Deinococcus psychrotolerans strain S14-83 plasmid unnamed2, complete sequence.
Bacteria; Deinococcota; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.
Deinococcus shelandsis sp. nov., isolated from South Shetland Islands soil of Antarctica
Submitted (27-NOV-2018) Wuhan University, College of Life Science, Guangba Road, Wuhan, Hubei 430000, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP034186.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 3.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 57.93x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/01/2023 05:19:04\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,230\nCDSs (total) :: 4,170\nGenes (coding) :: 4,111\nCDSs (with protein) :: 4,111\nGenes (RNA) :: 60\nrRNAs :: 2, 3, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 3, 2 (5S, 16S, 23S)\ntRNAs :: 49\nncRNAs :: 4\nPseudo Genes (total) :: 59\nCDSs (without protein) :: 59\nPseudo Genes (ambiguous residues) :: 0 of 59\nPseudo Genes (frameshifted) :: 25 of 59\nPseudo Genes (incomplete) :: 41 of 59\nPseudo Genes (internal stop) :: 13 of 59\nPseudo Genes (multiple problems) :: 17 of 59\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type strain of Deinococcus psychrotolerans
COORDINATES: ab initio prediction:GeneMarkS-2+
GO:0016791 - phosphatase activity [Evidence IEA]
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF024970.2
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012694795.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF033592.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005456886.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010496524.1
COORDINATES: protein motif:HMM:NF015500.2
COORDINATES: protein motif:HMM:NF012515.2
1-phosphofructokinase family hexose kinase
COORDINATES: protein motif:HMM:NF013296.2
COORDINATES: similar to AA sequence:RefSeq:WP_011649026.1
GO:0097367 - carbohydrate derivative binding [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013986.2
BadF/BadG/BcrA/BcrD ATPase family protein
COORDINATES: protein motif:HMM:NF024808.2
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
sugar ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF012738.2
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003575409.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: protein motif:HMM:NF024954.2
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF033545.0
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012870.2
COORDINATES: protein motif:HMM:NF013752.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012694551.1
COORDINATES: similar to AA sequence:RefSeq:WP_012694552.1
GO:0009436 - glyoxylate catabolic process [Evidence IEA]; GO:0071704 - organic substance metabolic process [Evidence IEA]
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017878498.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012694554.1
COORDINATES: similar to AA sequence:RefSeq:WP_017878496.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019653779.1
COORDINATES: similar to AA sequence:RefSeq:WP_012694557.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612350.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
DDE-type integrase/transposase/recombinase
COORDINATES: protein motif:HMM:NF012772.2
GO:0071111 - cyclic-guanylate-specific phosphodiesterase activity [Evidence IEA]; GO:0052621 - diguanylate cyclase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
bifunctional diguanylate cyclase/phosphodiesterase
COORDINATES: protein motif:HMM:NF024603.2
COORDINATES: similar to AA sequence:RefSeq:WP_012354141.1
styrene monooxygenase/indole monooxygenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010887257.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00254.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0005525 - GTP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF037660.2
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015586747.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_019586178.1
COORDINATES: similar to AA sequence:RefSeq:WP_015231171.1
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019586176.1
COORDINATES: similar to AA sequence:RefSeq:WP_012695168.1
COORDINATES: similar to AA sequence:RefSeq:WP_010883970.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019305.2
COORDINATES: protein motif:HMM:NF033516.0
COORDINATES: protein motif:HMM:NF013677.2
COORDINATES: protein motif:HMM:NF013126.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
glycoside hydrolase family 3 N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019586124.1
GO:0008422 - beta-glucosidase activity [Evidence IEA]
GO:0030245 - cellulose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019011860.1
COORDINATES: similar to AA sequence:RefSeq:WP_019011861.1
COORDINATES: similar to AA sequence:RefSeq:WP_013557046.1
COORDINATES: similar to AA sequence:RefSeq:WP_015234942.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0000976 - transcription cis-regulatory region binding [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]; GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011525822.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO:0007165 - signal transduction [Evidence IEA]
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_011525823.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019011819.1
