Strigops habroptila isolate Jane chromosome 13, bStrHab1.2.pri, whole genome shotgun sequence.
type: Entry
definition: Strigops habroptila isolate Jane chromosome 13, bStrHab1.2.pri, whole genome shotgun sequence.
sequence version: NC_044289.2
sequence date: 2020-03-26
sequence: sequence
division: CON
label: NC_044289.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA558775
dblink: SAMN09948751
keyword: WGS
keyword: RefSeq
source: Strigops habroptila (Kakapo)
organism: Strigops habroptila
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Psittaciformes; Psittacidae; Strigops.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM013775.2.\nOn Mar 26, 2020 this sequence version replaced NC_044289.1.\nAssembly name: bStrHab1.2.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/03/04. The original whole-genome shotgun project has the\naccession RXXE00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 08-NOV-2019\nAssembly Method :: FALCON v. 5.1.1; FALCON unzip v. 1.0.2;\n scaff10X v. git 4.28.2018; Bionano Solve\n DLS v. 3.2.1; Salsa2 HiC v. 2.0;\n smrtanalysis Arrow polishing & gap\n filling v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes v. 1.2.0;\n purge_haplotigs v. bit 7.10.2018; gEVAL\n manual curation v. 2019-11-08\nAssembly Name :: bStrHab1.2.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 76.1x\nSequencing Technology :: PacBio RSII; 10X Genomics linked reads;\n Bionano Genomics DLS; Arima Genomics HiC\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Strigops habroptila Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 16476160
topology: linear
so has quality: SO_0000987
location: 1..16476160
location: region:1-16476160:1
RO_0002162: 2489341

NC_044289
type: RefSeq
SIO_000068: refseq

PRJNA558775
type: BioProject
SIO_000068: bioproject

SAMN09948751
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16476160:1
position: 16476160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16476160:1:source
so part of: sequence
organism: Strigops habroptila
mol type: genomic DNA
isolate: Jane
chromosome: 13
sex: female
tissue type: blood in lysis buffer or EtOH
country: New Zealand: Anchor Island
lat lon: 45.757406 S 166.504927 E
collection date: 2013-04-13
collected by: Tim Raemaekers, Daryl Eason, Andrew Digby of Department of Conservation, New Zealand

2489341
type: Taxonomy
SIO_000068: taxonomy

LOC115615151
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115615151
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 8869..9857
location: region:8869-9857:1
so has part: feature:8869-9857:1:exon

115615151
type: Gene
SIO_000068: ncbigene

position:8869:1
position: 8869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9857:1
position: 9857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8869-9857:1:exon

LOC115615151
type: Exon
subclass of: SO_0000147
RO_0002162: 2489341
gene: LOC115615151
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115615151
subclass of: SO_0000673
so part of: LOC115615151
location: 8869..9857
location: region:8869-9857:1
so has part: feature:8869-9857:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8869-9857:1:exon

LOC115615153
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115615153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(21894..22687)
location: region:21894-22687:-1
so has part: feature:21894-22687:-1:exon

115615153
type: Gene
SIO_000068: ncbigene

position:21894:-1
position: 21894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22687:-1
position: 22687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21894-22687:-1:exon

LOC115615153
type: Exon
subclass of: SO_0000147
RO_0002162: 2489341
gene: LOC115615153
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 60 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115615153
subclass of: SO_0000673
so part of: LOC115615153
location: complement(21894..22687)
location: region:21894-22687:-1
so has part: feature:21894-22687:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21894-22687:-1:exon

LOC115615154
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115615154
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 28247..32471
location: region:28247-32471:1
so has part: feature:28247-32471:1:exon
subclass of: SO_0000011

115615154
type: Gene
SIO_000068: ncbigene

position:28247:1
position: 28247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32471:1
position: 32471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28247-32471:1:exon

LOC115615154
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2489341
nc RNA class: lncRNA
gene: LOC115615154
product: uncharacterized LOC115615154, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003993968.1
SIO_010081: LOC115615154
subclass of: SO_0000673
so part of: LOC115615154
location: join(28247..28843,29051..29199,30095..30875,31663..32471)
location: region:28247-32471:1
so has part: feature:28247-28843:1:exon
so has part: feature:29051-29199:1:exon
so has part: feature:30095-30875:1:exon
so has part: feature:31663-32471:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28247-28843:1:exon

position:28843:1
position: 28843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:29051-29199:1:exon

position:29051:1
position: 29051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29199:1
position: 29199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:30095-30875:1:exon

position:30095:1
position: 30095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30875:1
position: 30875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:31663-32471:1:exon

position:31663:1
position: 31663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115615154
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2489341
nc RNA class: lncRNA
gene: LOC115615154
product: uncharacterized LOC115615154, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_003993969.1
SIO_010081: LOC115615154
subclass of: SO_0000673
so part of: LOC115615154
location: join(28247..28843,29051..29199,30762..31157)
location: region:28247-31157:1
so has part: feature:28247-28843:1:exon
so has part: feature:29051-29199:1:exon
so has part: feature:30762-31157:1:exon

position:31157:1
position: 31157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28247-28843:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29051-29199:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:30762-31157:1:exon

position:30762:1
position: 30762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115615360
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115615360
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 35301..44206
location: region:35301-44206:1
so has part: feature:35301-44206:1:exon
subclass of: SO_0000010

115615360
type: Gene
SIO_000068: ncbigene

position:35301:1
position: 35301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44206:1
position: 44206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35301-44206:1:exon

LOC115615360
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115615360
product: serine/threonine-protein kinase pim-2-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 35% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030503447.1
SIO_010081: LOC115615360
subclass of: SO_0000673
so part of: LOC115615360
location: join(35301..35358,36152..36271,41336..42158,42239..42289,42591..42957,43161..43337,43579..43731,44121..44206)
location: region:35301-44206:1
so has part: feature:35301-35358:1:exon
so has part: feature:36152-36271:1:exon
so has part: feature:41336-42158:1:exon
so has part: feature:42239-42289:1:exon
so has part: feature:42591-42957:1:exon
so has part: feature:43161-43337:1:exon
so has part: feature:43579-43731:1:exon
so has part: feature:44121-44206:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35301-35358:1:exon

position:35358:1
position: 35358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:36152-36271:1:exon

position:36152:1
position: 36152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36271:1
position: 36271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:41336-42158:1:exon

position:41336:1
position: 41336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42158:1
position: 42158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:42239-42289:1:exon

position:42239:1
position: 42239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42289:1
position: 42289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:42591-42957:1:exon

position:42591:1
position: 42591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42957:1
position: 42957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:43161-43337:1:exon

position:43161:1
position: 43161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43337:1
position: 43337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:43579-43731:1:exon

position:43579:1
position: 43579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43731:1
position: 43731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:44121-44206:1:exon

position:44121:1
position: 44121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115615360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115615360
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:41964..41966,aa:OTHER)
transl except: (pos:43262..43264,aa:OTHER)
product: LOW QUALITY PROTEIN: serine/threonine-protein kinase pim-2-like
translation: MPEEAHRALRKAGGDPMVSEVSPQLLRELRHHEADVKLLQQQLRDRRSCTSSTSRGSWLWKSNRVRNRLPAEGSDGERRGPTAAVRPRGCCGRAGAHEPARGAGQGPLRRSTGSRGREPPPPPAAPSGGSGRPGHAGAEPLRQQQRQQQQQQVRRRQLSASRSPPTAGPRDGAPRLPPAPGPSSRPSRRGSPHRCALPILAVAALSRPAAATPEPPVRGAAAGVPAPAPGVRSGKVPVVLLTRIDPSAYLRSGTGGERHAAEPQPGKAXRPGSARPGAASRAGGGPARSSSGRVRHAGKEKQPLERLYRVGPLLERRGFGSVYSGVRLSDGVPVAIKRVARERISSWGERPSGTSIPMEIAMMRKVRSGCSAIIQLLDWFELPDCFLLVLERSDPSQDLSGFIKEWRVLPEDLARGIFMQVLVAVRHCHGCGVLHRDIKPKNIILNLRTGEVKLTDFGCSTLLRDTVYTKFSGTPVYYPPEWFHCPCYHGRPAAIWSLGVLLYEMVXGVVPFWRCKDIVRRQLFFRRQISAKCQHLIRWCLSMRACDRPSLEDIFNHPWLQRSSCPRRQPPSSSTA
SIO_010081: LOC115615360
subclass of: SO_0000673
so part of: LOC115615360
location: join(35301..35358,36152..36271,41336..42158,42239..42289,42591..42957,43161..43337,43579..43715)
location: region:35301-43715:1
so has part: feature:35301-35358:1:exon
so has part: feature:36152-36271:1:exon
so has part: feature:41336-42158:1:exon
so has part: feature:42239-42289:1:exon
so has part: feature:42591-42957:1:exon
so has part: feature:43161-43337:1:exon
so has part: feature:43579-43715:1:exon

XP_030359307.1
type: Protein
SIO_000068: ncbiprotein

position:43715:1
position: 43715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35301-35358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:36152-36271:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:41336-42158:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:42239-42289:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:42591-42957:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:43161-43337:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43579-43715:1:exon

LOC115615152
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115615152
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 51055..63881
location: region:51055-63881:1
so has part: feature:51055-63881:1:exon
subclass of: SO_0000010

115615152
type: Gene
SIO_000068: ncbigene

position:51055:1
position: 51055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63881:1
position: 63881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51055-63881:1:exon

LOC115615152
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115615152
product: olfactory receptor 14C36-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030502997.1
SIO_010081: LOC115615152
subclass of: SO_0000673
so part of: LOC115615152
location: join(51055..51798,63868..63881)
location: region:51055-63881:1
so has part: feature:51055-51798:1:exon
so has part: feature:63868-63881:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51055-51798:1:exon

position:51798:1
position: 51798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:63868-63881:1:exon

position:63868:1
position: 63868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115615152
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115615152
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 14C36-like
translation: MSYDRYVAICKPLHYGTLLGSRACVHMAAAAWGTGFLPALLHTANTFSLPLCRGNAVEQFFCEIPKLPKLSCSHSYLREVGLLVVSALIAIGCFVFIVGSYVQISRAMLSIPSEQGRHKAFSTCLPHLAVVSLFITTVIFAYLKPPSISSPSLDLVVSVLYSVVPPAVNPLIYSLRNQQLKDAVKKLMTGCVSAVIHCLLSSAKGSQCRS
SIO_010081: LOC115615152
subclass of: SO_0000673
so part of: LOC115615152
location: 51055..51687
location: region:51055-51687:1
so has part: feature:51055-51687:1:exon

XP_030358857.1
type: Protein
SIO_000068: ncbiprotein

position:51687:1
position: 51687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51055-51687:1:exon

LOC115615361
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115615361
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 61418..62397
location: region:61418-62397:1
so has part: feature:61418-62397:1:exon
subclass of: SO_0000010

115615361
type: Gene
SIO_000068: ncbigene

position:61418:1
position: 61418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62397:1
position: 62397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61418-62397:1:exon

LOC115615361
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115615361
product: olfactory receptor 14C36-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 84 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030503448.1
SIO_010081: LOC115615361
subclass of: SO_0000673
so part of: LOC115615361
location: 61418..62397
location: region:61418-62397:1
so has part: feature:61418-62397:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:61418-62397:1:exon

LOC115615361
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115615361
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 14C36-like
translation: MSNGSSITQFLLLSFTETRELQLWHFWFFLGIFLTALLGSGLIITSTACDQHLHTPMYFFLLNLSLLDLGSISTTVPKSMANSLWDTRAISYAGCAAQVFLFAFFIVAEFSLLTIMSYDRYVAICKPLHYGTLLGSRACVHMAAAAWGTGFLTALLHTANTFSLPLCRGNAVEQFFCEIPQILKLSCSDSYLREVGLLVVGFCLALGCFVFIVGSYVQIFKAVLRIPSEQGCHKAFSTCLPHLAVVSLFVSTGTFAYLKPPSISSPSLDLANAVLYSVVTPAVNPLIYSLRNQELRDAVRKLTTECVSAAIHCLLSSVKGSQCRS
SIO_010081: LOC115615361
subclass of: SO_0000673
so part of: LOC115615361
location: 61420..62397
location: region:61420-62397:1
so has part: feature:61420-62397:1:exon

XP_030359308.1
type: Protein
SIO_000068: ncbiprotein

position:61420:1
position: 61420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61420-62397:1:exon

LOC115615362
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115615362
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 71510..72117
location: region:71510-72117:1
so has part: feature:71510-72117:1:exon

115615362
type: Gene
SIO_000068: ncbigene

position:71510:1
position: 71510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72117:1
position: 72117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71510-72117:1:exon

LOC115615362
type: Exon
subclass of: SO_0000147
RO_0002162: 2489341
gene: LOC115615362
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 45% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115615362
subclass of: SO_0000673
so part of: LOC115615362
location: 71510..72117
location: region:71510-72117:1
so has part: feature:71510-72117:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71510-72117:1:exon

LOC115615363
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115615363
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 98020..152017
location: region:98020-152017:1
so has part: feature:98020-152017:1:exon

115615363
type: Gene
SIO_000068: ncbigene

position:98020:1
position: 98020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152017:1
position: 152017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98020-152017:1:exon

LOC115615363
type: Exon
subclass of: SO_0000147
RO_0002162: 2489341
gene: LOC115615363
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 16% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC115615363
subclass of: SO_0000673
so part of: LOC115615363
location: 98020..98653
location: region:98020-98653:1
so has part: feature:98020-98653:1:exon

position:98653:1
position: 98653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98020-98653:1:exon

LOC115615155
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115615155
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(124089..148411)
location: region:124089-148411:-1
so has part: feature:124089-148411:-1:exon
subclass of: SO_0000011

115615155
type: Gene
SIO_000068: ncbigene

position:124089:-1
position: 124089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148411:-1
position: 148411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124089-148411:-1:exon

LOC115615155
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2489341
nc RNA class: lncRNA
gene: LOC115615155
product: uncharacterized LOC115615155
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003993971.1
SIO_010081: LOC115615155
subclass of: SO_0000673
so part of: LOC115615155
location: complement(join(124089..124261,131921..131928,148400..148411))
location: region:124089-148411:-1
so has part: feature:148400-148411:-1:exon
so has part: feature:131921-131928:-1:exon
so has part: feature:124089-124261:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:148400-148411:-1:exon

position:148400:-1
position: 148400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:131921-131928:-1:exon

position:131921:-1
position: 131921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131928:-1
position: 131928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:124089-124261:-1:exon

position:124261:-1
position: 124261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115615363
type: Exon
subclass of: SO_0000147
RO_0002162: 2489341
gene: LOC115615363
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 16% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC115615363
subclass of: SO_0000673
so part of: LOC115615363
location: 151877..152017
location: region:151877-152017:1
so has part: feature:151877-152017:1:exon

position:151877:1
position: 151877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151877-152017:1:exon

LOC115615364
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115615364
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 199227..200259
location: region:199227-200259:1
so has part: feature:199227-200259:1:exon
subclass of: SO_0000010

115615364
type: Gene
SIO_000068: ncbigene

position:199227:1
position: 199227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200259:1
position: 200259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199227-200259:1:exon

LOC115615364
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115615364
product: olfactory receptor 14C36-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 39% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030503449.1
SIO_010081: LOC115615364
subclass of: SO_0000673
so part of: LOC115615364
location: 199227..200259
location: region:199227-200259:1
so has part: feature:199227-200259:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:199227-200259:1:exon

LOC115615364
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115615364
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 14C36-like
translation: MTVPCAQRQQMSNGSSITQFLLLPFADMWELQLCHFWLFLGISLAALLGNGLIITSTACDQHLHTPMYFFLLNLSLLDLGSISTTVPKSMANSLWDTRAISYSSCAAQAFFFLFFIIAEFYLLTVMSYNRYVAICKPLQYGTLLSSRACVHMAAAAWGTGFLNALLHTANTFSLLLCRGNAVEQFFCEIPPILKLSCSDSCLREVGILVLGTCFSFGCFVFIVESCVQIFRAMLRIPSEQGCDKAFSTCLPHLIVVSLFVSTAVFTYLKPPSMSSPLLDLVVSVLYSVMPPVVNPLIYSLRNQELKDAVRKLLTGCVSAGIHCLLSSTKGSQCRS
SIO_010081: LOC115615364
subclass of: SO_0000673
so part of: LOC115615364
location: 199252..200259
location: region:199252-200259:1
so has part: feature:199252-200259:1:exon

XP_030359309.1
type: Protein
SIO_000068: ncbiprotein

position:199252:1
position: 199252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199252-200259:1:exon

LOC115615365
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115615365
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(203180..214020)
location: region:203180-214020:-1
so has part: feature:203180-214020:-1:exon

115615365
type: Gene
SIO_000068: ncbigene

position:203180:-1
position: 203180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214020:-1
position: 214020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203180-214020:-1:exon

LOC115615365
type: Exon
subclass of: SO_0000147
RO_0002162: 2489341
gene: LOC115615365
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC115615365
subclass of: SO_0000673
so part of: LOC115615365
location: complement(203180..203307)
location: region:203180-203307:-1
so has part: feature:203180-203307:-1:exon

position:203307:-1
position: 203307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203180-203307:-1:exon

LOC115615365
type: Exon
subclass of: SO_0000147
RO_0002162: 2489341
gene: LOC115615365
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC115615365
subclass of: SO_0000673
so part of: LOC115615365
location: complement(203910..204011)
location: region:203910-204011:-1
so has part: feature:203910-204011:-1:exon

position:203910:-1
position: 203910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204011:-1
position: 204011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203910-204011:-1:exon

LOC115615365
type: Exon
subclass of: SO_0000147
RO_0002162: 2489341
gene: LOC115615365
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC115615365
subclass of: SO_0000673
so part of: LOC115615365
location: complement(213393..214020)
location: region:213393-214020:-1
so has part: feature:213393-214020:-1:exon

position:213393:-1
position: 213393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213393-214020:-1:exon

LOC115615256
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115615256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 237194..239199
location: region:237194-239199:1
so has part: feature:237194-239199:1:exon
subclass of: SO_0000011

115615256
type: Gene
SIO_000068: ncbigene

position:237194:1
position: 237194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239199:1
position: 239199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237194-239199:1:exon

LOC115615256
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2489341
nc RNA class: lncRNA
gene: LOC115615256
product: uncharacterized LOC115615256
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_003993999.1
SIO_010081: LOC115615256
subclass of: SO_0000673
so part of: LOC115615256
location: join(237194..238761,239086..239199)
location: region:237194-239199:1
so has part: feature:237194-238761:1:exon
so has part: feature:239086-239199:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237194-238761:1:exon

position:238761:1
position: 238761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:239086-239199:1:exon

position:239086:1
position: 239086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115615255
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115615255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(243839..257302)
location: region:243839-257302:-1
so has part: feature:243839-257302:-1:exon
subclass of: SO_0000010

115615255
type: Gene
SIO_000068: ncbigene

position:243839:-1
position: 243839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257302:-1
position: 257302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243839-257302:-1:exon

LOC115615255
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115615255
product: E3 ubiquitin-protein ligase RBBP6-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030503183.1
SIO_010081: LOC115615255
subclass of: SO_0000673
so part of: LOC115615255
location: complement(join(243839..244042,244136..244214,244295..244477,244904..245007,245749..245918,246473..246612,247634..247730,247844..247932,250173..250253,251543..251579,252233..252274,253671..253767,254917..257302))
location: region:243839-257302:-1
so has part: feature:254917-257302:-1:exon
so has part: feature:253671-253767:-1:exon
so has part: feature:252233-252274:-1:exon
so has part: feature:251543-251579:-1:exon
so has part: feature:250173-250253:-1:exon
so has part: feature:247844-247932:-1:exon
so has part: feature:247634-247730:-1:exon
so has part: feature:246473-246612:-1:exon
so has part: feature:245749-245918:-1:exon
so has part: feature:244904-245007:-1:exon
so has part: feature:244295-244477:-1:exon
so has part: feature:244136-244214:-1:exon
so has part: feature:243839-244042:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:254917-257302:-1:exon

position:254917:-1
position: 254917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:253671-253767:-1:exon

position:253671:-1
position: 253671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253767:-1
position: 253767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:252233-252274:-1:exon

position:252233:-1
position: 252233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252274:-1
position: 252274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:251543-251579:-1:exon

position:251543:-1
position: 251543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251579:-1
position: 251579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:250173-250253:-1:exon

position:250173:-1
position: 250173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250253:-1
position: 250253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:247844-247932:-1:exon

position:247844:-1
position: 247844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247932:-1
position: 247932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:247634-247730:-1:exon

position:247634:-1
position: 247634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247730:-1
position: 247730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:246473-246612:-1:exon

position:246473:-1
position: 246473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246612:-1
position: 246612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:245749-245918:-1:exon

position:245749:-1
position: 245749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245918:-1
position: 245918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:244904-245007:-1:exon

position:244904:-1
position: 244904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245007:-1
position: 245007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:244295-244477:-1:exon

position:244295:-1
position: 244295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244477:-1
position: 244477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:244136-244214:-1:exon

position:244136:-1
position: 244136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244214:-1
position: 244214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:243839-244042:-1:exon

position:244042:-1
position: 244042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115615255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115615255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RBBP6-like
translation: MSCIHYKFSSKLSYDTVTFNGLHISLCDLKCRIMFREKLKAANCDLQITNAQTKEEYTKDALIPRNSLVVVKRIPVGGVKATSKTDVTAPQSHKISGAASFRSRTEPVSRTSEANLNMCLFFAERMDDKSSASVSLNQLLKTANLAEANASEEDKIKAMMIQSCHEYDPVNYVKKPLGTPPPSYTCFRCGKPGHYRKNCPINGDKNVESVPRLKRSTGIPRSFMIEVKDPNTKGAMLTNTGKYAIPIINAEAYARGKRERPPFLPEEPSSSSSDGPIPDELLCLICKDIMTDAAILPCCGSSYCDECIRTALLESEEHTCPTCHQTDVSLDALTANQNLRQAVNNFKNGAGYTKRLRRQIQQQQPPPPPPPLRTVIHPAALVTAAELPQSSSLSISSLLEEKGRQVPVRRQLAPPSLLGSQGQSILTTGPLRRDSTIHSAGARPGREL
SIO_010081: LOC115615255
subclass of: SO_0000673
so part of: LOC115615255
location: complement(join(243981..244042,244136..244214,244295..244477,244904..245007,245749..245918,246473..246612,247634..247730,247844..247932,250173..250253,251543..251579,252233..252274,253671..253767,254917..255082))
location: region:243981-255082:-1
so has part: feature:254917-255082:-1:exon
so has part: feature:253671-253767:-1:exon
so has part: feature:252233-252274:-1:exon
so has part: feature:251543-251579:-1:exon
so has part: feature:250173-250253:-1:exon
so has part: feature:247844-247932:-1:exon
so has part: feature:247634-247730:-1:exon
so has part: feature:246473-246612:-1:exon
so has part: feature:245749-245918:-1:exon
so has part: feature:244904-245007:-1:exon
so has part: feature:244295-244477:-1:exon
so has part: feature:244136-244214:-1:exon
so has part: feature:243981-244042:-1:exon

XP_030359043.1
type: Protein
SIO_000068: ncbiprotein

position:243981:-1
position: 243981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255082:-1
position: 255082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254917-255082:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:253671-253767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:252233-252274:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251543-251579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250173-250253:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247844-247932:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:247634-247730:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:246473-246612:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:245749-245918:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:244904-245007:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:244295-244477:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:244136-244214:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:243981-244042:-1:exon

LOC115615257
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115615257
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 262902..267066
location: region:262902-267066:1
so has part: feature:262902-267066:1:exon
subclass of: SO_0000011

115615257
type: Gene
SIO_000068: ncbigene

position:262902:1
position: 262902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267066:1
position: 267066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262902-267066:1:exon

LOC115615257
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2489341
nc RNA class: lncRNA
gene: LOC115615257
product: uncharacterized LOC115615257
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003994000.1
SIO_010081: LOC115615257
subclass of: SO_0000673
so part of: LOC115615257
location: join(262902..264443,266178..266289,266690..267066)
location: region:262902-267066:1
so has part: feature:262902-264443:1:exon
so has part: feature:266178-266289:1:exon
so has part: feature:266690-267066:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:262902-264443:1:exon

position:264443:1
position: 264443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:266178-266289:1:exon

position:266178:1
position: 266178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266289:1
position: 266289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:266690-267066:1:exon

position:266690:1
position: 266690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MYBL2
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: MYBL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(274937..290580)
location: region:274937-290580:-1
so has part: feature:274937-290580:-1:exon
subclass of: SO_0000010

115615325
type: Gene
SIO_000068: ncbigene

position:274937:-1
position: 274937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290580:-1
position: 290580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274937-290580:-1:exon

MYBL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: MYBL2
product: MYB proto-oncogene like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 32 ESTs, 136 long SRA reads, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030503375.1
SIO_010081: MYBL2
subclass of: SO_0000673
so part of: MYBL2
location: complement(join(274937..275689,277465..277611,278038..278154,278693..278806,279443..279542,280523..280662,282821..283204,284449..284718,285484..285640,285800..286020,288082..288174,288539..288610,289726..289819,290485..290580))
location: region:274937-290580:-1
so has part: feature:290485-290580:-1:exon
so has part: feature:289726-289819:-1:exon
so has part: feature:288539-288610:-1:exon
so has part: feature:288082-288174:-1:exon
so has part: feature:285800-286020:-1:exon
so has part: feature:285484-285640:-1:exon
so has part: feature:284449-284718:-1:exon
so has part: feature:282821-283204:-1:exon
so has part: feature:280523-280662:-1:exon
so has part: feature:279443-279542:-1:exon
so has part: feature:278693-278806:-1:exon
so has part: feature:278038-278154:-1:exon
so has part: feature:277465-277611:-1:exon
so has part: feature:274937-275689:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:290485-290580:-1:exon

position:290485:-1
position: 290485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:289726-289819:-1:exon

position:289726:-1
position: 289726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289819:-1
position: 289819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:288539-288610:-1:exon

position:288539:-1
position: 288539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288610:-1
position: 288610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:288082-288174:-1:exon

position:288082:-1
position: 288082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288174:-1
position: 288174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:285800-286020:-1:exon

position:285800:-1
position: 285800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286020:-1
position: 286020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:285484-285640:-1:exon

position:285484:-1
position: 285484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285640:-1
position: 285640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:284449-284718:-1:exon

position:284449:-1
position: 284449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284718:-1
position: 284718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:282821-283204:-1:exon

position:282821:-1
position: 282821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283204:-1
position: 283204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:280523-280662:-1:exon

position:280523:-1
position: 280523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280662:-1
position: 280662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:279443-279542:-1:exon

position:279443:-1
position: 279443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279542:-1
position: 279542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:278693-278806:-1:exon

position:278693:-1
position: 278693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278806:-1
position: 278806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:278038-278154:-1:exon

position:278038:-1
position: 278038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278154:-1
position: 278154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:277465-277611:-1:exon

position:277465:-1
position: 277465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277611:-1
position: 277611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:274937-275689:-1:exon

position:275689:-1
position: 275689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MYBL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: MYBL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb-related protein B
translation: MSRRGRGEDQDELHYQDTDQDVPEQRDGRCKVKWTQEEDEQLKMLVRHYGQNDWKFLASHFPNRSDQQCQYRWLRVLNPDLVKGPWTKEEDQKVIELVKKYGTKQWTLIAKHLKGRLGKQCRERWHNHLNPEVKKSSWTEEEDRIIFEAHKVLGNRWAEIAKLLPGRTDNAVKNHWNSTIKRKVDTGGFLNETKESRSLYLLVEVDEKERQSQTKAGSQSILPNWPVDISEIKEEDVSDEEVTGVQELPSELPATELAEHNAAGTPDDAVPEDASSFVTSPYKWVVEAANYLYPTSGPAFSEALDMIESDPDGWCDLTQFDLPEEPSASSSSSSSPVRQTPSKPTSSLPNVTEYRLDGHTISDLSKSSKGELIPISPHAEVSFGTPPSVLKRQKKRKITLSPVTENVTSTSLSFLDSCNSMTPKSTPVKTLPFSPSQFLNFWTKQDTLELENPSLTSTPVCSQKVIVTTPLHRDKTPLLQKNSAFVTPDQKYVVDNTPHTPTPFKNALEKYGPIRPLPQTPHLEEDLKEVLRSEAGIELIIEDDVKPEKQRRKQGLRRSPIKKVRKSLALDIMDEDMTQNMPALPKTVCFKRTQPVNFLARSLNLSSSSRKNDSGLLNRAFVQVQPEKMSYRKMPSHFRPPAPMTRAWKVVACGGTRDQLFMQEKARQFLGMLKQTHTSRTLILS
SIO_010081: MYBL2
subclass of: SO_0000673
so part of: MYBL2
location: complement(join(275561..275689,277465..277611,278038..278154,278693..278806,279443..279542,280523..280662,282821..283204,284449..284718,285484..285640,285800..286020,288082..288174,288539..288610,289726..289819,290485..290504))
location: region:275561-290504:-1
so has part: feature:290485-290504:-1:exon
so has part: feature:289726-289819:-1:exon
so has part: feature:288539-288610:-1:exon
so has part: feature:288082-288174:-1:exon
so has part: feature:285800-286020:-1:exon
so has part: feature:285484-285640:-1:exon
so has part: feature:284449-284718:-1:exon
so has part: feature:282821-283204:-1:exon
so has part: feature:280523-280662:-1:exon
so has part: feature:279443-279542:-1:exon
so has part: feature:278693-278806:-1:exon
so has part: feature:278038-278154:-1:exon
so has part: feature:277465-277611:-1:exon
so has part: feature:275561-275689:-1:exon

XP_030359235.1
type: Protein
SIO_000068: ncbiprotein

position:275561:-1
position: 275561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290504:-1
position: 290504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290485-290504:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:289726-289819:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:288539-288610:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288082-288174:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285800-286020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285484-285640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:284449-284718:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:282821-283204:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280523-280662:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:279443-279542:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:278693-278806:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:278038-278154:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:277465-277611:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:275561-275689:-1:exon

IFT52
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: IFT52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(296507..310677)
location: region:296507-310677:-1
so has part: feature:296507-310677:-1:exon
subclass of: SO_0000010

115615164
type: Gene
SIO_000068: ncbigene

position:296507:-1
position: 296507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310677:-1
position: 310677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296507-310677:-1:exon

IFT52
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: IFT52
product: intraflagellar transport 52, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 194 long SRA reads, 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030503017.1
SIO_010081: IFT52
subclass of: SO_0000673
so part of: IFT52
location: complement(join(296507..297568,298114..298259,298778..298886,300122..300209,301190..301344,302060..302128,302899..302985,306259..306385,307292..307363,307446..307521,308456..308585,308832..308919,310371..310677))
location: region:296507-310677:-1
so has part: feature:310371-310677:-1:exon
so has part: feature:308832-308919:-1:exon
so has part: feature:308456-308585:-1:exon
so has part: feature:307446-307521:-1:exon
so has part: feature:307292-307363:-1:exon
so has part: feature:306259-306385:-1:exon
so has part: feature:302899-302985:-1:exon
so has part: feature:302060-302128:-1:exon
so has part: feature:301190-301344:-1:exon
so has part: feature:300122-300209:-1:exon
so has part: feature:298778-298886:-1:exon
so has part: feature:298114-298259:-1:exon
so has part: feature:296507-297568:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:310371-310677:-1:exon

position:310371:-1
position: 310371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:308832-308919:-1:exon

position:308832:-1
position: 308832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308919:-1
position: 308919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:308456-308585:-1:exon

position:308456:-1
position: 308456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308585:-1
position: 308585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:307446-307521:-1:exon

position:307446:-1
position: 307446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307521:-1
position: 307521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:307292-307363:-1:exon

position:307292:-1
position: 307292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307363:-1
position: 307363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:306259-306385:-1:exon

position:306259:-1
position: 306259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306385:-1
position: 306385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:302899-302985:-1:exon

position:302899:-1
position: 302899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302985:-1
position: 302985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:302060-302128:-1:exon

position:302060:-1
position: 302060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302128:-1
position: 302128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:301190-301344:-1:exon

position:301190:-1
position: 301190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301344:-1
position: 301344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:300122-300209:-1:exon

position:300122:-1
position: 300122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300209:-1
position: 300209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:298778-298886:-1:exon

position:298778:-1
position: 298778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298886:-1
position: 298886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:298114-298259:-1:exon

position:298114:-1
position: 298114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298259:-1
position: 298259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:296507-297568:-1:exon

position:297568:-1
position: 297568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IFT52
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: IFT52
product: intraflagellar transport 52, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 102 long SRA reads, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030503018.1
SIO_010081: IFT52
subclass of: SO_0000673
so part of: IFT52
location: complement(join(296507..297568,298778..298886,300122..300209,301190..301344,302060..302128,302899..302985,306259..306385,307292..307363,307446..307521,308456..308585,308832..308919,310371..310673))
location: region:296507-310673:-1
so has part: feature:310371-310673:-1:exon
so has part: feature:308832-308919:-1:exon
so has part: feature:308456-308585:-1:exon
so has part: feature:307446-307521:-1:exon
so has part: feature:307292-307363:-1:exon
so has part: feature:306259-306385:-1:exon
so has part: feature:302899-302985:-1:exon
so has part: feature:302060-302128:-1:exon
so has part: feature:301190-301344:-1:exon
so has part: feature:300122-300209:-1:exon
so has part: feature:298778-298886:-1:exon
so has part: feature:296507-297568:-1:exon

position:310673:-1
position: 310673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310371-310673:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:308832-308919:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308456-308585:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:307446-307521:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:307292-307363:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:306259-306385:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:302899-302985:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:302060-302128:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:301190-301344:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:300122-300209:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:298778-298886:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:296507-297568:-1:exon

IFT52
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: IFT52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 52 homolog isoform X1
translation: MERGLRNAIVFNASKGEAFTLASSYKSLRKRLRGNWKVQSLKDEITSEKLFGVKLWITAGPREKFSAAEFSLLKKFLEDGGAILVMLREGGESRYGTNINFLLEEYGIVFNNDAVVRNVYYKYHHPKEALISDGVLNRSISEAARKTVLEATDEDGSGRDSQALTFVYPFGATLNVMKPAVAILSTGSVCFPLNRPILAFYQHENQGGKMAALGSSHMFSDQYLDKEENGKIMDVLFQWLTTSDIHLNQMDKEDPEISDYTMLPDTAALSEQLRVCLQEGDENPRDFTKLFDMSLYQMDTTALPSVIKAYEQLNVKHEPLQLIQPQFETPLPVLQPAVFPPAFRELPPPPLELFDLDETFSSEKARLAEITNKCTDDDLEFYVRKCGDILGVTSKLPKEKQDAKHILEHIFFQVVEFKKLNQEHDTDTSEAGFQNGS
SIO_010081: IFT52
subclass of: SO_0000673
so part of: IFT52
location: complement(join(297521..297568,298114..298259,298778..298886,300122..300209,301190..301344,302060..302128,302899..302985,306259..306385,307292..307363,307446..307521,308456..308585,308832..308919,310371..310489))
location: region:297521-310489:-1
so has part: feature:310371-310489:-1:exon
so has part: feature:308832-308919:-1:exon
so has part: feature:308456-308585:-1:exon
so has part: feature:307446-307521:-1:exon
so has part: feature:307292-307363:-1:exon
so has part: feature:306259-306385:-1:exon
so has part: feature:302899-302985:-1:exon
so has part: feature:302060-302128:-1:exon
so has part: feature:301190-301344:-1:exon
so has part: feature:300122-300209:-1:exon
so has part: feature:298778-298886:-1:exon
so has part: feature:298114-298259:-1:exon
so has part: feature:297521-297568:-1:exon

XP_030358877.1
type: Protein
SIO_000068: ncbiprotein

position:297521:-1
position: 297521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310489:-1
position: 310489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310371-310489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:308832-308919:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308456-308585:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:307446-307521:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:307292-307363:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:306259-306385:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:302899-302985:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:302060-302128:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:301190-301344:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:300122-300209:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:298778-298886:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:298114-298259:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:297521-297568:-1:exon

IFT52
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: IFT52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 52 homolog isoform X2
translation: MERGLRNAIVFNASKGEAFTLASSYKSLRKRLRGNWKVQSLKDEITSEKLFGVKLWITAGPREKFSAAEFSLLKKFLEDGGAILVMLREGGESRYGTNINFLLEEYGIVFNNDAVVRNVYYKYHHPKEALISDGVLNRSISEAARKTVLEATDEDGSGRDSQALTFVYPFGATLNVMKPAVAILSTGSVCFPLNRPILAFYQHENQGGKMAALGSSHMFSDQYLDKEENGKIMDVLFQWLTTSDIHLNQMDKEDPEISDYTMLPDTAALSEQLRVCLQEGDENPRDFTKLFDMSLYQMDTTALPSVIKAYEQLNVKHEPLQLIQPQFETPLPVLQPAVFPPAFRELPPPPLELFDLDETFSSEKARLAEITNK
SIO_010081: IFT52
subclass of: SO_0000673
so part of: IFT52
location: complement(join(297567..297568,298778..298886,300122..300209,301190..301344,302060..302128,302899..302985,306259..306385,307292..307363,307446..307521,308456..308585,308832..308919,310371..310489))
location: region:297567-310489:-1
so has part: feature:310371-310489:-1:exon
so has part: feature:308832-308919:-1:exon
so has part: feature:308456-308585:-1:exon
so has part: feature:307446-307521:-1:exon
so has part: feature:307292-307363:-1:exon
so has part: feature:306259-306385:-1:exon
so has part: feature:302899-302985:-1:exon
so has part: feature:302060-302128:-1:exon
so has part: feature:301190-301344:-1:exon
so has part: feature:300122-300209:-1:exon
so has part: feature:298778-298886:-1:exon
so has part: feature:297567-297568:-1:exon

XP_030358878.1
type: Protein
SIO_000068: ncbiprotein

position:297567:-1
position: 297567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310371-310489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:308832-308919:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308456-308585:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:307446-307521:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:307292-307363:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:306259-306385:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:302899-302985:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:302060-302128:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:301190-301344:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:300122-300209:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:298778-298886:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:297567-297568:-1:exon

SGK2
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: SGK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(311105..332214)
location: region:311105-332214:-1
so has part: feature:311105-332214:-1:exon
subclass of: SO_0000010

115615166
type: Gene
SIO_000068: ncbigene

position:311105:-1
position: 311105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332214:-1
position: 332214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311105-332214:-1:exon

SGK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: SGK2
product: serum/glucocorticoid regulated kinase 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 71 long SRA reads, 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030503023.1
SIO_010081: SGK2
subclass of: SO_0000673
so part of: SGK2
location: complement(join(311105..312355,312574..312663,313044..313199,313571..313666,315351..315437,316007..316043,316577..316689,318143..318274,318586..318669,319272..319329,319926..319975,320820..320877,322086..322155,327742..327844,328347..328469,332138..332214))
location: region:311105-332214:-1
so has part: feature:332138-332214:-1:exon
so has part: feature:328347-328469:-1:exon
so has part: feature:327742-327844:-1:exon
so has part: feature:322086-322155:-1:exon
so has part: feature:320820-320877:-1:exon
so has part: feature:319926-319975:-1:exon
so has part: feature:319272-319329:-1:exon
so has part: feature:318586-318669:-1:exon
so has part: feature:318143-318274:-1:exon
so has part: feature:316577-316689:-1:exon
so has part: feature:316007-316043:-1:exon
so has part: feature:315351-315437:-1:exon
so has part: feature:313571-313666:-1:exon
so has part: feature:313044-313199:-1:exon
so has part: feature:312574-312663:-1:exon
so has part: feature:311105-312355:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:332138-332214:-1:exon

position:332138:-1
position: 332138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:328347-328469:-1:exon

position:328347:-1
position: 328347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328469:-1
position: 328469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:327742-327844:-1:exon

position:327742:-1
position: 327742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327844:-1
position: 327844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:322086-322155:-1:exon

position:322086:-1
position: 322086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322155:-1
position: 322155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:320820-320877:-1:exon

position:320820:-1
position: 320820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320877:-1
position: 320877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:319926-319975:-1:exon

position:319926:-1
position: 319926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319975:-1
position: 319975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:319272-319329:-1:exon

position:319272:-1
position: 319272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319329:-1
position: 319329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:318586-318669:-1:exon

position:318586:-1
position: 318586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318669:-1
position: 318669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:318143-318274:-1:exon

position:318143:-1
position: 318143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318274:-1
position: 318274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:316577-316689:-1:exon

position:316577:-1
position: 316577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316689:-1
position: 316689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:316007-316043:-1:exon

position:316007:-1
position: 316007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316043:-1
position: 316043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:315351-315437:-1:exon

position:315351:-1
position: 315351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315437:-1
position: 315437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:313571-313666:-1:exon

position:313571:-1
position: 313571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313666:-1
position: 313666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:313044-313199:-1:exon

position:313044:-1
position: 313044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313199:-1
position: 313199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:312574-312663:-1:exon

position:312574:-1
position: 312574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312663:-1
position: 312663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:311105-312355:-1:exon

position:312355:-1
position: 312355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SGK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: SGK2
product: serum/glucocorticoid regulated kinase 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 70 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030503022.1
SIO_010081: SGK2
subclass of: SO_0000673
so part of: SGK2
location: complement(join(311105..312355,312574..312663,313044..313199,315351..315437,316007..316043,316577..316689,318143..318274,318586..318669,319272..319329,319926..319975,320820..320877,322086..322155,327692..327844,328347..328469,332138..332214))
location: region:311105-332214:-1
so has part: feature:332138-332214:-1:exon
so has part: feature:328347-328469:-1:exon
so has part: feature:327692-327844:-1:exon
so has part: feature:322086-322155:-1:exon
so has part: feature:320820-320877:-1:exon
so has part: feature:319926-319975:-1:exon
so has part: feature:319272-319329:-1:exon
so has part: feature:318586-318669:-1:exon
so has part: feature:318143-318274:-1:exon
so has part: feature:316577-316689:-1:exon
so has part: feature:316007-316043:-1:exon
so has part: feature:315351-315437:-1:exon
so has part: feature:313044-313199:-1:exon
so has part: feature:312574-312663:-1:exon
so has part: feature:311105-312355:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:332138-332214:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328347-328469:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327692-327844:-1:exon

position:327692:-1
position: 327692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:322086-322155:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:320820-320877:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:319926-319975:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:319272-319329:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:318586-318669:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:318143-318274:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:316577-316689:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:316007-316043:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:315351-315437:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:313044-313199:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:312574-312663:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:311105-312355:-1:exon

SGK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: SGK2
product: serum/glucocorticoid regulated kinase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 71 long SRA reads, 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030503019.1
SIO_010081: SGK2
subclass of: SO_0000673
so part of: SGK2
location: complement(join(311105..312355,312574..312663,313044..313199,313571..313666,315351..315437,316007..316043,316577..316689,318143..318274,318586..318669,319272..319329,319926..319975,320820..320877,322086..322155,327692..327844,328347..328469,332138..332214))
location: region:311105-332214:-1
so has part: feature:332138-332214:-1:exon
so has part: feature:328347-328469:-1:exon
so has part: feature:327692-327844:-1:exon
so has part: feature:322086-322155:-1:exon
so has part: feature:320820-320877:-1:exon
so has part: feature:319926-319975:-1:exon
so has part: feature:319272-319329:-1:exon
so has part: feature:318586-318669:-1:exon
so has part: feature:318143-318274:-1:exon
so has part: feature:316577-316689:-1:exon
so has part: feature:316007-316043:-1:exon
so has part: feature:315351-315437:-1:exon
so has part: feature:313571-313666:-1:exon
so has part: feature:313044-313199:-1:exon
so has part: feature:312574-312663:-1:exon
so has part: feature:311105-312355:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:332138-332214:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328347-328469:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327692-327844:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:322086-322155:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:320820-320877:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:319926-319975:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:319272-319329:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:318586-318669:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:318143-318274:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:316577-316689:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:316007-316043:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:315351-315437:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:313571-313666:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:313044-313199:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:312574-312663:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:311105-312355:-1:exon

SGK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: SGK2
product: serum/glucocorticoid regulated kinase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 71 long SRA reads, 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030503020.1
SIO_010081: SGK2
subclass of: SO_0000673
so part of: SGK2
location: complement(join(311105..312355,312574..312663,313044..313199,313571..313666,315351..315437,316007..316043,316577..316689,318143..318274,318586..318669,319272..319329,319926..319975,320820..320877,322086..322155,327692..327844,332138..332205))
location: region:311105-332205:-1
so has part: feature:332138-332205:-1:exon
so has part: feature:327692-327844:-1:exon
so has part: feature:322086-322155:-1:exon
so has part: feature:320820-320877:-1:exon
so has part: feature:319926-319975:-1:exon
so has part: feature:319272-319329:-1:exon
so has part: feature:318586-318669:-1:exon
so has part: feature:318143-318274:-1:exon
so has part: feature:316577-316689:-1:exon
so has part: feature:316007-316043:-1:exon
so has part: feature:315351-315437:-1:exon
so has part: feature:313571-313666:-1:exon
so has part: feature:313044-313199:-1:exon
so has part: feature:312574-312663:-1:exon
so has part: feature:311105-312355:-1:exon

position:332205:-1
position: 332205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332138-332205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327692-327844:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:322086-322155:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:320820-320877:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:319926-319975:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:319272-319329:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:318586-318669:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:318143-318274:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:316577-316689:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:316007-316043:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:315351-315437:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:313571-313666:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:313044-313199:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:312574-312663:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:311105-312355:-1:exon

SGK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: SGK2
product: serum/glucocorticoid regulated kinase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 71 long SRA reads, 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030503021.1
SIO_010081: SGK2
subclass of: SO_0000673
so part of: SGK2
location: complement(join(311105..312355,312574..312663,313044..313199,313571..313666,315351..315437,316007..316043,316577..316689,318143..318274,318586..318669,319272..319329,319926..319975,320820..320877,321868..321929))
location: region:311105-321929:-1
so has part: feature:321868-321929:-1:exon
so has part: feature:320820-320877:-1:exon
so has part: feature:319926-319975:-1:exon
so has part: feature:319272-319329:-1:exon
so has part: feature:318586-318669:-1:exon
so has part: feature:318143-318274:-1:exon
so has part: feature:316577-316689:-1:exon
so has part: feature:316007-316043:-1:exon
so has part: feature:315351-315437:-1:exon
so has part: feature:313571-313666:-1:exon
so has part: feature:313044-313199:-1:exon
so has part: feature:312574-312663:-1:exon
so has part: feature:311105-312355:-1:exon

position:321929:-1
position: 321929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321868-321929:-1:exon

position:321868:-1
position: 321868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:320820-320877:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:319926-319975:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:319272-319329:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:318586-318669:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:318143-318274:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:316577-316689:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:316007-316043:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315351-315437:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:313571-313666:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:313044-313199:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:312574-312663:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:311105-312355:-1:exon

SGK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: SGK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Sgk2 isoform X3
translation: MYVAWMEPSSSALGKTKELIKHSRERIGRTIKASGSRLCSYAERVAFLMDRSRSPDKSIQPPTPTDNINLGPSANPNAKPTDFDFLKVIGKGSFGKVLLAKRKCDGTFYAVKVLHKKTILKKKEQTHIMAERNVLLKNVKHPFLVGLHYSFQTSEKLYFVLDYVNGGELFFHLQRERCFREPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDCQGHIVLTDFGLCKEGMEQEETTSTFCGTPEPPFYSRDVSQMYDNILHKPLQIQGSKTVAACDILQGLLHKDQKRRLGAKSDFLEIKNHVFFSPVNWDDLYHKRITPPFNPNVAGPADLRHFDPEFTQEAVSTSITHTPDLAASSSSASDAFLGFSYAPTEEGI
SIO_010081: SGK2
subclass of: SO_0000673
so part of: SGK2
location: complement(join(312200..312355,312574..312663,313044..313199,315351..315437,316007..316043,316577..316689,318143..318274,318586..318669,319272..319329,319926..319975,320820..320877,322086..322155,327692..327743))
location: region:312200-327743:-1
so has part: feature:327692-327743:-1:exon
so has part: feature:322086-322155:-1:exon
so has part: feature:320820-320877:-1:exon
so has part: feature:319926-319975:-1:exon
so has part: feature:319272-319329:-1:exon
so has part: feature:318586-318669:-1:exon
so has part: feature:318143-318274:-1:exon
so has part: feature:316577-316689:-1:exon
so has part: feature:316007-316043:-1:exon
so has part: feature:315351-315437:-1:exon
so has part: feature:313044-313199:-1:exon
so has part: feature:312574-312663:-1:exon
so has part: feature:312200-312355:-1:exon

XP_030358882.1
type: Protein
SIO_000068: ncbiprotein

position:312200:-1
position: 312200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327743:-1
position: 327743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327692-327743:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322086-322155:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:320820-320877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:319926-319975:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:319272-319329:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:318586-318669:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:318143-318274:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:316577-316689:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:316007-316043:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315351-315437:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:313044-313199:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:312574-312663:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:312200-312355:-1:exon

