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710404:1
position: 710404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:710774-710878:1:exon

position:710774:1
position: 710774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710878:1
position: 710878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:711247-711354:1:exon

position:711247:1
position: 711247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:711354:1
position: 711354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:712310-712393:1:exon

position:712310:1
position: 712310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:712393:1
position: 712393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:712737-712889:1:exon

position:712737:1
position: 712737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:712889:1
position: 712889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:713836-714022:1:exon

position:713836:1
position: 713836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714022:1
position: 714022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:715564-715634:1:exon

position:715564:1
position: 715564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:715634:1
position: 715634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:715948-716085:1:exon

position:715948:1
position: 715948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:716085:1
position: 716085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:716852-716959:1:exon

position:716852:1
position: 716852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:716959:1
position: 716959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:717169-717258:1:exon

position:717169:1
position: 717169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717258:1
position: 717258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:717487-717712:1:exon

position:717487:1
position: 717487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717712:1
position: 717712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:718451-718566:1:exon

position:718451:1
position: 718451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718566:1
position: 718566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:719082-719168:1:exon

position:719082:1
position: 719082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115617329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115617329
product: EF-hand domain-containing protein D2, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030507672.1
SIO_010081: LOC115617329
subclass of: SO_0000673
so part of: LOC115617329
location: join(701810..702212,702492..702698,704810..705080,706378..706463,706710..706925,707586..707709,708497..708669,710339..710404)
location: region:701810-710404:1
so has part: feature:701810-702212:1:exon
so has part: feature:702492-702698:1:exon
so has part: feature:704810-705080:1:exon
so has part: feature:706378-706463:1:exon
so has part: feature:706710-706925:1:exon
so has part: feature:707586-707709:1:exon
so has part: feature:708497-708669:1:exon
so has part: feature:710339-710404:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:701810-702212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702492-702698:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:704810-705080:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706378-706463:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:706710-706925:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:707586-707709:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:708497-708669:1:exon

position:708669:1
position: 708669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:710339-710404:1:exon

LOC115617329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115617329
product: EF-hand domain-containing protein D2, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030507673.1
SIO_010081: LOC115617329
subclass of: SO_0000673
so part of: LOC115617329
location: join(701810..702212,702492..702698,704810..705080,706378..706463,706753..706864)
location: region:701810-706864:1
so has part: feature:701810-702212:1:exon
so has part: feature:702492-702698:1:exon
so has part: feature:704810-705080:1:exon
so has part: feature:706378-706463:1:exon
so has part: feature:706753-706864:1:exon

position:706864:1
position: 706864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:701810-702212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702492-702698:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:704810-705080:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706378-706463:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:706753-706864:1:exon

position:706753:1
position: 706753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115617329
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2489341
gene: LOC115617329
product: EF-hand domain-containing protein D2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 62 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003994570.1
SIO_010081: LOC115617329
so part of: LOC115617329
location: join(701812..702212,702492..702698,704810..705080,706378..706463,706710..706925,707586..707709,708497..708627,710339..710404,710774..710878,711247..711354,712310..712393,712737..712889,713836..714022,715564..715634,715948..716085,716852..716959,717169..717258,717487..717712,718230..718311,718451..718566,719082..719241,719567..719672,721617..721752,722049..722223,722310..722437,722640..722723,723527..723747,724211..724394,725261..725367,729948..730095,730227..730361,730496..731328)
location: region:701812-731328:1
so has part: feature:701812-702212:1:exon
so has part: feature:702492-702698:1:exon
so has part: feature:704810-705080:1:exon
so has part: feature:706378-706463:1:exon
so has part: feature:706710-706925:1:exon
so has part: feature:707586-707709:1:exon
so has part: feature:708497-708627:1:exon
so has part: feature:710339-710404:1:exon
so has part: feature:710774-710878:1:exon
so has part: feature:711247-711354:1:exon
so has part: feature:712310-712393:1:exon
so has part: feature:712737-712889:1:exon
so has part: feature:713836-714022:1:exon
so has part: feature:715564-715634:1:exon
so has part: feature:715948-716085:1:exon
so has part: feature:716852-716959:1:exon
so has part: feature:717169-717258:1:exon
so has part: feature:717487-717712:1:exon
so has part: feature:718230-718311:1:exon
so has part: feature:718451-718566:1:exon
so has part: feature:719082-719241:1:exon
so has part: feature:719567-719672:1:exon
so has part: feature:721617-721752:1:exon
so has part: feature:722049-722223:1:exon
so has part: feature:722310-722437:1:exon
so has part: feature:722640-722723:1:exon
so has part: feature:723527-723747:1:exon
so has part: feature:724211-724394:1:exon
so has part: feature:725261-725367:1:exon
so has part: feature:729948-730095:1:exon
so has part: feature:730227-730361:1:exon
so has part: feature:730496-731328:1:exon

position:701812:1
position: 701812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:701812-702212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702492-702698:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:704810-705080:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706378-706463:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:706710-706925:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:707586-707709:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:708497-708627:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:710339-710404:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:710774-710878:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:711247-711354:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:712310-712393:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:712737-712889:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:713836-714022:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:715564-715634:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:715948-716085:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:716852-716959:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:717169-717258:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:717487-717712:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:718230-718311:1:exon

position:718230:1
position: 718230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718311:1
position: 718311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:718451-718566:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:719082-719241:1:exon

position:719241:1
position: 719241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:719567-719672:1:exon

position:719567:1
position: 719567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:719672:1
position: 719672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:721617-721752:1:exon

position:721617:1
position: 721617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:721752:1
position: 721752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:722049-722223:1:exon

position:722049:1
position: 722049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722223:1
position: 722223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:722310-722437:1:exon

position:722310:1
position: 722310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722437:1
position: 722437
reference: sequence
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urn:…
SIO_000300: 26
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position:722640:1
position: 722640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722723:1
position: 722723
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 27
SIO_000628: feature:723527-723747:1:exon

position:723527:1
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reference: sequence
type: ForwardStrandPosition
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position:723747:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 28
SIO_000628: feature:724211-724394:1:exon

position:724211:1
position: 724211
reference: sequence
type: ForwardStrandPosition
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position:724394:1
position: 724394
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 29
SIO_000628: feature:725261-725367:1:exon

position:725261:1
position: 725261
reference: sequence
type: ForwardStrandPosition
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position:725367:1
position: 725367
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 30
SIO_000628: feature:729948-730095:1:exon

position:729948:1
position: 729948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730095:1
position: 730095
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 31
SIO_000628: feature:730227-730361:1:exon

position:730227:1
position: 730227
reference: sequence
type: ForwardStrandPosition
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position:730361:1
position: 730361
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 32
SIO_000628: feature:730496-731328:1:exon

position:730496:1
position: 730496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115617329
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2489341
gene: LOC115617329
product: EF-hand domain-containing protein D2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 115 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003994566.1
SIO_010081: LOC115617329
so part of: LOC115617329
location: join(701818..702212,702492..702698,704810..705080,706378..706463,706710..706925,707586..707709,708497..708627,710339..710404,710774..710878,711247..711354,712310..712393,712737..712889,713836..714022,715564..715634,715948..716085,716852..716959,717169..717258,717487..717712,718230..718311,718451..718566,719082..719241,719567..719672,721617..721752,722310..722437,722640..722723,723527..723747,724211..724394,729948..730095,730227..730361,730496..731328)
location: region:701818-731328:1
so has part: feature:701818-702212:1:exon
so has part: feature:702492-702698:1:exon
so has part: feature:704810-705080:1:exon
so has part: feature:706378-706463:1:exon
so has part: feature:706710-706925:1:exon
so has part: feature:707586-707709:1:exon
so has part: feature:708497-708627:1:exon
so has part: feature:710339-710404:1:exon
so has part: feature:710774-710878:1:exon
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so has part: feature:712737-712889:1:exon
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so has part: feature:716852-716959:1:exon
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so has part: feature:719567-719672:1:exon
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so has part: feature:729948-730095:1:exon
so has part: feature:730227-730361:1:exon
so has part: feature:730496-731328:1:exon

position:701818:1
position: 701818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
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urn:…
SIO_000300: 12
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urn:…
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SIO_000300: 20
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urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
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urn:…
SIO_000300: 23
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urn:…
SIO_000300: 24
SIO_000628: feature:722310-722437:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:722640-722723:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:723527-723747:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:724211-724394:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:729948-730095:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:730227-730361:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:730496-731328:1:exon

LOC115617329
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2489341
gene: LOC115617329
product: EF-hand domain-containing protein D2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 121 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003994565.1
SIO_010081: LOC115617329
so part of: LOC115617329
location: join(701819..702212,702492..702698,704810..705080,706378..706463,706710..706925,707586..707709,708497..708627,710339..710404,710774..710878,711247..711354,712310..712393,712737..712889,713836..714022,715564..715634,715948..716085,716852..716959,717169..717258,717487..717712,718230..718311,718451..718566,719082..719241,719567..719672,721617..721752,722310..722437,722640..722723,723527..723747,724211..724394,725261..725367,729948..730095,730227..730361,730496..731328)
location: region:701819-731328:1
so has part: feature:701819-702212:1:exon
so has part: feature:702492-702698:1:exon
so has part: feature:704810-705080:1:exon
so has part: feature:706378-706463:1:exon
so has part: feature:706710-706925:1:exon
so has part: feature:707586-707709:1:exon
so has part: feature:708497-708627:1:exon
so has part: feature:710339-710404:1:exon
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so has part: feature:716852-716959:1:exon
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so has part: feature:719082-719241:1:exon
so has part: feature:719567-719672:1:exon
so has part: feature:721617-721752:1:exon
so has part: feature:722310-722437:1:exon
so has part: feature:722640-722723:1:exon
so has part: feature:723527-723747:1:exon
so has part: feature:724211-724394:1:exon
so has part: feature:725261-725367:1:exon
so has part: feature:729948-730095:1:exon
so has part: feature:730227-730361:1:exon
so has part: feature:730496-731328:1:exon

position:701819:1
position: 701819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:701819-702212:1:exon

urn:…
SIO_000300: 2
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SIO_000300: 3
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urn:…
SIO_000300: 4
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urn:…
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urn:…
SIO_000300: 12
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urn:…
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urn:…
SIO_000300: 14
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SIO_000300: 15
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urn:…
SIO_000300: 16
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urn:…
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urn:…
SIO_000300: 18
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urn:…
SIO_000300: 19
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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
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urn:…
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urn:…
SIO_000300: 23
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urn:…
SIO_000300: 24
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urn:…
SIO_000300: 25
SIO_000628: feature:722640-722723:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:723527-723747:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:724211-724394:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:725261-725367:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:729948-730095:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:730227-730361:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:730496-731328:1:exon

LOC115617329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115617329
product: EF-hand domain-containing protein D2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 110 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030507670.1
SIO_010081: LOC115617329
subclass of: SO_0000673
so part of: LOC115617329
location: join(701819..702212,702492..702698,704810..705080,706378..706463,706710..706925,707586..707709,708497..708627,710339..710404,710774..710878,711247..711354,712310..712393,712737..712889,713836..714022,715564..715634,715948..716085,716852..716959,717169..717258,717487..717712,718230..718311,718451..718566,719082..719241,719567..719672,721617..721752,722310..722437,722640..722723,723527..723747,724211..724394,725261..725646)
location: region:701819-725646:1
so has part: feature:701819-702212:1:exon
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so has part: feature:724211-724394:1:exon
so has part: feature:725261-725646:1:exon

position:725646:1
position: 725646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:701819-702212:1:exon

urn:…
SIO_000300: 2
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urn:…
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urn:…
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urn:…
SIO_000300: 26
SIO_000628: feature:723527-723747:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:724211-724394:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:725261-725646:1:exon

LOC115617329
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2489341
gene: LOC115617329
product: EF-hand domain-containing protein D2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 120 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003994567.1
SIO_010081: LOC115617329
so part of: LOC115617329
location: join(701821..702212,702492..702698,706710..706925,707586..707709,708497..708627,710339..710404,710774..710878,711247..711354,712310..712393,712737..712889,713836..714022,715564..715634,715948..716085,716852..716959,717169..717258,717487..717712,718230..718311,718451..718566,719082..719241,719567..719672,721617..721752,722310..722437,722640..722723,723527..723747,724211..724394,725261..725367,729948..730095,730227..730361,730496..731328)
location: region:701821-731328:1
so has part: feature:701821-702212:1:exon
so has part: feature:702492-702698:1:exon
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so has part: feature:729948-730095:1:exon
so has part: feature:730227-730361:1:exon
so has part: feature:730496-731328:1:exon

position:701821:1
position: 701821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:701821-702212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702492-702698:1:exon

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SIO_000300: 9
SIO_000628: feature:712310-712393:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:712737-712889:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:713836-714022:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:715564-715634:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:715948-716085:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:716852-716959:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:717169-717258:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:717487-717712:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:718230-718311:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:718451-718566:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:719082-719241:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:719567-719672:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:721617-721752:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:722310-722437:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:722640-722723:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:723527-723747:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:724211-724394:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:725261-725367:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:729948-730095:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:730227-730361:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:730496-731328:1:exon

LOC115617329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115617329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead-associated domain-containing protein 1 isoform X1
translation: MSWSEVLCVSVCVGWGIPEGVVVVFHARLRGWMMRAFLRSSEGCFQLKPHTTTIGQHEGSDIVLKSTGVAEHHAALEFTASDNSFCLQDLNSPHGTFINGCQVQNAAVRVSPGDVLRFGKGGAAFELVVDGAAQVSNLPMKRCTGWTGQLQVAAEPKPSTPASPAHLPLLQWQHPPGSPGRCAPGATGHVSHPLLWKRPRSAWARSMATTVSLDAFSRTSAVRPVSTSVLSDGASGVGRAPSLRTQDAKEKEKGEKEEMGRLSGLETESKQKDAAIRDLQEEIAAMAKTLAQVAARNEVELTQKLLAFDQELEAKAELIRALKEQIHNLEKGSSQVFSHSLYERDLEIGRLRKESEKLKRDHALATGLVTSLQREIAGKEQEIQQLQQEVEKVKKGNRAKDNQLAVLSAKCSRIREEMKQELGEREVTACRNRIKELEHNLERLQGEVQKYCIEQESIRSQLAEKAKAEEELREAGARQALQLQEMGRRERLLRADLARAKEQLESFKTQVMRACSPAAAGSPGKANTEQQVIEKVRQICDESQHSHEREKCLQEEISSRLAKEKEVSANAEVFNKSLQELQACLNSSCSSASLRGELGKLEAVRLDPSISTIGMAAVEMARVLLSWLEGAEQLLAGVGMDLHKGLLAALGTLVETSQETARRNQTLQAQLETAQESQAALLQEHTKELEEKHEQDLQIKIKHVLLEKDKESKELLESAVAAEKSKCRQSLEEEQKKIQDLESHLRSMAEAIERKSKEQEVADCKLQEAVQKLEETTVREMLLQQRVLAQDEQLRTLQEENELQRQKLQEEIEGYKEQSKQHALTVVALEERLLEAKEQQKTLEEEHTALVNKMKGFGGDTCQAPSGAWLEVCPAAESHGCLRKLREELVMAQNTLLSKEAAISVLTKELVETRARLTDMRGELSEERKVELEQNLSRLKRQEQELNLLREKLSRMSSLVEKKDQALKAATEELRQAQAHCQELKDAQELAEKPEATPGTPAQAGEASEQEPALDLANLGMRCRGLRHEETIQRQREGLAELRERVKVLEKRQSSATMMKSSEPVVVLTRDLAEEIVQRTGHEKEPAPVSGPNLQASKVPGCVANGGSHGAASREMGDMTDFGEKMYLDAIGALGSLMKVKELSGLQSLKHLPPEERGKAELQRRKDLELLCHKIRNLKSRLERNEEKLKEYEGRVEQLRLNQASLQRCQEEVSKLEEEAYREAEEKALLQEALERTQLQLNQEKRQQRAAKLHKGKTREQPGAKKPFCSGKLKAKEHTAEAVKMGSA
SIO_010081: LOC115617329
subclass of: SO_0000673
so part of: LOC115617329
location: join(702018..702212,702492..702698,704810..705080,706378..706463,706710..706925,707586..707709,708497..708627,710339..710404,710774..710878,711247..711354,712310..712393,712737..712889,713836..714022,715564..715634,715948..716085,716852..716959,717169..717258,717487..717712,718230..718311,718451..718566,719082..719241,719567..719672,721617..721752,722310..722437,722640..722723,723527..723747,724211..724394,725261..725344)
location: region:702018-725344:1
so has part: feature:702018-702212:1:exon
so has part: feature:702492-702698:1:exon
so has part: feature:704810-705080:1:exon
so has part: feature:706378-706463:1:exon
so has part: feature:706710-706925:1:exon
so has part: feature:707586-707709:1:exon
so has part: feature:708497-708627:1:exon
so has part: feature:710339-710404:1:exon
so has part: feature:710774-710878:1:exon
so has part: feature:711247-711354:1:exon
so has part: feature:712310-712393:1:exon
so has part: feature:712737-712889:1:exon
so has part: feature:713836-714022:1:exon
so has part: feature:715564-715634:1:exon
so has part: feature:715948-716085:1:exon
so has part: feature:716852-716959:1:exon
so has part: feature:717169-717258:1:exon
so has part: feature:717487-717712:1:exon
so has part: feature:718230-718311:1:exon
so has part: feature:718451-718566:1:exon
so has part: feature:719082-719241:1:exon
so has part: feature:719567-719672:1:exon
so has part: feature:721617-721752:1:exon
so has part: feature:722310-722437:1:exon
so has part: feature:722640-722723:1:exon
so has part: feature:723527-723747:1:exon
so has part: feature:724211-724394:1:exon
so has part: feature:725261-725344:1:exon