COORDINATES: similar to AA sequence:RefSeq:WP_019012015.1
COORDINATES: similar to AA sequence:RefSeq:WP_014144798.1
COORDINATES: similar to AA sequence:RefSeq:WP_018465218.1
COORDINATES: similar to AA sequence:RefSeq:WP_015193290.1
COORDINATES: similar to AA sequence:RefSeq:WP_015253854.1
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: protein motif:HMM:NF012780.2
GO:0032559 - adenyl ribonucleotide binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF015649.2
BTAD domain-containing putative transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013613986.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO:0009060 - aerobic respiration [Evidence IEA]
cbb3-type cytochrome c oxidase subunit I
COORDINATES: protein motif:HMM:NF012344.2
COORDINATES: protein motif:HMM:NF012264.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019586673.1
COORDINATES: similar to AA sequence:RefSeq:WP_019586672.1
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012694863.1
COORDINATES: similar to AA sequence:RefSeq:WP_014881664.1
COORDINATES: similar to AA sequence:RefSeq:WP_014684185.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015231572.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018115995.1
COORDINATES: similar to AA sequence:RefSeq:WP_019014030.1
GO:0008677 - 2-dehydropantoate 2-reductase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012694873.1
COORDINATES: similar to AA sequence:RefSeq:WP_012694874.1
COORDINATES: similar to AA sequence:RefSeq:WP_012694870.1
GO:0004181 - metallocarboxypeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015231565.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_006311984.1
COORDINATES: similar to AA sequence:RefSeq:WP_019587708.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012332137.1
COORDINATES: similar to AA sequence:RefSeq:WP_009753774.1
COORDINATES: similar to AA sequence:RefSeq:WP_011391473.1
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_018182957.1
COORDINATES: similar to AA sequence:RefSeq:WP_013159629.1
COORDINATES: similar to AA sequence:RefSeq:WP_013006172.1
GO:0016812 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006510502.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012694882.1
COORDINATES: similar to AA sequence:RefSeq:WP_019586661.1
COORDINATES: similar to AA sequence:RefSeq:WP_019586660.1
COORDINATES: similar to AA sequence:RefSeq:WP_006326187.1
COORDINATES: similar to AA sequence:RefSeq:WP_019586658.1
COORDINATES: similar to AA sequence:RefSeq:WP_018467108.1
GO:0016861 - intramolecular oxidoreductase activity, interconverting aldoses and ketoses [Evidence IEA]
GO:0019310 - inositol catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013703735.1
GO:0050112 - inositol 2-dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015235165.1
GO:0047590 - 5-dehydro-2-deoxygluconokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014511064.1
COORDINATES: similar to AA sequence:RefSeq:WP_015235164.1
GO:0016823 - hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)
COORDINATES: similar to AA sequence:RefSeq:WP_011529765.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0006470 - protein dephosphorylation [Evidence IEA]; GO:0006468 - protein phosphorylation [Evidence IEA]
pyruvate, water dikinase regulatory protein
COORDINATES: similar to AA sequence:RefSeq:WP_010888362.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008986 - pyruvate, water dikinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012692392.1
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: similar to AA sequence:RefSeq:WP_017871948.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015354420.1
COORDINATES: similar to AA sequence:RefSeq:WP_019011813.1
metal-sensitive transcriptional regulator
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611701.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012811433.1
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019587704.1
COORDINATES: similar to AA sequence:RefSeq:WP_019587703.1
COORDINATES: protein motif:HMM:NF012706.2
COORDINATES: similar to AA sequence:RefSeq:WP_015231270.1
COORDINATES: similar to AA sequence:RefSeq:WP_012873765.1
COORDINATES: protein motif:HMM:NF024583.2
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: similar to AA sequence:RefSeq:WP_012694713.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_015235154.1
COORDINATES: similar to AA sequence:RefSeq:WP_013013708.1
COORDINATES: similar to AA sequence:RefSeq:WP_010106832.1
COORDINATES: protein motif:HMM:NF018190.2
GO:0030246 - carbohydrate binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0016052 - carbohydrate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012694833.1
COORDINATES: similar to AA sequence:RefSeq:WP_019011738.1
COORDINATES: similar to AA sequence:RefSeq:WP_014684361.1
COORDINATES: similar to AA sequence:RefSeq:WP_015235078.1
COORDINATES: similar to AA sequence:RefSeq:WP_015231347.1
COORDINATES: similar to AA sequence:RefSeq:WP_015231348.1
COORDINATES: similar to AA sequence:RefSeq:WP_012695053.1
COORDINATES: similar to AA sequence:RefSeq:WP_015231350.1
COORDINATES: protein motif:HMM:NF013694.2
magnesium transporter CorA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011525731.1
GO:0031004 - potassium ion-transporting ATPase complex [Evidence IEA]