SGK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: SGK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Sgk2 isoform X1
translation: MYVAWMEPSSSALGKTKELIKHSRERIGRTIKASGSRLCSYAERVAFLMDRSRSPDKSIQPPTPTDNINLGPSANPNAKPTDFDFLKVIGKGSFGKVLLAKRKCDGTFYAVKVLHKKTILKKKEQTHIMAERNVLLKNVKHPFLVGLHYSFQTSEKLYFVLDYVNGGELFFHLQRERCFREPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDCQGHIVLTDFGLCKEGMEQEETTSTFCGTPEYLAPEVLKKQPYDRTVDWWCLGAVLYEMLFGLPPFYSRDVSQMYDNILHKPLQIQGSKTVAACDILQGLLHKDQKRRLGAKSDFLEIKNHVFFSPVNWDDLYHKRITPPFNPNVAGPADLRHFDPEFTQEAVSTSITHTPDLAASSSSASDAFLGFSYAPTEEGI
SIO_010081: SGK2
subclass of: SO_0000673
so part of: SGK2
location: complement(join(312200..312355,312574..312663,313044..313199,313571..313666,315351..315437,316007..316043,316577..316689,318143..318274,318586..318669,319272..319329,319926..319975,320820..320877,322086..322155,327692..327743))
location: region:312200-327743:-1
so has part: feature:327692-327743:-1:exon
so has part: feature:322086-322155:-1:exon
so has part: feature:320820-320877:-1:exon
so has part: feature:319926-319975:-1:exon
so has part: feature:319272-319329:-1:exon
so has part: feature:318586-318669:-1:exon
so has part: feature:318143-318274:-1:exon
so has part: feature:316577-316689:-1:exon
so has part: feature:316007-316043:-1:exon
so has part: feature:315351-315437:-1:exon
so has part: feature:313571-313666:-1:exon
so has part: feature:313044-313199:-1:exon
so has part: feature:312574-312663:-1:exon
so has part: feature:312200-312355:-1:exon

XP_030358879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327692-327743:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322086-322155:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:320820-320877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:319926-319975:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:319272-319329:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:318586-318669:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:318143-318274:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:316577-316689:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:316007-316043:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315351-315437:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:313571-313666:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:313044-313199:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:312574-312663:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:312200-312355:-1:exon

SGK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: SGK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Sgk2 isoform X1
translation: MYVAWMEPSSSALGKTKELIKHSRERIGRTIKASGSRLCSYAERVAFLMDRSRSPDKSIQPPTPTDNINLGPSANPNAKPTDFDFLKVIGKGSFGKVLLAKRKCDGTFYAVKVLHKKTILKKKEQTHIMAERNVLLKNVKHPFLVGLHYSFQTSEKLYFVLDYVNGGELFFHLQRERCFREPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDCQGHIVLTDFGLCKEGMEQEETTSTFCGTPEYLAPEVLKKQPYDRTVDWWCLGAVLYEMLFGLPPFYSRDVSQMYDNILHKPLQIQGSKTVAACDILQGLLHKDQKRRLGAKSDFLEIKNHVFFSPVNWDDLYHKRITPPFNPNVAGPADLRHFDPEFTQEAVSTSITHTPDLAASSSSASDAFLGFSYAPTEEGI
SIO_010081: SGK2
subclass of: SO_0000673
so part of: SGK2
location: complement(join(312200..312355,312574..312663,313044..313199,313571..313666,315351..315437,316007..316043,316577..316689,318143..318274,318586..318669,319272..319329,319926..319975,320820..320877,322086..322155,327692..327743))
location: region:312200-327743:-1
so has part: feature:327692-327743:-1:exon
so has part: feature:322086-322155:-1:exon
so has part: feature:320820-320877:-1:exon
so has part: feature:319926-319975:-1:exon
so has part: feature:319272-319329:-1:exon
so has part: feature:318586-318669:-1:exon
so has part: feature:318143-318274:-1:exon
so has part: feature:316577-316689:-1:exon
so has part: feature:316007-316043:-1:exon
so has part: feature:315351-315437:-1:exon
so has part: feature:313571-313666:-1:exon
so has part: feature:313044-313199:-1:exon
so has part: feature:312574-312663:-1:exon
so has part: feature:312200-312355:-1:exon

XP_030358880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327692-327743:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322086-322155:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:320820-320877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:319926-319975:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:319272-319329:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:318586-318669:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:318143-318274:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:316577-316689:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:316007-316043:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315351-315437:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:313571-313666:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:313044-313199:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:312574-312663:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:312200-312355:-1:exon

SGK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: SGK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Sgk2 isoform X2
translation: MGVQRGSTHSAERVAFLMDRSRSPDKSIQPPTPTDNINLGPSANPNAKPTDFDFLKVIGKGSFGKVLLAKRKCDGTFYAVKVLHKKTILKKKEQTHIMAERNVLLKNVKHPFLVGLHYSFQTSEKLYFVLDYVNGGELFFHLQRERCFREPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDCQGHIVLTDFGLCKEGMEQEETTSTFCGTPEYLAPEVLKKQPYDRTVDWWCLGAVLYEMLFGLPPFYSRDVSQMYDNILHKPLQIQGSKTVAACDILQGLLHKDQKRRLGAKSDFLEIKNHVFFSPVNWDDLYHKRITPPFNPNVAGPADLRHFDPEFTQEAVSTSITHTPDLAASSSSASDAFLGFSYAPTEEGI
SIO_010081: SGK2
subclass of: SO_0000673
so part of: SGK2
location: complement(join(312200..312355,312574..312663,313044..313199,313571..313666,315351..315437,316007..316043,316577..316689,318143..318274,318586..318669,319272..319329,319926..319975,320820..320877,321868..321896))
location: region:312200-321896:-1
so has part: feature:321868-321896:-1:exon
so has part: feature:320820-320877:-1:exon
so has part: feature:319926-319975:-1:exon
so has part: feature:319272-319329:-1:exon
so has part: feature:318586-318669:-1:exon
so has part: feature:318143-318274:-1:exon
so has part: feature:316577-316689:-1:exon
so has part: feature:316007-316043:-1:exon
so has part: feature:315351-315437:-1:exon
so has part: feature:313571-313666:-1:exon
so has part: feature:313044-313199:-1:exon
so has part: feature:312574-312663:-1:exon
so has part: feature:312200-312355:-1:exon

XP_030358881.1
type: Protein
SIO_000068: ncbiprotein

position:321896:-1
position: 321896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321868-321896:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:320820-320877:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:319926-319975:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:319272-319329:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:318586-318669:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:318143-318274:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:316577-316689:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:316007-316043:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315351-315437:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:313571-313666:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:313044-313199:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:312574-312663:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:312200-312355:-1:exon

SGK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: SGK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Sgk2 isoform X4
translation: MDRSRSPDKSIQPPTPTDNINLGPSANPNAKPTDFDFLKVIGKGSFGKVLLAKRKCDGTFYAVKVLHKKTILKKKEQTHIMAERNVLLKNVKHPFLVGLHYSFQTSEKLYFVLDYVNGGELFFHLQRERCFREPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDCQGHIVLTDFGLCKEGMEQEETTSTFCGTPEYLAPEVLKKQPYDRTVDWWCLGAVLYEMLFGLPPFYSRDVSQMYDNILHKPLQIQGSKTVAACDILQGLLHKDQKRRLGAKSDFLEIKNHVFFSPVNWDDLYHKRITPPFNPNVAGPADLRHFDPEFTQEAVSTSITHTPDLAASSSSASDAFLGFSYAPTEEGI
SIO_010081: SGK2
subclass of: SO_0000673
so part of: SGK2
location: complement(join(312200..312355,312574..312663,313044..313199,313571..313666,315351..315437,316007..316043,316577..316689,318143..318274,318586..318669,319272..319329,319926..319975,320820..320855))
location: region:312200-320855:-1
so has part: feature:320820-320855:-1:exon
so has part: feature:319926-319975:-1:exon
so has part: feature:319272-319329:-1:exon
so has part: feature:318586-318669:-1:exon
so has part: feature:318143-318274:-1:exon
so has part: feature:316577-316689:-1:exon
so has part: feature:316007-316043:-1:exon
so has part: feature:315351-315437:-1:exon
so has part: feature:313571-313666:-1:exon
so has part: feature:313044-313199:-1:exon
so has part: feature:312574-312663:-1:exon
so has part: feature:312200-312355:-1:exon

XP_030358883.1
type: Protein
SIO_000068: ncbiprotein

position:320855:-1
position: 320855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320820-320855:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:319926-319975:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:319272-319329:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:318586-318669:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:318143-318274:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:316577-316689:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:316007-316043:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:315351-315437:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313571-313666:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:313044-313199:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:312574-312663:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:312200-312355:-1:exon

SLC32A1
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: SLC32A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(335917..340280)
location: region:335917-340280:-1
so has part: feature:335917-340280:-1:exon
subclass of: SO_0000010

115615167
type: Gene
SIO_000068: ncbigene

position:335917:-1
position: 335917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340280:-1
position: 340280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335917-340280:-1:exon

SLC32A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: SLC32A1
product: solute carrier family 32 member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 315 long SRA reads, 16 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030503025.1
SIO_010081: SLC32A1
subclass of: SO_0000673
so part of: SLC32A1
location: complement(join(335917..338234,338890..340280))
location: region:335917-340280:-1
so has part: feature:338890-340280:-1:exon
so has part: feature:335917-338234:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:338890-340280:-1:exon

position:338890:-1
position: 338890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:335917-338234:-1:exon

position:338234:-1
position: 338234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC32A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: SLC32A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicular inhibitory amino acid transporter
translation: MATLLRSKLSNVATSVSNKSQAKMSGMFARMGFQAATDEEAVGFAHCDDLDMEHRQGLQMDILKSDSGEEGAELPLEGDIHYQRDGTGPPPPSATKEADGCPELSGQGKPKITAWEAGWNVTNAIQGMFVLGLPYAILHGGYLGLFLIIFAAVVCCYTGKILIACLYEENEDGEIVRVRDSYVDIANACCAPRFPTLGGRIVNVAQIIELVMTCILYVVVSGNLMYNSFPNLPVSQKSWSIIATAVLLPCAFLKNLKAVSKFSLLCTLAHFVINILVIAYCLSRARDWAWDKVKFYIDVKKFPISIGIIVFSYTSQIFLPSLEGNMQNPKEFHCMMNWTHIAACILKGLFALVAYLTWADETKEVITDNLPSTIRAVVNIFLVAKALLSYPLPFFAAVEVLERSLFQDGNRAFFPNCYGGDGRLKSWGLTLRCALVVFTLLMAIYVPHFALLMGLTGSLTGAGLCFLLPSLFHLKLLWRKLLWHHVFFDVAIFVIGGICSVSGFIHSLEGLIEAFRTNIED
SIO_010081: SLC32A1
subclass of: SO_0000673
so part of: SLC32A1
location: complement(join(337047..338234,338890..339267))
location: region:337047-339267:-1
so has part: feature:338890-339267:-1:exon
so has part: feature:337047-338234:-1:exon

XP_030358885.1
type: Protein
SIO_000068: ncbiprotein

position:337047:-1
position: 337047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339267:-1
position: 339267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338890-339267:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:337047-338234:-1:exon

LOC115615168
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115615168
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 340787..345724
location: region:340787-345724:1
so has part: feature:340787-345724:1:exon
subclass of: SO_0000011

115615168
type: Gene
SIO_000068: ncbigene

position:340787:1
position: 340787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345724:1
position: 345724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340787-345724:1:exon

LOC115615168
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2489341
nc RNA class: lncRNA
gene: LOC115615168
product: uncharacterized LOC115615168
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 79% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003993974.1
SIO_010081: LOC115615168
subclass of: SO_0000673
so part of: LOC115615168
location: join(340787..341193,341455..341546,344859..344974,345565..345724)
location: region:340787-345724:1
so has part: feature:340787-341193:1:exon
so has part: feature:341455-341546:1:exon
so has part: feature:344859-344974:1:exon
so has part: feature:345565-345724:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:340787-341193:1:exon

position:341193:1
position: 341193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:341455-341546:1:exon

position:341455:1
position: 341455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341546:1
position: 341546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:344859-344974:1:exon

position:344859:1
position: 344859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344974:1
position: 344974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:345565-345724:1:exon

position:345565:1
position: 345565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARHGAP40
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: ARHGAP40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(382474..428261)
location: region:382474-428261:-1
so has part: feature:382474-428261:-1:exon
subclass of: SO_0000010

115615328
type: Gene
SIO_000068: ncbigene

position:382474:-1
position: 382474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428261:-1
position: 428261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382474-428261:-1:exon

ARHGAP40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: ARHGAP40
product: Rho GTPase activating protein 40, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 46 long SRA reads, 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030503380.1
SIO_010081: ARHGAP40
subclass of: SO_0000673
so part of: ARHGAP40
location: complement(join(382474..385030,386447..386502,387621..387781,389871..390011,390271..390477,391616..391698,392862..393021,393310..393387,393501..393592,393962..394127,395262..395413,396074..396149,399378..399595,404628..404830,428073..428261))
location: region:382474-428261:-1
so has part: feature:428073-428261:-1:exon
so has part: feature:404628-404830:-1:exon
so has part: feature:399378-399595:-1:exon
so has part: feature:396074-396149:-1:exon
so has part: feature:395262-395413:-1:exon
so has part: feature:393962-394127:-1:exon
so has part: feature:393501-393592:-1:exon
so has part: feature:393310-393387:-1:exon
so has part: feature:392862-393021:-1:exon
so has part: feature:391616-391698:-1:exon
so has part: feature:390271-390477:-1:exon
so has part: feature:389871-390011:-1:exon
so has part: feature:387621-387781:-1:exon
so has part: feature:386447-386502:-1:exon
so has part: feature:382474-385030:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:428073-428261:-1:exon

position:428073:-1
position: 428073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:404628-404830:-1:exon

position:404628:-1
position: 404628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404830:-1
position: 404830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:399378-399595:-1:exon

position:399378:-1
position: 399378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399595:-1
position: 399595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:396074-396149:-1:exon

position:396074:-1
position: 396074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396149:-1
position: 396149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:395262-395413:-1:exon

position:395262:-1
position: 395262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395413:-1
position: 395413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:393962-394127:-1:exon

position:393962:-1
position: 393962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394127:-1
position: 394127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:393501-393592:-1:exon

position:393501:-1
position: 393501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393592:-1
position: 393592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:393310-393387:-1:exon

position:393310:-1
position: 393310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393387:-1
position: 393387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:392862-393021:-1:exon

position:392862:-1
position: 392862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393021:-1
position: 393021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:391616-391698:-1:exon

position:391616:-1
position: 391616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391698:-1
position: 391698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:390271-390477:-1:exon

position:390271:-1
position: 390271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390477:-1
position: 390477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:389871-390011:-1:exon

position:389871:-1
position: 389871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390011:-1
position: 390011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:387621-387781:-1:exon

position:387621:-1
position: 387621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387781:-1
position: 387781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:386447-386502:-1:exon

position:386447:-1
position: 386447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386502:-1
position: 386502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:382474-385030:-1:exon

position:385030:-1
position: 385030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGAP40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: ARHGAP40
product: Rho GTPase activating protein 40, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 44 long SRA reads, 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030503381.1
SIO_010081: ARHGAP40
subclass of: SO_0000673
so part of: ARHGAP40
location: complement(join(382474..385030,386447..386502,387621..387781,389871..390011,390271..390477,391616..391698,392862..393021,393310..393387,393501..393592,393962..394127,395262..395410,396074..396149,399378..399595,404628..404830,428073..428255))
location: region:382474-428255:-1
so has part: feature:428073-428255:-1:exon
so has part: feature:404628-404830:-1:exon
so has part: feature:399378-399595:-1:exon
so has part: feature:396074-396149:-1:exon
so has part: feature:395262-395410:-1:exon
so has part: feature:393962-394127:-1:exon
so has part: feature:393501-393592:-1:exon
so has part: feature:393310-393387:-1:exon
so has part: feature:392862-393021:-1:exon
so has part: feature:391616-391698:-1:exon
so has part: feature:390271-390477:-1:exon
so has part: feature:389871-390011:-1:exon
so has part: feature:387621-387781:-1:exon
so has part: feature:386447-386502:-1:exon
so has part: feature:382474-385030:-1:exon

position:428255:-1
position: 428255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428073-428255:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:404628-404830:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399378-399595:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:396074-396149:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:395262-395410:-1:exon

position:395410:-1
position: 395410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:393962-394127:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:393501-393592:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:393310-393387:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:392862-393021:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:391616-391698:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:390271-390477:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:389871-390011:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:387621-387781:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:386447-386502:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:382474-385030:-1:exon

ARHGAP40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: ARHGAP40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 40 isoform X2
translation: MSQLPPKSLLASPVSEGTNSRVESLDNLSMDSFWLEVENIKQSTEVEQEECSLADVKAQEEGEAEAEWLQDAGLSDLLGDCASENDNIVLLSTLTKTQAAAVQRRLDTYSRSRRRNKHAVRDVRDIFGVVNSEVTAAEKKESSPDQLWHSRQTSNIHRKTQDYSCTVRNPGKEEMFNMDVAYSEQAAVLLKGSFLSEPRKLKDGNALTKFKIPKGRLGVTRIGDLSAQDMKKIPTLALIELTALCDILGFELKRNKAAKLKTTDKRLFGVPLNTLLENDQKLLPNTKVPLILQALLSCLEKRGLETEGILRVSGSQTRIKSLEQKLERDFYTGLFHWDAVHQNDVSGLLKRFIRELPAPLLTAEYLPAFAAVQNIPDLKQRLQALNLLILILPEPNRNTLKALLEFLSKVVARENNNKMNLWNVSTVMAPNLFMHKGLPDKIPEGKEKQLAEGAADVVRMMIHYQDLLWTVSSFLVAQVRKLNESNSKRYQFCDKRIKHLLRKIHADKDKVKKNQAEPCKIVKVHASLLLKDPLEVHLNNATRVADVLRQFQKNMCQRGWNVVNTVNLLKCNNSMECTNLLLYEVGGNIGEHCLDPDTYLLDLYHINPHAEWIIKQNPSYPRVF
SIO_010081: ARHGAP40
subclass of: SO_0000673
so part of: ARHGAP40
location: complement(join(384924..385030,386447..386502,387621..387781,389871..390011,390271..390477,391616..391698,392862..393021,393310..393387,393501..393592,393962..394127,395262..395410,396074..396149,399378..399595,404628..404808))
location: region:384924-404808:-1
so has part: feature:404628-404808:-1:exon
so has part: feature:399378-399595:-1:exon
so has part: feature:396074-396149:-1:exon
so has part: feature:395262-395410:-1:exon
so has part: feature:393962-394127:-1:exon
so has part: feature:393501-393592:-1:exon
so has part: feature:393310-393387:-1:exon
so has part: feature:392862-393021:-1:exon
so has part: feature:391616-391698:-1:exon
so has part: feature:390271-390477:-1:exon
so has part: feature:389871-390011:-1:exon
so has part: feature:387621-387781:-1:exon
so has part: feature:386447-386502:-1:exon
so has part: feature:384924-385030:-1:exon

XP_030359241.1
type: Protein
SIO_000068: ncbiprotein

position:384924:-1
position: 384924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404808:-1
position: 404808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404628-404808:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:399378-399595:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:396074-396149:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:395262-395410:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:393962-394127:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:393501-393592:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:393310-393387:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:392862-393021:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:391616-391698:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:390271-390477:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:389871-390011:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:387621-387781:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:386447-386502:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:384924-385030:-1:exon

ARHGAP40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: ARHGAP40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 40 isoform X1
translation: MSQLPPKSLLASPVSEGTNSRVESLDNLSMDSFWLEVENIKQSTEVEQEECSLADVKAQEEGEAEAEWLQDAGLSDLLGDCASENDNIVLLSTLTKTQAAAVQRRLDTYSRSRRRNKHAVRDVRDIFGVVNSEVTAAEKKESSPDQLWHSRQTSNIHRTETQDYSCTVRNPGKEEMFNMDVAYSEQAAVLLKGSFLSEPRKLKDGNALTKFKIPKGRLGVTRIGDLSAQDMKKIPTLALIELTALCDILGFELKRNKAAKLKTTDKRLFGVPLNTLLENDQKLLPNTKVPLILQALLSCLEKRGLETEGILRVSGSQTRIKSLEQKLERDFYTGLFHWDAVHQNDVSGLLKRFIRELPAPLLTAEYLPAFAAVQNIPDLKQRLQALNLLILILPEPNRNTLKALLEFLSKVVARENNNKMNLWNVSTVMAPNLFMHKGLPDKIPEGKEKQLAEGAADVVRMMIHYQDLLWTVSSFLVAQVRKLNESNSKRYQFCDKRIKHLLRKIHADKDKVKKNQAEPCKIVKVHASLLLKDPLEVHLNNATRVADVLRQFQKNMCQRGWNVVNTVNLLKCNNSMECTNLLLYEVGGNIGEHCLDPDTYLLDLYHINPHAEWIIKQNPSYPRVF
SIO_010081: ARHGAP40
subclass of: SO_0000673
so part of: ARHGAP40
location: complement(join(384924..385030,386447..386502,387621..387781,389871..390011,390271..390477,391616..391698,392862..393021,393310..393387,393501..393592,393962..394127,395262..395413,396074..396149,399378..399595,404628..404808))
location: region:384924-404808:-1
so has part: feature:404628-404808:-1:exon
so has part: feature:399378-399595:-1:exon
so has part: feature:396074-396149:-1:exon
so has part: feature:395262-395413:-1:exon
so has part: feature:393962-394127:-1:exon
so has part: feature:393501-393592:-1:exon
so has part: feature:393310-393387:-1:exon
so has part: feature:392862-393021:-1:exon
so has part: feature:391616-391698:-1:exon
so has part: feature:390271-390477:-1:exon
so has part: feature:389871-390011:-1:exon
so has part: feature:387621-387781:-1:exon
so has part: feature:386447-386502:-1:exon
so has part: feature:384924-385030:-1:exon

XP_030359240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404628-404808:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:399378-399595:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:396074-396149:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:395262-395413:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:393962-394127:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:393501-393592:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:393310-393387:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:392862-393021:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:391616-391698:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:390271-390477:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:389871-390011:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:387621-387781:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:386447-386502:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:384924-385030:-1:exon

LOC115615250
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115615250
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(428443..431476)
location: region:428443-431476:-1
so has part: feature:428443-431476:-1:exon
subclass of: SO_0000011

115615250
type: Gene
SIO_000068: ncbigene

position:428443:-1
position: 428443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431476:-1
position: 431476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428443-431476:-1:exon

LOC115615250
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2489341
nc RNA class: lncRNA
gene: LOC115615250
product: uncharacterized LOC115615250
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_003993997.2
SIO_010081: LOC115615250
subclass of: SO_0000673
so part of: LOC115615250
location: complement(join(428443..429514,429844..429945,430556..431476))
location: region:428443-431476:-1
so has part: feature:430556-431476:-1:exon
so has part: feature:429844-429945:-1:exon
so has part: feature:428443-429514:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:430556-431476:-1:exon

position:430556:-1
position: 430556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:429844-429945:-1:exon

position:429844:-1
position: 429844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429945:-1
position: 429945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:428443-429514:-1:exon

position:429514:-1
position: 429514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ACTR5
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: ACTR5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 434356..448037
location: region:434356-448037:1
so has part: feature:434356-448037:1:exon
subclass of: SO_0000010

115615304
type: Gene
SIO_000068: ncbigene

position:434356:1
position: 434356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448037:1
position: 448037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434356-448037:1:exon

ACTR5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: ACTR5
product: actin related protein 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 63 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030503338.1
SIO_010081: ACTR5
subclass of: SO_0000673
so part of: ACTR5
location: join(434356..434785,436141..436370,437690..437859,438683..438900,439683..439865,442394..442516,443053..443192,444091..444223,445517..448037)
location: region:434356-448037:1
so has part: feature:434356-434785:1:exon
so has part: feature:436141-436370:1:exon
so has part: feature:437690-437859:1:exon
so has part: feature:438683-438900:1:exon
so has part: feature:439683-439865:1:exon
so has part: feature:442394-442516:1:exon
so has part: feature:443053-443192:1:exon
so has part: feature:444091-444223:1:exon
so has part: feature:445517-448037:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:434356-434785:1:exon

position:434785:1
position: 434785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:436141-436370:1:exon

position:436141:1
position: 436141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436370:1
position: 436370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:437690-437859:1:exon

position:437690:1
position: 437690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437859:1
position: 437859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:438683-438900:1:exon

position:438683:1
position: 438683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438900:1
position: 438900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:439683-439865:1:exon

position:439683:1
position: 439683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439865:1
position: 439865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:442394-442516:1:exon

position:442394:1
position: 442394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442516:1
position: 442516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:443053-443192:1:exon

position:443053:1
position: 443053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443192:1
position: 443192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:444091-444223:1:exon

position:444091:1
position: 444091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444223:1
position: 444223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:445517-448037:1:exon

position:445517:1
position: 445517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ACTR5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: ACTR5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-related protein 5
translation: MAAPSRVFAFRDVRWAPDPVLEPGPAVRTPQPVPLVIDNGSFQTRAGWACADPAVPAEPLLRFRSLAARNRGARGGAGAETQVGNDLGSPEPLRWLLRSPFDRNVPVQLELQELLLDHVFQRLGVSSQGCVDHPIVLTEAVCNPLYSRQMISELLFECYQVPKVSYGIDSLYSFYHNRRQSWPCSGLVISSGYQCTHILPVLEGRLDAKNCKRINLGGCQAAVYLQRLLQLKYPGHFAAITLSRMEEILHEHSYVAEDYIEELQKWQSPEYYENNMHKMQLPFSNKLLGSTLTSEEKQERRQQQLRRLQELNARRREEKLQLDQERLDRLLYVQELLEDGQMDQFHKALVELNMDSAEELQSYINKLSLSVEQTKQKILQAEVNIEVDVVDSKPETPDLDPLGSEQSLEDVESINEFEPLFAEEQPEVEKPVAAVQPVFNLAEYHQLFLGTERIRAPEIVFQPSLIGEDQAGIAETMQYVLERYPKEQQAILVQNVFLTGGNTMYPGLKARVQKELLEMRPFQSSFQVYLASSPVLDAWYGARDWAVEYMTRDEGWITRKDYEEKGGEYLKEHCASNVYVPIRLPKQAPRTTEALAPSRVLTSSTGNPCEQA
SIO_010081: ACTR5
subclass of: SO_0000673
so part of: ACTR5
location: join(434402..434785,436141..436370,437690..437859,438683..438900,439683..439865,442394..442516,443053..443192,444091..444223,445517..445774)
location: region:434402-445774:1
so has part: feature:434402-434785:1:exon
so has part: feature:436141-436370:1:exon
so has part: feature:437690-437859:1:exon
so has part: feature:438683-438900:1:exon
so has part: feature:439683-439865:1:exon
so has part: feature:442394-442516:1:exon
so has part: feature:443053-443192:1:exon
so has part: feature:444091-444223:1:exon
so has part: feature:445517-445774:1:exon

XP_030359198.1
type: Protein
SIO_000068: ncbiprotein

position:434402:1
position: 434402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445774:1
position: 445774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434402-434785:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:436141-436370:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:437690-437859:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:438683-438900:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:439683-439865:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:442394-442516:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:443053-443192:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:444091-444223:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:445517-445774:1:exon

PPP1R16B
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: PPP1R16B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 465996..529799
location: region:465996-529799:1
so has part: feature:465996-529799:1:exon
subclass of: SO_0000010

115615316
type: Gene
SIO_000068: ncbigene

position:465996:1
position: 465996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529799:1
position: 529799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465996-529799:1:exon

PPP1R16B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: PPP1R16B
product: protein phosphatase 1 regulatory subunit 16B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 37 long SRA reads, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030503365.1
SIO_010081: PPP1R16B
subclass of: SO_0000673
so part of: PPP1R16B
location: join(465996..466079,485895..486296,515313..515383,517399..517544,520305..520408,520715..520839,522860..522985,523342..523417,524425..524554,525283..525451,526067..529799)
location: region:465996-529799:1
so has part: feature:465996-466079:1:exon
so has part: feature:485895-486296:1:exon
so has part: feature:515313-515383:1:exon
so has part: feature:517399-517544:1:exon
so has part: feature:520305-520408:1:exon
so has part: feature:520715-520839:1:exon
so has part: feature:522860-522985:1:exon
so has part: feature:523342-523417:1:exon
so has part: feature:524425-524554:1:exon
so has part: feature:525283-525451:1:exon
so has part: feature:526067-529799:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:465996-466079:1:exon

position:466079:1
position: 466079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:485895-486296:1:exon

position:485895:1
position: 485895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486296:1
position: 486296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:515313-515383:1:exon

position:515313:1
position: 515313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515383:1
position: 515383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:517399-517544:1:exon

position:517399:1
position: 517399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517544:1
position: 517544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:520305-520408:1:exon

position:520305:1
position: 520305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520408:1
position: 520408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:520715-520839:1:exon

position:520715:1
position: 520715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520839:1
position: 520839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:522860-522985:1:exon

position:522860:1
position: 522860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522985:1
position: 522985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:523342-523417:1:exon

position:523342:1
position: 523342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523417:1
position: 523417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:524425-524554:1:exon

position:524425:1
position: 524425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524554:1
position: 524554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:525283-525451:1:exon

position:525283:1
position: 525283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525451:1
position: 525451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:526067-529799:1:exon

position:526067:1
position: 526067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPP1R16B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: PPP1R16B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory inhibitor subunit 16B
translation: MDAHVDLLTELQLLDKVPTLERLRAAQKRRAQQLKKWAQYEKEMQHKKRKHEKKRNAVNRKKVSFEASVALLEASLRNDLEEVCYLLKSNISPDLCNEDGLTALHQCCIDNYEEIVKLLLSHGANVNAKDNELWTPLHAAATCGHINLVKILIQHGADLLAVNADGNMPYDLCEDEPTLDVIETCMAYQGITQERINEMRAAPEQVMICDIHDILATGQDLNRTDAQGATLLHIAAANGYLHAAEVLLDQGASLDIKDWDGWEPLHAAAFWGQMQMAELLVSHGASLSARTSLDEMPIDLCEEEEFKVLLLELKHKHDVIMKSQMRHKSSLSRRTSSTGSRGKVVRRASLSDRTNLYRKECEKEAIVWQQLGATEEGTNSGLVGEIGETRCDQENTDPNSLLENSSLLPELANKSTQCDSEIPLQNGLMASASTYQYTFSNGDIWSLHADPESNPGHMLPYGNPGLPDTEQFWGAYKEHNHQTLSELKRQRAAAKLLNHPFLSTHFGSGMGGVAENVGEAKSHLIESRTSPYSSNGTSVYYTVSSGDPPLLKFKAPMEEMEEKVHGCCRIS
SIO_010081: PPP1R16B
subclass of: SO_0000673
so part of: PPP1R16B
location: join(486050..486296,515313..515383,517399..517544,520305..520408,520715..520839,522860..522985,523342..523417,524425..524554,525283..525451,526067..526588)
location: region:486050-526588:1
so has part: feature:486050-486296:1:exon
so has part: feature:515313-515383:1:exon
so has part: feature:517399-517544:1:exon
so has part: feature:520305-520408:1:exon
so has part: feature:520715-520839:1:exon
so has part: feature:522860-522985:1:exon
so has part: feature:523342-523417:1:exon
so has part: feature:524425-524554:1:exon
so has part: feature:525283-525451:1:exon
so has part: feature:526067-526588:1:exon

XP_030359225.1
type: Protein
SIO_000068: ncbiprotein

position:486050:1
position: 486050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526588:1
position: 526588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486050-486296:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:515313-515383:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517399-517544:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:520305-520408:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:520715-520839:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:522860-522985:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:523342-523417:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:524425-524554:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:525283-525451:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:526067-526588:1:exon

LOC115615317
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115615317
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 532203..540467
location: region:532203-540467:1
so has part: feature:532203-540467:1:exon
subclass of: SO_0000010

115615317
type: Gene
SIO_000068: ncbigene

position:532203:1
position: 532203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540467:1
position: 540467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532203-540467:1:exon

LOC115615317
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115615317
product: protein FAM83D-A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 long SRA reads, 15 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030503366.1
SIO_010081: LOC115615317
subclass of: SO_0000673
so part of: LOC115615317
location: join(532203..532670,535843..536010,536861..536985,537348..540467)
location: region:532203-540467:1
so has part: feature:532203-532670:1:exon
so has part: feature:535843-536010:1:exon
so has part: feature:536861-536985:1:exon
so has part: feature:537348-540467:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:532203-532670:1:exon

position:532670:1
position: 532670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:535843-536010:1:exon

position:535843:1
position: 535843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536010:1
position: 536010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:536861-536985:1:exon

position:536861:1
position: 536861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536985:1
position: 536985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:537348-540467:1:exon

position:537348:1
position: 537348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115615317
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115615317
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM83D-A-like
translation: MANLSQWLEEGAGRWPPRPPGPYSEAQRLALEELVAGGPEALRAFLRREQLPPFLSEPEVQAIARGALPPAAAPEPAAEPFAGASLDASSLTYFPERSDLEPPALELGWPGFASGAFRGLTRVEAHFQPGCGDSIYGCKEAVRRQIRSARQVIALVMDAFTDTDIFSDLQDAYNNRKVPVYILLDQGFLPHFLEMCKNLGVCPKQESLLRVRTLTGSTYYLRSGAKIVGKAHEKFMLIDGIRVTTGSYSFTWSDGKLNSSNLLLLSGQVVEHFDLQFRILYAQSMPISSKCLSSCRNSGIFDHLVSRIESSKEYTVEGNLRAEFARLSSTPKKLLKEPDQAEDSSGENSCNLGHSCLSEGEWFSNQVAIVEWRSTSTQTGPWEEKPAVTVCNAATQTYFVTAETGTQASVTARMMGTQTSVLLKTAVTQTREDEYTETPLLHRKLSKEGSSLSGKAVSSSSLWSLSSSSSQCSLASSTGSVSSLRSFEYPFGHRAEYFQKLHKERQFHYSSIRSKLSHMVHILSRKGHEPESYMSQYTGRCHLKQRRDISASLRSLRDLSLYSLNKR
SIO_010081: LOC115615317
subclass of: SO_0000673
so part of: LOC115615317
location: join(532218..532670,535843..536010,536861..536985,537348..538305)
location: region:532218-538305:1
so has part: feature:532218-532670:1:exon
so has part: feature:535843-536010:1:exon
so has part: feature:536861-536985:1:exon
so has part: feature:537348-538305:1:exon

XP_030359226.1
type: Protein
SIO_000068: ncbiprotein

position:532218:1
position: 532218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538305:1
position: 538305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532218-532670:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:535843-536010:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:536861-536985:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537348-538305:1:exon

LOC115615296
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115615296
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 540837..547094
location: region:540837-547094:1
so has part: feature:540837-547094:1:exon
subclass of: SO_0000010

115615296
type: Gene
SIO_000068: ncbigene

position:540837:1
position: 540837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547094:1
position: 547094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540837-547094:1:exon

LOC115615296
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115615296
product: protein FAM83D-B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 27 long SRA reads, 6 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030503324.1
SIO_010081: LOC115615296
subclass of: SO_0000673
so part of: LOC115615296
location: join(540837..541372,543349..543516,544111..544235,544483..547094)
location: region:540837-547094:1
so has part: feature:540837-541372:1:exon
so has part: feature:543349-543516:1:exon
so has part: feature:544111-544235:1:exon
so has part: feature:544483-547094:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:540837-541372:1:exon

position:541372:1
position: 541372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:543349-543516:1:exon

position:543349:1
position: 543349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543516:1
position: 543516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:544111-544235:1:exon

position:544111:1
position: 544111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544235:1
position: 544235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:544483-547094:1:exon

position:544483:1
position: 544483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115615296
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115615296
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM83D-B-like
translation: MANPSQWLEEGAGRWPPRPPGPYSEAQRLALEELVAGGPEALRAFLRREQLPPFLSEPEVQAIARGALPPAAAPEPAAEPFAGASLDASSLTYFPERSDLEPPALELGWPGFASGAFRGLTRVEAHFQPGCGDSIYGCKEAVRRQIRSARQMIALVMDSFTDTDIFKDLLEACSQRQVKAYILLDQSSFSHFLKMCKDLGVDLEKEKLMRIRNITGNTYYTRSGAKIVGKVREKFMLIDGIRVTTGSYSFTWTDGKLNSSNILILSGPAVAHFDLEFRILYARSKPINLKELASCRKNKVLDQVVSITVASRDLTRENFLRMEFLYLRAFVGNLKRKRSWLHASREAVYVSNNAMHVSPPLTKRNGSLVMRPHWIIER
SIO_010081: LOC115615296
subclass of: SO_0000673
so part of: LOC115615296
location: join(540920..541372,543349..543516,544111..544235,544483..544873)
location: region:540920-544873:1
so has part: feature:540920-541372:1:exon
so has part: feature:543349-543516:1:exon
so has part: feature:544111-544235:1:exon
so has part: feature:544483-544873:1:exon

XP_030359184.1
type: Protein
SIO_000068: ncbiprotein

position:540920:1
position: 540920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544873:1
position: 544873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540920-541372:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:543349-543516:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544111-544235:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:544483-544873:1:exon

DHX35
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: DHX35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 548406..578314
location: region:548406-578314:1
so has part: feature:548406-578314:1:exon
subclass of: SO_0000010

115615297
type: Gene
SIO_000068: ncbigene

position:548406:1
position: 548406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578314:1
position: 578314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548406-578314:1:exon

DHX35
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: DHX35
product: DEAH-box helicase 35, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 52 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030503325.1
SIO_010081: DHX35
subclass of: SO_0000673
so part of: DHX35
location: join(548406..548483,550723..550856,551230..551322,552156..552233,554550..554654,556544..556605,557231..557300,557861..557920,559875..559987,560325..560421,561479..561637,562932..563142,564049..564173,564876..564930,568883..568978,569336..569430,570016..570093,571254..571383,572082..572175,572713..572784,575092..575230,576609..578314)
location: region:548406-578314:1
so has part: feature:548406-548483:1:exon
so has part: feature:550723-550856:1:exon
so has part: feature:551230-551322:1:exon
so has part: feature:552156-552233:1:exon
so has part: feature:554550-554654:1:exon
so has part: feature:556544-556605:1:exon
so has part: feature:557231-557300:1:exon
so has part: feature:557861-557920:1:exon
so has part: feature:559875-559987:1:exon
so has part: feature:560325-560421:1:exon
so has part: feature:561479-561637:1:exon
so has part: feature:562932-563142:1:exon
so has part: feature:564049-564173:1:exon
so has part: feature:564876-564930:1:exon
so has part: feature:568883-568978:1:exon
so has part: feature:569336-569430:1:exon
so has part: feature:570016-570093:1:exon
so has part: feature:571254-571383:1:exon
so has part: feature:572082-572175:1:exon
so has part: feature:572713-572784:1:exon
so has part: feature:575092-575230:1:exon
so has part: feature:576609-578314:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:548406-548483:1:exon

position:548483:1
position: 548483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:550723-550856:1:exon

position:550723:1
position: 550723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550856:1
position: 550856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:551230-551322:1:exon

position:551230:1
position: 551230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551322:1
position: 551322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:552156-552233:1:exon

position:552156:1
position: 552156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552233:1
position: 552233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:554550-554654:1:exon

position:554550:1
position: 554550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554654:1
position: 554654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:556544-556605:1:exon

position:556544:1
position: 556544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556605:1
position: 556605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:557231-557300:1:exon

position:557231:1
position: 557231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557300:1
position: 557300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:557861-557920:1:exon

position:557861:1
position: 557861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557920:1
position: 557920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:559875-559987:1:exon

position:559875:1
position: 559875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559987:1
position: 559987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:560325-560421:1:exon

position:560325:1
position: 560325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560421:1
position: 560421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:561479-561637:1:exon

position:561479:1
position: 561479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561637:1
position: 561637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:562932-563142:1:exon

position:562932:1
position: 562932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563142:1
position: 563142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:564049-564173:1:exon

position:564049:1
position: 564049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564173:1
position: 564173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:564876-564930:1:exon

position:564876:1
position: 564876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564930:1
position: 564930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:568883-568978:1:exon

position:568883:1
position: 568883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568978:1
position: 568978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:569336-569430:1:exon

position:569336:1
position: 569336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569430:1
position: 569430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:570016-570093:1:exon

position:570016:1
position: 570016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570093:1
position: 570093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:571254-571383:1:exon

position:571254:1
position: 571254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571383:1
position: 571383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:572082-572175:1:exon

position:572082:1
position: 572082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572175:1
position: 572175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:572713-572784:1:exon

position:572713:1
position: 572713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572784:1
position: 572784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:575092-575230:1:exon

position:575092:1
position: 575092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575230:1
position: 575230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:576609-578314:1:exon

position:576609:1
position: 576609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DHX35
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: DHX35
product: DEAH-box helicase 35, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 30 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030503326.1
SIO_010081: DHX35
subclass of: SO_0000673
so part of: DHX35
location: join(548406..548483,550723..550856,551230..551322,552156..552233,554550..554654,556544..556605,557231..557300,557861..557920,559875..559987,560325..560421,561479..561637,562932..563142,564049..564173,564876..564930,568883..568978,569336..569430,570016..570093,571254..571383,572094..572175,572713..572784,575092..575230,576609..578277)
location: region:548406-578277:1
so has part: feature:548406-548483:1:exon
so has part: feature:550723-550856:1:exon
so has part: feature:551230-551322:1:exon
so has part: feature:552156-552233:1:exon
so has part: feature:554550-554654:1:exon
so has part: feature:556544-556605:1:exon
so has part: feature:557231-557300:1:exon
so has part: feature:557861-557920:1:exon
so has part: feature:559875-559987:1:exon
so has part: feature:560325-560421:1:exon
so has part: feature:561479-561637:1:exon
so has part: feature:562932-563142:1:exon
so has part: feature:564049-564173:1:exon
so has part: feature:564876-564930:1:exon
so has part: feature:568883-568978:1:exon
so has part: feature:569336-569430:1:exon
so has part: feature:570016-570093:1:exon
so has part: feature:571254-571383:1:exon
so has part: feature:572094-572175:1:exon
so has part: feature:572713-572784:1:exon
so has part: feature:575092-575230:1:exon
so has part: feature:576609-578277:1:exon

position:578277:1
position: 578277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548406-548483:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:550723-550856:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551230-551322:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552156-552233:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:554550-554654:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:556544-556605:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:557231-557300:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:557861-557920:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:559875-559987:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:560325-560421:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:561479-561637:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:562932-563142:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:564049-564173:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:564876-564930:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:568883-568978:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:569336-569430:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:570016-570093:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:571254-571383:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:572094-572175:1:exon

position:572094:1
position: 572094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:572713-572784:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:575092-575230:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:576609-578277:1:exon

DHX35
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: DHX35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent RNA helicase DHX35 isoform X1
translation: MAASVGPVKFWKPGTEGPGVSISEERQSPAESSGVTVIYNPYASLSVEQQRQKLPIFKLRNHILYLVENYQTLVLVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVSIAGRVADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMADPLLTRYSAIMLDEAHERTLYTDIAIGLLRKVQKKRGDLRLIVSSATLDAEKFRNFFNQNSTGDPSKDTSVILTVEGRTFPVDIFYIQSPVPDYIKSTVETAMKIHQTENDGDILAFLTGQEEVETVVSMLIEQARALSRTGMKKHLRVLPMYAGLPSPEQMKVFERVSRNVRKVIVATNVAETSITVHGIVFVIDCGFVKLRAYNPKTAIECLVVVPVSKASANQRAGRAGRNRSGKCYRLYTEEDFEKLPKSTVPEMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQSMVQALELLYALGGLDMHCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILTIAAMMQIQNIFVIPPNQKAQAARHHRKFAVEEGDHLTMLNVYEAFVKHSKSSQWCQEHFLNYKGLVRASVVREQLKKLLVRFKVPKKSSEVFFSGDPDPVLRCIVSGFFANAAKFHSTGAYRTIRDDHELHIHPTSVLYAEKPPRWVVYNEVIQTAKYYMRDVTAVESAWLLELAPHFYQQVTLRDQNKAQTHLSLTAKRVKVGDQ
SIO_010081: DHX35
subclass of: SO_0000673
so part of: DHX35
location: join(548444..548483,550723..550856,551230..551322,552156..552233,554550..554654,556544..556605,557231..557300,557861..557920,559875..559987,560325..560421,561479..561637,562932..563142,564049..564173,564876..564930,568883..568978,569336..569430,570016..570093,571254..571383,572082..572175,572713..572784,575092..575230,576609..576653)
location: region:548444-576653:1
so has part: feature:548444-548483:1:exon
so has part: feature:550723-550856:1:exon
so has part: feature:551230-551322:1:exon
so has part: feature:552156-552233:1:exon
so has part: feature:554550-554654:1:exon
so has part: feature:556544-556605:1:exon
so has part: feature:557231-557300:1:exon
so has part: feature:557861-557920:1:exon
so has part: feature:559875-559987:1:exon
so has part: feature:560325-560421:1:exon
so has part: feature:561479-561637:1:exon
so has part: feature:562932-563142:1:exon
so has part: feature:564049-564173:1:exon
so has part: feature:564876-564930:1:exon
so has part: feature:568883-568978:1:exon
so has part: feature:569336-569430:1:exon
so has part: feature:570016-570093:1:exon
so has part: feature:571254-571383:1:exon
so has part: feature:572082-572175:1:exon
so has part: feature:572713-572784:1:exon
so has part: feature:575092-575230:1:exon
so has part: feature:576609-576653:1:exon

XP_030359185.1
type: Protein
SIO_000068: ncbiprotein

position:548444:1
position: 548444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576653:1
position: 576653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548444-548483:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:550723-550856:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551230-551322:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552156-552233:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:554550-554654:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:556544-556605:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:557231-557300:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:557861-557920:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:559875-559987:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:560325-560421:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:561479-561637:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:562932-563142:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:564049-564173:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:564876-564930:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:568883-568978:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:569336-569430:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:570016-570093:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:571254-571383:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:572082-572175:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:572713-572784:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:575092-575230:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:576609-576653:1:exon

DHX35
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: DHX35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent RNA helicase DHX35 isoform X2
translation: MAASVGPVKFWKPGTEGPGVSISEERQSPAESSGVTVIYNPYASLSVEQQRQKLPIFKLRNHILYLVENYQTLVLVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVSIAGRVADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMADPLLTRYSAIMLDEAHERTLYTDIAIGLLRKVQKKRGDLRLIVSSATLDAEKFRNFFNQNSTGDPSKDTSVILTVEGRTFPVDIFYIQSPVPDYIKSTVETAMKIHQTENDGDILAFLTGQEEVETVVSMLIEQARALSRTGMKKHLRVLPMYAGLPSPEQMKVFERVSRNVRKVIVATNVAETSITVHGIVFVIDCGFVKLRAYNPKTAIECLVVVPVSKASANQRAGRAGRNRSGKCYRLYTEEDFEKLPKSTVPEMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQSMVQALELLYALGGLDMHCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILTIAAMMQIQNIFVIPPNQKAQAARHHRKFAVEEGDHLTMLNVYEAFVKHSKSSQWCQEHFLNYKGLVRASVVREQLKKLLVRFKVPKKSSEGDPDPVLRCIVSGFFANAAKFHSTGAYRTIRDDHELHIHPTSVLYAEKPPRWVVYNEVIQTAKYYMRDVTAVESAWLLELAPHFYQQVTLRDQNKAQTHLSLTAKRVKVGDQ
SIO_010081: DHX35
subclass of: SO_0000673
so part of: DHX35
location: join(548444..548483,550723..550856,551230..551322,552156..552233,554550..554654,556544..556605,557231..557300,557861..557920,559875..559987,560325..560421,561479..561637,562932..563142,564049..564173,564876..564930,568883..568978,569336..569430,570016..570093,571254..571383,572094..572175,572713..572784,575092..575230,576609..576653)
location: region:548444-576653:1
so has part: feature:548444-548483:1:exon
so has part: feature:550723-550856:1:exon
so has part: feature:551230-551322:1:exon
so has part: feature:552156-552233:1:exon
so has part: feature:554550-554654:1:exon
so has part: feature:556544-556605:1:exon
so has part: feature:557231-557300:1:exon
so has part: feature:557861-557920:1:exon
so has part: feature:559875-559987:1:exon
so has part: feature:560325-560421:1:exon
so has part: feature:561479-561637:1:exon
so has part: feature:562932-563142:1:exon
so has part: feature:564049-564173:1:exon
so has part: feature:564876-564930:1:exon
so has part: feature:568883-568978:1:exon
so has part: feature:569336-569430:1:exon
so has part: feature:570016-570093:1:exon
so has part: feature:571254-571383:1:exon
so has part: feature:572094-572175:1:exon
so has part: feature:572713-572784:1:exon
so has part: feature:575092-575230:1:exon
so has part: feature:576609-576653:1:exon