XP_030363530.1
type: Protein
SIO_000068: ncbiprotein

position:702018:1
position: 702018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725344:1
position: 725344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:702018-702212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702492-702698:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:704810-705080:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706378-706463:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:706710-706925:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:707586-707709:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:708497-708627:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:710339-710404:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:710774-710878:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:711247-711354:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:712310-712393:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:712737-712889:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:713836-714022:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:715564-715634:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:715948-716085:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:716852-716959:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:717169-717258:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:717487-717712:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:718230-718311:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:718451-718566:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:719082-719241:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:719567-719672:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:721617-721752:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:722310-722437:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:722640-722723:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:723527-723747:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:724211-724394:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:725261-725344:1:exon

LOC115617329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115617329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead-associated domain-containing protein 1 isoform X2
translation: MSWSEVLCVSVCVGWGIPEGVVVVFHARLRGWMMRAFLRSSEGCFQLKPHTTTIGQHEGSDIVLKSTGVAEHHAALEFTASDNSFCLQDLNSPHGTFINGCQVQNAAVRVSPGDVLRFGKGGAAFELVVDGAAQVSNLPMKRCTGWTGQLQVAAEPKPSTPASPAHLPLLQWQHPPGSPGRCAPGATGHVSHPLLWKRPRSAWARSMATTVSLDAFSRTSAVRPVSTSVLSDGASGVGRAPSLRTQDAKEKEKGEKEEMGRLSGLETESKQKDAAIRDLQEEIAAMAKTLAQVAARNEVELTQKLLAFDQELEAKAELIRALKEQIHNLEKGSSQVFSHSLYERDLEIGRLRKESEKLKRDHALATGLVTSLQREIAGKEQEIQQLQQEVEKVKKGNRAKDNQLAVLSAKCSRIREEMKQELGEREVTACRNRIKELEHNLERLQGEVQKYCIEQESIRSQLAEKAKAEEELREAGARQALQLQEMGRRERLLRADLARAKEQLESFKTQVMRACSPAAAGSPGKANTEQQVIEKVRQICDESQHSHEREKCLQEEISSRLAKEKEVSANAEVFNKSLQELQACLNSSCSSASLRGELGKLEAVRLDPSISTIGMAAVEMARVLLSWLEGAEQLLAGVGMDLHKGLLAALGTLVETSQETARRNQTLQAQLETAQESQAALLQEHTKELEEKHEQDLQIKIKHVLLEKDKESKELLESAVAAEKSKCRQSLEEEQKKIQDLESHLRSMAEAIERKSKEQEVADCKLQEAVQKLEETTVREMLLQQRVLAQDEQLRTLQEENELQRQKLQEEIEGYKEQSKQHALTVVALEERLLEAKEQQKTLEEEHTALVNKMKGSSGRSWSWHKTRCCPRRLPSLC
SIO_010081: LOC115617329
subclass of: SO_0000673
so part of: LOC115617329
location: join(702018..702212,702492..702698,704810..705080,706378..706463,706710..706925,707586..707709,708497..708627,710339..710404,710774..710878,711247..711354,712310..712393,712737..712889,713836..714022,715564..715634,715948..716085,716852..716959,717169..717258,717487..717712,718451..718521)
location: region:702018-718521:1
so has part: feature:702018-702212:1:exon
so has part: feature:702492-702698:1:exon
so has part: feature:704810-705080:1:exon
so has part: feature:706378-706463:1:exon
so has part: feature:706710-706925:1:exon
so has part: feature:707586-707709:1:exon
so has part: feature:708497-708627:1:exon
so has part: feature:710339-710404:1:exon
so has part: feature:710774-710878:1:exon
so has part: feature:711247-711354:1:exon
so has part: feature:712310-712393:1:exon
so has part: feature:712737-712889:1:exon
so has part: feature:713836-714022:1:exon
so has part: feature:715564-715634:1:exon
so has part: feature:715948-716085:1:exon
so has part: feature:716852-716959:1:exon
so has part: feature:717169-717258:1:exon
so has part: feature:717487-717712:1:exon
so has part: feature:718451-718521:1:exon

XP_030363531.1
type: Protein
SIO_000068: ncbiprotein

position:718521:1
position: 718521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:702018-702212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702492-702698:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:704810-705080:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706378-706463:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:706710-706925:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:707586-707709:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:708497-708627:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:710339-710404:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:710774-710878:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:711247-711354:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:712310-712393:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:712737-712889:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:713836-714022:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:715564-715634:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:715948-716085:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:716852-716959:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:717169-717258:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:717487-717712:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:718451-718521:1:exon

LOC115617329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115617329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead-associated domain-containing protein 1 isoform X3
translation: MSWSEVLCVSVCVGWGIPEGVVVVFHARLRGWMMRAFLRSSEGCFQLKPHTTTIGQHEGSDIVLKSTGVAEHHAALEFTASDNSFCLQDLNSPHGTFINGCQVQNAAVRVSPGDVLRFGKGGAAFELVVDGAAQVSNLPMKRCTGWTGQLQVAAEPKPSTPASPAHLPLLQWQHPPGSPGRCAPGATGHVSHPLLWKRPRSAWARSMATTVSLDAFSRTSAVRPVSTSVLSDGASGVGRAPSLRTQDAKEKEKGEKEEMGRLSGLETESKQKDAAIRDLQEEIAAMAKTLAQVAARNEVELTQKLLAFDQELEAKAELIRALKEQIHNLEKGSSQVFSHSLYERDLEIGRLRKESEKLKRDHALATGLVTSLQREIAGKEQEIQQLQQEVEKVKKGNRAKDNQLAVLSAKVDSTASHRG
SIO_010081: LOC115617329
subclass of: SO_0000673
so part of: LOC115617329
location: join(702018..702212,702492..702698,704810..705080,706378..706463,706710..706925,707586..707709,708497..708657)
location: region:702018-708657:1
so has part: feature:702018-702212:1:exon
so has part: feature:702492-702698:1:exon
so has part: feature:704810-705080:1:exon
so has part: feature:706378-706463:1:exon
so has part: feature:706710-706925:1:exon
so has part: feature:707586-707709:1:exon
so has part: feature:708497-708657:1:exon

XP_030363532.1
type: Protein
SIO_000068: ncbiprotein

position:708657:1
position: 708657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:702018-702212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702492-702698:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:704810-705080:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706378-706463:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:706710-706925:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:707586-707709:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:708497-708657:1:exon

LOC115617329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115617329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead-associated domain-containing protein 1 isoform X4
translation: MSWSEVLCVSVCVGWGIPEGVVVVFHARLRGWMMRAFLRSSEGCFQLKPHTTTIGQHEGSDIVLKSTGVAEHHAALEFTASDNSFCLQDLNSPHGTFINGCQVQNAAVRVSPGDVLRFGKGGAAFELVVDGAAQVSNLPMKRCTGWTGQLQVAAEPKPSTPASPAHLPLLQWQHPPGSPGRCAPGATGHVSHPLLWKRPRSAWARSMATTVSLDAFSRTSAVRPVSTSVLSDGASGVGRAPSLRTQDAKEKEKNQSRKMQQ
SIO_010081: LOC115617329
subclass of: SO_0000673
so part of: LOC115617329
location: join(702018..702212,702492..702698,704810..705080,706378..706463,706753..706779)
location: region:702018-706779:1
so has part: feature:702018-702212:1:exon
so has part: feature:702492-702698:1:exon
so has part: feature:704810-705080:1:exon
so has part: feature:706378-706463:1:exon
so has part: feature:706753-706779:1:exon

XP_030363533.1
type: Protein
SIO_000068: ncbiprotein

position:706779:1
position: 706779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:702018-702212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702492-702698:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:704810-705080:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706378-706463:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:706753-706779:1:exon

LOC115617329
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2489341
gene: LOC115617329
product: EF-hand domain-containing protein D2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 122 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003994568.1
SIO_010081: LOC115617329
so part of: LOC115617329
location: join(703048..705080,706378..706463,706710..706925,707586..707709,708497..708627,710339..710404,710774..710878,711247..711354,712310..712393,712737..712889,713836..714022,715564..715634,715948..716085,716852..716959,717169..717258,717487..717712,718230..718311,718451..718566,719082..719241,719567..719672,721617..721752,722310..722437,722640..722723,723527..723747,724211..724394,725261..725367,729948..730095,730227..730361,730496..731328)
location: region:703048-731328:1
so has part: feature:703048-705080:1:exon
so has part: feature:706378-706463:1:exon
so has part: feature:706710-706925:1:exon
so has part: feature:707586-707709:1:exon
so has part: feature:708497-708627:1:exon
so has part: feature:710339-710404:1:exon
so has part: feature:710774-710878:1:exon
so has part: feature:711247-711354:1:exon
so has part: feature:712310-712393:1:exon
so has part: feature:712737-712889:1:exon
so has part: feature:713836-714022:1:exon
so has part: feature:715564-715634:1:exon
so has part: feature:715948-716085:1:exon
so has part: feature:716852-716959:1:exon
so has part: feature:717169-717258:1:exon
so has part: feature:717487-717712:1:exon
so has part: feature:718230-718311:1:exon
so has part: feature:718451-718566:1:exon
so has part: feature:719082-719241:1:exon
so has part: feature:719567-719672:1:exon
so has part: feature:721617-721752:1:exon
so has part: feature:722310-722437:1:exon
so has part: feature:722640-722723:1:exon
so has part: feature:723527-723747:1:exon
so has part: feature:724211-724394:1:exon
so has part: feature:725261-725367:1:exon
so has part: feature:729948-730095:1:exon
so has part: feature:730227-730361:1:exon
so has part: feature:730496-731328:1:exon

position:703048:1
position: 703048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:703048-705080:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:706378-706463:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:706710-706925:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:707586-707709:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:708497-708627:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:710339-710404:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:710774-710878:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:711247-711354:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:712310-712393:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:712737-712889:1:exon

urn:…
SIO_000300: 11
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urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
SIO_000628: feature:715948-716085:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:716852-716959:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:717169-717258:1:exon

urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
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urn:…
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urn:…
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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
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urn:…
SIO_000300: 23
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urn:…
SIO_000300: 24
SIO_000628: feature:723527-723747:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:724211-724394:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:725261-725367:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:729948-730095:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:730227-730361:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:730496-731328:1:exon

LOC115617329
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2489341
gene: LOC115617329
product: EF-hand domain-containing protein D2, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 121 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003994574.1
SIO_010081: LOC115617329
so part of: LOC115617329
location: join(703050..705080,706378..706463,706710..706925,707586..707709,708497..708669,710339..710404,710774..710878,711247..711354,712310..712393,712737..712889,713836..714022,715564..715634,715948..716085,716852..716959,717169..717258,717487..717712,718230..718311,718451..718566,719082..719241,719567..719672,721617..721752,722310..722437,722640..722723,723527..723747,724211..724394,725261..725367,729948..730095,730227..730361,730496..731328)
location: region:703050-731328:1
so has part: feature:703050-705080:1:exon
so has part: feature:706378-706463:1:exon
so has part: feature:706710-706925:1:exon
so has part: feature:707586-707709:1:exon
so has part: feature:708497-708669:1:exon
so has part: feature:710339-710404:1:exon
so has part: feature:710774-710878:1:exon
so has part: feature:711247-711354:1:exon
so has part: feature:712310-712393:1:exon
so has part: feature:712737-712889:1:exon
so has part: feature:713836-714022:1:exon
so has part: feature:715564-715634:1:exon
so has part: feature:715948-716085:1:exon
so has part: feature:716852-716959:1:exon
so has part: feature:717169-717258:1:exon
so has part: feature:717487-717712:1:exon
so has part: feature:718230-718311:1:exon
so has part: feature:718451-718566:1:exon
so has part: feature:719082-719241:1:exon
so has part: feature:719567-719672:1:exon
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so has part: feature:722310-722437:1:exon
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so has part: feature:725261-725367:1:exon
so has part: feature:729948-730095:1:exon
so has part: feature:730227-730361:1:exon
so has part: feature:730496-731328:1:exon

position:703050:1
position: 703050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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urn:…
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SIO_000300: 13
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urn:…
SIO_000300: 14
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urn:…
SIO_000300: 22
SIO_000628: feature:722310-722437:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:722640-722723:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:723527-723747:1:exon

urn:…
SIO_000300: 25
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urn:…
SIO_000300: 26
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urn:…
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urn:…
SIO_000300: 28
SIO_000628: feature:730227-730361:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:730496-731328:1:exon

LOC115617329
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2489341
gene: LOC115617329
product: EF-hand domain-containing protein D2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 120 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003994571.1
SIO_010081: LOC115617329
so part of: LOC115617329
location: join(706443..706463,706753..706925,707586..707709,708497..708627,710339..710404,710774..710878,711247..711354,712310..712393,712737..712889,713836..714022,715564..715634,715948..716085,716852..716959,717169..717258,717487..717712,718230..718311,718451..718566,719082..719241,719567..719672,721617..721752,722310..722437,722640..722723,723527..723747,724211..724394,725261..725367,729948..730095,730227..730361,730496..731328)
location: region:706443-731328:1
so has part: feature:706443-706463:1:exon
so has part: feature:706753-706925:1:exon
so has part: feature:707586-707709:1:exon
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so has part: feature:710339-710404:1:exon
so has part: feature:710774-710878:1:exon
so has part: feature:711247-711354:1:exon
so has part: feature:712310-712393:1:exon
so has part: feature:712737-712889:1:exon
so has part: feature:713836-714022:1:exon
so has part: feature:715564-715634:1:exon
so has part: feature:715948-716085:1:exon
so has part: feature:716852-716959:1:exon
so has part: feature:717169-717258:1:exon
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so has part: feature:725261-725367:1:exon
so has part: feature:729948-730095:1:exon
so has part: feature:730227-730361:1:exon
so has part: feature:730496-731328:1:exon

position:706443:1
position: 706443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:706443-706463:1:exon

urn:…
SIO_000300: 2
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SIO_000300: 3
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SIO_000300: 11
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urn:…
SIO_000300: 13
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urn:…
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urn:…
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urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
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SIO_000300: 23
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urn:…
SIO_000300: 24
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urn:…
SIO_000300: 25
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urn:…
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SIO_000300: 27
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urn:…
SIO_000300: 28
SIO_000628: feature:730496-731328:1:exon

LOC115617329
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2489341
gene: LOC115617329
product: EF-hand domain-containing protein D2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 120 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003994569.1
SIO_010081: LOC115617329
so part of: LOC115617329
location: join(706470..706613,706710..706925,707586..707709,708497..708627,710339..710404,710774..710878,711247..711354,712310..712393,712737..712889,713836..714022,715564..715634,715948..716085,716852..716959,717169..717258,717487..717712,718230..718311,718451..718566,719082..719241,719567..719672,721617..721752,722310..722437,722640..722723,723527..723747,724211..724394,725261..725367,729948..730095,730227..730361,730496..731328)
location: region:706470-731328:1
so has part: feature:706470-706613:1:exon
so has part: feature:706710-706925:1:exon
so has part: feature:707586-707709:1:exon
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so has part: feature:710774-710878:1:exon
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so has part: feature:712737-712889:1:exon
so has part: feature:713836-714022:1:exon
so has part: feature:715564-715634:1:exon
so has part: feature:715948-716085:1:exon
so has part: feature:716852-716959:1:exon
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so has part: feature:729948-730095:1:exon
so has part: feature:730227-730361:1:exon
so has part: feature:730496-731328:1:exon

position:706470:1
position: 706470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:706470-706613:1:exon

position:706613:1
position: 706613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 28
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LOC115617329
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2489341
gene: LOC115617329
product: EF-hand domain-containing protein D2, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 117 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003994573.1
SIO_010081: LOC115617329
so part of: LOC115617329
location: join(709668..709976,710339..710404,710774..710878,711247..711354,712310..712393,712737..712889,713836..714022,715564..715634,715948..716085,716852..716959,717169..717258,717487..717712,718230..718311,718451..718566,719082..719241,719567..719672,721617..721752,722310..722437,722640..722723,723527..723747,724211..724394,725261..725367,729948..730095,730227..730361,730496..731328)
location: region:709668-731328:1
so has part: feature:709668-709976:1:exon
so has part: feature:710339-710404:1:exon
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so has part: feature:730496-731328:1:exon

position:709668:1
position: 709668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:709668-709976:1:exon

position:709976:1
position: 709976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
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urn:…
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urn:…
SIO_000300: 20
SIO_000628: feature:723527-723747:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:724211-724394:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:725261-725367:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:729948-730095:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:730227-730361:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:730496-731328:1:exon