GO:0008556 - P-type potassium transmembrane transporter activity [Evidence IEA]
GO:0006813 - potassium ion transport [Evidence IEA]
potassium-transporting ATPase subunit KdpB
COORDINATES: similar to AA sequence:RefSeq:WP_010883954.1
potassium-transporting ATPase subunit KdpA
COORDINATES: similar to AA sequence:RefSeq:WP_010883955.1
potassium-transporting ATPase subunit KdpC
GO:0052621 - diguanylate cyclase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
sensor domain-containing diguanylate cyclase
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:TIGR01879.1
COORDINATES: similar to AA sequence:RefSeq:WP_012694722.1
COORDINATES: protein motif:HMM:NF012766.2
COORDINATES: similar to AA sequence:RefSeq:WP_003388128.1
COORDINATES: protein motif:HMM:NF013757.2
COORDINATES: similar to AA sequence:RefSeq:WP_014695571.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015235548.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0009381 - excinuclease ABC activity [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF024975.2
COORDINATES: similar to AA sequence:RefSeq:WP_017870737.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013159019.1
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019011811.1
COORDINATES: similar to AA sequence:RefSeq:WP_015234916.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018465555.1
YeeE/YedE thiosulfate transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015234914.1
COORDINATES: similar to AA sequence:RefSeq:WP_013613965.1
COORDINATES: similar to AA sequence:RefSeq:WP_011525860.1
COORDINATES: similar to AA sequence:RefSeq:WP_014684220.1
ankyrin repeat domain-containing protein
COORDINATES: protein motif:HMM:NF015862.2
COORDINATES: similar to AA sequence:RefSeq:WP_012747894.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012692433.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558146.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558147.1
COORDINATES: similar to AA sequence:RefSeq:WP_011531149.1
COORDINATES: similar to AA sequence:RefSeq:WP_006205658.1
COORDINATES: similar to AA sequence:RefSeq:WP_013557685.1
GO:0003858 - 3-hydroxybutyrate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012693568.1
COORDINATES: similar to AA sequence:RefSeq:WP_011529942.1
COORDINATES: similar to AA sequence:RefSeq:WP_012693555.1
COORDINATES: similar to AA sequence:RefSeq:WP_012693556.1
COORDINATES: similar to AA sequence:RefSeq:WP_012693557.1
COORDINATES: similar to AA sequence:RefSeq:WP_011529946.1
COORDINATES: similar to AA sequence:RefSeq:WP_019011536.1
COORDINATES: similar to AA sequence:RefSeq:WP_012693559.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611121.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014618373.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]; GO:0003959 - NADPH dehydrogenase activity [Evidence IEA]
bifunctional salicylyl-CoA 5-hydroxylase/oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_018007839.1
COORDINATES: similar to AA sequence:RefSeq:WP_012353966.1
COORDINATES: similar to AA sequence:RefSeq:WP_013744549.1
COORDINATES: similar to AA sequence:RefSeq:WP_009240249.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009240250.1
COORDINATES: similar to AA sequence:RefSeq:WP_013415034.1
COORDINATES: similar to AA sequence:RefSeq:WP_017833451.1
COORDINATES: similar to AA sequence:RefSeq:WP_007010714.1
COORDINATES: protein motif:HMM:NF014164.2
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: protein motif:HMM:NF012488.2
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: protein motif:HMM:NF024307.2
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008129296.1
COORDINATES: similar to AA sequence:RefSeq:WP_013567596.1
COORDINATES: similar to AA sequence:RefSeq:WP_017872025.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612364.1
COORDINATES: similar to AA sequence:RefSeq:WP_015234576.1
COORDINATES: similar to AA sequence:RefSeq:WP_019586421.1
prolyl oligopeptidase family serine peptidase
COORDINATES: protein motif:HMM:NF013539.2
MurR/RpiR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_015237312.1
COORDINATES: protein motif:HMM:NF012387.2
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
GO:0000413 - protein peptidyl-prolyl isomerization [Evidence IEA]
COORDINATES: protein motif:HMM:NF021637.2
COORDINATES: similar to AA sequence:RefSeq:WP_014686416.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013558332.1
COORDINATES: similar to AA sequence:RefSeq:WP_007035217.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014442559.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012455.2
GO:0015267 - channel activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019587742.1
DNA starvation/stationary phase protection protein
COORDINATES: similar to AA sequence:RefSeq:WP_015245139.1
GO:0005384 - manganese ion transmembrane transporter activity [Evidence IEA]
GO:0030026 - cellular manganese ion homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014695785.1
GO:0008939 - nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015236102.1
GO:0043752 - adenosylcobinamide kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013557247.1
COORDINATES: similar to AA sequence:RefSeq:WP_013557248.1
GO:0051073 - adenosylcobinamide-GDP ribazoletransferase activity [Evidence IEA]; GO:0008818 - cobalamin 5'-phosphate synthase activity [Evidence IEA]