XP_030359186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:548444-548483:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:550723-550856:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551230-551322:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552156-552233:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:554550-554654:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:556544-556605:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:557231-557300:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:557861-557920:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:559875-559987:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:560325-560421:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:561479-561637:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:562932-563142:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:564049-564173:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:564876-564930:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:568883-568978:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:569336-569430:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:570016-570093:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:571254-571383:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:572094-572175:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:572713-572784:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:575092-575230:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:576609-576653:1:exon

LOC115615285
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115615285
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 607721..609836
location: region:607721-609836:1
so has part: feature:607721-609836:1:exon
subclass of: SO_0000011

115615285
type: Gene
SIO_000068: ncbigene

position:607721:1
position: 607721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609836:1
position: 609836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607721-609836:1:exon

LOC115615285
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2489341
nc RNA class: lncRNA
gene: LOC115615285
product: uncharacterized LOC115615285
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003994013.1
SIO_010081: LOC115615285
subclass of: SO_0000673
so part of: LOC115615285
location: join(607721..607841,607917..608010,609754..609836)
location: region:607721-609836:1
so has part: feature:607721-607841:1:exon
so has part: feature:607917-608010:1:exon
so has part: feature:609754-609836:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:607721-607841:1:exon

position:607841:1
position: 607841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:607917-608010:1:exon

position:607917:1
position: 607917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608010:1
position: 608010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:609754-609836:1:exon

position:609754:1
position: 609754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115615403
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115615403
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 995777..1013962
location: region:995777-1013962:1
so has part: feature:995777-1013962:1:exon
subclass of: SO_0000011

115615403
type: Gene
SIO_000068: ncbigene

position:995777:1
position: 995777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013962:1
position: 1013962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:995777-1013962:1:exon

LOC115615403
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2489341
nc RNA class: lncRNA
gene: LOC115615403
product: uncharacterized LOC115615403, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003994038.1
SIO_010081: LOC115615403
subclass of: SO_0000673
so part of: LOC115615403
location: join(995777..995862,1008704..1008877,1010190..1010234,1013718..1013962)
location: region:995777-1013962:1
so has part: feature:995777-995862:1:exon
so has part: feature:1008704-1008877:1:exon
so has part: feature:1010190-1010234:1:exon
so has part: feature:1013718-1013962:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:995777-995862:1:exon

position:995862:1
position: 995862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1008704-1008877:1:exon

position:1008704:1
position: 1008704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1008877:1
position: 1008877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1010190-1010234:1:exon

position:1010190:1
position: 1010190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010234:1
position: 1010234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1013718-1013962:1:exon

position:1013718:1
position: 1013718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115615403
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2489341
nc RNA class: lncRNA
gene: LOC115615403
product: uncharacterized LOC115615403, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003994037.1
SIO_010081: LOC115615403
subclass of: SO_0000673
so part of: LOC115615403
location: join(1001584..1001776,1008704..1008877,1010190..1010234,1013718..1013962)
location: region:1001584-1013962:1
so has part: feature:1001584-1001776:1:exon
so has part: feature:1008704-1008877:1:exon
so has part: feature:1010190-1010234:1:exon
so has part: feature:1013718-1013962:1:exon

position:1001584:1
position: 1001584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1001584-1001776:1:exon

position:1001776:1
position: 1001776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1008704-1008877:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1010190-1010234:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1013718-1013962:1:exon

LOC115615404
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115615404
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1016266..1024974
location: region:1016266-1024974:1
so has part: feature:1016266-1024974:1:exon
subclass of: SO_0000011

115615404
type: Gene
SIO_000068: ncbigene

position:1016266:1
position: 1016266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024974:1
position: 1024974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1016266-1024974:1:exon

LOC115615404
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2489341
nc RNA class: lncRNA
gene: LOC115615404
product: uncharacterized LOC115615404, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003994039.1
SIO_010081: LOC115615404
subclass of: SO_0000673
so part of: LOC115615404
location: join(1016266..1017318,1024698..1024974)
location: region:1016266-1024974:1
so has part: feature:1016266-1017318:1:exon
so has part: feature:1024698-1024974:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1016266-1017318:1:exon

position:1017318:1
position: 1017318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1024698-1024974:1:exon

position:1024698:1
position: 1024698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115615404
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2489341
nc RNA class: lncRNA
gene: LOC115615404
product: uncharacterized LOC115615404, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003994040.1
SIO_010081: LOC115615404
subclass of: SO_0000673
so part of: LOC115615404
location: join(1016266..1016561,1017106..1017318,1024698..1024974)
location: region:1016266-1024974:1
so has part: feature:1016266-1016561:1:exon
so has part: feature:1017106-1017318:1:exon
so has part: feature:1024698-1024974:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1016266-1016561:1:exon

position:1016561:1
position: 1016561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1017106-1017318:1:exon

position:1017106:1
position: 1017106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1024698-1024974:1:exon

LOC115615239
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115615239
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1045969..1055510
location: region:1045969-1055510:1
so has part: feature:1045969-1055510:1:exon
subclass of: SO_0000011

115615239
type: Gene
SIO_000068: ncbigene

position:1045969:1
position: 1045969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1055510:1
position: 1055510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1045969-1055510:1:exon

LOC115615239
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2489341
nc RNA class: lncRNA
gene: LOC115615239
product: uncharacterized LOC115615239
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003993991.1
SIO_010081: LOC115615239
subclass of: SO_0000673
so part of: LOC115615239
location: join(1045969..1046079,1049750..1049994,1055423..1055510)
location: region:1045969-1055510:1
so has part: feature:1045969-1046079:1:exon
so has part: feature:1049750-1049994:1:exon
so has part: feature:1055423-1055510:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1045969-1046079:1:exon

position:1046079:1
position: 1046079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1049750-1049994:1:exon

position:1049750:1
position: 1049750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1049994:1
position: 1049994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1055423-1055510:1:exon

position:1055423:1
position: 1055423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115615399
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115615399
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1082361..1130991
location: region:1082361-1130991:1
so has part: feature:1082361-1130991:1:exon
subclass of: SO_0000011

115615399
type: Gene
SIO_000068: ncbigene

position:1082361:1
position: 1082361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1130991:1
position: 1130991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1082361-1130991:1:exon

LOC115615399
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2489341
nc RNA class: lncRNA
gene: LOC115615399
product: uncharacterized LOC115615399
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003994036.1
SIO_010081: LOC115615399
subclass of: SO_0000673
so part of: LOC115615399
location: join(1082361..1083238,1091558..1091686,1101050..1101163,1124803..1124912,1130472..1130991)
location: region:1082361-1130991:1
so has part: feature:1082361-1083238:1:exon
so has part: feature:1091558-1091686:1:exon
so has part: feature:1101050-1101163:1:exon
so has part: feature:1124803-1124912:1:exon
so has part: feature:1130472-1130991:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1082361-1083238:1:exon

position:1083238:1
position: 1083238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1091558-1091686:1:exon

position:1091558:1
position: 1091558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1091686:1
position: 1091686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1101050-1101163:1:exon

position:1101050:1
position: 1101050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1101163:1
position: 1101163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1124803-1124912:1:exon

position:1124803:1
position: 1124803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1124912:1
position: 1124912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1130472-1130991:1:exon

position:1130472:1
position: 1130472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAFB
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: MAFB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1456449..1460203)
location: region:1456449-1460203:-1
so has part: feature:1456449-1460203:-1:exon
subclass of: SO_0000010

115615298
type: Gene
SIO_000068: ncbigene

position:1456449:-1
position: 1456449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1460203:-1
position: 1460203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1456449-1460203:-1:exon

MAFB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: MAFB
product: MAF bZIP transcription factor B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 536 long SRA reads, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030503327.1
SIO_010081: MAFB
subclass of: SO_0000673
so part of: MAFB
location: complement(1456449..1460203)
location: region:1456449-1460203:-1
so has part: feature:1456449-1460203:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1456449-1460203:-1:exon

MAFB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: MAFB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor MafB
translation: MAGELSIGAELPTSPLAMEYVNDFDLMKFDVKKEPLGRNDRSGRHCTRLQPAGSVSSTPISTPCSSVPSSPSFSPTEQKTHLEDLYWMANSYQQMNPEALNLTPEDAVEALIGSHQVSQQLQGFESFRAHHHHHHHHHQHHHQYPAVTHEDLAGSGHPHHHHHHHHQASPTPSTSSSSSQQLQNSHQQHPPSSSVEDRFSDDQLVSMSVRELNRHLRGFTKDEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVTRLARERDAYKLKCEKLASNGFREAGSTSDNPSSPEFFM
SIO_010081: MAFB
subclass of: SO_0000673
so part of: MAFB
location: complement(1458561..1459496)
location: region:1458561-1459496:-1
so has part: feature:1458561-1459496:-1:exon

XP_030359187.1
type: Protein
SIO_000068: ncbiprotein

position:1458561:-1
position: 1458561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1459496:-1
position: 1459496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1458561-1459496:-1:exon

TOP1
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: TOP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1639647..1708167
location: region:1639647-1708167:1
so has part: feature:1639647-1708167:1:exon
subclass of: SO_0000010

115614975
type: Gene
SIO_000068: ncbigene

position:1639647:1
position: 1639647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1708167:1
position: 1708167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1639647-1708167:1:exon

TOP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: TOP1
product: DNA topoisomerase I, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 1290 long SRA reads, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030502526.1
SIO_010081: TOP1
subclass of: SO_0000673
so part of: TOP1
location: join(1639647..1639845,1640339..1640363,1667871..1667973,1681056..1681176,1681751..1681809,1684521..1684616,1685599..1685674,1686668..1686765,1690995..1691110,1695121..1695242,1695923..1696045,1697432..1697619,1698248..1698392,1699440..1699583,1700970..1701155,1702724..1702792,1703396..1703510,1704215..1704342,1705402..1705496,1706244..1706393,1706737..1708167)
location: region:1639647-1708167:1
so has part: feature:1639647-1639845:1:exon
so has part: feature:1640339-1640363:1:exon
so has part: feature:1667871-1667973:1:exon
so has part: feature:1681056-1681176:1:exon
so has part: feature:1681751-1681809:1:exon
so has part: feature:1684521-1684616:1:exon
so has part: feature:1685599-1685674:1:exon
so has part: feature:1686668-1686765:1:exon
so has part: feature:1690995-1691110:1:exon
so has part: feature:1695121-1695242:1:exon
so has part: feature:1695923-1696045:1:exon
so has part: feature:1697432-1697619:1:exon
so has part: feature:1698248-1698392:1:exon
so has part: feature:1699440-1699583:1:exon
so has part: feature:1700970-1701155:1:exon
so has part: feature:1702724-1702792:1:exon
so has part: feature:1703396-1703510:1:exon
so has part: feature:1704215-1704342:1:exon
so has part: feature:1705402-1705496:1:exon
so has part: feature:1706244-1706393:1:exon
so has part: feature:1706737-1708167:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1639647-1639845:1:exon

position:1639845:1
position: 1639845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1640339-1640363:1:exon

position:1640339:1
position: 1640339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1640363:1
position: 1640363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1667871-1667973:1:exon

position:1667871:1
position: 1667871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1667973:1
position: 1667973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1681056-1681176:1:exon

position:1681056:1
position: 1681056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1681176:1
position: 1681176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1681751-1681809:1:exon

position:1681751:1
position: 1681751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1681809:1
position: 1681809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1684521-1684616:1:exon

position:1684521:1
position: 1684521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1684616:1
position: 1684616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1685599-1685674:1:exon

position:1685599:1
position: 1685599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1685674:1
position: 1685674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1686668-1686765:1:exon

position:1686668:1
position: 1686668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1686765:1
position: 1686765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1690995-1691110:1:exon

position:1690995:1
position: 1690995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1691110:1
position: 1691110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1695121-1695242:1:exon

position:1695121:1
position: 1695121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1695242:1
position: 1695242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1695923-1696045:1:exon

position:1695923:1
position: 1695923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1696045:1
position: 1696045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1697432-1697619:1:exon

position:1697432:1
position: 1697432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1697619:1
position: 1697619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1698248-1698392:1:exon

position:1698248:1
position: 1698248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1698392:1
position: 1698392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1699440-1699583:1:exon

position:1699440:1
position: 1699440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1699583:1
position: 1699583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1700970-1701155:1:exon

position:1700970:1
position: 1700970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1701155:1
position: 1701155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1702724-1702792:1:exon

position:1702724:1
position: 1702724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1702792:1
position: 1702792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1703396-1703510:1:exon

position:1703396:1
position: 1703396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1703510:1
position: 1703510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1704215-1704342:1:exon

position:1704215:1
position: 1704215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1704342:1
position: 1704342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1705402-1705496:1:exon

position:1705402:1
position: 1705402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1705496:1
position: 1705496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1706244-1706393:1:exon

position:1706244:1
position: 1706244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1706393:1
position: 1706393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1706737-1708167:1:exon

position:1706737:1
position: 1706737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TOP1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2489341
gene: TOP1
product: DNA topoisomerase I, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1259 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003993915.1
SIO_010081: TOP1
so part of: TOP1
location: join(1639647..1639845,1640339..1640363,1667871..1667973,1681056..1681176,1681751..1681809,1684521..1684616,1685599..1685674,1686668..1686765,1690995..1691110,1695121..1695242,1695923..1696045,1697432..1697619,1698248..1698392,1699440..1699583,1700970..1701155,1702724..1702792,1703396..1703510,1704215..1704342,1706244..1706393,1706737..1708167)
location: region:1639647-1708167:1
so has part: feature:1639647-1639845:1:exon
so has part: feature:1640339-1640363:1:exon
so has part: feature:1667871-1667973:1:exon
so has part: feature:1681056-1681176:1:exon
so has part: feature:1681751-1681809:1:exon
so has part: feature:1684521-1684616:1:exon
so has part: feature:1685599-1685674:1:exon
so has part: feature:1686668-1686765:1:exon
so has part: feature:1690995-1691110:1:exon
so has part: feature:1695121-1695242:1:exon
so has part: feature:1695923-1696045:1:exon
so has part: feature:1697432-1697619:1:exon
so has part: feature:1698248-1698392:1:exon
so has part: feature:1699440-1699583:1:exon
so has part: feature:1700970-1701155:1:exon
so has part: feature:1702724-1702792:1:exon
so has part: feature:1703396-1703510:1:exon
so has part: feature:1704215-1704342:1:exon
so has part: feature:1706244-1706393:1:exon
so has part: feature:1706737-1708167:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1639647-1639845:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1640339-1640363:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1667871-1667973:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1681056-1681176:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1681751-1681809:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1684521-1684616:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1685599-1685674:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1686668-1686765:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1690995-1691110:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1695121-1695242:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1695923-1696045:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1697432-1697619:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1698248-1698392:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1699440-1699583:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1700970-1701155:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1702724-1702792:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1703396-1703510:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1704215-1704342:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1706244-1706393:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1706737-1708167:1:exon

TOP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: TOP1
product: DNA topoisomerase I, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 1244 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030502527.1
SIO_010081: TOP1
subclass of: SO_0000673
so part of: TOP1
location: join(1639647..1639845,1640339..1640363,1667871..1667973,1681056..1681176,1681751..1681809,1684521..1684616,1685599..1685674,1686668..1686765,1690995..1691110,1695121..1695242,1695923..1696045,1697432..1697619,1698248..1698392,1699440..1699583,1700970..1701155,1703396..1703510,1704215..1704342,1705402..1705496,1706244..1706393,1706737..1708167)
location: region:1639647-1708167:1
so has part: feature:1639647-1639845:1:exon
so has part: feature:1640339-1640363:1:exon
so has part: feature:1667871-1667973:1:exon
so has part: feature:1681056-1681176:1:exon
so has part: feature:1681751-1681809:1:exon
so has part: feature:1684521-1684616:1:exon
so has part: feature:1685599-1685674:1:exon
so has part: feature:1686668-1686765:1:exon
so has part: feature:1690995-1691110:1:exon
so has part: feature:1695121-1695242:1:exon
so has part: feature:1695923-1696045:1:exon
so has part: feature:1697432-1697619:1:exon
so has part: feature:1698248-1698392:1:exon
so has part: feature:1699440-1699583:1:exon
so has part: feature:1700970-1701155:1:exon
so has part: feature:1703396-1703510:1:exon
so has part: feature:1704215-1704342:1:exon
so has part: feature:1705402-1705496:1:exon
so has part: feature:1706244-1706393:1:exon
so has part: feature:1706737-1708167:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1639647-1639845:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1640339-1640363:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1667871-1667973:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1681056-1681176:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1681751-1681809:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1684521-1684616:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1685599-1685674:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1686668-1686765:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1690995-1691110:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1695121-1695242:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1695923-1696045:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1697432-1697619:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1698248-1698392:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1699440-1699583:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1700970-1701155:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1703396-1703510:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1704215-1704342:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1705402-1705496:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1706244-1706393:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1706737-1708167:1:exon

TOP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: TOP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA topoisomerase 1 isoform X1
translation: MSGDQLHNDSQIEADFRANDSHKHKDKHKDREHRHKEHKKDKEKDREKSKHSNSEHKDSSEKKHKDKEKTKHKDGSSEKHKDKHKDKEKRKEEKMKSSSGDMKIKKEKENGFSSPPRIKDEPDDDGFYASPKEDSKLLKRPREDDDADYKPKKIRTEDIKKAKKRKQEEEEDGKAKKAKSKDKKVPEADKRKKPKKEEEQKWKWWEEERYPEGIKWKFLEHKGPVFAPPYEPLPENVKFYYDGKVMKLSTKAEEVATFFAKMLDHEYTTKEIFRKNFFKDWRKEMTPEEKSTITSLSKCDFTHMSQYFKAQTEARKQMSKEEKQKIKEENERLLKEYGYCVMDNHKERIANFKIEPPGLFRGRGNHPKMGMLKRRIMPEDIIINCSKDSKIPPPPPGHKWKEVRHDNKVTWLVSWTENIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCVDKIRNQYREDWKSKEMKVRQRAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHIKLHPELDGQEYVVEFDFLGKDSIRYYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNTSILNKHLQDLMEGLTAKVFRTYNASITLQQQLKELTNPDDNIPAKILSYNRANRAVAILCNHQRAPPKTFEKSMMNLQSKIDAKKEQLADARRELKSAKADAKVRRDEKSKKTVESKKKAVQRIEEQLMKLEVQATDREENKQIALGTSKLNYLDPRISVAWCKKWGIPIEKIYNKTQREKFAWAIDMAEEDYEF
SIO_010081: TOP1
subclass of: SO_0000673
so part of: TOP1
location: join(1639813..1639845,1640339..1640363,1667871..1667973,1681056..1681176,1681751..1681809,1684521..1684616,1685599..1685674,1686668..1686765,1690995..1691110,1695121..1695242,1695923..1696045,1697432..1697619,1698248..1698392,1699440..1699583,1700970..1701155,1702724..1702792,1703396..1703510,1704215..1704342,1705402..1705496,1706244..1706393,1706737..1706839)
location: region:1639813-1706839:1
so has part: feature:1639813-1639845:1:exon
so has part: feature:1640339-1640363:1:exon
so has part: feature:1667871-1667973:1:exon
so has part: feature:1681056-1681176:1:exon
so has part: feature:1681751-1681809:1:exon
so has part: feature:1684521-1684616:1:exon
so has part: feature:1685599-1685674:1:exon
so has part: feature:1686668-1686765:1:exon
so has part: feature:1690995-1691110:1:exon
so has part: feature:1695121-1695242:1:exon
so has part: feature:1695923-1696045:1:exon
so has part: feature:1697432-1697619:1:exon
so has part: feature:1698248-1698392:1:exon
so has part: feature:1699440-1699583:1:exon
so has part: feature:1700970-1701155:1:exon
so has part: feature:1702724-1702792:1:exon
so has part: feature:1703396-1703510:1:exon
so has part: feature:1704215-1704342:1:exon
so has part: feature:1705402-1705496:1:exon
so has part: feature:1706244-1706393:1:exon
so has part: feature:1706737-1706839:1:exon

XP_030358386.1
type: Protein
SIO_000068: ncbiprotein

position:1639813:1
position: 1639813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1706839:1
position: 1706839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1639813-1639845:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1640339-1640363:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1667871-1667973:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1681056-1681176:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1681751-1681809:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1684521-1684616:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1685599-1685674:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1686668-1686765:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1690995-1691110:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1695121-1695242:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1695923-1696045:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1697432-1697619:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1698248-1698392:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1699440-1699583:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1700970-1701155:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1702724-1702792:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1703396-1703510:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1704215-1704342:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1705402-1705496:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1706244-1706393:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1706737-1706839:1:exon

TOP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: TOP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA topoisomerase 1 isoform X2
translation: MSGDQLHNDSQIEADFRANDSHKHKDKHKDREHRHKEHKKDKEKDREKSKHSNSEHKDSSEKKHKDKEKTKHKDGSSEKHKDKHKDKEKRKEEKMKSSSGDMKIKKEKENGFSSPPRIKDEPDDDGFYASPKEDSKLLKRPREDDDADYKPKKIRTEDIKKAKKRKQEEEEDGKAKKAKSKDKKVPEADKRKKPKKEEEQKWKWWEEERYPEGIKWKFLEHKGPVFAPPYEPLPENVKFYYDGKVMKLSTKAEEVATFFAKMLDHEYTTKEIFRKNFFKDWRKEMTPEEKSTITSLSKCDFTHMSQYFKAQTEARKQMSKEEKQKIKEENERLLKEYGYCVMDNHKERIANFKIEPPGLFRGRGNHPKMGMLKRRIMPEDIIINCSKDSKIPPPPPGHKWKEVRHDNKVTWLVSWTENIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCVDKIRNQYREDWKSKEMKVRQRAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHIKLHPELDGQEYVVEFDFLGKDSIRYYNKVPVEKRTSILNKHLQDLMEGLTAKVFRTYNASITLQQQLKELTNPDDNIPAKILSYNRANRAVAILCNHQRAPPKTFEKSMMNLQSKIDAKKEQLADARRELKSAKADAKVRRDEKSKKTVESKKKAVQRIEEQLMKLEVQATDREENKQIALGTSKLNYLDPRISVAWCKKWGIPIEKIYNKTQREKFAWAIDMAEEDYEF
SIO_010081: TOP1
subclass of: SO_0000673
so part of: TOP1
location: join(1639813..1639845,1640339..1640363,1667871..1667973,1681056..1681176,1681751..1681809,1684521..1684616,1685599..1685674,1686668..1686765,1690995..1691110,1695121..1695242,1695923..1696045,1697432..1697619,1698248..1698392,1699440..1699583,1700970..1701155,1703396..1703510,1704215..1704342,1705402..1705496,1706244..1706393,1706737..1706839)
location: region:1639813-1706839:1
so has part: feature:1639813-1639845:1:exon
so has part: feature:1640339-1640363:1:exon
so has part: feature:1667871-1667973:1:exon
so has part: feature:1681056-1681176:1:exon
so has part: feature:1681751-1681809:1:exon
so has part: feature:1684521-1684616:1:exon
so has part: feature:1685599-1685674:1:exon
so has part: feature:1686668-1686765:1:exon
so has part: feature:1690995-1691110:1:exon
so has part: feature:1695121-1695242:1:exon
so has part: feature:1695923-1696045:1:exon
so has part: feature:1697432-1697619:1:exon
so has part: feature:1698248-1698392:1:exon
so has part: feature:1699440-1699583:1:exon
so has part: feature:1700970-1701155:1:exon
so has part: feature:1703396-1703510:1:exon
so has part: feature:1704215-1704342:1:exon
so has part: feature:1705402-1705496:1:exon
so has part: feature:1706244-1706393:1:exon
so has part: feature:1706737-1706839:1:exon

XP_030358387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1639813-1639845:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1640339-1640363:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1667871-1667973:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1681056-1681176:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1681751-1681809:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1684521-1684616:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1685599-1685674:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1686668-1686765:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1690995-1691110:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1695121-1695242:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1695923-1696045:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1697432-1697619:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1698248-1698392:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1699440-1699583:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1700970-1701155:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1703396-1703510:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1704215-1704342:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1705402-1705496:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1706244-1706393:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1706737-1706839:1:exon

PLCG1
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: PLCG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1712696..1757528
location: region:1712696-1757528:1
so has part: feature:1712696-1757528:1:exon
subclass of: SO_0000010

115615084
type: Gene
SIO_000068: ncbigene

position:1712696:1
position: 1712696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1757528:1
position: 1757528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1712696-1757528:1:exon

PLCG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: PLCG1
product: phospholipase C gamma 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 81 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030502782.1
SIO_010081: PLCG1
subclass of: SO_0000673
so part of: PLCG1
location: join(1712696..1713015,1733088..1733240,1734316..1734409,1734944..1734991,1738882..1738966,1739726..1739809,1740036..1740058,1741130..1741202,1742237..1742338,1742740..1742858,1743616..1743701,1743981..1744101,1744407..1744575,1745019..1745141,1746047..1746148,1746883..1747070,1747365..1747565,1748010..1748129,1748449..1748629,1748928..1749005,1749450..1749553,1749796..1749892,1749999..1750068,1750814..1750971,1751456..1751552,1751958..1752182,1752858..1753006,1754660..1754774,1754930..1755091,1755398..1755486,1756378..1756565,1756917..1757528)
location: region:1712696-1757528:1
so has part: feature:1712696-1713015:1:exon
so has part: feature:1733088-1733240:1:exon
so has part: feature:1734316-1734409:1:exon
so has part: feature:1734944-1734991:1:exon
so has part: feature:1738882-1738966:1:exon
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so has part: feature:1745019-1745141:1:exon
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so has part: feature:1746883-1747070:1:exon
so has part: feature:1747365-1747565:1:exon
so has part: feature:1748010-1748129:1:exon
so has part: feature:1748449-1748629:1:exon
so has part: feature:1748928-1749005:1:exon
so has part: feature:1749450-1749553:1:exon
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so has part: feature:1756917-1757528:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1712696-1713015:1:exon

position:1713015:1
position: 1713015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1733088-1733240:1:exon

position:1733088:1
position: 1733088
reference: sequence
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position:1733240:1
position: 1733240
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 3
SIO_000628: feature:1734316-1734409:1:exon

position:1734316:1
position: 1734316
reference: sequence
type: ForwardStrandPosition
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position:1734409:1
position: 1734409
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 4
SIO_000628: feature:1734944-1734991:1:exon

position:1734944:1
position: 1734944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1734991:1
position: 1734991
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 5
SIO_000628: feature:1738882-1738966:1:exon

position:1738882:1
position: 1738882
reference: sequence
type: ForwardStrandPosition
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position:1738966:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 6
SIO_000628: feature:1739726-1739809:1:exon

position:1739726:1
position: 1739726
reference: sequence
type: ForwardStrandPosition
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position:1739809:1
position: 1739809
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:1740036-1740058:1:exon

position:1740036:1
position: 1740036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1740058:1
position: 1740058
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 8
SIO_000628: feature:1741130-1741202:1:exon

position:1741130:1
position: 1741130
reference: sequence
type: ForwardStrandPosition
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position:1741202:1
position: 1741202
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 9
SIO_000628: feature:1742237-1742338:1:exon

position:1742237:1
position: 1742237
reference: sequence
type: ForwardStrandPosition
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position:1742338:1
position: 1742338
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 10
SIO_000628: feature:1742740-1742858:1:exon

position:1742740:1
position: 1742740
reference: sequence
type: ForwardStrandPosition
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position:1742858:1
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reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:1743616-1743701:1:exon

position:1743616:1
position: 1743616
reference: sequence
type: ForwardStrandPosition
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position:1743701:1
position: 1743701
reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:1743981-1744101:1:exon

position:1743981:1
position: 1743981
reference: sequence
type: ForwardStrandPosition
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position:1744101:1
position: 1744101
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 13
SIO_000628: feature:1744407-1744575:1:exon

position:1744407:1
position: 1744407
reference: sequence
type: ForwardStrandPosition
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position:1744575:1
position: 1744575
reference: sequence
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urn:…
SIO_000300: 14
SIO_000628: feature:1745019-1745141:1:exon

position:1745019:1
position: 1745019
reference: sequence
type: ForwardStrandPosition
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position:1745141:1
position: 1745141
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 15
SIO_000628: feature:1746047-1746148:1:exon

position:1746047:1
position: 1746047
reference: sequence
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position:1746148:1
position: 1746148
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urn:…
SIO_000300: 16
SIO_000628: feature:1746883-1747070:1:exon

position:1746883:1
position: 1746883
reference: sequence
type: ForwardStrandPosition
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position:1747070:1
position: 1747070
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 17
SIO_000628: feature:1747365-1747565:1:exon

position:1747365:1
position: 1747365
reference: sequence
type: ForwardStrandPosition
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position:1747565:1
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reference: sequence
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urn:…
SIO_000300: 18
SIO_000628: feature:1748010-1748129:1:exon

position:1748010:1
position: 1748010
reference: sequence
type: ForwardStrandPosition
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position:1748129:1
position: 1748129
reference: sequence
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urn:…
SIO_000300: 19
SIO_000628: feature:1748449-1748629:1:exon

position:1748449:1
position: 1748449
reference: sequence
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position:1748629:1
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reference: sequence
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urn:…
SIO_000300: 20
SIO_000628: feature:1748928-1749005:1:exon

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reference: sequence
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position:1749005:1
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urn:…
SIO_000300: 21
SIO_000628: feature:1749450-1749553:1:exon

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reference: sequence
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position:1749553:1
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urn:…
SIO_000300: 22
SIO_000628: feature:1749796-1749892:1:exon

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position:1749892:1
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urn:…
SIO_000300: 23
SIO_000628: feature:1749999-1750068:1:exon

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reference: sequence
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position:1750068:1
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urn:…
SIO_000300: 24
SIO_000628: feature:1750814-1750971:1:exon

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urn:…
SIO_000300: 25
SIO_000628: feature:1751456-1751552:1:exon

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reference: sequence
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position:1751552:1
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reference: sequence
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urn:…
SIO_000300: 26
SIO_000628: feature:1751958-1752182:1:exon

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reference: sequence
type: ForwardStrandPosition
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position:1752182:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 27
SIO_000628: feature:1752858-1753006:1:exon

position:1752858:1
position: 1752858
reference: sequence
type: ForwardStrandPosition
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position:1753006:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 28
SIO_000628: feature:1754660-1754774:1:exon

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reference: sequence
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position:1754774:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 29
SIO_000628: feature:1754930-1755091:1:exon

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position: 1754930
reference: sequence
type: ForwardStrandPosition
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position:1755091:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 30
SIO_000628: feature:1755398-1755486:1:exon

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position: 1755398
reference: sequence
type: ForwardStrandPosition
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position:1755486:1
position: 1755486
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 31
SIO_000628: feature:1756378-1756565:1:exon

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position: 1756378
reference: sequence
type: ForwardStrandPosition
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position:1756565:1
position: 1756565
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 32
SIO_000628: feature:1756917-1757528:1:exon

position:1756917:1
position: 1756917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLCG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: PLCG1
product: phospholipase C gamma 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 76 long SRA reads, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030502783.1
SIO_010081: PLCG1
subclass of: SO_0000673
so part of: PLCG1
location: join(1712696..1713015,1733088..1733240,1734316..1734409,1734944..1734991,1738882..1738966,1739726..1739809,1740036..1740058,1741130..1741202,1742237..1742338,1742740..1742858,1743616..1743701,1743981..1744101,1744407..1744575,1745019..1745141,1746047..1746148,1746883..1747070,1747365..1747565,1748010..1748129,1748449..1748629,1748928..1749005,1749450..1749553,1749796..1749892,1749999..1750068,1750814..1750971,1751456..1751552,1751958..1752182,1752858..1753006,1754660..1754774,1754930..1755091,1755398..1755486,1756378..1756565,1756920..1757528)
location: region:1712696-1757528:1
so has part: feature:1712696-1713015:1:exon
so has part: feature:1733088-1733240:1:exon
so has part: feature:1734316-1734409:1:exon
so has part: feature:1734944-1734991:1:exon
so has part: feature:1738882-1738966:1:exon
so has part: feature:1739726-1739809:1:exon
so has part: feature:1740036-1740058:1:exon
so has part: feature:1741130-1741202:1:exon
so has part: feature:1742237-1742338:1:exon
so has part: feature:1742740-1742858:1:exon
so has part: feature:1743616-1743701:1:exon
so has part: feature:1743981-1744101:1:exon
so has part: feature:1744407-1744575:1:exon
so has part: feature:1745019-1745141:1:exon
so has part: feature:1746047-1746148:1:exon
so has part: feature:1746883-1747070:1:exon
so has part: feature:1747365-1747565:1:exon
so has part: feature:1748010-1748129:1:exon
so has part: feature:1748449-1748629:1:exon
so has part: feature:1748928-1749005:1:exon
so has part: feature:1749450-1749553:1:exon
so has part: feature:1749796-1749892:1:exon
so has part: feature:1749999-1750068:1:exon
so has part: feature:1750814-1750971:1:exon
so has part: feature:1751456-1751552:1:exon
so has part: feature:1751958-1752182:1:exon
so has part: feature:1752858-1753006:1:exon
so has part: feature:1754660-1754774:1:exon
so has part: feature:1754930-1755091:1:exon
so has part: feature:1755398-1755486:1:exon
so has part: feature:1756378-1756565:1:exon
so has part: feature:1756920-1757528:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1712696-1713015:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1733088-1733240:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1734316-1734409:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1734944-1734991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1738882-1738966:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1739726-1739809:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1740036-1740058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1741130-1741202:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1742237-1742338:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1742740-1742858:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1743616-1743701:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1743981-1744101:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1744407-1744575:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1745019-1745141:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1746047-1746148:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1746883-1747070:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1747365-1747565:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1748010-1748129:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1748449-1748629:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1748928-1749005:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1749450-1749553:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1749796-1749892:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1749999-1750068:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1750814-1750971:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1751456-1751552:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1751958-1752182:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1752858-1753006:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1754660-1754774:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1754930-1755091:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1755398-1755486:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1756378-1756565:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1756920-1757528:1:exon

position:1756920:1
position: 1756920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLCG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: PLCG1
product: phospholipase C gamma 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 84 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030502784.1
SIO_010081: PLCG1
subclass of: SO_0000673
so part of: PLCG1
location: join(1712696..1713015,1733088..1733240,1734316..1734409,1734944..1734991,1738882..1738966,1739726..1739809,1740036..1740058,1741130..1741202,1742237..1742338,1742740..1742858,1743616..1743701,1743981..1744101,1744407..1744575,1745019..1745141,1746047..1746148,1746883..1747070,1747365..1747565,1748010..1748129,1748449..1748629,1748928..1749005,1749450..1749553,1749796..1749892,1749999..1750068,1750814..1750971,1751456..1751552,1751958..1752182,1752858..1753006,1754660..1754774,1754930..1755091,1755398..1755486,1756381..1756565,1756917..1757528)
location: region:1712696-1757528:1
so has part: feature:1712696-1713015:1:exon
so has part: feature:1733088-1733240:1:exon
so has part: feature:1734316-1734409:1:exon
so has part: feature:1734944-1734991:1:exon
so has part: feature:1738882-1738966:1:exon
so has part: feature:1739726-1739809:1:exon
so has part: feature:1740036-1740058:1:exon
so has part: feature:1741130-1741202:1:exon
so has part: feature:1742237-1742338:1:exon
so has part: feature:1742740-1742858:1:exon
so has part: feature:1743616-1743701:1:exon
so has part: feature:1743981-1744101:1:exon
so has part: feature:1744407-1744575:1:exon
so has part: feature:1745019-1745141:1:exon
so has part: feature:1746047-1746148:1:exon
so has part: feature:1746883-1747070:1:exon
so has part: feature:1747365-1747565:1:exon
so has part: feature:1748010-1748129:1:exon
so has part: feature:1748449-1748629:1:exon
so has part: feature:1748928-1749005:1:exon
so has part: feature:1749450-1749553:1:exon
so has part: feature:1749796-1749892:1:exon
so has part: feature:1749999-1750068:1:exon
so has part: feature:1750814-1750971:1:exon
so has part: feature:1751456-1751552:1:exon
so has part: feature:1751958-1752182:1:exon
so has part: feature:1752858-1753006:1:exon
so has part: feature:1754660-1754774:1:exon
so has part: feature:1754930-1755091:1:exon
so has part: feature:1755398-1755486:1:exon
so has part: feature:1756381-1756565:1:exon
so has part: feature:1756917-1757528:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1712696-1713015:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1733088-1733240:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1734316-1734409:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1734944-1734991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1738882-1738966:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1739726-1739809:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1740036-1740058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1741130-1741202:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1742237-1742338:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1742740-1742858:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1743616-1743701:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1743981-1744101:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1744407-1744575:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1745019-1745141:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1746047-1746148:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1746883-1747070:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1747365-1747565:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1748010-1748129:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1748449-1748629:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1748928-1749005:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1749450-1749553:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1749796-1749892:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1749999-1750068:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1750814-1750971:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1751456-1751552:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1751958-1752182:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1752858-1753006:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1754660-1754774:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1754930-1755091:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1755398-1755486:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1756381-1756565:1:exon

position:1756381:1
position: 1756381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1756917-1757528:1:exon

PLCG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: PLCG1
product: phospholipase C gamma 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 74 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030502786.1
SIO_010081: PLCG1
subclass of: SO_0000673
so part of: PLCG1
location: join(1712696..1713015,1733088..1733240,1734316..1734409,1734944..1734991,1738882..1738966,1739726..1739809,1740036..1740058,1741130..1741202,1742237..1742338,1742740..1742858,1743616..1743701,1743981..1744101,1744407..1744575,1745019..1745141,1746047..1746148,1746883..1747070,1747365..1747565,1748010..1748129,1748449..1748629,1748928..1749005,1749450..1749553,1749796..1749892,1749999..1750068,1750814..1750971,1751456..1751552,1751958..1752182,1752858..1753006,1754660..1754774,1754930..1755091,1755398..1755486,1756381..1756565,1756920..1757528)
location: region:1712696-1757528:1
so has part: feature:1712696-1713015:1:exon
so has part: feature:1733088-1733240:1:exon
so has part: feature:1734316-1734409:1:exon
so has part: feature:1734944-1734991:1:exon
so has part: feature:1738882-1738966:1:exon
so has part: feature:1739726-1739809:1:exon
so has part: feature:1740036-1740058:1:exon
so has part: feature:1741130-1741202:1:exon
so has part: feature:1742237-1742338:1:exon
so has part: feature:1742740-1742858:1:exon
so has part: feature:1743616-1743701:1:exon
so has part: feature:1743981-1744101:1:exon
so has part: feature:1744407-1744575:1:exon
so has part: feature:1745019-1745141:1:exon
so has part: feature:1746047-1746148:1:exon
so has part: feature:1746883-1747070:1:exon
so has part: feature:1747365-1747565:1:exon
so has part: feature:1748010-1748129:1:exon
so has part: feature:1748449-1748629:1:exon
so has part: feature:1748928-1749005:1:exon
so has part: feature:1749450-1749553:1:exon
so has part: feature:1749796-1749892:1:exon
so has part: feature:1749999-1750068:1:exon
so has part: feature:1750814-1750971:1:exon
so has part: feature:1751456-1751552:1:exon
so has part: feature:1751958-1752182:1:exon
so has part: feature:1752858-1753006:1:exon
so has part: feature:1754660-1754774:1:exon
so has part: feature:1754930-1755091:1:exon
so has part: feature:1755398-1755486:1:exon
so has part: feature:1756381-1756565:1:exon
so has part: feature:1756920-1757528:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1712696-1713015:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1733088-1733240:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1734316-1734409:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1734944-1734991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1738882-1738966:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1739726-1739809:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1740036-1740058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1741130-1741202:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1742237-1742338:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1742740-1742858:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1743616-1743701:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1743981-1744101:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1744407-1744575:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1745019-1745141:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1746047-1746148:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1746883-1747070:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1747365-1747565:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1748010-1748129:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1748449-1748629:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1748928-1749005:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1749450-1749553:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1749796-1749892:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1749999-1750068:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1750814-1750971:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1751456-1751552:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1751958-1752182:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1752858-1753006:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1754660-1754774:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1754930-1755091:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1755398-1755486:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1756381-1756565:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1756920-1757528:1:exon

PLCG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: PLCG1
product: phospholipase C gamma 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 81 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030502785.1
SIO_010081: PLCG1
subclass of: SO_0000673
so part of: PLCG1
location: join(1712696..1713015,1733088..1733240,1734316..1734409,1734944..1734991,1738882..1738966,1739726..1739809,1740036..1740058,1741130..1741202,1742237..1742338,1742740..1742858,1743616..1743701,1743981..1744101,1744407..1744575,1745019..1745141,1746047..1746148,1746883..1747070,1747365..1747565,1748010..1748129,1748449..1748629,1748928..1749005,1749450..1749553,1749796..1749892,1750002..1750068,1750814..1750971,1751456..1751552,1751958..1752182,1752858..1753006,1754660..1754774,1754930..1755091,1755398..1755486,1756378..1756565,1756917..1757528)
location: region:1712696-1757528:1
so has part: feature:1712696-1713015:1:exon
so has part: feature:1733088-1733240:1:exon
so has part: feature:1734316-1734409:1:exon
so has part: feature:1734944-1734991:1:exon
so has part: feature:1738882-1738966:1:exon
so has part: feature:1739726-1739809:1:exon
so has part: feature:1740036-1740058:1:exon
so has part: feature:1741130-1741202:1:exon
so has part: feature:1742237-1742338:1:exon
so has part: feature:1742740-1742858:1:exon
so has part: feature:1743616-1743701:1:exon
so has part: feature:1743981-1744101:1:exon
so has part: feature:1744407-1744575:1:exon
so has part: feature:1745019-1745141:1:exon
so has part: feature:1746047-1746148:1:exon
so has part: feature:1746883-1747070:1:exon
so has part: feature:1747365-1747565:1:exon
so has part: feature:1748010-1748129:1:exon
so has part: feature:1748449-1748629:1:exon
so has part: feature:1748928-1749005:1:exon
so has part: feature:1749450-1749553:1:exon
so has part: feature:1749796-1749892:1:exon
so has part: feature:1750002-1750068:1:exon
so has part: feature:1750814-1750971:1:exon
so has part: feature:1751456-1751552:1:exon
so has part: feature:1751958-1752182:1:exon
so has part: feature:1752858-1753006:1:exon
so has part: feature:1754660-1754774:1:exon
so has part: feature:1754930-1755091:1:exon
so has part: feature:1755398-1755486:1:exon
so has part: feature:1756378-1756565:1:exon
so has part: feature:1756917-1757528:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1712696-1713015:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1733088-1733240:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1734316-1734409:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1734944-1734991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1738882-1738966:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1739726-1739809:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1740036-1740058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1741130-1741202:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1742237-1742338:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1742740-1742858:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1743616-1743701:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1743981-1744101:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1744407-1744575:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1745019-1745141:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1746047-1746148:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1746883-1747070:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1747365-1747565:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1748010-1748129:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1748449-1748629:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1748928-1749005:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1749450-1749553:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1749796-1749892:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1750002-1750068:1:exon

position:1750002:1
position: 1750002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1750814-1750971:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1751456-1751552:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1751958-1752182:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1752858-1753006:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1754660-1754774:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1754930-1755091:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1755398-1755486:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1756378-1756565:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1756917-1757528:1:exon

PLCG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: PLCG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 isoform X1
translation: MAAGPGSGAGAPSEAEAAQLCRSLEVGTVMTLFYSKKSQRPERKTFQVKLETRQVTWSRGSDKIEGAVDIREIKEIRPGRNSRDFDRYQEDPCFRPDHSHCFVVLYGTEFRLKTLSLQATSEDEVNMWIKGLNWLVADTLRAATPLQIERWLRKQFYSLDRNREDRISAKDLKNMLSQVNYRVPNMRFLRERLTDVEQRSGDITYGQFAQLYRSLMFSAQKMMDVPFLDRGGERSEHFRVSLLELQKFLLEYQRELWAADTLQVQEFMFNFLRDPLREIDEPYFSLDEFLTFLFSKENSIWNSQLDMVCLENMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGPDGMPVIYHGHTLTTKIKFSDVLVTIKEHAFVTSDFPVILSIEDHCSIAQQRNMAQNFKKVFGDMLLTKPVDISADGLPSPNQLRRKILIKHKKLAEGSAYEELPTSVMYSENDISNSIKNGILYLEDPINHEWNPHYFVLTSSKIYYSGETTSDQGNEDEEEQKEVSNSTELHSTEKWFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHCRIHSRQDAGSPKFFLTDNLVFDSLYDLITHYQEVPLRCNEFEMRLTEPVPQTNAHESKEWYHANLTRAQAEHMLMRVPRDGAFLVRKRSEPSSYAISFRAEGKIKHCRVQQEGQTVLLGNSEFESLVDLISYYEKHPLYRKMKLRYPINEETLEKIGTAEPDYGALYEGRHPGFYVEANPMPTFKCAVKALFDYKAQREDELTFTKNAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEITGPGSLEPEREQLDENSPLGDLLGGVLDVPSCQIAIRPEGKNNRLFVFSISMASVSRVSLDVAADTHEDLLDWVKKIREAAQTADARLSEGKMMERRKKIALELSELVVYCRPVPFDEEKIGTERACYRDMSSFPETKAEKYVNKIKGKKFLQYNRLQLSRIYPKGQRLDSSNYDPLPMWICGSQLVALNFQTPDKPMQMNQALFMSSGQCGYVLQPTNMRDDIFDPFDKSTLRGVEPLSISIEVLGARHLPKNGRGIVCPFVEVEVSGAEYDNAKQKTEIVADNGLNPLWSPKQFHFQVSNPDFAFLRFVVYEEDMFSDENFLAQATFPVKGLKTGFRAVPLKNNYSENLELASLLVKIDIFPSKQENGEINLFSGAVLRDRAGDAATQLLVGRGREGSFEARYQQPFEDFRVSPEQLADHFESRERSRALRRTRINGDNRL
SIO_010081: PLCG1
subclass of: SO_0000673
so part of: PLCG1
location: join(1712814..1713015,1733088..1733240,1734316..1734409,1734944..1734991,1738882..1738966,1739726..1739809,1740036..1740058,1741130..1741202,1742237..1742338,1742740..1742858,1743616..1743701,1743981..1744101,1744407..1744575,1745019..1745141,1746047..1746148,1746883..1747070,1747365..1747565,1748010..1748129,1748449..1748629,1748928..1749005,1749450..1749553,1749796..1749892,1749999..1750068,1750814..1750971,1751456..1751552,1751958..1752182,1752858..1753006,1754660..1754774,1754930..1755091,1755398..1755486,1756378..1756565,1756917..1756962)
location: region:1712814-1756962:1
so has part: feature:1712814-1713015:1:exon
so has part: feature:1733088-1733240:1:exon
so has part: feature:1734316-1734409:1:exon
so has part: feature:1734944-1734991:1:exon
so has part: feature:1738882-1738966:1:exon
so has part: feature:1739726-1739809:1:exon
so has part: feature:1740036-1740058:1:exon
so has part: feature:1741130-1741202:1:exon
so has part: feature:1742237-1742338:1:exon
so has part: feature:1742740-1742858:1:exon
so has part: feature:1743616-1743701:1:exon
so has part: feature:1743981-1744101:1:exon
so has part: feature:1744407-1744575:1:exon
so has part: feature:1745019-1745141:1:exon
so has part: feature:1746047-1746148:1:exon
so has part: feature:1746883-1747070:1:exon
so has part: feature:1747365-1747565:1:exon
so has part: feature:1748010-1748129:1:exon
so has part: feature:1748449-1748629:1:exon
so has part: feature:1748928-1749005:1:exon
so has part: feature:1749450-1749553:1:exon
so has part: feature:1749796-1749892:1:exon
so has part: feature:1749999-1750068:1:exon
so has part: feature:1750814-1750971:1:exon
so has part: feature:1751456-1751552:1:exon
so has part: feature:1751958-1752182:1:exon
so has part: feature:1752858-1753006:1:exon
so has part: feature:1754660-1754774:1:exon
so has part: feature:1754930-1755091:1:exon
so has part: feature:1755398-1755486:1:exon
so has part: feature:1756378-1756565:1:exon
so has part: feature:1756917-1756962:1:exon

XP_030358642.1
type: Protein
SIO_000068: ncbiprotein

position:1712814:1
position: 1712814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1756962:1
position: 1756962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1712814-1713015:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1733088-1733240:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1734316-1734409:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1734944-1734991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1738882-1738966:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1739726-1739809:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1740036-1740058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1741130-1741202:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1742237-1742338:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1742740-1742858:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1743616-1743701:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1743981-1744101:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1744407-1744575:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1745019-1745141:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1746047-1746148:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1746883-1747070:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1747365-1747565:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1748010-1748129:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1748449-1748629:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1748928-1749005:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1749450-1749553:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1749796-1749892:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1749999-1750068:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1750814-1750971:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1751456-1751552:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1751958-1752182:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1752858-1753006:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1754660-1754774:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1754930-1755091:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1755398-1755486:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1756378-1756565:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1756917-1756962:1:exon