LOC115617329
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2489341
gene: LOC115617329
product: EF-hand domain-containing protein D2, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 89 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003994575.1
SIO_010081: LOC115617329
so part of: LOC115617329
location: join(717629..717712,718451..718566,719082..719241,719567..719672,721617..721752,722310..722437,722640..722723,723527..723747,724211..724394,725261..725367,729948..730095,730227..730361,730496..731328)
location: region:717629-731328:1
so has part: feature:717629-717712:1:exon
so has part: feature:718451-718566:1:exon
so has part: feature:719082-719241:1:exon
so has part: feature:719567-719672:1:exon
so has part: feature:721617-721752:1:exon
so has part: feature:722310-722437:1:exon
so has part: feature:722640-722723:1:exon
so has part: feature:723527-723747:1:exon
so has part: feature:724211-724394:1:exon
so has part: feature:725261-725367:1:exon
so has part: feature:729948-730095:1:exon
so has part: feature:730227-730361:1:exon
so has part: feature:730496-731328:1:exon

position:717629:1
position: 717629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:717629-717712:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:718451-718566:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:719082-719241:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:719567-719672:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:721617-721752:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:722310-722437:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:722640-722723:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:723527-723747:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:724211-724394:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:725261-725367:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:729948-730095:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:730227-730361:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:730496-731328:1:exon

LOC115617329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115617329
product: EF-hand domain-containing protein D2, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 79 long SRA reads, 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032920326.1
SIO_010081: LOC115617329
subclass of: SO_0000673
so part of: LOC115617329
location: join(722673..722723,723527..723747,724211..724394,725261..725367,729948..730095,730227..730361,730496..731328)
location: region:722673-731328:1
so has part: feature:722673-722723:1:exon
so has part: feature:723527-723747:1:exon
so has part: feature:724211-724394:1:exon
so has part: feature:725261-725367:1:exon
so has part: feature:729948-730095:1:exon
so has part: feature:730227-730361:1:exon
so has part: feature:730496-731328:1:exon

position:722673:1
position: 722673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:722673-722723:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:723527-723747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:724211-724394:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:725261-725367:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:729948-730095:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:730227-730361:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:730496-731328:1:exon

LOC115617329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115617329
product: EF-hand domain-containing protein D2, transcript variant X18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 67 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030507677.1
SIO_010081: LOC115617329
subclass of: SO_0000673
so part of: LOC115617329
location: join(724308..724394,729948..730095,730227..730361,730496..731328)
location: region:724308-731328:1
so has part: feature:724308-724394:1:exon
so has part: feature:729948-730095:1:exon
so has part: feature:730227-730361:1:exon
so has part: feature:730496-731328:1:exon

position:724308:1
position: 724308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724308-724394:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:729948-730095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730227-730361:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730496-731328:1:exon

LOC115617329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115617329
product: EF-hand domain-containing protein D2, transcript variant X17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 69 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030507676.1
SIO_010081: LOC115617329
subclass of: SO_0000673
so part of: LOC115617329
location: join(725134..725367,729948..730095,730227..730361,730496..731328)
location: region:725134-731328:1
so has part: feature:725134-725367:1:exon
so has part: feature:729948-730095:1:exon
so has part: feature:730227-730361:1:exon
so has part: feature:730496-731328:1:exon

position:725134:1
position: 725134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:725134-725367:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:729948-730095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730227-730361:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730496-731328:1:exon

LOC115617329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115617329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EF-hand domain-containing protein D2 isoform X6
translation: MGLWYDAGKDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDLDSKLSFREFLLIFRKAAAGELQEDSGLHALARLSEIDVSTEGVKGAKNFFEAKVQAIHDASRFEEEIKAEQEEKKKQAEELKQRKAAFKELQSTFKQ
SIO_010081: LOC115617329
subclass of: SO_0000673
so part of: LOC115617329
location: join(725357..725367,729948..730095,730227..730361,730496..730630)
location: region:725357-730630:1
so has part: feature:725357-725367:1:exon
so has part: feature:729948-730095:1:exon
so has part: feature:730227-730361:1:exon
so has part: feature:730496-730630:1:exon

XP_030363536.1
type: Protein
SIO_000068: ncbiprotein

position:725357:1
position: 725357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730630:1
position: 730630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:725357-725367:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:729948-730095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730227-730361:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730496-730630:1:exon

LOC115617329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115617329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EF-hand domain-containing protein D2 isoform X6
translation: MGLWYDAGKDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDLDSKLSFREFLLIFRKAAAGELQEDSGLHALARLSEIDVSTEGVKGAKNFFEAKVQAIHDASRFEEEIKAEQEEKKKQAEELKQRKAAFKELQSTFKQ
SIO_010081: LOC115617329
subclass of: SO_0000673
so part of: LOC115617329
location: join(725357..725367,729948..730095,730227..730361,730496..730630)
location: region:725357-730630:1
so has part: feature:725357-725367:1:exon
so has part: feature:729948-730095:1:exon
so has part: feature:730227-730361:1:exon
so has part: feature:730496-730630:1:exon

XP_032776217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:725357-725367:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:729948-730095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730227-730361:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730496-730630:1:exon

LOC115617329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115617329
product: EF-hand domain-containing protein D2, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 104 long SRA reads, 17 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030507674.1
SIO_010081: LOC115617329
subclass of: SO_0000673
so part of: LOC115617329
location: join(727004..727240,729948..730095,730227..730361,730496..731328)
location: region:727004-731328:1
so has part: feature:727004-727240:1:exon
so has part: feature:729948-730095:1:exon
so has part: feature:730227-730361:1:exon
so has part: feature:730496-731328:1:exon

position:727004:1
position: 727004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:727004-727240:1:exon

position:727240:1
position: 727240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:729948-730095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730227-730361:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730496-731328:1:exon

LOC115617329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115617329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EF-hand domain-containing protein D2 isoform X5
translation: MAAAAEELSGRRGRGPEPGPGPGSPVGRAGFEGSPGGGRRVFSPAGEFREFSRRQLRDMERLFRQYDAGKDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDLDSKLSFREFLLIFRKAAAGELQEDSGLHALARLSEIDVSTEGVKGAKNFFEAKVQAIHDASRFEEEIKAEQEEKKKQAEELKQRKAAFKELQSTFKQ
SIO_010081: LOC115617329
subclass of: SO_0000673
so part of: LOC115617329
location: join(727047..727240,729948..730095,730227..730361,730496..730630)
location: region:727047-730630:1
so has part: feature:727047-727240:1:exon
so has part: feature:729948-730095:1:exon
so has part: feature:730227-730361:1:exon
so has part: feature:730496-730630:1:exon

XP_030363534.1
type: Protein
SIO_000068: ncbiprotein

position:727047:1
position: 727047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:727047-727240:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:729948-730095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730227-730361:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730496-730630:1:exon

LOC115617329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115617329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EF-hand domain-containing protein D2 isoform X7
translation: MELKLMMEKLGAPQTHLGLKNMIKEVDEDLDSKLSFREFLLIFRKAAAGELQEDSGLHALARLSEIDVSTEGVKGAKNFFEAKVQAIHDASRFEEEIKAEQEEKKKQAEELKQRKAAFKELQSTFKQ
SIO_010081: LOC115617329
subclass of: SO_0000673
so part of: LOC115617329
location: join(729982..730095,730227..730361,730496..730630)
location: region:729982-730630:1
so has part: feature:729982-730095:1:exon
so has part: feature:730227-730361:1:exon
so has part: feature:730496-730630:1:exon

XP_030363537.1
type: Protein
SIO_000068: ncbiprotein

position:729982:1
position: 729982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:729982-730095:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730227-730361:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730496-730630:1:exon

LOC115617334
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115617334
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 731955..733829
location: region:731955-733829:1
so has part: feature:731955-733829:1:exon
subclass of: SO_0000010

115617334
type: Gene
SIO_000068: ncbigene

position:731955:1
position: 731955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733829:1
position: 733829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:731955-733829:1:exon

LOC115617334
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115617334
product: chymotrypsin-C-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030507683.1
SIO_010081: LOC115617334
subclass of: SO_0000673
so part of: LOC115617334
location: join(731955..731994,732113..732204,732278..732375,732461..732586,732693..732829,732944..733089,733519..733668,733760..733829)
location: region:731955-733829:1
so has part: feature:731955-731994:1:exon
so has part: feature:732113-732204:1:exon
so has part: feature:732278-732375:1:exon
so has part: feature:732461-732586:1:exon
so has part: feature:732693-732829:1:exon
so has part: feature:732944-733089:1:exon
so has part: feature:733519-733668:1:exon
so has part: feature:733760-733829:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:731955-731994:1:exon

position:731994:1
position: 731994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:732113-732204:1:exon

position:732113:1
position: 732113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732204:1
position: 732204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:732278-732375:1:exon

position:732278:1
position: 732278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732375:1
position: 732375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:732461-732586:1:exon

position:732461:1
position: 732461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732586:1
position: 732586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:732693-732829:1:exon

position:732693:1
position: 732693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732829:1
position: 732829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:732944-733089:1:exon

position:732944:1
position: 732944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733089:1
position: 733089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:733519-733668:1:exon

position:733519:1
position: 733519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733668:1
position: 733668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:733760-733829:1:exon

position:733760:1
position: 733760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115617334
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115617334
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chymotrypsin-C-like
translation: MLGALCLVVVLGYAYGYGQPAAAALYSSRVVGGEDAVPHSWPWQISLQYSRNRQWYHTCGGTLIKANWVLTAAHCISSTLTYRVLLGKQVLSEENEPGSVTVSVVKTIVHEKWDSDLIINDIALVKLAEEVQESDTIQAATLPPAGQILENNYPCYVTGWGRLWTNGPLADVLQQALLPVVEYDICSQWSWWGSYVLPTMVCAGGDGVISSCNGDSGGPLNCPQGDDWEVAGIVSFGSSLGCNTLRKPTVFTRVSAYIDWINEKIRSN
SIO_010081: LOC115617334
subclass of: SO_0000673
so part of: LOC115617334
location: join(731955..731994,732113..732204,732278..732375,732461..732586,732693..732829,732944..733089,733519..733668,733760..733777)
location: region:731955-733777:1
so has part: feature:731955-731994:1:exon
so has part: feature:732113-732204:1:exon
so has part: feature:732278-732375:1:exon
so has part: feature:732461-732586:1:exon
so has part: feature:732693-732829:1:exon
so has part: feature:732944-733089:1:exon
so has part: feature:733519-733668:1:exon
so has part: feature:733760-733777:1:exon

XP_030363543.1
type: Protein
SIO_000068: ncbiprotein

position:733777:1
position: 733777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:731955-731994:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:732113-732204:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:732278-732375:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:732461-732586:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:732693-732829:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:732944-733089:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:733519-733668:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:733760-733777:1:exon

CASP9
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: CASP9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(736286..743236)
location: region:736286-743236:-1
so has part: feature:736286-743236:-1:exon
subclass of: SO_0000010

115617332
type: Gene
SIO_000068: ncbigene

position:736286:-1
position: 736286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743236:-1
position: 743236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:736286-743236:-1:exon

CASP9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: CASP9
product: caspase 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 long SRA reads, 10 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030507681.2
SIO_010081: CASP9
subclass of: SO_0000673
so part of: CASP9
location: complement(join(736286..736823,737159..737268,737417..737596,738185..738332,738997..739086,739787..739963,740971..741002,741169..741249,742270..742489,743084..743236))
location: region:736286-743236:-1
so has part: feature:743084-743236:-1:exon
so has part: feature:742270-742489:-1:exon
so has part: feature:741169-741249:-1:exon
so has part: feature:740971-741002:-1:exon
so has part: feature:739787-739963:-1:exon
so has part: feature:738997-739086:-1:exon
so has part: feature:738185-738332:-1:exon
so has part: feature:737417-737596:-1:exon
so has part: feature:737159-737268:-1:exon
so has part: feature:736286-736823:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743084-743236:-1:exon

position:743084:-1
position: 743084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:742270-742489:-1:exon

position:742270:-1
position: 742270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742489:-1
position: 742489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:741169-741249:-1:exon

position:741169:-1
position: 741169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741249:-1
position: 741249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:740971-741002:-1:exon

position:740971:-1
position: 740971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741002:-1
position: 741002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:739787-739963:-1:exon

position:739787:-1
position: 739787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739963:-1
position: 739963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:738997-739086:-1:exon

position:738997:-1
position: 738997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739086:-1
position: 739086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:738185-738332:-1:exon

position:738185:-1
position: 738185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738332:-1
position: 738332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:737417-737596:-1:exon

position:737417:-1
position: 737417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737596:-1
position: 737596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:737159-737268:-1:exon

position:737159:-1
position: 737159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737268:-1
position: 737268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:736286-736823:-1:exon

position:736823:-1
position: 736823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CASP9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: CASP9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caspase-9
translation: MEEAQRRALRRGRARLVAALRVAPLWGPLRERGLFTRHMLEDVQSAGSRGEQARQLVIDLETRGKRAFPVFLSILRDTGQGDLADMLAEECGCPSAPPQLVDLRPVELELPGEEHHENVNLPERLSIPVQAESERPRVPPVPVRGSAVDKWNRDLVYQLRADPCGRCLILNNINFAADSGLCTRRGSDVDCEKLEKRFRALSFDVLTQRDLEAQDMVSELQKLARRDHSALDCCIVVILSHGCQTSHIQFPGGVYGTDGKPIPIEKIVNYFNGSNCPSLRGKPKLFFIQACGGEQRDRGFVVDSSSPGDEAPRGSVESDATPFQAPSGNVDESDAVASLPTPSDILVSYSTFPGFVSWREVSSGSWYVETLDSVLDQYAPSEDLLNMLLRVANAVSAKGKYKQIPGCFNFLRKKFFFKCK
SIO_010081: CASP9
subclass of: SO_0000673
so part of: CASP9
location: complement(join(736731..736823,737159..737268,737417..737596,738185..738332,738997..739086,739787..739963,740971..741002,741169..741249,742270..742489,743084..743215))
location: region:736731-743215:-1
so has part: feature:743084-743215:-1:exon
so has part: feature:742270-742489:-1:exon
so has part: feature:741169-741249:-1:exon
so has part: feature:740971-741002:-1:exon
so has part: feature:739787-739963:-1:exon
so has part: feature:738997-739086:-1:exon
so has part: feature:738185-738332:-1:exon
so has part: feature:737417-737596:-1:exon
so has part: feature:737159-737268:-1:exon
so has part: feature:736731-736823:-1:exon

XP_030363541.1
type: Protein
SIO_000068: ncbiprotein

position:736731:-1
position: 736731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743215:-1
position: 743215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743084-743215:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:742270-742489:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:741169-741249:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:740971-741002:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:739787-739963:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:738997-739086:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:738185-738332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:737417-737596:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:737159-737268:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:736731-736823:-1:exon

DNAJC16
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: DNAJC16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 743283..757424
location: region:743283-757424:1
so has part: feature:743283-757424:1:exon
subclass of: SO_0000010

115617331
type: Gene
SIO_000068: ncbigene

position:743283:1
position: 743283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757424:1
position: 757424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743283-757424:1:exon