adenosylcobinamide-GDP ribazoletransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013557245.1
COORDINATES: similar to AA sequence:RefSeq:WP_012695297.1
GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011525704.1
GO:0016880 - acid-ammonia (or amide) ligase activity [Evidence IEA]
adenosylcobinamide-phosphate synthase CbiB
COORDINATES: similar to AA sequence:RefSeq:WP_012695312.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014695787.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013457661.1
COORDINATES: similar to AA sequence:RefSeq:WP_013364642.1
GO:0071518 - autoinducer-2 kinase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0009372 - quorum sensing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010886905.1
COORDINATES: similar to AA sequence:RefSeq:WP_006725137.1
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009209351.1
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015183052.1
COORDINATES: similar to AA sequence:RefSeq:WP_011565670.1
GO:0004157 - dihydropyrimidinase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024752.2
COORDINATES: similar to AA sequence:RefSeq:WP_019587770.1
COORDINATES: similar to AA sequence:RefSeq:WP_015231441.1
serine hydrolase domain-containing protein
COORDINATES: protein motif:HMM:NF039515.1
COORDINATES: protein motif:HMM:NF015406.2
COORDINATES: similar to AA sequence:RefSeq:WP_019010045.1
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: similar to AA sequence:RefSeq:WP_012695000.1
COORDINATES: similar to AA sequence:RefSeq:WP_015697327.1
COORDINATES: similar to AA sequence:RefSeq:WP_018153114.1
COORDINATES: similar to AA sequence:RefSeq:WP_012695015.1
COORDINATES: similar to AA sequence:RefSeq:WP_012695016.1
COORDINATES: similar to AA sequence:RefSeq:WP_013159043.1
COORDINATES: similar to AA sequence:RefSeq:WP_009493203.1
COORDINATES: similar to AA sequence:RefSeq:WP_012695019.1
COORDINATES: similar to AA sequence:RefSeq:WP_019588695.1
COORDINATES: protein motif:HMM:NF013736.2
COORDINATES: similar to AA sequence:RefSeq:WP_018467782.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012575.2
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020720054.1
COORDINATES: similar to AA sequence:RefSeq:WP_013665963.1
molybdopterin oxidoreductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013156797.1
COORDINATES: similar to AA sequence:RefSeq:WP_010889526.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612053.1
COORDINATES: similar to AA sequence:RefSeq:WP_014686732.1
COORDINATES: similar to AA sequence:RefSeq:WP_014686733.1
COORDINATES: protein motif:HMM:NF013077.2
LuxR C-terminal-related transcriptional regulator
COORDINATES: protein motif:HMM:NF040138.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014695455.1
COORDINATES: similar to AA sequence:RefSeq:WP_018507390.1
COORDINATES: similar to AA sequence:RefSeq:WP_019586448.1
COORDINATES: similar to AA sequence:RefSeq:WP_013623161.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014893.2
COORDINATES: similar to AA sequence:RefSeq:WP_006718751.1
COORDINATES: similar to AA sequence:RefSeq:WP_012694929.1
COORDINATES: similar to AA sequence:RefSeq:WP_012694928.1
COORDINATES: similar to AA sequence:RefSeq:WP_012694927.1
COORDINATES: similar to AA sequence:RefSeq:WP_005588982.1
COORDINATES: similar to AA sequence:RefSeq:WP_009492125.1
COORDINATES: similar to AA sequence:RefSeq:WP_011525661.1
N-acetylmannosamine-6-phosphate 2-epimerase
COORDINATES: similar to AA sequence:RefSeq:WP_011530473.1
COORDINATES: similar to AA sequence:RefSeq:WP_017871639.1
COORDINATES: similar to AA sequence:RefSeq:WP_011525942.1
GO:0097367 - carbohydrate derivative binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF037015.2
COORDINATES: similar to AA sequence:RefSeq:WP_013622932.1
GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014686913.1
COORDINATES: similar to AA sequence:RefSeq:WP_014686912.1
COORDINATES: similar to AA sequence:RefSeq:WP_008733841.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_012173261.1
COORDINATES: similar to AA sequence:RefSeq:WP_006762649.1
type II toxin-antitoxin system prevent-host-death family antitoxin
COORDINATES: protein motif:HMM:NF013970.2
COORDINATES: protein motif:HMM:NF016167.2
COORDINATES: protein motif:HMM:NF024883.2
COORDINATES: similar to AA sequence:RefSeq:WP_019082511.1
COORDINATES: similar to AA sequence:RefSeq:WP_014618755.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
threo-3-hydroxy-L-aspartate ammonia-lyase
COORDINATES: similar to AA sequence:RefSeq:WP_019011994.1
GO:0004497 - monooxygenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010887136.1
GO:0019172 - glyoxalase III activity [Evidence IEA]
type 1 glutamine amidotransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017870321.1
COORDINATES: similar to AA sequence:RefSeq:WP_019011930.1
COORDINATES: protein motif:HMM:NF028132.2
COORDINATES: similar to AA sequence:RefSeq:WP_019011361.1
COORDINATES: similar to AA sequence:RefSeq:WP_012699741.1
COORDINATES: similar to AA sequence:RefSeq:WP_019587310.1
GO:0042121 - alginic acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015234441.1
COORDINATES: similar to AA sequence:RefSeq:WP_017653292.1
COORDINATES: similar to AA sequence:RefSeq:WP_015234439.1