PLCG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: PLCG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 isoform X2
translation: MAAGPGSGAGAPSEAEAAQLCRSLEVGTVMTLFYSKKSQRPERKTFQVKLETRQVTWSRGSDKIEGAVDIREIKEIRPGRNSRDFDRYQEDPCFRPDHSHCFVVLYGTEFRLKTLSLQATSEDEVNMWIKGLNWLVADTLRAATPLQIERWLRKQFYSLDRNREDRISAKDLKNMLSQVNYRVPNMRFLRERLTDVEQRSGDITYGQFAQLYRSLMFSAQKMMDVPFLDRGGERSEHFRVSLLELQKFLLEYQRELWAADTLQVQEFMFNFLRDPLREIDEPYFSLDEFLTFLFSKENSIWNSQLDMVCLENMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGPDGMPVIYHGHTLTTKIKFSDVLVTIKEHAFVTSDFPVILSIEDHCSIAQQRNMAQNFKKVFGDMLLTKPVDISADGLPSPNQLRRKILIKHKKLAEGSAYEELPTSVMYSENDISNSIKNGILYLEDPINHEWNPHYFVLTSSKIYYSGETTSDQGNEDEEEQKEVSNSTELHSTEKWFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHCRIHSRQDAGSPKFFLTDNLVFDSLYDLITHYQEVPLRCNEFEMRLTEPVPQTNAHESKEWYHANLTRAQAEHMLMRVPRDGAFLVRKRSEPSSYAISFRAEGKIKHCRVQQEGQTVLLGNSEFESLVDLISYYEKHPLYRKMKLRYPINEETLEKIGTAEPDYGALYEGRHPGFYVEANPMPTFKCAVKALFDYKAQREDELTFTKNAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEITGPGSLEPEREQLDENSPLGDLLGGVLDVPSCQIAIRPEGKNNRLFVFSISMASVSRVSLDVAADTHEDLLDWVKKIREAAQTADARLSEGKMMERRKKIALELSELVVYCRPVPFDEEKIGTERACYRDMSSFPETKAEKYVNKIKGKKFLQYNRLQLSRIYPKGQRLDSSNYDPLPMWICGSQLVALNFQTPDKPMQMNQALFMSSGQCGYVLQPTNMRDDIFDPFDKSTLRGVEPLSISIEVLGARHLPKNGRGIVCPFVEVEVSGAEYDNAKQKTEIVADNGLNPLWSPKQFHFQVSNPDFAFLRFVVYEEDMFSDENFLAQATFPVKGLKTGFRAVPLKNNYSENLELASLLVKIDIFPSKQENGEINLFSGAVLRDRAGDAATQLLVGRGREGSFEARYQQPFEDFRVSPEQLADHFESRERRALRRTRINGDNRL
SIO_010081: PLCG1
subclass of: SO_0000673
so part of: PLCG1
location: join(1712814..1713015,1733088..1733240,1734316..1734409,1734944..1734991,1738882..1738966,1739726..1739809,1740036..1740058,1741130..1741202,1742237..1742338,1742740..1742858,1743616..1743701,1743981..1744101,1744407..1744575,1745019..1745141,1746047..1746148,1746883..1747070,1747365..1747565,1748010..1748129,1748449..1748629,1748928..1749005,1749450..1749553,1749796..1749892,1749999..1750068,1750814..1750971,1751456..1751552,1751958..1752182,1752858..1753006,1754660..1754774,1754930..1755091,1755398..1755486,1756378..1756565,1756920..1756962)
location: region:1712814-1756962:1
so has part: feature:1712814-1713015:1:exon
so has part: feature:1733088-1733240:1:exon
so has part: feature:1734316-1734409:1:exon
so has part: feature:1734944-1734991:1:exon
so has part: feature:1738882-1738966:1:exon
so has part: feature:1739726-1739809:1:exon
so has part: feature:1740036-1740058:1:exon
so has part: feature:1741130-1741202:1:exon
so has part: feature:1742237-1742338:1:exon
so has part: feature:1742740-1742858:1:exon
so has part: feature:1743616-1743701:1:exon
so has part: feature:1743981-1744101:1:exon
so has part: feature:1744407-1744575:1:exon
so has part: feature:1745019-1745141:1:exon
so has part: feature:1746047-1746148:1:exon
so has part: feature:1746883-1747070:1:exon
so has part: feature:1747365-1747565:1:exon
so has part: feature:1748010-1748129:1:exon
so has part: feature:1748449-1748629:1:exon
so has part: feature:1748928-1749005:1:exon
so has part: feature:1749450-1749553:1:exon
so has part: feature:1749796-1749892:1:exon
so has part: feature:1749999-1750068:1:exon
so has part: feature:1750814-1750971:1:exon
so has part: feature:1751456-1751552:1:exon
so has part: feature:1751958-1752182:1:exon
so has part: feature:1752858-1753006:1:exon
so has part: feature:1754660-1754774:1:exon
so has part: feature:1754930-1755091:1:exon
so has part: feature:1755398-1755486:1:exon
so has part: feature:1756378-1756565:1:exon
so has part: feature:1756920-1756962:1:exon

XP_030358643.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1712814-1713015:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1733088-1733240:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1734316-1734409:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1734944-1734991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1738882-1738966:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1739726-1739809:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1740036-1740058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1741130-1741202:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1742237-1742338:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1742740-1742858:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1743616-1743701:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1743981-1744101:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1744407-1744575:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1745019-1745141:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1746047-1746148:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1746883-1747070:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1747365-1747565:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1748010-1748129:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1748449-1748629:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1748928-1749005:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1749450-1749553:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1749796-1749892:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1749999-1750068:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1750814-1750971:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1751456-1751552:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1751958-1752182:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1752858-1753006:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1754660-1754774:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1754930-1755091:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1755398-1755486:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1756378-1756565:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1756920-1756962:1:exon

PLCG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: PLCG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 isoform X3
translation: MAAGPGSGAGAPSEAEAAQLCRSLEVGTVMTLFYSKKSQRPERKTFQVKLETRQVTWSRGSDKIEGAVDIREIKEIRPGRNSRDFDRYQEDPCFRPDHSHCFVVLYGTEFRLKTLSLQATSEDEVNMWIKGLNWLVADTLRAATPLQIERWLRKQFYSLDRNREDRISAKDLKNMLSQVNYRVPNMRFLRERLTDVEQRSGDITYGQFAQLYRSLMFSAQKMMDVPFLDRGGERSEHFRVSLLELQKFLLEYQRELWAADTLQVQEFMFNFLRDPLREIDEPYFSLDEFLTFLFSKENSIWNSQLDMVCLENMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGPDGMPVIYHGHTLTTKIKFSDVLVTIKEHAFVTSDFPVILSIEDHCSIAQQRNMAQNFKKVFGDMLLTKPVDISADGLPSPNQLRRKILIKHKKLAEGSAYEELPTSVMYSENDISNSIKNGILYLEDPINHEWNPHYFVLTSSKIYYSGETTSDQGNEDEEEQKEVSNSTELHSTEKWFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHCRIHSRQDAGSPKFFLTDNLVFDSLYDLITHYQEVPLRCNEFEMRLTEPVPQTNAHESKEWYHANLTRAQAEHMLMRVPRDGAFLVRKRSEPSSYAISFRAEGKIKHCRVQQEGQTVLLGNSEFESLVDLISYYEKHPLYRKMKLRYPINEETLEKIGTAEPDYGALYEGRHPGFYVEANPMPTFKCAVKALFDYKAQREDELTFTKNAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEITGPGSLEPEREQLDENSPLGDLLGGVLDVPSCQIAIRPEGKNNRLFVFSISMASVSRVSLDVAADTHEDLLDWVKKIREAAQTADARLSEGKMMERRKKIALELSELVVYCRPVPFDEEKIGTERACYRDMSSFPETKAEKYVNKIKGKKFLQYNRLQLSRIYPKGQRLDSSNYDPLPMWICGSQLVALNFQTPDKPMQMNQALFMSSGQCGYVLQPTNMRDDIFDPFDKSTLRGVEPLSISIEVLGARHLPKNGRGIVCPFVEVEVSGAEYDNAKQKTEIVADNGLNPLWSPKQFHFQVSNPDFAFLRFVVYEEDMFSDENFLAQATFPVKGLKTGFRAVPLKNNYSENLELASLLVKIDIFPSKENGEINLFSGAVLRDRAGDAATQLLVGRGREGSFEARYQQPFEDFRVSPEQLADHFESRERSRALRRTRINGDNRL
SIO_010081: PLCG1
subclass of: SO_0000673
so part of: PLCG1
location: join(1712814..1713015,1733088..1733240,1734316..1734409,1734944..1734991,1738882..1738966,1739726..1739809,1740036..1740058,1741130..1741202,1742237..1742338,1742740..1742858,1743616..1743701,1743981..1744101,1744407..1744575,1745019..1745141,1746047..1746148,1746883..1747070,1747365..1747565,1748010..1748129,1748449..1748629,1748928..1749005,1749450..1749553,1749796..1749892,1749999..1750068,1750814..1750971,1751456..1751552,1751958..1752182,1752858..1753006,1754660..1754774,1754930..1755091,1755398..1755486,1756381..1756565,1756917..1756962)
location: region:1712814-1756962:1
so has part: feature:1712814-1713015:1:exon
so has part: feature:1733088-1733240:1:exon
so has part: feature:1734316-1734409:1:exon
so has part: feature:1734944-1734991:1:exon
so has part: feature:1738882-1738966:1:exon
so has part: feature:1739726-1739809:1:exon
so has part: feature:1740036-1740058:1:exon
so has part: feature:1741130-1741202:1:exon
so has part: feature:1742237-1742338:1:exon
so has part: feature:1742740-1742858:1:exon
so has part: feature:1743616-1743701:1:exon
so has part: feature:1743981-1744101:1:exon
so has part: feature:1744407-1744575:1:exon
so has part: feature:1745019-1745141:1:exon
so has part: feature:1746047-1746148:1:exon
so has part: feature:1746883-1747070:1:exon
so has part: feature:1747365-1747565:1:exon
so has part: feature:1748010-1748129:1:exon
so has part: feature:1748449-1748629:1:exon
so has part: feature:1748928-1749005:1:exon
so has part: feature:1749450-1749553:1:exon
so has part: feature:1749796-1749892:1:exon
so has part: feature:1749999-1750068:1:exon
so has part: feature:1750814-1750971:1:exon
so has part: feature:1751456-1751552:1:exon
so has part: feature:1751958-1752182:1:exon
so has part: feature:1752858-1753006:1:exon
so has part: feature:1754660-1754774:1:exon
so has part: feature:1754930-1755091:1:exon
so has part: feature:1755398-1755486:1:exon
so has part: feature:1756381-1756565:1:exon
so has part: feature:1756917-1756962:1:exon

XP_030358644.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1712814-1713015:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1733088-1733240:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1734316-1734409:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1734944-1734991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1738882-1738966:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1739726-1739809:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1740036-1740058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1741130-1741202:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1742237-1742338:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1742740-1742858:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1743616-1743701:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1743981-1744101:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1744407-1744575:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1745019-1745141:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1746047-1746148:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1746883-1747070:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1747365-1747565:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1748010-1748129:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1748449-1748629:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1748928-1749005:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1749450-1749553:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1749796-1749892:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1749999-1750068:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1750814-1750971:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1751456-1751552:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1751958-1752182:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1752858-1753006:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1754660-1754774:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1754930-1755091:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1755398-1755486:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1756381-1756565:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1756917-1756962:1:exon

PLCG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: PLCG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 isoform X5
translation: MAAGPGSGAGAPSEAEAAQLCRSLEVGTVMTLFYSKKSQRPERKTFQVKLETRQVTWSRGSDKIEGAVDIREIKEIRPGRNSRDFDRYQEDPCFRPDHSHCFVVLYGTEFRLKTLSLQATSEDEVNMWIKGLNWLVADTLRAATPLQIERWLRKQFYSLDRNREDRISAKDLKNMLSQVNYRVPNMRFLRERLTDVEQRSGDITYGQFAQLYRSLMFSAQKMMDVPFLDRGGERSEHFRVSLLELQKFLLEYQRELWAADTLQVQEFMFNFLRDPLREIDEPYFSLDEFLTFLFSKENSIWNSQLDMVCLENMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGPDGMPVIYHGHTLTTKIKFSDVLVTIKEHAFVTSDFPVILSIEDHCSIAQQRNMAQNFKKVFGDMLLTKPVDISADGLPSPNQLRRKILIKHKKLAEGSAYEELPTSVMYSENDISNSIKNGILYLEDPINHEWNPHYFVLTSSKIYYSGETTSDQGNEDEEEQKEVSNSTELHSTEKWFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHCRIHSRQDAGSPKFFLTDNLVFDSLYDLITHYQEVPLRCNEFEMRLTEPVPQTNAHESKEWYHANLTRAQAEHMLMRVPRDGAFLVRKRSEPSSYAISFRAEGKIKHCRVQQEGQTVLLGNSEFESLVDLISYYEKHPLYRKMKLRYPINEETLEKIGTAEPDYGALYEGRHPGFYVEANPMPTFKCAVKALFDYKAQREDELTFTKNAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEITGPGSLEPEREQLDENSPLGDLLGGVLDVPSCQIAIRPEGKNNRLFVFSISMASVSRVSLDVAADTHEDLLDWVKKIREAAQTADARLSEGKMMERRKKIALELSELVVYCRPVPFDEEKIGTERACYRDMSSFPETKAEKYVNKIKGKKFLQYNRLQLSRIYPKGQRLDSSNYDPLPMWICGSQLVALNFQTPDKPMQMNQALFMSSGQCGYVLQPTNMRDDIFDPFDKSTLRGVEPLSISIEVLGARHLPKNGRGIVCPFVEVEVSGAEYDNAKQKTEIVADNGLNPLWSPKQFHFQVSNPDFAFLRFVVYEEDMFSDENFLAQATFPVKGLKTGFRAVPLKNNYSENLELASLLVKIDIFPSKENGEINLFSGAVLRDRAGDAATQLLVGRGREGSFEARYQQPFEDFRVSPEQLADHFESRERRALRRTRINGDNRL
SIO_010081: PLCG1
subclass of: SO_0000673
so part of: PLCG1
location: join(1712814..1713015,1733088..1733240,1734316..1734409,1734944..1734991,1738882..1738966,1739726..1739809,1740036..1740058,1741130..1741202,1742237..1742338,1742740..1742858,1743616..1743701,1743981..1744101,1744407..1744575,1745019..1745141,1746047..1746148,1746883..1747070,1747365..1747565,1748010..1748129,1748449..1748629,1748928..1749005,1749450..1749553,1749796..1749892,1749999..1750068,1750814..1750971,1751456..1751552,1751958..1752182,1752858..1753006,1754660..1754774,1754930..1755091,1755398..1755486,1756381..1756565,1756920..1756962)
location: region:1712814-1756962:1
so has part: feature:1712814-1713015:1:exon
so has part: feature:1733088-1733240:1:exon
so has part: feature:1734316-1734409:1:exon
so has part: feature:1734944-1734991:1:exon
so has part: feature:1738882-1738966:1:exon
so has part: feature:1739726-1739809:1:exon
so has part: feature:1740036-1740058:1:exon
so has part: feature:1741130-1741202:1:exon
so has part: feature:1742237-1742338:1:exon
so has part: feature:1742740-1742858:1:exon
so has part: feature:1743616-1743701:1:exon
so has part: feature:1743981-1744101:1:exon
so has part: feature:1744407-1744575:1:exon
so has part: feature:1745019-1745141:1:exon
so has part: feature:1746047-1746148:1:exon
so has part: feature:1746883-1747070:1:exon
so has part: feature:1747365-1747565:1:exon
so has part: feature:1748010-1748129:1:exon
so has part: feature:1748449-1748629:1:exon
so has part: feature:1748928-1749005:1:exon
so has part: feature:1749450-1749553:1:exon
so has part: feature:1749796-1749892:1:exon
so has part: feature:1749999-1750068:1:exon
so has part: feature:1750814-1750971:1:exon
so has part: feature:1751456-1751552:1:exon
so has part: feature:1751958-1752182:1:exon
so has part: feature:1752858-1753006:1:exon
so has part: feature:1754660-1754774:1:exon
so has part: feature:1754930-1755091:1:exon
so has part: feature:1755398-1755486:1:exon
so has part: feature:1756381-1756565:1:exon
so has part: feature:1756920-1756962:1:exon

XP_030358646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1712814-1713015:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1733088-1733240:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1734316-1734409:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1734944-1734991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1738882-1738966:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1739726-1739809:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1740036-1740058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1741130-1741202:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1742237-1742338:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1742740-1742858:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1743616-1743701:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1743981-1744101:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1744407-1744575:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1745019-1745141:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1746047-1746148:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1746883-1747070:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1747365-1747565:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1748010-1748129:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1748449-1748629:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1748928-1749005:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1749450-1749553:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1749796-1749892:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1749999-1750068:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1750814-1750971:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1751456-1751552:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1751958-1752182:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1752858-1753006:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1754660-1754774:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1754930-1755091:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1755398-1755486:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1756381-1756565:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1756920-1756962:1:exon

PLCG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: PLCG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 isoform X4
translation: MAAGPGSGAGAPSEAEAAQLCRSLEVGTVMTLFYSKKSQRPERKTFQVKLETRQVTWSRGSDKIEGAVDIREIKEIRPGRNSRDFDRYQEDPCFRPDHSHCFVVLYGTEFRLKTLSLQATSEDEVNMWIKGLNWLVADTLRAATPLQIERWLRKQFYSLDRNREDRISAKDLKNMLSQVNYRVPNMRFLRERLTDVEQRSGDITYGQFAQLYRSLMFSAQKMMDVPFLDRGGERSEHFRVSLLELQKFLLEYQRELWAADTLQVQEFMFNFLRDPLREIDEPYFSLDEFLTFLFSKENSIWNSQLDMVCLENMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGPDGMPVIYHGHTLTTKIKFSDVLVTIKEHAFVTSDFPVILSIEDHCSIAQQRNMAQNFKKVFGDMLLTKPVDISADGLPSPNQLRRKILIKHKKLAEGSAYEELPTSVMYSENDISNSIKNGILYLEDPINHEWNPHYFVLTSSKIYYSGETTSDQGNEDEEEQKEVSNSTELHSTEKWFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHCRIHSRQDAGSPKFFLTDNLVFDSLYDLITHYQEVPLRCNEFEMRLTEPVPQTNAHESKEWYHANLTRAQAEHMLMRVPRDGAFLVRKRSEPSSYAISFRAEGKIKHCRVQQEGQTVLLGNSEFESLVDLISYYEKHPLYRKMKLRYPINEETLEKIGTAEPDYGALYEGRHPGFYVEANPMPTFKCAVKALFDYKAQREDELTFTKNAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEITGPGSLEPERELDENSPLGDLLGGVLDVPSCQIAIRPEGKNNRLFVFSISMASVSRVSLDVAADTHEDLLDWVKKIREAAQTADARLSEGKMMERRKKIALELSELVVYCRPVPFDEEKIGTERACYRDMSSFPETKAEKYVNKIKGKKFLQYNRLQLSRIYPKGQRLDSSNYDPLPMWICGSQLVALNFQTPDKPMQMNQALFMSSGQCGYVLQPTNMRDDIFDPFDKSTLRGVEPLSISIEVLGARHLPKNGRGIVCPFVEVEVSGAEYDNAKQKTEIVADNGLNPLWSPKQFHFQVSNPDFAFLRFVVYEEDMFSDENFLAQATFPVKGLKTGFRAVPLKNNYSENLELASLLVKIDIFPSKQENGEINLFSGAVLRDRAGDAATQLLVGRGREGSFEARYQQPFEDFRVSPEQLADHFESRERSRALRRTRINGDNRL
SIO_010081: PLCG1
subclass of: SO_0000673
so part of: PLCG1
location: join(1712814..1713015,1733088..1733240,1734316..1734409,1734944..1734991,1738882..1738966,1739726..1739809,1740036..1740058,1741130..1741202,1742237..1742338,1742740..1742858,1743616..1743701,1743981..1744101,1744407..1744575,1745019..1745141,1746047..1746148,1746883..1747070,1747365..1747565,1748010..1748129,1748449..1748629,1748928..1749005,1749450..1749553,1749796..1749892,1750002..1750068,1750814..1750971,1751456..1751552,1751958..1752182,1752858..1753006,1754660..1754774,1754930..1755091,1755398..1755486,1756378..1756565,1756917..1756962)
location: region:1712814-1756962:1
so has part: feature:1712814-1713015:1:exon
so has part: feature:1733088-1733240:1:exon
so has part: feature:1734316-1734409:1:exon
so has part: feature:1734944-1734991:1:exon
so has part: feature:1738882-1738966:1:exon
so has part: feature:1739726-1739809:1:exon
so has part: feature:1740036-1740058:1:exon
so has part: feature:1741130-1741202:1:exon
so has part: feature:1742237-1742338:1:exon
so has part: feature:1742740-1742858:1:exon
so has part: feature:1743616-1743701:1:exon
so has part: feature:1743981-1744101:1:exon
so has part: feature:1744407-1744575:1:exon
so has part: feature:1745019-1745141:1:exon
so has part: feature:1746047-1746148:1:exon
so has part: feature:1746883-1747070:1:exon
so has part: feature:1747365-1747565:1:exon
so has part: feature:1748010-1748129:1:exon
so has part: feature:1748449-1748629:1:exon
so has part: feature:1748928-1749005:1:exon
so has part: feature:1749450-1749553:1:exon
so has part: feature:1749796-1749892:1:exon
so has part: feature:1750002-1750068:1:exon
so has part: feature:1750814-1750971:1:exon
so has part: feature:1751456-1751552:1:exon
so has part: feature:1751958-1752182:1:exon
so has part: feature:1752858-1753006:1:exon
so has part: feature:1754660-1754774:1:exon
so has part: feature:1754930-1755091:1:exon
so has part: feature:1755398-1755486:1:exon
so has part: feature:1756378-1756565:1:exon
so has part: feature:1756917-1756962:1:exon

XP_030358645.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1712814-1713015:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1733088-1733240:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1734316-1734409:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1734944-1734991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1738882-1738966:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1739726-1739809:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1740036-1740058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1741130-1741202:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1742237-1742338:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1742740-1742858:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1743616-1743701:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1743981-1744101:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1744407-1744575:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1745019-1745141:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1746047-1746148:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1746883-1747070:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1747365-1747565:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1748010-1748129:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1748449-1748629:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1748928-1749005:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1749450-1749553:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1749796-1749892:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1750002-1750068:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1750814-1750971:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1751456-1751552:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1751958-1752182:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1752858-1753006:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1754660-1754774:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1754930-1755091:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1755398-1755486:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1756378-1756565:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1756917-1756962:1:exon

LOC115615090
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115615090
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1716901..1718383
location: region:1716901-1718383:1
so has part: feature:1716901-1718383:1:exon
subclass of: SO_0000011

115615090
type: Gene
SIO_000068: ncbigene

position:1716901:1
position: 1716901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1718383:1
position: 1718383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1716901-1718383:1:exon

LOC115615090
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2489341
nc RNA class: lncRNA
gene: LOC115615090
product: uncharacterized LOC115615090
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003993944.1
SIO_010081: LOC115615090
subclass of: SO_0000673
so part of: LOC115615090
location: join(1716901..1717054,1718147..1718383)
location: region:1716901-1718383:1
so has part: feature:1716901-1717054:1:exon
so has part: feature:1718147-1718383:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1716901-1717054:1:exon

position:1717054:1
position: 1717054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1718147-1718383:1:exon

position:1718147:1
position: 1718147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLCG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: PLCG1
product: phospholipase C gamma 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 80 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030502787.1
SIO_010081: PLCG1
subclass of: SO_0000673
so part of: PLCG1
location: join(1729440..1729525,1733088..1733240,1734316..1734409,1734944..1734991,1738882..1738966,1739726..1739809,1740036..1740058,1741130..1741202,1742237..1742338,1742740..1742858,1743616..1743701,1743981..1744101,1744407..1744575,1745019..1745141,1746047..1746148,1746883..1747070,1747365..1747565,1748010..1748129,1748449..1748629,1748928..1749005,1749450..1749553,1749796..1749892,1749999..1750068,1750814..1750971,1751456..1751552,1751958..1752182,1752858..1753006,1754660..1754774,1754930..1755091,1755398..1755486,1756378..1756565,1756917..1757528)
location: region:1729440-1757528:1
so has part: feature:1729440-1729525:1:exon
so has part: feature:1733088-1733240:1:exon
so has part: feature:1734316-1734409:1:exon
so has part: feature:1734944-1734991:1:exon
so has part: feature:1738882-1738966:1:exon
so has part: feature:1739726-1739809:1:exon
so has part: feature:1740036-1740058:1:exon
so has part: feature:1741130-1741202:1:exon
so has part: feature:1742237-1742338:1:exon
so has part: feature:1742740-1742858:1:exon
so has part: feature:1743616-1743701:1:exon
so has part: feature:1743981-1744101:1:exon
so has part: feature:1744407-1744575:1:exon
so has part: feature:1745019-1745141:1:exon
so has part: feature:1746047-1746148:1:exon
so has part: feature:1746883-1747070:1:exon
so has part: feature:1747365-1747565:1:exon
so has part: feature:1748010-1748129:1:exon
so has part: feature:1748449-1748629:1:exon
so has part: feature:1748928-1749005:1:exon
so has part: feature:1749450-1749553:1:exon
so has part: feature:1749796-1749892:1:exon
so has part: feature:1749999-1750068:1:exon
so has part: feature:1750814-1750971:1:exon
so has part: feature:1751456-1751552:1:exon
so has part: feature:1751958-1752182:1:exon
so has part: feature:1752858-1753006:1:exon
so has part: feature:1754660-1754774:1:exon
so has part: feature:1754930-1755091:1:exon
so has part: feature:1755398-1755486:1:exon
so has part: feature:1756378-1756565:1:exon
so has part: feature:1756917-1757528:1:exon

position:1729440:1
position: 1729440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1729440-1729525:1:exon

position:1729525:1
position: 1729525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1733088-1733240:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1734316-1734409:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1734944-1734991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1738882-1738966:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1739726-1739809:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1740036-1740058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1741130-1741202:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1742237-1742338:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1742740-1742858:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1743616-1743701:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1743981-1744101:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1744407-1744575:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1745019-1745141:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1746047-1746148:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1746883-1747070:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1747365-1747565:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1748010-1748129:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1748449-1748629:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1748928-1749005:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1749450-1749553:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1749796-1749892:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1749999-1750068:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1750814-1750971:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1751456-1751552:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1751958-1752182:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1752858-1753006:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1754660-1754774:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1754930-1755091:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1755398-1755486:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1756378-1756565:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1756917-1757528:1:exon

PLCG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: PLCG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 isoform X6
translation: MEAMGRLRQGMLMFELPASSFPKVDIREIKEIRPGRNSRDFDRYQEDPCFRPDHSHCFVVLYGTEFRLKTLSLQATSEDEVNMWIKGLNWLVADTLRAATPLQIERWLRKQFYSLDRNREDRISAKDLKNMLSQVNYRVPNMRFLRERLTDVEQRSGDITYGQFAQLYRSLMFSAQKMMDVPFLDRGGERSEHFRVSLLELQKFLLEYQRELWAADTLQVQEFMFNFLRDPLREIDEPYFSLDEFLTFLFSKENSIWNSQLDMVCLENMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGPDGMPVIYHGHTLTTKIKFSDVLVTIKEHAFVTSDFPVILSIEDHCSIAQQRNMAQNFKKVFGDMLLTKPVDISADGLPSPNQLRRKILIKHKKLAEGSAYEELPTSVMYSENDISNSIKNGILYLEDPINHEWNPHYFVLTSSKIYYSGETTSDQGNEDEEEQKEVSNSTELHSTEKWFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHCRIHSRQDAGSPKFFLTDNLVFDSLYDLITHYQEVPLRCNEFEMRLTEPVPQTNAHESKEWYHANLTRAQAEHMLMRVPRDGAFLVRKRSEPSSYAISFRAEGKIKHCRVQQEGQTVLLGNSEFESLVDLISYYEKHPLYRKMKLRYPINEETLEKIGTAEPDYGALYEGRHPGFYVEANPMPTFKCAVKALFDYKAQREDELTFTKNAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEITGPGSLEPEREQLDENSPLGDLLGGVLDVPSCQIAIRPEGKNNRLFVFSISMASVSRVSLDVAADTHEDLLDWVKKIREAAQTADARLSEGKMMERRKKIALELSELVVYCRPVPFDEEKIGTERACYRDMSSFPETKAEKYVNKIKGKKFLQYNRLQLSRIYPKGQRLDSSNYDPLPMWICGSQLVALNFQTPDKPMQMNQALFMSSGQCGYVLQPTNMRDDIFDPFDKSTLRGVEPLSISIEVLGARHLPKNGRGIVCPFVEVEVSGAEYDNAKQKTEIVADNGLNPLWSPKQFHFQVSNPDFAFLRFVVYEEDMFSDENFLAQATFPVKGLKTGFRAVPLKNNYSENLELASLLVKIDIFPSKQENGEINLFSGAVLRDRAGDAATQLLVGRGREGSFEARYQQPFEDFRVSPEQLADHFESRERSRALRRTRINGDNRL
SIO_010081: PLCG1
subclass of: SO_0000673
so part of: PLCG1
location: join(1729456..1729525,1733088..1733240,1734316..1734409,1734944..1734991,1738882..1738966,1739726..1739809,1740036..1740058,1741130..1741202,1742237..1742338,1742740..1742858,1743616..1743701,1743981..1744101,1744407..1744575,1745019..1745141,1746047..1746148,1746883..1747070,1747365..1747565,1748010..1748129,1748449..1748629,1748928..1749005,1749450..1749553,1749796..1749892,1749999..1750068,1750814..1750971,1751456..1751552,1751958..1752182,1752858..1753006,1754660..1754774,1754930..1755091,1755398..1755486,1756378..1756565,1756917..1756962)
location: region:1729456-1756962:1
so has part: feature:1729456-1729525:1:exon
so has part: feature:1733088-1733240:1:exon
so has part: feature:1734316-1734409:1:exon
so has part: feature:1734944-1734991:1:exon
so has part: feature:1738882-1738966:1:exon
so has part: feature:1739726-1739809:1:exon
so has part: feature:1740036-1740058:1:exon
so has part: feature:1741130-1741202:1:exon
so has part: feature:1742237-1742338:1:exon
so has part: feature:1742740-1742858:1:exon
so has part: feature:1743616-1743701:1:exon
so has part: feature:1743981-1744101:1:exon
so has part: feature:1744407-1744575:1:exon
so has part: feature:1745019-1745141:1:exon
so has part: feature:1746047-1746148:1:exon
so has part: feature:1746883-1747070:1:exon
so has part: feature:1747365-1747565:1:exon
so has part: feature:1748010-1748129:1:exon
so has part: feature:1748449-1748629:1:exon
so has part: feature:1748928-1749005:1:exon
so has part: feature:1749450-1749553:1:exon
so has part: feature:1749796-1749892:1:exon
so has part: feature:1749999-1750068:1:exon
so has part: feature:1750814-1750971:1:exon
so has part: feature:1751456-1751552:1:exon
so has part: feature:1751958-1752182:1:exon
so has part: feature:1752858-1753006:1:exon
so has part: feature:1754660-1754774:1:exon
so has part: feature:1754930-1755091:1:exon
so has part: feature:1755398-1755486:1:exon
so has part: feature:1756378-1756565:1:exon
so has part: feature:1756917-1756962:1:exon

XP_030358647.1
type: Protein
SIO_000068: ncbiprotein

position:1729456:1
position: 1729456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1729456-1729525:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1733088-1733240:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1734316-1734409:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1734944-1734991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1738882-1738966:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1739726-1739809:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1740036-1740058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1741130-1741202:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1742237-1742338:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1742740-1742858:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1743616-1743701:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1743981-1744101:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1744407-1744575:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1745019-1745141:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1746047-1746148:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1746883-1747070:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1747365-1747565:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1748010-1748129:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1748449-1748629:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1748928-1749005:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1749450-1749553:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1749796-1749892:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1749999-1750068:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1750814-1750971:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1751456-1751552:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1751958-1752182:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1752858-1753006:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1754660-1754774:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1754930-1755091:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1755398-1755486:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1756378-1756565:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1756917-1756962:1:exon

ZHX3
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: ZHX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1757990..1805011)
location: region:1757990-1805011:-1
so has part: feature:1757990-1805011:-1:exon
subclass of: SO_0000010

115615086
type: Gene
SIO_000068: ncbigene

position:1757990:-1
position: 1757990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1805011:-1
position: 1805011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1757990-1805011:-1:exon

ZHX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: ZHX3
product: zinc fingers and homeoboxes 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 140 long SRA reads, 14 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030502788.1
SIO_010081: ZHX3
subclass of: SO_0000673
so part of: ZHX3
location: complement(join(1757990..1763569,1764958..1767869,1788874..1788979,1804838..1805011))
location: region:1757990-1805011:-1
so has part: feature:1804838-1805011:-1:exon
so has part: feature:1788874-1788979:-1:exon
so has part: feature:1764958-1767869:-1:exon
so has part: feature:1757990-1763569:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1804838-1805011:-1:exon

position:1804838:-1
position: 1804838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1788874-1788979:-1:exon

position:1788874:-1
position: 1788874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1788979:-1
position: 1788979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1764958-1767869:-1:exon

position:1764958:-1
position: 1764958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1767869:-1
position: 1767869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1757990-1763569:-1:exon

position:1763569:-1
position: 1763569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZHX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: ZHX3
product: zinc fingers and homeoboxes 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 133 long SRA reads, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030502795.2
SIO_010081: ZHX3
subclass of: SO_0000673
so part of: ZHX3
location: complement(join(1757990..1763569,1765320..1767869,1788874..1788979,1804838..1805001))
location: region:1757990-1805001:-1
so has part: feature:1804838-1805001:-1:exon
so has part: feature:1788874-1788979:-1:exon
so has part: feature:1765320-1767869:-1:exon
so has part: feature:1757990-1763569:-1:exon

position:1805001:-1
position: 1805001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1804838-1805001:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1788874-1788979:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1765320-1767869:-1:exon

position:1765320:-1
position: 1765320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1757990-1763569:-1:exon

ZHX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: ZHX3
product: zinc fingers and homeoboxes 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 134 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030502792.1
SIO_010081: ZHX3
subclass of: SO_0000673
so part of: ZHX3
location: complement(join(1757990..1763569,1764958..1767869,1804838..1804869))
location: region:1757990-1804869:-1
so has part: feature:1804838-1804869:-1:exon
so has part: feature:1764958-1767869:-1:exon
so has part: feature:1757990-1763569:-1:exon

position:1804869:-1
position: 1804869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1804838-1804869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1764958-1767869:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1757990-1763569:-1:exon

ZHX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: ZHX3
product: zinc fingers and homeoboxes 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 135 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030502790.1
SIO_010081: ZHX3
subclass of: SO_0000673
so part of: ZHX3
location: complement(join(1757990..1763569,1764958..1767869,1788874..1788979,1792325..1792373))
location: region:1757990-1792373:-1
so has part: feature:1792325-1792373:-1:exon
so has part: feature:1788874-1788979:-1:exon
so has part: feature:1764958-1767869:-1:exon
so has part: feature:1757990-1763569:-1:exon

position:1792373:-1
position: 1792373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1792325-1792373:-1:exon

position:1792325:-1
position: 1792325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1788874-1788979:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1764958-1767869:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1757990-1763569:-1:exon

ZHX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: ZHX3
product: zinc fingers and homeoboxes 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 135 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030502789.1
SIO_010081: ZHX3
subclass of: SO_0000673
so part of: ZHX3
location: complement(join(1757990..1763569,1764958..1767869,1788874..1788979,1789267..1789914))
location: region:1757990-1789914:-1
so has part: feature:1789267-1789914:-1:exon
so has part: feature:1788874-1788979:-1:exon
so has part: feature:1764958-1767869:-1:exon
so has part: feature:1757990-1763569:-1:exon

position:1789914:-1
position: 1789914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1789267-1789914:-1:exon

position:1789267:-1
position: 1789267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1788874-1788979:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1764958-1767869:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1757990-1763569:-1:exon

ZHX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: ZHX3
product: zinc fingers and homeoboxes 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 134 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030502794.1
SIO_010081: ZHX3
subclass of: SO_0000673
so part of: ZHX3
location: complement(join(1757990..1763569,1764958..1767869,1772861..1772887))
location: region:1757990-1772887:-1
so has part: feature:1772861-1772887:-1:exon
so has part: feature:1764958-1767869:-1:exon
so has part: feature:1757990-1763569:-1:exon

position:1772887:-1
position: 1772887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1772861-1772887:-1:exon

position:1772861:-1
position: 1772861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1764958-1767869:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1757990-1763569:-1:exon

ZHX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: ZHX3
product: zinc fingers and homeoboxes 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 134 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030502791.1
SIO_010081: ZHX3
subclass of: SO_0000673
so part of: ZHX3
location: complement(join(1757990..1763569,1764958..1767869,1771943..1772498))
location: region:1757990-1772498:-1
so has part: feature:1771943-1772498:-1:exon
so has part: feature:1764958-1767869:-1:exon
so has part: feature:1757990-1763569:-1:exon

position:1772498:-1
position: 1772498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1771943-1772498:-1:exon

position:1771943:-1
position: 1771943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1764958-1767869:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1757990-1763569:-1:exon

ZHX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: ZHX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc fingers and homeoboxes protein 3 isoform X1
translation: MASKRKSTTPCMIPVKTLVLQETELDAVEDDREGTQQDAPAEGPAAGDAGASNTNNGALSNGHRGIAESDTYICKSCDFGSQDIQHFFGHLDSEHLDFSKDPAFACIMCNFLANSHEGLSHHNTESHASETSFVWRVAKQDNRTTVEQSLCEATSSHDLPGEVPEEGVDGQSEIIITKTPIMKIMKGKPEAKKIHTLKENVSSQLGSEAEVKDGEHSFPNGSVPVSQPAASSTKSSHVVNGSIIGNVPVLQAGVAQLVSLQQQPPLHQQLPTSKSLPKVMIPLSSIPTYNATMDSNSFLKNSFHKFPYPTKAELCYLTVVTKYPEEQLKIWFTAQRLKQGISWSPEEIEDARKKMFNTVIQSVPQPTITVLNTPLVANPGSVPHLIQATLPGHVVGQPEGTGGLLVTQPIMANGLKGTSSSFTLAVTSVPKPQPAAQHSTVSSSSASGVKVVNSAQPLLTACPAISSQTFLDPNVYKNKKSHEQLSALKGSFCRNQFPGQAEVERLAKLTGLSTKEIRKWFSDRRYHYRNVRGGRAVCPGDSALDALPEVSFDVPPRGAELSPAAAPPHPPRRQSWHQAPDFTPTKYKERAPEQLKALESSFAQNPLPAEEEVNRLRGETKMTRREIDSWFSERRKKKKVAEENKKVEEAAQQEEEEAENGGGEGEDSSDELQAAGENGSVDASGNISVERKVSPIKINLKNLRVTESNGKAELVGAGATEKGDGGCSRAPSPPKPKLNFKKTAQQRHLLKQMFVQTQRPTNQEYDAIVSQTGLPRAEVIRWFGDSRYGYKNGQLKWYENYRRGVFPPGMAELSPAARDVLEEYYEQHKALREEDVPGLAERAHLGAQQLRLWFAVKAEEESRAAGAEEPAAGKGGRKAPSEASSEVPESSESWEPGGREGSAGTPDAPGPPPATRLEAD
SIO_010081: ZHX3
subclass of: SO_0000673
so part of: ZHX3
location: complement(join(1763559..1763569,1764958..1767709))
location: region:1763559-1767709:-1
so has part: feature:1764958-1767709:-1:exon
so has part: feature:1763559-1763569:-1:exon

XP_030358648.1
type: Protein
SIO_000068: ncbiprotein

position:1763559:-1
position: 1763559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1767709:-1
position: 1767709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1764958-1767709:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1763559-1763569:-1:exon

ZHX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: ZHX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc fingers and homeoboxes protein 3 isoform X1
translation: MASKRKSTTPCMIPVKTLVLQETELDAVEDDREGTQQDAPAEGPAAGDAGASNTNNGALSNGHRGIAESDTYICKSCDFGSQDIQHFFGHLDSEHLDFSKDPAFACIMCNFLANSHEGLSHHNTESHASETSFVWRVAKQDNRTTVEQSLCEATSSHDLPGEVPEEGVDGQSEIIITKTPIMKIMKGKPEAKKIHTLKENVSSQLGSEAEVKDGEHSFPNGSVPVSQPAASSTKSSHVVNGSIIGNVPVLQAGVAQLVSLQQQPPLHQQLPTSKSLPKVMIPLSSIPTYNATMDSNSFLKNSFHKFPYPTKAELCYLTVVTKYPEEQLKIWFTAQRLKQGISWSPEEIEDARKKMFNTVIQSVPQPTITVLNTPLVANPGSVPHLIQATLPGHVVGQPEGTGGLLVTQPIMANGLKGTSSSFTLAVTSVPKPQPAAQHSTVSSSSASGVKVVNSAQPLLTACPAISSQTFLDPNVYKNKKSHEQLSALKGSFCRNQFPGQAEVERLAKLTGLSTKEIRKWFSDRRYHYRNVRGGRAVCPGDSALDALPEVSFDVPPRGAELSPAAAPPHPPRRQSWHQAPDFTPTKYKERAPEQLKALESSFAQNPLPAEEEVNRLRGETKMTRREIDSWFSERRKKKKVAEENKKVEEAAQQEEEEAENGGGEGEDSSDELQAAGENGSVDASGNISVERKVSPIKINLKNLRVTESNGKAELVGAGATEKGDGGCSRAPSPPKPKLNFKKTAQQRHLLKQMFVQTQRPTNQEYDAIVSQTGLPRAEVIRWFGDSRYGYKNGQLKWYENYRRGVFPPGMAELSPAARDVLEEYYEQHKALREEDVPGLAERAHLGAQQLRLWFAVKAEEESRAAGAEEPAAGKGGRKAPSEASSEVPESSESWEPGGREGSAGTPDAPGPPPATRLEAD
SIO_010081: ZHX3
subclass of: SO_0000673
so part of: ZHX3
location: complement(join(1763559..1763569,1764958..1767709))
location: region:1763559-1767709:-1
so has part: feature:1764958-1767709:-1:exon
so has part: feature:1763559-1763569:-1:exon

XP_030358649.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1764958-1767709:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1763559-1763569:-1:exon

ZHX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: ZHX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc fingers and homeoboxes protein 3 isoform X1
translation: MASKRKSTTPCMIPVKTLVLQETELDAVEDDREGTQQDAPAEGPAAGDAGASNTNNGALSNGHRGIAESDTYICKSCDFGSQDIQHFFGHLDSEHLDFSKDPAFACIMCNFLANSHEGLSHHNTESHASETSFVWRVAKQDNRTTVEQSLCEATSSHDLPGEVPEEGVDGQSEIIITKTPIMKIMKGKPEAKKIHTLKENVSSQLGSEAEVKDGEHSFPNGSVPVSQPAASSTKSSHVVNGSIIGNVPVLQAGVAQLVSLQQQPPLHQQLPTSKSLPKVMIPLSSIPTYNATMDSNSFLKNSFHKFPYPTKAELCYLTVVTKYPEEQLKIWFTAQRLKQGISWSPEEIEDARKKMFNTVIQSVPQPTITVLNTPLVANPGSVPHLIQATLPGHVVGQPEGTGGLLVTQPIMANGLKGTSSSFTLAVTSVPKPQPAAQHSTVSSSSASGVKVVNSAQPLLTACPAISSQTFLDPNVYKNKKSHEQLSALKGSFCRNQFPGQAEVERLAKLTGLSTKEIRKWFSDRRYHYRNVRGGRAVCPGDSALDALPEVSFDVPPRGAELSPAAAPPHPPRRQSWHQAPDFTPTKYKERAPEQLKALESSFAQNPLPAEEEVNRLRGETKMTRREIDSWFSERRKKKKVAEENKKVEEAAQQEEEEAENGGGEGEDSSDELQAAGENGSVDASGNISVERKVSPIKINLKNLRVTESNGKAELVGAGATEKGDGGCSRAPSPPKPKLNFKKTAQQRHLLKQMFVQTQRPTNQEYDAIVSQTGLPRAEVIRWFGDSRYGYKNGQLKWYENYRRGVFPPGMAELSPAARDVLEEYYEQHKALREEDVPGLAERAHLGAQQLRLWFAVKAEEESRAAGAEEPAAGKGGRKAPSEASSEVPESSESWEPGGREGSAGTPDAPGPPPATRLEAD
SIO_010081: ZHX3
subclass of: SO_0000673
so part of: ZHX3
location: complement(join(1763559..1763569,1764958..1767709))
location: region:1763559-1767709:-1
so has part: feature:1764958-1767709:-1:exon
so has part: feature:1763559-1763569:-1:exon

XP_030358650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1764958-1767709:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1763559-1763569:-1:exon

ZHX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: ZHX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc fingers and homeoboxes protein 3 isoform X1
translation: MASKRKSTTPCMIPVKTLVLQETELDAVEDDREGTQQDAPAEGPAAGDAGASNTNNGALSNGHRGIAESDTYICKSCDFGSQDIQHFFGHLDSEHLDFSKDPAFACIMCNFLANSHEGLSHHNTESHASETSFVWRVAKQDNRTTVEQSLCEATSSHDLPGEVPEEGVDGQSEIIITKTPIMKIMKGKPEAKKIHTLKENVSSQLGSEAEVKDGEHSFPNGSVPVSQPAASSTKSSHVVNGSIIGNVPVLQAGVAQLVSLQQQPPLHQQLPTSKSLPKVMIPLSSIPTYNATMDSNSFLKNSFHKFPYPTKAELCYLTVVTKYPEEQLKIWFTAQRLKQGISWSPEEIEDARKKMFNTVIQSVPQPTITVLNTPLVANPGSVPHLIQATLPGHVVGQPEGTGGLLVTQPIMANGLKGTSSSFTLAVTSVPKPQPAAQHSTVSSSSASGVKVVNSAQPLLTACPAISSQTFLDPNVYKNKKSHEQLSALKGSFCRNQFPGQAEVERLAKLTGLSTKEIRKWFSDRRYHYRNVRGGRAVCPGDSALDALPEVSFDVPPRGAELSPAAAPPHPPRRQSWHQAPDFTPTKYKERAPEQLKALESSFAQNPLPAEEEVNRLRGETKMTRREIDSWFSERRKKKKVAEENKKVEEAAQQEEEEAENGGGEGEDSSDELQAAGENGSVDASGNISVERKVSPIKINLKNLRVTESNGKAELVGAGATEKGDGGCSRAPSPPKPKLNFKKTAQQRHLLKQMFVQTQRPTNQEYDAIVSQTGLPRAEVIRWFGDSRYGYKNGQLKWYENYRRGVFPPGMAELSPAARDVLEEYYEQHKALREEDVPGLAERAHLGAQQLRLWFAVKAEEESRAAGAEEPAAGKGGRKAPSEASSEVPESSESWEPGGREGSAGTPDAPGPPPATRLEAD
SIO_010081: ZHX3
subclass of: SO_0000673
so part of: ZHX3
location: complement(join(1763559..1763569,1764958..1767709))
location: region:1763559-1767709:-1
so has part: feature:1764958-1767709:-1:exon
so has part: feature:1763559-1763569:-1:exon

XP_030358651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1764958-1767709:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1763559-1763569:-1:exon

ZHX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: ZHX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc fingers and homeoboxes protein 3 isoform X1
translation: MASKRKSTTPCMIPVKTLVLQETELDAVEDDREGTQQDAPAEGPAAGDAGASNTNNGALSNGHRGIAESDTYICKSCDFGSQDIQHFFGHLDSEHLDFSKDPAFACIMCNFLANSHEGLSHHNTESHASETSFVWRVAKQDNRTTVEQSLCEATSSHDLPGEVPEEGVDGQSEIIITKTPIMKIMKGKPEAKKIHTLKENVSSQLGSEAEVKDGEHSFPNGSVPVSQPAASSTKSSHVVNGSIIGNVPVLQAGVAQLVSLQQQPPLHQQLPTSKSLPKVMIPLSSIPTYNATMDSNSFLKNSFHKFPYPTKAELCYLTVVTKYPEEQLKIWFTAQRLKQGISWSPEEIEDARKKMFNTVIQSVPQPTITVLNTPLVANPGSVPHLIQATLPGHVVGQPEGTGGLLVTQPIMANGLKGTSSSFTLAVTSVPKPQPAAQHSTVSSSSASGVKVVNSAQPLLTACPAISSQTFLDPNVYKNKKSHEQLSALKGSFCRNQFPGQAEVERLAKLTGLSTKEIRKWFSDRRYHYRNVRGGRAVCPGDSALDALPEVSFDVPPRGAELSPAAAPPHPPRRQSWHQAPDFTPTKYKERAPEQLKALESSFAQNPLPAEEEVNRLRGETKMTRREIDSWFSERRKKKKVAEENKKVEEAAQQEEEEAENGGGEGEDSSDELQAAGENGSVDASGNISVERKVSPIKINLKNLRVTESNGKAELVGAGATEKGDGGCSRAPSPPKPKLNFKKTAQQRHLLKQMFVQTQRPTNQEYDAIVSQTGLPRAEVIRWFGDSRYGYKNGQLKWYENYRRGVFPPGMAELSPAARDVLEEYYEQHKALREEDVPGLAERAHLGAQQLRLWFAVKAEEESRAAGAEEPAAGKGGRKAPSEASSEVPESSESWEPGGREGSAGTPDAPGPPPATRLEAD
SIO_010081: ZHX3
subclass of: SO_0000673
so part of: ZHX3
location: complement(join(1763559..1763569,1764958..1767709))
location: region:1763559-1767709:-1
so has part: feature:1764958-1767709:-1:exon
so has part: feature:1763559-1763569:-1:exon