DNAJC16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: DNAJC16
product: DnaJ heat shock protein family (Hsp40) member C16, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 94 long SRA reads, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030507678.1
SIO_010081: DNAJC16
subclass of: SO_0000673
so part of: DNAJC16
location: join(743283..743536,744913..744979,745862..746192,747887..748071,749134..749238,749678..749836,750220..750350,750592..750775,751379..751561,751837..751913,752381..752461,752565..752663,752960..753130,753980..757424)
location: region:743283-757424:1
so has part: feature:743283-743536:1:exon
so has part: feature:744913-744979:1:exon
so has part: feature:745862-746192:1:exon
so has part: feature:747887-748071:1:exon
so has part: feature:749134-749238:1:exon
so has part: feature:749678-749836:1:exon
so has part: feature:750220-750350:1:exon
so has part: feature:750592-750775:1:exon
so has part: feature:751379-751561:1:exon
so has part: feature:751837-751913:1:exon
so has part: feature:752381-752461:1:exon
so has part: feature:752565-752663:1:exon
so has part: feature:752960-753130:1:exon
so has part: feature:753980-757424:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743283-743536:1:exon

position:743536:1
position: 743536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:744913-744979:1:exon

position:744913:1
position: 744913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744979:1
position: 744979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:745862-746192:1:exon

position:745862:1
position: 745862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746192:1
position: 746192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:747887-748071:1:exon

position:747887:1
position: 747887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:748071:1
position: 748071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:749134-749238:1:exon

position:749134:1
position: 749134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749238:1
position: 749238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:749678-749836:1:exon

position:749678:1
position: 749678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749836:1
position: 749836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:750220-750350:1:exon

position:750220:1
position: 750220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750350:1
position: 750350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:750592-750775:1:exon

position:750592:1
position: 750592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750775:1
position: 750775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:751379-751561:1:exon

position:751379:1
position: 751379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751561:1
position: 751561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:751837-751913:1:exon

position:751837:1
position: 751837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751913:1
position: 751913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:752381-752461:1:exon

position:752381:1
position: 752381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:752461:1
position: 752461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:752565-752663:1:exon

position:752565:1
position: 752565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:752663:1
position: 752663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:752960-753130:1:exon

position:752960:1
position: 752960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753130:1
position: 753130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:753980-757424:1:exon

position:753980:1
position: 753980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DNAJC16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: DNAJC16
product: DnaJ heat shock protein family (Hsp40) member C16, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 94 long SRA reads, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030507680.1
SIO_010081: DNAJC16
subclass of: SO_0000673
so part of: DNAJC16
location: join(743306..743536,744913..744979,745862..746192,747887..748071,749134..749238,749678..749836,750220..750350,750592..750775,751379..751561,751837..751913,752381..752461,752565..752663,752963..753130,753980..757424)
location: region:743306-757424:1
so has part: feature:743306-743536:1:exon
so has part: feature:744913-744979:1:exon
so has part: feature:745862-746192:1:exon
so has part: feature:747887-748071:1:exon
so has part: feature:749134-749238:1:exon
so has part: feature:749678-749836:1:exon
so has part: feature:750220-750350:1:exon
so has part: feature:750592-750775:1:exon
so has part: feature:751379-751561:1:exon
so has part: feature:751837-751913:1:exon
so has part: feature:752381-752461:1:exon
so has part: feature:752565-752663:1:exon
so has part: feature:752963-753130:1:exon
so has part: feature:753980-757424:1:exon

position:743306:1
position: 743306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743306-743536:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:744913-744979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:745862-746192:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:747887-748071:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:749134-749238:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:749678-749836:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:750220-750350:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:750592-750775:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:751379-751561:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:751837-751913:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:752381-752461:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:752565-752663:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:752963-753130:1:exon

position:752963:1
position: 752963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:753980-757424:1:exon

DNAJC16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: DNAJC16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily C member 16 isoform X1
translation: MEVGRAGLAWAAALLLAALGAQAAAGDFDPYRVLGVGRSSSQADIKKAYKRLAREWHPDKNKDPGAEDKFIQISKAYEILSNEEKRANFDRYGDAGESQGYSQHQHRQFHRFHEGFYFDESFFHFPFNSERRDTSDEKYLLHFSHYINEIVPDSFKKPYLIKITSDWCFSCIHIEPVWKEVAQELEALGAGIGVVHAGYERRLAHHLGAHSTPSLLGLINGKITFFHNAVVRENLRQFVENLLPGNLVEKITDKNYIRFLSNWKKENKPHVLLFDHMPVVPLLYKLTAFAYRDYLSFGYVYVGLQGTEELSSQYNINVYTPTIMIFKEHIDKPADVVQARDMKKQLIDDFLSQNKFLMVARLTNQRLFQELCPVKKSHRQRKHCVVLLTGEGEKFAEAYEAFLAFAVANTKDTLKFVHIYNDRQPDFADALLMDEEKYRGKSAVVILERRNNAGKVAYKTLEEAWQGSKEDNFILLDLLDQLRTDPNLLSSETVLADLNDELAPMFLIRWLYSTLDYLSDCWDSLFHSNWREMMPLLSLLFSALFILFGTVIVQAFSDSSDTRDSPPSEKEETAAKTEKNDASFSKESNSRIPKKGFVEVTELTDINYNSNLVRLRPGHMNVVLILSNSTKTALLQKFALEVYTFTGSSSLHFSFLSLDKHREWLEYLLEFAQDAAPIPNQYDKHFLERDYTGYVLALNGHKKYFCLFKPHRSGDEGASPEDYNSSLHAEARGKSSCSPGSRSIKTKLHKLSFWMERLLEGSLQRFYIPSWPALD
SIO_010081: DNAJC16
subclass of: SO_0000673
so part of: DNAJC16
location: join(743370..743536,744913..744979,745862..746192,747887..748071,749134..749238,749678..749836,750220..750350,750592..750775,751379..751561,751837..751913,752381..752461,752565..752663,752960..753130,753980..754367)
location: region:743370-754367:1
so has part: feature:743370-743536:1:exon
so has part: feature:744913-744979:1:exon
so has part: feature:745862-746192:1:exon
so has part: feature:747887-748071:1:exon
so has part: feature:749134-749238:1:exon
so has part: feature:749678-749836:1:exon
so has part: feature:750220-750350:1:exon
so has part: feature:750592-750775:1:exon
so has part: feature:751379-751561:1:exon
so has part: feature:751837-751913:1:exon
so has part: feature:752381-752461:1:exon
so has part: feature:752565-752663:1:exon
so has part: feature:752960-753130:1:exon
so has part: feature:753980-754367:1:exon

XP_030363538.1
type: Protein
SIO_000068: ncbiprotein

position:743370:1
position: 743370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754367:1
position: 754367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743370-743536:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:744913-744979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:745862-746192:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:747887-748071:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:749134-749238:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:749678-749836:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:750220-750350:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:750592-750775:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:751379-751561:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:751837-751913:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:752381-752461:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:752565-752663:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:752960-753130:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:753980-754367:1:exon

DNAJC16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: DNAJC16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily C member 16 isoform X2
translation: MEVGRAGLAWAAALLLAALGAQAAAGDFDPYRVLGVGRSSSQADIKKAYKRLAREWHPDKNKDPGAEDKFIQISKAYEILSNEEKRANFDRYGDAGESQGYSQHQHRQFHRFHEGFYFDESFFHFPFNSERRDTSDEKYLLHFSHYINEIVPDSFKKPYLIKITSDWCFSCIHIEPVWKEVAQELEALGAGIGVVHAGYERRLAHHLGAHSTPSLLGLINGKITFFHNAVVRENLRQFVENLLPGNLVEKITDKNYIRFLSNWKKENKPHVLLFDHMPVVPLLYKLTAFAYRDYLSFGYVYVGLQGTEELSSQYNINVYTPTIMIFKEHIDKPADVVQARDMKKQLIDDFLSQNKFLMVARLTNQRLFQELCPVKKSHRQRKHCVVLLTGEGEKFAEAYEAFLAFAVANTKDTLKFVHIYNDRQPDFADALLMDEEKYRGKSAVVILERRNNAGKVAYKTLEEAWQGSKEDNFILLDLLDQLRTDPNLLSSETVLADLNDELAPMFLIRWLYSTLDYLSDCWDSLFHSNWREMMPLLSLLFSALFILFGTVIVQAFSDSSDTRDSPPSEKEETAAKTEKNDASFSKESNRIPKKGFVEVTELTDINYNSNLVRLRPGHMNVVLILSNSTKTALLQKFALEVYTFTGSSSLHFSFLSLDKHREWLEYLLEFAQDAAPIPNQYDKHFLERDYTGYVLALNGHKKYFCLFKPHRSGDEGASPEDYNSSLHAEARGKSSCSPGSRSIKTKLHKLSFWMERLLEGSLQRFYIPSWPALD
SIO_010081: DNAJC16
subclass of: SO_0000673
so part of: DNAJC16
location: join(743370..743536,744913..744979,745862..746192,747887..748071,749134..749238,749678..749836,750220..750350,750592..750775,751379..751561,751837..751913,752381..752461,752565..752663,752963..753130,753980..754367)
location: region:743370-754367:1
so has part: feature:743370-743536:1:exon
so has part: feature:744913-744979:1:exon
so has part: feature:745862-746192:1:exon
so has part: feature:747887-748071:1:exon
so has part: feature:749134-749238:1:exon
so has part: feature:749678-749836:1:exon
so has part: feature:750220-750350:1:exon
so has part: feature:750592-750775:1:exon
so has part: feature:751379-751561:1:exon
so has part: feature:751837-751913:1:exon
so has part: feature:752381-752461:1:exon
so has part: feature:752565-752663:1:exon
so has part: feature:752963-753130:1:exon
so has part: feature:753980-754367:1:exon

XP_030363540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:743370-743536:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:744913-744979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:745862-746192:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:747887-748071:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:749134-749238:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:749678-749836:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:750220-750350:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:750592-750775:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:751379-751561:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:751837-751913:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:752381-752461:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:752565-752663:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:752963-753130:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:753980-754367:1:exon

AGMAT
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: AGMAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(757396..761093)
location: region:757396-761093:-1
so has part: feature:757396-761093:-1:exon
subclass of: SO_0000010

115617333
type: Gene
SIO_000068: ncbigene

position:757396:-1
position: 757396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761093:-1
position: 761093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757396-761093:-1:exon

AGMAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: AGMAT
product: agmatinase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 63 long SRA reads, 8 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030507682.1
SIO_010081: AGMAT
subclass of: SO_0000673
so part of: AGMAT
location: complement(join(757396..757835,757953..758037,758556..758735,758952..759147,759254..759302,760375..760577,760668..761093))
location: region:757396-761093:-1
so has part: feature:760668-761093:-1:exon
so has part: feature:760375-760577:-1:exon
so has part: feature:759254-759302:-1:exon
so has part: feature:758952-759147:-1:exon
so has part: feature:758556-758735:-1:exon
so has part: feature:757953-758037:-1:exon
so has part: feature:757396-757835:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:760668-761093:-1:exon

position:760668:-1
position: 760668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:760375-760577:-1:exon

position:760375:-1
position: 760375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760577:-1
position: 760577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:759254-759302:-1:exon

position:759254:-1
position: 759254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759302:-1
position: 759302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:758952-759147:-1:exon

position:758952:-1
position: 758952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759147:-1
position: 759147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:758556-758735:-1:exon

position:758556:-1
position: 758556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758735:-1
position: 758735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:757953-758037:-1:exon

position:757953:-1
position: 757953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758037:-1
position: 758037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:757396-757835:-1:exon

position:757835:-1
position: 757835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AGMAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: AGMAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: agmatinase, mitochondrial
translation: MWGRGSCPWGRMRRLLRAGCSHLLPWAAAQELPVTAAVASSGSSPAVSMGLPRHPARWGSSFNVPPSAEAVARPVGICSMMKLPVQASAAGLDAAFVGVPLDTGTSNRPGARFGPRQIRAESSLLRRFNGSTGAAPFDSLHVADIGDVNVNPYNLPESCRLIRGSYQHIVGSGCVPLTLGGDHTITYPILQAMAERHGPVGLVHVDAHTDTADRALGERIYHGTPFRRCVEEGLLDCGRVIQIGIRGSSYDPDPYKYCREQGFRVVPAEECWMRSLAPLMAEVRQQMRDRPVYISFDIDGLDPAYAPGTGTPEVAGLTPAQALEIIRGCRGLNIVGCDLVEVAPMYDVSGNTALLGANLLFEMLCVLPGVKTM
SIO_010081: AGMAT
subclass of: SO_0000673
so part of: AGMAT
location: complement(join(757762..757835,757953..758037,758556..758735,758952..759147,759254..759302,760375..760577,760668..761002))
location: region:757762-761002:-1
so has part: feature:760668-761002:-1:exon
so has part: feature:760375-760577:-1:exon
so has part: feature:759254-759302:-1:exon
so has part: feature:758952-759147:-1:exon
so has part: feature:758556-758735:-1:exon
so has part: feature:757953-758037:-1:exon
so has part: feature:757762-757835:-1:exon

XP_030363542.1
type: Protein
SIO_000068: ncbiprotein

position:757762:-1
position: 757762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761002:-1
position: 761002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:760668-761002:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:760375-760577:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:759254-759302:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:758952-759147:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:758556-758735:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:757953-758037:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:757762-757835:-1:exon

PINK1
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: PINK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(762406..780272)
location: region:762406-780272:-1
so has part: feature:762406-780272:-1:exon
subclass of: SO_0000010

115617276
type: Gene
SIO_000068: ncbigene

position:762406:-1
position: 762406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780272:-1
position: 780272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:762406-780272:-1:exon

PINK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: PINK1
product: PTEN induced kinase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 272 long SRA reads, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030507564.1
SIO_010081: PINK1
subclass of: SO_0000673
so part of: PINK1
location: complement(join(762406..763590,764253..764489,772873..773000,774139..774302,775239..775421,777214..777317,778260..778547,779901..780272))
location: region:762406-780272:-1
so has part: feature:779901-780272:-1:exon
so has part: feature:778260-778547:-1:exon
so has part: feature:777214-777317:-1:exon
so has part: feature:775239-775421:-1:exon
so has part: feature:774139-774302:-1:exon
so has part: feature:772873-773000:-1:exon
so has part: feature:764253-764489:-1:exon
so has part: feature:762406-763590:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:779901-780272:-1:exon

position:779901:-1
position: 779901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:778260-778547:-1:exon

position:778260:-1
position: 778260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778547:-1
position: 778547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:777214-777317:-1:exon

position:777214:-1
position: 777214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777317:-1
position: 777317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:775239-775421:-1:exon

position:775239:-1
position: 775239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775421:-1
position: 775421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:774139-774302:-1:exon

position:774139:-1
position: 774139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:774302:-1
position: 774302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:772873-773000:-1:exon

position:772873:-1
position: 772873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:773000:-1
position: 773000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:764253-764489:-1:exon

position:764253:-1
position: 764253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:764489:-1
position: 764489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:762406-763590:-1:exon

position:763590:-1
position: 763590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PINK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: PINK1
product: PTEN induced kinase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 240 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030507565.1
SIO_010081: PINK1
subclass of: SO_0000673
so part of: PINK1
location: complement(join(762406..763590,764253..764489,772873..773000,774139..774302,775239..775421,777214..777317,778260..778547,779779..779850))
location: region:762406-779850:-1
so has part: feature:779779-779850:-1:exon
so has part: feature:778260-778547:-1:exon
so has part: feature:777214-777317:-1:exon
so has part: feature:775239-775421:-1:exon
so has part: feature:774139-774302:-1:exon
so has part: feature:772873-773000:-1:exon
so has part: feature:764253-764489:-1:exon
so has part: feature:762406-763590:-1:exon

position:779850:-1
position: 779850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:779779-779850:-1:exon

position:779779:-1
position: 779779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:778260-778547:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:777214-777317:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:775239-775421:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:774139-774302:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:772873-773000:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:764253-764489:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:762406-763590:-1:exon

PINK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: PINK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PINK1, mitochondrial isoform X1
translation: MAVRLLLARALRLFPRCRLRCAPRPDPRPEPRSGPSPSPSPSPSPCPWRPWLAWLPAARRLLLPGPASGLAAVARRGRGGVCLALAMALGLVEPRLEEQRRAEAACRHIQTVFVGKNKPQKDPLSSFRWQGFKLEEYLIGQPIGKGCSAAVYEAAIPFSPRGRGCGESSHVAGHGPAPQAAEEEPVVKHQPKEAFPLAIKMMWNISAGSSSEAILDAMGRELVPATGIALAGEYGAVPGRRKPILGRKKLQPHPNIIQVIRAFTSSVPLLPGAFADYPDVLPLSLNPRGIGHSRTLFLVMKNYPCTLRQYLQESSPDVFLSTMMILQLLEGVDHLVRHGIAHRDLKSDNILVEFDSSGCPWLVITDFGCCLADENIGLRLPFTSSYVDRGGNGCLMAPEVITASPGPGTVINYSKSDAWAVGAIAYEILGLANPFYGHGASALESRSYHEDQLPSLPDRVPLEVKQVIKMLLRRDPNKRLSARVAANVLHLSLWGESILATQALKPDQMVTWLLCQSAATLLTEGLVDRSQVETKMKMCFLANLDYEDLWAAIFLLLAWRSRSG
SIO_010081: PINK1
subclass of: SO_0000673
so part of: PINK1
location: complement(join(763330..763590,764253..764489,772873..773000,774139..774302,775239..775421,777214..777317,778260..778547,779901..780230))
location: region:763330-780230:-1
so has part: feature:779901-780230:-1:exon
so has part: feature:778260-778547:-1:exon
so has part: feature:777214-777317:-1:exon
so has part: feature:775239-775421:-1:exon
so has part: feature:774139-774302:-1:exon
so has part: feature:772873-773000:-1:exon
so has part: feature:764253-764489:-1:exon
so has part: feature:763330-763590:-1:exon

XP_030363424.1
type: Protein
SIO_000068: ncbiprotein

position:763330:-1
position: 763330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780230:-1
position: 780230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:779901-780230:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:778260-778547:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:777214-777317:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:775239-775421:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:774139-774302:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:772873-773000:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:764253-764489:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:763330-763590:-1:exon