XP_030358652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1764958-1767709:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1763559-1763569:-1:exon

ZHX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: ZHX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc fingers and homeoboxes protein 3 isoform X1
translation: MASKRKSTTPCMIPVKTLVLQETELDAVEDDREGTQQDAPAEGPAAGDAGASNTNNGALSNGHRGIAESDTYICKSCDFGSQDIQHFFGHLDSEHLDFSKDPAFACIMCNFLANSHEGLSHHNTESHASETSFVWRVAKQDNRTTVEQSLCEATSSHDLPGEVPEEGVDGQSEIIITKTPIMKIMKGKPEAKKIHTLKENVSSQLGSEAEVKDGEHSFPNGSVPVSQPAASSTKSSHVVNGSIIGNVPVLQAGVAQLVSLQQQPPLHQQLPTSKSLPKVMIPLSSIPTYNATMDSNSFLKNSFHKFPYPTKAELCYLTVVTKYPEEQLKIWFTAQRLKQGISWSPEEIEDARKKMFNTVIQSVPQPTITVLNTPLVANPGSVPHLIQATLPGHVVGQPEGTGGLLVTQPIMANGLKGTSSSFTLAVTSVPKPQPAAQHSTVSSSSASGVKVVNSAQPLLTACPAISSQTFLDPNVYKNKKSHEQLSALKGSFCRNQFPGQAEVERLAKLTGLSTKEIRKWFSDRRYHYRNVRGGRAVCPGDSALDALPEVSFDVPPRGAELSPAAAPPHPPRRQSWHQAPDFTPTKYKERAPEQLKALESSFAQNPLPAEEEVNRLRGETKMTRREIDSWFSERRKKKKVAEENKKVEEAAQQEEEEAENGGGEGEDSSDELQAAGENGSVDASGNISVERKVSPIKINLKNLRVTESNGKAELVGAGATEKGDGGCSRAPSPPKPKLNFKKTAQQRHLLKQMFVQTQRPTNQEYDAIVSQTGLPRAEVIRWFGDSRYGYKNGQLKWYENYRRGVFPPGMAELSPAARDVLEEYYEQHKALREEDVPGLAERAHLGAQQLRLWFAVKAEEESRAAGAEEPAAGKGGRKAPSEASSEVPESSESWEPGGREGSAGTPDAPGPPPATRLEAD
SIO_010081: ZHX3
subclass of: SO_0000673
so part of: ZHX3
location: complement(join(1763559..1763569,1764958..1767709))
location: region:1763559-1767709:-1
so has part: feature:1764958-1767709:-1:exon
so has part: feature:1763559-1763569:-1:exon

XP_030358654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1764958-1767709:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1763559-1763569:-1:exon

ZHX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: ZHX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc fingers and homeoboxes protein 3 isoform X2
translation: MASKRKSTTPCMIPVKTLVLQETELDAVEDDREGTQQDAPAEGPAAGDAGASNTNNGALSNGHRGIAESDTYICKSCDFGSQDIQHFFGHLDSEHLDFSKDPAFACIMCNFLANSHEGLSHHNTESHASETSFVWRVAKQDNRTTVEQSLCEATSSHDLPGEVPEEGVDGQSEIIITKTPIMKIMKGKPEAKKIHTLKENVSSQLGSEAEVKDGEHSFPNGSVPVSQPAASSTKSSHVVNGSIIGNVPVLQAGVAQLVSLQQQPPLHQQLPTSKSLPKVMIPLSSIPTYNATMDSNSFLKNSFHKFPYPTKAELCYLTVVTKYPEEQLKIWFTAQRLKQGISWSPEEIEDARKKMFNTVIQSVPQPTITVLNTPLVANPGSVPHLIQATLPGHVVGQPEGTGGLLVTQPIMANGLKGTSSSFTLAVTSVPKPQPAAQHSTVSSSSASGVKVVNSAQPLLTACPAISSQTFLDPNVYKNKKSHEQLSALKGSFCRNQFPGQAEVERLAKLTGLSTKEIRKWFSDRRYHYRNVRGGRAVCPGDSALDALPEVSFDVPPRGAELSPAAAPPHPPRRQSWHQAPDFTPTKYKERAPEQLKALESSFAQNPLPAEEEVNRLRGETKMTRREIDSWFSERRKKKKVAEENKKVEEAAQQEEEEAENGGGEGEDSSDELQAAGENGSVDASGNISVERKVSPIKINLKNLRVTESNGKAELVGAGATEKGDGGCSRAPSPPKPKLNFKKTAQQRHLLKQMFVQTQRPTNQEYDAIVSQTGLPRAEVIRWFGDSRYGYKNGQLK
SIO_010081: ZHX3
subclass of: SO_0000673
so part of: ZHX3
location: complement(join(1763569,1765320..1767709))
location: region:1763569-1767709:-1
so has part: feature:1765320-1767709:-1:exon
so has part: feature:1763569-1763569:-1:exon

XP_030358655.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1765320-1767709:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1763569-1763569:-1:exon

LPIN3
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LPIN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1805315..1821164
location: region:1805315-1821164:1
so has part: feature:1805315-1821164:1:exon
subclass of: SO_0000010

115615087
type: Gene
SIO_000068: ncbigene

position:1805315:1
position: 1805315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1821164:1
position: 1821164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1805315-1821164:1:exon

LPIN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LPIN3
product: lipin 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 long SRA reads, 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030502797.1
SIO_010081: LPIN3
subclass of: SO_0000673
so part of: LPIN3
location: join(1805315..1805685,1810953..1811153,1811396..1811491,1812375..1812595,1812768..1812875,1813576..1813696,1813867..1814266,1815678..1815777,1815888..1816051,1816128..1816221,1816418..1816487,1816754..1816846,1817284..1817345,1817615..1817741,1817975..1818123,1818283..1818369,1818896..1819048,1819306..1819417,1819510..1819613,1819736..1820144)
location: region:1805315-1820144:1
so has part: feature:1805315-1805685:1:exon
so has part: feature:1810953-1811153:1:exon
so has part: feature:1811396-1811491:1:exon
so has part: feature:1812375-1812595:1:exon
so has part: feature:1812768-1812875:1:exon
so has part: feature:1813576-1813696:1:exon
so has part: feature:1813867-1814266:1:exon
so has part: feature:1815678-1815777:1:exon
so has part: feature:1815888-1816051:1:exon
so has part: feature:1816128-1816221:1:exon
so has part: feature:1816418-1816487:1:exon
so has part: feature:1816754-1816846:1:exon
so has part: feature:1817284-1817345:1:exon
so has part: feature:1817615-1817741:1:exon
so has part: feature:1817975-1818123:1:exon
so has part: feature:1818283-1818369:1:exon
so has part: feature:1818896-1819048:1:exon
so has part: feature:1819306-1819417:1:exon
so has part: feature:1819510-1819613:1:exon
so has part: feature:1819736-1820144:1:exon

position:1820144:1
position: 1820144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1805315-1805685:1:exon

position:1805685:1
position: 1805685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1810953-1811153:1:exon

position:1810953:1
position: 1810953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1811153:1
position: 1811153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1811396-1811491:1:exon

position:1811396:1
position: 1811396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1811491:1
position: 1811491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1812375-1812595:1:exon

position:1812375:1
position: 1812375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1812595:1
position: 1812595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1812768-1812875:1:exon

position:1812768:1
position: 1812768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1812875:1
position: 1812875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1813576-1813696:1:exon

position:1813576:1
position: 1813576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1813696:1
position: 1813696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1813867-1814266:1:exon

position:1813867:1
position: 1813867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1814266:1
position: 1814266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1815678-1815777:1:exon

position:1815678:1
position: 1815678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1815777:1
position: 1815777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1815888-1816051:1:exon

position:1815888:1
position: 1815888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1816051:1
position: 1816051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1816128-1816221:1:exon

position:1816128:1
position: 1816128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1816221:1
position: 1816221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1816418-1816487:1:exon

position:1816418:1
position: 1816418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1816487:1
position: 1816487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1816754-1816846:1:exon

position:1816754:1
position: 1816754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1816846:1
position: 1816846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1817284-1817345:1:exon

position:1817284:1
position: 1817284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1817345:1
position: 1817345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1817615-1817741:1:exon

position:1817615:1
position: 1817615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1817741:1
position: 1817741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1817975-1818123:1:exon

position:1817975:1
position: 1817975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1818123:1
position: 1818123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1818283-1818369:1:exon

position:1818283:1
position: 1818283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1818369:1
position: 1818369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1818896-1819048:1:exon

position:1818896:1
position: 1818896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1819048:1
position: 1819048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1819306-1819417:1:exon

position:1819306:1
position: 1819306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1819417:1
position: 1819417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1819510-1819613:1:exon

position:1819510:1
position: 1819510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1819613:1
position: 1819613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1819736-1820144:1:exon

position:1819736:1
position: 1819736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LPIN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LPIN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidate phosphatase LPIN3 isoform X2
translation: MVRLLRHCKDDVAYLKLYSTVPAGSAAGEGPQNISQTMNYMGQLAETVFVTVKELYRGLNPATLTGCIDVVVVRQPDNSFQCSPFHVRFGKLGVLRSREKVVDIEINGEPVDLHMKLGDNGEAFFVQESEENEGSIPSRLCTSPIPMEQSLEEDAQPPHGQEAALRKRRRRRRKPKRKEVSDTELEGCEETRCEMSMEEPCKLPAPSDSVYFSFADLPEEGTMSLQSPEVHPYSDGELASADSSLLSHPSSPRSDSELEIRPQESFALGTESHVQWTWGRLPQVNKSERVEPAKSTKTIATAETTISAALAPEDEATHLVASSEGVGGGPCPAGPQAIPCSSAVSVIEPASAPRDGNSFPRLQDVPSAARAESLLDTPLPPQEGGRSVVPEVQPGAALGQVNSEGPEPHVESQRRQGAIKRSPHVGPGDVYLPDLSSLAAEQAALRFPRSVLEQSSKPAAAPSSAVGAQLPPHVPADSPTAPELLPAAALSLCGGLGGSRHISHEKFMEHVVSYQQFAENPGLIDDPNLVILLNKKYYNWAVAAPMVLSLQAFQRNIPESTIDQLVKEKMPKKGSRWWFSWRRREFPSEEQQLRPGKANVGMLQPGSTQQRQEEGSSSDEEPLHPGDMLAMDAPEQKSLPTYKKSLRLSSEQIGRLNLQDGPNEVAFSVTTQYQGTCRCEATIYLWNWDDKVVISDIDGTITKSDALGHILPHLGKDWTHHGIAKLFHKIHLNGYKFLYCSARAIGMAHITKGYLKWVNEQGCALPKGPILLAPSSLFSAFHREVIEKKPEVFKVACLKDIQNLFATKLPFYAAFGNRANDVYAYKQVGLPESRIFTVNPKGELIQELTKNHKSTYERLSELVELIFPPLGQSGSVALVCPEYSHFAYWRPPLPAVDLDAFS
SIO_010081: LPIN3
subclass of: SO_0000673
so part of: LPIN3
location: join(1805584..1805685,1810953..1811153,1811396..1811491,1812375..1812595,1812768..1812875,1813576..1813696,1813867..1814266,1815678..1815777,1815888..1816051,1816128..1816221,1816418..1816487,1816754..1816846,1817284..1817345,1817615..1817741,1817975..1818123,1818283..1818369,1818896..1819048,1819306..1819417,1819510..1819613,1819736..1819880)
location: region:1805584-1819880:1
so has part: feature:1805584-1805685:1:exon
so has part: feature:1810953-1811153:1:exon
so has part: feature:1811396-1811491:1:exon
so has part: feature:1812375-1812595:1:exon
so has part: feature:1812768-1812875:1:exon
so has part: feature:1813576-1813696:1:exon
so has part: feature:1813867-1814266:1:exon
so has part: feature:1815678-1815777:1:exon
so has part: feature:1815888-1816051:1:exon
so has part: feature:1816128-1816221:1:exon
so has part: feature:1816418-1816487:1:exon
so has part: feature:1816754-1816846:1:exon
so has part: feature:1817284-1817345:1:exon
so has part: feature:1817615-1817741:1:exon
so has part: feature:1817975-1818123:1:exon
so has part: feature:1818283-1818369:1:exon
so has part: feature:1818896-1819048:1:exon
so has part: feature:1819306-1819417:1:exon
so has part: feature:1819510-1819613:1:exon
so has part: feature:1819736-1819880:1:exon

XP_030358657.1
type: Protein
SIO_000068: ncbiprotein

position:1805584:1
position: 1805584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1819880:1
position: 1819880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1805584-1805685:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1810953-1811153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1811396-1811491:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1812375-1812595:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1812768-1812875:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1813576-1813696:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1813867-1814266:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1815678-1815777:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1815888-1816051:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1816128-1816221:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1816418-1816487:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1816754-1816846:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1817284-1817345:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1817615-1817741:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1817975-1818123:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1818283-1818369:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1818896-1819048:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1819306-1819417:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1819510-1819613:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1819736-1819880:1:exon

LPIN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LPIN3
product: lipin 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 long SRA reads, 33 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030502798.1
SIO_010081: LPIN3
subclass of: SO_0000673
so part of: LPIN3
location: join(1808585..1808721,1810953..1811153,1811396..1811491,1812375..1812595,1812768..1812875,1813576..1813696,1813867..1814266,1815681..1815777,1815888..1816051,1816128..1816221,1816418..1816487,1816754..1816846,1817284..1817345,1817615..1817741,1817975..1818123,1818283..1818369,1818896..1819048,1819306..1819417,1819510..1819613,1819736..1820144)
location: region:1808585-1820144:1
so has part: feature:1808585-1808721:1:exon
so has part: feature:1810953-1811153:1:exon
so has part: feature:1811396-1811491:1:exon
so has part: feature:1812375-1812595:1:exon
so has part: feature:1812768-1812875:1:exon
so has part: feature:1813576-1813696:1:exon
so has part: feature:1813867-1814266:1:exon
so has part: feature:1815681-1815777:1:exon
so has part: feature:1815888-1816051:1:exon
so has part: feature:1816128-1816221:1:exon
so has part: feature:1816418-1816487:1:exon
so has part: feature:1816754-1816846:1:exon
so has part: feature:1817284-1817345:1:exon
so has part: feature:1817615-1817741:1:exon
so has part: feature:1817975-1818123:1:exon
so has part: feature:1818283-1818369:1:exon
so has part: feature:1818896-1819048:1:exon
so has part: feature:1819306-1819417:1:exon
so has part: feature:1819510-1819613:1:exon
so has part: feature:1819736-1820144:1:exon

position:1808585:1
position: 1808585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1808585-1808721:1:exon

position:1808721:1
position: 1808721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1810953-1811153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1811396-1811491:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1812375-1812595:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1812768-1812875:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1813576-1813696:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1813867-1814266:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1815681-1815777:1:exon

position:1815681:1
position: 1815681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1815888-1816051:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1816128-1816221:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1816418-1816487:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1816754-1816846:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1817284-1817345:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1817615-1817741:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1817975-1818123:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1818283-1818369:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1818896-1819048:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1819306-1819417:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1819510-1819613:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1819736-1820144:1:exon

LPIN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LPIN3
product: lipin 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 34 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030502799.1
SIO_010081: LPIN3
subclass of: SO_0000673
so part of: LPIN3
location: join(1808613..1808721,1810953..1811153,1811396..1811491,1812375..1812595,1812768..1812875,1813576..1813696,1813867..1814266,1815678..1815777,1815888..1816051,1816128..1816221,1816418..1816487,1816754..1816846,1817287..1817345,1817615..1817741,1817975..1818123,1818283..1818369,1818896..1819048,1819306..1819417,1819510..1819613,1819736..1820089)
location: region:1808613-1820089:1
so has part: feature:1808613-1808721:1:exon
so has part: feature:1810953-1811153:1:exon
so has part: feature:1811396-1811491:1:exon
so has part: feature:1812375-1812595:1:exon
so has part: feature:1812768-1812875:1:exon
so has part: feature:1813576-1813696:1:exon
so has part: feature:1813867-1814266:1:exon
so has part: feature:1815678-1815777:1:exon
so has part: feature:1815888-1816051:1:exon
so has part: feature:1816128-1816221:1:exon
so has part: feature:1816418-1816487:1:exon
so has part: feature:1816754-1816846:1:exon
so has part: feature:1817287-1817345:1:exon
so has part: feature:1817615-1817741:1:exon
so has part: feature:1817975-1818123:1:exon
so has part: feature:1818283-1818369:1:exon
so has part: feature:1818896-1819048:1:exon
so has part: feature:1819306-1819417:1:exon
so has part: feature:1819510-1819613:1:exon
so has part: feature:1819736-1820089:1:exon

position:1808613:1
position: 1808613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1820089:1
position: 1820089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1808613-1808721:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1810953-1811153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1811396-1811491:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1812375-1812595:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1812768-1812875:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1813576-1813696:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1813867-1814266:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1815678-1815777:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1815888-1816051:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1816128-1816221:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1816418-1816487:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1816754-1816846:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1817287-1817345:1:exon

position:1817287:1
position: 1817287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1817615-1817741:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1817975-1818123:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1818283-1818369:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1818896-1819048:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1819306-1819417:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1819510-1819613:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1819736-1820089:1:exon

LPIN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LPIN3
product: lipin 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59 long SRA reads, 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030502796.1
SIO_010081: LPIN3
subclass of: SO_0000673
so part of: LPIN3
location: join(1808614..1808721,1810953..1811153,1811396..1811491,1812375..1812595,1812768..1812875,1813576..1813696,1813867..1814266,1815678..1815777,1815888..1816051,1816128..1816221,1816418..1816487,1816754..1816846,1817284..1817345,1817615..1817741,1817975..1818123,1818283..1818369,1818896..1819048,1819306..1819417,1819510..1819613,1819736..1821164)
location: region:1808614-1821164:1
so has part: feature:1808614-1808721:1:exon
so has part: feature:1810953-1811153:1:exon
so has part: feature:1811396-1811491:1:exon
so has part: feature:1812375-1812595:1:exon
so has part: feature:1812768-1812875:1:exon
so has part: feature:1813576-1813696:1:exon
so has part: feature:1813867-1814266:1:exon
so has part: feature:1815678-1815777:1:exon
so has part: feature:1815888-1816051:1:exon
so has part: feature:1816128-1816221:1:exon
so has part: feature:1816418-1816487:1:exon
so has part: feature:1816754-1816846:1:exon
so has part: feature:1817284-1817345:1:exon
so has part: feature:1817615-1817741:1:exon
so has part: feature:1817975-1818123:1:exon
so has part: feature:1818283-1818369:1:exon
so has part: feature:1818896-1819048:1:exon
so has part: feature:1819306-1819417:1:exon
so has part: feature:1819510-1819613:1:exon
so has part: feature:1819736-1821164:1:exon

position:1808614:1
position: 1808614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1808614-1808721:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1810953-1811153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1811396-1811491:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1812375-1812595:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1812768-1812875:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1813576-1813696:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1813867-1814266:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1815678-1815777:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1815888-1816051:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1816128-1816221:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1816418-1816487:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1816754-1816846:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1817284-1817345:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1817615-1817741:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1817975-1818123:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1818283-1818369:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1818896-1819048:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1819306-1819417:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1819510-1819613:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1819736-1821164:1:exon

LPIN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LPIN3
product: lipin 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030502800.1
SIO_010081: LPIN3
subclass of: SO_0000673
so part of: LPIN3
location: join(1808614..1808721,1810953..1811066,1811396..1811491,1812375..1812595,1812768..1812875,1813576..1813696,1813867..1814266,1815678..1815777,1815888..1816051,1816128..1816221,1816418..1816487,1816754..1816846,1817284..1817345,1817615..1817741,1817975..1818123,1818283..1818369,1818896..1819048,1819306..1819417,1819510..1819613,1819736..1820144)
location: region:1808614-1820144:1
so has part: feature:1808614-1808721:1:exon
so has part: feature:1810953-1811066:1:exon
so has part: feature:1811396-1811491:1:exon
so has part: feature:1812375-1812595:1:exon
so has part: feature:1812768-1812875:1:exon
so has part: feature:1813576-1813696:1:exon
so has part: feature:1813867-1814266:1:exon
so has part: feature:1815678-1815777:1:exon
so has part: feature:1815888-1816051:1:exon
so has part: feature:1816128-1816221:1:exon
so has part: feature:1816418-1816487:1:exon
so has part: feature:1816754-1816846:1:exon
so has part: feature:1817284-1817345:1:exon
so has part: feature:1817615-1817741:1:exon
so has part: feature:1817975-1818123:1:exon
so has part: feature:1818283-1818369:1:exon
so has part: feature:1818896-1819048:1:exon
so has part: feature:1819306-1819417:1:exon
so has part: feature:1819510-1819613:1:exon
so has part: feature:1819736-1820144:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1808614-1808721:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1810953-1811066:1:exon

position:1811066:1
position: 1811066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1811396-1811491:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1812375-1812595:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1812768-1812875:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1813576-1813696:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1813867-1814266:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1815678-1815777:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1815888-1816051:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1816128-1816221:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1816418-1816487:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1816754-1816846:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1817284-1817345:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1817615-1817741:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1817975-1818123:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1818283-1818369:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1818896-1819048:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1819306-1819417:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1819510-1819613:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1819736-1820144:1:exon

LPIN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LPIN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidate phosphatase LPIN3 isoform X1
translation: MGHKRWWERARLGAGSAPREAGLCSVRFGSPPLAQSQTMNYMGQLAETVFVTVKELYRGLNPATLTGCIDVVVVRQPDNSFQCSPFHVRFGKLGVLRSREKVVDIEINGEPVDLHMKLGDNGEAFFVQESEENEGSIPSRLCTSPIPMEQSLEEDAQPPHGQEAALRKRRRRRRKPKRKEVSDTELEGCEETRCEMSMEEPCKLPAPSDSVYFSFADLPEEGTMSLQSPEVHPYSDGELASADSSLLSHPSSPRSDSELEIRPQESFALGTESHVQWTWGRLPQVNKSERVEPAKSTKTIATAETTISAALAPEDEATHLVASSEGVGGGPCPAGPQAIPCSSAVSVIEPASAPRDGNSFPRLQDVPSAARAESLLDTPLPPQEGGRSVVPEVQPGAALGQVNSEGPEPHVESQRRQGAIKRSPHVGPGDVYLPDLSSLAAEQAALRFPRSVLEQSSKPAAAPSSAVGAQLPPHVPADSPTAPELLPAAALSLCGGLGGSRHISHEKFMEHVVSYQQFAENPGLIDDPNLVILLNKKYYNWAVAAPMVLSLQAFQRNIPESTIDQLVKEKMPKKGSRWWFSWRRREFPSEEQQLRPGKANVGMLQPGSTQQRQEEGSSSDEEPLHPGDMLAMDAPEQKSLPTYKKSLRLSSEQIGRLNLQDGPNEVAFSVTTQYQGTCRCEATIYLWNWDDKVVISDIDGTITKSDALGHILPHLGKDWTHHGIAKLFHKIHLNGYKFLYCSARAIGMAHITKGYLKWVNEQGCALPKGPILLAPSSLFSAFHREVIEKKPEVFKVACLKDIQNLFATKLPFYAAFGNRANDVYAYKQVGLPESRIFTVNPKGELIQELTKNHKSTYERLSELVELIFPPLGQSGSVALVCPEYSHFAYWRPPLPAVDLDAFS
SIO_010081: LPIN3
subclass of: SO_0000673
so part of: LPIN3
location: join(1808617..1808721,1810953..1811153,1811396..1811491,1812375..1812595,1812768..1812875,1813576..1813696,1813867..1814266,1815678..1815777,1815888..1816051,1816128..1816221,1816418..1816487,1816754..1816846,1817284..1817345,1817615..1817741,1817975..1818123,1818283..1818369,1818896..1819048,1819306..1819417,1819510..1819613,1819736..1819880)
location: region:1808617-1819880:1
so has part: feature:1808617-1808721:1:exon
so has part: feature:1810953-1811153:1:exon
so has part: feature:1811396-1811491:1:exon
so has part: feature:1812375-1812595:1:exon
so has part: feature:1812768-1812875:1:exon
so has part: feature:1813576-1813696:1:exon
so has part: feature:1813867-1814266:1:exon
so has part: feature:1815678-1815777:1:exon
so has part: feature:1815888-1816051:1:exon
so has part: feature:1816128-1816221:1:exon
so has part: feature:1816418-1816487:1:exon
so has part: feature:1816754-1816846:1:exon
so has part: feature:1817284-1817345:1:exon
so has part: feature:1817615-1817741:1:exon
so has part: feature:1817975-1818123:1:exon
so has part: feature:1818283-1818369:1:exon
so has part: feature:1818896-1819048:1:exon
so has part: feature:1819306-1819417:1:exon
so has part: feature:1819510-1819613:1:exon
so has part: feature:1819736-1819880:1:exon

XP_030358656.1
type: Protein
SIO_000068: ncbiprotein

position:1808617:1
position: 1808617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1808617-1808721:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1810953-1811153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1811396-1811491:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1812375-1812595:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1812768-1812875:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1813576-1813696:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1813867-1814266:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1815678-1815777:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1815888-1816051:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1816128-1816221:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1816418-1816487:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1816754-1816846:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1817284-1817345:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1817615-1817741:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1817975-1818123:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1818283-1818369:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1818896-1819048:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1819306-1819417:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1819510-1819613:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1819736-1819880:1:exon

LPIN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LPIN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidate phosphatase LPIN3 isoform X4
translation: MGHKRWWERARLGAGSAPREAGLCSVRFGSPPLAQSQTMNYMGQLAETVFVTVKELYRGLNPATLTGCIDVVVVRQPDNSFQCSPFHVRFGKLGVLRSREKVVDIEINGEPVDLHMKLGDNGEAFFVQESEENEGSIPSRLCTSPIPMEQSLEEDAQPPHGQEAALRKRRRRRRKPKRKEVSDTELEGCEETRCEMSMEEPCKLPAPSDSVYFSFADLPEEGTMSLQSPEVHPYSDGELASADSSLLSHPSSPRSDSELEIRPQESFALGTESHVQWTWGRLPQVNKSERVEPAKSTKTIATAETTISAALAPEDEATHLVASSEGVGGGPCPAGPQAIPCSSAVSVIEPASAPRDGNSFPRLQDVPSAARAESLLDTPLPPQEGGRSVVPEVQPGAALGQVNSEGPEPHVESQRRQGAIKRSPHVGPGDVYLPDLSSLAAEQAALRFPRSVLEQSSKPAAAPSSAVGAQLPPHVPADSPTAPELLPAAALSLCGGLGGSRHISHEKFMEHVVSYQQFAENPGLIDDPNLVILLNKKYYNWAVAAPMVLSLQAFQRNIPESTIDQLVKEKMPKKGSRWWFSWRRREFPSEEQLRPGKANVGMLQPGSTQQRQEEGSSSDEEPLHPGDMLAMDAPEQKSLPTYKKSLRLSSEQIGRLNLQDGPNEVAFSVTTQYQGTCRCEATIYLWNWDDKVVISDIDGTITKSDALGHILPHLGKDWTHHGIAKLFHKIHLNGYKFLYCSARAIGMAHITKGYLKWVNEQGCALPKGPILLAPSSLFSAFHREVIEKKPEVFKVACLKDIQNLFATKLPFYAAFGNRANDVYAYKQVGLPESRIFTVNPKGELIQELTKNHKSTYERLSELVELIFPPLGQSGSVALVCPEYSHFAYWRPPLPAVDLDAFS
SIO_010081: LPIN3
subclass of: SO_0000673
so part of: LPIN3
location: join(1808617..1808721,1810953..1811153,1811396..1811491,1812375..1812595,1812768..1812875,1813576..1813696,1813867..1814266,1815678..1815777,1815888..1816051,1816128..1816221,1816418..1816487,1816754..1816846,1817287..1817345,1817615..1817741,1817975..1818123,1818283..1818369,1818896..1819048,1819306..1819417,1819510..1819613,1819736..1819880)
location: region:1808617-1819880:1
so has part: feature:1808617-1808721:1:exon
so has part: feature:1810953-1811153:1:exon
so has part: feature:1811396-1811491:1:exon
so has part: feature:1812375-1812595:1:exon
so has part: feature:1812768-1812875:1:exon
so has part: feature:1813576-1813696:1:exon
so has part: feature:1813867-1814266:1:exon
so has part: feature:1815678-1815777:1:exon
so has part: feature:1815888-1816051:1:exon
so has part: feature:1816128-1816221:1:exon
so has part: feature:1816418-1816487:1:exon
so has part: feature:1816754-1816846:1:exon
so has part: feature:1817287-1817345:1:exon
so has part: feature:1817615-1817741:1:exon
so has part: feature:1817975-1818123:1:exon
so has part: feature:1818283-1818369:1:exon
so has part: feature:1818896-1819048:1:exon
so has part: feature:1819306-1819417:1:exon
so has part: feature:1819510-1819613:1:exon
so has part: feature:1819736-1819880:1:exon

XP_030358659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1808617-1808721:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1810953-1811153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1811396-1811491:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1812375-1812595:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1812768-1812875:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1813576-1813696:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1813867-1814266:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1815678-1815777:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1815888-1816051:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1816128-1816221:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1816418-1816487:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1816754-1816846:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1817287-1817345:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1817615-1817741:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1817975-1818123:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1818283-1818369:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1818896-1819048:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1819306-1819417:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1819510-1819613:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1819736-1819880:1:exon

LPIN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LPIN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidate phosphatase LPIN3 isoform X3
translation: MGHKRWWERARLGAGSAPREAGLCSVRFGSPPLAQSQTMNYMGQLAETVFVTVKELYRGLNPATLTGCIDVVVVRQPDNSFQCSPFHVRFGKLGVLRSREKVVDIEINGEPVDLHMKLGDNGEAFFVQESEENEGSIPSRLCTSPIPMEQSLEEDAQPPHGQEAALRKRRRRRRKPKRKEVSDTELEGCEETRCEMSMEEPCKLPAPSDSVYFSFADLPEEGTMSLQSPEVHPYSDGELASADSSLLSHPSSPRSDSELEIRPQESFALGTESHVQWTWGRLPQVNKSERVEPAKSTKTIATAETTISAALAPEDEATHLVASSEGVGGGPCPAGPQAIPCSSAVSVIEPASAPRDGNSFPRLQDVPSAARAESLLDTPLPPQEGGRSVVPEVQPGAALGQVNSEGPEPHVESQRRQAIKRSPHVGPGDVYLPDLSSLAAEQAALRFPRSVLEQSSKPAAAPSSAVGAQLPPHVPADSPTAPELLPAAALSLCGGLGGSRHISHEKFMEHVVSYQQFAENPGLIDDPNLVILLNKKYYNWAVAAPMVLSLQAFQRNIPESTIDQLVKEKMPKKGSRWWFSWRRREFPSEEQQLRPGKANVGMLQPGSTQQRQEEGSSSDEEPLHPGDMLAMDAPEQKSLPTYKKSLRLSSEQIGRLNLQDGPNEVAFSVTTQYQGTCRCEATIYLWNWDDKVVISDIDGTITKSDALGHILPHLGKDWTHHGIAKLFHKIHLNGYKFLYCSARAIGMAHITKGYLKWVNEQGCALPKGPILLAPSSLFSAFHREVIEKKPEVFKVACLKDIQNLFATKLPFYAAFGNRANDVYAYKQVGLPESRIFTVNPKGELIQELTKNHKSTYERLSELVELIFPPLGQSGSVALVCPEYSHFAYWRPPLPAVDLDAFS
SIO_010081: LPIN3
subclass of: SO_0000673
so part of: LPIN3
location: join(1808617..1808721,1810953..1811153,1811396..1811491,1812375..1812595,1812768..1812875,1813576..1813696,1813867..1814266,1815681..1815777,1815888..1816051,1816128..1816221,1816418..1816487,1816754..1816846,1817284..1817345,1817615..1817741,1817975..1818123,1818283..1818369,1818896..1819048,1819306..1819417,1819510..1819613,1819736..1819880)
location: region:1808617-1819880:1
so has part: feature:1808617-1808721:1:exon
so has part: feature:1810953-1811153:1:exon
so has part: feature:1811396-1811491:1:exon
so has part: feature:1812375-1812595:1:exon
so has part: feature:1812768-1812875:1:exon
so has part: feature:1813576-1813696:1:exon
so has part: feature:1813867-1814266:1:exon
so has part: feature:1815681-1815777:1:exon
so has part: feature:1815888-1816051:1:exon
so has part: feature:1816128-1816221:1:exon
so has part: feature:1816418-1816487:1:exon
so has part: feature:1816754-1816846:1:exon
so has part: feature:1817284-1817345:1:exon
so has part: feature:1817615-1817741:1:exon
so has part: feature:1817975-1818123:1:exon
so has part: feature:1818283-1818369:1:exon
so has part: feature:1818896-1819048:1:exon
so has part: feature:1819306-1819417:1:exon
so has part: feature:1819510-1819613:1:exon
so has part: feature:1819736-1819880:1:exon

XP_030358658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1808617-1808721:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1810953-1811153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1811396-1811491:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1812375-1812595:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1812768-1812875:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1813576-1813696:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1813867-1814266:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1815681-1815777:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1815888-1816051:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1816128-1816221:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1816418-1816487:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1816754-1816846:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1817284-1817345:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1817615-1817741:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1817975-1818123:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1818283-1818369:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1818896-1819048:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1819306-1819417:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1819510-1819613:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1819736-1819880:1:exon

LPIN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LPIN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidate phosphatase LPIN3 isoform X5
translation: MGHKRWWERARLGAGSAPREAGLCSVRFGSPPLAQSQTMNYMGQLAETVFVTVKELYRGLNPATLTGCIDVVVVDIEINGEPVDLHMKLGDNGEAFFVQESEENEGSIPSRLCTSPIPMEQSLEEDAQPPHGQEAALRKRRRRRRKPKRKEVSDTELEGCEETRCEMSMEEPCKLPAPSDSVYFSFADLPEEGTMSLQSPEVHPYSDGELASADSSLLSHPSSPRSDSELEIRPQESFALGTESHVQWTWGRLPQVNKSERVEPAKSTKTIATAETTISAALAPEDEATHLVASSEGVGGGPCPAGPQAIPCSSAVSVIEPASAPRDGNSFPRLQDVPSAARAESLLDTPLPPQEGGRSVVPEVQPGAALGQVNSEGPEPHVESQRRQGAIKRSPHVGPGDVYLPDLSSLAAEQAALRFPRSVLEQSSKPAAAPSSAVGAQLPPHVPADSPTAPELLPAAALSLCGGLGGSRHISHEKFMEHVVSYQQFAENPGLIDDPNLVILLNKKYYNWAVAAPMVLSLQAFQRNIPESTIDQLVKEKMPKKGSRWWFSWRRREFPSEEQQLRPGKANVGMLQPGSTQQRQEEGSSSDEEPLHPGDMLAMDAPEQKSLPTYKKSLRLSSEQIGRLNLQDGPNEVAFSVTTQYQGTCRCEATIYLWNWDDKVVISDIDGTITKSDALGHILPHLGKDWTHHGIAKLFHKIHLNGYKFLYCSARAIGMAHITKGYLKWVNEQGCALPKGPILLAPSSLFSAFHREVIEKKPEVFKVACLKDIQNLFATKLPFYAAFGNRANDVYAYKQVGLPESRIFTVNPKGELIQELTKNHKSTYERLSELVELIFPPLGQSGSVALVCPEYSHFAYWRPPLPAVDLDAFS
SIO_010081: LPIN3
subclass of: SO_0000673
so part of: LPIN3
location: join(1808617..1808721,1810953..1811066,1811396..1811491,1812375..1812595,1812768..1812875,1813576..1813696,1813867..1814266,1815678..1815777,1815888..1816051,1816128..1816221,1816418..1816487,1816754..1816846,1817284..1817345,1817615..1817741,1817975..1818123,1818283..1818369,1818896..1819048,1819306..1819417,1819510..1819613,1819736..1819880)
location: region:1808617-1819880:1
so has part: feature:1808617-1808721:1:exon
so has part: feature:1810953-1811066:1:exon
so has part: feature:1811396-1811491:1:exon
so has part: feature:1812375-1812595:1:exon
so has part: feature:1812768-1812875:1:exon
so has part: feature:1813576-1813696:1:exon
so has part: feature:1813867-1814266:1:exon
so has part: feature:1815678-1815777:1:exon
so has part: feature:1815888-1816051:1:exon
so has part: feature:1816128-1816221:1:exon
so has part: feature:1816418-1816487:1:exon
so has part: feature:1816754-1816846:1:exon
so has part: feature:1817284-1817345:1:exon
so has part: feature:1817615-1817741:1:exon
so has part: feature:1817975-1818123:1:exon
so has part: feature:1818283-1818369:1:exon
so has part: feature:1818896-1819048:1:exon
so has part: feature:1819306-1819417:1:exon
so has part: feature:1819510-1819613:1:exon
so has part: feature:1819736-1819880:1:exon

XP_030358660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1808617-1808721:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1810953-1811066:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1811396-1811491:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1812375-1812595:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1812768-1812875:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1813576-1813696:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1813867-1814266:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1815678-1815777:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1815888-1816051:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1816128-1816221:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1816418-1816487:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1816754-1816846:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1817284-1817345:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1817615-1817741:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1817975-1818123:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1818283-1818369:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1818896-1819048:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1819306-1819417:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1819510-1819613:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1819736-1819880:1:exon

LPIN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LPIN3
product: lipin 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 long SRA reads, 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030502802.1
SIO_010081: LPIN3
subclass of: SO_0000673
so part of: LPIN3
location: join(1808732..1808742,1810953..1811153,1811396..1811491,1812375..1812595,1812768..1812875,1813576..1813696,1813867..1814266,1815678..1815777,1815888..1816051,1816128..1816221,1816418..1816487,1816754..1816846,1817284..1817345,1817615..1817741,1817975..1818123,1818283..1818369,1818896..1819048,1819306..1819417,1819510..1819613,1819736..1820144)
location: region:1808732-1820144:1
so has part: feature:1808732-1808742:1:exon
so has part: feature:1810953-1811153:1:exon
so has part: feature:1811396-1811491:1:exon
so has part: feature:1812375-1812595:1:exon
so has part: feature:1812768-1812875:1:exon
so has part: feature:1813576-1813696:1:exon
so has part: feature:1813867-1814266:1:exon
so has part: feature:1815678-1815777:1:exon
so has part: feature:1815888-1816051:1:exon
so has part: feature:1816128-1816221:1:exon
so has part: feature:1816418-1816487:1:exon
so has part: feature:1816754-1816846:1:exon
so has part: feature:1817284-1817345:1:exon
so has part: feature:1817615-1817741:1:exon
so has part: feature:1817975-1818123:1:exon
so has part: feature:1818283-1818369:1:exon
so has part: feature:1818896-1819048:1:exon
so has part: feature:1819306-1819417:1:exon
so has part: feature:1819510-1819613:1:exon
so has part: feature:1819736-1820144:1:exon

position:1808732:1
position: 1808732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1808732-1808742:1:exon

position:1808742:1
position: 1808742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1810953-1811153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1811396-1811491:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1812375-1812595:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1812768-1812875:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1813576-1813696:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1813867-1814266:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1815678-1815777:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1815888-1816051:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1816128-1816221:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1816418-1816487:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1816754-1816846:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1817284-1817345:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1817615-1817741:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1817975-1818123:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1818283-1818369:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1818896-1819048:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1819306-1819417:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1819510-1819613:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1819736-1820144:1:exon

LPIN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LPIN3
product: lipin 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 long SRA reads, 33 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030502801.1
SIO_010081: LPIN3
subclass of: SO_0000673
so part of: LPIN3
location: join(1808764..1808853,1810953..1811153,1811396..1811491,1812375..1812595,1812768..1812875,1813576..1813696,1813867..1814266,1815678..1815777,1815888..1816051,1816128..1816221,1816418..1816487,1816754..1816846,1817284..1817345,1817615..1817741,1817975..1818123,1818283..1818369,1818896..1819048,1819306..1819417,1819510..1819613,1819736..1820144)
location: region:1808764-1820144:1
so has part: feature:1808764-1808853:1:exon
so has part: feature:1810953-1811153:1:exon
so has part: feature:1811396-1811491:1:exon
so has part: feature:1812375-1812595:1:exon
so has part: feature:1812768-1812875:1:exon
so has part: feature:1813576-1813696:1:exon
so has part: feature:1813867-1814266:1:exon
so has part: feature:1815678-1815777:1:exon
so has part: feature:1815888-1816051:1:exon
so has part: feature:1816128-1816221:1:exon
so has part: feature:1816418-1816487:1:exon
so has part: feature:1816754-1816846:1:exon
so has part: feature:1817284-1817345:1:exon
so has part: feature:1817615-1817741:1:exon
so has part: feature:1817975-1818123:1:exon
so has part: feature:1818283-1818369:1:exon
so has part: feature:1818896-1819048:1:exon
so has part: feature:1819306-1819417:1:exon
so has part: feature:1819510-1819613:1:exon
so has part: feature:1819736-1820144:1:exon

position:1808764:1
position: 1808764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1808764-1808853:1:exon

position:1808853:1
position: 1808853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1810953-1811153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1811396-1811491:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1812375-1812595:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1812768-1812875:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1813576-1813696:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1813867-1814266:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1815678-1815777:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1815888-1816051:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1816128-1816221:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1816418-1816487:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1816754-1816846:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1817284-1817345:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1817615-1817741:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1817975-1818123:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1818283-1818369:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1818896-1819048:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1819306-1819417:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1819510-1819613:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1819736-1820144:1:exon

LPIN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LPIN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidate phosphatase LPIN3 isoform X6
translation: MNYMGQLAETVFVTVKELYRGLNPATLTGCIDVVVVRQPDNSFQCSPFHVRFGKLGVLRSREKVVDIEINGEPVDLHMKLGDNGEAFFVQESEENEGSIPSRLCTSPIPMEQSLEEDAQPPHGQEAALRKRRRRRRKPKRKEVSDTELEGCEETRCEMSMEEPCKLPAPSDSVYFSFADLPEEGTMSLQSPEVHPYSDGELASADSSLLSHPSSPRSDSELEIRPQESFALGTESHVQWTWGRLPQVNKSERVEPAKSTKTIATAETTISAALAPEDEATHLVASSEGVGGGPCPAGPQAIPCSSAVSVIEPASAPRDGNSFPRLQDVPSAARAESLLDTPLPPQEGGRSVVPEVQPGAALGQVNSEGPEPHVESQRRQGAIKRSPHVGPGDVYLPDLSSLAAEQAALRFPRSVLEQSSKPAAAPSSAVGAQLPPHVPADSPTAPELLPAAALSLCGGLGGSRHISHEKFMEHVVSYQQFAENPGLIDDPNLVILLNKKYYNWAVAAPMVLSLQAFQRNIPESTIDQLVKEKMPKKGSRWWFSWRRREFPSEEQQLRPGKANVGMLQPGSTQQRQEEGSSSDEEPLHPGDMLAMDAPEQKSLPTYKKSLRLSSEQIGRLNLQDGPNEVAFSVTTQYQGTCRCEATIYLWNWDDKVVISDIDGTITKSDALGHILPHLGKDWTHHGIAKLFHKIHLNGYKFLYCSARAIGMAHITKGYLKWVNEQGCALPKGPILLAPSSLFSAFHREVIEKKPEVFKVACLKDIQNLFATKLPFYAAFGNRANDVYAYKQVGLPESRIFTVNPKGELIQELTKNHKSTYERLSELVELIFPPLGQSGSVALVCPEYSHFAYWRPPLPAVDLDAFS
SIO_010081: LPIN3
subclass of: SO_0000673
so part of: LPIN3
location: join(1810962..1811153,1811396..1811491,1812375..1812595,1812768..1812875,1813576..1813696,1813867..1814266,1815678..1815777,1815888..1816051,1816128..1816221,1816418..1816487,1816754..1816846,1817284..1817345,1817615..1817741,1817975..1818123,1818283..1818369,1818896..1819048,1819306..1819417,1819510..1819613,1819736..1819880)
location: region:1810962-1819880:1
so has part: feature:1810962-1811153:1:exon
so has part: feature:1811396-1811491:1:exon
so has part: feature:1812375-1812595:1:exon
so has part: feature:1812768-1812875:1:exon
so has part: feature:1813576-1813696:1:exon
so has part: feature:1813867-1814266:1:exon
so has part: feature:1815678-1815777:1:exon
so has part: feature:1815888-1816051:1:exon
so has part: feature:1816128-1816221:1:exon
so has part: feature:1816418-1816487:1:exon
so has part: feature:1816754-1816846:1:exon
so has part: feature:1817284-1817345:1:exon
so has part: feature:1817615-1817741:1:exon
so has part: feature:1817975-1818123:1:exon
so has part: feature:1818283-1818369:1:exon
so has part: feature:1818896-1819048:1:exon
so has part: feature:1819306-1819417:1:exon
so has part: feature:1819510-1819613:1:exon
so has part: feature:1819736-1819880:1:exon

XP_030358661.1
type: Protein
SIO_000068: ncbiprotein

position:1810962:1
position: 1810962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1810962-1811153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1811396-1811491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1812375-1812595:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1812768-1812875:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1813576-1813696:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1813867-1814266:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1815678-1815777:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1815888-1816051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1816128-1816221:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1816418-1816487:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1816754-1816846:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1817284-1817345:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1817615-1817741:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1817975-1818123:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1818283-1818369:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1818896-1819048:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1819306-1819417:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1819510-1819613:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1819736-1819880:1:exon

LPIN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LPIN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidate phosphatase LPIN3 isoform X6
translation: MNYMGQLAETVFVTVKELYRGLNPATLTGCIDVVVVRQPDNSFQCSPFHVRFGKLGVLRSREKVVDIEINGEPVDLHMKLGDNGEAFFVQESEENEGSIPSRLCTSPIPMEQSLEEDAQPPHGQEAALRKRRRRRRKPKRKEVSDTELEGCEETRCEMSMEEPCKLPAPSDSVYFSFADLPEEGTMSLQSPEVHPYSDGELASADSSLLSHPSSPRSDSELEIRPQESFALGTESHVQWTWGRLPQVNKSERVEPAKSTKTIATAETTISAALAPEDEATHLVASSEGVGGGPCPAGPQAIPCSSAVSVIEPASAPRDGNSFPRLQDVPSAARAESLLDTPLPPQEGGRSVVPEVQPGAALGQVNSEGPEPHVESQRRQGAIKRSPHVGPGDVYLPDLSSLAAEQAALRFPRSVLEQSSKPAAAPSSAVGAQLPPHVPADSPTAPELLPAAALSLCGGLGGSRHISHEKFMEHVVSYQQFAENPGLIDDPNLVILLNKKYYNWAVAAPMVLSLQAFQRNIPESTIDQLVKEKMPKKGSRWWFSWRRREFPSEEQQLRPGKANVGMLQPGSTQQRQEEGSSSDEEPLHPGDMLAMDAPEQKSLPTYKKSLRLSSEQIGRLNLQDGPNEVAFSVTTQYQGTCRCEATIYLWNWDDKVVISDIDGTITKSDALGHILPHLGKDWTHHGIAKLFHKIHLNGYKFLYCSARAIGMAHITKGYLKWVNEQGCALPKGPILLAPSSLFSAFHREVIEKKPEVFKVACLKDIQNLFATKLPFYAAFGNRANDVYAYKQVGLPESRIFTVNPKGELIQELTKNHKSTYERLSELVELIFPPLGQSGSVALVCPEYSHFAYWRPPLPAVDLDAFS
SIO_010081: LPIN3
subclass of: SO_0000673
so part of: LPIN3
location: join(1810962..1811153,1811396..1811491,1812375..1812595,1812768..1812875,1813576..1813696,1813867..1814266,1815678..1815777,1815888..1816051,1816128..1816221,1816418..1816487,1816754..1816846,1817284..1817345,1817615..1817741,1817975..1818123,1818283..1818369,1818896..1819048,1819306..1819417,1819510..1819613,1819736..1819880)
location: region:1810962-1819880:1
so has part: feature:1810962-1811153:1:exon
so has part: feature:1811396-1811491:1:exon
so has part: feature:1812375-1812595:1:exon
so has part: feature:1812768-1812875:1:exon
so has part: feature:1813576-1813696:1:exon
so has part: feature:1813867-1814266:1:exon
so has part: feature:1815678-1815777:1:exon
so has part: feature:1815888-1816051:1:exon
so has part: feature:1816128-1816221:1:exon
so has part: feature:1816418-1816487:1:exon
so has part: feature:1816754-1816846:1:exon
so has part: feature:1817284-1817345:1:exon
so has part: feature:1817615-1817741:1:exon
so has part: feature:1817975-1818123:1:exon
so has part: feature:1818283-1818369:1:exon
so has part: feature:1818896-1819048:1:exon
so has part: feature:1819306-1819417:1:exon
so has part: feature:1819510-1819613:1:exon
so has part: feature:1819736-1819880:1:exon