PINK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: PINK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PINK1, mitochondrial isoform X2
translation: MWGQCWGSPTDTPHGGQCGTVFVGKNKPQKDPLSSFRWQGFKLEEYLIGQPIGKGCSAAVYEAAIPFSPRGRGCGESSHVAGHGPAPQAAEEEPVVKHQPKEAFPLAIKMMWNISAGSSSEAILDAMGRELVPATGIALAGEYGAVPGRRKPILGRKKLQPHPNIIQVIRAFTSSVPLLPGAFADYPDVLPLSLNPRGIGHSRTLFLVMKNYPCTLRQYLQESSPDVFLSTMMILQLLEGVDHLVRHGIAHRDLKSDNILVEFDSSGCPWLVITDFGCCLADENIGLRLPFTSSYVDRGGNGCLMAPEVITASPGPGTVINYSKSDAWAVGAIAYEILGLANPFYGHGASALESRSYHEDQLPSLPDRVPLEVKQVIKMLLRRDPNKRLSARVAANVLHLSLWGESILATQALKPDQMVTWLLCQSAATLLTEGLVDRSQVETKMKMCFLANLDYEDLWAAIFLLLAWRSRSG
SIO_010081: PINK1
subclass of: SO_0000673
so part of: PINK1
location: complement(join(763330..763590,764253..764489,772873..773000,774139..774302,775239..775421,777214..777317,778260..778547,779779..779835))
location: region:763330-779835:-1
so has part: feature:779779-779835:-1:exon
so has part: feature:778260-778547:-1:exon
so has part: feature:777214-777317:-1:exon
so has part: feature:775239-775421:-1:exon
so has part: feature:774139-774302:-1:exon
so has part: feature:772873-773000:-1:exon
so has part: feature:764253-764489:-1:exon
so has part: feature:763330-763590:-1:exon

XP_030363425.1
type: Protein
SIO_000068: ncbiprotein

position:779835:-1
position: 779835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:779779-779835:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:778260-778547:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:777214-777317:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:775239-775421:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:774139-774302:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:772873-773000:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:764253-764489:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:763330-763590:-1:exon

CDA
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: CDA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(782272..784899)
location: region:782272-784899:-1
so has part: feature:782272-784899:-1:exon
subclass of: SO_0000010

115617277
type: Gene
SIO_000068: ncbigene

position:782272:-1
position: 782272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:784899:-1
position: 784899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:782272-784899:-1:exon

CDA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: CDA
product: cytidine deaminase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030507566.1
SIO_010081: CDA
subclass of: SO_0000673
so part of: CDA
location: complement(join(782272..783063,783819..783876,784121..784232,784539..784899))
location: region:782272-784899:-1
so has part: feature:784539-784899:-1:exon
so has part: feature:784121-784232:-1:exon
so has part: feature:783819-783876:-1:exon
so has part: feature:782272-783063:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:784539-784899:-1:exon

position:784539:-1
position: 784539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:784121-784232:-1:exon

position:784121:-1
position: 784121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:784232:-1
position: 784232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:783819-783876:-1:exon

position:783819:-1
position: 783819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783876:-1
position: 783876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:782272-783063:-1:exon

position:783063:-1
position: 783063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: CDA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytidine deaminase
translation: MEGDRQHPAPAAPPGEHLQLLLRRSQEAKNCAYCPYSRFPVGAALLTASGEIFSGCNVENACYSLGVCAERTAIQKAISEGHTSFRAMAITSDMRDTFIVPCGACRQVMREFGTDWDVYLTKADGSYIVKRLEELLPLPFGPEDLKKV
SIO_010081: CDA
subclass of: SO_0000673
so part of: CDA
location: complement(join(782950..783063,783819..783876,784121..784232,784539..784701))
location: region:782950-784701:-1
so has part: feature:784539-784701:-1:exon
so has part: feature:784121-784232:-1:exon
so has part: feature:783819-783876:-1:exon
so has part: feature:782950-783063:-1:exon

XP_030363426.1
type: Protein
SIO_000068: ncbiprotein

position:782950:-1
position: 782950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:784701:-1
position: 784701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:784539-784701:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:784121-784232:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:783819-783876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:782950-783063:-1:exon

FAM43B
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: FAM43B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 786488..788091
location: region:786488-788091:1
so has part: feature:786488-788091:1:exon
subclass of: SO_0000010

115617278
type: Gene
SIO_000068: ncbigene

position:786488:1
position: 786488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788091:1
position: 788091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:786488-788091:1:exon

FAM43B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: FAM43B
product: family with sequence similarity 43 member B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 90 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030507567.1
SIO_010081: FAM43B
subclass of: SO_0000673
so part of: FAM43B
location: 786488..788091
location: region:786488-788091:1
so has part: feature:786488-788091:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:786488-788091:1:exon

FAM43B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: FAM43B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM43B
translation: MLPWRRSKFVLVENERKCKSKSLGPGLSYAALLAGFLRSCPDLLPECPLERLGSVFRGKRQKVELNKEDPTYTVRYLGNAVTLHAKGEGCTEEAVGKIWAKSDAGASGVKMKLTLGPQGIRMSPCEKGARRPGHAYLLHRITYCAADRRHPKVFAWVYRHQVKNKAVVLRCHAVLVSKADKARAMALLLYQTSASAFNEFKRLKRQNDFRHVQQQLLGDAIVPLVPLRRLLNAKCPYRPPAERARCAPRLSSILEEEEDEAFGSGAPRGDGAERAAVLRLAREMRGCSLRGPRAMAC
SIO_010081: FAM43B
subclass of: SO_0000673
so part of: FAM43B
location: 786993..787886
location: region:786993-787886:1
so has part: feature:786993-787886:1:exon

XP_030363427.1
type: Protein
SIO_000068: ncbiprotein

position:786993:1
position: 786993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787886:1
position: 787886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:786993-787886:1:exon

MUL1
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: MUL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 789162..791922
location: region:789162-791922:1
so has part: feature:789162-791922:1:exon
subclass of: SO_0000010

115617279
type: Gene
SIO_000068: ncbigene

position:789162:1
position: 789162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:791922:1
position: 791922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:789162-791922:1:exon

MUL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: MUL1
product: mitochondrial E3 ubiquitin protein ligase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 82 long SRA reads, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030507568.1
SIO_010081: MUL1
subclass of: SO_0000673
so part of: MUL1
location: join(789162..789310,789407..789494,789835..789955,790649..791922)
location: region:789162-791922:1
so has part: feature:789162-789310:1:exon
so has part: feature:789407-789494:1:exon
so has part: feature:789835-789955:1:exon
so has part: feature:790649-791922:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:789162-789310:1:exon

position:789310:1
position: 789310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:789407-789494:1:exon

position:789407:1
position: 789407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789494:1
position: 789494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:789835-789955:1:exon

position:789835:1
position: 789835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789955:1
position: 789955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:790649-791922:1:exon

position:790649:1
position: 790649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MUL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: MUL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial ubiquitin ligase activator of NFKB 1
translation: MEGGGRPSLGQAALLAASTALTALVCSVYRHRARVARGLEGARRVRLDGDLRAVLLEAPGRCVPYAVIEGVVQSVKETLSSQFVENCKGVVQRLTLQEHKMVWNRTTHLWNDYEKIIHQRTNTTPFDLVPAEDGAAGVTVRVMKPLDAAELSLETVYEKFHPSVQSFTDVIGHYISGERPKGIQETEQMLKVGTALTGVGELVLDNATIKLQPPKQGMPYYLSALDFDSLLHRQESNVRFWKILTVVFGFATCAILFVILRKQYQHHRERQHLRQMQDEFRQAQERLMREMNVEGAETLKNACVICLSNTKSCVFLECGHVCSCSECYQALPEPRRCPICRQPIARVVPLYNS
SIO_010081: MUL1
subclass of: SO_0000673
so part of: MUL1
location: join(789191..789310,789407..789494,789835..789955,790649..791381)
location: region:789191-791381:1
so has part: feature:789191-789310:1:exon
so has part: feature:789407-789494:1:exon
so has part: feature:789835-789955:1:exon
so has part: feature:790649-791381:1:exon

XP_030363428.1
type: Protein
SIO_000068: ncbiprotein

position:789191:1
position: 789191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:791381:1
position: 791381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:789191-789310:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:789407-789494:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:789835-789955:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:790649-791381:1:exon

CAMK2N1
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: CAMK2N1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 793644..796111
location: region:793644-796111:1
so has part: feature:793644-796111:1:exon
subclass of: SO_0000010

115617280
type: Gene
SIO_000068: ncbigene

position:793644:1
position: 793644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796111:1
position: 796111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:793644-796111:1:exon

CAMK2N1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: CAMK2N1
product: calcium/calmodulin dependent protein kinase II inhibitor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 1099 long SRA reads, 8 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030507570.1
SIO_010081: CAMK2N1
subclass of: SO_0000673
so part of: CAMK2N1
location: join(793644..794027,794740..796111)
location: region:793644-796111:1
so has part: feature:793644-794027:1:exon
so has part: feature:794740-796111:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:793644-794027:1:exon

position:794027:1
position: 794027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:794740-796111:1:exon

position:794740:1
position: 794740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CAMK2N1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: CAMK2N1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium/calmodulin-dependent protein kinase II inhibitor 1
translation: MSEGPPYGEGQLAGDAAVGQLPFPVRLRGPDGLLAGGQGKRPPKLGQIGRSKRVVIEDDRIDDVLQNLSEKAPPGV
SIO_010081: CAMK2N1
subclass of: SO_0000673
so part of: CAMK2N1
location: join(793868..794027,794740..794810)
location: region:793868-794810:1
so has part: feature:793868-794027:1:exon
so has part: feature:794740-794810:1:exon

XP_030363430.1
type: Protein
SIO_000068: ncbiprotein

position:793868:1
position: 793868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:794810:1
position: 794810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:793868-794027:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:794740-794810:1:exon

VWA5B1
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: VWA5B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(806833..837971)
location: region:806833-837971:-1
so has part: feature:806833-837971:-1:exon
subclass of: SO_0000010

115617281
type: Gene
SIO_000068: ncbigene

position:806833:-1
position: 806833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837971:-1
position: 837971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:806833-837971:-1:exon

VWA5B1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: VWA5B1
product: von Willebrand factor A domain containing 5B1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030507572.1
SIO_010081: VWA5B1
subclass of: SO_0000673
so part of: VWA5B1
location: complement(join(806833..810138,810328..810451,810613..810682,810914..810988,811475..811600,811888..812025,812594..812911,813060..813258,815511..815698,816668..816848,817075..817260,818673..818787,820050..820252,820325..820435,823343..823519,826010..826134,826786..826917,827191..827333,827850..828072,828395..828556,829001..829183,837922..837971))
location: region:806833-837971:-1
so has part: feature:837922-837971:-1:exon
so has part: feature:829001-829183:-1:exon
so has part: feature:828395-828556:-1:exon
so has part: feature:827850-828072:-1:exon
so has part: feature:827191-827333:-1:exon
so has part: feature:826786-826917:-1:exon
so has part: feature:826010-826134:-1:exon
so has part: feature:823343-823519:-1:exon
so has part: feature:820325-820435:-1:exon
so has part: feature:820050-820252:-1:exon
so has part: feature:818673-818787:-1:exon
so has part: feature:817075-817260:-1:exon
so has part: feature:816668-816848:-1:exon
so has part: feature:815511-815698:-1:exon
so has part: feature:813060-813258:-1:exon
so has part: feature:812594-812911:-1:exon
so has part: feature:811888-812025:-1:exon
so has part: feature:811475-811600:-1:exon
so has part: feature:810914-810988:-1:exon
so has part: feature:810613-810682:-1:exon
so has part: feature:810328-810451:-1:exon
so has part: feature:806833-810138:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:837922-837971:-1:exon

position:837922:-1
position: 837922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:829001-829183:-1:exon

position:829001:-1
position: 829001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829183:-1
position: 829183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:828395-828556:-1:exon

position:828395:-1
position: 828395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:828556:-1
position: 828556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:827850-828072:-1:exon

position:827850:-1
position: 827850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:828072:-1
position: 828072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:827191-827333:-1:exon

position:827191:-1
position: 827191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827333:-1
position: 827333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:826786-826917:-1:exon

position:826786:-1
position: 826786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:826917:-1
position: 826917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:826010-826134:-1:exon

position:826010:-1
position: 826010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:826134:-1
position: 826134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:823343-823519:-1:exon

position:823343:-1
position: 823343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823519:-1
position: 823519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:820325-820435:-1:exon

position:820325:-1
position: 820325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820435:-1
position: 820435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:820050-820252:-1:exon

position:820050:-1
position: 820050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820252:-1
position: 820252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:818673-818787:-1:exon

position:818673:-1
position: 818673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818787:-1
position: 818787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:817075-817260:-1:exon

position:817075:-1
position: 817075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817260:-1
position: 817260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:816668-816848:-1:exon

position:816668:-1
position: 816668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816848:-1
position: 816848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:815511-815698:-1:exon

position:815511:-1
position: 815511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815698:-1
position: 815698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:813060-813258:-1:exon

position:813060:-1
position: 813060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:813258:-1
position: 813258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:812594-812911:-1:exon

position:812594:-1
position: 812594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812911:-1
position: 812911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:811888-812025:-1:exon

position:811888:-1
position: 811888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812025:-1
position: 812025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:811475-811600:-1:exon

position:811475:-1
position: 811475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811600:-1
position: 811600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:810914-810988:-1:exon

position:810914:-1
position: 810914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:810988:-1
position: 810988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:810613-810682:-1:exon

position:810613:-1
position: 810613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:810682:-1
position: 810682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:810328-810451:-1:exon

position:810328:-1
position: 810328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:810451:-1
position: 810451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:806833-810138:-1:exon

position:810138:-1
position: 810138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VWA5B1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: VWA5B1
product: von Willebrand factor A domain containing 5B1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030507574.1
SIO_010081: VWA5B1
subclass of: SO_0000673
so part of: VWA5B1
location: complement(join(806833..810138,810328..810451,810613..810682,811475..811600,811888..812025,812594..812911,813060..813258,815511..815698,816668..816848,817075..817260,818673..818787,820050..820252,820325..820435,823343..823519,826010..826134,826786..826917,827191..827333,827850..828072,828395..828556,829001..829183,834606..834771))
location: region:806833-834771:-1
so has part: feature:834606-834771:-1:exon
so has part: feature:829001-829183:-1:exon
so has part: feature:828395-828556:-1:exon
so has part: feature:827850-828072:-1:exon
so has part: feature:827191-827333:-1:exon
so has part: feature:826786-826917:-1:exon
so has part: feature:826010-826134:-1:exon
so has part: feature:823343-823519:-1:exon
so has part: feature:820325-820435:-1:exon
so has part: feature:820050-820252:-1:exon
so has part: feature:818673-818787:-1:exon
so has part: feature:817075-817260:-1:exon
so has part: feature:816668-816848:-1:exon
so has part: feature:815511-815698:-1:exon
so has part: feature:813060-813258:-1:exon
so has part: feature:812594-812911:-1:exon
so has part: feature:811888-812025:-1:exon
so has part: feature:811475-811600:-1:exon
so has part: feature:810613-810682:-1:exon
so has part: feature:810328-810451:-1:exon
so has part: feature:806833-810138:-1:exon

position:834771:-1
position: 834771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:834606-834771:-1:exon

position:834606:-1
position: 834606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:829001-829183:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:828395-828556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:827850-828072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:827191-827333:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:826786-826917:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:826010-826134:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:823343-823519:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:820325-820435:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:820050-820252:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:818673-818787:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:817075-817260:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:816668-816848:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:815511-815698:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:813060-813258:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:812594-812911:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:811888-812025:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:811475-811600:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:810613-810682:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:810328-810451:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:806833-810138:-1:exon

VWA5B1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: VWA5B1
product: von Willebrand factor A domain containing 5B1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030507571.1
SIO_010081: VWA5B1
subclass of: SO_0000673
so part of: VWA5B1
location: complement(join(806833..810138,810328..810451,810613..810682,810914..810988,811475..811600,811888..812025,812594..812911,813060..813258,815511..815698,816668..816848,817075..817260,818673..818787,820050..820252,820325..820435,823343..823519,826010..826134,826786..826917,827191..827333,827850..828072,828395..828556,829001..829183,834606..834771))
location: region:806833-834771:-1
so has part: feature:834606-834771:-1:exon
so has part: feature:829001-829183:-1:exon
so has part: feature:828395-828556:-1:exon
so has part: feature:827850-828072:-1:exon
so has part: feature:827191-827333:-1:exon
so has part: feature:826786-826917:-1:exon
so has part: feature:826010-826134:-1:exon
so has part: feature:823343-823519:-1:exon
so has part: feature:820325-820435:-1:exon
so has part: feature:820050-820252:-1:exon
so has part: feature:818673-818787:-1:exon
so has part: feature:817075-817260:-1:exon
so has part: feature:816668-816848:-1:exon
so has part: feature:815511-815698:-1:exon
so has part: feature:813060-813258:-1:exon
so has part: feature:812594-812911:-1:exon
so has part: feature:811888-812025:-1:exon
so has part: feature:811475-811600:-1:exon
so has part: feature:810914-810988:-1:exon
so has part: feature:810613-810682:-1:exon
so has part: feature:810328-810451:-1:exon
so has part: feature:806833-810138:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:834606-834771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:829001-829183:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:828395-828556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:827850-828072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:827191-827333:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:826786-826917:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:826010-826134:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:823343-823519:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:820325-820435:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:820050-820252:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:818673-818787:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:817075-817260:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:816668-816848:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:815511-815698:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:813060-813258:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:812594-812911:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:811888-812025:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:811475-811600:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:810914-810988:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:810613-810682:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:810328-810451:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:806833-810138:-1:exon