XP_030358662.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1810962-1811153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1811396-1811491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1812375-1812595:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1812768-1812875:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1813576-1813696:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1813867-1814266:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1815678-1815777:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1815888-1816051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1816128-1816221:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1816418-1816487:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1816754-1816846:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1817284-1817345:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1817615-1817741:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1817975-1818123:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1818283-1818369:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1818896-1819048:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1819306-1819417:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1819510-1819613:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1819736-1819880:1:exon

LPIN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LPIN3
product: lipin 3, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030502803.1
SIO_010081: LPIN3
subclass of: SO_0000673
so part of: LPIN3
location: join(1811562..1812290,1812375..1812595,1812768..1812875,1813576..1813696,1813867..1814266,1815678..1815777,1815888..1816051,1816128..1816221,1816418..1816487,1816754..1816846,1817284..1817345,1817615..1817741,1817975..1818123,1818283..1818369,1818896..1819048,1819306..1819417,1819510..1819613,1819736..1820144)
location: region:1811562-1820144:1
so has part: feature:1811562-1812290:1:exon
so has part: feature:1812375-1812595:1:exon
so has part: feature:1812768-1812875:1:exon
so has part: feature:1813576-1813696:1:exon
so has part: feature:1813867-1814266:1:exon
so has part: feature:1815678-1815777:1:exon
so has part: feature:1815888-1816051:1:exon
so has part: feature:1816128-1816221:1:exon
so has part: feature:1816418-1816487:1:exon
so has part: feature:1816754-1816846:1:exon
so has part: feature:1817284-1817345:1:exon
so has part: feature:1817615-1817741:1:exon
so has part: feature:1817975-1818123:1:exon
so has part: feature:1818283-1818369:1:exon
so has part: feature:1818896-1819048:1:exon
so has part: feature:1819306-1819417:1:exon
so has part: feature:1819510-1819613:1:exon
so has part: feature:1819736-1820144:1:exon

position:1811562:1
position: 1811562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1811562-1812290:1:exon

position:1812290:1
position: 1812290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1812375-1812595:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1812768-1812875:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1813576-1813696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1813867-1814266:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1815678-1815777:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1815888-1816051:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1816128-1816221:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1816418-1816487:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1816754-1816846:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1817284-1817345:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1817615-1817741:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1817975-1818123:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1818283-1818369:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1818896-1819048:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1819306-1819417:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1819510-1819613:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1819736-1820144:1:exon

LPIN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LPIN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidate phosphatase LPIN3 isoform X7
translation: MEQSLEEDAQPPHGQEAALRKRRRRRRKPKRKEVSDTELEGCEETRCEMSMEEPCKLPAPSDSVYFSFADLPEEGTMSLQSPEVHPYSDGELASADSSLLSHPSSPRSDSELEIRPQESFALGTESHVQWTWGRLPQVNKSERVEPAKSTKTIATAETTISAALAPEDEATHLVASSEGVGGGPCPAGPQAIPCSSAVSVIEPASAPRDGNSFPRLQDVPSAARAESLLDTPLPPQEGGRSVVPEVQPGAALGQVNSEGPEPHVESQRRQGAIKRSPHVGPGDVYLPDLSSLAAEQAALRFPRSVLEQSSKPAAAPSSAVGAQLPPHVPADSPTAPELLPAAALSLCGGLGGSRHISHEKFMEHVVSYQQFAENPGLIDDPNLVILLNKKYYNWAVAAPMVLSLQAFQRNIPESTIDQLVKEKMPKKGSRWWFSWRRREFPSEEQQLRPGKANVGMLQPGSTQQRQEEGSSSDEEPLHPGDMLAMDAPEQKSLPTYKKSLRLSSEQIGRLNLQDGPNEVAFSVTTQYQGTCRCEATIYLWNWDDKVVISDIDGTITKSDALGHILPHLGKDWTHHGIAKLFHKIHLNGYKFLYCSARAIGMAHITKGYLKWVNEQGCALPKGPILLAPSSLFSAFHREVIEKKPEVFKVACLKDIQNLFATKLPFYAAFGNRANDVYAYKQVGLPESRIFTVNPKGELIQELTKNHKSTYERLSELVELIFPPLGQSGSVALVCPEYSHFAYWRPPLPAVDLDAFS
SIO_010081: LPIN3
subclass of: SO_0000673
so part of: LPIN3
location: join(1812414..1812595,1812768..1812875,1813576..1813696,1813867..1814266,1815678..1815777,1815888..1816051,1816128..1816221,1816418..1816487,1816754..1816846,1817284..1817345,1817615..1817741,1817975..1818123,1818283..1818369,1818896..1819048,1819306..1819417,1819510..1819613,1819736..1819880)
location: region:1812414-1819880:1
so has part: feature:1812414-1812595:1:exon
so has part: feature:1812768-1812875:1:exon
so has part: feature:1813576-1813696:1:exon
so has part: feature:1813867-1814266:1:exon
so has part: feature:1815678-1815777:1:exon
so has part: feature:1815888-1816051:1:exon
so has part: feature:1816128-1816221:1:exon
so has part: feature:1816418-1816487:1:exon
so has part: feature:1816754-1816846:1:exon
so has part: feature:1817284-1817345:1:exon
so has part: feature:1817615-1817741:1:exon
so has part: feature:1817975-1818123:1:exon
so has part: feature:1818283-1818369:1:exon
so has part: feature:1818896-1819048:1:exon
so has part: feature:1819306-1819417:1:exon
so has part: feature:1819510-1819613:1:exon
so has part: feature:1819736-1819880:1:exon

XP_030358663.1
type: Protein
SIO_000068: ncbiprotein

position:1812414:1
position: 1812414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1812414-1812595:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1812768-1812875:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1813576-1813696:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1813867-1814266:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1815678-1815777:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1815888-1816051:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1816128-1816221:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1816418-1816487:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1816754-1816846:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1817284-1817345:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1817615-1817741:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1817975-1818123:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1818283-1818369:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1818896-1819048:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1819306-1819417:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1819510-1819613:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1819736-1819880:1:exon

EMILIN3
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: EMILIN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1821937..1831638)
location: region:1821937-1831638:-1
so has part: feature:1821937-1831638:-1:exon
subclass of: SO_0000010

115615089
type: Gene
SIO_000068: ncbigene

position:1821937:-1
position: 1821937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1831638:-1
position: 1831638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1821937-1831638:-1:exon

EMILIN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: EMILIN3
product: elastin microfibril interfacer 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 7 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030502804.1
SIO_010081: EMILIN3
subclass of: SO_0000673
so part of: EMILIN3
location: complement(join(1821937..1825391,1825926..1826173,1828069..1828191,1831463..1831638))
location: region:1821937-1831638:-1
so has part: feature:1831463-1831638:-1:exon
so has part: feature:1828069-1828191:-1:exon
so has part: feature:1825926-1826173:-1:exon
so has part: feature:1821937-1825391:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1831463-1831638:-1:exon

position:1831463:-1
position: 1831463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1828069-1828191:-1:exon

position:1828069:-1
position: 1828069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1828191:-1
position: 1828191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1825926-1826173:-1:exon

position:1825926:-1
position: 1825926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1826173:-1
position: 1826173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1821937-1825391:-1:exon

position:1825391:-1
position: 1825391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EMILIN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: EMILIN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EMILIN-3
translation: MRRRGALLCLSLGTLLALADAKGAFYPPAAPLPYGGRYSLYTAGSSPQLGPGKPIGKHKSYCAYVVQRNVTCALQDGAESYVKAEYHKCSWGPKCPGKVLYRTFFRPKYKIGYKTVTELAWRCCPGFMGEGCHDSPTDQPGLLPQQPSPRVPPGQKMFPIPRLPPYPKSHPDLFPGPKKNQYGRKLPGLFGDRLDRLEEEVRRLSQSYDSLHTMVSGLGDRLRLAIQEDTTRMIGSLMNSPGTPDSTVGFGIIPDGLVDAADKADIAAFPPVGDILTKVTEVSDVLKTKADLLHEVRGMVLDHDGQIKHLLESARPSPLTSIDLLEEYVDTRLSNLRGELLDGFEKKLGKIQSTCDFRIQEVRQQCEEEKAANLRLQQTLDGKELEIKKEISQLETQIQGLTVVESCCSNLDYLTDRMNILEKGLHSISESQKNLHSRLDGEISTVTLGNLFEGRFEDLEARLNATERETGSCCSGIEDSMRGTVVAEVDGMRTAFEDKMQTLEDRFMTVMGELNNVSSPIGMDGAVVPVLEGELASMRKRTDEALEVLQNRLITLESTCSLGCSSASKDVETFRTEIEDCQNKNQDLLLRMDSNYDLLRKLNATILEIQRRIEEEASGALQGEITLLKINLNTVSKSLTGLKDSVSQYSDTVAHVNSSLDEHERKIEDEVHSIQEKVNDQGSQLFFSNRRVLNLKGDLERLKARIISDLSSCKNVAHDLQKEIAHFDDRVARVESVCGRLGAITGSLDGVRDELEKHTGSLWDYMDHMNGTLAAHSQEITGLKDNLLDCQAKVSELAEQVGHLEEQAQGKEH
SIO_010081: EMILIN3
subclass of: SO_0000673
so part of: EMILIN3
location: complement(join(1823497..1825391,1825926..1826173,1828069..1828191,1831463..1831638))
location: region:1823497-1831638:-1
so has part: feature:1831463-1831638:-1:exon
so has part: feature:1828069-1828191:-1:exon
so has part: feature:1825926-1826173:-1:exon
so has part: feature:1823497-1825391:-1:exon

XP_030358664.1
type: Protein
SIO_000068: ncbiprotein

position:1823497:-1
position: 1823497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1831463-1831638:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1828069-1828191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1825926-1826173:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1823497-1825391:-1:exon

LOC115615246
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115615246
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2004614..2024027
location: region:2004614-2024027:1
so has part: feature:2004614-2024027:1:exon
subclass of: SO_0000011

115615246
type: Gene
SIO_000068: ncbigene

position:2004614:1
position: 2004614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2024027:1
position: 2024027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2004614-2024027:1:exon

LOC115615246
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2489341
nc RNA class: lncRNA
gene: LOC115615246
product: uncharacterized LOC115615246
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003993996.1
SIO_010081: LOC115615246
subclass of: SO_0000673
so part of: LOC115615246
location: join(2004614..2005167,2023653..2024027)
location: region:2004614-2024027:1
so has part: feature:2004614-2005167:1:exon
so has part: feature:2023653-2024027:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2004614-2005167:1:exon

position:2005167:1
position: 2005167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2023653-2024027:1:exon

position:2023653:1
position: 2023653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115615366
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115615366
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2278814..2289526
location: region:2278814-2289526:1
so has part: feature:2278814-2289526:1:exon
subclass of: SO_0000010

115615366
type: Gene
SIO_000068: ncbigene

position:2278814:1
position: 2278814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2289526:1
position: 2289526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2278814-2289526:1:exon

LOC115615366
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115615366
product: collagen alpha-2(I) chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_030503451.1
SIO_010081: LOC115615366
subclass of: SO_0000673
so part of: LOC115615366
location: join(2278814..2278907,2278991..2279095,2279377..2280740,2285650..2285745,2286509..2286663,2287402..2287595,2287679..2287783,2288094..2289526)
location: region:2278814-2289526:1
so has part: feature:2278814-2278907:1:exon
so has part: feature:2278991-2279095:1:exon
so has part: feature:2279377-2280740:1:exon
so has part: feature:2285650-2285745:1:exon
so has part: feature:2286509-2286663:1:exon
so has part: feature:2287402-2287595:1:exon
so has part: feature:2287679-2287783:1:exon
so has part: feature:2288094-2289526:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2278814-2278907:1:exon

position:2278907:1
position: 2278907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2278991-2279095:1:exon

position:2278991:1
position: 2278991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2279095:1
position: 2279095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2279377-2280740:1:exon

position:2279377:1
position: 2279377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2280740:1
position: 2280740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2285650-2285745:1:exon

position:2285650:1
position: 2285650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2285745:1
position: 2285745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2286509-2286663:1:exon

position:2286509:1
position: 2286509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2286663:1
position: 2286663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2287402-2287595:1:exon

position:2287402:1
position: 2287402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2287595:1
position: 2287595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2287679-2287783:1:exon

position:2287679:1
position: 2287679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2287783:1
position: 2287783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2288094-2289526:1:exon

position:2288094:1
position: 2288094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115615366
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115615366
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-2(I) chain-like
translation: MALPPEQLPPRGPRAPPALGDFMLPESFYPRAFAKLSRLLSQVLPFPVSWIPWTAWAPPDPQAPPPEPGAVGDGAGSAGGPGGPRGSARLPLPLTGLQRAPCGGFEEPQVSSTPWTSPNVLPADTSTLGYGAAALPGAALLGPGGCRTLPAWAAPETPQGPAQHLEPQNHQGRGAEAPGDLVLPAPSPMNQYIEGVPEGINICSTATPAGTPPGSNSPLGSSVPAADEPNHGLGDEEGDIEVTEEMLLKEALRLFGMSEDMGDVILDGPSNVTMPEDHSGTIGEGITVAPAALELPNSISGNENIEGVFPATNISSTATPMATPPSSNSPAGSDIPASPPGDQHNQGPGDSDEDIEVTEEMLLKEALQVFGMSQDMLEVTQDVPGNVTMPGDPGVTIEKQGSVAPDAPVVPNSIPGHENIKGASPAPNISSTVTPGTTPSRSSSPSGSDVPSSPFADPLHQGLGEQDFMLEYAREVEEAVRSIISYEATEGVSQEGPGSSPKPGEPGGAGTSQPARAEKRGSQDIGIPAGGLGMTDEMILEEILYVTGSYLEARGENCGPSVPELLTSIRGYEQLKRLLEDISISSTATSVGSPQGSDIPPQLLWWGHCRAGRNTGSPNIPSGRRQRVLSSGQQPARTMALPPEQVPPRGPRAPPALGDFMLPESFYPQAFTKMSRLLSQVLPFPVSWIPWTAWAPPDPQAPPAEPGAVGGGADSAGGSGGPRGSARLPLPLTGLQRAPCGGFEEPQVSSMPWTSPNVPPADTSTLGYGAAALPGAALLGPGGCGTLPAWAASETPQGSEHHLEPQNHEGRGVEAPGDLVLPAPSPVNQHIEGVAAGINICSMATPAGTPPGSNNPLGSSVPAADGHNHGLGDEESDIEVTEEMLLKEALRLFGMSEDVGDVILDGPGNVTMPGDHSGTIGEGITVAPAALELPNSILGNENIEGVFPATNISSTATPMATPPSSNSPAGSDIPASPPGDQHNQGLGDPDEDIEVTEEMLLKEALWLFGMSQDMLEVTQDVPGNVTMPGDPGVTMEKQGSVASDAPVVPNSIPGHENIEGVSPGPNISSTVTPGTTPPRSSSPSGSDVPSSPFADPLHQGLGEQEFMLEYAREVEEAVRSIISYEATEGVSQEGPGSSPKPGEPGGAGTSQPARTEKRGVKRGGSHLPTPPPKRRPPPRGD
SIO_010081: LOC115615366
subclass of: SO_0000673
so part of: LOC115615366
location: join(2278814..2278907,2278991..2279095,2279377..2280740,2285650..2285745,2286509..2286663,2287402..2287595,2287679..2287783,2288094..2289526)
location: region:2278814-2289526:1
so has part: feature:2278814-2278907:1:exon
so has part: feature:2278991-2279095:1:exon
so has part: feature:2279377-2280740:1:exon
so has part: feature:2285650-2285745:1:exon
so has part: feature:2286509-2286663:1:exon
so has part: feature:2287402-2287595:1:exon
so has part: feature:2287679-2287783:1:exon
so has part: feature:2288094-2289526:1:exon

XP_030359311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2278814-2278907:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2278991-2279095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2279377-2280740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2285650-2285745:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2286509-2286663:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2287402-2287595:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2287679-2287783:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2288094-2289526:1:exon

PTPRT
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: PTPRT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2302401..2749577)
location: region:2302401-2749577:-1
so has part: feature:2302401-2749577:-1:exon
subclass of: SO_0000010

115615119
type: Gene
SIO_000068: ncbigene

position:2302401:-1
position: 2302401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2749577:-1
position: 2749577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2302401-2749577:-1:exon

PTPRT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: PTPRT
product: protein tyrosine phosphatase receptor type T, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 22 long SRA reads, 6 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030502880.1
SIO_010081: PTPRT
subclass of: SO_0000673
so part of: PTPRT
location: complement(join(2302401..2304939,2305780..2305915,2306711..2306874,2308391..2308516,2312264..2312395,2316350..2316523,2319574..2319723,2320704..2320839,2323390..2323544,2324922..2325038,2326800..2326897,2327841..2327877,2328913..2328989,2336991..2337078,2343739..2343926,2359266..2359414,2369379..2369408,2375480..2375615,2390874..2390910,2399649..2399922,2418807..2418909,2422304..2422505,2456972..2457081,2458594..2458890,2520887..2521180,2560158..2560332,2562888..2563003,2565665..2565746,2572341..2572612,2621998..2622123,2748968..2749577))
location: region:2302401-2749577:-1
so has part: feature:2748968-2749577:-1:exon
so has part: feature:2621998-2622123:-1:exon
so has part: feature:2572341-2572612:-1:exon
so has part: feature:2565665-2565746:-1:exon
so has part: feature:2562888-2563003:-1:exon
so has part: feature:2560158-2560332:-1:exon
so has part: feature:2520887-2521180:-1:exon
so has part: feature:2458594-2458890:-1:exon
so has part: feature:2456972-2457081:-1:exon
so has part: feature:2422304-2422505:-1:exon
so has part: feature:2418807-2418909:-1:exon
so has part: feature:2399649-2399922:-1:exon
so has part: feature:2390874-2390910:-1:exon
so has part: feature:2375480-2375615:-1:exon
so has part: feature:2369379-2369408:-1:exon
so has part: feature:2359266-2359414:-1:exon
so has part: feature:2343739-2343926:-1:exon
so has part: feature:2336991-2337078:-1:exon
so has part: feature:2328913-2328989:-1:exon
so has part: feature:2327841-2327877:-1:exon
so has part: feature:2326800-2326897:-1:exon
so has part: feature:2324922-2325038:-1:exon
so has part: feature:2323390-2323544:-1:exon
so has part: feature:2320704-2320839:-1:exon
so has part: feature:2319574-2319723:-1:exon
so has part: feature:2316350-2316523:-1:exon
so has part: feature:2312264-2312395:-1:exon
so has part: feature:2308391-2308516:-1:exon
so has part: feature:2306711-2306874:-1:exon
so has part: feature:2305780-2305915:-1:exon
so has part: feature:2302401-2304939:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2748968-2749577:-1:exon

position:2748968:-1
position: 2748968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2621998-2622123:-1:exon

position:2621998:-1
position: 2621998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2622123:-1
position: 2622123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2572341-2572612:-1:exon

position:2572341:-1
position: 2572341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2572612:-1
position: 2572612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2565665-2565746:-1:exon

position:2565665:-1
position: 2565665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2565746:-1
position: 2565746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2562888-2563003:-1:exon

position:2562888:-1
position: 2562888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2563003:-1
position: 2563003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2560158-2560332:-1:exon

position:2560158:-1
position: 2560158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2560332:-1
position: 2560332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2520887-2521180:-1:exon

position:2520887:-1
position: 2520887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2521180:-1
position: 2521180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2458594-2458890:-1:exon

position:2458594:-1
position: 2458594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2458890:-1
position: 2458890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2456972-2457081:-1:exon

position:2456972:-1
position: 2456972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2457081:-1
position: 2457081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2422304-2422505:-1:exon

position:2422304:-1
position: 2422304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2422505:-1
position: 2422505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2418807-2418909:-1:exon

position:2418807:-1
position: 2418807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2418909:-1
position: 2418909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2399649-2399922:-1:exon

position:2399649:-1
position: 2399649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2399922:-1
position: 2399922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2390874-2390910:-1:exon

position:2390874:-1
position: 2390874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2390910:-1
position: 2390910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2375480-2375615:-1:exon

position:2375480:-1
position: 2375480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2375615:-1
position: 2375615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2369379-2369408:-1:exon

position:2369379:-1
position: 2369379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2369408:-1
position: 2369408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2359266-2359414:-1:exon

position:2359266:-1
position: 2359266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2359414:-1
position: 2359414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2343739-2343926:-1:exon

position:2343739:-1
position: 2343739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2343926:-1
position: 2343926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2336991-2337078:-1:exon

position:2336991:-1
position: 2336991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2337078:-1
position: 2337078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2328913-2328989:-1:exon

position:2328913:-1
position: 2328913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2328989:-1
position: 2328989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2327841-2327877:-1:exon

position:2327841:-1
position: 2327841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2327877:-1
position: 2327877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2326800-2326897:-1:exon

position:2326800:-1
position: 2326800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2326897:-1
position: 2326897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2324922-2325038:-1:exon

position:2324922:-1
position: 2324922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2325038:-1
position: 2325038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2323390-2323544:-1:exon

position:2323390:-1
position: 2323390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2323544:-1
position: 2323544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2320704-2320839:-1:exon

position:2320704:-1
position: 2320704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2320839:-1
position: 2320839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2319574-2319723:-1:exon

position:2319574:-1
position: 2319574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2319723:-1
position: 2319723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2316350-2316523:-1:exon

position:2316350:-1
position: 2316350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2316523:-1
position: 2316523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2312264-2312395:-1:exon

position:2312264:-1
position: 2312264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2312395:-1
position: 2312395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2308391-2308516:-1:exon

position:2308391:-1
position: 2308391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2308516:-1
position: 2308516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2306711-2306874:-1:exon

position:2306711:-1
position: 2306711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2306874:-1
position: 2306874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2305780-2305915:-1:exon

position:2305780:-1
position: 2305780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2305915:-1
position: 2305915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2302401-2304939:-1:exon

position:2304939:-1
position: 2304939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PTPRT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: PTPRT
product: protein tyrosine phosphatase receptor type T, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 21 long SRA reads, 4 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030502878.1
SIO_010081: PTPRT
subclass of: SO_0000673
so part of: PTPRT
location: complement(join(2302401..2304939,2305780..2305915,2306711..2306874,2308391..2308516,2312264..2312395,2316350..2316523,2319574..2319723,2320704..2320839,2323390..2323544,2324922..2325038,2326800..2326897,2327841..2327877,2328913..2328989,2336991..2337078,2343739..2343926,2352839..2352874,2353070..2353147,2359266..2359414,2361613..2361660,2369379..2369408,2375480..2375615,2385714..2385770,2390874..2390910,2399649..2399922,2418807..2418909,2422304..2422505,2456972..2457081,2458594..2458890,2520887..2521180,2560158..2560332,2562888..2563003,2565665..2565746,2572341..2572612,2621998..2622123,2748968..2749577))
location: region:2302401-2749577:-1
so has part: feature:2748968-2749577:-1:exon
so has part: feature:2621998-2622123:-1:exon
so has part: feature:2572341-2572612:-1:exon
so has part: feature:2565665-2565746:-1:exon
so has part: feature:2562888-2563003:-1:exon
so has part: feature:2560158-2560332:-1:exon
so has part: feature:2520887-2521180:-1:exon
so has part: feature:2458594-2458890:-1:exon
so has part: feature:2456972-2457081:-1:exon
so has part: feature:2422304-2422505:-1:exon
so has part: feature:2418807-2418909:-1:exon
so has part: feature:2399649-2399922:-1:exon
so has part: feature:2390874-2390910:-1:exon
so has part: feature:2385714-2385770:-1:exon
so has part: feature:2375480-2375615:-1:exon
so has part: feature:2369379-2369408:-1:exon
so has part: feature:2361613-2361660:-1:exon
so has part: feature:2359266-2359414:-1:exon
so has part: feature:2353070-2353147:-1:exon
so has part: feature:2352839-2352874:-1:exon
so has part: feature:2343739-2343926:-1:exon
so has part: feature:2336991-2337078:-1:exon
so has part: feature:2328913-2328989:-1:exon
so has part: feature:2327841-2327877:-1:exon
so has part: feature:2326800-2326897:-1:exon
so has part: feature:2324922-2325038:-1:exon
so has part: feature:2323390-2323544:-1:exon
so has part: feature:2320704-2320839:-1:exon
so has part: feature:2319574-2319723:-1:exon
so has part: feature:2316350-2316523:-1:exon
so has part: feature:2312264-2312395:-1:exon
so has part: feature:2308391-2308516:-1:exon
so has part: feature:2306711-2306874:-1:exon
so has part: feature:2305780-2305915:-1:exon
so has part: feature:2302401-2304939:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2748968-2749577:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2621998-2622123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2572341-2572612:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2565665-2565746:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2562888-2563003:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2560158-2560332:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2520887-2521180:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2458594-2458890:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2456972-2457081:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2422304-2422505:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2418807-2418909:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2399649-2399922:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2390874-2390910:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2385714-2385770:-1:exon

position:2385714:-1
position: 2385714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2385770:-1
position: 2385770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2375480-2375615:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2369379-2369408:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2361613-2361660:-1:exon

position:2361613:-1
position: 2361613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2361660:-1
position: 2361660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2359266-2359414:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2353070-2353147:-1:exon

position:2353070:-1
position: 2353070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2353147:-1
position: 2353147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2352839-2352874:-1:exon

position:2352839:-1
position: 2352839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2352874:-1
position: 2352874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2343739-2343926:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2336991-2337078:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2328913-2328989:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2327841-2327877:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2326800-2326897:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2324922-2325038:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2323390-2323544:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2320704-2320839:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2319574-2319723:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2316350-2316523:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2312264-2312395:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2308391-2308516:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2306711-2306874:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2305780-2305915:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2302401-2304939:-1:exon

PTPRT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: PTPRT
product: protein tyrosine phosphatase receptor type T, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 16 long SRA reads, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030502879.1
SIO_010081: PTPRT
subclass of: SO_0000673
so part of: PTPRT
location: complement(join(2302401..2304939,2305780..2305915,2306711..2306874,2308391..2308516,2312264..2312395,2316350..2316523,2319574..2319723,2320704..2320839,2323390..2323544,2324922..2325038,2326800..2326897,2327841..2327877,2328913..2328989,2336991..2337078,2343739..2343926,2352839..2352874,2353070..2353147,2359266..2359414,2361613..2361660,2369379..2369408,2375480..2375615,2385714..2385770,2390874..2390910,2399649..2399922,2418807..2418909,2422304..2422505,2456972..2457081,2458594..2458890,2520887..2521180,2560158..2560332,2562888..2563003,2565665..2565746,2572341..2572612,2620363..2620458))
location: region:2302401-2620458:-1
so has part: feature:2620363-2620458:-1:exon
so has part: feature:2572341-2572612:-1:exon
so has part: feature:2565665-2565746:-1:exon
so has part: feature:2562888-2563003:-1:exon
so has part: feature:2560158-2560332:-1:exon
so has part: feature:2520887-2521180:-1:exon
so has part: feature:2458594-2458890:-1:exon
so has part: feature:2456972-2457081:-1:exon
so has part: feature:2422304-2422505:-1:exon
so has part: feature:2418807-2418909:-1:exon
so has part: feature:2399649-2399922:-1:exon
so has part: feature:2390874-2390910:-1:exon
so has part: feature:2385714-2385770:-1:exon
so has part: feature:2375480-2375615:-1:exon
so has part: feature:2369379-2369408:-1:exon
so has part: feature:2361613-2361660:-1:exon
so has part: feature:2359266-2359414:-1:exon
so has part: feature:2353070-2353147:-1:exon
so has part: feature:2352839-2352874:-1:exon
so has part: feature:2343739-2343926:-1:exon
so has part: feature:2336991-2337078:-1:exon
so has part: feature:2328913-2328989:-1:exon
so has part: feature:2327841-2327877:-1:exon
so has part: feature:2326800-2326897:-1:exon
so has part: feature:2324922-2325038:-1:exon
so has part: feature:2323390-2323544:-1:exon
so has part: feature:2320704-2320839:-1:exon
so has part: feature:2319574-2319723:-1:exon
so has part: feature:2316350-2316523:-1:exon
so has part: feature:2312264-2312395:-1:exon
so has part: feature:2308391-2308516:-1:exon
so has part: feature:2306711-2306874:-1:exon
so has part: feature:2305780-2305915:-1:exon
so has part: feature:2302401-2304939:-1:exon

position:2620458:-1
position: 2620458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2620363-2620458:-1:exon

position:2620363:-1
position: 2620363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2572341-2572612:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2565665-2565746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2562888-2563003:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2560158-2560332:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2520887-2521180:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2458594-2458890:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2456972-2457081:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2422304-2422505:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2418807-2418909:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2399649-2399922:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2390874-2390910:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2385714-2385770:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2375480-2375615:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2369379-2369408:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2361613-2361660:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2359266-2359414:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2353070-2353147:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2352839-2352874:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2343739-2343926:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2336991-2337078:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2328913-2328989:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2327841-2327877:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2326800-2326897:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2324922-2325038:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2323390-2323544:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2320704-2320839:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2319574-2319723:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2316350-2316523:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2312264-2312395:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2308391-2308516:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2306711-2306874:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2305780-2305915:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2302401-2304939:-1:exon

PTPRT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: PTPRT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-type tyrosine-protein phosphatase T isoform X3
translation: MTGVAAIVFLLQLLPKAEGQVFAGGCSFDEHYSNCGYSVALGTNGFTWEQINTWEKPTMDPAVPTGSFMMVNSSGRASGQKAHLLLPTLKENDTHCIDFHYYLSSRDRSSPGSLNVYVKVNGGPQGNPIWNVSGVVTEGWVKAELAISTFWPHFYQVIFESVSLKGHPGYIAVDEVRVLAHPCRKAPHFLRLQNVEVNVGQNATFQCIAGGKWSQHDKLWLQQWNGRDTALMVTRVVNHRRFSATVSVADTSQRSISKYRCVIRSDGGSGVSNYAELIVKEPPTPIAPPELLAVGATYLWIKPNANSIIGDGPIILKEVEYRTTTGNWAETHIVDSPNYKLWHLDPDVEYEIRVLLTRPGEGGTGPPGPPLTTRTKCADPVHGPQNVEVVDIRSRQLTLQWEPFGYAVTRCHSYNLTVQYQYVFNQQKFEAEELIQTSSHYTLRGLRPFMTIRLRLALSNPEGKMESEELVVQTEEDVPGPVPLESIQGGPFEEKIYVQWKPPNETNGIITLYEITYKAVGSLDPSADLSSQRGKVFKLRNETHHLFVGLYPGTTYSFTIKASTVKGFGPPITTRIATKISAPSMPEYDTDSPLNETDTTITVMLKPAQSRGAPVSVYQLVVKEEKLQKARRAADIIECFSVPVSYKNASSLDSPHYFAAELKPINLPVTQPFTVGDNKTYNGYWNAPLSPLKSYSIYFQALSKANGETKINCVRLATKGASTQNSNAVEPEKQVDSTVKMAGVIAGLLMFVIILLGAMLTIKRRRNAYSYSYYLKLAKKQKETQTSTQREMGPMATSDKTSTKLSAVHNEEAFSSSCQDVNGFNSSHGEMTQPTLTIQTHPFRSCEPVEMSYPRGQFQPAIRVADLLQHITQMKRGQGYGFKEEYEALPEGQTASWDTAKEDENRNKNRYGNIISYDHSRVRLQLLDGDPHSDYINANYIDGYHRPRHYIATQGPMQETVKDFWRMIWQENSASVVMVTNLVEVGRVKCVRYWPDDTEVYGDIKVTLIETEPLAEYVIRTFTVQKKGYHEIREIRQFHFTSWPDHGVPCYATGLLGFVRQVKFLNPPEAGPIVVHCSAGAGRTGCFIAIDIMLDMAENEGVVDIFNCVRELRSQRVNLVQTEEQYVFVHDAILEACLCGNTAIPVCEFRSIYYNISRLDPQTNSSQIKDEFQTLNIVTPRVRPEDCSIGLLPRNHDKNRCMDVLPLDRCLPFLISVDGESSNYINAALMDSHKQPAAFIVTQHPLPNTVADFWRLVFDYNCSSVVMLNEMDAAQLCMQYWPEKTSCCYGPIQVEFVSADIDEDIINRIFRICNMARPQDGYRIVQHLQYIGWPAYRDTPPSKRSLLKVVRRLEKWQEQYDGRDGRTVVHCLNGGGRSGTFCAICSVCEMIQQQNIIDVFHIVKTLRNNKSNMVESLEQYRFVYEVALEYLSSF
SIO_010081: PTPRT
subclass of: SO_0000673
so part of: PTPRT
location: complement(join(2304886..2304939,2305780..2305915,2306711..2306874,2308391..2308516,2312264..2312395,2316350..2316523,2319574..2319723,2320704..2320839,2323390..2323544,2324922..2325038,2326800..2326897,2327841..2327877,2328913..2328989,2336991..2337078,2343739..2343926,2359266..2359414,2369379..2369408,2375480..2375615,2390874..2390910,2399649..2399922,2418807..2418909,2422304..2422505,2456972..2457081,2458594..2458890,2520887..2521180,2560158..2560332,2562888..2563003,2565665..2565746,2572341..2572612,2621998..2622123,2748968..2749037))
location: region:2304886-2749037:-1
so has part: feature:2748968-2749037:-1:exon
so has part: feature:2621998-2622123:-1:exon
so has part: feature:2572341-2572612:-1:exon
so has part: feature:2565665-2565746:-1:exon
so has part: feature:2562888-2563003:-1:exon
so has part: feature:2560158-2560332:-1:exon
so has part: feature:2520887-2521180:-1:exon
so has part: feature:2458594-2458890:-1:exon
so has part: feature:2456972-2457081:-1:exon
so has part: feature:2422304-2422505:-1:exon
so has part: feature:2418807-2418909:-1:exon
so has part: feature:2399649-2399922:-1:exon
so has part: feature:2390874-2390910:-1:exon
so has part: feature:2375480-2375615:-1:exon
so has part: feature:2369379-2369408:-1:exon
so has part: feature:2359266-2359414:-1:exon
so has part: feature:2343739-2343926:-1:exon
so has part: feature:2336991-2337078:-1:exon
so has part: feature:2328913-2328989:-1:exon
so has part: feature:2327841-2327877:-1:exon
so has part: feature:2326800-2326897:-1:exon
so has part: feature:2324922-2325038:-1:exon
so has part: feature:2323390-2323544:-1:exon
so has part: feature:2320704-2320839:-1:exon
so has part: feature:2319574-2319723:-1:exon
so has part: feature:2316350-2316523:-1:exon
so has part: feature:2312264-2312395:-1:exon
so has part: feature:2308391-2308516:-1:exon
so has part: feature:2306711-2306874:-1:exon
so has part: feature:2305780-2305915:-1:exon
so has part: feature:2304886-2304939:-1:exon

XP_030358740.1
type: Protein
SIO_000068: ncbiprotein

position:2304886:-1
position: 2304886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2749037:-1
position: 2749037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2748968-2749037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2621998-2622123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2572341-2572612:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2565665-2565746:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2562888-2563003:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2560158-2560332:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2520887-2521180:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2458594-2458890:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2456972-2457081:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2422304-2422505:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2418807-2418909:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2399649-2399922:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2390874-2390910:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2375480-2375615:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2369379-2369408:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2359266-2359414:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2343739-2343926:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2336991-2337078:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2328913-2328989:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2327841-2327877:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2326800-2326897:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2324922-2325038:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2323390-2323544:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2320704-2320839:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2319574-2319723:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2316350-2316523:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2312264-2312395:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2308391-2308516:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2306711-2306874:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2305780-2305915:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2304886-2304939:-1:exon

PTPRT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: PTPRT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-type tyrosine-protein phosphatase T isoform X1
translation: MTGVAAIVFLLQLLPKAEGQVFAGGCSFDEHYSNCGYSVALGTNGFTWEQINTWEKPTMDPAVPTGSFMMVNSSGRASGQKAHLLLPTLKENDTHCIDFHYYLSSRDRSSPGSLNVYVKVNGGPQGNPIWNVSGVVTEGWVKAELAISTFWPHFYQVIFESVSLKGHPGYIAVDEVRVLAHPCRKAPHFLRLQNVEVNVGQNATFQCIAGGKWSQHDKLWLQQWNGRDTALMVTRVVNHRRFSATVSVADTSQRSISKYRCVIRSDGGSGVSNYAELIVKEPPTPIAPPELLAVGATYLWIKPNANSIIGDGPIILKEVEYRTTTGNWAETHIVDSPNYKLWHLDPDVEYEIRVLLTRPGEGGTGPPGPPLTTRTKCADPVHGPQNVEVVDIRSRQLTLQWEPFGYAVTRCHSYNLTVQYQYVFNQQKFEAEELIQTSSHYTLRGLRPFMTIRLRLALSNPEGKMESEELVVQTEEDVPGPVPLESIQGGPFEEKIYVQWKPPNETNGIITLYEITYKAVGSLDPSADLSSQRGKVFKLRNETHHLFVGLYPGTTYSFTIKASTVKGFGPPITTRIATKISAPSMPEYDTDSPLNETDTTITVMLKPAQSRGAPVSVYQLVVKEEKLQKARRAADIIECFSVPVSYKNASSLDSPHYFAAELKPINLPVTQPFTVGDNKTYNGYWNAPLSPLKSYSIYFQALSKANGETKINCVRLATKAVMDRQQVTTRNLPSVLSTGASTQNSNAVEPEKQVDSTVKMAGVIAGLLMFVIILLGAMLTIKRRRNAYSYSYYLHSSQCFRGLSVFYRTRKLAKKQKETQTSTQREMGPMATSDKTSTKLSAVHNEEAFSSSCQDVNGFTSPSPCSFSVQSKTLQSKSLLNSYYSVTSDTVPSTTLLDSSHGEMTQPTLTIQTHPFRSCEPVEMSYPRGQFQPAIRVADLLQHITQMKRGQGYGFKEEYEALPEGQTASWDTAKEDENRNKNRYGNIISYDHSRVRLQLLDGDPHSDYINANYIDGYHRPRHYIATQGPMQETVKDFWRMIWQENSASVVMVTNLVEVGRVKCVRYWPDDTEVYGDIKVTLIETEPLAEYVIRTFTVQKKGYHEIREIRQFHFTSWPDHGVPCYATGLLGFVRQVKFLNPPEAGPIVVHCSAGAGRTGCFIAIDIMLDMAENEGVVDIFNCVRELRSQRVNLVQTEEQYVFVHDAILEACLCGNTAIPVCEFRSIYYNISRLDPQTNSSQIKDEFQTLNIVTPRVRPEDCSIGLLPRNHDKNRCMDVLPLDRCLPFLISVDGESSNYINAALMDSHKQPAAFIVTQHPLPNTVADFWRLVFDYNCSSVVMLNEMDAAQLCMQYWPEKTSCCYGPIQVEFVSADIDEDIINRIFRICNMARPQDGYRIVQHLQYIGWPAYRDTPPSKRSLLKVVRRLEKWQEQYDGRDGRTVVHCLNGGGRSGTFCAICSVCEMIQQQNIIDVFHIVKTLRNNKSNMVESLEQYRFVYEVALEYLSSF
SIO_010081: PTPRT
subclass of: SO_0000673
so part of: PTPRT
location: complement(join(2304886..2304939,2305780..2305915,2306711..2306874,2308391..2308516,2312264..2312395,2316350..2316523,2319574..2319723,2320704..2320839,2323390..2323544,2324922..2325038,2326800..2326897,2327841..2327877,2328913..2328989,2336991..2337078,2343739..2343926,2352839..2352874,2353070..2353147,2359266..2359414,2361613..2361660,2369379..2369408,2375480..2375615,2385714..2385770,2390874..2390910,2399649..2399922,2418807..2418909,2422304..2422505,2456972..2457081,2458594..2458890,2520887..2521180,2560158..2560332,2562888..2563003,2565665..2565746,2572341..2572612,2621998..2622123,2748968..2749037))
location: region:2304886-2749037:-1
so has part: feature:2748968-2749037:-1:exon
so has part: feature:2621998-2622123:-1:exon
so has part: feature:2572341-2572612:-1:exon
so has part: feature:2565665-2565746:-1:exon
so has part: feature:2562888-2563003:-1:exon
so has part: feature:2560158-2560332:-1:exon
so has part: feature:2520887-2521180:-1:exon
so has part: feature:2458594-2458890:-1:exon
so has part: feature:2456972-2457081:-1:exon
so has part: feature:2422304-2422505:-1:exon
so has part: feature:2418807-2418909:-1:exon
so has part: feature:2399649-2399922:-1:exon
so has part: feature:2390874-2390910:-1:exon
so has part: feature:2385714-2385770:-1:exon
so has part: feature:2375480-2375615:-1:exon
so has part: feature:2369379-2369408:-1:exon
so has part: feature:2361613-2361660:-1:exon
so has part: feature:2359266-2359414:-1:exon
so has part: feature:2353070-2353147:-1:exon
so has part: feature:2352839-2352874:-1:exon
so has part: feature:2343739-2343926:-1:exon
so has part: feature:2336991-2337078:-1:exon
so has part: feature:2328913-2328989:-1:exon
so has part: feature:2327841-2327877:-1:exon
so has part: feature:2326800-2326897:-1:exon
so has part: feature:2324922-2325038:-1:exon
so has part: feature:2323390-2323544:-1:exon
so has part: feature:2320704-2320839:-1:exon
so has part: feature:2319574-2319723:-1:exon
so has part: feature:2316350-2316523:-1:exon
so has part: feature:2312264-2312395:-1:exon
so has part: feature:2308391-2308516:-1:exon
so has part: feature:2306711-2306874:-1:exon
so has part: feature:2305780-2305915:-1:exon
so has part: feature:2304886-2304939:-1:exon

XP_030358738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2748968-2749037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2621998-2622123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2572341-2572612:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2565665-2565746:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2562888-2563003:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2560158-2560332:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2520887-2521180:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2458594-2458890:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2456972-2457081:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2422304-2422505:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2418807-2418909:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2399649-2399922:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2390874-2390910:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2385714-2385770:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2375480-2375615:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2369379-2369408:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2361613-2361660:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2359266-2359414:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2353070-2353147:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2352839-2352874:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2343739-2343926:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2336991-2337078:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2328913-2328989:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2327841-2327877:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2326800-2326897:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2324922-2325038:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2323390-2323544:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2320704-2320839:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2319574-2319723:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2316350-2316523:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2312264-2312395:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2308391-2308516:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2306711-2306874:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2305780-2305915:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2304886-2304939:-1:exon

PTPRT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: PTPRT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-type tyrosine-protein phosphatase T isoform X2
translation: MMVNSSGRASGQKAHLLLPTLKENDTHCIDFHYYLSSRDRSSPGSLNVYVKVNGGPQGNPIWNVSGVVTEGWVKAELAISTFWPHFYQVIFESVSLKGHPGYIAVDEVRVLAHPCRKAPHFLRLQNVEVNVGQNATFQCIAGGKWSQHDKLWLQQWNGRDTALMVTRVVNHRRFSATVSVADTSQRSISKYRCVIRSDGGSGVSNYAELIVKEPPTPIAPPELLAVGATYLWIKPNANSIIGDGPIILKEVEYRTTTGNWAETHIVDSPNYKLWHLDPDVEYEIRVLLTRPGEGGTGPPGPPLTTRTKCADPVHGPQNVEVVDIRSRQLTLQWEPFGYAVTRCHSYNLTVQYQYVFNQQKFEAEELIQTSSHYTLRGLRPFMTIRLRLALSNPEGKMESEELVVQTEEDVPGPVPLESIQGGPFEEKIYVQWKPPNETNGIITLYEITYKAVGSLDPSADLSSQRGKVFKLRNETHHLFVGLYPGTTYSFTIKASTVKGFGPPITTRIATKISAPSMPEYDTDSPLNETDTTITVMLKPAQSRGAPVSVYQLVVKEEKLQKARRAADIIECFSVPVSYKNASSLDSPHYFAAELKPINLPVTQPFTVGDNKTYNGYWNAPLSPLKSYSIYFQALSKANGETKINCVRLATKAVMDRQQVTTRNLPSVLSTGASTQNSNAVEPEKQVDSTVKMAGVIAGLLMFVIILLGAMLTIKRRRNAYSYSYYLHSSQCFRGLSVFYRTRKLAKKQKETQTSTQREMGPMATSDKTSTKLSAVHNEEAFSSSCQDVNGFTSPSPCSFSVQSKTLQSKSLLNSYYSVTSDTVPSTTLLDSSHGEMTQPTLTIQTHPFRSCEPVEMSYPRGQFQPAIRVADLLQHITQMKRGQGYGFKEEYEALPEGQTASWDTAKEDENRNKNRYGNIISYDHSRVRLQLLDGDPHSDYINANYIDGYHRPRHYIATQGPMQETVKDFWRMIWQENSASVVMVTNLVEVGRVKCVRYWPDDTEVYGDIKVTLIETEPLAEYVIRTFTVQKKGYHEIREIRQFHFTSWPDHGVPCYATGLLGFVRQVKFLNPPEAGPIVVHCSAGAGRTGCFIAIDIMLDMAENEGVVDIFNCVRELRSQRVNLVQTEEQYVFVHDAILEACLCGNTAIPVCEFRSIYYNISRLDPQTNSSQIKDEFQTLNIVTPRVRPEDCSIGLLPRNHDKNRCMDVLPLDRCLPFLISVDGESSNYINAALMDSHKQPAAFIVTQHPLPNTVADFWRLVFDYNCSSVVMLNEMDAAQLCMQYWPEKTSCCYGPIQVEFVSADIDEDIINRIFRICNMARPQDGYRIVQHLQYIGWPAYRDTPPSKRSLLKVVRRLEKWQEQYDGRDGRTVVHCLNGGGRSGTFCAICSVCEMIQQQNIIDVFHIVKTLRNNKSNMVESLEQYRFVYEVALEYLSSF
SIO_010081: PTPRT
subclass of: SO_0000673
so part of: PTPRT
location: complement(join(2304886..2304939,2305780..2305915,2306711..2306874,2308391..2308516,2312264..2312395,2316350..2316523,2319574..2319723,2320704..2320839,2323390..2323544,2324922..2325038,2326800..2326897,2327841..2327877,2328913..2328989,2336991..2337078,2343739..2343926,2352839..2352874,2353070..2353147,2359266..2359414,2361613..2361660,2369379..2369408,2375480..2375615,2385714..2385770,2390874..2390910,2399649..2399922,2418807..2418909,2422304..2422505,2456972..2457081,2458594..2458890,2520887..2521180,2560158..2560332,2562888..2563003,2565665..2565746,2572341..2572604))
location: region:2304886-2572604:-1
so has part: feature:2572341-2572604:-1:exon
so has part: feature:2565665-2565746:-1:exon
so has part: feature:2562888-2563003:-1:exon
so has part: feature:2560158-2560332:-1:exon
so has part: feature:2520887-2521180:-1:exon
so has part: feature:2458594-2458890:-1:exon
so has part: feature:2456972-2457081:-1:exon
so has part: feature:2422304-2422505:-1:exon
so has part: feature:2418807-2418909:-1:exon
so has part: feature:2399649-2399922:-1:exon
so has part: feature:2390874-2390910:-1:exon
so has part: feature:2385714-2385770:-1:exon
so has part: feature:2375480-2375615:-1:exon
so has part: feature:2369379-2369408:-1:exon
so has part: feature:2361613-2361660:-1:exon
so has part: feature:2359266-2359414:-1:exon
so has part: feature:2353070-2353147:-1:exon
so has part: feature:2352839-2352874:-1:exon
so has part: feature:2343739-2343926:-1:exon
so has part: feature:2336991-2337078:-1:exon
so has part: feature:2328913-2328989:-1:exon
so has part: feature:2327841-2327877:-1:exon
so has part: feature:2326800-2326897:-1:exon
so has part: feature:2324922-2325038:-1:exon
so has part: feature:2323390-2323544:-1:exon
so has part: feature:2320704-2320839:-1:exon
so has part: feature:2319574-2319723:-1:exon
so has part: feature:2316350-2316523:-1:exon
so has part: feature:2312264-2312395:-1:exon
so has part: feature:2308391-2308516:-1:exon
so has part: feature:2306711-2306874:-1:exon
so has part: feature:2305780-2305915:-1:exon
so has part: feature:2304886-2304939:-1:exon