VWA5B1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: VWA5B1
product: von Willebrand factor A domain containing 5B1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030507573.1
SIO_010081: VWA5B1
subclass of: SO_0000673
so part of: VWA5B1
location: complement(join(806833..810138,810328..810451,810613..810682,810914..810988,811475..811600,811888..812025,812594..812911,813060..813258,815511..815698,816668..816848,817075..817260,818673..818787,820050..820252,820325..820435,823343..823519,826010..826134,826786..826917,827191..827333,827850..828072,828395..828556,829001..829183,829303..829502))
location: region:806833-829502:-1
so has part: feature:829303-829502:-1:exon
so has part: feature:829001-829183:-1:exon
so has part: feature:828395-828556:-1:exon
so has part: feature:827850-828072:-1:exon
so has part: feature:827191-827333:-1:exon
so has part: feature:826786-826917:-1:exon
so has part: feature:826010-826134:-1:exon
so has part: feature:823343-823519:-1:exon
so has part: feature:820325-820435:-1:exon
so has part: feature:820050-820252:-1:exon
so has part: feature:818673-818787:-1:exon
so has part: feature:817075-817260:-1:exon
so has part: feature:816668-816848:-1:exon
so has part: feature:815511-815698:-1:exon
so has part: feature:813060-813258:-1:exon
so has part: feature:812594-812911:-1:exon
so has part: feature:811888-812025:-1:exon
so has part: feature:811475-811600:-1:exon
so has part: feature:810914-810988:-1:exon
so has part: feature:810613-810682:-1:exon
so has part: feature:810328-810451:-1:exon
so has part: feature:806833-810138:-1:exon

position:829502:-1
position: 829502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:829303-829502:-1:exon

position:829303:-1
position: 829303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:829001-829183:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:828395-828556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:827850-828072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:827191-827333:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:826786-826917:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:826010-826134:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:823343-823519:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:820325-820435:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:820050-820252:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:818673-818787:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:817075-817260:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:816668-816848:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:815511-815698:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:813060-813258:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:812594-812911:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:811888-812025:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:811475-811600:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:810914-810988:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:810613-810682:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:810328-810451:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:806833-810138:-1:exon

VWA5B1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: VWA5B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: von Willebrand factor A domain-containing protein 5B1 isoform X2
translation: MPGLINRATRCPLPLTASEVTSCVSGYAFGMTALLTYRNPEPQALEGLFVFPLDECTTVVGFEAAVSRRAVTVQIKDKAKIDDTYFGSCSFPDGRARDGSGRILMDEDMERIAFVANLGTVPPLESVSIFISTSSELQTLPSGAVRVLLPAVCVPRVPQPSLGNASSIPSLQLRTDKHYCGPGSPEPGSRFCLAQLLDAEATNPFEYEFSFHLEIRGPCLLAGVESPTHEIRADADPCARSAKSIVITLANKHTFDRPVEILIHPSEPHMPHILMEEGDMTPAEYERHLKGKNDFIKGTKKDPSAEKKMEIIRKRLNKDIPHHPVIMLSFCPDLATVQPGLRKAQGEFIFLIDRSRSMSGVNINCVKDALLVILKSLMPACLFNVIGFGSTFKTLFPASQTYCEESLAIACESIKRIRADMGSTNILSPLKWVIRQPIHRGHPRLLFLLTNGAISNTGKVLELLRNHSCSTRCYSFGMGPSACRRLVRGLAAVSRGSAEFLAEGERLQPKMIKSLKKAMAPVLSDVSVEWVFPESTEVLVSPISTSCLFPGDRLVGYGIVCDTSSYISNPRSDKRRRYSMMRSQESGSSVFFHSQEEGAGMESWNHSRDPEGCCPDRLVVGREPGGESDTDTGMDVKASSRRRAYSTPHAADHEPCRKVPTASDPDTALGRNPLRKTHLQDLQQVSPEPWQGDLQPFTANPTRMLGARRPSLLHRGCMSFCHDAEAPPVLDGLQQAARGLGPLDASRRLRSSSDSRSPGDLESAQHPSFTFETETSSDWEPQDLDFSAGCGSPRSPRTLCKAVVKGLRMNEPVQWEVTFDICPLFRERESREDGDTDPWSETFHHLAAKSVTRDFEHLAERECEIEHGSGRRYQVNAVHTSKACNVISKYTAFVPVDLSTNTYLPTIVEYTHTGAASKQGSQRSLRSGNRRHRGFSPGRPHSACGQNGDDGFYSMRPLQSLSASSAQAQRSIESLFAARLTLNKTRLLMRAAKGFMSKSPSRASEGSSEGDNENIDYLPLVSLQLACGAFLMNTAFCDAVNIPMEKLKRTSPFACHRLALSPSSSYSTKASPSTEHKRLSSNQQLLVPNGHGKSPTTTDTALGAEDAGRLRHSSGSAVESISRALRAEKELSPPAITIRRFSSPESTAGSAGWQGSSSRGSGTDSSEVQALLFDMELQQQTEPEGMLWATAVALAWLENSSASYFIEWELVAAKASLWLSQQDFPEGYSLATVKAAAQQLFVLLRHWDENLEFNLLCYNPSSV
SIO_010081: VWA5B1
subclass of: SO_0000673
so part of: VWA5B1
location: complement(join(809407..810138,810328..810451,810613..810682,811475..811600,811888..812025,812594..812911,813060..813258,815511..815698,816668..816848,817075..817260,818673..818787,820050..820252,820325..820435,823343..823519,826010..826134,826786..826917,827191..827333,827850..828072,828395..828556,829001..829139))
location: region:809407-829139:-1
so has part: feature:829001-829139:-1:exon
so has part: feature:828395-828556:-1:exon
so has part: feature:827850-828072:-1:exon
so has part: feature:827191-827333:-1:exon
so has part: feature:826786-826917:-1:exon
so has part: feature:826010-826134:-1:exon
so has part: feature:823343-823519:-1:exon
so has part: feature:820325-820435:-1:exon
so has part: feature:820050-820252:-1:exon
so has part: feature:818673-818787:-1:exon
so has part: feature:817075-817260:-1:exon
so has part: feature:816668-816848:-1:exon
so has part: feature:815511-815698:-1:exon
so has part: feature:813060-813258:-1:exon
so has part: feature:812594-812911:-1:exon
so has part: feature:811888-812025:-1:exon
so has part: feature:811475-811600:-1:exon
so has part: feature:810613-810682:-1:exon
so has part: feature:810328-810451:-1:exon
so has part: feature:809407-810138:-1:exon

XP_030363434.1
type: Protein
SIO_000068: ncbiprotein

position:809407:-1
position: 809407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829139:-1
position: 829139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:829001-829139:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:828395-828556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:827850-828072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:827191-827333:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:826786-826917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:826010-826134:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:823343-823519:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:820325-820435:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:820050-820252:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:818673-818787:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:817075-817260:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:816668-816848:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:815511-815698:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:813060-813258:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:812594-812911:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:811888-812025:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:811475-811600:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:810613-810682:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:810328-810451:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:809407-810138:-1:exon

VWA5B1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: VWA5B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: von Willebrand factor A domain-containing protein 5B1 isoform X1
translation: MPGLINRATRCPLPLTASEVTSCVSGYAFGMTALLTYRNPEPQALEGLFVFPLDECTTVVGFEAAVSRRAVTVQIKDKAKIDDTYFGSCSFPDGRARDGSGRILMDEDMERIAFVANLGTVPPLESVSIFISTSSELQTLPSGAVRVLLPAVCVPRVPQPSLGNASSIPSLQLRTDKHYCGPGSPEPGSRFCLAQLLDAEATNPFEYEFSFHLEIRGPCLLAGVESPTHEIRADADPCARSAKSIVITLANKHTFDRPVEILIHPSEPHMPHILMEEGDMTPAEYERHLKGKNDFIKGTKKDPSAEKKMEIIRKRLNKDIPHHPVIMLSFCPDLATVQPGLRKAQGEFIFLIDRSRSMSGVNINCVKDALLVILKSLMPACLFNVIGFGSTFKTLFPASQTYCEESLAIACESIKRIRADMGSTNILSPLKWVIRQPIHRGHPRLLFLLTNGAISNTGKVLELLRNHSCSTRCYSFGMGPSACRRLVRGLAAVSRGSAEFLAEGERLQPKMIKSLKKAMAPVLSDVSVEWVFPESTEVLVSPISTSCLFPGDRLVGYGIVCDTSSYISNPRSDKRRRYSMMRSQESGSSVFFHSQEEGAGMESWNHSRDPEGCCPDRLVVGREPGGESDTDTGMDVKASSRRRAYSTPHAADHEPCRKVPTASDPDTALGRNPLRKTHLQDLQQVSPEPWQGDLQPFTANPTRMLGARRPSLLHRGCMSFCHDAEAPPVLDGLQQAARGLGPLDASRRLRSSSDSRSPGDLESAQHPSFTFETETSSDWEPQDLDFSAGCGSPRSPRTLCKAVVKGLRMNEPVQWEVTFDICPLFRERESREDGDTDPWSETFHHLAAKSVTRDFEHLAERECEIEHGSGRRYQVNAVHTSKACNVISKYTAFVPVDLSTNTYLPTIVEYTHTGAASKQGSQRSLRSGNRRHRGFSPGRPHSACGQNGDDGFYSMSAEESSLSPCSTPSLSAWERCGLPEGPLQSLSASSAQAQRSIESLFAARLTLNKTRLLMRAAKGFMSKSPSRASEGSSEGDNENIDYLPLVSLQLACGAFLMNTAFCDAVNIPMEKLKRTSPFACHRLALSPSSSYSTKASPSTEHKRLSSNQQLLVPNGHGKSPTTTDTALGAEDAGRLRHSSGSAVESISRALRAEKELSPPAITIRRFSSPESTAGSAGWQGSSSRGSGTDSSEVQALLFDMELQQQTEPEGMLWATAVALAWLENSSASYFIEWELVAAKASLWLSQQDFPEGYSLATVKAAAQQLFVLLRHWDENLEFNLLCYNPSSV
SIO_010081: VWA5B1
subclass of: SO_0000673
so part of: VWA5B1
location: complement(join(809407..810138,810328..810451,810613..810682,810914..810988,811475..811600,811888..812025,812594..812911,813060..813258,815511..815698,816668..816848,817075..817260,818673..818787,820050..820252,820325..820435,823343..823519,826010..826134,826786..826917,827191..827333,827850..828072,828395..828556,829001..829139))
location: region:809407-829139:-1
so has part: feature:829001-829139:-1:exon
so has part: feature:828395-828556:-1:exon
so has part: feature:827850-828072:-1:exon
so has part: feature:827191-827333:-1:exon
so has part: feature:826786-826917:-1:exon
so has part: feature:826010-826134:-1:exon
so has part: feature:823343-823519:-1:exon
so has part: feature:820325-820435:-1:exon
so has part: feature:820050-820252:-1:exon
so has part: feature:818673-818787:-1:exon
so has part: feature:817075-817260:-1:exon
so has part: feature:816668-816848:-1:exon
so has part: feature:815511-815698:-1:exon
so has part: feature:813060-813258:-1:exon
so has part: feature:812594-812911:-1:exon
so has part: feature:811888-812025:-1:exon
so has part: feature:811475-811600:-1:exon
so has part: feature:810914-810988:-1:exon
so has part: feature:810613-810682:-1:exon
so has part: feature:810328-810451:-1:exon
so has part: feature:809407-810138:-1:exon

XP_030363431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:829001-829139:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:828395-828556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:827850-828072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:827191-827333:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:826786-826917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:826010-826134:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:823343-823519:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:820325-820435:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:820050-820252:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:818673-818787:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:817075-817260:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:816668-816848:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:815511-815698:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:813060-813258:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:812594-812911:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:811888-812025:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:811475-811600:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:810914-810988:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:810613-810682:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:810328-810451:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:809407-810138:-1:exon

VWA5B1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: VWA5B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: von Willebrand factor A domain-containing protein 5B1 isoform X1
translation: MPGLINRATRCPLPLTASEVTSCVSGYAFGMTALLTYRNPEPQALEGLFVFPLDECTTVVGFEAAVSRRAVTVQIKDKAKIDDTYFGSCSFPDGRARDGSGRILMDEDMERIAFVANLGTVPPLESVSIFISTSSELQTLPSGAVRVLLPAVCVPRVPQPSLGNASSIPSLQLRTDKHYCGPGSPEPGSRFCLAQLLDAEATNPFEYEFSFHLEIRGPCLLAGVESPTHEIRADADPCARSAKSIVITLANKHTFDRPVEILIHPSEPHMPHILMEEGDMTPAEYERHLKGKNDFIKGTKKDPSAEKKMEIIRKRLNKDIPHHPVIMLSFCPDLATVQPGLRKAQGEFIFLIDRSRSMSGVNINCVKDALLVILKSLMPACLFNVIGFGSTFKTLFPASQTYCEESLAIACESIKRIRADMGSTNILSPLKWVIRQPIHRGHPRLLFLLTNGAISNTGKVLELLRNHSCSTRCYSFGMGPSACRRLVRGLAAVSRGSAEFLAEGERLQPKMIKSLKKAMAPVLSDVSVEWVFPESTEVLVSPISTSCLFPGDRLVGYGIVCDTSSYISNPRSDKRRRYSMMRSQESGSSVFFHSQEEGAGMESWNHSRDPEGCCPDRLVVGREPGGESDTDTGMDVKASSRRRAYSTPHAADHEPCRKVPTASDPDTALGRNPLRKTHLQDLQQVSPEPWQGDLQPFTANPTRMLGARRPSLLHRGCMSFCHDAEAPPVLDGLQQAARGLGPLDASRRLRSSSDSRSPGDLESAQHPSFTFETETSSDWEPQDLDFSAGCGSPRSPRTLCKAVVKGLRMNEPVQWEVTFDICPLFRERESREDGDTDPWSETFHHLAAKSVTRDFEHLAERECEIEHGSGRRYQVNAVHTSKACNVISKYTAFVPVDLSTNTYLPTIVEYTHTGAASKQGSQRSLRSGNRRHRGFSPGRPHSACGQNGDDGFYSMSAEESSLSPCSTPSLSAWERCGLPEGPLQSLSASSAQAQRSIESLFAARLTLNKTRLLMRAAKGFMSKSPSRASEGSSEGDNENIDYLPLVSLQLACGAFLMNTAFCDAVNIPMEKLKRTSPFACHRLALSPSSSYSTKASPSTEHKRLSSNQQLLVPNGHGKSPTTTDTALGAEDAGRLRHSSGSAVESISRALRAEKELSPPAITIRRFSSPESTAGSAGWQGSSSRGSGTDSSEVQALLFDMELQQQTEPEGMLWATAVALAWLENSSASYFIEWELVAAKASLWLSQQDFPEGYSLATVKAAAQQLFVLLRHWDENLEFNLLCYNPSSV
SIO_010081: VWA5B1
subclass of: SO_0000673
so part of: VWA5B1
location: complement(join(809407..810138,810328..810451,810613..810682,810914..810988,811475..811600,811888..812025,812594..812911,813060..813258,815511..815698,816668..816848,817075..817260,818673..818787,820050..820252,820325..820435,823343..823519,826010..826134,826786..826917,827191..827333,827850..828072,828395..828556,829001..829139))
location: region:809407-829139:-1
so has part: feature:829001-829139:-1:exon
so has part: feature:828395-828556:-1:exon
so has part: feature:827850-828072:-1:exon
so has part: feature:827191-827333:-1:exon
so has part: feature:826786-826917:-1:exon
so has part: feature:826010-826134:-1:exon
so has part: feature:823343-823519:-1:exon
so has part: feature:820325-820435:-1:exon
so has part: feature:820050-820252:-1:exon
so has part: feature:818673-818787:-1:exon
so has part: feature:817075-817260:-1:exon
so has part: feature:816668-816848:-1:exon
so has part: feature:815511-815698:-1:exon
so has part: feature:813060-813258:-1:exon
so has part: feature:812594-812911:-1:exon
so has part: feature:811888-812025:-1:exon
so has part: feature:811475-811600:-1:exon
so has part: feature:810914-810988:-1:exon
so has part: feature:810613-810682:-1:exon
so has part: feature:810328-810451:-1:exon
so has part: feature:809407-810138:-1:exon

XP_030363432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:829001-829139:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:828395-828556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:827850-828072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:827191-827333:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:826786-826917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:826010-826134:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:823343-823519:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:820325-820435:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:820050-820252:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:818673-818787:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:817075-817260:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:816668-816848:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:815511-815698:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:813060-813258:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:812594-812911:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:811888-812025:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:811475-811600:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:810914-810988:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:810613-810682:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:810328-810451:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:809407-810138:-1:exon