XP_030358739.1
type: Protein
SIO_000068: ncbiprotein

position:2572604:-1
position: 2572604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2572341-2572604:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2565665-2565746:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2562888-2563003:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2560158-2560332:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2520887-2521180:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2458594-2458890:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2456972-2457081:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2422304-2422505:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2418807-2418909:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2399649-2399922:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2390874-2390910:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2385714-2385770:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2375480-2375615:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2369379-2369408:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2361613-2361660:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2359266-2359414:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2353070-2353147:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2352839-2352874:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2343739-2343926:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2336991-2337078:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2328913-2328989:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2327841-2327877:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2326800-2326897:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2324922-2325038:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2323390-2323544:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2320704-2320839:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2319574-2319723:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2316350-2316523:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2312264-2312395:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2308391-2308516:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2306711-2306874:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2305780-2305915:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2304886-2304939:-1:exon

LOC115615321
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115615321
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2869958..2875244)
location: region:2869958-2875244:-1
so has part: feature:2869958-2875244:-1:exon
subclass of: SO_0000011

115615321
type: Gene
SIO_000068: ncbigene

position:2869958:-1
position: 2869958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2875244:-1
position: 2875244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2869958-2875244:-1:exon

LOC115615321
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2489341
nc RNA class: lncRNA
gene: LOC115615321
product: uncharacterized LOC115615321
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003994018.1
SIO_010081: LOC115615321
subclass of: SO_0000673
so part of: LOC115615321
location: complement(join(2869958..2870170,2870243..2870436,2871698..2871864,2872659..2872850,2875011..2875244))
location: region:2869958-2875244:-1
so has part: feature:2875011-2875244:-1:exon
so has part: feature:2872659-2872850:-1:exon
so has part: feature:2871698-2871864:-1:exon
so has part: feature:2870243-2870436:-1:exon
so has part: feature:2869958-2870170:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2875011-2875244:-1:exon

position:2875011:-1
position: 2875011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2872659-2872850:-1:exon

position:2872659:-1
position: 2872659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2872850:-1
position: 2872850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2871698-2871864:-1:exon

position:2871698:-1
position: 2871698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2871864:-1
position: 2871864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2870243-2870436:-1:exon

position:2870243:-1
position: 2870243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2870436:-1
position: 2870436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2869958-2870170:-1:exon

position:2870170:-1
position: 2870170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115615065
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115615065
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2875479..2878133)
location: region:2875479-2878133:-1
so has part: feature:2875479-2878133:-1:exon
subclass of: SO_0000011

115615065
type: Gene
SIO_000068: ncbigene

position:2875479:-1
position: 2875479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2878133:-1
position: 2878133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2875479-2878133:-1:exon

LOC115615065
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2489341
nc RNA class: lncRNA
gene: LOC115615065
product: uncharacterized LOC115615065
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003993940.1
SIO_010081: LOC115615065
subclass of: SO_0000673
so part of: LOC115615065
location: complement(join(2875479..2875568,2876612..2876670,2878047..2878133))
location: region:2875479-2878133:-1
so has part: feature:2878047-2878133:-1:exon
so has part: feature:2876612-2876670:-1:exon
so has part: feature:2875479-2875568:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2878047-2878133:-1:exon

position:2878047:-1
position: 2878047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2876612-2876670:-1:exon

position:2876612:-1
position: 2876612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2876670:-1
position: 2876670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2875479-2875568:-1:exon

position:2875568:-1
position: 2875568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SOGA1
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: SOGA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2969573..2987899
location: region:2969573-2987899:1
so has part: feature:2969573-2987899:1:exon
subclass of: SO_0000010

115614969
type: Gene
SIO_000068: ncbigene

position:2969573:1
position: 2969573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2987899:1
position: 2987899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2969573-2987899:1:exon

SOGA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: SOGA1
product: suppressor of glucose, autophagy associated 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 121 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030502520.1
SIO_010081: SOGA1
subclass of: SO_0000673
so part of: SOGA1
location: join(2969573..2969794,2971322..2971480,2974375..2974437,2976867..2978087,2979045..2979164,2979295..2979420,2980473..2980703,2980859..2980966,2981220..2981387,2982391..2982642,2982738..2982809,2983170..2983240,2983494..2984943,2985037..2987899)
location: region:2969573-2987899:1
so has part: feature:2969573-2969794:1:exon
so has part: feature:2971322-2971480:1:exon
so has part: feature:2974375-2974437:1:exon
so has part: feature:2976867-2978087:1:exon
so has part: feature:2979045-2979164:1:exon
so has part: feature:2979295-2979420:1:exon
so has part: feature:2980473-2980703:1:exon
so has part: feature:2980859-2980966:1:exon
so has part: feature:2981220-2981387:1:exon
so has part: feature:2982391-2982642:1:exon
so has part: feature:2982738-2982809:1:exon
so has part: feature:2983170-2983240:1:exon
so has part: feature:2983494-2984943:1:exon
so has part: feature:2985037-2987899:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2969573-2969794:1:exon

position:2969794:1
position: 2969794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2971322-2971480:1:exon

position:2971322:1
position: 2971322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2971480:1
position: 2971480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2974375-2974437:1:exon

position:2974375:1
position: 2974375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2974437:1
position: 2974437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2976867-2978087:1:exon

position:2976867:1
position: 2976867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2978087:1
position: 2978087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2979045-2979164:1:exon

position:2979045:1
position: 2979045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2979164:1
position: 2979164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2979295-2979420:1:exon

position:2979295:1
position: 2979295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2979420:1
position: 2979420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2980473-2980703:1:exon

position:2980473:1
position: 2980473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2980703:1
position: 2980703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2980859-2980966:1:exon

position:2980859:1
position: 2980859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2980966:1
position: 2980966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2981220-2981387:1:exon

position:2981220:1
position: 2981220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2981387:1
position: 2981387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2982391-2982642:1:exon

position:2982391:1
position: 2982391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2982642:1
position: 2982642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2982738-2982809:1:exon

position:2982738:1
position: 2982738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2982809:1
position: 2982809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2983170-2983240:1:exon

position:2983170:1
position: 2983170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2983240:1
position: 2983240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2983494-2984943:1:exon

position:2983494:1
position: 2983494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2984943:1
position: 2984943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2985037-2987899:1:exon

position:2985037:1
position: 2985037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SOGA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: SOGA1
product: suppressor of glucose, autophagy associated 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 121 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030502521.2
SIO_010081: SOGA1
subclass of: SO_0000673
so part of: SOGA1
location: join(2969574..2969794,2971322..2971480,2974375..2974437,2976867..2978087,2979048..2979164,2979295..2979420,2980473..2980703,2980859..2980966,2981220..2981387,2982391..2982642,2982738..2982809,2983170..2983240,2983494..2984943,2985037..2987899)
location: region:2969574-2987899:1
so has part: feature:2969574-2969794:1:exon
so has part: feature:2971322-2971480:1:exon
so has part: feature:2974375-2974437:1:exon
so has part: feature:2976867-2978087:1:exon
so has part: feature:2979048-2979164:1:exon
so has part: feature:2979295-2979420:1:exon
so has part: feature:2980473-2980703:1:exon
so has part: feature:2980859-2980966:1:exon
so has part: feature:2981220-2981387:1:exon
so has part: feature:2982391-2982642:1:exon
so has part: feature:2982738-2982809:1:exon
so has part: feature:2983170-2983240:1:exon
so has part: feature:2983494-2984943:1:exon
so has part: feature:2985037-2987899:1:exon

position:2969574:1
position: 2969574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2969574-2969794:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2971322-2971480:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2974375-2974437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2976867-2978087:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2979048-2979164:1:exon

position:2979048:1
position: 2979048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2979295-2979420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2980473-2980703:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2980859-2980966:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2981220-2981387:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2982391-2982642:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2982738-2982809:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2983170-2983240:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2983494-2984943:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2985037-2987899:1:exon

SOGA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: SOGA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SOGA1 isoform X2
translation: MLEMRDVYMEEDVYQLQELRQQLDQASKTCRILQYRLRKAERRSLRVAQTGQVDGELIHSLEQDVKVAKDVSVRLHNELEAVEKKRIRLEEENEDLRQRLIETELAKQVVQNEMDKLRENSLKKRGSRSIGKTEKKPSVQEDSADLKCQLHFAKEESALMCKKLTKLAKENDGMKEELLKYRSLYGDLDSSLSVEELADSPHSREAELKVHLKLVEEEANILSRRIVELEVENRGLRAEMDDMKGQGDRELPGQDARFLAGLAGCGDTGDTVAELRRHLQFVEEEAELLRRSLLELEDQNKLLLTELSKYKSEHDLDVTLSEDSCSVVSEPSQEELATAKVQISELSGKVKKLQYENRVLLSNLQRCDLASCQTTRPMLETDAEAGDSAQCIPTTGWRDGTGSSEADVLGGGKVPDGPAKLLKPKDLETLLGIRDQAVLVSKAINILISDANGFTSGLKACLDNECVGGLLGEAVGSGGESPSDAKLMNVLLMRLGVLQQDLGCFVRKVDHLTGSLKEHTDSFSFSGASSHDATKEGLQKEHASDFQQPDFRDADPYRMPHAKDTDPTQPRSYRTCRPEENDSYATEIKELQLVLSEANESLRGLQEQLSQERQLRKDEVDNFSQKICQLKEDHQKALLRREFELQSLNLQRRLEQKFWSQEKNLLVQESQQFRQSFLLLFMKLKWFLKRWRQGKMVHSEGEDFLEVNSMKELYLLLEEEELAPQQQADNKMCTGDTWTPNTPNECIKTLAEMKVTLQELCTELREERRGASELQQQFTKAKAAWEMERAELKCHIAQLESKAGKGITERALPDWKVALKREREEHQHLLAESYSAVMDLTKQLQISEKNWNQEKVELLARFKEEQQQAEQQAKDLQNKINQLQKGANPWALKHSEMEKHGSNWKEALNEKITDKETISEAEAKGTNLKRTKSVSSMSEFESLLDCSPYLPGKSTPGLGDHSRGKKASAAAQLLPNGIWDSASLPPSHCTYVNIEQPAPDSLAKEKLGISSWDYSRAHSLSGHDPAQKQMQRSYTAPDKTGIRIYYSPPVVRRLEAPLVHNKEGKIMIEPGFLFTMAKPKEPEESASAESTYSQWLCNFSKQQRELLDAGTVESAVPPVPHFPPSLHDLEISGNMSDDMKEITNCVRQAIRSSSLERKVKSTSSQTVGLTHVGTQTIQTVSVGLQTDLPRGSSMHSKSWSPRSSSLMSVRSKQISSSLDKVHSRIERPCCSPKYGSPKLQRRSSSKLDASKDRSLWNLHQSKQNGSAWARSTTTRDSPVLSNINDGLSSLFSVVEHAGSTESIWKLGCPESSRAKPEAPKYGLVQEFFRNVCGRAQSPTAPPEKKETPGEEGSKRAEHPGPATHHPAESISRSLNKKVLKQSSCEDPKPSSPGQGGKDAALRDPDLISAIASEDMACDCSSQSLTSCFARPSRSAVRHSPSKCKLHPMDPPRAEEKPGALSE
SIO_010081: SOGA1
subclass of: SO_0000673
so part of: SOGA1
location: join(2969597..2969794,2971322..2971480,2974375..2974437,2976867..2978087,2979045..2979164,2979295..2979420,2980473..2980703,2980859..2980966,2981220..2981387,2982391..2982642,2982738..2982809,2983170..2983240,2983494..2984943,2985037..2985186)
location: region:2969597-2985186:1
so has part: feature:2969597-2969794:1:exon
so has part: feature:2971322-2971480:1:exon
so has part: feature:2974375-2974437:1:exon
so has part: feature:2976867-2978087:1:exon
so has part: feature:2979045-2979164:1:exon
so has part: feature:2979295-2979420:1:exon
so has part: feature:2980473-2980703:1:exon
so has part: feature:2980859-2980966:1:exon
so has part: feature:2981220-2981387:1:exon
so has part: feature:2982391-2982642:1:exon
so has part: feature:2982738-2982809:1:exon
so has part: feature:2983170-2983240:1:exon
so has part: feature:2983494-2984943:1:exon
so has part: feature:2985037-2985186:1:exon

XP_030358380.1
type: Protein
SIO_000068: ncbiprotein

position:2969597:1
position: 2969597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2985186:1
position: 2985186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2969597-2969794:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2971322-2971480:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2974375-2974437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2976867-2978087:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2979045-2979164:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2979295-2979420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2980473-2980703:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2980859-2980966:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2981220-2981387:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2982391-2982642:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2982738-2982809:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2983170-2983240:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2983494-2984943:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2985037-2985186:1:exon

SOGA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: SOGA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SOGA1 isoform X1
translation: MLEMRDVYMEEDVYQLQELRQQLDQASKTCRILQYRLRKAERRSLRVAQTGQVDGELIHSLEQDVKVAKDVSVRLHNELEAVEKKRIRLEEENEDLRQRLIETELAKQVVQNEMDKLRENSLKKRGSRSIGKTEKKPSVQEDSADLKCQLHFAKEESALMCKKLTKLAKENDGMKEELLKYRSLYGDLDSSLSVEELADSPHSREAELKVHLKLVEEEANILSRRIVELEVENRGLRAEMDDMKGQGDRELPGQDARFLAGLAGCGDTGDTVAELRRHLQFVEEEAELLRRSLLELEDQNKLLLTELSKYKSEHDLDVTLSEDSCSVVSEPSQEELATAKVQISELSGKVKKLQYENRVLLSNLQRCDLASCQTTRPMLETDAEAGDSAQCIPTTGWRDGTGSSEADVLGGGKVPDGPAKLLKPKDLETLLGIRDQAVLVSKAINILISDANGFTSGLKACLDNECVGGLLGEAVGSGGESPSDAKLMNVLLMRLGVLQQDLGCFVRKVDHLTGSLKEHTDSFSFSGASSHDATKEGLQKEHASDFQPDFRDADPYRMPHAKDTDPTQPRSYRTCRPEENDSYATEIKELQLVLSEANESLRGLQEQLSQERQLRKDEVDNFSQKICQLKEDHQKALLRREFELQSLNLQRRLEQKFWSQEKNLLVQESQQFRQSFLLLFMKLKWFLKRWRQGKMVHSEGEDFLEVNSMKELYLLLEEEELAPQQQADNKMCTGDTWTPNTPNECIKTLAEMKVTLQELCTELREERRGASELQQQFTKAKAAWEMERAELKCHIAQLESKAGKGITERALPDWKVALKREREEHQHLLAESYSAVMDLTKQLQISEKNWNQEKVELLARFKEEQQQAEQQAKDLQNKINQLQKGANPWALKHSEMEKHGSNWKEALNEKITDKETISEAEAKGTNLKRTKSVSSMSEFESLLDCSPYLPGKSTPGLGDHSRGKKASAAAQLLPNGIWDSASLPPSHCTYVNIEQPAPDSLAKEKLGISSWDYSRAHSLSGHDPAQKQMQRSYTAPDKTGIRIYYSPPVVRRLEAPLVHNKEGKIMIEPGFLFTMAKPKEPEESASAESTYSQWLCNFSKQQRELLDAGTVESAVPPVPHFPPSLHDLEISGNMSDDMKEITNCVRQAIRSSSLERKVKSTSSQTVGLTHVGTQTIQTVSVGLQTDLPRGSSMHSKSWSPRSSSLMSVRSKQISSSLDKVHSRIERPCCSPKYGSPKLQRRSSSKLDASKDRSLWNLHQSKQNGSAWARSTTTRDSPVLSNINDGLSSLFSVVEHAGSTESIWKLGCPESSRAKPEAPKYGLVQEFFRNVCGRAQSPTAPPEKKETPGEEGSKRAEHPGPATHHPAESISRSLNKKVLKQSSCEDPKPSSPGQGGKDAALRDPDLISAIASEDMACDCSSQSLTSCFARPSRSAVRHSPSKCKLHPMDPPRAEEKPGALSE
SIO_010081: SOGA1
subclass of: SO_0000673
so part of: SOGA1
location: join(2969597..2969794,2971322..2971480,2974375..2974437,2976867..2978087,2979048..2979164,2979295..2979420,2980473..2980703,2980859..2980966,2981220..2981387,2982391..2982642,2982738..2982809,2983170..2983240,2983494..2984943,2985037..2985186)
location: region:2969597-2985186:1
so has part: feature:2969597-2969794:1:exon
so has part: feature:2971322-2971480:1:exon
so has part: feature:2974375-2974437:1:exon
so has part: feature:2976867-2978087:1:exon
so has part: feature:2979048-2979164:1:exon
so has part: feature:2979295-2979420:1:exon
so has part: feature:2980473-2980703:1:exon
so has part: feature:2980859-2980966:1:exon
so has part: feature:2981220-2981387:1:exon
so has part: feature:2982391-2982642:1:exon
so has part: feature:2982738-2982809:1:exon
so has part: feature:2983170-2983240:1:exon
so has part: feature:2983494-2984943:1:exon
so has part: feature:2985037-2985186:1:exon

XP_030358381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2969597-2969794:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2971322-2971480:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2974375-2974437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2976867-2978087:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2979048-2979164:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2979295-2979420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2980473-2980703:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2980859-2980966:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2981220-2981387:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2982391-2982642:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2982738-2982809:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2983170-2983240:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2983494-2984943:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2985037-2985186:1:exon

ACSS2
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: ACSS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2997481..3034372
location: region:2997481-3034372:1
so has part: feature:2997481-3034372:1:exon
subclass of: SO_0000010

115614970
type: Gene
SIO_000068: ncbigene

position:2997481:1
position: 2997481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3034372:1
position: 3034372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2997481-3034372:1:exon

ACSS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: ACSS2
product: acyl-CoA synthetase short chain family member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 159 long SRA reads, 19 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030502523.1
SIO_010081: ACSS2
subclass of: SO_0000673
so part of: ACSS2
location: join(2997481..2997853,2998109..2998304,3018673..3018764,3019601..3019704,3020003..3020075,3021329..3021404,3022989..3023103,3026551..3026688,3026917..3027087,3027897..3028030,3029049..3029181,3029609..3029665,3029888..3029968,3030734..3030842,3030957..3031025,3031678..3031854,3032556..3032630,3032819..3034372)
location: region:2997481-3034372:1
so has part: feature:2997481-2997853:1:exon
so has part: feature:2998109-2998304:1:exon
so has part: feature:3018673-3018764:1:exon
so has part: feature:3019601-3019704:1:exon
so has part: feature:3020003-3020075:1:exon
so has part: feature:3021329-3021404:1:exon
so has part: feature:3022989-3023103:1:exon
so has part: feature:3026551-3026688:1:exon
so has part: feature:3026917-3027087:1:exon
so has part: feature:3027897-3028030:1:exon
so has part: feature:3029049-3029181:1:exon
so has part: feature:3029609-3029665:1:exon
so has part: feature:3029888-3029968:1:exon
so has part: feature:3030734-3030842:1:exon
so has part: feature:3030957-3031025:1:exon
so has part: feature:3031678-3031854:1:exon
so has part: feature:3032556-3032630:1:exon
so has part: feature:3032819-3034372:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2997481-2997853:1:exon

position:2997853:1
position: 2997853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2998109-2998304:1:exon

position:2998109:1
position: 2998109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2998304:1
position: 2998304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3018673-3018764:1:exon

position:3018673:1
position: 3018673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3018764:1
position: 3018764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3019601-3019704:1:exon

position:3019601:1
position: 3019601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3019704:1
position: 3019704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3020003-3020075:1:exon

position:3020003:1
position: 3020003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3020075:1
position: 3020075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3021329-3021404:1:exon

position:3021329:1
position: 3021329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3021404:1
position: 3021404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3022989-3023103:1:exon

position:3022989:1
position: 3022989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3023103:1
position: 3023103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3026551-3026688:1:exon

position:3026551:1
position: 3026551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3026688:1
position: 3026688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3026917-3027087:1:exon

position:3026917:1
position: 3026917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3027087:1
position: 3027087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3027897-3028030:1:exon

position:3027897:1
position: 3027897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3028030:1
position: 3028030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3029049-3029181:1:exon

position:3029049:1
position: 3029049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3029181:1
position: 3029181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3029609-3029665:1:exon

position:3029609:1
position: 3029609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3029665:1
position: 3029665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3029888-3029968:1:exon

position:3029888:1
position: 3029888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3029968:1
position: 3029968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3030734-3030842:1:exon

position:3030734:1
position: 3030734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3030842:1
position: 3030842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3030957-3031025:1:exon

position:3030957:1
position: 3030957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3031025:1
position: 3031025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3031678-3031854:1:exon

position:3031678:1
position: 3031678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3031854:1
position: 3031854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3032556-3032630:1:exon

position:3032556:1
position: 3032556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3032630:1
position: 3032630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3032819-3034372:1:exon

position:3032819:1
position: 3032819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ACSS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: ACSS2
product: acyl-CoA synthetase short chain family member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 157 long SRA reads, 12 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030502522.1
SIO_010081: ACSS2
subclass of: SO_0000673
so part of: ACSS2
location: join(2997515..2997853,2998109..2998304,3018673..3018764,3019601..3019704,3020003..3020075,3021329..3021404,3022989..3023103,3024794..3024832,3026551..3026688,3026917..3027087,3027897..3028030,3029049..3029181,3029609..3029665,3029888..3029968,3030734..3030842,3030957..3031025,3031678..3031854,3032556..3032630,3032819..3034372)
location: region:2997515-3034372:1
so has part: feature:2997515-2997853:1:exon
so has part: feature:2998109-2998304:1:exon
so has part: feature:3018673-3018764:1:exon
so has part: feature:3019601-3019704:1:exon
so has part: feature:3020003-3020075:1:exon
so has part: feature:3021329-3021404:1:exon
so has part: feature:3022989-3023103:1:exon
so has part: feature:3024794-3024832:1:exon
so has part: feature:3026551-3026688:1:exon
so has part: feature:3026917-3027087:1:exon
so has part: feature:3027897-3028030:1:exon
so has part: feature:3029049-3029181:1:exon
so has part: feature:3029609-3029665:1:exon
so has part: feature:3029888-3029968:1:exon
so has part: feature:3030734-3030842:1:exon
so has part: feature:3030957-3031025:1:exon
so has part: feature:3031678-3031854:1:exon
so has part: feature:3032556-3032630:1:exon
so has part: feature:3032819-3034372:1:exon

position:2997515:1
position: 2997515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2997515-2997853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2998109-2998304:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3018673-3018764:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3019601-3019704:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3020003-3020075:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3021329-3021404:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3022989-3023103:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3024794-3024832:1:exon

position:3024794:1
position: 3024794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3024832:1
position: 3024832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3026551-3026688:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3026917-3027087:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3027897-3028030:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3029049-3029181:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3029609-3029665:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3029888-3029968:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3030734-3030842:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3030957-3031025:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3031678-3031854:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3032556-3032630:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3032819-3034372:1:exon

ACSS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: ACSS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acetyl-coenzyme A synthetase, cytoplasmic isoform X1
translation: MGQEQARIFHPRPEWLPAAHVPSLSQYERLYQRSVEDPHAFWGDIAKEFYWKTPYTGPFLNYNFDVTKGKVFIEWMKGATTNICYNVLDRNVNEKKLGDKIAFYWEGNEPEDSMKITYKELLHKVCQFANVLRSQGVKKEDRVSIYMPMILELVVAMLACARIGALHTIVFAGFSADSLCERIIDGGCCLLVTADAFYRGDKLINLKQIADEALQKCKDRGCPLKKCIVVKHLGREELAVAGTCSKSPPLKRLCHDVQGKQTESSQRFHPKIPWTPGRDMWWHEVMSGASTDCEPEWCDSEDKLFILYTSGSTGKPKGVLHTVGGYMLFAATSFKYVFDYQPEDVYWCTADIGWITGHSYVTYGPLANGATSVIFEGVPTYPDVGRMWSIVDKYKVTKFYTAPTAIRLLMKHGEEPVRKHSRKSLKVLGSVGEPINPEAWLWYYRVVGEERCPIVDTFWQTETGGHMLTPLPGATPLKPGSAAFPFFGVVPAILNESGEELEGEAEGYLVFKQPWPGMMRTLYGNHPHFEATYFKKFPGYYVTGDGCKRDKDGYYWITGRIDDMLNISGHLLSTSEVESALLEHPAVSESAVVSHPHSLKGECLYCFVSLRVGYEFTKSLEDELRKQVRDKIGPIATPDYIQYAPGLPKTRSGKITRRILRKIARDDHDLGDTSTLADPSIIDQLFSNRCNTKQ
SIO_010081: ACSS2
subclass of: SO_0000673
so part of: ACSS2
location: join(2997736..2997853,2998109..2998304,3018673..3018764,3019601..3019704,3020003..3020075,3021329..3021404,3022989..3023103,3024794..3024832,3026551..3026688,3026917..3027087,3027897..3028030,3029049..3029181,3029609..3029665,3029888..3029968,3030734..3030842,3030957..3031025,3031678..3031854,3032556..3032630,3032819..3032946)
location: region:2997736-3032946:1
so has part: feature:2997736-2997853:1:exon
so has part: feature:2998109-2998304:1:exon
so has part: feature:3018673-3018764:1:exon
so has part: feature:3019601-3019704:1:exon
so has part: feature:3020003-3020075:1:exon
so has part: feature:3021329-3021404:1:exon
so has part: feature:3022989-3023103:1:exon
so has part: feature:3024794-3024832:1:exon
so has part: feature:3026551-3026688:1:exon
so has part: feature:3026917-3027087:1:exon
so has part: feature:3027897-3028030:1:exon
so has part: feature:3029049-3029181:1:exon
so has part: feature:3029609-3029665:1:exon
so has part: feature:3029888-3029968:1:exon
so has part: feature:3030734-3030842:1:exon
so has part: feature:3030957-3031025:1:exon
so has part: feature:3031678-3031854:1:exon
so has part: feature:3032556-3032630:1:exon
so has part: feature:3032819-3032946:1:exon

XP_030358382.1
type: Protein
SIO_000068: ncbiprotein

position:2997736:1
position: 2997736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3032946:1
position: 3032946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2997736-2997853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2998109-2998304:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3018673-3018764:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3019601-3019704:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3020003-3020075:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3021329-3021404:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3022989-3023103:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3024794-3024832:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3026551-3026688:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3026917-3027087:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3027897-3028030:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3029049-3029181:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3029609-3029665:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3029888-3029968:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3030734-3030842:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3030957-3031025:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3031678-3031854:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3032556-3032630:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3032819-3032946:1:exon

ACSS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: ACSS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acetyl-coenzyme A synthetase, cytoplasmic isoform X2
translation: MGQEQARIFHPRPEWLPAAHVPSLSQYERLYQRSVEDPHAFWGDIAKEFYWKTPYTGPFLNYNFDVTKGKVFIEWMKGATTNICYNVLDRNVNEKKLGDKIAFYWEGNEPEDSMKITYKELLHKVCQFANVLRSQGVKKEDRVSIYMPMILELVVAMLACARIGALHTIVFAGFSADSLCERIIDGGCCLLVTADAFYRGDKLINLKQIADEALQKCKDRGCPLKKCIVVKHLGREELAVAGTCSKSPPLKRLCHDVQIPWTPGRDMWWHEVMSGASTDCEPEWCDSEDKLFILYTSGSTGKPKGVLHTVGGYMLFAATSFKYVFDYQPEDVYWCTADIGWITGHSYVTYGPLANGATSVIFEGVPTYPDVGRMWSIVDKYKVTKFYTAPTAIRLLMKHGEEPVRKHSRKSLKVLGSVGEPINPEAWLWYYRVVGEERCPIVDTFWQTETGGHMLTPLPGATPLKPGSAAFPFFGVVPAILNESGEELEGEAEGYLVFKQPWPGMMRTLYGNHPHFEATYFKKFPGYYVTGDGCKRDKDGYYWITGRIDDMLNISGHLLSTSEVESALLEHPAVSESAVVSHPHSLKGECLYCFVSLRVGYEFTKSLEDELRKQVRDKIGPIATPDYIQYAPGLPKTRSGKITRRILRKIARDDHDLGDTSTLADPSIIDQLFSNRCNTKQ
SIO_010081: ACSS2
subclass of: SO_0000673
so part of: ACSS2
location: join(2997736..2997853,2998109..2998304,3018673..3018764,3019601..3019704,3020003..3020075,3021329..3021404,3022989..3023103,3026551..3026688,3026917..3027087,3027897..3028030,3029049..3029181,3029609..3029665,3029888..3029968,3030734..3030842,3030957..3031025,3031678..3031854,3032556..3032630,3032819..3032946)
location: region:2997736-3032946:1
so has part: feature:2997736-2997853:1:exon
so has part: feature:2998109-2998304:1:exon
so has part: feature:3018673-3018764:1:exon
so has part: feature:3019601-3019704:1:exon
so has part: feature:3020003-3020075:1:exon
so has part: feature:3021329-3021404:1:exon
so has part: feature:3022989-3023103:1:exon
so has part: feature:3026551-3026688:1:exon
so has part: feature:3026917-3027087:1:exon
so has part: feature:3027897-3028030:1:exon
so has part: feature:3029049-3029181:1:exon
so has part: feature:3029609-3029665:1:exon
so has part: feature:3029888-3029968:1:exon
so has part: feature:3030734-3030842:1:exon
so has part: feature:3030957-3031025:1:exon
so has part: feature:3031678-3031854:1:exon
so has part: feature:3032556-3032630:1:exon
so has part: feature:3032819-3032946:1:exon

XP_030358383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2997736-2997853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2998109-2998304:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3018673-3018764:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3019601-3019704:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3020003-3020075:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3021329-3021404:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3022989-3023103:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3026551-3026688:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3026917-3027087:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3027897-3028030:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3029049-3029181:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3029609-3029665:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3029888-3029968:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3030734-3030842:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3030957-3031025:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3031678-3031854:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3032556-3032630:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3032819-3032946:1:exon

GSS
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: GSS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3035117..3046318)
location: region:3035117-3046318:-1
so has part: feature:3035117-3046318:-1:exon
subclass of: SO_0000010

115614971
type: Gene
SIO_000068: ncbigene

position:3035117:-1
position: 3035117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3046318:-1
position: 3046318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3035117-3046318:-1:exon

GSS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: GSS
product: glutathione synthetase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 272 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030502524.1
SIO_010081: GSS
subclass of: SO_0000673
so part of: GSS
location: complement(join(3035117..3036506,3037424..3037613,3038165..3038246,3038422..3038616,3039201..3039267,3040494..3040571,3041744..3041824,3042256..3042372,3042514..3042653,3043186..3043261,3044571..3044716,3045879..3046015,3046266..3046318))
location: region:3035117-3046318:-1
so has part: feature:3046266-3046318:-1:exon
so has part: feature:3045879-3046015:-1:exon
so has part: feature:3044571-3044716:-1:exon
so has part: feature:3043186-3043261:-1:exon
so has part: feature:3042514-3042653:-1:exon
so has part: feature:3042256-3042372:-1:exon
so has part: feature:3041744-3041824:-1:exon
so has part: feature:3040494-3040571:-1:exon
so has part: feature:3039201-3039267:-1:exon
so has part: feature:3038422-3038616:-1:exon
so has part: feature:3038165-3038246:-1:exon
so has part: feature:3037424-3037613:-1:exon
so has part: feature:3035117-3036506:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3046266-3046318:-1:exon

position:3046266:-1
position: 3046266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3045879-3046015:-1:exon

position:3045879:-1
position: 3045879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3046015:-1
position: 3046015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3044571-3044716:-1:exon

position:3044571:-1
position: 3044571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3044716:-1
position: 3044716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3043186-3043261:-1:exon

position:3043186:-1
position: 3043186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3043261:-1
position: 3043261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3042514-3042653:-1:exon

position:3042514:-1
position: 3042514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3042653:-1
position: 3042653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3042256-3042372:-1:exon

position:3042256:-1
position: 3042256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3042372:-1
position: 3042372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3041744-3041824:-1:exon

position:3041744:-1
position: 3041744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3041824:-1
position: 3041824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3040494-3040571:-1:exon

position:3040494:-1
position: 3040494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3040571:-1
position: 3040571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3039201-3039267:-1:exon

position:3039201:-1
position: 3039201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3039267:-1
position: 3039267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3038422-3038616:-1:exon

position:3038422:-1
position: 3038422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3038616:-1
position: 3038616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3038165-3038246:-1:exon

position:3038165:-1
position: 3038165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3038246:-1
position: 3038246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3037424-3037613:-1:exon

position:3037424:-1
position: 3037424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3037613:-1
position: 3037613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3035117-3036506:-1:exon

position:3036506:-1
position: 3036506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GSS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: GSS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutathione synthetase
translation: MAAPWEDVLRDRPAIREAAAVAVDAALLEGVLMRTEGQPNASDVVNFAPFTLLPSAVPSALFEQAYAVQQDFNMLVDAISQNKEFLEHTLASTIKVDDFTARLFRIHTQVLEEGLAQSVFLGINRSDYMFDCGVDGTPALKQIEINTIAASFGGLTSRTVAVHGQVLKVLGKPQEASRLLPNNPSRGLALGIAKAWELYGSPSAVVMFLVEEVQRNIFDQRCVENELWNRNIRVIRKRFRDVFEKGSLDEARRLYMDGQEVAVVYYREGYVPSNYDQQNWEARLLLERSRAVKCPDIATQLAGTKKVQQELSRPGTLERLLPGHAEAVARIRATFAGLYSLDTGAEGDRVAAMAIADPDRFVLKPQREGGGNNLYGEELRQVLEKIRDSPERNSYILMDKIKPRPARNYLLRAHSPLQVSECISELGIFGVYIRRGSELVLNEAAGHLLRTKAVEHADGGVAAGVAVLDTPFLV
SIO_010081: GSS
subclass of: SO_0000673
so part of: GSS
location: complement(join(3036383..3036506,3037424..3037613,3038165..3038246,3038422..3038616,3039201..3039267,3040494..3040571,3041744..3041824,3042256..3042372,3042514..3042653,3043186..3043261,3044571..3044716,3045879..3046007))
location: region:3036383-3046007:-1
so has part: feature:3045879-3046007:-1:exon
so has part: feature:3044571-3044716:-1:exon
so has part: feature:3043186-3043261:-1:exon
so has part: feature:3042514-3042653:-1:exon
so has part: feature:3042256-3042372:-1:exon
so has part: feature:3041744-3041824:-1:exon
so has part: feature:3040494-3040571:-1:exon
so has part: feature:3039201-3039267:-1:exon
so has part: feature:3038422-3038616:-1:exon
so has part: feature:3038165-3038246:-1:exon
so has part: feature:3037424-3037613:-1:exon
so has part: feature:3036383-3036506:-1:exon

XP_030358384.1
type: Protein
SIO_000068: ncbiprotein

position:3036383:-1
position: 3036383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3046007:-1
position: 3046007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3045879-3046007:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3044571-3044716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3043186-3043261:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3042514-3042653:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3042256-3042372:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3041744-3041824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3040494-3040571:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3039201-3039267:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3038422-3038616:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3038165-3038246:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3037424-3037613:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3036383-3036506:-1:exon

MYH7B
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: MYH7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3058189..3084789
location: region:3058189-3084789:1
so has part: feature:3058189-3084789:1:exon
subclass of: SO_0000010

115615367
type: Gene
SIO_000068: ncbigene

position:3058189:1
position: 3058189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3084789:1
position: 3084789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3058189-3084789:1:exon

MYH7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: MYH7B
product: myosin heavy chain 7B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 24 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030503452.1
SIO_010081: MYH7B
subclass of: SO_0000673
so part of: MYH7B
location: join(3058189..3058285,3059035..3059138,3060806..3060949,3061054..3061210,3061314..3061341,3062353..3062449,3063321..3063344,3065180..3065272,3066308..3066371,3066478..3066576,3067579..3067682,3068203..3068341,3069573..3069691,3069833..3069982,3070301..3070471,3071167..3071346,3071431..3071563,3072052..3072128,3073538..3073625,3074084..3074201,3074757..3074880,3075383..3075519,3075937..3076192,3076749..3076991,3077168..3077344,3077664..3077809,3078122..3078212,3078970..3079359,3079916..3080042,3080488..3080606,3080824..3081020,3081189..3081538,3082014..3082138,3082383..3082498,3082582..3082774,3082866..3083069,3083158..3083283,3083392..3083562,3083839..3083943,3084325..3084420,3084526..3084663,3084781..3084789)
location: region:3058189-3084789:1
so has part: feature:3058189-3058285:1:exon
so has part: feature:3059035-3059138:1:exon
so has part: feature:3060806-3060949:1:exon
so has part: feature:3061054-3061210:1:exon
so has part: feature:3061314-3061341:1:exon
so has part: feature:3062353-3062449:1:exon
so has part: feature:3063321-3063344:1:exon
so has part: feature:3065180-3065272:1:exon
so has part: feature:3066308-3066371:1:exon
so has part: feature:3066478-3066576:1:exon
so has part: feature:3067579-3067682:1:exon
so has part: feature:3068203-3068341:1:exon
so has part: feature:3069573-3069691:1:exon
so has part: feature:3069833-3069982:1:exon
so has part: feature:3070301-3070471:1:exon
so has part: feature:3071167-3071346:1:exon
so has part: feature:3071431-3071563:1:exon
so has part: feature:3072052-3072128:1:exon
so has part: feature:3073538-3073625:1:exon
so has part: feature:3074084-3074201:1:exon
so has part: feature:3074757-3074880:1:exon
so has part: feature:3075383-3075519:1:exon
so has part: feature:3075937-3076192:1:exon
so has part: feature:3076749-3076991:1:exon
so has part: feature:3077168-3077344:1:exon
so has part: feature:3077664-3077809:1:exon
so has part: feature:3078122-3078212:1:exon
so has part: feature:3078970-3079359:1:exon
so has part: feature:3079916-3080042:1:exon
so has part: feature:3080488-3080606:1:exon
so has part: feature:3080824-3081020:1:exon
so has part: feature:3081189-3081538:1:exon
so has part: feature:3082014-3082138:1:exon
so has part: feature:3082383-3082498:1:exon
so has part: feature:3082582-3082774:1:exon
so has part: feature:3082866-3083069:1:exon
so has part: feature:3083158-3083283:1:exon
so has part: feature:3083392-3083562:1:exon
so has part: feature:3083839-3083943:1:exon
so has part: feature:3084325-3084420:1:exon
so has part: feature:3084526-3084663:1:exon
so has part: feature:3084781-3084789:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3058189-3058285:1:exon

position:3058285:1
position: 3058285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3059035-3059138:1:exon

position:3059035:1
position: 3059035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3059138:1
position: 3059138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3060806-3060949:1:exon

position:3060806:1
position: 3060806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3060949:1
position: 3060949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3061054-3061210:1:exon

position:3061054:1
position: 3061054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3061210:1
position: 3061210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3061314-3061341:1:exon

position:3061314:1
position: 3061314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3061341:1
position: 3061341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3062353-3062449:1:exon

position:3062353:1
position: 3062353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3062449:1
position: 3062449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3063321-3063344:1:exon

position:3063321:1
position: 3063321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3063344:1
position: 3063344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3065180-3065272:1:exon

position:3065180:1
position: 3065180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3065272:1
position: 3065272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3066308-3066371:1:exon

position:3066308:1
position: 3066308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3066371:1
position: 3066371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3066478-3066576:1:exon

position:3066478:1
position: 3066478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3066576:1
position: 3066576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3067579-3067682:1:exon

position:3067579:1
position: 3067579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3067682:1
position: 3067682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3068203-3068341:1:exon

position:3068203:1
position: 3068203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3068341:1
position: 3068341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3069573-3069691:1:exon

position:3069573:1
position: 3069573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3069691:1
position: 3069691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3069833-3069982:1:exon

position:3069833:1
position: 3069833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3069982:1
position: 3069982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3070301-3070471:1:exon

position:3070301:1
position: 3070301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3070471:1
position: 3070471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3071167-3071346:1:exon

position:3071167:1
position: 3071167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3071346:1
position: 3071346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3071431-3071563:1:exon

position:3071431:1
position: 3071431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3071563:1
position: 3071563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3072052-3072128:1:exon

position:3072052:1
position: 3072052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3072128:1
position: 3072128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3073538-3073625:1:exon

position:3073538:1
position: 3073538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3073625:1
position: 3073625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3074084-3074201:1:exon

position:3074084:1
position: 3074084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3074201:1
position: 3074201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3074757-3074880:1:exon

position:3074757:1
position: 3074757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3074880:1
position: 3074880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3075383-3075519:1:exon

position:3075383:1
position: 3075383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3075519:1
position: 3075519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3075937-3076192:1:exon

position:3075937:1
position: 3075937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3076192:1
position: 3076192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3076749-3076991:1:exon

position:3076749:1
position: 3076749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3076991:1
position: 3076991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3077168-3077344:1:exon

position:3077168:1
position: 3077168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3077344:1
position: 3077344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3077664-3077809:1:exon

position:3077664:1
position: 3077664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3077809:1
position: 3077809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3078122-3078212:1:exon

position:3078122:1
position: 3078122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3078212:1
position: 3078212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3078970-3079359:1:exon

position:3078970:1
position: 3078970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3079359:1
position: 3079359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:3079916-3080042:1:exon

position:3079916:1
position: 3079916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3080042:1
position: 3080042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:3080488-3080606:1:exon

position:3080488:1
position: 3080488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3080606:1
position: 3080606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:3080824-3081020:1:exon

position:3080824:1
position: 3080824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3081020:1
position: 3081020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:3081189-3081538:1:exon

position:3081189:1
position: 3081189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3081538:1
position: 3081538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:3082014-3082138:1:exon

position:3082014:1
position: 3082014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3082138:1
position: 3082138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:3082383-3082498:1:exon

position:3082383:1
position: 3082383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3082498:1
position: 3082498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:3082582-3082774:1:exon

position:3082582:1
position: 3082582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3082774:1
position: 3082774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:3082866-3083069:1:exon

position:3082866:1
position: 3082866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3083069:1
position: 3083069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:3083158-3083283:1:exon

position:3083158:1
position: 3083158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3083283:1
position: 3083283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:3083392-3083562:1:exon

position:3083392:1
position: 3083392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3083562:1
position: 3083562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:3083839-3083943:1:exon

position:3083839:1
position: 3083839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3083943:1
position: 3083943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:3084325-3084420:1:exon

position:3084325:1
position: 3084325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3084420:1
position: 3084420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:3084526-3084663:1:exon

position:3084526:1
position: 3084526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3084663:1
position: 3084663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:3084781-3084789:1:exon

position:3084781:1
position: 3084781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MYH7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: MYH7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin-7B
translation: MSMLDMSEFGEAAEYLRKSYTEQLKLQTIPFDGKKRSWIPDEKEAYIEVEIKEIAGGKVTVETKNKETRVVKEDELQAMNPPKFDMIEDMAMLTHLNEASVLHNLKRRYAHWMIYTYSGLFCVTINPYKWLPVYTAPVVAVYKGKRRTEAPPHIYAIADNAYNDMLRNRENQSMLITGESGAGKTVNTKRVIQYFAIVAALGDTPGKKLAAVATKTGGTLEDQIIEANPAMEAFGNAKTIRNDNSSRFGKFIRIHFGPSGKLASADIDIYLLEKSRVIFQQPKERSYHIYYQILSGKKPELQDMLLLSLNPYDYHFCSQGVTTVDNLDDGEELMATDHAMDILGFSNDEKYGSYKIVGAIMHFGNMKFKQKQREEQAEADGTESADKAAYLMGISSADLIKGLLHPRVKVGNEYVTKGQNVEQVVYAVGALAKATYDRMFKWLVARINKTLDTKLARQFFIGVLDIAGFEIFEFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWVFIDFGLDLQACIDLIEKPLGILSILEEECMFPKASDMSFKAKLYDNHLGKSPNFQKPRPDKKRKYEAHFELVHYAGVVPYNIIGWLDKNKDPLNETVVAVFQKSQNKLLASLYENYVGSSSEEPHKPGTKEKRKKAASFQTVSQLHKENLNKLMTNLRSTQPHFVRCIIPNETKTPGAMDAFLVLHQLRCNGVLEGIRICRKGFPNRILYADFKQRYRILNPTAIPDDKFVDSRKATEKLLSSLELDHSQYKFGHTKVFFKAGLLGLLEEMRDERLAKILTMLQARIRGHLMRIEYQKIISRREALYTIQWNIRAFNAVKNWSWMKLFFKIKPLLKSAQTEKEMANLKEELQKLKEALEKSEAKRKELEEKQVSMIQEKNDLTLQLQAEQDNLADAEERCDLLIKSKIQLEAKVKELTERLEDEEEMNSDLTAKKRKLEDECAELKKDIDDLEITLAKVEKEKHATENKVKNLIEEMAALDEIIAKLTKEKKALQEAHQQALDDLQAEEDKVNTLTKAKVKLEQQVDDLESSLEQEKKVRMDLERAKRKLEGDLKLTQESVMDLENDKQQLEEKLKKKDFEMSQLNSRIEDGQVTEAQLQKKIKELQARIEELEEELEAERAARAKVEKQRAEVSRELEELSERLEEAGGATATQLEMNKKREAEFLKLRRDLEEATLQHESTAAALRKKHADSVAELGEQIDNLQRVKQKLEKEKSELKMEVDDLSSNIEYLTKNKANAEKLCRTYEDQLNEAKSKVDELQRQLNDVSTQRGRLQTENGELSRLLEEKESFINQLSRGKTSFTQNIEELKRQLDEETKSKNALAHALQASRHDCDLLREQYEEEVEAKSELQRNLSKANAEVAQWRTKYETDAIQRTEELEEAKKKLATRLQEAEEAVEAAHAKCSSLEKTKHRLQTEIEDLSVDLERANSACAALDKKQRNFDRILAEWKQKYEETQAELEASQKESRSLSTELFKLKNAYEESLDNLETLKRENKNLQEEIADLTDQISMSGKTIHELEKLKKALESEKSDIQAALEEAEGALEHEESKTLRIQLELNQIKADVDRKLAEKDEEFENLRRNHQRAMDSMQATLDAEARAKNEAVRLRKKMEGDLNEMEIQLSHANRQAAEFQKLVRQLQAQMKDLQIELDDTQRHNDDLKEQAAALERRNNLLLAEVEELRAALEQAERSRKLAEQELLEATERVNLLHSQNTGLINQKKKLEADISQLSSEVEDAVQECRNAEDKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQMRLDEAEQIALKGGKKQIQKLEARVRELEGELDTEQKKMAEAQKGIRKYERRIKELSYQAEEDRKNLARMQDLIDKLQSKVKSYKRQFEEAEQQANSNLVKYRKVQHELDDAEERADIAETQVNKLRARTREVIASKHE
SIO_010081: MYH7B
subclass of: SO_0000673
so part of: MYH7B
location: join(3058189..3058285,3059035..3059138,3060806..3060949,3061054..3061210,3061314..3061341,3062353..3062449,3063321..3063344,3065180..3065272,3066308..3066371,3066478..3066576,3067579..3067682,3068203..3068341,3069573..3069691,3069833..3069982,3070301..3070471,3071167..3071346,3071431..3071563,3072052..3072128,3073538..3073625,3074084..3074201,3074757..3074880,3075383..3075519,3075937..3076192,3076749..3076991,3077168..3077344,3077664..3077809,3078122..3078212,3078970..3079359,3079916..3080042,3080488..3080606,3080824..3081020,3081189..3081538,3082014..3082138,3082383..3082498,3082582..3082774,3082866..3083069,3083158..3083283,3083392..3083562,3083839..3083943,3084325..3084420,3084526..3084663,3084781..3084789)
location: region:3058189-3084789:1
so has part: feature:3058189-3058285:1:exon
so has part: feature:3059035-3059138:1:exon
so has part: feature:3060806-3060949:1:exon
so has part: feature:3061054-3061210:1:exon
so has part: feature:3061314-3061341:1:exon
so has part: feature:3062353-3062449:1:exon
so has part: feature:3063321-3063344:1:exon
so has part: feature:3065180-3065272:1:exon
so has part: feature:3066308-3066371:1:exon
so has part: feature:3066478-3066576:1:exon
so has part: feature:3067579-3067682:1:exon
so has part: feature:3068203-3068341:1:exon
so has part: feature:3069573-3069691:1:exon
so has part: feature:3069833-3069982:1:exon
so has part: feature:3070301-3070471:1:exon
so has part: feature:3071167-3071346:1:exon
so has part: feature:3071431-3071563:1:exon
so has part: feature:3072052-3072128:1:exon
so has part: feature:3073538-3073625:1:exon
so has part: feature:3074084-3074201:1:exon
so has part: feature:3074757-3074880:1:exon
so has part: feature:3075383-3075519:1:exon
so has part: feature:3075937-3076192:1:exon
so has part: feature:3076749-3076991:1:exon
so has part: feature:3077168-3077344:1:exon
so has part: feature:3077664-3077809:1:exon
so has part: feature:3078122-3078212:1:exon
so has part: feature:3078970-3079359:1:exon
so has part: feature:3079916-3080042:1:exon
so has part: feature:3080488-3080606:1:exon
so has part: feature:3080824-3081020:1:exon
so has part: feature:3081189-3081538:1:exon
so has part: feature:3082014-3082138:1:exon
so has part: feature:3082383-3082498:1:exon
so has part: feature:3082582-3082774:1:exon
so has part: feature:3082866-3083069:1:exon
so has part: feature:3083158-3083283:1:exon
so has part: feature:3083392-3083562:1:exon
so has part: feature:3083839-3083943:1:exon
so has part: feature:3084325-3084420:1:exon
so has part: feature:3084526-3084663:1:exon
so has part: feature:3084781-3084789:1:exon