VWA5B1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: VWA5B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: von Willebrand factor A domain-containing protein 5B1 isoform X1
translation: MPGLINRATRCPLPLTASEVTSCVSGYAFGMTALLTYRNPEPQALEGLFVFPLDECTTVVGFEAAVSRRAVTVQIKDKAKIDDTYFGSCSFPDGRARDGSGRILMDEDMERIAFVANLGTVPPLESVSIFISTSSELQTLPSGAVRVLLPAVCVPRVPQPSLGNASSIPSLQLRTDKHYCGPGSPEPGSRFCLAQLLDAEATNPFEYEFSFHLEIRGPCLLAGVESPTHEIRADADPCARSAKSIVITLANKHTFDRPVEILIHPSEPHMPHILMEEGDMTPAEYERHLKGKNDFIKGTKKDPSAEKKMEIIRKRLNKDIPHHPVIMLSFCPDLATVQPGLRKAQGEFIFLIDRSRSMSGVNINCVKDALLVILKSLMPACLFNVIGFGSTFKTLFPASQTYCEESLAIACESIKRIRADMGSTNILSPLKWVIRQPIHRGHPRLLFLLTNGAISNTGKVLELLRNHSCSTRCYSFGMGPSACRRLVRGLAAVSRGSAEFLAEGERLQPKMIKSLKKAMAPVLSDVSVEWVFPESTEVLVSPISTSCLFPGDRLVGYGIVCDTSSYISNPRSDKRRRYSMMRSQESGSSVFFHSQEEGAGMESWNHSRDPEGCCPDRLVVGREPGGESDTDTGMDVKASSRRRAYSTPHAADHEPCRKVPTASDPDTALGRNPLRKTHLQDLQQVSPEPWQGDLQPFTANPTRMLGARRPSLLHRGCMSFCHDAEAPPVLDGLQQAARGLGPLDASRRLRSSSDSRSPGDLESAQHPSFTFETETSSDWEPQDLDFSAGCGSPRSPRTLCKAVVKGLRMNEPVQWEVTFDICPLFRERESREDGDTDPWSETFHHLAAKSVTRDFEHLAERECEIEHGSGRRYQVNAVHTSKACNVISKYTAFVPVDLSTNTYLPTIVEYTHTGAASKQGSQRSLRSGNRRHRGFSPGRPHSACGQNGDDGFYSMSAEESSLSPCSTPSLSAWERCGLPEGPLQSLSASSAQAQRSIESLFAARLTLNKTRLLMRAAKGFMSKSPSRASEGSSEGDNENIDYLPLVSLQLACGAFLMNTAFCDAVNIPMEKLKRTSPFACHRLALSPSSSYSTKASPSTEHKRLSSNQQLLVPNGHGKSPTTTDTALGAEDAGRLRHSSGSAVESISRALRAEKELSPPAITIRRFSSPESTAGSAGWQGSSSRGSGTDSSEVQALLFDMELQQQTEPEGMLWATAVALAWLENSSASYFIEWELVAAKASLWLSQQDFPEGYSLATVKAAAQQLFVLLRHWDENLEFNLLCYNPSSV
SIO_010081: VWA5B1
subclass of: SO_0000673
so part of: VWA5B1
location: complement(join(809407..810138,810328..810451,810613..810682,810914..810988,811475..811600,811888..812025,812594..812911,813060..813258,815511..815698,816668..816848,817075..817260,818673..818787,820050..820252,820325..820435,823343..823519,826010..826134,826786..826917,827191..827333,827850..828072,828395..828556,829001..829139))
location: region:809407-829139:-1
so has part: feature:829001-829139:-1:exon
so has part: feature:828395-828556:-1:exon
so has part: feature:827850-828072:-1:exon
so has part: feature:827191-827333:-1:exon
so has part: feature:826786-826917:-1:exon
so has part: feature:826010-826134:-1:exon
so has part: feature:823343-823519:-1:exon
so has part: feature:820325-820435:-1:exon
so has part: feature:820050-820252:-1:exon
so has part: feature:818673-818787:-1:exon
so has part: feature:817075-817260:-1:exon
so has part: feature:816668-816848:-1:exon
so has part: feature:815511-815698:-1:exon
so has part: feature:813060-813258:-1:exon
so has part: feature:812594-812911:-1:exon
so has part: feature:811888-812025:-1:exon
so has part: feature:811475-811600:-1:exon
so has part: feature:810914-810988:-1:exon
so has part: feature:810613-810682:-1:exon
so has part: feature:810328-810451:-1:exon
so has part: feature:809407-810138:-1:exon

XP_030363433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:829001-829139:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:828395-828556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:827850-828072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:827191-827333:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:826786-826917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:826010-826134:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:823343-823519:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:820325-820435:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:820050-820252:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:818673-818787:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:817075-817260:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:816668-816848:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:815511-815698:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:813060-813258:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:812594-812911:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:811888-812025:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:811475-811600:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:810914-810988:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:810613-810682:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:810328-810451:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:809407-810138:-1:exon

LOC115617282
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115617282
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 838405..850447
location: region:838405-850447:1
so has part: feature:838405-850447:1:exon
subclass of: SO_0000010

115617282
type: Gene
SIO_000068: ncbigene

position:838405:1
position: 838405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:850447:1
position: 850447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:838405-850447:1:exon

LOC115617282
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115617282
product: ATP-dependent RNA helicase DDX19B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 30 ESTs, 470 long SRA reads, 42 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030507575.1
SIO_010081: LOC115617282
subclass of: SO_0000673
so part of: LOC115617282
location: join(838405..838530,839392..839440,839841..839894,840750..840885,843962..844054,844636..844738,845471..845585,845765..845942,846384..846621,847122..847284,847821..848012,848619..850447)
location: region:838405-850447:1
so has part: feature:838405-838530:1:exon
so has part: feature:839392-839440:1:exon
so has part: feature:839841-839894:1:exon
so has part: feature:840750-840885:1:exon
so has part: feature:843962-844054:1:exon
so has part: feature:844636-844738:1:exon
so has part: feature:845471-845585:1:exon
so has part: feature:845765-845942:1:exon
so has part: feature:846384-846621:1:exon
so has part: feature:847122-847284:1:exon
so has part: feature:847821-848012:1:exon
so has part: feature:848619-850447:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:838405-838530:1:exon

position:838530:1
position: 838530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:839392-839440:1:exon

position:839392:1
position: 839392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:839440:1
position: 839440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:839841-839894:1:exon

position:839841:1
position: 839841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:839894:1
position: 839894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:840750-840885:1:exon

position:840750:1
position: 840750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:840885:1
position: 840885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:843962-844054:1:exon

position:843962:1
position: 843962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:844054:1
position: 844054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:844636-844738:1:exon

position:844636:1
position: 844636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:844738:1
position: 844738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:845471-845585:1:exon

position:845471:1
position: 845471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845585:1
position: 845585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:845765-845942:1:exon

position:845765:1
position: 845765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845942:1
position: 845942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:846384-846621:1:exon

position:846384:1
position: 846384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:846621:1
position: 846621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:847122-847284:1:exon

position:847122:1
position: 847122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:847284:1
position: 847284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:847821-848012:1:exon

position:847821:1
position: 847821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:848012:1
position: 848012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:848619-850447:1:exon

position:848619:1
position: 848619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115617282
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115617282
product: ATP-dependent RNA helicase DDX19B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 ESTs, 443 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030507576.1
SIO_010081: LOC115617282
subclass of: SO_0000673
so part of: LOC115617282
location: join(838417..838530,839841..839894,840750..840885,843962..844054,844636..844738,845471..845585,845765..845942,846384..846621,847122..847284,847821..848012,848619..850447)
location: region:838417-850447:1
so has part: feature:838417-838530:1:exon
so has part: feature:839841-839894:1:exon
so has part: feature:840750-840885:1:exon
so has part: feature:843962-844054:1:exon
so has part: feature:844636-844738:1:exon
so has part: feature:845471-845585:1:exon
so has part: feature:845765-845942:1:exon
so has part: feature:846384-846621:1:exon
so has part: feature:847122-847284:1:exon
so has part: feature:847821-848012:1:exon
so has part: feature:848619-850447:1:exon

position:838417:1
position: 838417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:838417-838530:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:839841-839894:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:840750-840885:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:843962-844054:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:844636-844738:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:845471-845585:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:845765-845942:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:846384-846621:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:847122-847284:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:847821-848012:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:848619-850447:1:exon

LOC115617282
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115617282
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase DDX19B isoform X1
translation: MATDSWALAVDEQEAAAESLSSLHLKEEKTKPDANGAVVKADDNIEKTEDEEKEDRAAQSLLNKLIRSNLVDTTNQVEVLQRDPTSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPGNKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRDCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCSNRDEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKHSMNILNRIQEHFNKKINKLDTDDLDEIEKITN
SIO_010081: LOC115617282
subclass of: SO_0000673
so part of: LOC115617282
location: join(838474..838530,839392..839440,839841..839894,840750..840885,843962..844054,844636..844738,845471..845585,845765..845942,846384..846621,847122..847284,847821..848012,848619..848680)
location: region:838474-848680:1
so has part: feature:838474-838530:1:exon
so has part: feature:839392-839440:1:exon
so has part: feature:839841-839894:1:exon
so has part: feature:840750-840885:1:exon
so has part: feature:843962-844054:1:exon
so has part: feature:844636-844738:1:exon
so has part: feature:845471-845585:1:exon
so has part: feature:845765-845942:1:exon
so has part: feature:846384-846621:1:exon
so has part: feature:847122-847284:1:exon
so has part: feature:847821-848012:1:exon
so has part: feature:848619-848680:1:exon

XP_030363435.1
type: Protein
SIO_000068: ncbiprotein

position:838474:1
position: 838474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:848680:1
position: 848680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:838474-838530:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:839392-839440:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:839841-839894:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:840750-840885:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:843962-844054:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:844636-844738:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:845471-845585:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:845765-845942:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:846384-846621:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:847122-847284:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:847821-848012:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:848619-848680:1:exon

LOC115617282
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115617282
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase DDX19B isoform X2
translation: MGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPGNKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRDCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCSNRDEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKHSMNILNRIQEHFNKKINKLDTDDLDEIEKITN
SIO_010081: LOC115617282
subclass of: SO_0000673
so part of: LOC115617282
location: join(843993..844054,844636..844738,845471..845585,845765..845942,846384..846621,847122..847284,847821..848012,848619..848680)
location: region:843993-848680:1
so has part: feature:843993-844054:1:exon
so has part: feature:844636-844738:1:exon
so has part: feature:845471-845585:1:exon
so has part: feature:845765-845942:1:exon
so has part: feature:846384-846621:1:exon
so has part: feature:847122-847284:1:exon
so has part: feature:847821-848012:1:exon
so has part: feature:848619-848680:1:exon

XP_030363436.1
type: Protein
SIO_000068: ncbiprotein

position:843993:1
position: 843993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:843993-844054:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:844636-844738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:845471-845585:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:845765-845942:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:846384-846621:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:847122-847284:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:847821-848012:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:848619-848680:1:exon

UBXN10
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: UBXN10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(851230..854982)
location: region:851230-854982:-1
so has part: feature:851230-854982:-1:exon
subclass of: SO_0000010

115617283
type: Gene
SIO_000068: ncbigene

position:851230:-1
position: 851230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854982:-1
position: 854982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:851230-854982:-1:exon

UBXN10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: UBXN10
product: UBX domain protein 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 47 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030507577.1
SIO_010081: UBXN10
subclass of: SO_0000673
so part of: UBXN10
location: complement(join(851230..853459,854930..854982))
location: region:851230-854982:-1
so has part: feature:854930-854982:-1:exon
so has part: feature:851230-853459:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:854930-854982:-1:exon

position:854930:-1
position: 854930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:851230-853459:-1:exon

position:853459:-1
position: 853459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBXN10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: UBXN10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UBX domain-containing protein 10
translation: MATAALLNSAPSPLCFPSSTAASFLWSDTTTMHVTRPKSAKGRTRSSFNYSQSTEACPCHVPSSPPPPAPHQLVSSRRALFRKPAFPTSQVSPEEIPELLQHVPLRTSSSLNKYRVLPSIGCKGAGSSTVEAVAEQTDRLTVSGKREDIPKGKTLPGEQGSASMLLESSHKQCPPEKPGGRMSPSTSALGGLEELPKEEPHLLLAVRSPSGQRFEHHFQPTDSLQTVLAMAEQKTSATYKRCSVETMEVPRRSFSDLTRSLHECGILHKSVLCIRQKEQHDADL
SIO_010081: UBXN10
subclass of: SO_0000673
so part of: UBXN10
location: complement(852590..853444)
location: region:852590-853444:-1
so has part: feature:852590-853444:-1:exon

XP_030363437.1
type: Protein
SIO_000068: ncbiprotein

position:852590:-1
position: 852590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853444:-1
position: 853444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:852590-853444:-1:exon

LOC115617375
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115617375
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 856412..860536
location: region:856412-860536:1
so has part: feature:856412-860536:1:exon
subclass of: SO_0000010

115617375
type: Gene
SIO_000068: ncbigene

position:856412:1
position: 856412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860536:1
position: 860536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:856412-860536:1:exon

LOC115617375
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115617375
product: phospholipase A2, membrane associated-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030507764.1
SIO_010081: LOC115617375
subclass of: SO_0000673
so part of: LOC115617375
location: join(856412..856589,858706..858755,859479..859623,859837..859943,860257..860536)
location: region:856412-860536:1
so has part: feature:856412-856589:1:exon
so has part: feature:858706-858755:1:exon
so has part: feature:859479-859623:1:exon
so has part: feature:859837-859943:1:exon
so has part: feature:860257-860536:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:856412-856589:1:exon

position:856589:1
position: 856589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:858706-858755:1:exon

position:858706:1
position: 858706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858755:1
position: 858755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:859479-859623:1:exon

position:859479:1
position: 859479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859623:1
position: 859623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:859837-859943:1:exon

position:859837:1
position: 859837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859943:1
position: 859943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:860257-860536:1:exon

position:860257:1
position: 860257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115617375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115617375
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipase A2, membrane associated-like
translation: MKNLLFVLFLACGLLPARSSVLELERMIRAATGRSALLSYSWYGCFCGIGGRGTPVDSTDRCCHAHDCCYRKLREGTCTPLITPYRFDIADGDIICSDEQSWCKRETCLCDKAVASCFASALHSYNRSYLFYFKLKCQGSKLQC
SIO_010081: LOC115617375
subclass of: SO_0000673
so part of: LOC115617375
location: join(858719..858755,859479..859623,859837..859943,860257..860402)
location: region:858719-860402:1
so has part: feature:858719-858755:1:exon
so has part: feature:859479-859623:1:exon
so has part: feature:859837-859943:1:exon
so has part: feature:860257-860402:1:exon

XP_030363624.1
type: Protein
SIO_000068: ncbiprotein

position:858719:1
position: 858719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860402:1
position: 860402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:858719-858755:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:859479-859623:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:859837-859943:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:860257-860402:1:exon

LOC115617420
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115617420
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 861994..862848
location: region:861994-862848:1
so has part: feature:861994-862848:1:exon
subclass of: SO_0000010

115617420
type: Gene
SIO_000068: ncbigene

position:861994:1
position: 861994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:862848:1
position: 862848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:861994-862848:1:exon

LOC115617420
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115617420
product: basic phospholipase A2 Cdr-13-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 57% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030507872.1
SIO_010081: LOC115617420
subclass of: SO_0000673
so part of: LOC115617420
location: join(861994..862039,862297..862441,862542..862648,862724..862848)
location: region:861994-862848:1
so has part: feature:861994-862039:1:exon
so has part: feature:862297-862441:1:exon
so has part: feature:862542-862648:1:exon
so has part: feature:862724-862848:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:861994-862039:1:exon

position:862039:1
position: 862039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:862297-862441:1:exon

position:862297:1
position: 862297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:862441:1
position: 862441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:862542-862648:1:exon

position:862542:1
position: 862542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:862648:1
position: 862648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:862724-862848:1:exon

position:862724:1
position: 862724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115617420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115617420
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic phospholipase A2 Cdr-13-like
translation: MNSLLAFAVLIAWALSPAHGSLWDLQKMITKVTGKNALLHYSFYGCYCGFGGRGQPKDATDRCCQLHDACYNSLLRHHCNASVQSYRYDWSSSSPSCRKGSWCSQLSCECDRSLALCLKRSIGSYRRRLQFYPKHWCR
SIO_010081: LOC115617420
subclass of: SO_0000673
so part of: LOC115617420
location: join(862000..862039,862297..862441,862542..862648,862724..862848)
location: region:862000-862848:1
so has part: feature:862000-862039:1:exon
so has part: feature:862297-862441:1:exon
so has part: feature:862542-862648:1:exon
so has part: feature:862724-862848:1:exon

XP_030363732.1
type: Protein
SIO_000068: ncbiprotein

position:862000:1
position: 862000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:862000-862039:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:862297-862441:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:862542-862648:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:862724-862848:1:exon

LOC115617419
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115617419
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 863177..865242
location: region:863177-865242:1
so has part: feature:863177-865242:1:exon
subclass of: SO_0000010

115617419
type: Gene
SIO_000068: ncbigene

position:863177:1
position: 863177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865242:1
position: 865242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:863177-865242:1:exon

LOC115617419
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115617419
product: basic phospholipase A2 A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 112 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030507871.1
SIO_010081: LOC115617419
subclass of: SO_0000673
so part of: LOC115617419
location: join(863177..863293,863704..863760,863931..864036,864496..864602,864740..865242)
location: region:863177-865242:1
so has part: feature:863177-863293:1:exon
so has part: feature:863704-863760:1:exon
so has part: feature:863931-864036:1:exon
so has part: feature:864496-864602:1:exon
so has part: feature:864740-865242:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:863177-863293:1:exon

position:863293:1
position: 863293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:863704-863760:1:exon

position:863704:1
position: 863704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:863760:1
position: 863760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:863931-864036:1:exon

position:863931:1
position: 863931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864036:1
position: 864036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:864496-864602:1:exon

position:864496:1
position: 864496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864602:1
position: 864602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:864740-865242:1:exon

position:864740:1
position: 864740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115617419
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115617419
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic phospholipase A2 A-like
translation: MKVLLTVAVLFACCVFTAHGKLPHTYAPGLEGSTVGNLTHVCSSASMDRCCRLRACCYARLAARRCRVGPIQPPMAPQARLPTCRSGTWCQRAACRCERAAQLCRLRSRWLLRRRGKCRGRAGWC
SIO_010081: LOC115617419
subclass of: SO_0000673
so part of: LOC115617419
location: join(863721..863760,863931..864036,864496..864602,864740..864864)
location: region:863721-864864:1
so has part: feature:863721-863760:1:exon
so has part: feature:863931-864036:1:exon
so has part: feature:864496-864602:1:exon
so has part: feature:864740-864864:1:exon

XP_030363731.1
type: Protein
SIO_000068: ncbiprotein

position:863721:1
position: 863721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864864:1
position: 864864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:863721-863760:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:863931-864036:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:864496-864602:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:864740-864864:1:exon

LOC115617418
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115617418
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 867878..869732
location: region:867878-869732:1
so has part: feature:867878-869732:1:exon
subclass of: SO_0000010

115617418
type: Gene
SIO_000068: ncbigene

position:867878:1
position: 867878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869732:1
position: 869732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:867878-869732:1:exon

LOC115617418
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115617418
product: group IIE secretory phospholipase A2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030507870.1
SIO_010081: LOC115617418
subclass of: SO_0000673
so part of: LOC115617418
location: join(867878..867919,868047..868194,868709..868815,869386..869732)
location: region:867878-869732:1
so has part: feature:867878-867919:1:exon
so has part: feature:868047-868194:1:exon
so has part: feature:868709-868815:1:exon
so has part: feature:869386-869732:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:867878-867919:1:exon

position:867919:1
position: 867919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:868047-868194:1:exon

position:868047:1
position: 868047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868194:1
position: 868194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:868709-868815:1:exon

position:868709:1
position: 868709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868815:1
position: 868815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:869386-869732:1:exon

position:869386:1
position: 869386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115617418
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115617418
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: group IIE secretory phospholipase A2-like
translation: MKLFLLLLCLAGLVLAGCNVIQFGSMIKHKTGKSPLSYNGYGCYCGVGGSKKPLDATDRCCHAHDCCYKKLSSSRCSPKLVTYKYSTQGSQITCGAGTWCERGSCECDRRAAECFQKAASTFRNSYRNYPNSLCKGSTPSC
SIO_010081: LOC115617418
subclass of: SO_0000673
so part of: LOC115617418
location: join(867892..867919,868047..868194,868709..868815,869386..869528)
location: region:867892-869528:1
so has part: feature:867892-867919:1:exon
so has part: feature:868047-868194:1:exon
so has part: feature:868709-868815:1:exon
so has part: feature:869386-869528:1:exon

XP_030363730.1
type: Protein
SIO_000068: ncbiprotein

position:867892:1
position: 867892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869528:1
position: 869528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:867892-867919:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:868047-868194:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:868709-868815:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:869386-869528:1:exon

OTUD3
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: OTUD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(872260..883169)
location: region:872260-883169:-1
so has part: feature:872260-883169:-1:exon
subclass of: SO_0000010

115617293
type: Gene
SIO_000068: ncbigene

position:872260:-1
position: 872260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883169:-1
position: 883169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:872260-883169:-1:exon

OTUD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: OTUD3
product: OTU deubiquitinase 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 62 long SRA reads, 3 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030507603.2
SIO_010081: OTUD3
subclass of: SO_0000673
so part of: OTUD3
location: complement(join(872260..872531,874240..874657,874996..875177,875445..875541,876261..876386,877380..877502,880220..880332,881768..881916,882980..883169))
location: region:872260-883169:-1
so has part: feature:882980-883169:-1:exon
so has part: feature:881768-881916:-1:exon
so has part: feature:880220-880332:-1:exon
so has part: feature:877380-877502:-1:exon
so has part: feature:876261-876386:-1:exon
so has part: feature:875445-875541:-1:exon
so has part: feature:874996-875177:-1:exon
so has part: feature:874240-874657:-1:exon
so has part: feature:872260-872531:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:882980-883169:-1:exon

position:882980:-1
position: 882980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:881768-881916:-1:exon

position:881768:-1
position: 881768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881916:-1
position: 881916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:880220-880332:-1:exon

position:880220:-1
position: 880220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:880332:-1
position: 880332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:877380-877502:-1:exon

position:877380:-1
position: 877380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:877502:-1
position: 877502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:876261-876386:-1:exon

position:876261:-1
position: 876261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876386:-1
position: 876386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:875445-875541:-1:exon

position:875445:-1
position: 875445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875541:-1
position: 875541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:874996-875177:-1:exon

position:874996:-1
position: 874996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875177:-1
position: 875177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:874240-874657:-1:exon

position:874240:-1
position: 874240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874657:-1
position: 874657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:872260-872531:-1:exon

position:872531:-1
position: 872531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OTUD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: OTUD3
product: OTU deubiquitinase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 44 long SRA reads, 3 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030507602.2
SIO_010081: OTUD3
subclass of: SO_0000673
so part of: OTUD3
location: complement(join(872260..872531,872620..872752,874240..874657,874996..875177,875445..875541,876261..876386,877380..877502,880220..880332,881768..881916,882980..883169))
location: region:872260-883169:-1
so has part: feature:882980-883169:-1:exon
so has part: feature:881768-881916:-1:exon
so has part: feature:880220-880332:-1:exon
so has part: feature:877380-877502:-1:exon
so has part: feature:876261-876386:-1:exon
so has part: feature:875445-875541:-1:exon
so has part: feature:874996-875177:-1:exon
so has part: feature:874240-874657:-1:exon
so has part: feature:872620-872752:-1:exon
so has part: feature:872260-872531:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:882980-883169:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:881768-881916:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:880220-880332:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:877380-877502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:876261-876386:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875445-875541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:874996-875177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:874240-874657:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:872620-872752:-1:exon

position:872620:-1
position: 872620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:872752:-1
position: 872752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:872260-872531:-1:exon

OTUD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: OTUD3
product: OTU deubiquitinase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 60 long SRA reads, 3 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030507600.2
SIO_010081: OTUD3
subclass of: SO_0000673
so part of: OTUD3
location: complement(join(872260..872531,872620..872764,874240..874657,874996..875177,875445..875541,876261..876386,877380..877502,880220..880332,881768..881916,882980..883169))
location: region:872260-883169:-1
so has part: feature:882980-883169:-1:exon
so has part: feature:881768-881916:-1:exon
so has part: feature:880220-880332:-1:exon
so has part: feature:877380-877502:-1:exon
so has part: feature:876261-876386:-1:exon
so has part: feature:875445-875541:-1:exon
so has part: feature:874996-875177:-1:exon
so has part: feature:874240-874657:-1:exon
so has part: feature:872620-872764:-1:exon
so has part: feature:872260-872531:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:882980-883169:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:881768-881916:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:880220-880332:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:877380-877502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:876261-876386:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875445-875541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:874996-875177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:874240-874657:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:872620-872764:-1:exon

position:872764:-1
position: 872764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:872260-872531:-1:exon

OTUD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: OTUD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: OTU domain-containing protein 3
translation: MSRKPAAKARPGAAAAAAAGRARRPRHSPAPGPAPGPAPGGGLARQLRALGLKLREVPGDGNCLFRALGDQLEGHSRNHLRHRQETVDYMIQQQEDFEPFVEDDVPFERHVSNLAKPGTFAGNDAIVAFARNNQMNVVIHQLNAPLWQIRGTDKSNARELHIAYRDGEHYDSVRRISDDSEAPAYLQMELLCKKESGTKEEEKPQKGDSEDEIEVEMEDAIQEVCNATGCSDIDLVSQVLEVEDYNVESAIFAVLQMNEMKRISTEEQHDPQSTAQEVHSPALGEENGTASRISGNQSLHQGEIENHKGQPKSYKENRASRNPKASKKQKKEQQRLEKKKRQEERHRQKVLGNRSNCPVSGRRDTDSTNHVTLVKAIGALNI
SIO_010081: OTUD3
subclass of: SO_0000673
so part of: OTUD3
location: complement(join(874481..874657,874996..875177,875445..875541,876261..876386,877380..877502,880220..880332,881768..881916,882980..883161))
location: region:874481-883161:-1
so has part: feature:882980-883161:-1:exon
so has part: feature:881768-881916:-1:exon
so has part: feature:880220-880332:-1:exon
so has part: feature:877380-877502:-1:exon
so has part: feature:876261-876386:-1:exon
so has part: feature:875445-875541:-1:exon
so has part: feature:874996-875177:-1:exon
so has part: feature:874481-874657:-1:exon

XP_030363460.1
type: Protein
SIO_000068: ncbiprotein

position:874481:-1
position: 874481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883161:-1
position: 883161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:882980-883161:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:881768-881916:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:880220-880332:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:877380-877502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:876261-876386:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875445-875541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:874996-875177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:874481-874657:-1:exon

OTUD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: OTUD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: OTU domain-containing protein 3
translation: MSRKPAAKARPGAAAAAAAGRARRPRHSPAPGPAPGPAPGGGLARQLRALGLKLREVPGDGNCLFRALGDQLEGHSRNHLRHRQETVDYMIQQQEDFEPFVEDDVPFERHVSNLAKPGTFAGNDAIVAFARNNQMNVVIHQLNAPLWQIRGTDKSNARELHIAYRDGEHYDSVRRISDDSEAPAYLQMELLCKKESGTKEEEKPQKGDSEDEIEVEMEDAIQEVCNATGCSDIDLVSQVLEVEDYNVESAIFAVLQMNEMKRISTEEQHDPQSTAQEVHSPALGEENGTASRISGNQSLHQGEIENHKGQPKSYKENRASRNPKASKKQKKEQQRLEKKKRQEERHRQKVLGNRSNCPVSGRRDTDSTNHVTLVKAIGALNI
SIO_010081: OTUD3
subclass of: SO_0000673
so part of: OTUD3
location: complement(join(874481..874657,874996..875177,875445..875541,876261..876386,877380..877502,880220..880332,881768..881916,882980..883161))
location: region:874481-883161:-1
so has part: feature:882980-883161:-1:exon
so has part: feature:881768-881916:-1:exon
so has part: feature:880220-880332:-1:exon
so has part: feature:877380-877502:-1:exon
so has part: feature:876261-876386:-1:exon
so has part: feature:875445-875541:-1:exon
so has part: feature:874996-875177:-1:exon
so has part: feature:874481-874657:-1:exon

XP_030363462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:882980-883161:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:881768-881916:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:880220-880332:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:877380-877502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:876261-876386:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875445-875541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:874996-875177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:874481-874657:-1:exon

OTUD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: OTUD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: OTU domain-containing protein 3
translation: MSRKPAAKARPGAAAAAAAGRARRPRHSPAPGPAPGPAPGGGLARQLRALGLKLREVPGDGNCLFRALGDQLEGHSRNHLRHRQETVDYMIQQQEDFEPFVEDDVPFERHVSNLAKPGTFAGNDAIVAFARNNQMNVVIHQLNAPLWQIRGTDKSNARELHIAYRDGEHYDSVRRISDDSEAPAYLQMELLCKKESGTKEEEKPQKGDSEDEIEVEMEDAIQEVCNATGCSDIDLVSQVLEVEDYNVESAIFAVLQMNEMKRISTEEQHDPQSTAQEVHSPALGEENGTASRISGNQSLHQGEIENHKGQPKSYKENRASRNPKASKKQKKEQQRLEKKKRQEERHRQKVLGNRSNCPVSGRRDTDSTNHVTLVKAIGALNI
SIO_010081: OTUD3
subclass of: SO_0000673
so part of: OTUD3
location: complement(join(874481..874657,874996..875177,875445..875541,876261..876386,877380..877502,880220..880332,881768..881916,882980..883161))
location: region:874481-883161:-1
so has part: feature:882980-883161:-1:exon
so has part: feature:881768-881916:-1:exon
so has part: feature:880220-880332:-1:exon
so has part: feature:877380-877502:-1:exon
so has part: feature:876261-876386:-1:exon
so has part: feature:875445-875541:-1:exon
so has part: feature:874996-875177:-1:exon
so has part: feature:874481-874657:-1:exon

XP_030363463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:882980-883161:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:881768-881916:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:880220-880332:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:877380-877502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:876261-876386:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875445-875541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:874996-875177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:874481-874657:-1:exon

RNF186
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: RNF186
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 886389..887878
location: region:886389-887878:1
so has part: feature:886389-887878:1:exon
subclass of: SO_0000010

115617294
type: Gene
SIO_000068: ncbigene

position:886389:1
position: 886389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887878:1
position: 887878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:886389-887878:1:exon

RNF186
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: RNF186
product: ring finger protein 186
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030507604.1
SIO_010081: RNF186
subclass of: SO_0000673
so part of: RNF186
location: 886389..887878
location: region:886389-887878:1
so has part: feature:886389-887878:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:886389-887878:1:exon

RNF186
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: RNF186
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF186
translation: MEKSTEKLNKEHGSTAPGAPQAENQSPAPAVECAAGMSSAGPQTEDVKSLGFTEECVKETERPSGMEQDSPDASKPAVLERGCPSSVPLVLTNKNPPEGHGLEMNHQCSTTSIDLDCLVCFNKYSMNRVPKLLDCQHAFCAVCLKLILRKDGNTWIITCPLCRKATFVSGGLIRTLQTKEDIMKHLESPSSHPEVHISATGLGSSSWTRSSRDLRYRDENVPADNMLAVQRLLLLLLLAVILTILILPFIYSGMVKWVVCLMLALGVVMSVALCCTPKFFWRSNRDVLTSCHKETHIAAIA
SIO_010081: RNF186
subclass of: SO_0000673
so part of: RNF186
location: 886409..887314
location: region:886409-887314:1
so has part: feature:886409-887314:1:exon

XP_030363464.1
type: Protein
SIO_000068: ncbiprotein

position:886409:1
position: 886409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887314:1
position: 887314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:886409-887314:1:exon

TMCO4
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: TMCO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 891733..928390
location: region:891733-928390:1
so has part: feature:891733-928390:1:exon
subclass of: SO_0000010

115617291
type: Gene
SIO_000068: ncbigene

position:891733:1
position: 891733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:928390:1
position: 928390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:891733-928390:1:exon

TMCO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: TMCO4
product: transmembrane and coiled-coil domains 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030507595.1
SIO_010081: TMCO4
subclass of: SO_0000673
so part of: TMCO4
location: join(891733..891971,895629..895813,896197..896371,900931..900958,902891..903023,906583..906680,907400..907543,909987..910106,912130..912294,912786..912922,913934..914018,918119..918236,921100..921217,927278..928386)
location: region:891733-928386:1
so has part: feature:891733-891971:1:exon
so has part: feature:895629-895813:1:exon
so has part: feature:896197-896371:1:exon
so has part: feature:900931-900958:1:exon
so has part: feature:902891-903023:1:exon
so has part: feature:906583-906680:1:exon
so has part: feature:907400-907543:1:exon
so has part: feature:909987-910106:1:exon
so has part: feature:912130-912294:1:exon
so has part: feature:912786-912922:1:exon
so has part: feature:913934-914018:1:exon
so has part: feature:918119-918236:1:exon
so has part: feature:921100-921217:1:exon
so has part: feature:927278-928386:1:exon

position:928386:1
position: 928386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:891733-891971:1:exon

position:891971:1
position: 891971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:895629-895813:1:exon

position:895629:1
position: 895629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895813:1
position: 895813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:896197-896371:1:exon

position:896197:1
position: 896197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:896371:1
position: 896371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:900931-900958:1:exon

position:900931:1
position: 900931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900958:1
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