XP_030359312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3058189-3058285:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3059035-3059138:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3060806-3060949:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3061054-3061210:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3061314-3061341:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3062353-3062449:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3063321-3063344:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3065180-3065272:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3066308-3066371:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3066478-3066576:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3067579-3067682:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3068203-3068341:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3069573-3069691:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3069833-3069982:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3070301-3070471:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3071167-3071346:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3071431-3071563:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3072052-3072128:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3073538-3073625:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3074084-3074201:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3074757-3074880:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3075383-3075519:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3075937-3076192:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3076749-3076991:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3077168-3077344:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3077664-3077809:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3078122-3078212:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3078970-3079359:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3079916-3080042:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3080488-3080606:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3080824-3081020:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:3081189-3081538:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:3082014-3082138:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:3082383-3082498:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:3082582-3082774:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:3082866-3083069:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:3083158-3083283:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:3083392-3083562:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:3083839-3083943:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:3084325-3084420:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:3084526-3084663:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:3084781-3084789:1:exon

TRPC4AP
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: TRPC4AP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3086097..3128562)
location: region:3086097-3128562:-1
so has part: feature:3086097-3128562:-1:exon
subclass of: SO_0000010

115614972
type: Gene
SIO_000068: ncbigene

position:3086097:-1
position: 3086097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3128562:-1
position: 3128562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3086097-3128562:-1:exon

TRPC4AP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: TRPC4AP
product: transient receptor potential cation channel subfamily C member 4 associated protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 30 ESTs, 213 long SRA reads, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030502525.1
SIO_010081: TRPC4AP
subclass of: SO_0000673
so part of: TRPC4AP
location: complement(join(3086097..3088060,3089030..3089236,3089480..3089592,3090084..3090192,3091749..3091889,3092314..3092404,3092722..3092805,3094756..3094857,3103672..3103730,3104302..3104433,3106303..3106445,3108378..3108572,3110488..3110689,3111179..3111307,3112843..3112898,3114034..3114091,3117010..3117126,3117364..3117492,3128303..3128562))
location: region:3086097-3128562:-1
so has part: feature:3128303-3128562:-1:exon
so has part: feature:3117364-3117492:-1:exon
so has part: feature:3117010-3117126:-1:exon
so has part: feature:3114034-3114091:-1:exon
so has part: feature:3112843-3112898:-1:exon
so has part: feature:3111179-3111307:-1:exon
so has part: feature:3110488-3110689:-1:exon
so has part: feature:3108378-3108572:-1:exon
so has part: feature:3106303-3106445:-1:exon
so has part: feature:3104302-3104433:-1:exon
so has part: feature:3103672-3103730:-1:exon
so has part: feature:3094756-3094857:-1:exon
so has part: feature:3092722-3092805:-1:exon
so has part: feature:3092314-3092404:-1:exon
so has part: feature:3091749-3091889:-1:exon
so has part: feature:3090084-3090192:-1:exon
so has part: feature:3089480-3089592:-1:exon
so has part: feature:3089030-3089236:-1:exon
so has part: feature:3086097-3088060:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3128303-3128562:-1:exon

position:3128303:-1
position: 3128303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3117364-3117492:-1:exon

position:3117364:-1
position: 3117364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3117492:-1
position: 3117492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3117010-3117126:-1:exon

position:3117010:-1
position: 3117010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3117126:-1
position: 3117126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3114034-3114091:-1:exon

position:3114034:-1
position: 3114034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3114091:-1
position: 3114091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3112843-3112898:-1:exon

position:3112843:-1
position: 3112843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3112898:-1
position: 3112898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3111179-3111307:-1:exon

position:3111179:-1
position: 3111179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3111307:-1
position: 3111307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3110488-3110689:-1:exon

position:3110488:-1
position: 3110488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3110689:-1
position: 3110689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3108378-3108572:-1:exon

position:3108378:-1
position: 3108378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3108572:-1
position: 3108572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3106303-3106445:-1:exon

position:3106303:-1
position: 3106303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3106445:-1
position: 3106445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3104302-3104433:-1:exon

position:3104302:-1
position: 3104302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3104433:-1
position: 3104433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3103672-3103730:-1:exon

position:3103672:-1
position: 3103672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3103730:-1
position: 3103730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3094756-3094857:-1:exon

position:3094756:-1
position: 3094756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3094857:-1
position: 3094857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3092722-3092805:-1:exon

position:3092722:-1
position: 3092722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3092805:-1
position: 3092805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3092314-3092404:-1:exon

position:3092314:-1
position: 3092314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3092404:-1
position: 3092404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3091749-3091889:-1:exon

position:3091749:-1
position: 3091749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3091889:-1
position: 3091889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3090084-3090192:-1:exon

position:3090084:-1
position: 3090084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3090192:-1
position: 3090192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3089480-3089592:-1:exon

position:3089480:-1
position: 3089480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3089592:-1
position: 3089592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3089030-3089236:-1:exon

position:3089030:-1
position: 3089030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3089236:-1
position: 3089236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3086097-3088060:-1:exon

position:3088060:-1
position: 3088060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRPC4AP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: TRPC4AP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short transient receptor potential channel 4-associated protein
translation: MAAAGGTGPGRARRGARAAPTNILQQLRHGQLSGCGLTRGTQITEALLKERDKQAKWSGIPLLLQKLYEHSHPNSDFSQCQSILKEISPLLSMEAVASVTEDKKAAQESTFPNTYTFDLFGGVDLLVEILMRPTLITQKKKQKISDDLIKDCLSILYNTCICTEGVTRRLAERNDFVLFLFTLMTNKKTFLQTATLIEDILGVKKEMIQLDDIPNLASLVSSFDQQQLANFCRILAVTISELDPGSDDKHTLLAKNAQQKKNLGPSRAEINQATLLNIPGFIERLCKLATRKVSETTGTSSFLQELEEWYTWLGLDNALVLDTLMRVANEEAEQSSTESSDESGLANTSTRAQLPQPMKIMHEIMYKLEVLYVLCVLLMGRQRNQVHKMIAEFKLIPGLNNLFDKLIWRKHSASALVLHGHNQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNSQELNELSAISHKANIPEVDAVVNTDRSLVCDGKRGLLTRLLQVMKKEPAESSFRFWQARAVESFLRGTTSYADQMFLLKRGLLEHILYCIVDSECKSRDVLQSYFDLLGELMKFNIDAFKRFNKYINTDEKFQIFLNQINSSLVDSNMLVRCITLSLDRFENQSDAKVAEVLSECRLLSYMSQMSMRMSFLFRLINIIHVQTLTQENVSCLNTSLVILMLARRKEKLPFYLHTLQQMEYTEKYPGFILNNFHSLLRFWQQHYLNKDKDSTCLENSSCISFTYWKETVSILLSPDRTSPCAIVSYIDEAYMDIDRDFAEE
SIO_010081: TRPC4AP
subclass of: SO_0000673
so part of: TRPC4AP
location: complement(join(3087923..3088060,3089030..3089236,3089480..3089592,3090084..3090192,3091749..3091889,3092314..3092404,3092722..3092805,3094756..3094857,3103672..3103730,3104302..3104433,3106303..3106445,3108378..3108572,3110488..3110689,3111179..3111307,3112843..3112898,3114034..3114091,3117010..3117126,3117364..3117492,3128303..3128428))
location: region:3087923-3128428:-1
so has part: feature:3128303-3128428:-1:exon
so has part: feature:3117364-3117492:-1:exon
so has part: feature:3117010-3117126:-1:exon
so has part: feature:3114034-3114091:-1:exon
so has part: feature:3112843-3112898:-1:exon
so has part: feature:3111179-3111307:-1:exon
so has part: feature:3110488-3110689:-1:exon
so has part: feature:3108378-3108572:-1:exon
so has part: feature:3106303-3106445:-1:exon
so has part: feature:3104302-3104433:-1:exon
so has part: feature:3103672-3103730:-1:exon
so has part: feature:3094756-3094857:-1:exon
so has part: feature:3092722-3092805:-1:exon
so has part: feature:3092314-3092404:-1:exon
so has part: feature:3091749-3091889:-1:exon
so has part: feature:3090084-3090192:-1:exon
so has part: feature:3089480-3089592:-1:exon
so has part: feature:3089030-3089236:-1:exon
so has part: feature:3087923-3088060:-1:exon

XP_030358385.1
type: Protein
SIO_000068: ncbiprotein

position:3087923:-1
position: 3087923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3128428:-1
position: 3128428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3128303-3128428:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3117364-3117492:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3117010-3117126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3114034-3114091:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3112843-3112898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3111179-3111307:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3110488-3110689:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3108378-3108572:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3106303-3106445:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3104302-3104433:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3103672-3103730:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3094756-3094857:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3092722-3092805:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3092314-3092404:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3091749-3091889:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3090084-3090192:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3089480-3089592:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3089030-3089236:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3087923-3088060:-1:exon

LOC115614973
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115614973
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3095428..3095786)
location: region:3095428-3095786:-1
so has part: feature:3095428-3095786:-1:exon
subclass of: SO_0000011

115614973
type: Gene
SIO_000068: ncbigene

position:3095428:-1
position: 3095428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3095786:-1
position: 3095786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3095428-3095786:-1:exon

LOC115614973
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2489341
nc RNA class: lncRNA
gene: LOC115614973
product: uncharacterized LOC115614973
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003993914.1
SIO_010081: LOC115614973
subclass of: SO_0000673
so part of: LOC115614973
location: complement(join(3095428..3095613,3095709..3095786))
location: region:3095428-3095786:-1
so has part: feature:3095709-3095786:-1:exon
so has part: feature:3095428-3095613:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3095709-3095786:-1:exon

position:3095709:-1
position: 3095709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3095428-3095613:-1:exon

position:3095613:-1
position: 3095613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 3101987..3102059
location: region:3101987-3102059:1
so has part: feature:3101987-3102059:1:exon
subclass of: SO_0000663

115615439
type: Gene
SIO_000068: ncbigene

position:3101987:1
position: 3101987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3102059:1
position: 3102059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3101987-3102059:1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2489341
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:3102020..3102022,aa:Lys,seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: 3101987..3102059
location: region:3101987-3102059:1
so has part: feature:3101987-3102059:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3101987-3102059:1:exon

LOC115615320
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: LOC115615320
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3131979..3140740)
location: region:3131979-3140740:-1
so has part: feature:3131979-3140740:-1:exon
subclass of: SO_0000010

115615320
type: Gene
SIO_000068: ncbigene

position:3131979:-1
position: 3131979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3140740:-1
position: 3140740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3131979-3140740:-1:exon

LOC115615320
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: LOC115615320
product: ER degradation-enhancing alpha-mannosidase-like protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 161 long SRA reads, 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030503369.1
SIO_010081: LOC115615320
subclass of: SO_0000673
so part of: LOC115615320
location: complement(join(3131979..3132628,3133432..3133553,3134819..3134963,3135389..3135513,3135931..3136072,3137206..3137417,3138143..3138268,3139205..3139310,3140290..3140329,3140407..3140517,3140595..3140740))
location: region:3131979-3140740:-1
so has part: feature:3140595-3140740:-1:exon
so has part: feature:3140407-3140517:-1:exon
so has part: feature:3140290-3140329:-1:exon
so has part: feature:3139205-3139310:-1:exon
so has part: feature:3138143-3138268:-1:exon
so has part: feature:3137206-3137417:-1:exon
so has part: feature:3135931-3136072:-1:exon
so has part: feature:3135389-3135513:-1:exon
so has part: feature:3134819-3134963:-1:exon
so has part: feature:3133432-3133553:-1:exon
so has part: feature:3131979-3132628:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3140595-3140740:-1:exon

position:3140595:-1
position: 3140595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3140407-3140517:-1:exon

position:3140407:-1
position: 3140407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3140517:-1
position: 3140517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3140290-3140329:-1:exon

position:3140290:-1
position: 3140290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3140329:-1
position: 3140329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3139205-3139310:-1:exon

position:3139205:-1
position: 3139205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3139310:-1
position: 3139310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3138143-3138268:-1:exon

position:3138143:-1
position: 3138143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3138268:-1
position: 3138268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3137206-3137417:-1:exon

position:3137206:-1
position: 3137206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3137417:-1
position: 3137417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3135931-3136072:-1:exon

position:3135931:-1
position: 3135931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3136072:-1
position: 3136072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3135389-3135513:-1:exon

position:3135389:-1
position: 3135389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3135513:-1
position: 3135513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3134819-3134963:-1:exon

position:3134819:-1
position: 3134819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3134963:-1
position: 3134963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3133432-3133553:-1:exon

position:3133432:-1
position: 3133432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3133553:-1
position: 3133553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3131979-3132628:-1:exon

position:3132628:-1
position: 3132628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115615320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: LOC115615320
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ER degradation-enhancing alpha-mannosidase-like protein 2
translation: MAAPVLRSLGSLLCLWALGLPVPPAGPGAAARGLDVASYRERVRAMFYHAYEHYLESAFPYDELRPLTCDGQDTWGSFSLTLIDALDTLLILGNVSEFQRVVGVLQEGVDFDIDVNASVFETNIRVVGGLLSAHLLSKKAGVEVEVGWPCSGPLLRMAEEAARKLLPAFQTPTGMPYGTVNLLHGVNPGETPVTCTAGIGTFIVEFATLSHLTGDPVFEDVARKALKALWKNRSDIGLVGNHIDVITAKWVAQDAGIGAGVDSYFEYLVKGAILLQDEELMSMFLEYNKAIKNYTKFDDWYLWVQMYKGTVSMPVFQSLEAYWPGLQSLIGDVDNAMRTFLNYYTVWKQFGGLPEFYNIPQGYTVDKREGYPLRPELIESAMYLYRATRDPTLLELGRDAVESIEKISKVDCGFATIKDLRDHRLDNRMESFFLAETIKYLYLLFDPDNFIHNDGSDFDVVITPYGECILNAGGYVFNTEAHPIDPAALHCCRKRKEEQWEVEDLMREFYSLKKPKKFTLKRTSNHGEGKGAKDPEDASSEKGGEKRNSKKSSHSLLSCPSQSFNSKLAVLGQVFLDNT
SIO_010081: LOC115615320
subclass of: SO_0000673
so part of: LOC115615320
location: complement(join(3132137..3132628,3133432..3133553,3134819..3134963,3135389..3135513,3135931..3136072,3137206..3137417,3138143..3138268,3139205..3139310,3140290..3140329,3140407..3140517,3140595..3140713))
location: region:3132137-3140713:-1
so has part: feature:3140595-3140713:-1:exon
so has part: feature:3140407-3140517:-1:exon
so has part: feature:3140290-3140329:-1:exon
so has part: feature:3139205-3139310:-1:exon
so has part: feature:3138143-3138268:-1:exon
so has part: feature:3137206-3137417:-1:exon
so has part: feature:3135931-3136072:-1:exon
so has part: feature:3135389-3135513:-1:exon
so has part: feature:3134819-3134963:-1:exon
so has part: feature:3133432-3133553:-1:exon
so has part: feature:3132137-3132628:-1:exon

XP_030359229.1
type: Protein
SIO_000068: ncbiprotein

position:3132137:-1
position: 3132137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3140713:-1
position: 3140713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3140595-3140713:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3140407-3140517:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3140290-3140329:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3139205-3139310:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3138143-3138268:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3137206-3137417:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3135931-3136072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3135389-3135513:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3134819-3134963:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3133432-3133553:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3132137-3132628:-1:exon

TOX2
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: TOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3295898..3438982
location: region:3295898-3438982:1
so has part: feature:3295898-3438982:1:exon
subclass of: SO_0000010

115615284
type: Gene
SIO_000068: ncbigene

position:3295898:1
position: 3295898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3438982:1
position: 3438982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3295898-3438982:1:exon

TOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: TOX2
product: TOX high mobility group box family member 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 168 long SRA reads, 4 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030503254.1
SIO_010081: TOX2
subclass of: SO_0000673
so part of: TOX2
location: join(3295898..3296217,3356004..3356069,3380484..3380729,3414242..3414481,3418988..3419215,3428394..3428474,3429691..3430099,3432146..3432276,3437848..3438982)
location: region:3295898-3438982:1
so has part: feature:3295898-3296217:1:exon
so has part: feature:3356004-3356069:1:exon
so has part: feature:3380484-3380729:1:exon
so has part: feature:3414242-3414481:1:exon
so has part: feature:3418988-3419215:1:exon
so has part: feature:3428394-3428474:1:exon
so has part: feature:3429691-3430099:1:exon
so has part: feature:3432146-3432276:1:exon
so has part: feature:3437848-3438982:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3295898-3296217:1:exon

position:3296217:1
position: 3296217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3356004-3356069:1:exon

position:3356004:1
position: 3356004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3356069:1
position: 3356069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3380484-3380729:1:exon

position:3380484:1
position: 3380484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3380729:1
position: 3380729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3414242-3414481:1:exon

position:3414242:1
position: 3414242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3414481:1
position: 3414481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3418988-3419215:1:exon

position:3418988:1
position: 3418988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3419215:1
position: 3419215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3428394-3428474:1:exon

position:3428394:1
position: 3428394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3428474:1
position: 3428474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3429691-3430099:1:exon

position:3429691:1
position: 3429691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3430099:1
position: 3430099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3432146-3432276:1:exon

position:3432146:1
position: 3432146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3432276:1
position: 3432276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3437848-3438982:1:exon

position:3437848:1
position: 3437848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: TOX2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: TOX high mobility group box family member 2
translation: MDVRFYPSAPTAVGSLPGADPTCLGPLDYYHCNKFDGENMYMGMNDNAQEFLSANQTYNSQNENNEDYEIPPITPPNLPDPSLLHLVDHETGYHSLCHSLPSNSLIPAYPYQNMDLPAIMVSNMLSQDGHLLSSQLPTIQEMVHSDATSYESNRQVPLINRPGMLAGPMSALSQSQLISQMGIRSGVTHGSPSPPGSKSATPSPSSSTQEEETESHYKVTGEKRPSTDLGKKPKSQKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSADQGETKSAQSNPPSKMIPPKQPMYPMPPQASSPYPGLGSLLSPSDLQNYRGHPHPGLSRPLTSKPMLPSISASPPPSFQISPPLHQQLSLHHPQSSLLSQPLSMQQVPQQPLLPPPMALQVQPPMNASPPGQQDFSHISSEFQNSVGPRSPGASNPPGSTEWDNDYPSRECGINHCSMLPRDKALYLT
SIO_010081: TOX2
subclass of: SO_0000673
so part of: TOX2
location: join(3296116..3296217,3356004..3356069,3380484..3380729,3414242..3414481,3418988..3419215,3428394..3428474,3429691..3430099,3432146..3432276,3437848..3437884)
location: region:3296116-3437884:1
so has part: feature:3296116-3296217:1:exon
so has part: feature:3356004-3356069:1:exon
so has part: feature:3380484-3380729:1:exon
so has part: feature:3414242-3414481:1:exon
so has part: feature:3418988-3419215:1:exon
so has part: feature:3428394-3428474:1:exon
so has part: feature:3429691-3430099:1:exon
so has part: feature:3432146-3432276:1:exon
so has part: feature:3437848-3437884:1:exon

XP_030359114.1
type: Protein
SIO_000068: ncbiprotein

position:3296116:1
position: 3296116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3437884:1
position: 3437884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3296116-3296217:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3356004-3356069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3380484-3380729:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3414242-3414481:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3418988-3419215:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3428394-3428474:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3429691-3430099:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3432146-3432276:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3437848-3437884:1:exon

SNTA1
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: SNTA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3472065..3484233)
location: region:3472065-3484233:-1
so has part: feature:3472065-3484233:-1:exon
subclass of: SO_0000010

115615353
type: Gene
SIO_000068: ncbigene

position:3472065:-1
position: 3472065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3484233:-1
position: 3484233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3472065-3484233:-1:exon

SNTA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: SNTA1
product: syntrophin alpha 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 long SRA reads, 18 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030503437.1
SIO_010081: SNTA1
subclass of: SO_0000673
so part of: SNTA1
location: complement(join(3472065..3472941,3473219..3473406,3473483..3473679,3474631..3474761,3474830..3475037,3475129..3475327,3480945..3481130,3483931..3484233))
location: region:3472065-3484233:-1
so has part: feature:3483931-3484233:-1:exon
so has part: feature:3480945-3481130:-1:exon
so has part: feature:3475129-3475327:-1:exon
so has part: feature:3474830-3475037:-1:exon
so has part: feature:3474631-3474761:-1:exon
so has part: feature:3473483-3473679:-1:exon
so has part: feature:3473219-3473406:-1:exon
so has part: feature:3472065-3472941:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3483931-3484233:-1:exon

position:3483931:-1
position: 3483931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3480945-3481130:-1:exon

position:3480945:-1
position: 3480945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3481130:-1
position: 3481130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3475129-3475327:-1:exon

position:3475129:-1
position: 3475129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3475327:-1
position: 3475327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3474830-3475037:-1:exon

position:3474830:-1
position: 3474830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3475037:-1
position: 3475037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3474631-3474761:-1:exon

position:3474631:-1
position: 3474631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3474761:-1
position: 3474761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3473483-3473679:-1:exon

position:3473483:-1
position: 3473483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3473679:-1
position: 3473679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3473219-3473406:-1:exon

position:3473219:-1
position: 3473219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3473406:-1
position: 3473406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3472065-3472941:-1:exon

position:3472941:-1
position: 3472941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNTA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: SNTA1
product: syntrophin alpha 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030503438.1
SIO_010081: SNTA1
subclass of: SO_0000673
so part of: SNTA1
location: complement(join(3472065..3472941,3473219..3473406,3473483..3473679,3474631..3474761,3474830..3475037,3475129..3475327,3480945..3481130,3481286..3481516))
location: region:3472065-3481516:-1
so has part: feature:3481286-3481516:-1:exon
so has part: feature:3480945-3481130:-1:exon
so has part: feature:3475129-3475327:-1:exon
so has part: feature:3474830-3475037:-1:exon
so has part: feature:3474631-3474761:-1:exon
so has part: feature:3473483-3473679:-1:exon
so has part: feature:3473219-3473406:-1:exon
so has part: feature:3472065-3472941:-1:exon

position:3481516:-1
position: 3481516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3481286-3481516:-1:exon

position:3481286:-1
position: 3481286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3480945-3481130:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3475129-3475327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3474830-3475037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3474631-3474761:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3473483-3473679:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3473219-3473406:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3472065-3472941:-1:exon

SNTA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: SNTA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1-syntrophin isoform X1
translation: MAAGRRAPRTGLLELRGPGGQWLRVLLSLAEDALGVSPADGPGPAAGPGEAPAAQLNGGEPGSAVPEALANIRRTVRVVKQDVGGLGISIKGGRENKMPILISKIFKGLAADQTEALYVGDAILAVNGTDLSEATHDEAVQALKKTGKEVVLEVKYMKEISPYFKNSSAGATVSWDPSPATLQKRSSPVLPPKELREVRTVPLKMCYVSCKCLPTDPEHRYLEVCSADGRVALFLRAKDEATAQSWLSAIQASAGALVPRVKEELQAQLAGAGAVAGRDVKHVGWLTEQLPSAGTRNLLAILTEKELLLYSSLPQSRDALGKPVHSYPLIATRLVHSGPAKGSALYEAELSFALRSGTRLGVQTHLFSLESPRDLALWTRLLVDGTHGAAELVQEVSAACTWKGQDCTLSIHIDKGFTISTTEPGLSKTILLQQPFEKLQMSSDDGTKMLYLDFGGPEGEIQLDLHSCPKTIVFIIHSFLSAKVTRLGLLA
SIO_010081: SNTA1
subclass of: SO_0000673
so part of: SNTA1
location: complement(join(3472849..3472941,3473219..3473406,3473483..3473679,3474631..3474761,3474830..3475037,3475129..3475327,3480945..3481130,3483931..3484204))
location: region:3472849-3484204:-1
so has part: feature:3483931-3484204:-1:exon
so has part: feature:3480945-3481130:-1:exon
so has part: feature:3475129-3475327:-1:exon
so has part: feature:3474830-3475037:-1:exon
so has part: feature:3474631-3474761:-1:exon
so has part: feature:3473483-3473679:-1:exon
so has part: feature:3473219-3473406:-1:exon
so has part: feature:3472849-3472941:-1:exon

XP_030359297.1
type: Protein
SIO_000068: ncbiprotein

position:3472849:-1
position: 3472849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3484204:-1
position: 3484204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3483931-3484204:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3480945-3481130:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3475129-3475327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3474830-3475037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3474631-3474761:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3473483-3473679:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3473219-3473406:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3472849-3472941:-1:exon

SNTA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: SNTA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1-syntrophin isoform X2
translation: MPILISKIFKGLAADQTEALYVGDAILAVNGTDLSEATHDEAVQALKKTGKEVVLEVKYMKEISPYFKNSSAGATVSWDPSPATLQKRSSPVLPPKELREVRTVPLKMCYVSCKCLPTDPEHRYLEVCSADGRVALFLRAKDEATAQSWLSAIQASAGALVPRVKEELQAQLAGAGAVAGRDVKHVGWLTEQLPSAGTRNLLAILTEKELLLYSSLPQSRDALGKPVHSYPLIATRLVHSGPAKGSALYEAELSFALRSGTRLGVQTHLFSLESPRDLALWTRLLVDGTHGAAELVQEVSAACTWKGQDCTLSIHIDKGFTISTTEPGLSKTILLQQPFEKLQMSSDDGTKMLYLDFGGPEGEIQLDLHSCPKTIVFIIHSFLSAKVTRLGLLA
SIO_010081: SNTA1
subclass of: SO_0000673
so part of: SNTA1
location: complement(join(3472849..3472941,3473219..3473406,3473483..3473679,3474631..3474761,3474830..3475037,3475129..3475327,3480945..3481113))
location: region:3472849-3481113:-1
so has part: feature:3480945-3481113:-1:exon
so has part: feature:3475129-3475327:-1:exon
so has part: feature:3474830-3475037:-1:exon
so has part: feature:3474631-3474761:-1:exon
so has part: feature:3473483-3473679:-1:exon
so has part: feature:3473219-3473406:-1:exon
so has part: feature:3472849-3472941:-1:exon

XP_030359298.1
type: Protein
SIO_000068: ncbiprotein

position:3481113:-1
position: 3481113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3480945-3481113:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3475129-3475327:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3474830-3475037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3474631-3474761:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3473483-3473679:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3473219-3473406:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3472849-3472941:-1:exon

CBFA2T2
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: CBFA2T2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3507431..3570397
location: region:3507431-3570397:1
so has part: feature:3507431-3570397:1:exon
subclass of: SO_0000010

115615413
type: Gene
SIO_000068: ncbigene

position:3507431:1
position: 3507431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3570397:1
position: 3570397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3507431-3570397:1:exon

CBFA2T2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: CBFA2T2
product: CBFA2/RUNX1 partner transcriptional co-repressor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 84 long SRA reads, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030503502.1
SIO_010081: CBFA2T2
subclass of: SO_0000673
so part of: CBFA2T2
location: join(3507431..3507513,3552368..3552511,3557033..3557274,3559389..3559478,3560609..3560790,3561381..3561634,3562318..3562403,3562668..3562860,3564506..3564574,3564895..3565085,3567755..3570397)
location: region:3507431-3570397:1
so has part: feature:3507431-3507513:1:exon
so has part: feature:3552368-3552511:1:exon
so has part: feature:3557033-3557274:1:exon
so has part: feature:3559389-3559478:1:exon
so has part: feature:3560609-3560790:1:exon
so has part: feature:3561381-3561634:1:exon
so has part: feature:3562318-3562403:1:exon
so has part: feature:3562668-3562860:1:exon
so has part: feature:3564506-3564574:1:exon
so has part: feature:3564895-3565085:1:exon
so has part: feature:3567755-3570397:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3507431-3507513:1:exon

position:3507513:1
position: 3507513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3552368-3552511:1:exon

position:3552368:1
position: 3552368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3552511:1
position: 3552511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3557033-3557274:1:exon

position:3557033:1
position: 3557033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3557274:1
position: 3557274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3559389-3559478:1:exon

position:3559389:1
position: 3559389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3559478:1
position: 3559478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3560609-3560790:1:exon

position:3560609:1
position: 3560609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3560790:1
position: 3560790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3561381-3561634:1:exon

position:3561381:1
position: 3561381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3561634:1
position: 3561634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3562318-3562403:1:exon

position:3562318:1
position: 3562318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3562403:1
position: 3562403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3562668-3562860:1:exon

position:3562668:1
position: 3562668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3562860:1
position: 3562860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3564506-3564574:1:exon

position:3564506:1
position: 3564506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3564574:1
position: 3564574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3564895-3565085:1:exon

position:3564895:1
position: 3564895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3565085:1
position: 3565085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3567755-3570397:1:exon

position:3567755:1
position: 3567755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CBFA2T2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: CBFA2T2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CBFA2T2 isoform X1
translation: MVGIPGGCQFAGEKRVPVMPGSPVEVKIQSRSSPPNMPPLPPVNPGGPRPVSFTPAALPNGINHSPPTLNGAPSPPQRFSNGPSSSSSSSLTNQQLPATCGARQLSKLKRFLTTLQQFGNDISPEIGEKVRTLVLALVNSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQYLAQHEHILLNTNTTSPADSSELLIEVNGNGKRHSPDRRDDSSFERDPLPTDPPAKRVCTISPAPRHSPALTIPLVNPGGQFHPTPPPLQHYTLEDIATSHLYRDPSKMLEHREIRDRHGALGLNGGYQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRCQEADREELNYWKRRCSEAEPRKAGSDLLPRQHSPSSSDSIGSDSLREFSSRSGTGYVTEEIWKKAEEAVNEVKRQAMSEVQKAVAEAEQKAFEMIASERARMEQTIADAKRQATEDAFLVINEQEESTESCWNCGRKASETCSGCNIARYCGSFCQHKDWERHHRICGQSLHGQSKPLALPTGRSAAKSLDGVPSPALEKTSATTSRSSTPASVTAIDTNGL
SIO_010081: CBFA2T2
subclass of: SO_0000673
so part of: CBFA2T2
location: join(3507486..3507513,3552368..3552511,3557033..3557274,3559389..3559478,3560609..3560790,3561381..3561634,3562318..3562403,3562668..3562860,3564506..3564574,3564895..3565085,3567755..3568036)
location: region:3507486-3568036:1
so has part: feature:3507486-3507513:1:exon
so has part: feature:3552368-3552511:1:exon
so has part: feature:3557033-3557274:1:exon
so has part: feature:3559389-3559478:1:exon
so has part: feature:3560609-3560790:1:exon
so has part: feature:3561381-3561634:1:exon
so has part: feature:3562318-3562403:1:exon
so has part: feature:3562668-3562860:1:exon
so has part: feature:3564506-3564574:1:exon
so has part: feature:3564895-3565085:1:exon
so has part: feature:3567755-3568036:1:exon

XP_030359362.1
type: Protein
SIO_000068: ncbiprotein

position:3507486:1
position: 3507486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3568036:1
position: 3568036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3507486-3507513:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3552368-3552511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3557033-3557274:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3559389-3559478:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3560609-3560790:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3561381-3561634:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3562318-3562403:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3562668-3562860:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3564506-3564574:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3564895-3565085:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3567755-3568036:1:exon

CBFA2T2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: CBFA2T2
product: CBFA2/RUNX1 partner transcriptional co-repressor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 86 long SRA reads, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030503503.1
SIO_010081: CBFA2T2
subclass of: SO_0000673
so part of: CBFA2T2
location: join(3529278..3530554,3552368..3552511,3557033..3557274,3559389..3559478,3560609..3560790,3561381..3561634,3562318..3562403,3562668..3562860,3564506..3564574,3564895..3565085,3567755..3570397)
location: region:3529278-3570397:1
so has part: feature:3529278-3530554:1:exon
so has part: feature:3552368-3552511:1:exon
so has part: feature:3557033-3557274:1:exon
so has part: feature:3559389-3559478:1:exon
so has part: feature:3560609-3560790:1:exon
so has part: feature:3561381-3561634:1:exon
so has part: feature:3562318-3562403:1:exon
so has part: feature:3562668-3562860:1:exon
so has part: feature:3564506-3564574:1:exon
so has part: feature:3564895-3565085:1:exon
so has part: feature:3567755-3570397:1:exon

position:3529278:1
position: 3529278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3529278-3530554:1:exon

position:3530554:1
position: 3530554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3552368-3552511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3557033-3557274:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3559389-3559478:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3560609-3560790:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3561381-3561634:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3562318-3562403:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3562668-3562860:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3564506-3564574:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3564895-3565085:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3567755-3570397:1:exon

CBFA2T2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: CBFA2T2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CBFA2T2 isoform X2
translation: MPGSPVEVKIQSRSSPPNMPPLPPVNPGGPRPVSFTPAALPNGINHSPPTLNGAPSPPQRFSNGPSSSSSSSLTNQQLPATCGARQLSKLKRFLTTLQQFGNDISPEIGEKVRTLVLALVNSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQYLAQHEHILLNTNTTSPADSSELLIEVNGNGKRHSPDRRDDSSFERDPLPTDPPAKRVCTISPAPRHSPALTIPLVNPGGQFHPTPPPLQHYTLEDIATSHLYRDPSKMLEHREIRDRHGALGLNGGYQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRCQEADREELNYWKRRCSEAEPRKAGSDLLPRQHSPSSSDSIGSDSLREFSSRSGTGYVTEEIWKKAEEAVNEVKRQAMSEVQKAVAEAEQKAFEMIASERARMEQTIADAKRQATEDAFLVINEQEESTESCWNCGRKASETCSGCNIARYCGSFCQHKDWERHHRICGQSLHGQSKPLALPTGRSAAKSLDGVPSPALEKTSATTSRSSTPASVTAIDTNGL
SIO_010081: CBFA2T2
subclass of: SO_0000673
so part of: CBFA2T2
location: join(3552394..3552511,3557033..3557274,3559389..3559478,3560609..3560790,3561381..3561634,3562318..3562403,3562668..3562860,3564506..3564574,3564895..3565085,3567755..3568036)
location: region:3552394-3568036:1
so has part: feature:3552394-3552511:1:exon
so has part: feature:3557033-3557274:1:exon
so has part: feature:3559389-3559478:1:exon
so has part: feature:3560609-3560790:1:exon
so has part: feature:3561381-3561634:1:exon
so has part: feature:3562318-3562403:1:exon
so has part: feature:3562668-3562860:1:exon
so has part: feature:3564506-3564574:1:exon
so has part: feature:3564895-3565085:1:exon
so has part: feature:3567755-3568036:1:exon

XP_030359363.1
type: Protein
SIO_000068: ncbiprotein

position:3552394:1
position: 3552394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3552394-3552511:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3557033-3557274:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3559389-3559478:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3560609-3560790:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3561381-3561634:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3562318-3562403:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3562668-3562860:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3564506-3564574:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3564895-3565085:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3567755-3568036:1:exon

NECAB3
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: NECAB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3571332..3596650)
location: region:3571332-3596650:-1
so has part: feature:3571332-3596650:-1:exon
subclass of: SO_0000010

115615415
type: Gene
SIO_000068: ncbigene

position:3571332:-1
position: 3571332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3596650:-1
position: 3596650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3571332-3596650:-1:exon

NECAB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: NECAB3
product: N-terminal EF-hand calcium binding protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030503504.1
SIO_010081: NECAB3
subclass of: SO_0000673
so part of: NECAB3
location: complement(join(3571332..3571896,3572604..3572695,3573019..3573096,3574545..3574657,3575105..3575158,3575545..3575624,3575902..3576023,3576194..3576330,3583177..3583274,3583589..3583614,3590664..3590772,3591723..3591747,3596342..3596650))
location: region:3571332-3596650:-1
so has part: feature:3596342-3596650:-1:exon
so has part: feature:3591723-3591747:-1:exon
so has part: feature:3590664-3590772:-1:exon
so has part: feature:3583589-3583614:-1:exon
so has part: feature:3583177-3583274:-1:exon
so has part: feature:3576194-3576330:-1:exon
so has part: feature:3575902-3576023:-1:exon
so has part: feature:3575545-3575624:-1:exon
so has part: feature:3575105-3575158:-1:exon
so has part: feature:3574545-3574657:-1:exon
so has part: feature:3573019-3573096:-1:exon
so has part: feature:3572604-3572695:-1:exon
so has part: feature:3571332-3571896:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3596342-3596650:-1:exon

position:3596342:-1
position: 3596342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3591723-3591747:-1:exon

position:3591723:-1
position: 3591723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3591747:-1
position: 3591747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3590664-3590772:-1:exon

position:3590664:-1
position: 3590664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3590772:-1
position: 3590772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3583589-3583614:-1:exon

position:3583589:-1
position: 3583589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3583614:-1
position: 3583614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3583177-3583274:-1:exon

position:3583177:-1
position: 3583177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3583274:-1
position: 3583274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3576194-3576330:-1:exon

position:3576194:-1
position: 3576194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3576330:-1
position: 3576330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3575902-3576023:-1:exon

position:3575902:-1
position: 3575902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3576023:-1
position: 3576023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3575545-3575624:-1:exon

position:3575545:-1
position: 3575545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3575624:-1
position: 3575624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3575105-3575158:-1:exon

position:3575105:-1
position: 3575105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3575158:-1
position: 3575158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3574545-3574657:-1:exon

position:3574545:-1
position: 3574545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3574657:-1
position: 3574657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3573019-3573096:-1:exon

position:3573019:-1
position: 3573019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3573096:-1
position: 3573096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3572604-3572695:-1:exon

position:3572604:-1
position: 3572604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3572695:-1
position: 3572695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3571332-3571896:-1:exon

position:3571896:-1
position: 3571896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NECAB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: NECAB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-terminal EF-hand calcium-binding protein 3
translation: MMACAELLAVCLLSANRGPAPRRQPLPIFHDIFRRADKNDDGKLSFEEFKNYFADGILSSEELWELFSGIDRRHSDNVDTEKLCDYFSAYLGEYRNVLSALEALNSAVLAAMDKTKLRYETSSKMEQFLTRFLLRETLQQLQSLQASLECAVDTVEEQAGRDRKDIKKPETSVGLRSGRRCGRRGQRNVCLSPTDPYSGMLTTGVCVEDNSQWMAQINRLQQLIEKLECKSPRLEPLKEEAMCKGRDAHILVAKRQISVATSSIEEFRQAFRSYTEGTAGQSSCLHVSACKLRDEACFILYEFWQDATAWRSHLQSSCSKTFQRSIISLLESPELLTTMLFPASWWIMNNN
SIO_010081: NECAB3
subclass of: SO_0000673
so part of: NECAB3
location: complement(join(3571868..3571896,3572604..3572695,3573019..3573096,3574545..3574657,3575105..3575158,3575545..3575624,3575902..3576023,3576194..3576330,3583177..3583274,3583589..3583614,3590664..3590772,3591723..3591747,3596342..3596434))
location: region:3571868-3596434:-1
so has part: feature:3596342-3596434:-1:exon
so has part: feature:3591723-3591747:-1:exon
so has part: feature:3590664-3590772:-1:exon
so has part: feature:3583589-3583614:-1:exon
so has part: feature:3583177-3583274:-1:exon
so has part: feature:3576194-3576330:-1:exon
so has part: feature:3575902-3576023:-1:exon
so has part: feature:3575545-3575624:-1:exon
so has part: feature:3575105-3575158:-1:exon
so has part: feature:3574545-3574657:-1:exon
so has part: feature:3573019-3573096:-1:exon
so has part: feature:3572604-3572695:-1:exon
so has part: feature:3571868-3571896:-1:exon

XP_030359364.1
type: Protein
SIO_000068: ncbiprotein

position:3571868:-1
position: 3571868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3596434:-1
position: 3596434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3596342-3596434:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3591723-3591747:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3590664-3590772:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3583589-3583614:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3583177-3583274:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3576194-3576330:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3575902-3576023:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3575545-3575624:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3575105-3575158:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3574545-3574657:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3573019-3573096:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3572604-3572695:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3571868-3571896:-1:exon

E2F1
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: E2F1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3601928..3605918)
location: region:3601928-3605918:-1
so has part: feature:3601928-3605918:-1:exon
subclass of: SO_0000010

115615417
type: Gene
SIO_000068: ncbigene

position:3601928:-1
position: 3601928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3605918:-1
position: 3605918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3601928-3605918:-1:exon

E2F1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: E2F1
product: E2F transcription factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030503508.2
SIO_010081: E2F1
subclass of: SO_0000673
so part of: E2F1
location: complement(join(3601928..3602508,3602748..3602952,3603038..3603152,3603260..3603412,3603786..3604005,3604499..3604589,3605401..3605918))
location: region:3601928-3605918:-1
so has part: feature:3605401-3605918:-1:exon
so has part: feature:3604499-3604589:-1:exon
so has part: feature:3603786-3604005:-1:exon
so has part: feature:3603260-3603412:-1:exon
so has part: feature:3603038-3603152:-1:exon
so has part: feature:3602748-3602952:-1:exon
so has part: feature:3601928-3602508:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3605401-3605918:-1:exon

position:3605401:-1
position: 3605401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3604499-3604589:-1:exon

position:3604499:-1
position: 3604499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3604589:-1
position: 3604589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3603786-3604005:-1:exon

position:3603786:-1
position: 3603786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3604005:-1
position: 3604005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3603260-3603412:-1:exon

position:3603260:-1
position: 3603260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3603412:-1
position: 3603412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3603038-3603152:-1:exon

position:3603038:-1
position: 3603038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3603152:-1
position: 3603152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3602748-3602952:-1:exon

position:3602748:-1
position: 3602748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3602952:-1
position: 3602952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3601928-3602508:-1:exon

position:3602508:-1
position: 3602508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

E2F1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: E2F1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor E2F1
translation: MAAAGGGAAGLAALLGSSSPHLLIVSAAADEPAGGGGGGGHPDTDQVLLFATPQPARPGAAPRRPALGRPPVKRKLNLETDHQYIAESLSVGRGKPRNPVRGAKSPGEKSRYETSLNLTTKRFLELLSQSPDGVVDLNWAAEVLKVQKRRIYDITNVLEGIQLITKKSKNNIQWLGSQAAVGAPGRHRRLEQELRELQAAERQLDELIQTCSAQLRLLTEDPANQHAAYVTCQDLRSIVDPAEQMVMVIKAPAETQLQVSDPAEAFQVSLRSTQGPIDVFLCPEDSSGVCSPVKSPFKAPAEEPSPSHPQPRASPLLHPAQDMNLPLLPGEQETLLPGSSKGPAEEPSLSPLASMDALLEQSREDFPEFLADEFMNQAQDYHFGLEEGEGISELFDCDFGDFTPLDF
SIO_010081: E2F1
subclass of: SO_0000673
so part of: E2F1
location: complement(join(3602282..3602508,3602748..3602952,3603038..3603152,3603260..3603412,3603786..3604005,3604499..3604589,3605401..3605613))
location: region:3602282-3605613:-1
so has part: feature:3605401-3605613:-1:exon
so has part: feature:3604499-3604589:-1:exon
so has part: feature:3603786-3604005:-1:exon
so has part: feature:3603260-3603412:-1:exon
so has part: feature:3603038-3603152:-1:exon
so has part: feature:3602748-3602952:-1:exon
so has part: feature:3602282-3602508:-1:exon

XP_030359368.1
type: Protein
SIO_000068: ncbiprotein

position:3602282:-1
position: 3602282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3605613:-1
position: 3605613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3605401-3605613:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3604499-3604589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3603786-3604005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3603260-3603412:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3603038-3603152:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3602748-3602952:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3602282-3602508:-1:exon

PXMP4
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: PXMP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3608885..3616922)
location: region:3608885-3616922:-1
so has part: feature:3608885-3616922:-1:exon
subclass of: SO_0000010

115615419
type: Gene
SIO_000068: ncbigene

position:3608885:-1
position: 3608885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3616922:-1
position: 3616922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3608885-3616922:-1:exon

PXMP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: PXMP4
product: peroxisomal membrane protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 124 long SRA reads, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030503510.1
SIO_010081: PXMP4
subclass of: SO_0000673
so part of: PXMP4
location: complement(join(3608885..3612394,3613888..3614148,3614884..3615082,3615736..3615798,3616773..3616922))
location: region:3608885-3616922:-1
so has part: feature:3616773-3616922:-1:exon
so has part: feature:3615736-3615798:-1:exon
so has part: feature:3614884-3615082:-1:exon
so has part: feature:3613888-3614148:-1:exon
so has part: feature:3608885-3612394:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3616773-3616922:-1:exon

position:3616773:-1
position: 3616773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3615736-3615798:-1:exon

position:3615736:-1
position: 3615736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3615798:-1
position: 3615798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3614884-3615082:-1:exon

position:3614884:-1
position: 3614884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3615082:-1
position: 3615082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3613888-3614148:-1:exon

position:3613888:-1
position: 3613888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3614148:-1
position: 3614148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3608885-3612394:-1:exon

position:3612394:-1
position: 3612394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PXMP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2489341
gene: PXMP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxisomal membrane protein 4
translation: MAGGGDPLRALLRAANALLQQRRYRAALAVLKGFRNGAVYGAKVRAPHALVMTFLFKSGSLREKLESIAQATYTHSRNLAYFVFTYKGLMALQSRLQGKKIPFHSFFAACIGGWLVFGDNNPINSQIVMYLLSRILFGLSRLAVEKGYIPQPKQDPFPLVAALVWGTVLWLFEYHRHTLQPSLQSSMTYLYDDSNTWHDISDFLVYNKRTDK
SIO_010081: PXMP4
subclass of: SO_0000673
so part of: PXMP4
location: complement(join(3613888..3614148,3614884..3615082,3615736..3615798,3616773..3616888))
location: region:3613888-3616888:-1
so has part: feature:3616773-3616888:-1:exon
so has part: feature:3615736-3615798:-1:exon
so has part: feature:3614884-3615082:-1:exon
so has part: feature:3613888-3614148:-1:exon

XP_030359370.1
type: Protein
SIO_000068: ncbiprotein

position:3616888:-1
position: 3616888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3616773-3616888:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3615736-3615798:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3614884-3615082:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3613888-3614148:-1:exon

ZNF341
type: Gene
subclass of: SO_0000704
RO_0002162: 2489341
gene: ZNF341
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3617337..3638619
location: region:3617337-3638619:1
so has part: feature:3617337-3638619:1:exon
subclass of: SO_0000010

115615416
type: Gene
SIO_000068: ncbigene

position:3617337:1
position: 3617337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3638619:1
position: 3638619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3617337-3638619:1:exon

ZNF341
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2489341
gene: ZNF341
product: zinc finger protein 341, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 107 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030503506.1
SIO_010081: ZNF341
subclass of: SO_0000673
so part of: ZNF341
location: join(3617337..3617417,3621701..3621811,3622923..3623110,3624527..3624679,3625294..3625533,3627041..3627236,3628388..3628472,3629459..3629649,3630536..3630729,3631510..3631718,3633050..3633146,3634489..3634621,3635076..3635187,3636002..3636072,3637526..3638619)
location: region:3617337-3638619:1
so has part: feature:3617337-3617417:1:exon
so has part: feature:3621701-3621811:1:exon
so has part: feature:3622923-3623110:1:exon
so has part: feature:3624527-3624679:1:exon
so has part: feature:3625294-3625533:1:exon
so has part: feature:3627041-3627236:1:exon
so has part: feature:3628388-3628472:1:exon
so has part: feature:3629459-3629649:1:exon
so has part: feature:3630536-3630729:1:exon
so has part: feature:3631510-3631718:1:exon
so has part: feature:3633050-3633146:1:exon
so has part: feature:3634489-3634621:1:exon
so has part: feature:3635076-3635187:1:exon
so has part: feature:3636002-3636072:1:exon
so has part: feature:3637526-3638619:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3617337-3617417:1:exon

position:3617417:1
position: 3617417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3621701-3621811:1:exon

position:3621701:1
position: 3621701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3621811:1
position: 3621811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3622923-3623110:1:exon

position:3622923:1
position: 3622923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3623110:1
position: 3623110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3624527-3624679:1:exon

position:3624527:1
position: 3624527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3624679:1
position: 3624679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3625294-3625533:1:exon

position:3625294:1
position: 3625294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3625533:1
position: 3625533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3627041-3627236:1:exon

position:3627041:1
position: 3627041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3627236:1
position: 3627236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3628388-3628472:1:exon

position:3628388:1
position: 3628388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3628472:1
position: 3628472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3629459-3629649:1:exon

position:3629459:1
position: 3629459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3629649:1
position: 3629649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3630536-3630729:1:exon

position:3630536:1
position: 3630536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3630729:1
position: 3630729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3631510-3631718:1:exon

position:3631510:1
position: 3631510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3631718:1
position: 3631718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3633050-3633146:1:exon

position:3633050:1
position: 3633050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3633146:1
position: 3633146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3634489-3634621:1:exon

position:3634489:1
position: 3634489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3634621:1
position: 3634621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition