Candidatus Cardinium hertigii strain cHgTN10 chromosome, complete genome.
type: Entry
definition: Candidatus Cardinium hertigii strain cHgTN10 chromosome, complete genome.
sequence version: NZ_CP029619.1
sequence date: 2023-03-26
sequence: sequence
division: CON
label: NZ_CP029619.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN09237133
keyword: RefSeq
source: Candidatus Cardinium hertigii
organism: Candidatus Cardinium hertigii
taxonomy: Bacteria; Bacteroidota; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Cardinium.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP029619.1.\nAnnotated using prokka 1.13 from\nhttps://github.com/tseemann/prokka.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 2018\nAssembly Method :: Canu v. 1.4\nAssembly Name :: cHgTN10v1\nExpected Final Version :: no\nGenome Coverage :: 30.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/25/2023 21:05:33\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 989\nCDSs (total) :: 947\nGenes (coding) :: 915\nCDSs (with protein) :: 915\nGenes (RNA) :: 42\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 37\nncRNAs :: 2\nPseudo Genes (total) :: 32\nCDSs (without protein) :: 32\nPseudo Genes (ambiguous residues) :: 0 of 32\nPseudo Genes (frameshifted) :: 18 of 32\nPseudo Genes (incomplete) :: 26 of 32\nPseudo Genes (internal stop) :: 12 of 32\nPseudo Genes (multiple problems) :: 19 of 32\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000340
sequence length: 1193042
topology: circular
so has quality: SO_0000988
location: 1..1193042
location: region:1-1193042:1
RO_0002162: 247481

NZ_CP029619
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN09237133
type: BioSample
SIO_000068: biosample

1
title: Candidatus Cardinium hertigii Genome Assembly
author: Showmaker, K.C.
author: Walden, K.O.
author: Fields, C.J.
author: Lambert, K.N.
author: Hudson, M.E.
journal: Unpublished

2
title: Direct Submission
author: Showmaker, K.C.
author: Walden, K.O.
author: Fields, C.J.
author: Lambert, K.N.
author: Hudson, M.E.
journal: Submitted (24-MAY-2018) Crop Science, University of Illinois, 1102 S Goodwin Ave, Urbana, IL 61801, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1193042:1
position: 1193042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-1193042:1:source
so part of: sequence
organism: Candidatus Cardinium hertigii
mol type: genomic DNA
strain: cHgTN10
host: Heterodera glycines
country: USA
collection date: 2015

247481
type: Taxonomy
SIO_000068: taxonomy

DK880_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: dnaA
locus tag: DK880_RS00005
old locus tag: DK880_00001
so part of: sequence
location: 1..1380
location: region:1-1380:1
so has part: feature:1-1380:1:exon
subclass of: SO_0000010

position:1380:1
position: 1380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1380:1:exon

DK880_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: dnaA
locus tag: DK880_RS00005
old locus tag: DK880_00001
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009583654.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosomal replication initiator protein DnaA
translation: MHTESKVIWDRCLLYIRNQVSEQTYQTWFTPIVAKHFKDNVLTIQVPSQFFYEWLEEHHLSLLKQAVRQELGPTGKLAYAVVIDKGNKRQKPLLINLPTYPGPAPRSIPALASNNELLQLNPNYLFDNLIEGSCNQLAKSAAQAVAKQPGETAFNPLMIYGGVGLGKTHIAQAIGHAVQSAFPDKKIVYTASEKLTAQFIEALRGNQIHSFTAQYLTVDLFILDDIQFLSGKEKTQEFFFHIFNHLHQLKKQIVITSDAAPRNLKGLQERLLSRFKWGLTADLQRPDFETRVAIIESKMIADGITFPSDLIYYIAQHVDTNVRELEGVLISLMAHASLGKQDLNVALAQQVLKHIVQHAPTVEATIESIQQKVAASYPISLEALTSKSRKKENVAARQVAMHLIKKYTAHSLKSIGAYFGGRDHTTVMHALQVVEERLQTDAHYARLYAAIEEKIKCKQ
SIO_010081: DK880_RS00005
subclass of: SO_0000673
so part of: DK880_RS00005
location: 1..1380
location: region:1-1380:1
so has part: feature:1-1380:1:exon

WP_109996813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-1380:1:exon

DK880_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00010
old locus tag: DK880_00002
so part of: sequence
location: 2010..3149
location: region:2010-3149:1
so has part: feature:2010-3149:1:exon
subclass of: SO_0000010

position:2010:1
position: 2010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3149:1
position: 3149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2010-3149:1:exon

DK880_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00010
old locus tag: DK880_00002
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNNQDYCSKKVIVVRLFSYLLFCGHSCSSPSIRNSQRFVSNALPSKIAGEAVAVGTTVSTGKSLPLPPSTPVSSIQPSGILLNKAGKSADRCSVYPASPAPKVLFHHIAVGPAGAAVSTGNNEFLSELPLVEKKKELLLKEIENKNEREGVIQKKGPTLPPKPTQSDVTPSKRRTEGLLSSTSNSASPISRLSKENADLQAELIKAMYKRRNDSGYDDSEDDSEDDSEDDSEDVSLVAMKATESGLDNGNQVKNGVISSKTGAGGASSSQVARVVQGRSSTSNSAPPINAVLNEQINNLLSDIQEGKSLKKTRRWKVKENGEVEFVKETQPSEGDSVKEPQPSEENAMKKMKKTIKKMPSSSDEEDPEEEKLRDEREWD
SIO_010081: DK880_RS00010
subclass of: SO_0000673
so part of: DK880_RS00010
location: 2010..3149
location: region:2010-3149:1
so has part: feature:2010-3149:1:exon

WP_109996814.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2010-3149:1:exon

DK880_RS05050
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05050
old locus tag: DK880_00003
so part of: sequence
location: 3521..4618
location: region:3521-4618:1
so has part: feature:3521-4618:1:exon
subclass of: SO_0000010

position:3521:1
position: 3521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4618:1
position: 4618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3521-4618:1:exon

DK880_RS05050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05050
old locus tag: DK880_00003
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNNQDYYNKKKAITVCLFSHLLLYADACSAPAVNKNVLRTDPPPSIVVGPVKTVVSTENSVPPSPPSPPSSVPPSSTSSVQSPNPCLSASRGSASAQSASVYPNNPPHLPLINNTLSSSPPADLNLHHCNCKGRNGSTPIAPPPSSSTSSECLSTGEESISLSLSDVNNNVSSVSLPPPQPVPLILPPPPPSSLIPSPPPPPSPDQLRVTKPVIVRIKKTTTGASGTPESIPNTGDQIKKNSLFLQSIGKEAKVSADKARVSANEAKKSAEAATEVAGTVSAEAAEAAEAAEAAAKAAEAAAKAETEAAKAAAAAEEAKEAADEAAATKARNAANEAAEAAAEAAEAAAKAAAKAAEAAAKAEST
SIO_010081: DK880_RS05050
subclass of: SO_0000673
so part of: DK880_RS05050
location: 3521..4618
location: region:3521-4618:1
so has part: feature:3521-4618:1:exon

WP_162534041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3521-4618:1:exon

DK880_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00020
old locus tag: DK880_00004
so part of: sequence
location: 4842..5045
location: region:4842-5045:1
so has part: feature:4842-5045:1:exon
subclass of: SO_0000010

position:4842:1
position: 4842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5045:1
position: 5045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4842-5045:1:exon

DK880_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00020
old locus tag: DK880_00004
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSIIVMPFRKVKLKKVVLQNKGCETGNEGSKNSVAVKLMDRVKEHFQGYTEEDNSSNEEPIRPDSE
SIO_010081: DK880_RS00020
subclass of: SO_0000673
so part of: DK880_RS00020
location: 4842..5045
location: region:4842-5045:1
so has part: feature:4842-5045:1:exon

WP_162534042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4842-5045:1:exon

DK880_RS05055
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05055
old locus tag: DK880_00006
so part of: sequence
location: 5392..6531
location: region:5392-6531:1
so has part: feature:5392-6531:1:exon
subclass of: SO_0000010

position:5392:1
position: 5392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6531:1
position: 6531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5392-6531:1:exon

DK880_RS05055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05055
old locus tag: DK880_00006
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNSKNFFNKKTVTICLFSHLLLYADSCSSSSTKNSKRSSPPLFTPPPPLFTPPTSPTSTSKPSPSEVNKCSGGGSASPSSSVLKEPPTASVHPPLSTNAAVSIGNAEASSFTPSSNSLEGESSHMQENGGSGSNSLSKQLASIGGAKANITPTPKGDPTASVHPPLSTNAAVSIENAEPSSSTPSSNSLERESSHMQENGGSGSNSLSKQLVPIDGAKANITPTPKGEPTASVDPPLSTNAAVLIENAEPSSSTSSSESSLNDNEDNEKVSGEDEMEKAASPNTITKPKRTSWLKENKSVSSEDTLKSSCGTAKGEKIDKQAVKKQEKAAKQEREKQEKAAKQEREKQEKAAKQEREKQEKIDKEAEKAAKKKEKKKKK
SIO_010081: DK880_RS05055
subclass of: SO_0000673
so part of: DK880_RS05055
location: 5392..6531
location: region:5392-6531:1
so has part: feature:5392-6531:1:exon

WP_162534043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5392-6531:1:exon

DK880_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00035
old locus tag: DK880_00007
so part of: sequence
location: 6955..8271
location: region:6955-8271:1
so has part: feature:6955-8271:1:exon
subclass of: SO_0000010

position:6955:1
position: 6955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8271:1
position: 8271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6955-8271:1:exon

DK880_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00035
old locus tag: DK880_00007
inference: COORDINATES: protein motif:HMM:NF006927.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anaerobic C4-dicarboxylate transporter family protein
translation: MFLVGLGILLLALFLGSRLQGMSMSMIGSLGILSYMLLFNAVPADPPFPVILCIAAVLTAVGTVEAAGGLHYLVQLAESCIRKYPQRILYISPAVTYVITFLGGTNHIAYSILPVIAEVSKEIGIRPERPLSLSVIAAMHGALASPISAIMATLTGFLTGYGIDMVTICKILIPSTMGGIGIAACLISQLSSKMPAMPAAVENKTAAPTTPVNPSSLACSNRKMAQGSILLFVLGSLSILFISSFKTLRPTWEVNAIQLPLSDEVLLSLMMLSTACLIMLIYRISPKSIIQGKAFMTGVQGMFSLLGTAWLSSTFVKCNQEVLLRFVERYLSEPWQFSIMLLLMSALMGSSAATIKALFPLGLLLQIPPKILLASVIAVNGIFIIPIYPTILAAIQLDTTGSTRIGRFLFNHSFMLPGCITVVAAVCIAFALVATGIV
SIO_010081: DK880_RS00035
subclass of: SO_0000673
so part of: DK880_RS00035
location: 6955..8271
location: region:6955-8271:1
so has part: feature:6955-8271:1:exon

WP_109996819.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6955-8271:1:exon

DK880_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00040
old locus tag: DK880_00008
so part of: sequence
location: 8359..11049
location: region:8359-11049:1
so has part: feature:8359-11049:1:exon
subclass of: SO_0000010

position:8359:1
position: 8359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11049:1
position: 11049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8359-11049:1:exon

DK880_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00040
old locus tag: DK880_00008
inference: COORDINATES: protein motif:HMM:NF012789.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UvrD-helicase domain-containing protein
translation: MPMAALLLYRASAGAGKTHTLVTQYIKWALCDTAAFEHILAVTFTNQATREMKQRIMTALHSLANGEATALQKELFHMGWTHEPLQVRSRELLSRMVYQYESFAVTTIDSFFYKIVQSFSEELCLQQHFAVEMDEALALEESVALLLQSDLPLLQKWLVDFALENLLAGKRWHIAAQLQQLGKTLYKESFKLHEKALLAALEQEDVLPYFLADLQSNLLLFEEKMQKTGKKALALLEQEKLAPEDFSYGNKGIIGYFRKIAHTKDFAPTKRALLAATAVASWIPKRTTKNEQLTRVITDALHPLLVEAIALYDTEGIRYRTAIAVARFVYSFGLMAALLKELEQYRRRHNVLFLSDIATLLYQFIQENDTPFLYERIGNKFHHFLIDEFQDLSLFQWVNIKPLLLNSLAQGYDNLLVGDVKQSIYRWRGSDWRLLNHQVEAAFEGTKVHALRTNRRSHKAIVSFNNTFFSAAADQLMRYLEVTLSSAKEAAAPLRYEWEQMKRVYGDIAQQLLPTTQQGGYVELLLFKSHPLDTLSKERPNGQLRVQKEMIHLLKKLKNRSIAAKDIVLLVRNNREAALVEELCRGLYAARDGYMPAQARSLVWDHVAVKVIIYALYYLNSAEELMHKIALIQTYSNYIGQEPINWHHYIGRGREVTAIAVVLPKTFWDQKAFLQSLPLYACVELLIKILFAEEEAYNAVLAFFQGMVLDYCHTAATDTLQAFLSWWEKRGKTFPLPVNSDEDMLQIMTIHQAKGLEFKIVIIPFCNWNLDHIPQKGPLLWCAPYQQAPFHYFPVLPLHYSEMLKATYYAQDYYLEHMQAHLDNFNLLYVAFTRAKEQLYVMAPLPEQEGKLLTTADLIYRSLVACPTDKSGGLSVVETLAATVEETPIGIRFCLG
SIO_010081: DK880_RS00040
subclass of: SO_0000673
so part of: DK880_RS00040
location: 8359..11049
location: region:8359-11049:1
so has part: feature:8359-11049:1:exon

WP_109996820.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8359-11049:1:exon

DK880_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00045
old locus tag: DK880_00009
so part of: sequence
location: 11130..11699
location: region:11130-11699:1
so has part: feature:11130-11699:1:exon
subclass of: SO_0000010

position:11130:1
position: 11130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11699:1
position: 11699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11130-11699:1:exon

DK880_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00045
old locus tag: DK880_00009
inference: COORDINATES: protein motif:HMM:TIGR01459.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR01459 family HAD-type hydrolase
translation: MWGVIVEGTQTYPGVVEHINYITKHNKQVFFVYNAPVRRSALLFMLQSWHLAVNEEQIITAGSVAAHMIVNSANLWGVRYPFIYHLLEDINYLMDAEQIMLTTNIHKADLLLLTLYCDQTADLDLNQWDPVLETASIRKIPILGACPDIGIMQQGVYRYCAGYFAEKVKQWGERLSMQENLILLYTNVS
SIO_010081: DK880_RS00045
subclass of: SO_0000673
so part of: DK880_RS00045
location: 11130..11699
location: region:11130-11699:1
so has part: feature:11130-11699:1:exon

WP_262494597.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11130-11699:1:exon

DK880_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00050
old locus tag: DK880_00010
so part of: sequence
location: 11639..11923
location: region:11639-11923:1
so has part: feature:11639-11923:1:exon
subclass of: SO_0000010

position:11639:1
position: 11639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11923:1
position: 11923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11639-11923:1:exon

DK880_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00050
old locus tag: DK880_00010
inference: COORDINATES: protein motif:HMM:NF024811.2
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
GO process: GO:0008152 - metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAD-IA family hydrolase
translation: MGGEVIYAGKPYPAIYQRVLDQLPGIPKKRILMIGDTLSTDILGANQIGIDLALVLTGNATIVHNQFHSLEDKLIQLAKATQNITLHCIIQLGD
SIO_010081: DK880_RS00050
subclass of: SO_0000673
so part of: DK880_RS00050
location: 11639..11923
location: region:11639-11923:1
so has part: feature:11639-11923:1:exon

WP_109996822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11639-11923:1:exon

DK880_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00055
old locus tag: DK880_00012
so part of: sequence
location: complement(12263..13813)
location: region:12263-13813:-1
so has part: feature:12263-13813:-1:exon
subclass of: SO_0000010

position:12263:-1
position: 12263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13813:-1
position: 13813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12263-13813:-1:exon

DK880_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00055
old locus tag: DK880_00012
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:solute symporter family protein
translation: MTLFNNLPLVMVMAFLLLTLVVGLYYSRRVTTFREYAIGNKQFATATLVATLLATDFGGGGLLRCVEETYIQGFSWILFFLSTALGYWLLSPLLLRMGPFMQHLSLAESIGSVYGNKPRFITALSSIVCHIFYLAAQIIAMETAIKQCIGLSDSGNIEAMQKTVTVIAAFILITYSMFGGIRSVTFTDVLQFITFTAIIPLLVWFIFKITNKSMVQVISILHKEPKFQLNSCLYMDKLLGIAALFLTNLTTFIDPITIQRIYMASSPIQARKLFLYSSTFAMVIKGFITLIALLLFVKMPTLYKDQVWPYIFETLPVIFKGLIAISILAMAMSTADSMLNIGSIMVSHDIVGNIQTTKVLTDKHKLVLARLTVLIIGVCALLLVFWKRDLLSLLYLAFDFSVPIITAPFLLSVYGFRGSSRTALIGMATGIVAILAWNRCVEPITAINGAFPSMLANGLAMLAAHYLLPHPAGTGWVPPDKIYQQRQQEKARIARRSKQERDGIPSIKRMYCKEII
SIO_010081: DK880_RS00055
subclass of: SO_0000673
so part of: DK880_RS00055
location: complement(12263..13813)
location: region:12263-13813:-1
so has part: feature:12263-13813:-1:exon

WP_109996823.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12263-13813:-1:exon

DK880_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00060
old locus tag: DK880_00013
so part of: sequence
location: complement(14070..17615)
location: region:14070-17615:-1
so has part: feature:14070-17615:-1:exon
subclass of: SO_0000010

position:14070:-1
position: 14070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17615:-1
position: 17615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14070-17615:-1:exon

DK880_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00060
old locus tag: DK880_00013
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MIALLYHNVPLLMVIAFLLLTLAVGIYFHKKTTTLREYAVGNKKFATAALVATMLATKFGGDDMPLDVEEIHSRGIDWIFIALSTSLPFLLLSRLVLRMGPFMQHLSMPETIGSVYGTYPRIVTALSCICNSIAGISIQITVISKAIAMCMQSCAPQTIQYLTLFTTFVLIFYSCFGGISSVTFTDVLQFITFTLIIPFLAIFMIQKIDKPFADTIPFLQSQTQFQLSSLFHCNTSLISIISMALSLLVVYMEHSNIQRIYMASDVIQAQRVCRYVSIFSLIITICTILIGIAAFIAAPTLPSTEIWTYIMQHIPPFFKGFLAISLLAMSMSTADSDLNACSVIVSHDVYASLQNIRRMPVISPLLLARCTTVIVGLTAMFLAFKHNNLLELLCLVIDFFVPIVTAPFLLAVYGFRGSSRTALIGMATGIGTILAWNRWIEPTTGINGAFLCMLANGLAMLAAHYLLPQPVGTGWVPPDKIYLQKQQEKQRIAKRNKKERAIFFTKEHLAKLKPNAITTVFVGVYLIITSLVSSCYYNGQTKTVWACIPFFMLGVAHIGYVAFFANKISDRAIGICWFFSLLVGFPLHLLFSCFLCQTLLVPFLLFFTHGTVLLWTLPFYWSLRALAITAGGMLIAICCCKATVICPSLTLLLSILGFGLLLLMISVWAKNSIIQKESRNLYFLQKQATQEAYELKKLAYSEELPIASSQSTLAQEGTILEKAIQNVTQSIAFVDSTTPFLKEDFQSILDKFAEWAYYLKQRAKRQDQLLLQPTAIPLEALIDAGEVAYQKEKGYLPGLWIEESVNIPDTLLGDREQLVRLLFLALNHVRQSSVSFRSTITLQLQSTQLRYKKREPLEEKESPDCITFPALALVVHTENKQIPLPILQTIYDVEGPAVTQPVVSALSPQKVNLHKEKLASIVYAHYGLLLWPHAEQLVCLLPLDVTQVREEMLALSLPREAGTQEEASITPHEKTASLAQLSAFHDWVRSFESIDSFLIAEILLLLRRCYGFKRHASGQLFYVRAVAIAEWVAAWTDGHAKLVYATLLYDLVRYTRLPLSYIKANYPLIVYCFVENTIAIDSRKRLEESLLAIVNRFKESLQKEHISVLYVKLAERLYDLKHAFGYKDPAVVQAMAKESLTIDVELAQRYGEPGMAILLKQAAEEALAGNKPTEPEGGMKP
SIO_010081: DK880_RS00060
subclass of: SO_0000673
so part of: DK880_RS00060
location: complement(14070..17615)
location: region:14070-17615:-1
so has part: feature:14070-17615:-1:exon

WP_162534044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14070-17615:-1:exon

DK880_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00070
old locus tag: DK880_00015
so part of: sequence
location: complement(18374..21904)
location: region:18374-21904:-1
so has part: feature:18374-21904:-1:exon
subclass of: SO_0000010

position:18374:-1
position: 18374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21904:-1
position: 21904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18374-21904:-1:exon

DK880_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00070
old locus tag: DK880_00015
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:solute symporter family protein
translation: MTLWNNLPLVMTVTFLLLTLAVGLYYSRKVTTLREYAVGNKDFTTAALVATMLATAYGGGGLVRTVECIHYFGLYWIVKSLFSGFGIWMLNPLALRMESFMQHLSMPETVGSVFGKWPRILTALSTICTYVASFAIQTNIVARSFAMCLNLEEHSMHTIVATIILITYSTSGGIRSVTFTDVLQFLTFAIVIPFLAFFMFKQTGKSVTEIITLLQKEEKFRLSTVFHFDKKLLIMIGLFLAGLMSYVTPTAIQRAYMCATPRQANNVFFYTGILYFIIKFTIVILAITTFISDPSLSQNNVWHYIMGHIPPFFKGLVAISLLAMAMSTADSKLNVCAVIVSHDIMGSFQHYAIFRKFFSRHSLALTRVTSIIVGIFGMMVALKYKNLLHLLQLTFAFSLPVITAPYVLAIYGLRSSSRTALIGMITGIFSILAWHKWIKPIAAVDGSFFCMLANGLAMLAAHYLLPQPAGSGWVPPDKIYLQRQQEKERIAKRNKKERAIFFTKENLAKLKPNAITTVFVGVYLIITSLVSSCYYNAQTKTVWQCLPFYMLGVGYIGYVAFLKENNKISDWTIGKYWFISVLVGFPLHLLFSCFLCQTLLVPFLLFFTHGTVLLWTLPFYWSLRALAITAGGMLIAICCCKATVVWPDPMIVLPLVGVGSFLVMSVVYLKKQNRIQQERVAYFLQKQATQEAYELKKLAYSEELPTASPQNTLAQEGTILEKAIQNVTQSIAFVDSTTPFLKEDFQSILDKFAEWAFYLKQRAKRQDQLLLQPTAIPLVELIDAGEVVYQKEKGYLPRLWIEEAVNIPDTMLGDREQLVRLLFLAFSYVKQSSVSPRSLITLQLQPTQLRYKKREPLEADGAPDCISFPALALVLRTENKNIPLSTLQAIYDVEDASTTQPMDPFVSPQMVNLRKENLASIVHAHYGLLLLPHAEQLVCLLPLDVTQVREEMLALSLPREAGTQEEASITPHEKTASLATLSSFHDWIPSFESIDPFLIAEVLLLLRRCYGFKRHASGQLFYVRAVGIAEWVAAWTDGHAKLVYATLLYDLVRYTRLPLSYIKGNYNMGVYCFVENVIAIDSRERLEESLLAITNRLKESLQKEHISVLYVKLAERLYDLKQASGYKDPAVVQAMAKESLTIDVELAQRYGEPGMAILLKQAAEEVLAGNKPTEPV
SIO_010081: DK880_RS00070
subclass of: SO_0000673
so part of: DK880_RS00070
location: complement(18374..21904)
location: region:18374-21904:-1
so has part: feature:18374-21904:-1:exon

WP_109996825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18374-21904:-1:exon

DK880_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00075
pseudo: true
so part of: sequence
location: complement(<22489..>22888)
location: region:22489-22888:-1
so has part: feature:22489-22888:-1:exon
subclass of: SO_0000010

position:22489:-1
position: 22489
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:22888:-1
position: 22888
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22489-22888:-1:exon

DK880_RS00075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_034576516.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: DK880_RS00075
subclass of: SO_0000673
so part of: DK880_RS00075
location: complement(<22489..>22888)
location: region:22489-22888:-1
so has part: feature:22489-22888:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22489-22888:-1:exon

DK880_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00080
old locus tag: DK880_00017
so part of: sequence
location: complement(22879..23682)
location: region:22879-23682:-1
so has part: feature:22879-23682:-1:exon
subclass of: SO_0000010

position:22879:-1
position: 22879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23682:-1
position: 23682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22879-23682:-1:exon

DK880_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00080
old locus tag: DK880_00017
inference: COORDINATES: protein motif:HMM:NF019924.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycogen/starch synthase
translation: MSLQRILYVASEVAPFLETSLIASCLRKLPEAMQHKQLDVRIIVPKFGVIHDRLNRLHEVLRLSGNIVSIDAAAYAITVKVSTIPNVRLQVYFVDNEVLFGCRKAVFQDASNYFFADNDLRMIFFCMGVMETLKKLEWEADVVHCHGWITSLLPLFWKKLYQQHALFTKAKLITTLYNTTYSNHFPLLANRIEKIGISVEDMALLATGNFCNIIELAMQYSDLVLRGEMLNEAEFKKLPKAQACLLVPNDEQYSARCLALYHELLGE
SIO_010081: DK880_RS00080
subclass of: SO_0000673
so part of: DK880_RS00080
location: complement(22879..23682)
location: region:22879-23682:-1
so has part: feature:22879-23682:-1:exon

WP_109996826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22879-23682:-1:exon

DK880_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00085
old locus tag: DK880_00018
so part of: sequence
location: complement(23798..23871)
location: region:23798-23871:-1
so has part: feature:23798-23871:-1:exon
subclass of: SO_0000663

position:23798:-1
position: 23798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23871:-1
position: 23871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23798-23871:-1:exon

DK880_RS00085
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 247481
locus tag: DK880_RS00085
old locus tag: DK880_00018
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(23835..23837),aa:Arg,seq:acg)
SIO_010081: DK880_RS00085
subclass of: SO_0000673
so part of: DK880_RS00085
location: complement(23798..23871)
location: region:23798-23871:-1
so has part: feature:23798-23871:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23798-23871:-1:exon

DK880_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00090
old locus tag: DK880_00019
so part of: sequence
location: 24108..24947
location: region:24108-24947:1
so has part: feature:24108-24947:1:exon
subclass of: SO_0000010

position:24108:1
position: 24108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24947:1
position: 24947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24108-24947:1:exon

DK880_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00090
old locus tag: DK880_00019
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: outer membrane beta-barrel protein
translation: MKKKAWYWFVFCLALQGAVATPSVATTQKPVISVAQMNKASDTYQPIIEQRYFVFVLELLKKDWLHQSGKSSLGMERWSWRDFMRWPTPSLLYAVRIKKSRFAIGGGIGFSTLQYSFKSDKKENFTLRKKGKNNTEYGAIDSEDLGGDNWGLIQPSAVKYSQWNVSYMDFLLGMRFNSVLEQSREGVHVWLGGKLGVRLASATTIGYEAHDAISSLYRDNDFNLNRFAFSGQIGIGYRFVGLIGSYTFTPLFSDGVLRERDSTTCGAIKPYSVSFYLTC
SIO_010081: DK880_RS00090
subclass of: SO_0000673
so part of: DK880_RS00090
location: 24108..24947
location: region:24108-24947:1
so has part: feature:24108-24947:1:exon

WP_109996827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24108-24947:1:exon

DK880_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00095
old locus tag: DK880_00020
so part of: sequence
location: 25236..25318
location: region:25236-25318:1
so has part: feature:25236-25318:1:exon
subclass of: SO_0000663

position:25236:1
position: 25236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25318:1
position: 25318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25236-25318:1:exon

DK880_RS00095
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 247481
locus tag: DK880_RS00095
old locus tag: DK880_00020
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:25270..25272,aa:Tyr,seq:gta)
SIO_010081: DK880_RS00095
subclass of: SO_0000673
so part of: DK880_RS00095
location: 25236..25318
location: region:25236-25318:1
so has part: feature:25236-25318:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25236-25318:1:exon

DK880_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00100
old locus tag: DK880_00021
so part of: sequence
location: 25380..25452
location: region:25380-25452:1
so has part: feature:25380-25452:1:exon
subclass of: SO_0000663

position:25380:1
position: 25380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25452:1
position: 25452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25380-25452:1:exon

DK880_RS00100
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 247481
locus tag: DK880_RS00100
old locus tag: DK880_00021
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:25413..25415,aa:Gly,seq:tcc)
SIO_010081: DK880_RS00100
subclass of: SO_0000673
so part of: DK880_RS00100
location: 25380..25452
location: region:25380-25452:1
so has part: feature:25380-25452:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25380-25452:1:exon

DK880_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00105
old locus tag: DK880_00022
so part of: sequence
location: 25485..25556
location: region:25485-25556:1
so has part: feature:25485-25556:1:exon
subclass of: SO_0000663

position:25485:1
position: 25485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25556:1
position: 25556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25485-25556:1:exon

DK880_RS00105
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 247481
locus tag: DK880_RS00105
old locus tag: DK880_00022
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:25517..25519,aa:Thr,seq:ggt)
SIO_010081: DK880_RS00105
subclass of: SO_0000673
so part of: DK880_RS00105
location: 25485..25556
location: region:25485-25556:1
so has part: feature:25485-25556:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25485-25556:1:exon

DK880_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: tuf
locus tag: DK880_RS00110
old locus tag: DK880_00023
so part of: sequence
location: 25654..26841
location: region:25654-26841:1
so has part: feature:25654-26841:1:exon
subclass of: SO_0000010

position:25654:1
position: 25654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26841:1
position: 26841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25654-26841:1:exon

DK880_RS00110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: tuf
locus tag: DK880_RS00110
old locus tag: DK880_00023
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010611224.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor Tu
translation: MAKETFDRSKPHVNIGTIGHVDHGKTTLTAAITAVLSKAGLAEKKEFSSIDAAPEEKERGITINTAHVEYQTKTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLANQIGVPSIVVFLNKVDAVNDPEILELVELEVRELLSTYKFDGDNAPIIHGSALGALNGEPEAEAKIQELMNAVDGHIPLPVRLIDRDFLMPIEGTHTITGRGTVATGRIEKGVITTGSPVEIIGMGAEKLTSTVTGIEMFRKILDRGEAGDNVGLLLRGVDKDAIRRGMIICKPGSLKPHHKFKAEIYVLTEKEGGRHKPFVSKYRPQCYFRTTDVTGEIKLPDDVKMVMPGDNVNLEIALINSIAMEVGLRFAIREGGRTVGAGRVTEIIE
SIO_010081: DK880_RS00110
subclass of: SO_0000673
so part of: DK880_RS00110
location: 25654..26841
location: region:25654-26841:1
so has part: feature:25654-26841:1:exon

WP_109996828.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25654-26841:1:exon

DK880_RS00115
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00115
old locus tag: DK880_00024
so part of: sequence
location: 26914..26986
location: region:26914-26986:1
so has part: feature:26914-26986:1:exon
subclass of: SO_0000663

position:26914:1
position: 26914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26986:1
position: 26986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26914-26986:1:exon

DK880_RS00115
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 247481
locus tag: DK880_RS00115
old locus tag: DK880_00024
product: tRNA-Trp
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:26947..26949,aa:Trp,seq:cca)
SIO_010081: DK880_RS00115
subclass of: SO_0000673
so part of: DK880_RS00115
location: 26914..26986
location: region:26914-26986:1
so has part: feature:26914-26986:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26914-26986:1:exon

DK880_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: secE
locus tag: DK880_RS00120
old locus tag: DK880_00025
so part of: sequence
location: 27000..27191
location: region:27000-27191:1
so has part: feature:27000-27191:1:exon
subclass of: SO_0000010

position:27000:1
position: 27000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27191:1
position: 27191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27000-27191:1:exon

DK880_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: secE
locus tag: DK880_RS00120
old locus tag: DK880_00025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009194212.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecE
translation: MSKLKLFVQSLIQEIKYKITWPPYGKLQSNALLVLVASFIFALFIGLMDLSLREAFIWFYNAF
SIO_010081: DK880_RS00120
subclass of: SO_0000673
so part of: DK880_RS00120
location: 27000..27191
location: region:27000-27191:1
so has part: feature:27000-27191:1:exon

WP_109996829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27000-27191:1:exon

DK880_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: nusG
locus tag: DK880_RS00125
old locus tag: DK880_00026
so part of: sequence
location: 27206..27772
location: region:27206-27772:1
so has part: feature:27206-27772:1:exon
subclass of: SO_0000010

position:27206:1
position: 27206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27772:1
position: 27772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27206-27772:1:exon

DK880_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: nusG
locus tag: DK880_RS00125
old locus tag: DK880_00026
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012473439.1
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination/antitermination protein NusG
translation: MDTLQWYVLKVISKQEEKIKSSLQVELLKEGLQHRVGEVFIPYEKVYEIRAGKKTIKNRNKCPGYIFLQADLSNSLFLLMQLLRRIRGILGFLGVEGWKATDAPLPLSQVEVDRFIGKASESDPVDVKLATIFMVGEVVEIIDGPFVGFSGEIEEIFEEKKTLNVVVKIFDERSTPVELRYTQVKKLL
SIO_010081: DK880_RS00125
subclass of: SO_0000673
so part of: DK880_RS00125
location: 27206..27772
location: region:27206-27772:1
so has part: feature:27206-27772:1:exon

WP_109996830.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27206-27772:1:exon

DK880_RS00130
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rplK
locus tag: DK880_RS00130
old locus tag: DK880_00027
so part of: sequence
location: 27810..28250
location: region:27810-28250:1
so has part: feature:27810-28250:1:exon
subclass of: SO_0000010

position:27810:1
position: 27810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28250:1
position: 28250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27810-28250:1:exon

DK880_RS00130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rplK
locus tag: DK880_RS00130
old locus tag: DK880_00027
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020532676.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L11
translation: MSKPVVGYVRLRIKGGSANPAPPVGPALGSKGINIMEFCKQFNARTKEKQGELLPVVITVYQDKTFDFIVKTPPTVVSIMQLAEVSKGSSEPNRRKVARISWEKIQQIAEGKLPDLNTLDVHAAMRMVAGTARSMGITVEGNAPWA
SIO_010081: DK880_RS00130
subclass of: SO_0000673
so part of: DK880_RS00130
location: 27810..28250
location: region:27810-28250:1
so has part: feature:27810-28250:1:exon

WP_109996831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27810-28250:1:exon

DK880_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rplA
locus tag: DK880_RS00135
old locus tag: DK880_00028
so part of: sequence
location: 28276..28968
location: region:28276-28968:1
so has part: feature:28276-28968:1:exon
subclass of: SO_0000010

position:28276:1
position: 28276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28968:1
position: 28968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28276-28968:1:exon

DK880_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rplA
locus tag: DK880_RS00135
old locus tag: DK880_00028
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015812906.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L1
translation: MGRQKNKKCHTVVLSKEMHPLNKVVELVKQATSTKFDASVDVAIRLGVDPKKSDQVVRGSVSLPHGTGKPCRILVLCTADKEAEATEAGADYVGLDTYIDKIAQGWTGVDVIITMPTVMVKLGKLGAVLGPRGLMPNPKVGTVTMDVAGMVREIRAGKISFKTDKYGIVHSSVGRISFPVEKIGENIVELLKAVVRLKPSTSKGLYINSISLSSTMSKGFFIDRSIAIGL
SIO_010081: DK880_RS00135
subclass of: SO_0000673
so part of: DK880_RS00135
location: 28276..28968
location: region:28276-28968:1
so has part: feature:28276-28968:1:exon

WP_109996832.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28276-28968:1:exon

DK880_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rplJ
locus tag: DK880_RS00140
old locus tag: DK880_00029
so part of: sequence
location: 28973..29512
location: region:28973-29512:1
so has part: feature:28973-29512:1:exon
subclass of: SO_0000010

position:28973:1
position: 28973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29512:1
position: 29512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28973-29512:1:exon

DK880_RS00140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rplJ
locus tag: DK880_RS00140
old locus tag: DK880_00029
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010856305.1
GO component: GO:0015934 - large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L10
translation: MKRAEKLTVIEDLANKFTTYDCFYVVDAMGLTVAQVNKFRKSCAEQKLLYQVAKNTFIQKALERSGKGETHAPFFSKVLSGFSGILFVSEKASTPARMLKDFWVAERLHRPLLKGASIYGDLFIGPAHLEALRNLKSKVELLGDIVALLQSPMANVMAALQSGERRLMGVVETLSKASL
SIO_010081: DK880_RS00140
subclass of: SO_0000673
so part of: DK880_RS00140
location: 28973..29512
location: region:28973-29512:1
so has part: feature:28973-29512:1:exon

WP_109996833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28973-29512:1:exon

DK880_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rplL
locus tag: DK880_RS00145
old locus tag: DK880_00030
so part of: sequence
location: 29571..29951
location: region:29571-29951:1
so has part: feature:29571-29951:1:exon
subclass of: SO_0000010

position:29571:1
position: 29571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29951:1
position: 29951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29571-29951:1:exon

DK880_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rplL
locus tag: DK880_RS00145
old locus tag: DK880_00030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018476834.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L7/L12
translation: MADLKVLAEQLVNLTVKQANELFDILKQEHGIEPAAAAPVVMAAAPAATGGEAAPEQTAFDVVLKSAGSSKLAVVKRVRELTGLALTEAKGMVDKAPVTLKEKLTKEEADTMKQKLEEEGAEVELK
SIO_010081: DK880_RS00145
subclass of: SO_0000673
so part of: DK880_RS00145
location: 29571..29951
location: region:29571-29951:1
so has part: feature:29571-29951:1:exon

WP_109996834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29571-29951:1:exon

DK880_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rpoB
locus tag: DK880_RS00150
old locus tag: DK880_00031
so part of: sequence
location: 30167..34042
location: region:30167-34042:1
so has part: feature:30167-34042:1:exon
subclass of: SO_0000010

position:30167:1
position: 30167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34042:1
position: 34042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30167-34042:1:exon

DK880_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rpoB
locus tag: DK880_RS00150
old locus tag: DK880_00031
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934489.1
GO component: GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit beta
translation: MKNNQPNKERHSNSSDSFSSCTSLLDIQLKSFKDFFQLGVTPENRMREGLYKAFMEHFPIEDPKHNCTLEFINYTIDPPQYAPRECIERGLTYDVPLKVKLRLIQQDDQTGKYEGVEQEVFLGNIPYMTEQGSFILNGIERVVVSQVHKSSGIFFFENKHLSGSNIYSAKVVPAKGVWIEFTVDVNGVMYIYVDRKKKIPITTMLRAIGYGSDKELLNLFDLAEEVEATQPILAQHMGRKLAARIVKRNVEDIIDEETGEVVAWTSYAVIAERNTPLDEDAIEIILASGVDTVMLHKLDTTCADYSAVYNAFSKDPANDTREAIQHIYRQLRDSEAPDEQTARETVEALLFSSKRYTLGSVGRYRINKKLNLDIPLKTAVLTQEDIIHIIHYLIKIVNGTASVDDIDHLSNRRVRSVGEQLATQFSVGLARLARAVREKINVREAETFKPVDLINARTLSSIINAFFGINPLSQLIDQVNPLAEITHKRRVSALGPGGLSRDRAGFEVRDVHYSHYGRLCTIETPEGMNIGLISSLCMYARVNSMGFIETPYRQVHNGQVLLDSPICYLSASEEEKANFAPASVRLDADGRILDERVKVRSADEYPLVKPEQVHYMDIASSQIASVAASLIPFLEHNDASRALMGSNMQRQAVPLVKPDRPIVGTGVEKRVAEEFKGLPTAEGNGRVTYVDGRKIIITYDRSEEEALVAFDAASVTYPIDKFRGTNRNTCINLSPLVSKGDAVVKGQLLCEGYATQKGELALGKHLKVAFLSWKGYTFEDGIVLSERVVQDDLFTSIHIKEFVLEVKDTKFGAEELTNEIPNVSEAVISKLDSNGIVRIGTEVKEGDILIGKITPKGEIDVTPEARLLKAIFGDKAGDVKNTSLQVPPGMEGMVIDTKLFSGPAKDKESKLKVKKELELLKKAHARELLKLRELIITKLSTLLDGMVTDGIYHQFGDIIIEPGSKFSSQVISEKLFPKKNIYQDESLYNVPEESHFIGDLLLDNWTKDDRKNVLIQRIIEGYSKKRRRYIVRFKREKFALEAGDGLPKGVVQVVKVYIAEKRKIKVGDKMSGRHGNKGIVCKIVPQEDMPFLADGVPVDVVLSPLALPSRMNLGQLYEAVLGWAGYTLDRRYSNPIFEGMPLEQISAELERAGLPAFGKTAVYDGGTGLLFEHKVTVGVVYLLKLAHLVDDKMHARSTGPYSLITQQPLGGKSQFGGQRFGEMEVWALEAYGAAYTLQEMLNTKSDDVVGRSKAYEAIVKGNNIPKPNLSESFNVLIHELRGLGLEITLVP
SIO_010081: DK880_RS00150
subclass of: SO_0000673
so part of: DK880_RS00150
location: 30167..34042
location: region:30167-34042:1
so has part: feature:30167-34042:1:exon

WP_109996835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30167-34042:1:exon

DK880_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rpoC
locus tag: DK880_RS00155
old locus tag: DK880_00032
so part of: sequence
location: 34111..38382
location: region:34111-38382:1
so has part: feature:34111-38382:1:exon
subclass of: SO_0000010

position:34111:1
position: 34111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38382:1
position: 38382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34111-38382:1:exon

DK880_RS00155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rpoC
locus tag: DK880_RS00155
old locus tag: DK880_00032
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018344565.1
GO component: GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO function: GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit beta'
translation: MKFRRNKLYSTEFSGIVASLASPEVILSRSSGEVMLPETINYRTYKPETKGLFCERIFGPVKDWECHCGKYKGIRYKSIVCDRCGVEITEKKQRRERVGHIELVVPVVHIWYFRVLPSKISYLLGIPTKKVEQIIYYERYVVVQPGIKEVDGIEAMALLSEEEYLAILEQLPPENQLLSPSDPNKFIAQIGAEAIESVLKRIDLKKLSIELRKQLLTDTSQQRRLEVVKRLKIVEGFRDPNRKVENRPEWMVMRILPVIPPELRPLFSLGGGKFATSDLNDLYRRVIIRNNRLKRLLDIKAPQIIIRNEMRMLQEAVDSLFDNSRKVNSVASEGIRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELMLHECGLPKEMALELFMPFVIRRLIERGVAETVKVAKRLIEEKNAVVWDVLEYALQGHPVLLNRAPTLHRLGIQAFQPKLIEGKSIQLHPLVCTAFNADFDGDQMAIHVPLGQEAIAEATLLMLAPFNVLNPSNGVPITIPSRDMILGLHYLTKGKRSTSDDSVLGEGMCFYAPQEVLIAFAHEKVSKHAYIKLLLRKKNAIGEEERLYIETTVGRVLFNEYCPEGMAFINETLNVRNMQGIVVDMYAQFGTVATVTFLDNIKKLGFESAFQAGMSIGLDDVKVPATKSQLIEQATAEIEAISNNYMLGLITDNERYNQVIDVWTRANTRITHQLMEQLEADQDSFNSVYMMMVSGARGSREQVRQLGGMKGLITRPKKSAQGAVGEIIEDPIISNFQEGLNVIEYFIATHGARKGLADTALKTADAGYLTRRLVDVAQDLTVILEDCGTLKGVRVQAVKVENRVVESLSERILGRVVAEDVFNPKTGKLLIQSGSEIDEQIVASIEAAGLEEMFIRSVLTCDLSQGVCVKCYGRNLATCNMVSIGEAVGVIAAQSIGQPGTQLTMRTFHVGGIASNIAVDAKVKAKYAGMVSFEDLITTTYLDQDGEEVEVVMSRSAELQILESASKKILISTHVPYGAYLKVKDKASVIYDQELYHWDPYNVVVLATQEGTVKFLDLEEGITYQEEFDEQTGRKAKVMIESRDKSKQPGVALCDKKGKPVATYTLPVKAQITVEIGDVVQKGEVLAKVPRIINQTRDITGGLPRVVELFEARRPANTAVISELSGIVSYGGIKRGNREIFIESKEGVRAKYMIPLSKHILVQDNDYVKVGEVITDGSVAVADLLATKGPLVAQEFILNELQSVYRLQGEKINNKHIEIIIKQMMRKVEVIDPGDTNLLHGQMLDKAQFLEENNRIYDKCIVEAVGGSTLFELGQFVPKHRLIQENEQLQQKGLDPVQVRSAEMAIAQPKLQGITQASLATQSFLSAASFQETSKVLSDAAVSAKYDSLKGLKENIIVGHLIPAGTGIRKYEKLMVNSKREYDAAVS
SIO_010081: DK880_RS00155
subclass of: SO_0000673
so part of: DK880_RS00155
location: 34111..38382
location: region:34111-38382:1
so has part: feature:34111-38382:1:exon

WP_109996836.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34111-38382:1:exon

DK880_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00160
old locus tag: DK880_00033
so part of: sequence
location: complement(38554..39306)
location: region:38554-39306:-1
so has part: feature:38554-39306:-1:exon
subclass of: SO_0000010

position:38554:-1
position: 38554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39306:-1
position: 39306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38554-39306:-1:exon

DK880_RS00160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00160
old locus tag: DK880_00033
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013455590.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MISFENISKSFNNKIILDHISGHFQAGQMSLIIGASGSGKSLLVKCLVGLLMPDQGQALFDNRDLIYGSKPLQTEIRREIGMLFQGGALFDSQTIEENVRFPLDALTDMPLAEKKDRVNECLEQVGLADVQRKMPNELSGGMKKRAGIARAIVTHPKYLFCDEPNSGLDPQTALKIDELIAEITYTYRTTTVVVTHDMNTILSLGDFILFLHQAKKTWEGSSKAILHTDVISLQNFLFVGKFKTFLCSSM
SIO_010081: DK880_RS00160
subclass of: SO_0000673
so part of: DK880_RS00160
location: complement(38554..39306)
location: region:38554-39306:-1
so has part: feature:38554-39306:-1:exon

WP_109996837.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38554-39306:-1:exon

DK880_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00165
old locus tag: DK880_00034
so part of: sequence
location: complement(39316..40059)
location: region:39316-40059:-1
so has part: feature:39316-40059:-1:exon
subclass of: SO_0000010

position:39316:-1
position: 39316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40059:-1
position: 40059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39316-40059:-1:exon

DK880_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00165
old locus tag: DK880_00034
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934740.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MVKELKAYLLFLRAMFGNAVPYRMFLARLTKECIQIGVDSVGIVCIISIFMGSATFVQLASQMTNPFMPKSIIGLAVRNMTVSELAPTVIGIVFTGKISSSIASELGSMRISEQIDALEIMGINTKNYLALPKIIATVCMFPLLVIIAMFLSIYGGYLACTWLTTFSPKAYLDGLRQAFDVYDVHVALYKSLVYGFMLSSLACYKGFTTRGGALDVGQASTDAVTNSCLAILIADLFLVYGLLGNRV
SIO_010081: DK880_RS00165
subclass of: SO_0000673
so part of: DK880_RS00165
location: complement(39316..40059)
location: region:39316-40059:-1
so has part: feature:39316-40059:-1:exon

WP_109996838.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39316-40059:-1:exon

DK880_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00170
old locus tag: DK880_00035
so part of: sequence
location: complement(40282..41637)
location: region:40282-41637:-1
so has part: feature:40282-41637:-1:exon
subclass of: SO_0000010

position:40282:-1
position: 40282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41637:-1
position: 41637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40282-41637:-1:exon

DK880_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00170
old locus tag: DK880_00035
inference: COORDINATES: protein motif:HMM:NF013703.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015297 - antiporter activity [Evidence IEA]; GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MATE family efflux transporter
translation: MLRHFSSIDRALVRGYLIRTYPIAFSILNTLAMEAINTIVITRMGICFAAYALCINALFNFFKKINTGISVSVSLLTARSMHKKNYRKATQILQHALFLNLFLASVFFLILVGYSFYLESSSKLPHPIDVGQRSYLLLLAIALIPSAVNTMIRRYLEGISREKIGLKLAFLTLIANIIFNFLLCGKSKVPFPGLKGVGISIVLSEMLTAIIGMSYIRHTLQLQGCTMRLQFNQISWRYIKAILSIGGPIGLQFGIEGGYLFLITFIIGKIGMEEQATHAIVFNICQLVTIFSIGLGISGAMYVAQQHRSHNICIVRKVALTACLMIELVSLITGCILLALGPYIFTFYKAEGRVNVFVCELINHLFLFQLFYSISHWGSSVLRGLNDKTFPLICSTFTQLIGISMCYFLILKNKWGINWGINGVWMTLILERMVLSLLLLMRFEWKTKTKT
SIO_010081: DK880_RS00170
subclass of: SO_0000673
so part of: DK880_RS00170
location: complement(40282..41637)
location: region:40282-41637:-1
so has part: feature:40282-41637:-1:exon

WP_109996839.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40282-41637:-1:exon

DK880_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00175
old locus tag: DK880_00036
so part of: sequence
location: complement(41761..43323)
location: region:41761-43323:-1
so has part: feature:41761-43323:-1:exon
subclass of: SO_0000010

position:41761:-1
position: 41761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43323:-1
position: 43323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41761-43323:-1:exon

DK880_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00175
old locus tag: DK880_00036
inference: COORDINATES: protein motif:HMM:NF024744.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-protein phosphatase
translation: MQGQALTKAAEQLDFAKEIQKLRAAADQKRGITWKLAGDSLLRDALAVSCHSFYAAEDYVVIIMNSYRAGAKIALLYGEDDGIFKEKAASFMHTYTANAFYTSCDENFWTDQTKILNKEIILLLQERIFPHESLEGINKKLRRAENYVGLDDTHYNVTTQFKIGNKIFGLEDKKWLKLTPDQQEEFRNRQSKDWYRCLDFFEKKLVDAYVPKFLEGSHLIPTQIRSIPGCRNAYQKNVLAYDEKGNATVLGSYYHSATLASLIEDAAASDQIAQHNWAQVNAKDRNTIVMILNNDVELKFGSYDLSEKKIIEQTRYIVNDTNRLMYIPVNTPGMFTTPIFKHQVKELIKDSKAKDTSSAHNTFLEKVKSLEQIADSSDSTNRVKHLINPSNHYAAIGANYIACRAILNQDKKQAYPSVLFNCKSGKDRTGYISYLADAAIIHSIYPTVGQEEIIRQAVAMGTHQQFLSSVNGGMPGRFGMKPVASNFTMKTIGSLTPVRITPIDKKLFPFPALLTNIPLN
SIO_010081: DK880_RS00175
subclass of: SO_0000673
so part of: DK880_RS00175
location: complement(41761..43323)
location: region:41761-43323:-1
so has part: feature:41761-43323:-1:exon

WP_204082265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41761-43323:-1:exon

DK880_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: uvrB
locus tag: DK880_RS00180
old locus tag: DK880_00037
so part of: sequence
location: 43606..45669
location: region:43606-45669:1
so has part: feature:43606-45669:1:exon
subclass of: SO_0000010

position:43606:1
position: 43606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45669:1
position: 45669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43606-45669:1:exon

DK880_RS00180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: uvrB
locus tag: DK880_RS00180
old locus tag: DK880_00037
EC number: 3.1.25.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934159.1
GO component: GO:0009380 - excinuclease repair complex [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006289 - nucleotide-excision repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: excinuclease ABC subunit UvrB
translation: MLFELIAPYEPAGDQPKAILDLVKNSKRGIRNQVLLGVTGSGKTFTIANTIKELNKPTLVISHNKTLAAQLYGEFQAFFPNNKVEYFVSYYDYYQPEVYLPVSNIYIEKELAINDELERLRLSTVSSLLSGRKDIIVVASVSCIYGIGKPETFQANSCLLKIGALLPRHDFLNVLVGMLYRRHNQDMPFTRGCFRVLGDTIDLFVAYADYAYRLVFWGDELEAIFMIEPTSGRQIKAEREVVIFPANLFMTNKETLQEAIQQIQLDLAAQLTYLEQAGKLDESKRLQERTLLDLEMLKELGYCSGIENYSRYMDGRVAGERPYCLLDYFPSDYLMVIDESHVTIPQFKAMWSGDRARKINLVEHGFRLPAAMDNRPLHFNEFESLLHQVIFVSATPADYELERSNGIIVEQIIRPTGLVDPQVDVRPTTHQMQDILNAIHTVVAKEERVLITTLTKRMAEKLTDYLVSAHIRCKYMHSEIKTLDRVTILNELRKGTFDVLVGVNLLREGLDLPQASLMLILDADKEGFLRNTRSLIQTIGRVARHTEGHVIMYADSLTASMEKAIKETERRRKLQIVYNTKHHITPRSVYQKQIDIELAIQINIPEAYGIISREAYPAVTEDVAVVYGSKNGLQAEIKKLEEQMHQAAAALRFLEADRLKARIEHLRKGERGLELDSNEQKTSHRTP
SIO_010081: DK880_RS00180
subclass of: SO_0000673
so part of: DK880_RS00180
location: 43606..45669
location: region:43606-45669:1
so has part: feature:43606-45669:1:exon

WP_109996841.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43606-45669:1:exon

DK880_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00185
old locus tag: DK880_00038
so part of: sequence
location: complement(45666..46967)
location: region:45666-46967:-1
so has part: feature:45666-46967:-1:exon
subclass of: SO_0000010

position:45666:-1
position: 45666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46967:-1
position: 46967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45666-46967:-1:exon

DK880_RS00185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00185
old locus tag: DK880_00038
inference: COORDINATES: protein motif:HMM:NF013117.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mechanosensitive ion channel family protein
translation: MKKISFIFLFIGHYMLLPAQGEATVTSVQKGNWDAWHDAVYTHSSCVNHAHRAESDGTLGSLTQEEEGRYSKKSIACLKQYHTYVTMRNLCYDLLPKGIGKKKYCMLEVWQYVFLLAMGFIILLTHRFLPYLFHALLYRCIGQRAEQYYVVRRILFIYILLFYLSISLRIFPFQIIERFINPVLGTIHSLLFICLLYQVVNIIQEWIQARQQPNKFIVYTLPLFSMVVKIFILFIGFITIMSKLGFETKALTNVLSFCTLGISFAAKDTIQNIFGSFLIMMDRPFVIGDEIIACTIRGKVESVGLRATLLRTKEGSIVYIPNGKLADSQIDNMSKRTERIVSLSIPVSYTVSLERLTKFIEGLHKMATAQSLAKPDKTAIYIENMETQGFVIHFNVYLNCRQVQLEQAYRNQTILLILQLADQLQVQLGKEPH
SIO_010081: DK880_RS00185
subclass of: SO_0000673
so part of: DK880_RS00185
location: complement(45666..46967)
location: region:45666-46967:-1
so has part: feature:45666-46967:-1:exon

WP_109996842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45666-46967:-1:exon

DK880_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: uvrA
locus tag: DK880_RS00190
old locus tag: DK880_00039
so part of: sequence
location: 47096..49930
location: region:47096-49930:1
so has part: feature:47096-49930:1:exon
subclass of: SO_0000010

position:47096:1
position: 47096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49930:1
position: 49930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47096-49930:1:exon

DK880_RS00190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: uvrA
locus tag: DK880_RS00190
old locus tag: DK880_00039
EC number: 3.1.25.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934375.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006289 - nucleotide-excision repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: excinuclease ABC subunit UvrA
translation: MSLAIDKGRHKFDYIEVLGARTHNLKNIDLRFPRNQLVVLTGVSGSGKSSLAFDTIYAEGQRRYRESFSAYARNFLENITRPEVDAINGLSPVIAIEQKTTHSHARSTVGTFTEIYDFMRLLFARIADAHDHCSSNKMVVQNEDQLFTDLLNMYAGQSVTLMAPLVSGKKGHFGELFNRLIRLGFHKISLDGTIKELDDSLTLARYKKHDIALVVDHVIVTKPNQDRMKHSLQLALLHGKGRVKVVDAAHQSRYFSTSLVDVETGCAYDAPEPSLFSFNTAHGACPTCAGLGEKIQVDIDSIIPDKTKSIYQGAILPLGAHKSSILFKKITTLLAFYRHQITDPVETLPLPLLHLLLLGNTVQSATNKGLDYVEPFPGVIPTLIKEQEREGSVTSSMGTIFEAVCPDCAGSRLNKVARSFKIKERTIAELASMELDKLQAWFTQLPASLTERQQQIAQELIKEISKRLQFLIDVGLHYLQLNRSLKTLSGGEAQRVRLATQMGIQLLGVCYILDEPSIGLHQRDNSRLIAALKTLRDMGNTLLVVEHDRETMLEADYLIEIGPQAGLYGGLVVAAGSLPEFLMQDSVTAEFLNRKRDFPFSATRKKGNGNAITLMGCSGHNLKNITVTIPLGMMVCITGVSGSGKSSLIHKTLLPILQRKLYNSPVVPLDYKEATGLVHINKVIEVNQAPIGRTHRSNPATYTTIFTEIRNFFALLPEAQIQGYKPNRFSFNIKEGRCNSCEGIGHQRIEMGLLPEIYVTCASCKGKRYNRETLAVRYKGKSIADVLDMTVEDAFSFFKNHATICSKLHTLMQVGLGYITLGQHATTLSGGEAQRMKLATELTQKSSRDTLYILDEPTTGLHFQDIVDLLSVLQKLVEQGNTVLVIEHNVDMIKVADYVIDLGPEGGDAGGYVVAVGTPEEVALAQASHTGYFLRKELEIIHKS
SIO_010081: DK880_RS00190
subclass of: SO_0000673
so part of: DK880_RS00190
location: 47096..49930
location: region:47096-49930:1
so has part: feature:47096-49930:1:exon

WP_109996843.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47096-49930:1:exon

DK880_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00195
old locus tag: DK880_00040
so part of: sequence
location: 49939..50532
location: region:49939-50532:1
so has part: feature:49939-50532:1:exon
subclass of: SO_0000010

position:49939:1
position: 49939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50532:1
position: 50532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49939-50532:1:exon

DK880_RS00195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00195
old locus tag: DK880_00040
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIGIGNTIKKLPLYFQYAYRVGICLAVIGLTSCKDLKNWSSPYVSHVTIEFGQKRDAAGHLASLRTCLLQRELFYLKLDRNAKSDGYRVFMENLEKLPERLKNKIVLEPNVTSFSFELYNTDYYHKVIVTYDTVTSLISPEAGGIQRKYTIKQIELIEETAPQADGTPARKPIFCDYRIKKATLKKEKRSVNVKLFY
SIO_010081: DK880_RS00195
subclass of: SO_0000673
so part of: DK880_RS00195
location: 49939..50532
location: region:49939-50532:1
so has part: feature:49939-50532:1:exon

WP_109996844.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49939-50532:1:exon

DK880_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00200
old locus tag: DK880_00041
so part of: sequence
location: 50513..51328
location: region:50513-51328:1
so has part: feature:50513-51328:1:exon
subclass of: SO_0000010

position:50513:1
position: 50513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51328:1
position: 51328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50513-51328:1:exon

DK880_RS00200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00200
old locus tag: DK880_00041
inference: COORDINATES: protein motif:HMM:NF039966.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6048 family protein
translation: MLNYFIKIFFAVLLVVTVSSHATTSTEQSLPSPLQEAPQAEAKRATIWPTTLYLGIDLAKTGYGWHQKTGNAWEISSSIDFSRLLWDMDYGQGSIHRDGGNDGSITDTTGRYFRVGLGWNLLTPTDDHNQFFAGIRYARSWFNFALKGRVLPCDHRSYNDKQGIIGKPTTCIGCTSGWDSWKGDSVVDWWEIVAGGKVRLVHILSIGCTVRYKFHKKTIKKRCTNNQIAEPFDIPGFGFGEYDHAFGCSLYVLLRIPLQSKHKVAISSRKN
SIO_010081: DK880_RS00200
subclass of: SO_0000673
so part of: DK880_RS00200
location: 50513..51328
location: region:50513-51328:1
so has part: feature:50513-51328:1:exon

WP_109996845.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50513-51328:1:exon

DK880_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00205
old locus tag: DK880_00042
so part of: sequence
location: 51383..51985
location: region:51383-51985:1
so has part: feature:51383-51985:1:exon
subclass of: SO_0000010

position:51383:1
position: 51383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51985:1
position: 51985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51383-51985:1:exon

DK880_RS00205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00205
old locus tag: DK880_00042
EC number: 3.4.23.36
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934379.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal peptidase II
translation: MRRVLKYIFLVLLVIVVDQAVKLWVHGHMELGLAGHINLVGNLFGLTYVLNYGMAFGLQWSFKYGKLLMTGIRLAISLGIVRHIFFGFLRSAPTGWVVGWVLILAGALGNSIDGVLYGVYLDNAPDTAVMKWFHGQTIDMLHLDVWSGTLPNWFPIVGGEVIALLPIFNIADVSICSGLLCILYCYRQIAAWEKSIRSIS
SIO_010081: DK880_RS00205
subclass of: SO_0000673
so part of: DK880_RS00205
location: 51383..51985
location: region:51383-51985:1
so has part: feature:51383-51985:1:exon

WP_109996846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51383-51985:1:exon

DK880_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00210
old locus tag: DK880_00043
so part of: sequence
location: 52009..52635
location: region:52009-52635:1
so has part: feature:52009-52635:1:exon
subclass of: SO_0000010

position:52009:1
position: 52009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52635:1
position: 52635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52009-52635:1:exon

DK880_RS00210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00210
old locus tag: DK880_00043
EC number: 3.4.23.36
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934380.1
GO function: GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipoprotein signal peptidase
translation: MRQFIKYFIIVLLIVLADQASKLWVHYHMAMGVEGQINLIGKILKLTYTLNPSMAFSIHLGFKYGKLLLTITRIAASCYIFWCVVQAIRECVAPAWVWGWALVLAGAIGNSIDSTFYGIWLDNALDTAPMQWFHGQVIDMIHIDLWSGVMPDWMPIWGGMHVCCLPIFNIADVAISVGLLFILCNASAKSNSTSDLRNECALYEEGCG
SIO_010081: DK880_RS00210
subclass of: SO_0000673
so part of: DK880_RS00210
location: 52009..52635
location: region:52009-52635:1
so has part: feature:52009-52635:1:exon

WP_109996847.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52009-52635:1:exon

DK880_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00215
so part of: sequence
location: 52844..53068
location: region:52844-53068:1
so has part: feature:52844-53068:1:exon
subclass of: SO_0000010

position:52844:1
position: 52844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53068:1
position: 53068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52844-53068:1:exon

DK880_RS00215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00215
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLPCSSLLRYMLALSLPREAGTQEEASITPQEKTASLAQLSDFHDWMRSFRHCACFSYFLIGFIPVNIVYLTLG
SIO_010081: DK880_RS00215
subclass of: SO_0000673
so part of: DK880_RS00215
location: 52844..53068
location: region:52844-53068:1
so has part: feature:52844-53068:1:exon

WP_162534045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52844-53068:1:exon

DK880_RS00220
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00220
old locus tag: DK880_00044
so part of: sequence
location: 53127..56654
location: region:53127-56654:1
so has part: feature:53127-56654:1:exon
subclass of: SO_0000010

position:53127:1
position: 53127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56654:1
position: 56654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53127-56654:1:exon

DK880_RS00220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00220
old locus tag: DK880_00044
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MILFNNLPLVMVVGFLLLTFVVGLYYSRKVTTFREYAIGNKDFATATLVATMLATTFSGGGLLRGVEQTHAQGIFWILFGLSVSIAYLLLSPLMLRMGPFMQHLSLAESIGTSYGKMPRLVVALVSVIGNVIMVTTQIIAMTKAIEVCLDLSNSDNAKVMQASIPGIATLIVIGYSMFGGIRSVTFTDVLQFITFTAIIPLVAWFIFKSTDKSVLEVASILHKEPKFQLTSCLHINKLLALTTLFLASLVGFIDPIIIQRAYMASSPIQARKLFIHAGTFGFIINLFITLIALFLFVKAPTLSTNQIWPYVFKSIPPIFKGFIAVSLLAMAMSTADSMLNTCAVLVSHDIVSSIQTTKGIADKYKLSLARCTVLIVGSCAMLLAFQKSDLLALLKLAFAFSIPIITAPFLLAVYGFRSSSRTALIGMATGVSAILAWNRWIEPITDIDGAFPCMLANGLAMLAAHYLLPQPAGTGWIPPDKIYQQRQQEKARIARRSKQERERFFSKENLIKLKPSRTGLLLSGIYLLVIGVATFGYCYDYSQSLYSYSLLLLPCMGLLYMGCSVYGYQTIPDRAIGICWFISVLVGFPFHLLFSCFLCQTLLVPFILFFTHGTVLLWTLPFYWSLRALAITTGGMLIAICCCKATVVWPDPMIVLPLVGVGSFLVMLVVYLKKQNRIQQERVAYFLQKQATQEAYELKKLAYSEELPTASPQSLLAQEGTILEKAIQNVTQSIAFVDSTTPFLKEDFQSIIDKFAEWAYYLKQRAKRQDQLLLQPTAIPLEALIDAGEVAYQKEKGYLPGLWVEEVVNIPDTMLGDREQLVRLLFLALNHVRQSSASFRSPITLQLQLTQLRYKKREPLEADGDPDCISFPALALVLRTENKNIPLSTLQAVYDVEDASTTQPMDPFVSPQMVNLRKENLASIVHAHYGFLLLPHAEQLVCLLPLDVTQVREEMLALSLPREAGTQEEASITPHEKTASLATLSSFHDWIPSFESIDPFLIAEILLLLRRCYGFKRHASGQLFYVRAVGIAEWVAAWTDGHAKLVYATLLYDLVRYTRLPLSYIKANYPLIVYCFVENVIAVDSRERLEESLLAVANRFKKSLQKEHISVLYVKLAERLYDLKHASGYKDPAVVQAMAKESLTIDVELAQRYGESGMAILLKQAAEEVLLISKP
SIO_010081: DK880_RS00220
subclass of: SO_0000673
so part of: DK880_RS00220
location: 53127..56654
location: region:53127-56654:1
so has part: feature:53127-56654:1:exon

WP_109996849.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53127-56654:1:exon

DK880_RS00225
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00225
old locus tag: DK880_00045
so part of: sequence
location: 56780..57799
location: region:56780-57799:1
so has part: feature:56780-57799:1:exon
subclass of: SO_0000010

position:56780:1
position: 56780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57799:1
position: 57799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56780-57799:1:exon

DK880_RS00225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00225
old locus tag: DK880_00045
inference: COORDINATES: protein motif:HMM:TIGR01784.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MTHHLKHDALIKKILTDQLAAQEFLEHYLPADFKALVDLSQITIEKESFVEDNLKRKLTDLIYSVKTKNQEKAFVYVLIEAQVIPDHWMALRLWKYMLLLCERNRKNKDRLPLLCPIVIYHGSRTYHAPRNLWQLFSNPEQAKKLMAEDYQLIDLQSMSDDAILKKRQLAMFEYLLKHIHQRDILKLWSELFTKCKHVLLVDKEKDYICIKALLWYSDAKLPEEKQAALERILSDHLSKEETATIMRTIAQKYIEEGRQKGIMQGLEKGMMQGMEKGMEKGMEKGMEQGIIQGMEQGMVQGMMQGKIEIAKAMLANGAEISFIEKITGLNTAFIDSLQA
SIO_010081: DK880_RS00225
subclass of: SO_0000673
so part of: DK880_RS00225
location: 56780..57799
location: region:56780-57799:1
so has part: feature:56780-57799:1:exon

WP_109996850.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56780-57799:1:exon

DK880_RS00230
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00230
old locus tag: DK880_00046
so part of: sequence
location: 57813..58631
location: region:57813-58631:1
so has part: feature:57813-58631:1:exon
subclass of: SO_0000010

position:57813:1
position: 57813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58631:1
position: 58631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57813-58631:1:exon

DK880_RS00230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00230
old locus tag: DK880_00046
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRIFLFFLFYVTCIYAHAYQETHVKERSFSAGITIGLGPASIHGLGNPYFDIDQLKQKRKSSGNHSSLIEGGGLTSGEVGSVGCALCGGVYFAYAFSNYISGEIQMNYISKSILMTYKGNTFFSMRLYAIPSIYLYSKGLSFPLLGSFYPFGNQKGLKLFAGIALDFPTLCKRFMQYGMAKEWYEGKEVAYTAFKKQLRNWDMAMVIGIGYEWCAGWILDIRYNRGFLGLLKENYLADKLFKDSDITGIKNIKNRYTTFTIGYNILRLFKV
SIO_010081: DK880_RS00230
subclass of: SO_0000673
so part of: DK880_RS00230
location: 57813..58631
location: region:57813-58631:1
so has part: feature:57813-58631:1:exon

WP_109996851.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57813-58631:1:exon

DK880_RS05360
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05360
so part of: sequence
location: complement(58911..59051)
location: region:58911-59051:-1
so has part: feature:58911-59051:-1:exon
subclass of: SO_0000010

position:58911:-1
position: 58911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59051:-1
position: 59051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58911-59051:-1:exon

DK880_RS05360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05360
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIISALSLFALHYLLPKRPHTGWIGIQDRSAWDLQNQITKRWCYNI
SIO_010081: DK880_RS05360
subclass of: SO_0000673
so part of: DK880_RS05360
location: complement(58911..59051)
location: region:58911-59051:-1
so has part: feature:58911-59051:-1:exon

WP_204082266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58911-59051:-1:exon

DK880_RS00235
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00235
old locus tag: DK880_00047
so part of: sequence
location: complement(59239..59865)
location: region:59239-59865:-1
so has part: feature:59239-59865:-1:exon
subclass of: SO_0000010

position:59239:-1
position: 59239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59865:-1
position: 59865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59239-59865:-1:exon

DK880_RS00235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00235
old locus tag: DK880_00047
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MELRFYLFTISLFVARNWKGHYLASALQRSLFTVLLAYGSGLLCQATPTKGDQPTEQTASKKEVPAENKGDSTDSLEEILKKDATTGGIICNVLSGLALCYNALANLLLYPIFSFLLLALSLGALVLAYFWMKKIKAEQPIAPSWVIVTSFYLLCYLDLFLIVFQKKQVLLLFLELEKDLLLVSIAIGVGYAAGKLSSSKSFEQKKLP
SIO_010081: DK880_RS00235
subclass of: SO_0000673
so part of: DK880_RS00235
location: complement(59239..59865)
location: region:59239-59865:-1
so has part: feature:59239-59865:-1:exon

WP_109996852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59239-59865:-1:exon

DK880_RS00240
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00240
old locus tag: DK880_00048
so part of: sequence
location: 59996..63784
location: region:59996-63784:1
so has part: feature:59996-63784:1:exon
subclass of: SO_0000010

position:59996:1
position: 59996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63784:1
position: 63784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59996-63784:1:exon

DK880_RS00240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00240
old locus tag: DK880_00048
inference: COORDINATES: protein motif:HMM:NF016736.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: baseplate J/gp47 family protein
translation: MNIQKKFNILFNRTGTCQAERLLPELIENDLLISDKKLSDYLRFIYLYSDLLVYYDTNNQPMQANVWRKFLEQDDTVMCALILHTNIDRIKGRIQKKISLLRSNSTSMVDHKQWIPILETARDLVILLNYWHKNLPNEDIVRVKLDTVVHEVLNNHISILYKLLHYSGKNHGRQPFIDFCLFLEEHCAHTSLWKLNRALIYNEAGEVHPDDSQVIDSMDDFFDASFNTVYQLKELASNNYLHTLQLQNKEPHVALLIAFLQLLQYADAHLNHLPQRFLVHYYRHILKFNNNPATPDQAYLHFLLNPNYEFAFIPEGSRLIAKNPLNDEQILFEIKRNITIHRAKIKQISSLFPKQRSDKSAHTAIELAAITYANEQLKKLPFQLFPVLQNEESEKPHYQVATLLASPLFYLAEGLRSIQLKWKFTAESFQAFLGKHTDKDSAIYLARLSSILHSSASIQVTTKMGWFGIAAEAVTLQWIEEAYCLHMVVALGQEVPAISKLPAEYRGSLFNPAMPALAIVIPAGVSITDLSLFNALLLERIDIKVCVQNYRGLILQNQLGIIDNSQIIEPFGPLPKIDSSFYIGSGEIFAKPITSLKIDIKWENIPNTEDGFKHYYDGYPTKVNNEDFKVNISYLNHQHWNPTPASNRQHIPLFQVTKCSRGIERLDSYRNIRTIDIAPLNITKAQEPLDLFTYNPKTIAGFLKLQLSGPAQAFGHAIYPSLLNKVLVHNAQQKKASGSLLVLNEPYTPRIKAITVDYEAEETIACTPSSGEVTEQHGNSFFHISSFGYVKVLPSNGDTAPTLLPLIEKEQTSIAFGIADLNSTSCSMHIAMGEEPLGLDQAIQPPSWFYLSSNRWLPLKEAIVVDGTNGCSQSGIIVFDLGKLVRPATKDNTLMPAGLIWIKAQFSEEPARLTPIMAVYLQAVAASRVMDKQGVFAAPILPPHSILQLQHPIEGIDAVTQPIQTFGGRQFENHQAFYRRVSERLRHKNRAISAWDYEHMILEKFPAIYRVKCLNHTLRHANSMVQPGCITFVVIAKRKHGAIGMFPKANRQLLTEIKTYLQSITTPFVQCAVVNPMYEDIKVNVTVKFNTGYEKGLFLNLLQKDLRQFLSPWLFDPSADMLLGGDMPASKIIDFINSRSYIEGIGNFSIFKYVGSGADLKLDKISNYDSYLRPSYPWSIMISAKNHNIESVDTFDSTAQLRHGSVGDMAIGEDFIIGPFDNTNTQLEESGAYQDLDILIPSLEEHYLVTQKHIRTDHGYYE
SIO_010081: DK880_RS00240
subclass of: SO_0000673
so part of: DK880_RS00240
location: 59996..63784
location: region:59996-63784:1
so has part: feature:59996-63784:1:exon

WP_109996853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59996-63784:1:exon

DK880_RS00245
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00245
old locus tag: DK880_00049
so part of: sequence
location: 63768..64499
location: region:63768-64499:1
so has part: feature:63768-64499:1:exon
subclass of: SO_0000010

position:63768:1
position: 63768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64499:1
position: 64499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63768-64499:1:exon

DK880_RS00245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00245
old locus tag: DK880_00049
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934192.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adhesin
translation: MAITNREELKKNFEKGAIPTQNDFEDLIDSMFHKQDDGLVSPDNGLSLSPKGDSSKLITFFNSLNDFKPTWSIEPYPKNSSAFGLNLTDKNGESKFFIQSNGYIGLGTLNPSERLTVQGNINMHGRRGNYASGKVAGDGQWHDITPALNACHAFEVIAKIGKEGCGVHALTHAIALSTFGRSSNKIQKIRAYYGSFRNRIDVRWKGSTFNYTLQIRSMRDYGEGSMLQYYVTNLWWEEEATEM
SIO_010081: DK880_RS00245
subclass of: SO_0000673
so part of: DK880_RS00245
location: 63768..64499
location: region:63768-64499:1
so has part: feature:63768-64499:1:exon

WP_109996854.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63768-64499:1:exon

DK880_RS00250
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00250
old locus tag: DK880_00050
so part of: sequence
location: 64684..64953
location: region:64684-64953:1
so has part: feature:64684-64953:1:exon
subclass of: SO_0000010

position:64684:1
position: 64684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64953:1
position: 64953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64684-64953:1:exon

DK880_RS00250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00250
old locus tag: DK880_00050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012472908.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type B 50S ribosomal protein L31
translation: MKKGIHPLYRPVVFLDTSSGAKFITRSTISTSESIEWEDKKTYPLYKVEVSCVSHPFYTGKKIFVDTAGRIERFNQKYKKKTSSTSSNT
SIO_010081: DK880_RS00250
subclass of: SO_0000673
so part of: DK880_RS00250
location: 64684..64953
location: region:64684-64953:1
so has part: feature:64684-64953:1:exon

WP_109996855.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64684-64953:1:exon

DK880_RS00255
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00255
old locus tag: DK880_00051
so part of: sequence
location: 65116..66366
location: region:65116-66366:1
so has part: feature:65116-66366:1:exon
subclass of: SO_0000010

position:65116:1
position: 65116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66366:1
position: 66366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65116-66366:1:exon

DK880_RS00255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00255
old locus tag: DK880_00051
inference: COORDINATES: protein motif:HMM:TIGR03991.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative sugar nucleotidyl transferase
translation: MMRKIVLFDLPEDRLTLRPFSFTRPLSAIRVGMLSIAEKWQHYFPGSYTYLTCSTLHVKYTPVVSTDAYYINGVLCPDSVLAEAIARLNYNEVLLSEEGGLIAFRGNGFTSAQSNLLERITDKKLSRTIFFGELTQIKHTWDIFLCNAQEIERDWAWYTKGRVSKPIVDPHTIVYNEKDIFIEEGLAIHAACLNAEQGPIYIGKNVSIAEGAVLRGPLAICNDVQVQPHTYIYGGSTIGPFSSIGGEVSNSILLGYNDKPYQGFIGHTVIGEWGRLAAGSSLARTFFNGEPIVTWDFTKEAACEEKSLSTCGFFVGDYSQFGGNATIEPGSVIGVAAHLAANQLAMPYVPSFTYSGTNGKLRSISLVETLERLSKLMSYKHQVFLKEDKAIVAELFKTTAIHRTKAMMDHAIFRDT
SIO_010081: DK880_RS00255
subclass of: SO_0000673
so part of: DK880_RS00255
location: 65116..66366
location: region:65116-66366:1
so has part: feature:65116-66366:1:exon

WP_109996856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65116-66366:1:exon

DK880_RS00260
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00260
old locus tag: DK880_00052
so part of: sequence
location: 66344..67492
location: region:66344-67492:1
so has part: feature:66344-67492:1:exon
subclass of: SO_0000010

position:66344:1
position: 66344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67492:1
position: 67492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66344-67492:1:exon

DK880_RS00260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00260
old locus tag: DK880_00052
inference: COORDINATES: protein motif:HMM:NF024575.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLFSEIPEHNEFKNALIRHVALGRVGHAYLLVGPPGSANLTLAWAFATYLNCTFPIEGDACGNCSSCKSMAQWAHPDLQLLFPKKATGTQTEAEAQTIFKNYLRQHPFLTLEEWLAVLEQGSGQITKQDIHAITQRIAIQAFIGPYKIICIWLPECLNNAAANALLKTLEEPPARTVFLLVSCASEKIIPTIRSRSQQYYIPPFSKEAIEQLLRKQYTALDAHRYGAIAFLAEGDASKAFQLAEQAAPAHFDDFSSWMRHCYSGNFTKLIKQSESFHKLPIKEQKDFLRYALQLLRMTILGKCNPTVSDTTLADESTFSKNFGLHVTVSQLHLIIHLLNQAYAHLERYAHAKMMFANLSIQIATLLKAKQLSILGHALSKNK
SIO_010081: DK880_RS00260
subclass of: SO_0000673
so part of: DK880_RS00260
location: 66344..67492
location: region:66344-67492:1
so has part: feature:66344-67492:1:exon

WP_109996857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66344-67492:1:exon

DK880_RS00265
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00265
old locus tag: DK880_00053
so part of: sequence
location: 67536..68336
location: region:67536-68336:1
so has part: feature:67536-68336:1:exon
subclass of: SO_0000010

position:67536:1
position: 67536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68336:1
position: 68336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67536-68336:1:exon

DK880_RS00265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00265
old locus tag: DK880_00053
inference: COORDINATES: protein motif:HMM:NF014305.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGYIKKIVLYCLQLVIIIIQAADCNCKRSDYAEIASKTKSAKQLVVCLHRAGSNGDALINSSILLMHHKLPDCHFMAPHGTEFFIGCQCCFPSPDPREWFNSMPLRKEVELRKEVCSEIEDQGRTIAIVQPLLAKNAPLLINTIKQKQRALQLTNKDTIIVGFFEGATMGIYLTLMQEEPFLATIALPSMELIPPSSCKNTQTPISLIYKKDDTIAEKGTDTAIAYLKKYNVPCNRYILPNKRDRKSNNDEQQKMIIDCIRKASKA
SIO_010081: DK880_RS00265
subclass of: SO_0000673
so part of: DK880_RS00265
location: 67536..68336
location: region:67536-68336:1
so has part: feature:67536-68336:1:exon

WP_162534046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67536-68336:1:exon

DK880_RS00270
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00270
old locus tag: DK880_00054
so part of: sequence
location: complement(68832..69182)
location: region:68832-69182:-1
so has part: feature:68832-69182:-1:exon
subclass of: SO_0000010

position:68832:-1
position: 68832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69182:-1
position: 69182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68832-69182:-1:exon

DK880_RS00270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00270
old locus tag: DK880_00054
inference: COORDINATES: protein motif:HMM:NF013224.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Lrp/AsnC family transcriptional regulator
translation: MERVKTLEQYKVITHYYAQIDYAQLGLDTTVMVGITLQKMTGTAVKLFQAAINKIAAITTCYQVIGIFDFIVMVQTKDMLTYQNEVVAKLYMLEEVARMQTLTVTQLLKNKPLRLA
SIO_010081: DK880_RS00270
subclass of: SO_0000673
so part of: DK880_RS00270
location: complement(68832..69182)
location: region:68832-69182:-1
so has part: feature:68832-69182:-1:exon

WP_109996859.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68832-69182:-1:exon

DK880_RS00275
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00275
old locus tag: DK880_00055
so part of: sequence
location: complement(69221..70519)
location: region:69221-70519:-1
so has part: feature:69221-70519:-1:exon
subclass of: SO_0000010

position:69221:-1
position: 69221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70519:-1
position: 70519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69221-70519:-1:exon

DK880_RS00275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00275
old locus tag: DK880_00055
inference: COORDINATES: protein motif:HMM:NF019310.2
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MKVKLLLLREKVFPKERCYLIAILLNALISGSVFSLIAIAILTNQLAEVGYPIGKMGILAFATCPYSLKILWAPFLDRYTVPFLCAKLGRRRGWAMATQICLLLALLSLNLLDISPHRPFPILPMACIIFTIALFAAIQDTVWETYRIERPNTKEELPLSIASSSIGFRLGMFIGSVLSLDVAAKYGWHQVYQMVFLLAHLGPITILCIREPTSKISNTLQDKRNYFHIIYKSILLLKEKQPYLLGALFFLLLYKSNDILPMTVRVYLSNDLSFRNTDVSLSTKIGTLAALAGSTLSGMLIPKTGIYRGIRIAAIVQLLSPFMLMLLALIGHDILLFIGATAVQFFVSGLAVTAFTTYSASLCTSKWKTTQYTIIASINSILRILLQTVAGLAASYLTWTQFFLGVMLLGIIAIVIFPMIFRKNTSGDQDYK
SIO_010081: DK880_RS00275
subclass of: SO_0000673
so part of: DK880_RS00275
location: complement(69221..70519)
location: region:69221-70519:-1
so has part: feature:69221-70519:-1:exon

WP_109996860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69221-70519:-1:exon

DK880_RS00280
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: prfB
locus tag: DK880_RS00280
old locus tag: DK880_00056
so part of: sequence
location: complement(70656..71745)
location: region:70656-71745:-1
so has part: feature:70656-71745:-1:exon
subclass of: SO_0000010

position:70656:-1
position: 70656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71745:-1
position: 71745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70656-71745:-1:exon

DK880_RS00280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: prfB
locus tag: DK880_RS00280
old locus tag: DK880_00056
inference: COORDINATES: similar to AA sequence:RefSeq:WP_133282299.1
ribosomal slippage: true
GO function: GO:0003747 - translation release factor activity [Evidence IEA]
GO process: GO:0006415 - translational termination [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide chain release factor 2
translation: MQTQYDHLEARITALKHCLDLAGKQLQLHSLKEAASAPSFWSNPQEEIEKTIQQIKELEEIVKKFHLLQDQWEILLLLEELSQSATEEQAELSKELCITIETVSTLLEEMELKAMLSSKEDSFNAVIDIKPGAGGTESQDWAAMLVRMYTMWGNKQGYSVKTIHYQSGDTAGIKSATLEVIGSYAYGYIKAEVGIHRLVRLSPFDSAGKRHTSFASVYAAPLIDDTIKIELNPTDLRWDTFRSGGAGGQNVNKVETAVRVRHIPSGTIVECQQERSQLQNKEKALQLLKSKLYQQELEKRREQQQEVERSKKKIDFGSQIRNYILHPYKIIKDNRTGHERKDVEKVLDGDLNGFIKSYLLQK
SIO_010081: DK880_RS00280
subclass of: SO_0000673
so part of: DK880_RS00280
location: complement(join(70656..71687,71689..71745))
location: region:70656-71745:-1
so has part: feature:71689-71745:-1:exon
so has part: feature:70656-71687:-1:exon

WP_204082267.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71689-71745:-1:exon

position:71689:-1
position: 71689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:70656-71687:-1:exon

position:71687:-1
position: 71687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DK880_RS00285
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00285
old locus tag: DK880_00057
so part of: sequence
location: complement(71759..72538)
location: region:71759-72538:-1
so has part: feature:71759-72538:-1:exon
subclass of: SO_0000010

position:71759:-1
position: 71759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72538:-1
position: 72538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71759-72538:-1:exon

DK880_RS00285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00285
old locus tag: DK880_00057
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAALVSTKLLGNRFSRMVNKFLTIQKKIRLGLFSCLCFCCATTSSTALGVNFTERAYFYEDGSGLFSLEVDLTKSAKLIAFLKYLNKSYQDIPKLIAYNPLCTLQKTLNPITGITGIIVKNDKKSMLRFKLKFGFKDIEALNKAMIKINEGLDPPEITYFNFSNELFVREDLNGIVKKLIDYQNHSNCLIKSFDLASFFKHTTYTTIYTFHKMIKNYSNPLGELSKDKKTVRITHYVFAADETEDSIGNRCHFDTSTQH
SIO_010081: DK880_RS00285
subclass of: SO_0000673
so part of: DK880_RS00285
location: complement(71759..72538)
location: region:71759-72538:-1
so has part: feature:71759-72538:-1:exon

WP_109996862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71759-72538:-1:exon

DK880_RS00290
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00290
old locus tag: DK880_00058
so part of: sequence
location: complement(72756..74264)
location: region:72756-74264:-1
so has part: feature:72756-74264:-1:exon
subclass of: SO_0000010

position:72756:-1
position: 72756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74264:-1
position: 74264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72756-74264:-1:exon

DK880_RS00290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00290
old locus tag: DK880_00058
inference: COORDINATES: protein motif:HMM:NF024206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MFHALLVCIKKLIKGRAYINHIDKYGRTPLQLAVIQGNLGVVTALIKEGANVNQADKYGRSPLHLAAQEGKLDCITVLIQAGAEVNQKDKDEWTPLHSAAYNGNLDCMDALIKEGANVNQADEYGRSSLHLAAQEGKLDCITVLIQAGANVNQADKYGGLTPLHLATYESELGCLDALIKEGAEVNQLNKYGRTPLHLAAYQANLDCITALIKEGAEVNQLNKYGRTPLHLVAQEGNLDCMDALIQAGAEVNQKDKDEWTPLHSAAYNGNLDCMDALIKEGAEVNQKDKYGRTPLHSAAQTGKLDCMDALIQAGAEVNQKDKDGRTPLHSAAQRGKLDCMDALIQAGAEVNQKDKDGRTPLHSAAENGKLDCMDALIQVGAEVNQKDKDGWTPLHLAAYNGNLGCMDALIQAGAEVNQKDKDEWTPLHSAAQEGNLNCIIALIKAGAEINQKDNNGQTPLDLAKQSGHQDCINILQAKGAKKIANKIIVRLRTLLRTFLEKI
SIO_010081: DK880_RS00290
subclass of: SO_0000673
so part of: DK880_RS00290
location: complement(72756..74264)
location: region:72756-74264:-1
so has part: feature:72756-74264:-1:exon

WP_109996863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72756-74264:-1:exon

DK880_RS00295
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00295
old locus tag: DK880_00059
so part of: sequence
location: complement(74407..75027)
location: region:74407-75027:-1
so has part: feature:74407-75027:-1:exon
subclass of: SO_0000010

position:74407:-1
position: 74407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75027:-1
position: 75027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74407-75027:-1:exon

DK880_RS00295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00295
old locus tag: DK880_00059
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGWKIAGTIIIRAQIDDIDFKELLNDLDLESPELTKVDNVPFWEAMDMGTNNVYIGSYKDNLIICDNNNVLGTSASFEKNISSIEQRLINHFPDTEICTIVLHSGVNLWGYSVIKNGQKIRARGGSWNDGTFLEYGSPLEQEKELLSQSIIDKDGNRVYLLDDYPGEPFSEDQVGEEFVSDIASRYFGIGLFCSSELLDTMLAGYA
SIO_010081: DK880_RS00295
subclass of: SO_0000673
so part of: DK880_RS00295
location: complement(74407..75027)
location: region:74407-75027:-1
so has part: feature:74407-75027:-1:exon

WP_109996864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74407-75027:-1:exon

DK880_RS00300
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00300
old locus tag: DK880_00060
so part of: sequence
location: complement(75116..75556)
location: region:75116-75556:-1
so has part: feature:75116-75556:-1:exon
subclass of: SO_0000010

position:75116:-1
position: 75116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75556:-1
position: 75556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75116-75556:-1:exon

DK880_RS00300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00300
old locus tag: DK880_00060
inference: COORDINATES: protein motif:HMM:NF012873.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: condensation domain-containing protein
translation: MHQGIKIWSQGSNIKLFVPKNAVLKKEHTDFIKLNRKQILQHLVSNCVYTKDYDILMLKEQSVQPLLSFSQERLWFMDQYEGGSNAYNIEMTYKLSPVIRLDILEQSIRHIVLRHEILRTLIKKDNEGNSYQLVLDSQQHPIEKVG
SIO_010081: DK880_RS00300
subclass of: SO_0000673
so part of: DK880_RS00300
location: complement(75116..75556)
location: region:75116-75556:-1
so has part: feature:75116-75556:-1:exon

WP_162534047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75116-75556:-1:exon

DK880_RS00305
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00305
old locus tag: DK880_00062
so part of: sequence
location: 76273..78024
location: region:76273-78024:1
so has part: feature:76273-78024:1:exon
subclass of: SO_0000010

position:76273:1
position: 76273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78024:1
position: 78024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76273-78024:1:exon

DK880_RS00305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00305
old locus tag: DK880_00062
inference: COORDINATES: protein motif:HMM:NF012869.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MRTIQFILKLIQPYRTYILGNIFVVLCASIDTNLRPYLIKLLINTAMDANRNSLLTISKIYAFVQIVQICLWTFNDWCLIQYSHSLRAYVITLLMERIRNYPYNFYQKHASGSIMAKINDASNLLPDIIFVIIYQFMQVTLSIFFALFLLARIHYILAVEMVIWISFFLIHTYFSISRGNALTMEYTKARANIWGYITDYLSNILNVHCFSREHYEKQRLHNTNSRVIENSKTYGYFLMRIHFFQSVLIALYTICFLSSVTYLQSISYITPGDLVLIFMLNFRIADKLNELLSQLCLFFTNWRTAMGALEVYNFPMEIQDQDNAKPIIVSHGQIIFDKVYFHYEKSKPLFQNISLTIQPRQRVGLVGNSGSGKTTFLNLILRLFNVNAGNILVDGQEVQSITRASLREAISVIPQLPTLFQRTIRENILYGKLDATDDEIIDAAKKAHAHQFIQQLSRGYETVIGAHGTQLSGGQIQRIAIARAFLNSAPILLLDESTSQLDPLTEKKIQISLRYLMQNKTTVIIAHKLSTLLKMDRILVFDQGQIVQDGTHAELLQQTGLYKVLWYAQEQNALIPTMDSVVS
SIO_010081: DK880_RS00305
subclass of: SO_0000673
so part of: DK880_RS00305
location: 76273..78024
location: region:76273-78024:1
so has part: feature:76273-78024:1:exon

WP_109996866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76273-78024:1:exon

DK880_RS00310
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00310
old locus tag: DK880_00063
so part of: sequence
location: complement(78105..78416)
location: region:78105-78416:-1
so has part: feature:78105-78416:-1:exon
subclass of: SO_0000010

position:78105:-1
position: 78105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78416:-1
position: 78416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78105-78416:-1:exon

DK880_RS00310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00310
old locus tag: DK880_00063
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQYSSFVLITAETITKCNRAVLEQINKVALSAALKEVQRHKQLFNNCFCSATQEQEEVQVLKKAINTEKEIFVTPKINFDILIFDDYLIEELHVFIRKIESLK
SIO_010081: DK880_RS00310
subclass of: SO_0000673
so part of: DK880_RS00310
location: complement(78105..78416)
location: region:78105-78416:-1
so has part: feature:78105-78416:-1:exon

WP_109996867.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78105-78416:-1:exon

DK880_RS05060
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05060
old locus tag: DK880_00065
so part of: sequence
location: 79357..79647
location: region:79357-79647:1
so has part: feature:79357-79647:1:exon
subclass of: SO_0000010

position:79357:1
position: 79357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79647:1
position: 79647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79357-79647:1:exon

DK880_RS05060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05060
old locus tag: DK880_00065
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGYVCHFDPIWHMKFCGSFTNKNLLTVYNTYHWNLYNRYEFTYFNFLVGGQGNYKFDHQLSISAFLASISLLASAAADVPVYVSPIRNSLLELHAN
SIO_010081: DK880_RS05060
subclass of: SO_0000673
so part of: DK880_RS05060
location: 79357..79647
location: region:79357-79647:1
so has part: feature:79357-79647:1:exon

WP_204082268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79357-79647:1:exon

DK880_RS00320
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00320
old locus tag: DK880_00066
so part of: sequence
location: 79800..80765
location: region:79800-80765:1
so has part: feature:79800-80765:1:exon
subclass of: SO_0000010

position:79800:1
position: 79800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80765:1
position: 80765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79800-80765:1:exon

DK880_RS00320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00320
old locus tag: DK880_00066
EC number: 6.4.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009184701.1
GO component: GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO function: GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetyl-CoA carboxylase carboxyltransferase subunit alpha
translation: MAVLDFEKPIIELEEKLARMREAARLQNAPELLMAIEKLAHDIRELQQKTFQNLTRWQRVQLARHPDRPHTLDYIEQITEHFIELHGDRLMGDDKAMVGGFAKIEDHIVMLIGCQKGRNIKEKKRHNFGMPNPEGYRKALRLMRLAEKFNKPIVTLIDTPGAYPGLEAEERGQGEAIATTIQAMFSLRVPILSIVIGEGASGGALAIAIGDCVLMLEHTWYSVISPESCSTILWKNRDYKEQAAEILQVTAHDMVNFGLIDGIIKEPVGGAHRNWSIAATLLKENILQHLQQLLSKPIDALLQTRREKFCAMGSIRDTTTQ
SIO_010081: DK880_RS00320
subclass of: SO_0000673
so part of: DK880_RS00320
location: 79800..80765
location: region:79800-80765:1
so has part: feature:79800-80765:1:exon

WP_109996868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79800-80765:1:exon

DK880_RS05065
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05065
so part of: sequence
location: 80974..81129
location: region:80974-81129:1
so has part: feature:80974-81129:1:exon
subclass of: SO_0000010

position:80974:1
position: 80974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81129:1
position: 81129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80974-81129:1:exon

DK880_RS05065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05065
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQVNSYTKLWEGVKAGESDFDCIVERKDKTNSQPVNVVWLLIEDYLAGKYP
SIO_010081: DK880_RS05065
subclass of: SO_0000673
so part of: DK880_RS05065
location: 80974..81129
location: region:80974-81129:1
so has part: feature:80974-81129:1:exon

WP_162534050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80974-81129:1:exon

DK880_RS05070
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05070
old locus tag: DK880_00068
so part of: sequence
location: complement(81290..81832)
location: region:81290-81832:-1
so has part: feature:81290-81832:-1:exon
subclass of: SO_0000010

position:81290:-1
position: 81290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81832:-1
position: 81832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81290-81832:-1:exon

DK880_RS05070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05070
old locus tag: DK880_00068
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLAENCDEASTSNKQKKKLQPTAKAGNMAAENCDEASANKQQKKLQPTAKAGNMAAENCDEASANKQQKKLQPTAKAGNMAAENCDEASANKQQKKPKPTAKAIAEEKLEKIKRIAEEARKEAEAKKESGEKAMEILKKIVYAENQEKAVEQMEKEYKEGNYITCIELYNLVCGTYGLIP
SIO_010081: DK880_RS05070
subclass of: SO_0000673
so part of: DK880_RS05070
location: complement(81290..81832)
location: region:81290-81832:-1
so has part: feature:81290-81832:-1:exon

WP_162534051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81290-81832:-1:exon

DK880_RS00335
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: dnaB
locus tag: DK880_RS00335
old locus tag: DK880_00069
so part of: sequence
location: complement(82240..83724)
location: region:82240-83724:-1
so has part: feature:82240-83724:-1:exon
subclass of: SO_0000010

position:82240:-1
position: 82240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83724:-1
position: 83724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82240-83724:-1:exon

DK880_RS00335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: dnaB
locus tag: DK880_RS00335
old locus tag: DK880_00069
EC number: 3.6.4.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934765.1
GO function: GO:0003678 - DNA helicase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replicative DNA helicase
translation: MTNYTPNVEREQPLRSTVDGLAAHAKYPPHAIELEEGILGALMLEKEALASVIDLLQPDSFYKEAHQEIYKAILHLFSAAEPVDMLTVVNQLRKEGKLAAVGGSYYVSYLTTRISSASNIEFHARAIIEYAIRRKLITLSSKTQQSAYDPTVDVFNVLDRTEQTLFEISDAHVRKGYVAMRTLLVEAFNNLSHRRNRIDGLTGIPSGFTALDRVTSGWQKFDLIIIAARPGMGKTAFVLSALRNAAIDHQIAVAIFSLEMGALQLVNRLIAAEAELSSEKIKQGKLMDHEWEQLLHKTATLSNAPIYVDDTPALSIFELRTKCRRLKTKHNIQLIVIDYLQLMSGDAKRGGSNREQEIASISRALKSLAKELDIAVIALSQLSRAVETRGGSKRPQLSDLRESGSIEQDADLVLFLYRPEYYGLTEDESGNPTQGLAEVIIAKHRNGALDHINLQFIGWYMKFVDGGMSAAAAPLEPVTTVMRSSKVNALDEPF
SIO_010081: DK880_RS00335
subclass of: SO_0000673
so part of: DK880_RS00335
location: complement(82240..83724)
location: region:82240-83724:-1
so has part: feature:82240-83724:-1:exon

WP_109996871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82240-83724:-1:exon

DK880_RS00340
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00340
old locus tag: DK880_00070
so part of: sequence
location: complement(83786..84244)
location: region:83786-84244:-1
so has part: feature:83786-84244:-1:exon
subclass of: SO_0000010

position:83786:-1
position: 83786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84244:-1
position: 84244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83786-84244:-1:exon

DK880_RS00340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00340
old locus tag: DK880_00070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934766.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SufE family protein
translation: MAQDSKAIDQQQDAIIAAFATLGNDRLAMLDYLIDIGTALPTMASCYKTENHLVQGCMSKVWLVDRESEGLLFFQADSNTAITKGLIALLLQVLSGQPGQAIAAAELYFMEAIGMHALIGFQRSSGLAHMIKTIKLKAVARLAQTAPCCHTC
SIO_010081: DK880_RS00340
subclass of: SO_0000673
so part of: DK880_RS00340
location: complement(83786..84244)
location: region:83786-84244:-1
so has part: feature:83786-84244:-1:exon

WP_204082269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83786-84244:-1:exon

DK880_RS00345
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00345
old locus tag: DK880_00071
so part of: sequence
location: complement(84263..85498)
location: region:84263-85498:-1
so has part: feature:84263-85498:-1:exon
subclass of: SO_0000010

position:84263:-1
position: 84263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85498:-1
position: 85498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84263-85498:-1:exon

DK880_RS00345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00345
old locus tag: DK880_00071
EC number: 2.8.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934767.1
GO function: GO:0031071 - cysteine desulfurase activity [Evidence IEA]
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SufS family cysteine desulfurase
translation: MVVTDALDIGQIRELFPILGQRVYGNKALVYLDNAATTHKPLSVIRKAQCFYEQENANIHRGMYAIASQATTALEATRSAVQKFLHAPKPATIVFTAGTTASINLIAATYGEMVLGAGDEVLVSVLEHHSNFVPWQLLCKRKNASLKLLPIDDTGQLDLTQLDQWITKRTKIVALTYVSNAIGTITPIKAIIEQAHAKGAIVVVDGAQAVAHLPIDVAALDCDFFVFSAHKMYGLTGLGVLYGKEEWLERMPPYQAGGGMVDTVRLETVTYQAPPYKFEAGTLPLASIISFSEAIEWLLRIGYAKLAKQEATLVSHALKGLSHIAGIQLIGTAAEKIGIIAFNLSNRHHLDVGLLLDAQGIAVRTGHCCTQPLMHRLGIEGVVRLSFAIYNTLEEIDLFLEALHKIIQKGY
SIO_010081: DK880_RS00345
subclass of: SO_0000673
so part of: DK880_RS00345
location: complement(84263..85498)
location: region:84263-85498:-1
so has part: feature:84263-85498:-1:exon

WP_109996873.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84263-85498:-1:exon

DK880_RS00350
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: sufD
locus tag: DK880_RS00350
old locus tag: DK880_00072
so part of: sequence
location: complement(85546..86835)
location: region:85546-86835:-1
so has part: feature:85546-86835:-1:exon
subclass of: SO_0000010

position:85546:-1
position: 85546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86835:-1
position: 86835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85546-86835:-1:exon

DK880_RS00350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: sufD
locus tag: DK880_RS00350
old locus tag: DK880_00072
inference: COORDINATES: protein motif:HMM:TIGR01981.1
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fe-S cluster assembly protein SufD
translation: MGTFIDWLGEAFALVTPTDPLYSERSLAFNRLSCLNIIENQKENYNFLQDLIRQLTQQAYVSHAVQGSCIQSMPLSAIETYGTAAAIVTFIDGNFSQADSYFDARGQAVQLWKWADLPPEEQQAWLNDYQADLGSEEDLFVLLNHMLCQEIYFLKINDTVDLKDIIVIQNIITGSVPHIMPRLLLKVGASSRVTIVEHNYVIDHTAHFINALTHVLLSAGAELSYYTLGHTPCYQVHTLHCNQKADSSLNHYVFSLGNVKLRMRFITQLNGKHATANLYGLYGLAAEEKVDYRVQIAHRYPQSFSKQHYKGIVGGQATAAFHGSIYVTPEAQQTNAYQTNNAIVLSPLAHHYVKPQLEIYADDVKCSHGATTGALDPTQLFYLQSRGIDADLAKTILLEAFGKEIIDAVPIAELKQYISAKLLAKLAKL
SIO_010081: DK880_RS00350
subclass of: SO_0000673
so part of: DK880_RS00350
location: complement(85546..86835)
location: region:85546-86835:-1
so has part: feature:85546-86835:-1:exon

WP_109996874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85546-86835:-1:exon

DK880_RS00355
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: sufC
locus tag: DK880_RS00355
old locus tag: DK880_00073
so part of: sequence
location: complement(86938..87684)
location: region:86938-87684:-1
so has part: feature:86938-87684:-1:exon
subclass of: SO_0000010

position:86938:-1
position: 86938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87684:-1
position: 87684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86938-87684:-1:exon

DK880_RS00355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: sufC
locus tag: DK880_RS00355
old locus tag: DK880_00073
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020599389.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fe-S cluster assembly ATPase SufC
translation: MLRIEGLQVCIGDKKILNGVNLQVNAGQVHALMGPNGSGKSSLAAVLAGREEYKVIQGSVQLYNQDLLALAPEARAALGLFLAFQYPVEIPGVTTTNFLKTAINQIKKQKGLPPLDAVSFLALLKEKMALLQMDPSLVQRSLNEGFSGGEKKRNEMLQMAMLEPTLAILDETDSGLDIDALKIVAQGINQLRNANNAIILITHYQRLLNYVIPDFVHIFYEGKIIQSGNSLLAHQLEKEGYERMVQPT
SIO_010081: DK880_RS00355
subclass of: SO_0000673
so part of: DK880_RS00355
location: complement(86938..87684)
location: region:86938-87684:-1
so has part: feature:86938-87684:-1:exon

WP_109996875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86938-87684:-1:exon

DK880_RS00360
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: frr
locus tag: DK880_RS00360
old locus tag: DK880_00074
so part of: sequence
location: complement(87728..88279)
location: region:87728-88279:-1
so has part: feature:87728-88279:-1:exon
subclass of: SO_0000010

position:87728:-1
position: 87728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88279:-1
position: 88279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87728-88279:-1:exon

DK880_RS00360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: frr
locus tag: DK880_RS00360
old locus tag: DK880_00074
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934770.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome recycling factor
translation: MQQHLEEAKRDMDKAYAHLQDAFVKLHVGRVVPTMLQGLLVAYYGNPTPLHQLASIQTADARTLAIQPWEQQAIPLIEKAITESQLGFATKNDGRVIMATLPPPSEERRKALVKLIKVEAEKSRIVIRNLRRDYKEIVKAAQKEGISENELKRSEKKLQELTDLYIDKINHLLALKETDVLSI
SIO_010081: DK880_RS00360
subclass of: SO_0000673
so part of: DK880_RS00360
location: complement(87728..88279)
location: region:87728-88279:-1
so has part: feature:87728-88279:-1:exon

WP_239302526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87728-88279:-1:exon

DK880_RS00365
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00365
old locus tag: DK880_00075
so part of: sequence
location: complement(88417..89154)
location: region:88417-89154:-1
so has part: feature:88417-89154:-1:exon
subclass of: SO_0000010

position:88417:-1
position: 88417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89154:-1
position: 89154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88417-89154:-1:exon

DK880_RS00365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00365
old locus tag: DK880_00075
inference: COORDINATES: protein motif:HMM:NF015510.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane lipoprotein carrier protein LolA
translation: MLTVAIGKCRRGVGQFVLFLLFLQLICVGKVAFAAAEAMDEKALAVLEQTVAYYQTLENFRAVYRLSIRYPEEDKLYRSTMVITVRGEQSRCCYNHKETITDGETIWVYDKDLKEVTISSYEKTDYALNFLELCRRYQQDYILAYKGEQIVSLAKKARIQDLVQLIPIANNDWQHITLAIDRATAQIHGWEIVQNDETSYICTLDNFSINLPLADDYFTFDPMAHGDIEIIDLREDEASSDEMES
SIO_010081: DK880_RS00365
subclass of: SO_0000673
so part of: DK880_RS00365
location: complement(88417..89154)
location: region:88417-89154:-1
so has part: feature:88417-89154:-1:exon

WP_109996877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88417-89154:-1:exon

DK880_RS00370
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00370
old locus tag: DK880_00076
so part of: sequence
location: 89276..89512
location: region:89276-89512:1
so has part: feature:89276-89512:1:exon
subclass of: SO_0000010

position:89276:1
position: 89276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89512:1
position: 89512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89276-89512:1:exon

DK880_RS00370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00370
old locus tag: DK880_00076
inference: COORDINATES: protein motif:HMM:NF012253.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MQNLSLKKVWCLYCCFSKEFSIRETAAAGKTPLHKEAANGYVARIEALINGGANVNQKDNNGYAPWMRYKYSYKRNPF
SIO_010081: DK880_RS00370
subclass of: SO_0000673
so part of: DK880_RS00370
location: 89276..89512
location: region:89276-89512:1
so has part: feature:89276-89512:1:exon

WP_109996878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89276-89512:1:exon

DK880_RS00375
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00375
old locus tag: DK880_00077
so part of: sequence
location: complement(89656..90828)
location: region:89656-90828:-1
so has part: feature:89656-90828:-1:exon
subclass of: SO_0000010

position:89656:-1
position: 89656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90828:-1
position: 90828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89656-90828:-1:exon

DK880_RS00375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00375
old locus tag: DK880_00077
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934932.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FtsW/RodA/SpoVE family cell cycle protein
translation: MHGLIKARLKGDPVIWGVAFLLSSLSMLTVYSAVSSLAYRQMHYNTEYYLLKQVILIGMGLSAMWLLHRVDYRYYATIAKAALWSSIPLLLLTWKYGLKLNEASRWLPIPLINKSFQPSDFAQLALIIQVSYHLAKQQKNITSLKITCLPMFVWIGLVSGLIALTNCSAAILLFGTCLVLMYIGRIPVKYLCIITLMGSLMGGGALCLGQRSKTAAKRIENFLKGETSFQVEQAYIAIATGGIMGKGPGKSSQRNFLPHPYSDFIYAILIEEYGLVGALFVMLLYLLLLYRAIVLLPTVANSYAGLLAIGVSLLLVFQALLNMAVAVGLGPVTGLPLPFVSMGGTSIVFTGIALGILLSISRGVIDPELAILQQEAAGIPCNRYKAQNLA
SIO_010081: DK880_RS00375
subclass of: SO_0000673
so part of: DK880_RS00375
location: complement(89656..90828)
location: region:89656-90828:-1
so has part: feature:89656-90828:-1:exon

WP_109996879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89656-90828:-1:exon

DK880_RS00380
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00380
old locus tag: DK880_00078
so part of: sequence
location: complement(90895..92157)
location: region:90895-92157:-1
so has part: feature:90895-92157:-1:exon
subclass of: SO_0000010

position:90895:-1
position: 90895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92157:-1
position: 92157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90895-92157:-1:exon

DK880_RS00380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00380
old locus tag: DK880_00078
inference: COORDINATES: protein motif:HMM:NF019310.2
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MRKPSSILLPAILGNILEYYDFTVYSVFSSVISRAFFPEGSQQKHILWTLIIFTIGVLARPIGGIFFGFIGDRYGRRLALTMAMSGMTLSTLLMGCMPTYEDMGIYAPALLLGLRLLQGLSISGESVGTAIYILEHYRHVKPGFTAGLVNASNLVGTLLASLVGILAEQYPIAFAWRLAFLLGGLMGLAGFFLRLKIVETPVFKQLMEQKKTLKDPFRVVVRTAWKAMFVTFCVGSMASSIVYLVKSYTNVYYHTVLKLDNTIALSYLFYVSFISMLSMPLFGRLADRIGPFKTIVRASIALCLLILPTLVYMTHFISIVHQIIGLTVLGMLSGVMGGVAYFFVLSLFKPEQKFSGASFSYNLGIALFGGSTPPISHWLITQTKLQFAPAFYIMLLAVLFLLSLYLMRSTVNSLMKNATS
SIO_010081: DK880_RS00380
subclass of: SO_0000673
so part of: DK880_RS00380
location: complement(90895..92157)
location: region:90895-92157:-1
so has part: feature:90895-92157:-1:exon

WP_109996880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90895-92157:-1:exon

DK880_RS00385
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00385
old locus tag: DK880_00079
so part of: sequence
location: complement(92331..93338)
location: region:92331-93338:-1
so has part: feature:92331-93338:-1:exon
subclass of: SO_0000010

position:92331:-1
position: 92331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93338:-1
position: 93338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92331-93338:-1:exon

DK880_RS00385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00385
old locus tag: DK880_00079
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGQNILNVSNVSNKTVSAFHIIIIKKRDIIRLGLSILHIVLLMGCGSVKRSSVITFPNEIRVASKHAVPHNMSLAKHRTSTAINSKAGELLRGSSSSNKEVFLHVAATECLADLKALEEKLSWNKSAVLDAMACPNPGDTKFCRHILLDDPNSMADKAVRYAESLLQQGALRGVVDEIMEKAKAIKKKASDLRNLENEEITAALLDVLEAYEEKLLWNINAITRKAKEDTGYCIHTFPNSESITAEVVGHAEALLQQGVSRGIIDKIKKKADTINTIEKEESDLRNVAISLPADGGNNEAALLVPENNSGIAFPVLGIAVMLSSLVLLPLVNHSK
SIO_010081: DK880_RS00385
subclass of: SO_0000673
so part of: DK880_RS00385
location: complement(92331..93338)
location: region:92331-93338:-1
so has part: feature:92331-93338:-1:exon

WP_162534052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92331-93338:-1:exon

DK880_RS00390
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00390
old locus tag: DK880_00080
so part of: sequence
location: 93800..94138
location: region:93800-94138:1
so has part: feature:93800-94138:1:exon
subclass of: SO_0000010

position:93800:1
position: 93800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94138:1
position: 94138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93800-94138:1:exon

DK880_RS00390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00390
old locus tag: DK880_00080
inference: COORDINATES: protein motif:HMM:NF015077.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: divalent-cation tolerance protein CutA
translation: MLSLLYVTCPTLEEGRHIVTILLSERLIVCANIIPTVFSLYQWEGSIQEGKEAILLIKTAVDLVASVSSRIKALHSYTCPLILVIAADATNPAIDAWLKESIHKEHTTVDET
SIO_010081: DK880_RS00390
subclass of: SO_0000673
so part of: DK880_RS00390
location: 93800..94138
location: region:93800-94138:1
so has part: feature:93800-94138:1:exon

WP_109996882.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93800-94138:1:exon

DK880_RS00395
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00395
old locus tag: DK880_00081
so part of: sequence
location: 94349..94975
location: region:94349-94975:1
so has part: feature:94349-94975:1:exon
subclass of: SO_0000010

position:94349:1
position: 94349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94975:1
position: 94975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94349-94975:1:exon

DK880_RS00395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00395
old locus tag: DK880_00081
inference: COORDINATES: protein motif:HMM:NF024491.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospholipase D family protein
translation: MKKFTLRIVGCPITKTQVKYILAIVMAISSLLTHYSACQPFRRGSNAIMIESYFTPEDPCTDIVVSRIRSAKQLILVQAYVLTSLKIVQALLQAHRKKITVQILIDKNALASYGSKVTLLLKQGIPIIIDKTAGLAHSKTMIIDDLYVITGSFNWTHSAQSKNTENLIIITGAENNKQFKENWYKRATAGERLTLLPIHSAYHTSALV
SIO_010081: DK880_RS00395
subclass of: SO_0000673
so part of: DK880_RS00395
location: 94349..94975
location: region:94349-94975:1
so has part: feature:94349-94975:1:exon

WP_109996883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94349-94975:1:exon

DK880_RS00400
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: ppa
locus tag: DK880_RS00400
old locus tag: DK880_00082
so part of: sequence
location: complement(95063..95599)
location: region:95063-95599:-1
so has part: feature:95063-95599:-1:exon
subclass of: SO_0000010

position:95063:-1
position: 95063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95599:-1
position: 95599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95063-95599:-1:exon

DK880_RS00400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: ppa
locus tag: DK880_RS00400
old locus tag: DK880_00082
EC number: 3.6.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934259.1
GO function: GO:0004427 - inorganic diphosphate phosphatase activity [Evidence IEA]
GO process: GO:0006796 - phosphate-containing compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: inorganic diphosphatase
translation: MYIDRIAVGTHFPDDVNVIVEIPMHYNTVKYEMDKVSGALCVDRFIQTAMYYPCNYGFIPHTVAGDGDPVDALVITSYPIMPAACIPTRPIGILLMQDESGPDEKIIALPTTKIAPEFAHIEDIEQVDPLLKKRIIHFFNHYKELEQGKWVKVEGFESKKKAMTYLIDAASKNEPYRQ
SIO_010081: DK880_RS00400
subclass of: SO_0000673
so part of: DK880_RS00400
location: complement(95063..95599)
location: region:95063-95599:-1
so has part: feature:95063-95599:-1:exon

WP_109996884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95063-95599:-1:exon

DK880_RS00410
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00410
old locus tag: DK880_00084
so part of: sequence
location: 95853..96728
location: region:95853-96728:1
so has part: feature:95853-96728:1:exon
subclass of: SO_0000010

position:95853:1
position: 95853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96728:1
position: 96728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95853-96728:1:exon

DK880_RS00410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00410
old locus tag: DK880_00084
EC number: 3.1.21.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934792.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: deoxyribonuclease IV
translation: MHSNRLHNAMLPLIGAHTSTKGGLHQALAHGQAIHANIIQLFTSNQLQWKGRQLNQVALDDWHHTLHSTSISQIMSHANYLINLGSNNESLLAKSRAAFVEEVERCLVLGISYLNFHPGAATGSPMLSCLDRIIHSLSMLEPYFAQDTTLRLLIETTAGQGSTVGYTFEQLAYIIEKVQHIVPIGVCIDTCHIFAAGYDIRTLAGWDATLAEFDATVGLSHLYALHVNDSMCPLGSRKDRHANLGEGMIGMACFQTIMQHPKLHFLPKYLETPNGGAMWEQEIKLLQQFYL
SIO_010081: DK880_RS00410
subclass of: SO_0000673
so part of: DK880_RS00410
location: 95853..96728
location: region:95853-96728:1
so has part: feature:95853-96728:1:exon

WP_204082270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95853-96728:1:exon

DK880_RS00415
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: ruvA
locus tag: DK880_RS00415
old locus tag: DK880_00085
so part of: sequence
location: complement(96779..97378)
location: region:96779-97378:-1
so has part: feature:96779-97378:-1:exon
subclass of: SO_0000010

position:96779:-1
position: 96779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97378:-1
position: 97378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96779-97378:-1:exon

DK880_RS00415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: ruvA
locus tag: DK880_RS00415
old locus tag: DK880_00085
EC number: 3.6.4.12
inference: COORDINATES: protein motif:HMM:TIGR00084.1
GO component: GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO function: GO:0009378 - four-way junction helicase activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Holliday junction branch migration protein RuvA
translation: MIVQLTGEIVYKEPTYLVLNVGGIGYGIHISLYTFTQIKAVALCTLQTVWHVKSDAHILYGFYTLEEKEWWLRLISVSSIGPKTALTILSSLTPSELHKVILDKEEKSLTAIKGIGLKAAQRLILELTDQAQKLDYVAGTTVTLPQQAEMKTDRDAITALVMLGLTQKAAEKAVLTVRSAQGITPLTLEELIKSALQAT
SIO_010081: DK880_RS00415
subclass of: SO_0000673
so part of: DK880_RS00415
location: complement(96779..97378)
location: region:96779-97378:-1
so has part: feature:96779-97378:-1:exon

WP_109996886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96779-97378:-1:exon

DK880_RS00420
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: yidC
locus tag: DK880_RS00420
old locus tag: DK880_00086
so part of: sequence
location: complement(97480..99255)
location: region:97480-99255:-1
so has part: feature:97480-99255:-1:exon
subclass of: SO_0000010

position:97480:-1
position: 97480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99255:-1
position: 99255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97480-99255:-1:exon

DK880_RS00420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: yidC
locus tag: DK880_RS00420
old locus tag: DK880_00086
inference: COORDINATES: protein motif:HMM:NF002356.0
GO function: GO:0032977 - membrane insertase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: membrane protein insertase YidC
translation: MDKNKFIRLLFLSTFSMLLYHHFLKPKQTFQSVVPSVNEAGMPVESFNGAPAQVKTGFPFAAALQGEEKYVTVENALFKVTFNTKGGTIQKVVLKRYKKQEEEVVLLDAQSSCMGLVLPYENVLIETKSLYFKTEALPAYQLKENEQATIVFKLMLTADQYLEQQFELSGNSYQIGYSWKAVGMGAYLTQNNSKPAFCWHMDMQCLETDYNADAAKSTVNYYLLDQTFDQLKTTDKVEQKQIDKPLKWVSLKQRFFSSAIIAQDAFASTTMAMRTPSGSKEITRTVDVSLALSDQDKVNGAGKYSFFFGPNDYKILQQVTKGFEQNLPLGWIIVKWVNQWLIIPLFAFLEKHCANYGLVIFLLVIMVKLLLAPLSYKSFISMAKMKIVKPELDKIKEKYGTNVQKAQMAQVTFYRELGINPLSGCIPILLQMPILLAMFNFFPNAIALRHAPFLWANDLSTYDSVIQLPFTIPLYGNHVSLFTLLMTLSTILYAKSSSQNSPTEGPMKGLTYVMPFTFMLVLNSFPAGLSFYYFISNILTFLQQALTKYFVDEEAIKKKLLARQQKIKQGETTSFQARVAATIQTSNKKKK
SIO_010081: DK880_RS00420
subclass of: SO_0000673
so part of: DK880_RS00420
location: complement(97480..99255)
location: region:97480-99255:-1
so has part: feature:97480-99255:-1:exon

WP_109996887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97480-99255:-1:exon

DK880_RS00425
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00425
old locus tag: DK880_00087
so part of: sequence
location: 99628..100746
location: region:99628-100746:1
so has part: feature:99628-100746:1:exon
subclass of: SO_0000010

position:99628:1
position: 99628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100746:1
position: 100746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99628-100746:1:exon

DK880_RS00425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00425
old locus tag: DK880_00087
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934945.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
translation: MDKNKTFLESGSLHQLATALTASSIAQKRIKATIQAACIWANFFEKRKDPFVNYPTIRSLQTSYQIAYIAVTEMLLELPAVIATILTPSFAAGWVSLEAIAEHFGEETASVLAAIDSLHSCIIQYNTIDQYAPYVEATAPPVTAALLDICDIIRLYYNAPAEEQQEKVLARTSKTFLFELKYFYIPLVHKIRLYDIQTKLADFWFKHTDTINYYAITAQLGKTKLERQRQLDFIVEEVSLIMRKYGIDCIIKKRVKSLYGIWHKMQKLNAPFNQIHDLTAIRIILLDSSNKTLAEEKIICWRVLSILSNLYKPLNTIMRDWISIPKDNGYESLHLSFETHYHGELEVQIRTERMDYIAEQGTATHWQYKYGK
SIO_010081: DK880_RS00425
subclass of: SO_0000673
so part of: DK880_RS00425
location: 99628..100746
location: region:99628-100746:1
so has part: feature:99628-100746:1:exon

WP_109996888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99628-100746:1:exon

DK880_RS00430
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00430
old locus tag: DK880_00088
so part of: sequence
location: complement(100873..101163)
location: region:100873-101163:-1
so has part: feature:100873-101163:-1:exon
subclass of: SO_0000010

position:100873:-1
position: 100873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101163:-1
position: 101163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100873-101163:-1:exon

DK880_RS00430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00430
old locus tag: DK880_00088
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: YtxH domain-containing protein
translation: MKWNLKSFCMLFVVLCLGILVGILAAPETGSVVRSGLMYNLKSYRKKLKALVRQLIGNKYANTNQAKSMGEEVITDVIQGAEKILKELSVLTDQLR
SIO_010081: DK880_RS00430
subclass of: SO_0000673
so part of: DK880_RS00430
location: complement(100873..101163)
location: region:100873-101163:-1
so has part: feature:100873-101163:-1:exon

WP_109996889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100873-101163:-1:exon

DK880_RS00435
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00435
old locus tag: DK880_00089
so part of: sequence
location: complement(101214..102371)
location: region:101214-102371:-1
so has part: feature:101214-102371:-1:exon
subclass of: SO_0000010

position:101214:-1
position: 101214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102371:-1
position: 102371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101214-102371:-1:exon

DK880_RS00435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00435
old locus tag: DK880_00089
inference: COORDINATES: protein motif:HMM:NF013216.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription antitermination protein NusB
translation: MSNSFITRRFIRIKALQYLYGYTIAQQAHKEKAIEQIKTDFLFDCFVHEPVQKAQLQQKQTTAVALFRKTIAKEPFSPLFPSDEESTIGQSVHNNLLYYRQACIQDQTILHKGWNQSKAYICMDYLYILLLLIEWHKMAKAEVATGKLITGNASRLKEALAQHALLAQLYHRNHWKEAIPSETIHWPIAEDCVQAWYRQLLQSAEPSKLLADAAGSIDTIELLECMVQTIIFNNKEVDSFFEKIDIYWSAHASIVKQLLTSTFKLLAAEGLAGFVSFWRKLEARWEKIGSFYDHLVQFTLQDNALYEAMIGEAAKKWTSERMVLLDKLMLKLALTELRRFEEIPMKVSINEYIEIAKLYGTAKSASFVNGMLEELLKKVPAGRDG
SIO_010081: DK880_RS00435
subclass of: SO_0000673
so part of: DK880_RS00435
location: complement(101214..102371)
location: region:101214-102371:-1
so has part: feature:101214-102371:-1:exon

WP_109996890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101214-102371:-1:exon

DK880_RS00440
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00440
old locus tag: DK880_00090
so part of: sequence
location: complement(102399..103514)
location: region:102399-103514:-1
so has part: feature:102399-103514:-1:exon
subclass of: SO_0000010

position:102399:-1
position: 102399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103514:-1
position: 103514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102399-103514:-1:exon

DK880_RS00440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00440
old locus tag: DK880_00090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934782.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
GO process: GO:0006520 - amino acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein
translation: MKVIEQSYFEHAISTDRDGATHFEQKGPEQIVYLQDEATALQAIVAIHDTTLGPAVGGLRFLAYPDEQAALQDVLRLSRSMTYKAAIAGLDVGGGKAVLIKKKGVTLTEAILRKYGSYVERLGGHYITATDYNTSMEHMVQIAKSTRHVIGLPVALGGSGDPSENTAYGLYIAMKAAAKKVFGSDRLVGKKIGVAGVGKVGSCLVSLLCQEKAVVYVTDICPDRLQTLSELHKVVIVTTEHLHSLPLDIYAPCALGASLNAETIPQLNCAIIAGAANNQLAQPEKDGRRLFEREIVYVPDFLANAGGLINAVTELDMRSFNKNLVKQRTEELYSICLHVLDKAAESCCPTEEVAQSLALTRIQSIKNAFVR
SIO_010081: DK880_RS00440
subclass of: SO_0000673
so part of: DK880_RS00440
location: complement(102399..103514)
location: region:102399-103514:-1
so has part: feature:102399-103514:-1:exon

WP_109996891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102399-103514:-1:exon

DK880_RS00445
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00445
old locus tag: DK880_00091
so part of: sequence
location: complement(103573..103661)
location: region:103573-103661:-1
so has part: feature:103573-103661:-1:exon
subclass of: SO_0000663

position:103573:-1
position: 103573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103661:-1
position: 103661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103573-103661:-1:exon

DK880_RS00445
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 247481
locus tag: DK880_RS00445
old locus tag: DK880_00091
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(103625..103627),aa:Ser,seq:gga)
SIO_010081: DK880_RS00445
subclass of: SO_0000673
so part of: DK880_RS00445
location: complement(103573..103661)
location: region:103573-103661:-1
so has part: feature:103573-103661:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:103573-103661:-1:exon

DK880_RS00450
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00450
old locus tag: DK880_00092
so part of: sequence
location: complement(103725..104303)
location: region:103725-104303:-1
so has part: feature:103725-104303:-1:exon
subclass of: SO_0000010

position:103725:-1
position: 103725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104303:-1
position: 104303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103725-104303:-1:exon

DK880_RS00450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00450
old locus tag: DK880_00092
EC number: 3.6.1.-
inference: COORDINATES: protein motif:HMM:NF013854.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: non-canonical purine NTP pyrophosphatase
translation: METIAFVTSNALKLQDVKAILEDNVAFKFIHYDIALPELQASPDEISMNKCVTAATILQGPVVVEDTSLSCPSLNGLPGPYIKTFLAHIGLEGVARLLVSFPDKTAEARSTFAYTAGPNQPVKLFTGSMHGKIIMPHATNGVAGMHWGYIFQPDGHAVCYASLDKTKKNKISHRYKALIQLKDYLINNNVKK
SIO_010081: DK880_RS00450
subclass of: SO_0000673
so part of: DK880_RS00450
location: complement(103725..104303)
location: region:103725-104303:-1
so has part: feature:103725-104303:-1:exon

WP_162534054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103725-104303:-1:exon

DK880_RS00455
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00455
old locus tag: DK880_00093
so part of: sequence
location: complement(104541..106856)
location: region:104541-106856:-1
so has part: feature:104541-106856:-1:exon
subclass of: SO_0000010

position:104541:-1
position: 104541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106856:-1
position: 106856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104541-106856:-1:exon

DK880_RS00455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00455
old locus tag: DK880_00093
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934658.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transglycosylase domain-containing protein
translation: MACMKEQKIIRRIWLFFCMGVLIVPLYLFSVQVDFCNLYGGMPSTALLENPQSALSSELYSADGVLLGKYFRDNRSPIDYEMLSPNIIQALIASEDCRFREHAGIDLRGLARAFFLSVLLRRNRGGGSTLTQQLAKNLFAIRKEVNYEGKCASIPSLRMLVHKTKEWILAVQLERTYTKEEILTMYLNTVTFGNNTYGIKVAVRTFFNKTAAELHVEEAALLVGLLRASTRYNPILHPDKAKYIRNVVLAQMVKHNFIKQAEYDLLCEMPIELHYQEENYEQGIAPYFRAVVRDFLLKWTVENGYDLYADGLRIYTTLDSRIQSHAETAVKEHMAQLQHKFDDHWKGANPWIYENGTEMEDYVETAIQKSDFYKQLVQKHRGDLGAVHAALHTAVPTTLFTWEGPIQVNLTPWEAFKHHRKMLQSGCMAMDPHTGHIKAWVGGINYKHFQYDHVKQGKRQAGSTFKPIVYTVALDNGYLPGDVVVDEPVTFSLPNGETWTGKNAWNYFSGKKLTLRYAMANSYNSITSYLVKALGPELIVNYAHNMGIKGALEAVPSIGLGCSDVSIYEMVSAYATFLNKGVWTEPFFITRIEDKYGNVLQTFIPQNREVMHEDTAALMTYMLQGSLDEGALRGVSPELRKDNEIAGKSGTTSNHSDGWFIGLSQNLCIGVWVGGEDRCIHFRDFANGSGSQTARPIWEKFMLKLYEDRALGYKKAPLVDRSSVSDKVKQIIQIADQEKRQADANSAVNSENYTHKQNKINKEMLDVNKIF
SIO_010081: DK880_RS00455
subclass of: SO_0000673
so part of: DK880_RS00455
location: complement(104541..106856)
location: region:104541-106856:-1
so has part: feature:104541-106856:-1:exon

WP_239302527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104541-106856:-1:exon

DK880_RS00460
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00460
old locus tag: DK880_00094
so part of: sequence
location: complement(106984..108339)
location: region:106984-108339:-1
so has part: feature:106984-108339:-1:exon
subclass of: SO_0000010

position:106984:-1
position: 106984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108339:-1
position: 108339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106984-108339:-1:exon

DK880_RS00460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00460
old locus tag: DK880_00094
inference: COORDINATES: protein motif:HMM:NF013618.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transglycosylase SLT domain-containing protein
translation: MRWLLIVMIWIPPYKGWAAPLSSSAVVPSVVQFAGMRLKLTRGARKRMQAKVNQLIQAKKFFNQVVERTHLFFPIIEKILAKEGIPDDFKFLALHESMLVGDVVSSTNDVGFWQIHPVTALDLKLPIGYPVDERMHLLQSTKAAARLLKGHYAYFNSWLGAMLAYNRGRAGVVKLGIKQYYTAKVVWLDHTTDHYIIAVLATKLAFEKVAGKQKHPLWQLHIYDQGHHGHKLQDLAAYFNIERKLLSEHNKWLKAAVVPYHTKCALVVPISHTHLLRHAAFTPPKQRIDLKKVVSPLALPQQATACTSINYDPRSSNIFPTIVPCHELRNPRFIKANGKLAIIAQKGDTVATLAQLANLTVNRFLTVNDINKTDQPVPGMVYYYSEKGNKGGAHYHVVEIGESVWHVAQRYGIKLKMLLEKNRMREPEFLKVGQIVWLRFIRPRTIPIAYK
SIO_010081: DK880_RS00460
subclass of: SO_0000673
so part of: DK880_RS00460
location: complement(106984..108339)
location: region:106984-108339:-1
so has part: feature:106984-108339:-1:exon

WP_109996893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106984-108339:-1:exon

DK880_RS00465
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00465
old locus tag: DK880_00095
so part of: sequence
location: complement(108459..108779)
location: region:108459-108779:-1
so has part: feature:108459-108779:-1:exon
subclass of: SO_0000010

position:108459:-1
position: 108459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108779:-1
position: 108779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108459-108779:-1:exon

DK880_RS00465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00465
old locus tag: DK880_00095
inference: COORDINATES: protein motif:HMM:NF013365.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit omega
translation: MNLNKKVYLVPRNVDELIASTDNIYETTVIITKRAKQITLRMKEELNRSLEEFTADAAEKDSLDLHRQYTIAQHYEKLPKPVLEATEEFLRGDLTFRYIEEGGAEV
SIO_010081: DK880_RS00465
subclass of: SO_0000673
so part of: DK880_RS00465
location: complement(108459..108779)
location: region:108459-108779:-1
so has part: feature:108459-108779:-1:exon

WP_109996894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108459-108779:-1:exon

DK880_RS00470
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: bamD
locus tag: DK880_RS00470
old locus tag: DK880_00096
so part of: sequence
location: complement(108813..109460)
location: region:108813-109460:-1
so has part: feature:108813-109460:-1:exon
subclass of: SO_0000010

position:108813:-1
position: 108813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109460:-1
position: 109460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108813-109460:-1:exon

DK880_RS00470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: bamD
locus tag: DK880_RS00470
old locus tag: DK880_00096
inference: COORDINATES: protein motif:HMM:NF024915.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane protein assembly factor BamD
translation: MLNLLLIICFISYNLVEASPSGASIRPLSEQKEQVIQLFKQKKYAKACKQLEVVMPLLTRKLDRLEMQFLQAYCKFYIKQYEESSNLFHNFVEQNPAALKREEAVFMRGYSLSFKEMDVHLDQTVTHTAIDYLEAYIADYPSGCYLDKAMQALQTLQERLMKKSLHVAHIYFRLGLYRAAMVVLENFKRTYPASFLAEAVDRLWLESKQKLAKTA
SIO_010081: DK880_RS00470
subclass of: SO_0000673
so part of: DK880_RS00470
location: complement(108813..109460)
location: region:108813-109460:-1
so has part: feature:108813-109460:-1:exon

WP_162534055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108813-109460:-1:exon

DK880_RS00475
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00475
old locus tag: DK880_00097
so part of: sequence
location: complement(109552..111102)
location: region:109552-111102:-1
so has part: feature:109552-111102:-1:exon
subclass of: SO_0000010

position:109552:-1
position: 109552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111102:-1
position: 111102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109552-111102:-1:exon

DK880_RS00475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00475
old locus tag: DK880_00097
inference: COORDINATES: protein motif:HMM:NF024500.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OstA-like protein
translation: MYYFACFLLLVIAIPLVAQEDKVAYKADRLENARLHNKSCKKLEGNVTFTFQPSGMVLTADKAYKYDAEELIEAHGNVKIVDKEGSQLQADVLTYYPEKKWTILDGNVICASSSGTFYTTKLTYDVERKEGKFLDGGKLVQDQMVLTSRTGLYDGGGHKITFSKEVVLVDATYALHCDQLTYHTEKKEAYFQGATKIIYEDNTLLTEQEGSYLPSTHHLVMHNGSWHHQDTVLKADRLEMVDKTNCVAEGNVSLDAKAQAAVIVGERATYSEKEKEKRTEITGQPLLTKVVNNETMYLRADRFLSVEKNSTENGSEQEVHALGQVKLYQENLQGVADGAVYNSKSNTIYLQNKPIVWCAGYQITGEDMYLVIEEEQEKIQLFVNKDLFMVSADPVDNYNQIKGQKMVAYFKAGAIERMSIDGNGESLYFVLGEKNELIGMNHIKCHNMEISMKDNTLEEMKCTPQPIGAFYPVALLTKEQMKLTNFAWYADQWPTKETIVKPTVKAPDSQEIAVKK
SIO_010081: DK880_RS00475
subclass of: SO_0000673
so part of: DK880_RS00475
location: complement(109552..111102)
location: region:109552-111102:-1
so has part: feature:109552-111102:-1:exon

WP_204082271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109552-111102:-1:exon

DK880_RS00480
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00480
old locus tag: DK880_00098
so part of: sequence
location: 111257..112228
location: region:111257-112228:1
so has part: feature:111257-112228:1:exon
subclass of: SO_0000010

position:111257:1
position: 111257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112228:1
position: 112228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111257-112228:1:exon

DK880_RS00480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00480
old locus tag: DK880_00098
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKITKNLYIAWVMVLPLLTGCGKTDDEYLIEQAYIHDYPEKSASKGTVYIATPYNQNAYDSHKALLQGYVLIGKANFTSYPVAPSACIKFGRKVGAEAVIVSLSDKKEVVKYKSVAIPDKEIRKTTEEHTNALGTISDSMIDALCDTLFDSKRNRITITPKNKEETQTIYKYVQQPYVEIHYTHTLLFLKKTNACKAPWEYTIKDFISQQKQQEDDGNYIGEWVHYQIGKLNLLATDSEYVAFIDKDKKYKNKEKCIINRKLKWKNGDIKLRINKSSKQGFYLDKNKIPIPVYILLNQSHQLEIREQQTNKVIITLYHLHPKK
SIO_010081: DK880_RS00480
subclass of: SO_0000673
so part of: DK880_RS00480
location: 111257..112228
location: region:111257-112228:1
so has part: feature:111257-112228:1:exon

WP_109996897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111257-112228:1:exon

DK880_RS00485
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: lysS
locus tag: DK880_RS00485
old locus tag: DK880_00099
so part of: sequence
location: 112450..113973
location: region:112450-113973:1
so has part: feature:112450-113973:1:exon
subclass of: SO_0000010

position:112450:1
position: 112450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113973:1
position: 113973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112450-113973:1:exon

DK880_RS00485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: lysS
locus tag: DK880_RS00485
old locus tag: DK880_00099
EC number: 6.1.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934169.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysine--tRNA ligase
translation: MLELSEQEIIRIQKKEALEAMGVATYPAFVTPITAKAATILNDYKEENKEKYSHVVVAGRIMGRRIMGAASFIELQDNSGRIQLYVQRDSICPDTDKSNYNILFKKLLDIGDIIEATGFVFTTQVGSIAVHVNAFRLLTKALSPLPIVKEVTTQTGTQSYDAFTDPEQRYRQRYVDLIVNPTVRKTFEKRTQLIHIIRDAFNSQGYLEVETPILQPIYGGASARPFVTHHHTLDMPLYLRISNELYLKRLIIGGYEGVYEFAKDFRNEGMSRFHNPEFTQVELYVAYRDYLWMMGYVEQLIEQIALTLQSSTTFPYGEHVMHFQRPWKRFTLFEAIQHFTDYDISCMDEPALRETATQLQVTIEDSMGKGKIIDAIFGEKCEPHLIQPTFITDYPVEMSPLAKRHRNNPALTERFEMICMGKEICNAFSELNDPIDQQKRMEEQGALAARGDAEAMVIDHDFLRALRYGMPPTVGIGIGIDRLTMLMTNASSIQDVLFFPQMRPENK
SIO_010081: DK880_RS00485
subclass of: SO_0000673
so part of: DK880_RS00485
location: 112450..113973
location: region:112450-113973:1
so has part: feature:112450-113973:1:exon

WP_109996898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112450-113973:1:exon

DK880_RS00490
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00490
old locus tag: DK880_00100
so part of: sequence
location: 114188..115915
location: region:114188-115915:1
so has part: feature:114188-115915:1:exon
subclass of: SO_0000010

position:114188:1
position: 114188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115915:1
position: 115915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114188-115915:1:exon

DK880_RS00490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00490
old locus tag: DK880_00100
inference: COORDINATES: protein motif:HMM:NF012706.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MKRVTIILISLALVLGIKFWPKKASQSNTEKVLHLAMETRIQGLDPAVSTSTYETRVIAKVYEGLLEYHYWKRPFELTTNLAVAMPIISEDGLTYTFTLKPGVYFQDNACFPNGQGREITAKDFVYSFKRIADPAVQSPYFSELEPIIKGMDAFRTQLQQHKGDYSIPIEGVQALDNYTLQFTLTKPSTLFLHFLAQPFAYVVPSEAVAYYGADFVNHPVGTGPFTLGQFSPQDNKIILAKNKHFRDKFFPTVTAEEPDLADLADLAEASGKKVPFVDTIIYHTLLETQPRWLQFKEKKIDCLDLVSEYFPDVFKNKQFNPTLHQAGIKFLAKNGGLVGYIGFNCCQKPLDNIKLRQAISLAFDRAAFKKTFREDLGEIVHSFIPSSFVGYSETFTNPYAIYDIEKAKQYLAEAGYPGGQGLPILTVICSNNNKNQLDFFDQYMRKIGIKVEIQPCIFSELVDKLHKKNYMLAAISEQFDYPDASAVFNLLRNPYRGGMTIRDQKFNQLYDKYTQKMLDPAEKASGYAQLNALATELTPALLLPSFPSYVLINKRVKYYRPCPYNFGMEQYVDVA
SIO_010081: DK880_RS00490
subclass of: SO_0000673
so part of: DK880_RS00490
location: 114188..115915
location: region:114188-115915:1
so has part: feature:114188-115915:1:exon

WP_109996899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114188-115915:1:exon

DK880_RS00495
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00495
old locus tag: DK880_00101
so part of: sequence
location: 116165..117874
location: region:116165-117874:1
so has part: feature:116165-117874:1:exon
subclass of: SO_0000010

position:116165:1
position: 116165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117874:1
position: 117874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116165-117874:1:exon

DK880_RS00495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00495
old locus tag: DK880_00101
inference: COORDINATES: protein motif:HMM:NF012706.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MRRNTIILISLALILGIKFWPKRASQNDKEKVLHLAMERRIQGLDPAATINICEVRVLAKAYEGLLEYHYWKRPFELTPNLAVAMPVVSEDGLTYTFTLKPGVYFQDNACFPNGKGREVTAKDFVYSLKRIADPAVQSPYFSELEPIIKGMDAFRTQLQQHKGDYGIPMEGVQALDNYTLQFTLTKPSTLFLHFLAQHFTSVVPQEAVAYYGADFVSHPVGTGPFTLEQFSPQDNKIILTKNKHFRNKFFPAVTAEESDLAEASGKQLPFVDTIIYHTLPEEQPRWLQFKEKKIDCLDVVDEYLPSVFKHKQFNPALHQAGIKLLATNRGFIGYIGFNCCQKPLDNIKLRQAISLAFDRAAFKKTFREDLGEIVHSFIPDSFVGYSETFTNPYAIYDIEKAKQYLAEAGYPGGQGLPILTISGLEHKKAQLDFFDQYMRKIGIKVEVQPYIFSELKEKLHKGNYMLIALHEYFDYPDTAAVFNILRNPYRGAMIIRDQKFNQLYDETTQKIADPAAQVSGYAQLNALATELTPALLFPSLPEYVLVNKRVKYYRPCPYNFGMEQYVDVA
SIO_010081: DK880_RS00495
subclass of: SO_0000673
so part of: DK880_RS00495
location: 116165..117874
location: region:116165-117874:1
so has part: feature:116165-117874:1:exon

WP_109996900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:116165-117874:1:exon

DK880_RS00500
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: accD
locus tag: DK880_RS00500
old locus tag: DK880_00102
so part of: sequence
location: 117961..118824
location: region:117961-118824:1
so has part: feature:117961-118824:1:exon
subclass of: SO_0000010

position:117961:1
position: 117961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118824:1
position: 118824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117961-118824:1:exon

DK880_RS00500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: accD
locus tag: DK880_RS00500
old locus tag: DK880_00102
EC number: 6.4.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934168.1
GO component: GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO function: GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetyl-CoA carboxylase, carboxyltransferase subunit beta
translation: MSLINDNISHWFKRKKKGILTPTALKKDLPNGLWIRTPKGKIVHSKTLRENLQVVPDDGYHFRIGSKEYFSILFDDNNFTELNATLQSTDPLHFVDSKSYQERLQQAEVQTDLTEAIRTAYGRSHGLPLAIACMDFSFIGGSMGSVVGEKIARLINHCLSSQTALLIISQSGGARMMEGSFSLMQMAKTAAKLGQLAEARIPYISLLTDPTTGGITASYAMLGDINMAEPGALIGFAGPRIIRETIGKELPKGFQSAEFLLEHGFLDMIVDRRKLKVTLTQLLQMIG
SIO_010081: DK880_RS00500
subclass of: SO_0000673
so part of: DK880_RS00500
location: 117961..118824
location: region:117961-118824:1
so has part: feature:117961-118824:1:exon

WP_109996901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117961-118824:1:exon

DK880_RS00505
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00505
old locus tag: DK880_00103
so part of: sequence
location: complement(119011..120342)
location: region:119011-120342:-1
so has part: feature:119011-120342:-1:exon
subclass of: SO_0000010

position:119011:-1
position: 119011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120342:-1
position: 120342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119011-120342:-1:exon

DK880_RS00505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00505
old locus tag: DK880_00103
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIPTLNQIQPHRKIKRWVHSHRLLSSIGFSLFLIHSGCRPTNQKPIKLRLPLTADMLPLPEIPEKELHKDKIAENNRFPFYVLPPPVSSQFPVASPPPVSSQFPVASPVPASFPVPVASPVPASSQVPVGGESADSVLVSASVSESAKCGLDGGNRAESDAVSLLLLSALESPESGLNDDSEAKSDVPREIFPQGILQAETINGNRVSPDSKLFERFNRNKPLPPLPLHACELPLKTEEEEKIGGGHTFPLRLPHSPAVELTEHALQKQKSETLCRRVGNFLKNTGSRVQIKRKRKSTPLQEKMTKEKSAMYGRELEEKQYKRVQQGEEALIRIINPEERTFDAALKKLELEEKINSTEQNEKIQQLEQELAPIMGFNDTVSLKVSLVELKQLKQHYHNYPKQSNQYYHYNNNIAQHNYQEHVDDSNDSDHDVDSFESDEDNR
SIO_010081: DK880_RS00505
subclass of: SO_0000673
so part of: DK880_RS00505
location: complement(119011..120342)
location: region:119011-120342:-1
so has part: feature:119011-120342:-1:exon

WP_109996902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119011-120342:-1:exon

DK880_RS00510
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00510
old locus tag: DK880_00105
so part of: sequence
location: complement(120487..120672)
location: region:120487-120672:-1
so has part: feature:120487-120672:-1:exon
subclass of: SO_0000010

position:120487:-1
position: 120487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120672:-1
position: 120672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120487-120672:-1:exon

DK880_RS00510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00510
old locus tag: DK880_00105
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDIKGKQLKKVPLTEREDIKCTKIGQIQGSELGAALMALREQVHDGNSSSSSEEEHNDCSS
SIO_010081: DK880_RS00510
subclass of: SO_0000673
so part of: DK880_RS00510
location: complement(120487..120672)
location: region:120487-120672:-1
so has part: feature:120487-120672:-1:exon

WP_109996903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120487-120672:-1:exon

DK880_RS00515
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00515
old locus tag: DK880_00106
so part of: sequence
location: complement(120715..121125)
location: region:120715-121125:-1
so has part: feature:120715-121125:-1:exon
subclass of: SO_0000010

position:120715:-1
position: 120715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121125:-1
position: 121125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120715-121125:-1:exon

DK880_RS00515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00515
old locus tag: DK880_00106
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVGHVIVHKRFVWLQVKELEIEVIRIMKPKEYTFESALEKLKGIVSRENISQEEGSLIEKVEKEIIRVMNLNNGTFKFVLEDLKYLEKKLIEMEQGMTCRCFIGRSKENKKKIYYDGTSLTEYDKEWDSYDVKLMF
SIO_010081: DK880_RS00515
subclass of: SO_0000673
so part of: DK880_RS00515
location: complement(120715..121125)
location: region:120715-121125:-1
so has part: feature:120715-121125:-1:exon

WP_109996904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120715-121125:-1:exon

DK880_RS00520
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00520
old locus tag: DK880_00107
pseudo: true
so part of: sequence
location: <121083..121604
location: region:121083-121604:1
so has part: feature:121083-121604:1:exon
subclass of: SO_0000010

position:121083:1
position: 121083
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:121604:1
position: 121604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121083-121604:1:exon

DK880_RS00520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00520
old locus tag: DK880_00107
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934168.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: acetyl-CoA carboxylase carboxyltransferase subunit beta
SIO_010081: DK880_RS00520
subclass of: SO_0000673
so part of: DK880_RS00520
location: <121083..121604
location: region:121083-121604:1
so has part: feature:121083-121604:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:121083-121604:1:exon

DK880_RS00525
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00525
old locus tag: DK880_00108
so part of: sequence
location: complement(121942..123987)
location: region:121942-123987:-1
so has part: feature:121942-123987:-1:exon
subclass of: SO_0000010

position:121942:-1
position: 121942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123987:-1
position: 123987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121942-123987:-1:exon

DK880_RS00525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00525
old locus tag: DK880_00108
inference: COORDINATES: protein motif:HMM:NF014283.2
GO function: GO:0003779 - actin binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: WH2 domain-containing protein
translation: MVNKLGSPYPLSRSASSPSSAGKENAAPASAPVSSPKYTKENSGNQQYNVTSSSELPGGDKVGGDTLFNGKGTTEEVIENINMPNNDESKNDFPPLPLPPPEWIAEPKQVEARQNERTHSPSSATESPECKLNIGNQLQSSEFSSKTGVEMASVQETSKSGQYDQSQLPNGGCSRDQAQGGNVSSKMGAENAPFSKADVAGRGNKPFKNNVPLPPPPPPPVFASVSTSVRGNSSQEVPAADQPDTRQALFAQIREGGVTLRKVEVPKDPKEEEKTKQVKNLASSNSYNDESKNDFSPLPLPPPEWIERKSPECKLNIGNQLQSSEFSSKTGAEMASVQETSKSGQYDQSQLPNGGCSRDQAQGGNVSSKMGAENALFSKANVAGRGNKPFKNNVPLPPPPPPVFASVSTSVRGNSSQEVPAADQPDTRQALFAQIREGGVTLRKVEVPKDPKEEEKTKQVKNLASSNSYNDESKNDFSPLPLPPPEWIERKSPECKLNIGNQLQSSEFSSKTGAEMASVQETSKSGQYDQSQLPNGGCSRDQAQGGNVSSKMGAENALFSKANVAGRGNKPFKNNVPLPPPPPPVFASVSTSVRGNSSQEVPAADQPDTRQALFAQIREGGVTLRKVEVPKDPKEEEKTKQVSSPAEALRKRLEEIKKCTQDTSSEEDNDNDDGTNNEWDD
SIO_010081: DK880_RS00525
subclass of: SO_0000673
so part of: DK880_RS00525
location: complement(121942..123987)
location: region:121942-123987:-1
so has part: feature:121942-123987:-1:exon

WP_162534056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121942-123987:-1:exon

DK880_RS00530
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00530
old locus tag: DK880_00109
so part of: sequence
location: 124382..124852
location: region:124382-124852:1
so has part: feature:124382-124852:1:exon
subclass of: SO_0000010

position:124382:1
position: 124382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124852:1
position: 124852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124382-124852:1:exon

DK880_RS00530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00530
old locus tag: DK880_00109
EC number: 3.5.4.33
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934562.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoside deaminase
translation: MNYIEKDIYFMQFALKEAQKAAMLGEIPVGALMVADSKIIARGYNQTEMLQDPTAHAEIIALTAASNYFNSKYLTNCTLYVTLEPCIMCSGALYWAQIKRLVFGATDPTRGYRRIIPFPLHPKTAVTDTILAQESHEQLIEFFKKLRNPHPTGYCG
SIO_010081: DK880_RS00530
subclass of: SO_0000673
so part of: DK880_RS00530
location: 124382..124852
location: region:124382-124852:1
so has part: feature:124382-124852:1:exon

WP_109996906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124382-124852:1:exon

DK880_RS00535
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: serS
locus tag: DK880_RS00535
old locus tag: DK880_00110
so part of: sequence
location: 125136..126413
location: region:125136-126413:1
so has part: feature:125136-126413:1:exon
subclass of: SO_0000010

position:125136:1
position: 125136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126413:1
position: 126413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125136-126413:1:exon

DK880_RS00535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: serS
locus tag: DK880_RS00535
old locus tag: DK880_00110
EC number: 6.1.1.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934660.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine--tRNA ligase
translation: MIDLRRIRENPQAIMDALSKRGMQNAKELVDEVYTLDLEKRRIQAQLEEVSSRLNSMHKTINHPLHQTATVSIGLDQKEATHHLKEKHKILMGAYKSCESALLEKLYQLPNLPAQEIPIGKNAKDNQIIYQVADLPKVKPGDAAHWDLIKKYDLVDFELGNKITGAGFPLYQGRGARLQRALISFFLDKAVEAGYLEVQPPILVNAASAYATGQLPDKEGQIYHITADDLYLIPTAEVSITNMYRDYIVDLAELPIKCAGYTPCFRREAGSWGADVRGLNRLHQFDKVELVQICHPDHSYRQLEEMLTYVRSLLEQLELPYRVVQLCTGDLGFCAAMTYDIEVYSVAQDRWLEVSSISNFETFQANRLALRYKDKKKKSHLLHTLNGSALALPRIMAALLEFNQNPLGISIPKVLQVYTGFDCIV
SIO_010081: DK880_RS00535
subclass of: SO_0000673
so part of: DK880_RS00535
location: 125136..126413
location: region:125136-126413:1
so has part: feature:125136-126413:1:exon

WP_109996907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125136-126413:1:exon

DK880_RS00540
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00540
old locus tag: DK880_00111
so part of: sequence
location: complement(126843..127622)
location: region:126843-127622:-1
so has part: feature:126843-127622:-1:exon
subclass of: SO_0000010

position:126843:-1
position: 126843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127622:-1
position: 127622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126843-127622:-1:exon

DK880_RS00540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00540
old locus tag: DK880_00111
inference: COORDINATES: protein motif:HMM:NF015734.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PASTA domain-containing protein
translation: MRITCIRQIGKHLLYICLLSITLLYTFFYIVLPKLTQQGKTVKVPDLTGMPVEELDDFVHQKRLRYAITDHNDYSSKLPPLTVLQQFPLAGALVKEGRKIYVTLNASHPPSTAMPNLVEASVKQAQLLLKNQGLKLGEIKYVPDITKNTVLEQWHNGHPIAAGQPIHKGSTIDLVAGGGLGKQQVTLPDVVTLPLEEASLLLLEQGIRTGIVYTVQKNSSTKEAIGCIIAQNPTAGSKVPKGTTINLWVVGINAKCKAK
SIO_010081: DK880_RS00540
subclass of: SO_0000673
so part of: DK880_RS00540
location: complement(126843..127622)
location: region:126843-127622:-1
so has part: feature:126843-127622:-1:exon

WP_109996908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126843-127622:-1:exon

DK880_RS00545
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00545
old locus tag: DK880_00112
so part of: sequence
location: complement(127636..128919)
location: region:127636-128919:-1
so has part: feature:127636-128919:-1:exon
subclass of: SO_0000010

position:127636:-1
position: 127636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128919:-1
position: 128919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127636-128919:-1:exon

DK880_RS00545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00545
old locus tag: DK880_00112
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934559.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKRIAVLMGGYTAERHISLESGRNIYNKLAASAKYDVIPLFLSGSPEAQHIFTLPTFLLLKDNADDIHNFLLHPTLWEDTLSLLDPIRAEAHALTDTYAKHSIHQPEILSYSALKKRVDFVFIALHGRPGEDGTLQRLLEQYAIPYNGSGIQTAALTIDKYATNQFLKQQGFHVAQQVIITKQDWDASQTSVISSIERNLVYPLIVKPVDDGCSSGVRKITDRALLQDYITASFNSSLKGTQPLGLSNDLPQSAQLLIENCIEQDPGILHLLEITVGLLTRIDANRATLYELFEPSEVLAANTILTLEEKFLAGEGHNITPARFHKDPAIAKIISQMVQAELKKVAQKLNLQGYARIDAFVKIYPNQKIEVWIIEVNSLPAMTPATCIFHQCARNGYTPFHFIDAIIQYGFTKRNFEKNTESVVYA
SIO_010081: DK880_RS00545
subclass of: SO_0000673
so part of: DK880_RS00545
location: complement(127636..128919)
location: region:127636-128919:-1
so has part: feature:127636-128919:-1:exon

WP_109997687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127636-128919:-1:exon

DK880_RS00550
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: ftsH
locus tag: DK880_RS00550
old locus tag: DK880_00113
so part of: sequence
location: complement(128924..130906)
location: region:128924-130906:-1
so has part: feature:128924-130906:-1:exon
subclass of: SO_0000010

position:128924:-1
position: 128924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130906:-1
position: 130906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128924-130906:-1:exon

DK880_RS00550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: ftsH
locus tag: DK880_RS00550
old locus tag: DK880_00113
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019987273.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent zinc metalloprotease FtsH
translation: MQQKEKNFTYNKAQCIFILLALALSGLVLYISQEQHVIPISEKRFEKMMLDQEVKSVALITNQQLVEVTLKEEALAKEDHQKEIKEKIIWKTSSQVVYTFRIPSIEIFDRNFKDIESKIDPSIRIGYLSEERSKPYSFINWSFLFTLFVIYWFFLRKPGNSIAGPGAQLFNMHTLKATVFDKDNQIRVTFQDVAGMQEAKEEVKEVVDFLKTPEKFTFLGGKIPKGVLLVGPPGTGKTLLAKAVAGEANVPFISLSGSDFVEMFVGIGAARVRDLFKKAKEKAPCIIFIDEIDAIGRARGKANVPGVNDERENTLNSLLVEMDGFSTNSGVIIIAATNRPEVLDVALLRPGRFDRQVSIDNPDIIDREAIIQYHSKELKLESQIRIRQLAEQTPGFSGADLANMCNEAALIAARKNKKFITMPDFQSAIDRIIGGLEKKNKLISPEEKKIVAYHEAGHAIAGWFLPHAHPLVKVSIIPRGIASLGYAQYLPKEQVIYQEDELLDQLAMALGGRAAEELIFGKVSTGALDDLERTTKLAYSLVTIYGMNAKVGNLSFYNSKQTDYAFTKPYSEKTAYTIDAEVREIVEEAYRRVKILLKEKLESVTLLAETLLVKETLFKSDVERLIGKRFSSDTKETISPEEKLSASTEQPTTLPSEHEP
SIO_010081: DK880_RS00550
subclass of: SO_0000673
so part of: DK880_RS00550
location: complement(128924..130906)
location: region:128924-130906:-1
so has part: feature:128924-130906:-1:exon

WP_109996909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128924-130906:-1:exon

DK880_RS00555
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00555
old locus tag: DK880_00114
so part of: sequence
location: complement(131079..131729)
location: region:131079-131729:-1
so has part: feature:131079-131729:-1:exon
subclass of: SO_0000010

position:131079:-1
position: 131079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131729:-1
position: 131729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131079-131729:-1:exon

DK880_RS00555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00555
old locus tag: DK880_00114
EC number: 1.15.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018479580.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: superoxide dismutase
translation: MIFTIPSLPYAYHALEPFIDERTMTLHHTKHHQAYVDNLNKATVATTIAALQGEEVVVLEELVKKIAAYHTVVRNNAGGHFNHSFFWGSLKSNATQLPQPGLLEALTQTFGSFEVFKNKFTEVAMACFGSGWAWLSVAHKDGQLMITSTANQDNPLMDCLPAAAQGFPILGLDLWEHAYYLHYQNRRLDYITAFWHSVHWELIEDRFRNQQLYLVV
SIO_010081: DK880_RS00555
subclass of: SO_0000673
so part of: DK880_RS00555
location: complement(131079..131729)
location: region:131079-131729:-1
so has part: feature:131079-131729:-1:exon

WP_109996910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131079-131729:-1:exon

DK880_RS00560
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00560
old locus tag: DK880_00116
so part of: sequence
location: complement(132326..133507)
location: region:132326-133507:-1
so has part: feature:132326-133507:-1:exon
subclass of: SO_0000010

position:132326:-1
position: 132326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133507:-1
position: 133507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132326-133507:-1:exon

DK880_RS00560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00560
old locus tag: DK880_00116
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQNHKTISRCGSLRLLVLQCSLLFMLCFTYHAALPLSALPHTSPGSITLSIQNQNFINNTEYFNKIMEGETLFGFHFLPSVHLAITNSMGLQIGCIWSRTFGHQWPWMGIRPACSMYYRKQQNVFIVGIFNNAILTLIEPLSSSHQPLEKPHMEGFHFRLTQPTSHIAGWLDWKNCLCKKNNKPEIVTFQLDASYGLKHTNWSIPLQLAVYHLGGQGIPIQSYSLWCAAVGLTYALTPTNTFLKKVQWASYLVGNSYAYNRQAHERACLKVKRPFKEGWGHFHTLTISLHPVEMGVSYWYGNKFSSENMGYPLYQSICIQQEKDSYPTQVTYYEKIRHLLFVSFAKTWEFSNGITLQTSLKPYCDLMHNLLEFGFSLQLSYTGNFHLTALDPL
SIO_010081: DK880_RS00560
subclass of: SO_0000673
so part of: DK880_RS00560
location: complement(132326..133507)
location: region:132326-133507:-1
so has part: feature:132326-133507:-1:exon

WP_109996911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132326-133507:-1:exon

DK880_RS00565
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00565
old locus tag: DK880_00117
so part of: sequence
location: complement(133535..134140)
location: region:133535-134140:-1
so has part: feature:133535-134140:-1:exon
subclass of: SO_0000010

position:133535:-1
position: 133535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134140:-1
position: 134140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133535-134140:-1:exon

DK880_RS00565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00565
old locus tag: DK880_00117
inference: COORDINATES: protein motif:HMM:NF012696.2
GO function: GO:0004089 - carbonate dehydratase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbonic anhydrase
translation: MEKNLQKIIKGYQIFREKYASGDSSIMYNLYREGQQPAILVIACCDARVDPALILQCDPGDLFVVRNVANIVPPYEKDKTHHGTSAALEFGICLLQVQHLIILGHSQCGGIKAFLSKKESKQDDFITNWIALLPALPSLPCSSDAYAKLSLNQSYANCLTFPWIQEKVLKQQLTIHRWFFDIPTGSIYTYHAVQDAYVPLA
SIO_010081: DK880_RS00565
subclass of: SO_0000673
so part of: DK880_RS00565
location: complement(133535..134140)
location: region:133535-134140:-1
so has part: feature:133535-134140:-1:exon

WP_109996912.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133535-134140:-1:exon

DK880_RS00570
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00570
old locus tag: DK880_00118
so part of: sequence
location: complement(134275..134763)
location: region:134275-134763:-1
so has part: feature:134275-134763:-1:exon
subclass of: SO_0000010

position:134275:-1
position: 134275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134763:-1
position: 134763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134275-134763:-1:exon

DK880_RS00570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00570
old locus tag: DK880_00118
EC number: 3.6.-.-
inference: COORDINATES: protein motif:HMM:NF012514.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NUDIX hydrolase
translation: MNLIPFEGGLLALSPVLIEGFCPLSPAIVICGMTYADKLLLLKRHPAVLSACRWNLPGGKVEKNETLRQAMVREIKEETAIDLDESVVHLVKSIYVRKYQSNGKHDFICHVFKTLLLTHSSHNDPIVLLNREHTDYAWVSVSEAYHLDLISGGEAILRLVFE
SIO_010081: DK880_RS00570
subclass of: SO_0000673
so part of: DK880_RS00570
location: complement(134275..134763)
location: region:134275-134763:-1
so has part: feature:134275-134763:-1:exon

WP_109996913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134275-134763:-1:exon

DK880_RS00575
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00575
old locus tag: DK880_00120
so part of: sequence
location: 135039..135512
location: region:135039-135512:1
so has part: feature:135039-135512:1:exon
subclass of: SO_0000010

position:135039:1
position: 135039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135512:1
position: 135512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135039-135512:1:exon

DK880_RS00575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00575
old locus tag: DK880_00120
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MKKGCYFYIAEWVAAWTDGHAKLVYATLLYDLVRYTRLPLSYIKANYPLIVYCFVENTIAIDSRKRLEESLLAIANRFKESLQKEYFSVLYVKLAERLYDLKHASGYKDPTVVQAMAKESLTIDVELAQCYGEPGMAILLKQAAEEALAGAKPTEPV
SIO_010081: DK880_RS00575
subclass of: SO_0000673
so part of: DK880_RS00575
location: 135039..135512
location: region:135039-135512:1
so has part: feature:135039-135512:1:exon

WP_109996914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135039-135512:1:exon

DK880_RS00580
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: mnmA
locus tag: DK880_RS00580
old locus tag: DK880_00121
so part of: sequence
location: complement(135797..136903)
location: region:135797-136903:-1
so has part: feature:135797-136903:-1:exon
subclass of: SO_0000010

position:135797:-1
position: 135797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136903:-1
position: 136903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135797-136903:-1:exon

DK880_RS00580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: mnmA
locus tag: DK880_RS00580
old locus tag: DK880_00121
EC number: 2.8.1.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013452632.1
GO function: GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA 2-thiouridine(34) synthase MnmA
translation: MRIKGRVLVAMSGGIDSSVAAVMLHEQGYEVVGLTMKTWSYAGSGGKKKETGCCSLDAINDARNVAVELGFPHIILDIRKEFGGHVIDHFKSEYLAGRTPNPCILCNTHIKWDALLQRANKLNCAYLATGHYANVREERGRYIISKGVDSKKDQSYALWGVSQESLSRTLFPLGNLTKSAIRSFALERGFTDLVTKSESYEICFIPDNDYRGFLKRQVDGLEEKVKGGEFVLEDGTVVGHHEGYPFYTIGQRKGLHVALGYPVYVIDIQKETNRIVLGSFDRLRREGMVVHKLNLSKYPDLQGKKIDTVTKVRYNDTGTAAVIEQVADQMHVFFGSGVHAITPGQAAVFYEGEDVIGGGWILSAFPKS
SIO_010081: DK880_RS00580
subclass of: SO_0000673
so part of: DK880_RS00580
location: complement(135797..136903)
location: region:135797-136903:-1
so has part: feature:135797-136903:-1:exon

WP_109996915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135797-136903:-1:exon

DK880_RS00585
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: mfd
locus tag: DK880_RS00585
old locus tag: DK880_00122
so part of: sequence
location: complement(137224..140553)
location: region:137224-140553:-1
so has part: feature:137224-140553:-1:exon
subclass of: SO_0000010

position:137224:-1
position: 137224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140553:-1
position: 140553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137224-140553:-1:exon

DK880_RS00585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: mfd
locus tag: DK880_RS00585
old locus tag: DK880_00122
inference: COORDINATES: protein motif:HMM:TIGR00580.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription-repair coupling factor
translation: MVINDLIALYQKNTVITALTAYPIEPASNKVCSIQGVTGSLDALLITALQYNCKQIQLVVTEHKEEALEVYNDCRHLMAPYAVRWLPDSITEVASEETAKNIQHKRTEIIHAINAQQSVSVVVASVAALFEKIIEPSLLHKKAYPISIGQILSIQTIEKVLKEQQFIKVDFVSSEGQFAIRGGIVDIYSATQSLPCRIELWGDQVANIRIFNPKDQKSFKEITHTTIASNQAILQQRKGIAYTSFTSCLPNGSCIWIKNPSKVLHQLQEWHNYYATQPVATTTVPYESAESLLTSLTAFRQIHFESEKTMVPDSTNATNLAYAAEPQPLFKQNFDRLAKDLYKWNQNNYKVFITATTMGQLERINTILEEKEPQPHFIPLIIGLRSGYIDHSAKVVCYTEHQFFNRYYTPSSPKHYPLTKTVPMEGGKNFQVGDYVVHMDHGIGRFAGLHTLAINGHKQEAIRLIYKNNDTIYVNVQELYKVNKYSAKGGEPVNMHKLGTSAWKNKKNAVKKEIKDVAKELITLYAKRKQTVGFAFSKDTPLDMALSASFPYEETADQALAIAAVKEDMERSSPMDRLICGDVGFGKTEIAIRAAFKAAIQGKQVAVLVPTTILALQHYNSFIHRLADFPIQVSYINRFKTKQEIQQTLADTASGKIHILIGTHKLLTKQVRFKDLGLLIIDEEQKFGVMAKEKLKQLRLNIDTLTLTATPIPRTLHFSLMGARDLSILMTPPSNRRPIQTQLQYFNAKVIKQAIEAEIIRNGQVFFIHNKISTIHITAQELSLWLPTARICIAHGQMAGSLLEAKIGQFITGKYDILVATSIIESGMDMPNVNTIIINDSHLLGLADLHQMRGRVGRSNIQAFCYLLIPPDKLLSSEAKLRLRALEEFSALGDGFKLAMSDLDIRGTGDLLGAAQSGFITDIGFETYCKILEEAVTEVKCADFESLFESDLQKKEVYNDCSIETDCEALLPAEYVQNTAHRMMLYTRLNGIKDNTQLTQFKEELVDRFGPLPAATEVLLETLQLRWLAQRMGFQRLVFKCQTLSCHVGADFQKRNPTIWEQLIQYIQQYPSSCQLRKLANSVMLTITKPISTVRDAKELLVDLLVKAT
SIO_010081: DK880_RS00585
subclass of: SO_0000673
so part of: DK880_RS00585
location: complement(137224..140553)
location: region:137224-140553:-1
so has part: feature:137224-140553:-1:exon

WP_109996916.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137224-140553:-1:exon

DK880_RS00590
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00590
old locus tag: DK880_00123
so part of: sequence
location: complement(140889..141104)
location: region:140889-141104:-1
so has part: feature:140889-141104:-1:exon
subclass of: SO_0000010

position:140889:-1
position: 140889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141104:-1
position: 141104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140889-141104:-1:exon

DK880_RS00590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00590
old locus tag: DK880_00123
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKRGLLLWGALLGGVLVWHLIPDAQNKKWKESFYSWLQRISIKTVIRPLLKLLLETLSTLYFKAVLLGCM
SIO_010081: DK880_RS00590
subclass of: SO_0000673
so part of: DK880_RS00590
location: complement(140889..141104)
location: region:140889-141104:-1
so has part: feature:140889-141104:-1:exon

WP_109996917.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140889-141104:-1:exon

DK880_RS00595
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00595
old locus tag: DK880_00124
so part of: sequence
location: complement(141401..141673)
location: region:141401-141673:-1
so has part: feature:141401-141673:-1:exon
subclass of: SO_0000010

position:141401:-1
position: 141401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141673:-1
position: 141673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141401-141673:-1:exon

DK880_RS00595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00595
old locus tag: DK880_00124
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: YtxH domain-containing protein
translation: MKIAYLNILNEKQMMIVYRNLSYFIVGILFGSVIGIILGVLVCDETKRAITKAVNNRAKLFAGGFRSSSEKAMDNVKSSVETVKNTVKDL
SIO_010081: DK880_RS00595
subclass of: SO_0000673
so part of: DK880_RS00595
location: complement(141401..141673)
location: region:141401-141673:-1
so has part: feature:141401-141673:-1:exon

WP_162534057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141401-141673:-1:exon

DK880_RS00600
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00600
old locus tag: DK880_00125
so part of: sequence
location: complement(141831..142421)
location: region:141831-142421:-1
so has part: feature:141831-142421:-1:exon
subclass of: SO_0000010

position:141831:-1
position: 141831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142421:-1
position: 142421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141831-142421:-1:exon

DK880_RS00600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00600
old locus tag: DK880_00125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012472655.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0008097 - 5S rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L25/general stress protein Ctc
translation: MEIIEILGYKRTNLGKADSKKLRIGAEVPGVLYGRDTSLHFYVPMALLRNLVYTPYAHFVDLNIEGSVYRCILQDIQFHPVSEMILHVDFLQIVENKKIKMQIPIAFVGKAVGVTKGGILSKKERKLTVASFPQEMPSVIEVDVSALDLGQIVRVHQIPAKNYTILTLPHTPIASVEIPRALRSAASKEEKKSKKA
SIO_010081: DK880_RS00600
subclass of: SO_0000673
so part of: DK880_RS00600
location: complement(141831..142421)
location: region:141831-142421:-1
so has part: feature:141831-142421:-1:exon

WP_109996919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141831-142421:-1:exon

DK880_RS00605
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: yidD
locus tag: DK880_RS00605
so part of: sequence
location: 142842..143135
location: region:142842-143135:1
so has part: feature:142842-143135:1:exon
subclass of: SO_0000010

position:142842:1
position: 142842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143135:1
position: 143135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142842-143135:1:exon

DK880_RS00605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: yidD
locus tag: DK880_RS00605
inference: COORDINATES: protein motif:HMM:NF013932.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: membrane protein insertion efficiency factor YidD
translation: MQKQLSSYLIRIGIQNPITSLRSIFYKGIKLCCCFLITCYQQWIAPFLLPCCRFQPSCSNYAKKAFANYGLYKAFCLTVRRLLRCHPWCNNGYDPLP
SIO_010081: DK880_RS00605
subclass of: SO_0000673
so part of: DK880_RS00605
location: 142842..143135
location: region:142842-143135:1
so has part: feature:142842-143135:1:exon

WP_109997688.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142842-143135:1:exon

DK880_RS00610
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00610
old locus tag: DK880_00126
so part of: sequence
location: 143344..144807
location: region:143344-144807:1
so has part: feature:143344-144807:1:exon
subclass of: SO_0000010

position:143344:1
position: 143344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144807:1
position: 144807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143344-144807:1:exon

DK880_RS00610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00610
old locus tag: DK880_00126
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:solute symporter family protein
translation: MILHNNLPLIMIVAFLLLTLVIGIYYSRKVNTFREYAIGNKQFATATLVATTLATIYGGAGLLRTVEQVYVQGLFWVLIISFYPIYYWLLAPLMLRMGLFMQHLSVAESIGSIYGKGPRLVAALASTIACIIIIAMQIIAITRAIEMCINLDNSGNAKIMQITLTVTATCILIFYSMLGGIRSVTFTDVLQFLIFTTVIPCTTWFILKATNQPMIVGASSLYQEPKFQLDSCLTTNKLLALVSLFLARLTCVYMPTNIQRIYMAFNPIQARNLLIHTGTFMLIINVCIVLIGLSLFVKAPTLSALQIWPYIFESMPTIFKGFMAISLLAMAMSTADSYLNVCSVIVSHDIIGSIQTSKVLTDKYKLVLARLTALTMGICAMLLAFHKKDLIELMMSSMHFYAPTVIAPFFLALYGFRGSSYTALIGMLTGLSAMLVWNHWVAPMTGIDGTFLCMLANGLAMLMAHYLLPQPTGTGWFPTDKFYTQKQ
SIO_010081: DK880_RS00610
subclass of: SO_0000673
so part of: DK880_RS00610
location: 143344..144807
location: region:143344-144807:1
so has part: feature:143344-144807:1:exon

WP_109996920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143344-144807:1:exon

DK880_RS00615
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00615
old locus tag: DK880_00127
so part of: sequence
location: complement(144896..146896)
location: region:144896-146896:-1
so has part: feature:144896-146896:-1:exon
subclass of: SO_0000010

position:144896:-1
position: 144896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146896:-1
position: 146896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144896-146896:-1:exon

DK880_RS00615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00615
old locus tag: DK880_00127
inference: COORDINATES: protein motif:HMM:NF015714.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ComEC/Rec2 family competence protein
translation: MFPFFRLTLIWISGIITACCYPIALWMTLLFLFIGFLLYFSIVWLSTKAASLSIWSNGIGLWLMFMLSYSHTIGHITERQQNSLSKWLSNDQLCIAYQVTVQKVYPQATSSCLASVTHIKIRNDWYRMNDLIQLYCSKKYGYKPTEGDTLLILGKPIPLVRNAAAKCYERFIYPQANYRQRLQGTKRCFILIEQQQNKKWKEILQDCYRRLLRKEVKETEAIALIETLLFGTKESLSFVLRKAYADTGSMHVLAVSGLHVGMLHWFISKPLTYLLHNGKILNLSTVFILIILWLYAWLCNFAPAMVRATIMLTLARLSLGMGRSLNSGNGLAIAAFITLVWKPFLLFNWGFQFSYMATLGMLYLQRPIQNSIRINNYWLQKIWASTALSIAAQLSTLPLILYYFKQFPLYFILANWIVVPAMFGILMLSLLGIVVSYLPILPSLLGFILAKLIFIINSFVTYIARWPLATIDGFMLNGYSACLLYIVLFATYFFFKYKRLIYPLIVSVCIAFFSFNRIRKIIKEQNSCQLICRNNQTLAFTLRDKYESVNCSDWQGADHLPYSCHYGGYRLAVWYRKVIWAIRSIPTDWYHWHNAKIRVHYLLIEPKLLGELDTLAKVCTLQTVVVYSKQKTKLNYLIRSKIKQLGIELIWLQPDSEKVFTWSTNS
SIO_010081: DK880_RS00615
subclass of: SO_0000673
so part of: DK880_RS00615
location: complement(144896..146896)
location: region:144896-146896:-1
so has part: feature:144896-146896:-1:exon

WP_109996921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144896-146896:-1:exon

DK880_RS00620
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00620
old locus tag: DK880_00128
so part of: sequence
location: complement(147067..147831)
location: region:147067-147831:-1
so has part: feature:147067-147831:-1:exon
subclass of: SO_0000010

position:147067:-1
position: 147067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147831:-1
position: 147831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147067-147831:-1:exon

DK880_RS00620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00620
old locus tag: DK880_00128
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934865.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal ABC transporter ATP-binding protein
translation: MKEQGNSIVEVAGLTVAYANSKVVLQEISFNLPSHKIIGIIGPNGAGKSTLLKAAMGLIAYQSGSIKLLGRAIDKVRRYISYVPQKETVDWDFPASVFDIALLGRYNRLGFFERPNKNDKAITMQCLEQVGMAHLAKRQIGELSGGQQQRVFLARALAQDATLYFMDEPFTGIDITTEKAIITLLKEMVAAGKTIVVVHHALGSVYDYFDWLVLLNHKLMAVGTTKEVFTARLLEKTYGSQFPCFRDYSNGCPL
SIO_010081: DK880_RS00620
subclass of: SO_0000673
so part of: DK880_RS00620
location: complement(147067..147831)
location: region:147067-147831:-1
so has part: feature:147067-147831:-1:exon

WP_109996922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147067-147831:-1:exon

DK880_RS00625
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00625
old locus tag: DK880_00129
so part of: sequence
location: complement(147834..148778)
location: region:147834-148778:-1
so has part: feature:147834-148778:-1:exon
subclass of: SO_0000010

position:147834:-1
position: 147834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148778:-1
position: 148778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147834-148778:-1:exon

DK880_RS00625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00625
old locus tag: DK880_00129
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934864.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zinc ABC transporter substrate-binding protein
translation: MLITRIKNNSIHFYRFCLSLLSLLCICSCADTTSDNVFTILTTTSILADTVRNIVKEDASVVSLMGPGIDPHTYQTTQKDVKKLTHADIIFYNGLYLEGKMSDLLGKIAENRKVYAVGDALDPRQLIYDAAVFPLGVDPHIWFNIKLWKEIVAFISSKLQEARPESAVYYQRNTAVYLEALEVLHQEVTRQIRSIPKAQRVLITAHDAFGYFGRAYDIEVKGLQGVSTVSECGLQDIHHIVQLILERNIKAVFFETSVSDKSMRAVLEGCSHYGYKVKMGGSLYSDALDESNTPAGTYCGMIQANTKAIVNALK
SIO_010081: DK880_RS00625
subclass of: SO_0000673
so part of: DK880_RS00625
location: complement(147834..148778)
location: region:147834-148778:-1
so has part: feature:147834-148778:-1:exon

WP_109996923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147834-148778:-1:exon

DK880_RS00630
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00630
old locus tag: DK880_00130
so part of: sequence
location: complement(148875..149540)
location: region:148875-149540:-1
so has part: feature:148875-149540:-1:exon
subclass of: SO_0000010

position:148875:-1
position: 148875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149540:-1
position: 149540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148875-149540:-1:exon

DK880_RS00630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00630
old locus tag: DK880_00130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934862.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal-dependent transcriptional regulator
translation: MKKLTHTEEDYLKAIYLLSKDNDTVLVSTTAISEFLHTKPASVTDMVQKLHSNGLAVYQKYQGVRLTDKGKKSAVKVVRKHLLWEVFLVDKLKFEWNAIHQVAEQLEHIDSDMLIERLESFLGYPYCNPHGIVIPDAHGKVVAQSSLLLTDITEGTSGIVSAIKNESTAFLQYLSKRNIHLGTKITVIEKIYFDESMDVIIDNHFKVNISRKITDHIMLIP
SIO_010081: DK880_RS00630
subclass of: SO_0000673
so part of: DK880_RS00630
location: complement(148875..149540)
location: region:148875-149540:-1
so has part: feature:148875-149540:-1:exon

WP_109996924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148875-149540:-1:exon

DK880_RS00635
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00635
old locus tag: DK880_00131
so part of: sequence
location: 150416..150799
location: region:150416-150799:1
so has part: feature:150416-150799:1:exon
subclass of: SO_0000010

position:150416:1
position: 150416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150799:1
position: 150799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150416-150799:1:exon

DK880_RS00635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00635
old locus tag: DK880_00131
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: rRNA pseudouridine synthase
translation: MLLLTNDGALAQQLAHPSSQVQKYYHVVLDRTIQADHYHNIQQSILLEDGFTKVDTLTIAVDNPRQLNVALHMGKNRIVRRIFEHFGYTIQKLDRIRYAHFTKKNIPRGKWIFLNPQAVAKLKSLIK
SIO_010081: DK880_RS00635
subclass of: SO_0000673
so part of: DK880_RS00635
location: 150416..150799
location: region:150416-150799:1
so has part: feature:150416-150799:1:exon

WP_162534058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150416-150799:1:exon

DK880_RS00640
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00640
old locus tag: DK880_00132
so part of: sequence
location: 151008..152129
location: region:151008-152129:1
so has part: feature:151008-152129:1:exon
subclass of: SO_0000010

position:151008:1
position: 151008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152129:1
position: 152129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151008-152129:1:exon

DK880_RS00640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00640
old locus tag: DK880_00132
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKQKIITNQIWGIGFIAYNLLLYTLFIASACNKPKKARPIGTQPKSANGNKGVVLPISTASSQAATAPSRPTVTPAQPIATPAQPIAIPAQPIATPAQPIATPAQPERYFERKGDLFFIMERVVSGCNSGFWYNFLEKIKSAFKVSDIKQKYKHSQNSFEIFKNNFYLMDMDKDELWIAYAAIVEPSSNLNYDDIEMVMTVSTANGLPFSSHWGIFRSPLFQMNINQKLQKQPHKNISVSLHAFAARTILQLHADKIYMINAPALEMRDILIKALPDTAIAIGDNLLKEACEEELRNGKLSQEKIPLLDMMQKIPYRIKKEGKSGDGDIILLDPQGIEIKRIDNKEDKNKWFPEIMGTPYIAIDLKALARAG
SIO_010081: DK880_RS00640
subclass of: SO_0000673
so part of: DK880_RS00640
location: 151008..152129
location: region:151008-152129:1
so has part: feature:151008-152129:1:exon

WP_109996926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151008-152129:1:exon

DK880_RS00645
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00645
old locus tag: DK880_00133
so part of: sequence
location: complement(152272..152745)
location: region:152272-152745:-1
so has part: feature:152272-152745:-1:exon
subclass of: SO_0000010

position:152272:-1
position: 152272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152745:-1
position: 152745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152272-152745:-1:exon

DK880_RS00645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00645
old locus tag: DK880_00133
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017733674.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dCMP deaminase family protein
translation: MDKNNITETYDYHTTFIKSAMELAEHSPCIKKKVGAVLVEGGHIIATGHNGPPFGTYHCEEMALTTGCPRSIRGGCALSIHAEQNTILKALGSSLNLKGSTLYVTLSPCLPCARIIFGVGIAKVVYKDSYATYKQLAIEEGLNFLHAYGITVEKYDL
SIO_010081: DK880_RS00645
subclass of: SO_0000673
so part of: DK880_RS00645
location: complement(152272..152745)
location: region:152272-152745:-1
so has part: feature:152272-152745:-1:exon

WP_109997689.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152272-152745:-1:exon

DK880_RS00650
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: murD
locus tag: DK880_RS00650
old locus tag: DK880_00134
so part of: sequence
location: complement(153272..154612)
location: region:153272-154612:-1
so has part: feature:153272-154612:-1:exon
subclass of: SO_0000010

position:153272:-1
position: 153272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154612:-1
position: 154612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153272-154612:-1:exon

DK880_RS00650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: murD
locus tag: DK880_RS00650
old locus tag: DK880_00134
EC number: 6.3.2.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019947860.1
GO function: GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
translation: MKLAILGGGESGTGAALLAQKKGWNVFVSDSIRIATVYKKMLIEHRIPYEEGFHTLAKIADADEVVKSPGIPNQSLIIQQLKKRFIPIIDEIEFAARYAKGKIIAVTGSNGKSTTTYLIYHLLKEAGYQVAVVGNVGHSFAICLTEMDYHYYVIELSSFQLEHMQQFKAAIACLLNITPDHLDRYDYSMEAYVKAKLNIIRNMTAADHFIYPKEDPFLQHYLPPSYKVAPQCYPIAPIQPAVRSGNQQAWYFAVQNHVFTIDRHLLPLQGIHNQYNATVAITAALLSGVTPDRIVTALPTFRGLPHRLEWCGAPRGVDCYNDSKATNVASTMVALHSFYSPVIWIAGGQDKGNDYTALLPLVQEKVKAIICLGKDNRLLFHALRSLAIPIYETKQIAEALRIALSVALPGEVILLSPACASFDLFKNFEERGNQFKESVREIAAML
SIO_010081: DK880_RS00650
subclass of: SO_0000673
so part of: DK880_RS00650
location: complement(153272..154612)
location: region:153272-154612:-1
so has part: feature:153272-154612:-1:exon

WP_109996927.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:153272-154612:-1:exon

DK880_RS00655
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00655
old locus tag: DK880_00135
so part of: sequence
location: complement(154706..154791)
location: region:154706-154791:-1
so has part: feature:154706-154791:-1:exon
subclass of: SO_0000663

position:154706:-1
position: 154706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154791:-1
position: 154791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154706-154791:-1:exon

DK880_RS00655
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 247481
locus tag: DK880_RS00655
old locus tag: DK880_00135
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(154755..154757),aa:Ser,seq:tga)
SIO_010081: DK880_RS00655
subclass of: SO_0000673
so part of: DK880_RS00655
location: complement(154706..154791)
location: region:154706-154791:-1
so has part: feature:154706-154791:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:154706-154791:-1:exon

DK880_RS00660
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00660
old locus tag: DK880_00136
so part of: sequence
location: complement(155019..155654)
location: region:155019-155654:-1
so has part: feature:155019-155654:-1:exon
subclass of: SO_0000010

position:155019:-1
position: 155019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155654:-1
position: 155654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155019-155654:-1:exon

DK880_RS00660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00660
old locus tag: DK880_00136
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934861.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF502 domain-containing protein
translation: MRGEQSLINRLLHYFFRGVLLFIPLGGTLYFISLVLRKIDGIANFSSIPGLGMLIIIVVLTLLGYVGTALLVKSAFSFTEALIQKVPFIRVLYASLKDLTTAFVNSSSKGKFDRPVMVLMDRSMQIYRIGFITKSSLEVLAMPDYIAVYFPNSYDLSGLLLMLPPTLVTPLDLPSAEVMRFILSGGIATFEKEKPTNSTKDNDSEQKNCNE
SIO_010081: DK880_RS00660
subclass of: SO_0000673
so part of: DK880_RS00660
location: complement(155019..155654)
location: region:155019-155654:-1
so has part: feature:155019-155654:-1:exon

WP_109996928.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155019-155654:-1:exon

DK880_RS00665
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00665
old locus tag: DK880_00137
so part of: sequence
location: complement(156055..158532)
location: region:156055-158532:-1
so has part: feature:156055-158532:-1:exon
subclass of: SO_0000010

position:156055:-1
position: 156055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158532:-1
position: 158532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156055-158532:-1:exon

DK880_RS00665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00665
old locus tag: DK880_00137
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDTPLEFDYSFLKAQGIAYIQQLAGKKWTDYGNHDPGITILEVLAFAVMDLQYRTNFYIEDLWANDPDAIEKPNEKQFYRAEEILPSHPLTRWDFLKIVLDVPGVKNANICLSDAPHDIKGGYKVFVELEERIKHSAHETKVLELVKERLYIKRNLCEDFFLIEAMKPISISVKASFEVNNCLGYEEGEAIIAQLLYEFQEFLSPRITFYSISQLLEKGKTIDQIFTGPLLTQGFIDEAELIELKSRSSIYVVELLEKAIKVAGIKRVLHFELFVESEEGHFSSINVPILPDSFLTLNRAESNIMLSYNELPIPINAQKVATLLEDRKGRGTLTKAYLQEEELFVLEGTYRHLEDYVSIQQDFPLLYNVGHEGCAPSEPPENHAKAKQLKSYLLFFDQLFANYLGQLSNVKHTMAIYSDAWNKPAGRLPLDVPCMDDIIKQLESDPSNDLEFIVQKKYLDLKHPLTAIDRKQAIDSTGYVDYINNILESNIRSLEKRSRMLDHLLAYFAERFTIYSLHLYPKNEEKRLEYLNLNKTLFLKDYIEISRDRGRAAYSKETGEGGMQHVSSGFKQRIYRNLGIEDVTDRIFHQIIKRNMYLEKKPAHDTNLDIFLGKSYQTDYSDLFIFQGKYANMRSLVMLYGINEAYYHILKKDNAYSILLYIDKVKQNTVELITDKGAVSSLTQAEHMVQKSLTLFRSLNDQCEGFHLIEHILLRSSDTLEEVNDPYSFRMTLVFPAWPARFQQVSFRHVVEEMVMTESPAHLFITVLWLSFEDMEAFEQRYQTWLQLKANATASKREIDSAAKALMDCIASFSSQLNAACASS
SIO_010081: DK880_RS00665
subclass of: SO_0000673
so part of: DK880_RS00665
location: complement(156055..158532)
location: region:156055-158532:-1
so has part: feature:156055-158532:-1:exon

WP_109996929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156055-158532:-1:exon

DK880_RS00670
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00670
old locus tag: DK880_00138
so part of: sequence
location: complement(158626..159015)
location: region:158626-159015:-1
so has part: feature:158626-159015:-1:exon
subclass of: SO_0000010

position:158626:-1
position: 158626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159015:-1
position: 159015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158626-159015:-1:exon

DK880_RS00670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00670
old locus tag: DK880_00138
inference: COORDINATES: protein motif:HMM:NF016829.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GPW/gp25 family protein
translation: MEENYALNVGWKFPPFFNYHSNAVEMVRGLRAIKESLMILMRTRVGERIMEDDYGCDLTPLAFQPLDLNLETFMVNNIKQAIADHEPRVEVYQVQLTTPTDGEGVIAMHIRYKVRKWGIEDMLQYVYQP
SIO_010081: DK880_RS00670
subclass of: SO_0000673
so part of: DK880_RS00670
location: complement(158626..159015)
location: region:158626-159015:-1
so has part: feature:158626-159015:-1:exon

WP_109996930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158626-159015:-1:exon

DK880_RS05500
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05500
pseudo: true
so part of: sequence
location: complement(159413..>159997)
location: region:159413-159997:-1
so has part: feature:159413-159997:-1:exon
subclass of: SO_0000010

position:159413:-1
position: 159413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159997:-1
position: 159997
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159413-159997:-1:exon

DK880_RS05500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612391.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: DK880_RS05500
subclass of: SO_0000673
so part of: DK880_RS05500
location: complement(159413..>159997)
location: region:159413-159997:-1
so has part: feature:159413-159997:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:159413-159997:-1:exon

DK880_RS00685
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00685
old locus tag: DK880_00139
so part of: sequence
location: complement(160085..160393)
location: region:160085-160393:-1
so has part: feature:160085-160393:-1:exon
subclass of: SO_0000010

position:160085:-1
position: 160085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160393:-1
position: 160393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160085-160393:-1:exon

DK880_RS00685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00685
old locus tag: DK880_00139
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934904.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PAAR domain-containing protein
translation: MPPAAVLLNKHICPMVTPAVPAVPHATGGMVMLGCPTVLIGSFPAARMGDTLLCNGPPPHPDTIVKGSATVLIGKKPAARLGDSTGMGGMLVQGCPTVMIGG
SIO_010081: DK880_RS00685
subclass of: SO_0000673
so part of: DK880_RS00685
location: complement(160085..160393)
location: region:160085-160393:-1
so has part: feature:160085-160393:-1:exon

WP_109996933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160085-160393:-1:exon

DK880_RS00690
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: vgrG
locus tag: DK880_RS00690
old locus tag: DK880_00140
so part of: sequence
location: complement(160455..162248)
location: region:160455-162248:-1
so has part: feature:160455-162248:-1:exon
subclass of: SO_0000010

position:160455:-1
position: 160455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162248:-1
position: 162248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160455-162248:-1:exon

DK880_RS00690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: vgrG
locus tag: DK880_RS00690
old locus tag: DK880_00140
inference: COORDINATES: protein motif:HMM:TIGR01646.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type VI secretion system tip protein VgrG
translation: MDISSNVTFTLKIGSKVLDSTRYPVASIAVDKRINRIPYAKIVLQDGSIQSKTFAITDEDKQIFEVGAAVVIEAGYDGKLAQLFEGVIAKLAIHAQAAAGTTFTITCRDIAYKTTLTPKTVHFEKCKDSDFFKKILGNYSGLSSKLEATDVVHECITQHEISDWDFINLRAEANGQIVVVQDGTISIKKPTTSGRGVCTYTYGVDIINFKAEIDSKDQWEGAAVRVWDSSQQRVMNEKAEEPGEQSMGAISYKKLTAATKQGPAMLSHSGMLTPPEIKKLATSLLNRRRIAKIKGNLTVKGNAKLVHDHLITIDKGAKNFSGDAYVSGVQHRLSSGIWETTLTLGLDAQRYMLQYHDIGVLPAAGMMAPIHGLQLGIVKQITQDPQKNNRILVHLPLIQDKPQEGIWCRLASFYATKQAGSFIMPELEDEVVVGFMNDDIRFPIILGSLYNGKHIPPKMIDDKNLFKSFVSREKLEFTFHDDPEGPEIIIKTATGGLIQLSDKNKSIEIIDQNSNKIVLGTGGVAITSSKDIHLNAQGNISIQSGKDVVLEGMQNVNIKSMNINAQASMKAILNGNASTEVKSGMATIIKGTTVLIN
SIO_010081: DK880_RS00690
subclass of: SO_0000673
so part of: DK880_RS00690
location: complement(160455..162248)
location: region:160455-162248:-1
so has part: feature:160455-162248:-1:exon

WP_109996934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160455-162248:-1:exon

DK880_RS00695
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: lpxK
locus tag: DK880_RS00695
old locus tag: DK880_00141
so part of: sequence
location: complement(162389..163462)
location: region:162389-163462:-1
so has part: feature:162389-163462:-1:exon
subclass of: SO_0000010

position:162389:-1
position: 162389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163462:-1
position: 163462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162389-163462:-1:exon

DK880_RS00695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: lpxK
locus tag: DK880_RS00695
old locus tag: DK880_00141
EC number: 2.7.1.130
inference: COORDINATES: protein motif:HMM:NF014645.2
GO function: GO:0009029 - tetraacyldisaccharide 4'-kinase activity [Evidence IEA]
GO process: GO:0009245 - lipid A biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetraacyldisaccharide 4'-kinase
translation: MLSIWLHLLSWLYGLVVGLRNFLYDKKIKTSRCYIKPLLVNIGNLSAGGTGKTPFVIYLAQLFAEQKVVAVLSRGYKRKSSGFRLLNAHTTAATAGDEPWLIYQKTRQNFNIVVAVCENRIQGIAHITSYRPDVEIVLLDDAFQCRSIIPHVNILLTTFHRPFFTDHLLPLGRLREPQAASKRADIIIVTKCPSNLTKKNMTELQGTLQTYAPSAIFFTYIRYHKAVNIWSHQPVKVPSTLLLVTAIADPWPLYSHLKRAGYNVLHLAFPDHHWFKYKDIVHIINRFHALQDVNKAIITTEKDRARLINQPWTGLLTAFPILYIPMEVGFLPSNGHKECITQIDTLLYKPDRRGSNE
SIO_010081: DK880_RS00695
subclass of: SO_0000673
so part of: DK880_RS00695
location: complement(162389..163462)
location: region:162389-163462:-1
so has part: feature:162389-163462:-1:exon

WP_162534059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:162389-163462:-1:exon

DK880_RS00700
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00700
old locus tag: DK880_00142
so part of: sequence
location: 163584..164717
location: region:163584-164717:1
so has part: feature:163584-164717:1:exon
subclass of: SO_0000010

position:163584:1
position: 163584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164717:1
position: 164717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163584-164717:1:exon

DK880_RS00700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00700
old locus tag: DK880_00142
inference: COORDINATES: protein motif:HMM:NF013909.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Nif3-like dinuclear metal center hexameric protein
translation: MTTKESRLHYNSSMVVVSDIVNYLEQIIQLHCPCHLIKSGLIVGDLHSVVTGVLICLDITEAVLEEAMEQTCNLLITYQPFMLQPLSCITPENYKGRCTIKAIKNNLSIYVFYTNLDPLGNGASHEMAEALALQKNQPLLPWQTKMYKLTTFAPSYAEKKIITALYQAGALLATYEPTRLVGSTAVNTSDVTHSILPNNLNINHTEEKQLTFTLPMYAKEKSIQMLWQAHPYTTVPYYLEQIELTLEDSGIGSIGLLPIPLPAKYFLKYLKTKLALPNLRHTSYTDQLIYKVAIYAGEGSWLVETILDKQIDAFITTDLQYAQFLENNRNTLLIDIGYAAARSPIKKLIAALLLKEFNNIAILCCKTITNPIYHINA
SIO_010081: DK880_RS00700
subclass of: SO_0000673
so part of: DK880_RS00700
location: 163584..164717
location: region:163584-164717:1
so has part: feature:163584-164717:1:exon

WP_109996936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:163584-164717:1:exon

DK880_RS00705
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00705
old locus tag: DK880_00143
so part of: sequence
location: 164721..165470
location: region:164721-165470:1
so has part: feature:164721-165470:1:exon
subclass of: SO_0000010

position:164721:1
position: 164721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165470:1
position: 165470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164721-165470:1:exon

DK880_RS00705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00705
old locus tag: DK880_00143
inference: COORDINATES: protein motif:HMM:NF014630.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: C4-type zinc ribbon domain-containing protein
translation: MDTNIADKLAQLLQIQEMDIQLDNIIKLGGSLPEEVRALEEHIKKLYKEIVNNEGLLSSLQEEIAQKKAFTKQVEKKIQQYESQQMEVRNNREYDIITKELELQQLDIQLAEKFLRTAYGKIDQITLDTEELKKILQTKEKEILTKQQELTLILQANEAESSLLQQKREVLVMELEELLYLNYERIRKSVQNKLAVVSLRKGGCGGCCIVIPPQQKLEIYERNKIVYCEHCGRMLIALEKPTDPSLFVS
SIO_010081: DK880_RS00705
subclass of: SO_0000673
so part of: DK880_RS00705
location: 164721..165470
location: region:164721-165470:1
so has part: feature:164721-165470:1:exon

WP_109996937.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164721-165470:1:exon

DK880_RS00710
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00710
old locus tag: DK880_00145
so part of: sequence
location: 165850..166215
location: region:165850-166215:1
so has part: feature:165850-166215:1:exon
subclass of: SO_0000010

position:165850:1
position: 165850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166215:1
position: 166215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165850-166215:1:exon

DK880_RS00710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00710
old locus tag: DK880_00145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007658330.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraR/DksA family transcriptional regulator
translation: MKETIYSPEELKFFEKILLEKLDKAHYELQVLEKTLSRQEAGLESPGRLFEENAEVIETENIGQLAERQQKFIKQIESAIQRIKNGTYGICVLTGKAIGKERLKVVPHTMYAVDAKAKTPK
SIO_010081: DK880_RS00710
subclass of: SO_0000673
so part of: DK880_RS00710
location: 165850..166215
location: region:165850-166215:1
so has part: feature:165850-166215:1:exon

WP_109996938.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165850-166215:1:exon

DK880_RS00715
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00715
old locus tag: DK880_00147
so part of: sequence
location: 166346..167101
location: region:166346-167101:1
so has part: feature:166346-167101:1:exon
subclass of: SO_0000010

position:166346:1
position: 166346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167101:1
position: 167101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166346-167101:1:exon

DK880_RS00715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00715
old locus tag: DK880_00147
EC number: 5.4.99.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934837.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pseudouridine synthase
translation: MNIERSLLFMSACSLPLIRLNKFISNAGICARRAADRLIASGAITVNGHPVRTVGTKITLSAVVAYKGTILQAAKPTYILLNKPKGYVSTLQDPEGRKTVVDLISKRYCAERVYPVGRLDYDTMGLLLLTNDGALAQQLAHPSSQVQKYYHVILDRAIQADHYHSIQQGILLEDGFTKVDTLTIAVDNPRQLNVALHMGKNRIVRRIFEHFGYTIQKLDRIGYAHLTKKNIPRGKWIFLDLQAVAKLKSLS
SIO_010081: DK880_RS00715
subclass of: SO_0000673
so part of: DK880_RS00715
location: 166346..167101
location: region:166346-167101:1
so has part: feature:166346-167101:1:exon

WP_239302528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166346-167101:1:exon

DK880_RS00720
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00720
old locus tag: DK880_00148
so part of: sequence
location: complement(167213..167677)
location: region:167213-167677:-1
so has part: feature:167213-167677:-1:exon
subclass of: SO_0000010

position:167213:-1
position: 167213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167677:-1
position: 167677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167213-167677:-1:exon

DK880_RS00720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00720
old locus tag: DK880_00148
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGNTSILFIYNYVCVWFTALRMRRLICFLFIGIATLSCSQADRQYVCKVPDSIKKCFSFFGMGKRSNIHIDNKDKRIWLLKFKRRECLVDKEAEWDPIEVGMVVEKSIADFHMDRKGYMNEEVWATLTQEERLNIVRAVVYSEIEEAFRIKFRK
SIO_010081: DK880_RS00720
subclass of: SO_0000673
so part of: DK880_RS00720
location: complement(167213..167677)
location: region:167213-167677:-1
so has part: feature:167213-167677:-1:exon

WP_109996939.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167213-167677:-1:exon

DK880_RS00725
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00725
old locus tag: DK880_00149
so part of: sequence
location: complement(168547..169542)
location: region:168547-169542:-1
so has part: feature:168547-169542:-1:exon
subclass of: SO_0000010

position:168547:-1
position: 168547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169542:-1
position: 169542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168547-169542:-1:exon

DK880_RS00725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00725
old locus tag: DK880_00149
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIFFIRNSLLWVLAIFSVCCTHQSTYIGEKPLIKRIFGCNTREQAEARAQDRHKVENNKRGRETLNQKNSRLTNRMTNKVPNFTAYVFPLPADRHNNFYHIEQQPGQIGVSSFQKFREALKAFREEHGAMLPEMQILIEKLQEVREGLCDISEDNEMLYAQIDQVTNICIEYEQNINAKNQIINAQKKDFQELDDLYQKVKDLYFNSDYQLYKLKSALEEKSKSRHEIKEKYEELYQLYQEQVEQIDQYKRDTKKKEGLISKLKQEVHNYEEREEEAYTCLKSCYEKMQREKDRCNSILEEQSETISRVKKKEEIIEKSIKEIRSIMESKR
SIO_010081: DK880_RS00725
subclass of: SO_0000673
so part of: DK880_RS00725
location: complement(168547..169542)
location: region:168547-169542:-1
so has part: feature:168547-169542:-1:exon

WP_162534061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168547-169542:-1:exon

DK880_RS00730
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00730
old locus tag: DK880_00150
so part of: sequence
location: complement(169849..170217)
location: region:169849-170217:-1
so has part: feature:169849-170217:-1:exon
subclass of: SO_0000010

position:169849:-1
position: 169849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170217:-1
position: 170217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169849-170217:-1:exon

DK880_RS00730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00730
old locus tag: DK880_00150
inference: COORDINATES: protein motif:HMM:NF014130.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome-binding factor A
translation: MVHMHAVKSEQLARLLQKELGMLFLQEAAALLGPSLVSVTAVTMRNADSSARVYLSVALYEQKAVLLQKITRHKNSIRKLLAKRIAHKMRRVPDLKFYIDNTVRQGDRITSLIDQLDLSMDN
SIO_010081: DK880_RS00730
subclass of: SO_0000673
so part of: DK880_RS00730
location: complement(169849..170217)
location: region:169849-170217:-1
so has part: feature:169849-170217:-1:exon

WP_109996941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:169849-170217:-1:exon

DK880_RS00735
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00735
old locus tag: DK880_00151
so part of: sequence
location: complement(170254..171243)
location: region:170254-171243:-1
so has part: feature:170254-171243:-1:exon
subclass of: SO_0000010

position:170254:-1
position: 170254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171243:-1
position: 171243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170254-171243:-1:exon

DK880_RS00735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00735
old locus tag: DK880_00151
EC number: 1.2.4.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009285051.1
GO function: GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity [Evidence IEA]
GO process: GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyruvate dehydrogenase complex E1 component subunit beta
translation: MRQIQFREALREAMMEEMQRDDAIFLMGEEVAEYGGAYKVSQGMLGHFGPERVIDTPISEGGFAGLGVGAAMNGLRPIIEFMTFNFSLVAIDQIVNGAAKLYAMSGGQYHVPIVFRGPTGNAGRLAAQHSQNFENWYANCPGLKVVVPSNPYDAKGLLKSAIRDDDPVVFMESELMYGDIGAVPSTEYLLPIGTAHVQQTGRDVTLVSFGKMVKVAHEAARTMQAEGVSVELIDLRSVRPLDIATIVQSIKQTNRLVIVEEAWPLGSIASEIAYQVQKQAFDYLDAPIQKVTNLDVPLPYAPTLVEAVLPNVAKTVAALQTVLYRKTSH
SIO_010081: DK880_RS00735
subclass of: SO_0000673
so part of: DK880_RS00735
location: complement(170254..171243)
location: region:170254-171243:-1
so has part: feature:170254-171243:-1:exon

WP_109996942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170254-171243:-1:exon

DK880_RS00740
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00740
old locus tag: DK880_00152
so part of: sequence
location: complement(171372..172175)
location: region:171372-172175:-1
so has part: feature:171372-172175:-1:exon
subclass of: SO_0000010

position:171372:-1
position: 171372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172175:-1
position: 172175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171372-172175:-1:exon

DK880_RS00740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00740
old locus tag: DK880_00152
inference: COORDINATES: protein motif:HMM:NF014510.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diadenylate cyclase
translation: MPYNLPPCMQEISCLDVVDILLVALLLYIVYKLIEGSTAIKIALGFGIIYLCYRVVEALKLRYLGIIFSKFTGLAPLFSVILFQREIRYFLSTLGKGAGIGKGIVAQLFPWLFPQKIEIDVTPVVKAVQVLGRGNIGALIVFTKDADLRYYEASGDLIDAVVSSRLLIAIFNKESPLHDGAVIIHNNKIAAARCILPVTENPNVASYFGLRHKAALGLTEITDTLAVVVSEESGQVSIARNGKIESNLSVQEIRSTIKDYLNKEWRG
SIO_010081: DK880_RS00740
subclass of: SO_0000673
so part of: DK880_RS00740
location: complement(171372..172175)
location: region:171372-172175:-1
so has part: feature:171372-172175:-1:exon

WP_109996943.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171372-172175:-1:exon

DK880_RS00745
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00745
old locus tag: DK880_00153
so part of: sequence
location: complement(172843..173484)
location: region:172843-173484:-1
so has part: feature:172843-173484:-1:exon
subclass of: SO_0000010

position:172843:-1
position: 172843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173484:-1
position: 173484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172843-173484:-1:exon

DK880_RS00745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00745
old locus tag: DK880_00153
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: E3 ubiquitin protein ligase
translation: MVKFFKEIFLLWASLLFTAGTCSLSNKNPREEQELPENVLNRRNQRGNQEQQQQEQTARTCSLSNKNPRKEQELPKNVLNRRSQRGNQEQQQQKQIDKRIEDQEWLELPQEERLNIIRAIICSEIDKEQREKEDQQEDYCVICMHQMDGEGEPECSKVTLPQHIDQNGRMVCGHAFCLSCLCRSIKMQLVCPICRTTINEAFIKNIKNKTPLE
SIO_010081: DK880_RS00745
subclass of: SO_0000673
so part of: DK880_RS00745
location: complement(172843..173484)
location: region:172843-173484:-1
so has part: feature:172843-173484:-1:exon

WP_109996944.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172843-173484:-1:exon

DK880_RS00750
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00750
old locus tag: DK880_00155
so part of: sequence
location: complement(174257..175288)
location: region:174257-175288:-1
so has part: feature:174257-175288:-1:exon
subclass of: SO_0000010

position:174257:-1
position: 174257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175288:-1
position: 175288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174257-175288:-1:exon

DK880_RS00750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00750
old locus tag: DK880_00155
EC number: 5.4.99.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934936.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RluA family pseudouridine synthase
translation: METFSSSYPYKLYRITVSEADAAIRIDKFLSDALQVSRNKIQEAIAHQCIAVNNKAILKANYLVQPQDTITASIFFPPHLDSLIPEDKALDIVYEDEDLLVVHKPARMVTHPDKTHQTGTLANALLHYYKHFPLKDQLPTRPGLVHRLDKGTSGLLVVAKSSASLLALEKQFYDHKVVRTYYALIWGNPKEDKGSIGVPLIKSSYKCQVAVNSPMVGKGKHAVTHYQVIERFHHVALVKCTLETGRTHQIRVHMQHIGHPLFGDPYYGGTRIVSGQQYASYKAFVHNCFKLMPHQALHAAVLGFTHPIKHSFLSFEAALPENFAKLIEKWKKYVAAAIGHHAK
SIO_010081: DK880_RS00750
subclass of: SO_0000673
so part of: DK880_RS00750
location: complement(174257..175288)
location: region:174257-175288:-1
so has part: feature:174257-175288:-1:exon

WP_109996945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174257-175288:-1:exon

DK880_RS00755
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00755
old locus tag: DK880_00156
so part of: sequence
location: complement(175291..175704)
location: region:175291-175704:-1
so has part: feature:175291-175704:-1:exon
subclass of: SO_0000010

position:175291:-1
position: 175291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175704:-1
position: 175704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175291-175704:-1:exon

DK880_RS00755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00755
old locus tag: DK880_00156
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRIDLWKIGFCVAVGMYRLYSLLTSSSVEEEDDRPSVRTNKAPILMQAQAIHQEATPQEAIPQEAIPIRHTVGQLPSPKLAAMQRKKQEGKEGVGQGLPAIRSGSLTVGIEKSASRRRKFFRSAFLMQELVASKFI
SIO_010081: DK880_RS00755
subclass of: SO_0000673
so part of: DK880_RS00755
location: complement(175291..175704)
location: region:175291-175704:-1
so has part: feature:175291-175704:-1:exon

WP_109996946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175291-175704:-1:exon

DK880_RS00760
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: infB
locus tag: DK880_RS00760
old locus tag: DK880_00157
so part of: sequence
location: complement(175795..178449)
location: region:175795-178449:-1
so has part: feature:175795-178449:-1:exon
subclass of: SO_0000010

position:175795:-1
position: 175795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178449:-1
position: 178449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175795-178449:-1:exon

DK880_RS00760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: infB
locus tag: DK880_RS00760
old locus tag: DK880_00157
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934934.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-2
translation: MNHNEKKKIRLSQVARQLNVSTATIVAFLEKKGFIIAPNPNVKITVEQFDLLSVEFISASVDKREAAQVTIGKTYKHLGYDQAENKPKAVTKATQEVKKKTESHYEAAIPVLPSLKRVGKIILESDKGIAKAVERPSVPPQEAQKETDKKASVSVPLKDNSLAETSKRDKIDFSILGDLKRPTVVGEMVIEQRSRQSSYTAPAKSAIKRVTPIKTSKGVKWTKSPKSPTVFAHKEKKSKRLGVEEKTENVSVQAVEGQIGKTFATLHQTSGSSTRAKYKKEKRTAHLAAEGQRQHQKQSEASVLKIMEFASASELASFMKVTVQEVLSTCMSLGMIVSINQRLDAETITVVADEFGYQVEFMDVHDEEEKDSSSEAVVGEWEERPPIVTIMGHVDHGKTSLLDYIRATKVTAKEIGGITQHIAAYSIVTESNKKIVFLDTPGHEAFTAMRTRGARITDIVVIVVAADDSVMTQTKESISHAQVAGCAIIIAINKMDKPQANPKKVKEDLANLNILVEEWGGKYQCQEISAKTGEGVGALLDKILLEASLLELKAMPVRKAKGTIIESFLDTGRGYVATGIVQDGTLHIGDIVLAGVYYGKVKALLDHQGMAHQSATPSMPVQLLGLNGAPRAGDIFRVIGSMKEAGELAQKKQKVWREQTLRTKAQLTLDEIGRRLAVGNFNELHVIIKGDVDGSIEALAAALLSLSHEEVQVKILHKCVGAVSESDVLLAAATSAIIIAFHIKIPSQAKKLAEKEGVIIKQYDIIYTAIDDIRHTMQNLLAPAIEEIPTGRAEVKKVFSISKVGNIAGCQVQSGFVNQANPIRVIRNEKVIFTGTIHTLKHGLDEIKQAKAMSECGIHIKNFDTVETGDIIEGFERKETKRNL
SIO_010081: DK880_RS00760
subclass of: SO_0000673
so part of: DK880_RS00760
location: complement(175795..178449)
location: region:175795-178449:-1
so has part: feature:175795-178449:-1:exon

WP_109996947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175795-178449:-1:exon

DK880_RS00765
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: nusA
locus tag: DK880_RS00765
old locus tag: DK880_00158
so part of: sequence
location: complement(178481..179722)
location: region:178481-179722:-1
so has part: feature:178481-179722:-1:exon
subclass of: SO_0000010

position:178481:-1
position: 178481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179722:-1
position: 179722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178481-179722:-1:exon

DK880_RS00765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: nusA
locus tag: DK880_RS00765
old locus tag: DK880_00158
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934933.1
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination factor NusA
translation: MDSNKLIESFAEFARSKNIDKPTVIRILEDVFRSIILSRFGYSDNFDIIINLDKGDLQIWRFREIVEDHAPDVAVPTKIALREARKIEADFEVGEELSEEIKITDFGRRTVLAAKQTLIQKVQELAKETLYEKYKQLIGCLIVAEVHQLLSREIILLDDESNELFLPKAEQIPKDYFKKGAYVRAIVHKVELYNTLPRVILSRASPLFLERLLENEIPEIQDGLIAVKKIVREPGSRAKVAVESFDDRVDPVGACVGIKGTRIHGVTKELQHENIDIINYTDNLELYIARSLSPACINRVVQMSERIAVYLDSDQVALAIGKGGQNIKLASKLIGKEIDVYRDNAADPKEEDIPLSAFSETIGPWVVEALHKIGLDSARSVLSLPKEVLEQRVDLEKETVDEIYAILHQVLSG
SIO_010081: DK880_RS00765
subclass of: SO_0000673
so part of: DK880_RS00765
location: complement(178481..179722)
location: region:178481-179722:-1
so has part: feature:178481-179722:-1:exon

WP_109996948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:178481-179722:-1:exon

DK880_RS00770
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rlmB
locus tag: DK880_RS00770
old locus tag: DK880_00159
so part of: sequence
location: complement(180105..180869)
location: region:180105-180869:-1
so has part: feature:180105-180869:-1:exon
subclass of: SO_0000010

position:180105:-1
position: 180105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180869:-1
position: 180869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180105-180869:-1:exon

DK880_RS00770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rlmB
locus tag: DK880_RS00770
old locus tag: DK880_00159
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934331.1
GO function: GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO process: GO:0009451 - RNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
translation: MTSFKHIATDLTHLIFGSRAVIESILAGQPIEKVFLQSSKWQTPLTKELYTLIRQHAIPYTYLPVAKFKQWINKNHQGVVAIRSPIVFSVVEHVVQASYEKGELPLLVVLDGVSDVHNVGAIARTAACMGVHALVLPTQGSASITAVAMKTSAGALATLPVCRTANLSHTLAYLQAAGLTIIACHEKAAQPLCQVDLTSPVALILGDEAMGIAAKHLTHALHQVSIPIQGPIASLNVSVAAGMLLYEVLRQRNR
SIO_010081: DK880_RS00770
subclass of: SO_0000673
so part of: DK880_RS00770
location: complement(180105..180869)
location: region:180105-180869:-1
so has part: feature:180105-180869:-1:exon

WP_109997691.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:180105-180869:-1:exon

DK880_RS00775
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00775
old locus tag: DK880_00160
so part of: sequence
location: complement(181261..184734)
location: region:181261-184734:-1
so has part: feature:181261-184734:-1:exon
subclass of: SO_0000010

position:181261:-1
position: 181261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184734:-1
position: 184734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181261-184734:-1:exon

DK880_RS00775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00775
old locus tag: DK880_00160
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:solute symporter family protein
translation: MTIDIDLMIIVVFLAATLAIGLYCSRGISTFRDYAVGDRRMPTFVIVVSMIATMYGGATISHRLEMYYHRGIYMLIIDLILPLGLYLASRFIIIRMKRFIGDFSIAASMGKIYGPVIQIITAMLGMMMSIMILSAQFKVGLMVIKICSFFKAAEYASYYTIAVSLLVIIYATFGGARSVALTDVYQFFLFSICFPVLIFLLLYHAPNLLNGWKKLIALPQFNFTEIFTNKTDLFLNITWYSIFLFDPAYTQRIYMSSSIQQAAKVFLRSAIARIIFPLVFLIVAVALHISGHKIPENQNLLNYIMHFSYFPGMQGLLVTATIALLMSTADSYLHIASTLFTNDIWPIITNTSKNKPSLRTARIISIVIGAISIFIVFHTDNVVQLVFKAIYIYVPTINVLFITTCFGFIPRTSAVLYNIMISASLATYDVFIQEKVIREIDWLKAFFYSVCILATIHYILPKKANTGWVGIPDSSAWDLQNQITKRWWLERVQRLKTLFTSSYRVSVFPTQERTFVAVGSYTILNAIIALCFIQRQYFLPYVYLYMAVMALGTILALYPALHAYRKGGIPLLHDLWPMLLFLLLFIAPLQFAKLGHYSPMVCALLIASISLSIVLLSVECSSMLLLCALLIHRFLLPIRFMDLFWESFRHASVIELVLATAVVASTLVGFVLYKYLRDKATAKLKIIELTRTYEQRISLEAIYSQAHWARLDATAGGTLLRAMGVNLQETLCPIARNDPHKVENEITLFNKKLQKFSDCLAWRAQEERSLKLNKKLIQPIPLESTILKVNQYILDLGGPLALLFRKQTDVAEIVVDPALLECLLLLNLWAISKGQQATDHIVTLTLAATTLQYGLAAETTADLPSLILPALACCFSTDTSLPNLKPSYRITAMNANITLPASEAQFYQLESKQIVEAHGGYVEIIESPTQVSCLYVFPLDGRKVMRFKTYDPADLVANALAETAESLAQEQELIALLTAQTTLKEELIQQTIAFIKKAHGLVRRKSGSPYYTHPMAVAKLLLEATQDPATILAGLLHDIVEDTPVTLHQLELIYGAEVAAIVDQVTHYNTNGYPWELDKVENKNILHQCRDIRVVQVKLADRLHNMRTLSVRKPSDQQRIAKETLAFYIPWGKNHKAPQQWLAEMQHICEGIIAKQL
SIO_010081: DK880_RS00775
subclass of: SO_0000673
so part of: DK880_RS00775
location: complement(181261..184734)
location: region:181261-184734:-1
so has part: feature:181261-184734:-1:exon

WP_109996949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181261-184734:-1:exon

DK880_RS05075
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05075
old locus tag: DK880_00161
so part of: sequence
location: complement(185143..185313)
location: region:185143-185313:-1
so has part: feature:185143-185313:-1:exon
subclass of: SO_0000010

position:185143:-1
position: 185143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185313:-1
position: 185313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185143-185313:-1:exon

DK880_RS05075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05075
old locus tag: DK880_00161
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLGHIDVMIIGLALIGTLVIGIYYGRGIKTFQKYAVGSRKMATSVITLSLVATCGL
SIO_010081: DK880_RS05075
subclass of: SO_0000673
so part of: DK880_RS05075
location: complement(185143..185313)
location: region:185143-185313:-1
so has part: feature:185143-185313:-1:exon

WP_162534062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185143-185313:-1:exon

DK880_RS00780
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00780
old locus tag: DK880_00162
so part of: sequence
location: complement(185511..185885)
location: region:185511-185885:-1
so has part: feature:185511-185885:-1:exon
subclass of: SO_0000010

position:185511:-1
position: 185511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185885:-1
position: 185885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185511-185885:-1:exon

DK880_RS00780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00780
old locus tag: DK880_00162
inference: COORDINATES: protein motif:HMM:NF024724.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MLHDIVEDTPVTLHQLELMYGAKVAAIVDQVTHYNTNGYPWELDKVENKNILHQCRDTRVVQVKLADRLHNMRTLSARKPSDQQRIAKETLAFYIPWGNSHKAAPQWLAEMQRICEGIIAKQLI
SIO_010081: DK880_RS00780
subclass of: SO_0000673
so part of: DK880_RS00780
location: complement(185511..185885)
location: region:185511-185885:-1
so has part: feature:185511-185885:-1:exon

WP_162534063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185511-185885:-1:exon

DK880_RS05505
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05505
pseudo: true
so part of: sequence
location: complement(186391..187455)
location: region:186391-187455:-1
so has part: feature:186391-187455:-1:exon
subclass of: SO_0000010

position:186391:-1
position: 186391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187455:-1
position: 187455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186391-187455:-1:exon

DK880_RS05505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05505
inference: COORDINATES: protein motif:HMM:NF033559.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS1634 family transposase
SIO_010081: DK880_RS05505
subclass of: SO_0000673
so part of: DK880_RS05505
location: complement(186391..187455)
location: region:186391-187455:-1
so has part: feature:186391-187455:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186391-187455:-1:exon

DK880_RS00800
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00800
pseudo: true
so part of: sequence
location: <187464..187628
location: region:187464-187628:1
so has part: feature:187464-187628:1:exon
subclass of: SO_0000010

position:187464:1
position: 187464
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:187628:1
position: 187628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187464-187628:1:exon

DK880_RS00800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_034576516.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: DK880_RS00800
subclass of: SO_0000673
so part of: DK880_RS00800
location: <187464..187628
location: region:187464-187628:1
so has part: feature:187464-187628:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:187464-187628:1:exon

DK880_RS00805
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00805
old locus tag: DK880_00165
so part of: sequence
location: complement(187983..189710)
location: region:187983-189710:-1
so has part: feature:187983-189710:-1:exon
subclass of: SO_0000010

position:187983:-1
position: 187983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189710:-1
position: 189710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187983-189710:-1:exon

DK880_RS00805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00805
old locus tag: DK880_00165
inference: COORDINATES: protein motif:HMM:NF012869.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MILFRYILRTLYPFKRYLVALLVVLLIYSTNVFFKTQVIKNLVDYVANASATKDSIGRLIGHFMAALFIELLAFRLQEWCTLRYEPALQNHITTLTFQHTLKHSYRFFQSHFSGSLVANINNMATAIPTMVRIFLYDYVTNFLLILVSLITLWRVSSWCALLVVVWFLLTLFTSMLTTKYALNLANHTAKEEGKLLGYIGDIFSNIIVTRLFSAQPFTLKHLGRLQAAYCQSSQKYGWFTLKFYLFQSIGFQCYQSISILFLIYMHRKNLVTAGDFAMTLSMNLIVTEGLWKLFERMQEFNTLWGKVSQSVHVLLKEPEIQDRSGAIPLIVKSGSISFKEVTFSHSKTTKLFDKETIHIGAKQKVGLAGYSGSGKTTFFKLITRLFDVEQGAILIDGQNISSITQKSLYKAISVVPQECNLFHTTILENIRYGNPHASDSEVTEAAKRACAHEFIEELPYQYKTMVGEGGLNLSGGQRQRIAIARAILKDAPIVLLDEVTANLDVQTENRIYTSLKSLIEDKTALIITHHLDLLKDMDRILVFNKGKIVEDGMHKQLVAKRGLYNALWEMGERKS
SIO_010081: DK880_RS00805
subclass of: SO_0000673
so part of: DK880_RS00805
location: complement(187983..189710)
location: region:187983-189710:-1
so has part: feature:187983-189710:-1:exon

WP_109996954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:187983-189710:-1:exon

DK880_RS00815
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00815
pseudo: true
so part of: sequence
location: <190275..>190472
location: region:190275-190472:1
so has part: feature:190275-190472:1:exon
subclass of: SO_0000010

position:190275:1
position: 190275
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:190472:1
position: 190472
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190275-190472:1:exon

DK880_RS00815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00815
inference: COORDINATES: similar to AA sequence:RefSeq:WP_034576256.1
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: DK880_RS00815
subclass of: SO_0000673
so part of: DK880_RS00815
location: <190275..>190472
location: region:190275-190472:1
so has part: feature:190275-190472:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:190275-190472:1:exon

DK880_RS00820
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00820
old locus tag: DK880_00167
so part of: sequence
location: complement(190926..191324)
location: region:190926-191324:-1
so has part: feature:190926-191324:-1:exon
subclass of: SO_0000010

position:190926:-1
position: 190926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191324:-1
position: 191324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190926-191324:-1:exon

DK880_RS00820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00820
old locus tag: DK880_00167
inference: COORDINATES: protein motif:HMM:NF033559.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1634 family transposase
translation: MDVTLVEDILTIDQAKLSKGRFILATNQLDKEELPDQELLSTYKEQSVTESGFKFIKDHTFEVDSIFLKKPTRISTLMMVMTLCLMVYSIAQYYLRKELVSSNETILSQSGYATNRPSMQWVYRLFHGIHVI
SIO_010081: DK880_RS00820
subclass of: SO_0000673
so part of: DK880_RS00820
location: complement(190926..191324)
location: region:190926-191324:-1
so has part: feature:190926-191324:-1:exon

WP_262494598.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:190926-191324:-1:exon

DK880_RS00825
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00825
old locus tag: DK880_00168
so part of: sequence
location: complement(191454..191894)
location: region:191454-191894:-1
so has part: feature:191454-191894:-1:exon
subclass of: SO_0000010

position:191454:-1
position: 191454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191894:-1
position: 191894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191454-191894:-1:exon

DK880_RS00825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00825
old locus tag: DK880_00168
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEAHSGNASDQTTLEAAAKRMQNFCKQLASAPSFLYVGDLAMYAYCVKYRNDLIWLSRVSNRISQAKTLLLQPEISWVDLDHGYKMYALHQVYKGVSQRWVLIYAQQAYDKEIATLAKNIAQEATATRKMLWHLGNHLFGCPPRYR
SIO_010081: DK880_RS00825
subclass of: SO_0000673
so part of: DK880_RS00825
location: complement(191454..191894)
location: region:191454-191894:-1
so has part: feature:191454-191894:-1:exon

WP_109996956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191454-191894:-1:exon

DK880_RS00830
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00830
pseudo: true
so part of: sequence
location: <192000..192164
location: region:192000-192164:1
so has part: feature:192000-192164:1:exon
subclass of: SO_0000010

position:192000:1
position: 192000
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:192164:1
position: 192164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192000-192164:1:exon

DK880_RS00830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_034576516.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: DK880_RS00830
subclass of: SO_0000673
so part of: DK880_RS00830
location: <192000..192164
location: region:192000-192164:1
so has part: feature:192000-192164:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:192000-192164:1:exon

DK880_RS05080
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05080
old locus tag: DK880_00170
so part of: sequence
location: complement(192476..192547)
location: region:192476-192547:-1
so has part: feature:192476-192547:-1:exon
subclass of: SO_0000663

position:192476:-1
position: 192476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192547:-1
position: 192547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192476-192547:-1:exon

DK880_RS05080
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 247481
locus tag: DK880_RS05080
old locus tag: DK880_00170
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(192512..192514),aa:Thr,seq:tgt)
SIO_010081: DK880_RS05080
subclass of: SO_0000673
so part of: DK880_RS05080
location: complement(192476..192547)
location: region:192476-192547:-1
so has part: feature:192476-192547:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:192476-192547:-1:exon

DK880_RS00840
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00840
old locus tag: DK880_00172
so part of: sequence
location: complement(192899..196375)
location: region:192899-196375:-1
so has part: feature:192899-196375:-1:exon
subclass of: SO_0000010

position:192899:-1
position: 192899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196375:-1
position: 196375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192899-196375:-1:exon

DK880_RS00840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00840
old locus tag: DK880_00172
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:solute symporter family protein
translation: MVRHIDFMIIGLSLIGTLFIGIYYGRGIKTFQEYAVGNRKMSTSVIAISLIATVYGGRILYEGLDDCYRQGFERFMRSSVVMAAILYLFCRLIMPRMKAFIGHLSIAESMGSLYGPAARIITALLGIVLSIALLTVQIKVFLEIITFLFPKVVPFQTYSTILLILLVIAYATFGGARAVAITDVYQFLLFGLCFPLLIFVLLFSTEDLAAGWQKLTAVPQYNLNKMCTGHTLTTLLTYFIFRHLLMLVPPYIQRFYMAASVGQATKVFSKMAIVPCVIYLLIFSVAAALHIRGDNIPSNQNVLHYILSLTYFPGMTGLLVTAMLALLMSTADSTLHVASVLFTHDLWPFVAKFTKPHNCSLRMVRIASMGIGMISLLLVFHTGSTLQLMHKVIYLYDPAVAVPFILACLGFRPRPLAVLLVMGLNILIATYLILYQKQAVSPNRVILSMVVSALSLFALHYLLPKRPRTGWVGIPDSSAWDLQNQITKRWWLERVQRLKILFTRSYRVSVFPTQERTFVAVGSYTIINSIIALCFIQRQYFLPYVYLYMAVMALGTILALYPALHAYQKGGTPLLHDLWPMLLFLLLFMAPLQFAKLGHYSPMVCALWVGSIGLGIVLLSLETGSILLAVALGIHQTIPPYTPCLTLAGWGLSIELVLAVMLVTAAVVGFVQYKYLRDKATAKLKIIELTRTYEQRISLEAIYSQAHWARLDAPAGGTLLRAMGDTLQETADTLYKQDSSGIRSEITRFNKKLQKFSDCLAWRAQEERNLKLNKKSIQPIPLEPTILKVNQQILDLGEPLALLLRKQTPIAEIIVDPALLACLLLLNLWAISKSQPATDHIVTLTLAATTLQYGLAAETEADLPSLTLPALAFCFSTDTSLPNLKPSYRITEWNANTALPASEAQFYQLESKQIVEAHGGYVEIIESPTKVSCLYVFPLDGRKVMRFKTYNPTDLVANTIAETVESLTQEQELIGLLTAQTTLKEELIQQTIAFIKKAHGLVRRKSGAPYYTHPMAVAKLLLEVTQDPDTILAGLLHDIVEDTPVTLPQLELMYGAKVAAIVDQVTHYNTNGYPWELDKVENKNILHQCRDTRVVQVKLADRLHNMRTLSVRKPSDQQRIAKETLAFYIPWGKNHKAPQQWLAEMQRICEGIIAKQLT
SIO_010081: DK880_RS00840
subclass of: SO_0000673
so part of: DK880_RS00840
location: complement(192899..196375)
location: region:192899-196375:-1
so has part: feature:192899-196375:-1:exon

WP_109996958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192899-196375:-1:exon

DK880_RS00845
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00845
old locus tag: DK880_00173
so part of: sequence
location: complement(196606..200088)
location: region:196606-200088:-1
so has part: feature:196606-200088:-1:exon
subclass of: SO_0000010

position:196606:-1
position: 196606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200088:-1
position: 200088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196606-200088:-1:exon

DK880_RS00845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00845
old locus tag: DK880_00173
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:solute symporter family protein
translation: MVRHIDFMIIGLSLIGTLFIGIYYGRGIKTFQEYAVGNRKMSTSVIAISLIATIYGGSHLGVILDQNYRQGFEILIAHSILIVPMLYLFSRVTIPRMKEFEKHFSIAESMGSLYGSAARIITALLSILLAIAYLTTQIKVGFEMMSILFPKIISLQTYSTILLTLLVIAYASFGGARAVAITDVYQFLLFGLCFPLLIFVLLFSTEDLATGWQKLTALPQFNPNKMCTAHTLTSLLPGFIFRLLVMVIPAYIQRFYMASSVGQAAKVFNKITIAPCVIALLIFSVAAALHIHGDSIPSNQNVFHYILSLSYFPGMLGILVTAMLALLMSTADSHLHIASVLFTNDLWPFIARSTKLHNNCSLRMVRIASMGIGIISLLLVFHTSSIIQLMHKTYYFYWPTVSVPFIIACLGFRPRSLAVRIVMGLNIIVATYFIFYQKQAVTHNQIILSMIISAGSLFALHYLLPKCPHTGWVGIPDSSAWDLQNQITKRWWSTRMRRLKMLFTSSYRVSIFPTQERTFVAVGSYTIINAIIALCFIQRQYFLPYVYLYMAVMALGTILALYPALHTYQKGGTPLLHNLWPMLLFLLLFITPLQFAKLGHYSPMVCALLIASISLSIVLLSVEGSSMLLLCVLVIHKFLPPYINFVDLFWGSLKKASVIELMLTTALVSITLVGFLLYKYLRDKATAKLKIIELTRTYEQRISLEAIYSQAHWARLDATAGGTLLRAMGDTLQETADTLYKQDPSGIRSEITRFNKKLQKFSDCLAWRAQEERNLKLNKKSIQPIPLEPTILKVNQQILDLGEPLALLLRKQTPIAEIIVDPALLACLLLLNLWAISKSQPATDHIVTLTLAATTLQYGLATETEADLPSLILPALAFCFSTDTSLPNLKPSYRITEWNANTALPASEAQFYQLESKQIVEAHGGYVEIIESPTKVSCLYVFPLDGRKVMRFKTYDPADLVANALAETAESLAQEQELIALLTAQTTLKEELIEQTIAFIKKAHGLVRRKSGAPYYTHPMAVAKLLLEVTQDPDTILAGLLHDIVEDTPVTLPQLELMYGAKVAAIVDQVTHYNTNGYPWELDKVENKNILHQCRDTRVVQVKLADRLHNMRTLSVRKPSDQQRIAKETLAFYIPWGKNHKAPPQWLAEMQRICEEVLSS
SIO_010081: DK880_RS00845
subclass of: SO_0000673
so part of: DK880_RS00845
location: complement(196606..200088)
location: region:196606-200088:-1
so has part: feature:196606-200088:-1:exon

WP_109996959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196606-200088:-1:exon

DK880_RS00850
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00850
old locus tag: DK880_00174
so part of: sequence
location: complement(200319..203792)
location: region:200319-203792:-1
so has part: feature:200319-203792:-1:exon
subclass of: SO_0000010

position:200319:-1
position: 200319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203792:-1
position: 203792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200319-203792:-1:exon

DK880_RS00850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00850
old locus tag: DK880_00174
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:solute symporter family protein
translation: MLGHIDVMIIGLSLIGTLVIGIYYGRGVQTFQDYAVGNRKTATSVIAISFIATVYGGRTLLAGLDDSYRLGFERLNRQSVVIVAMIYFFSRFIIPRMKRFVGHLSIAESMGSVYGSAARIITALLGITLAIANLTIQIKVGFEIIAILFPKIIPFQTYSTILLSLLVIAYATFGGARAVAITDVYQFLLFGLCFPLLIFVLLFSTEDLAAGWQKLTAVPQYNLNKMCTGHTLTILLSDFMFRHIFMLMPHYIQRFYMAASVGQAVRVFNKIAIIPCVIALLIFSVTAALHIHGDSIPPNQNVLHYILSLAYFPGMTGLLVTAMLALLMSTADSSLHIASVLFTNDLWPFVAGVTKSHNYSLKIVRIASICIGMISLLMVFCTNDILQLIYKARQLYDPAVSIPFIIACWGFRPRPLVVLIVMGLNIAAYLIFYQKQVVSHDHIFIPIIVSAGSLFALHYLLPKCPHTGWVGIPDSSAWDLQNQITKRWWLERVQRLKTLFTRSYRVSVFPTQERTFIAVGGYTILHAIIALCFIQRQYFLPYVYLYMAVMALGTILALYPALHAYRKGGIPLLHDLWPMLLFLLLFIAPLQFAKLGHYSPMVCALLIASISLSIVLLSVECSSILLLCALVIHKFLPPYVNFVDLFWESLKHASVIELVLAFVFITAAIIGFGIYKYLRDKATAKLKIIELTRTYEQRISLEAIYSQAHWARLDATAGGALLRAMGDTLQETADTLYKQDPSGIRSEIASFNKKLQKFSDCLAWRAQEERSLKLNKKLIQPIPLEPTILKVNQQILDLGEPLALLLRKQTDVAEIIVDPALLECLLLLNLWAISKGQPATDHIVTLTLTATTLQYSLAAETAADLPSLILPALAFCFSTDTSLPNLKPSYRITEWNANTALPASEAQFYQLESKQIVEAHGGYVEIIESPTKVSCLYVFPLDGRKVMRFKTYDPADLVANALAETAESLAQEQELIALLTAQTTLKEELIQETIAFIKKAHGLVRRKSGAPYYTHPMAVAKLLLEATQDPATILAGLLHDIVEDTPVTLPQLELMYGAKVAAIVDQVTHYNTNGYPWEWDDPTAQSILDACSDIRVVQVKLADRLHNMRTLSVRKPADQQRIAKETLAFYIPWGKNHKAPPQWLAEMQRICEEVLSS
SIO_010081: DK880_RS00850
subclass of: SO_0000673
so part of: DK880_RS00850
location: complement(200319..203792)
location: region:200319-203792:-1
so has part: feature:200319-203792:-1:exon

WP_109996960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200319-203792:-1:exon

DK880_RS00855
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00855
old locus tag: DK880_00175
so part of: sequence
location: complement(204028..207504)
location: region:204028-207504:-1
so has part: feature:204028-207504:-1:exon
subclass of: SO_0000010

position:204028:-1
position: 204028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207504:-1
position: 207504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204028-207504:-1:exon

DK880_RS00855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00855
old locus tag: DK880_00175
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:solute symporter family protein
translation: MVRHIDLMIIGLFLIGTLVIGIYYGRSIKTFQDYAIGNRKMATSIIAISLIATVYGGETLQLRLDQSYRQGLKTYCIFFSVASIMYFFSRFITPRMKEFMGHLSIAESMGSLYGSAVRIITALLGIILAIAYLTTQIKVGLEITAILFPKVVQLQTYSTILLILLVIMYATFGGARAVAITDVYQFLLFGLCFPLLIFVLLFSTEDLAAGWQKFIAVPQFNLSKMCTRYTLSALLPGFIFRLLGPVMTPYIQRFYMASSVGQATKVFNKMAIAPCVIVSLIFCVTAALYIHGINIPPNQNVLHYILSLAYFPGMLGLLVTAMLALLMSTADSSLHVASVLFTNDLWPFIVGFPKSDKQSLKIVRIVSICIGIISLLMVLHTTSILQLLYKSFYFYWPAVSVPFMLACLGFRPRSLAVLAAMCLSILIAVYIIFYQKQALSHNHIVLSMIVNAGSLFALHYLLPKCPHTGWVGIPDSSAWDLQNQITKRWWLERVQRLKTLFTSSYRVSVFPTQERTFVAVGSYTIINAIIALCFIQRQYFLPYVYLYMAVMALGTILALYPALHTYQKGGTPLLHNLWPMLLFLLLFIAPLQFAKLGHYSPMVCALLIASISLSIVLLSVECSSILLLCALVIHKFLPPYVNFVDLFWESLKHASVIELVLAFVFITAAIIGFGIYKYLRDKATAKLKIIELTRTYEQRISLEAIYSQAHWARLDATAGGALLRAMGDTLQETADTLYKQDPSGIRSEIASFNKKLQKFSDCLAWRAQEERSLKLNKKLIQPIPLEPTILKVNQQILDLGEPLALLLRKQTDVAEIIVDPALLECLLLLNLWAISKGQPATDHIVTLTLTATTLQYSLAAETAADLPSLILPALAFCFSTDTSLPNLKPSYRITEWNANTALPASEAQFYQLESKQIVEAHGGYVEIIESPTKVSCLYVFPLDGRKVMRFKTYNPTDLVANTIAETVESLTQEQELIGLLTAQTTLKEELIQQTIAFIKKAHGLVRRKSGAPYYTHPMAVAKLLLEATQDPATILAGLLHDIVEDTPVTLHQLELMYGAKVAAIVDQVTHYNTNGYPWEWDDPTAQSILDACSDIRVVQVKLADRLHNMRTLSARKPADQQRIAKETLAFYIPWGTKHHVPQQWLAEIQRICEEVLSS
SIO_010081: DK880_RS00855
subclass of: SO_0000673
so part of: DK880_RS00855
location: complement(204028..207504)
location: region:204028-207504:-1
so has part: feature:204028-207504:-1:exon

WP_109996961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204028-207504:-1:exon

DK880_RS00860
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00860
old locus tag: DK880_00176
so part of: sequence
location: complement(207692..211162)
location: region:207692-211162:-1
so has part: feature:207692-211162:-1:exon
subclass of: SO_0000010

position:207692:-1
position: 207692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211162:-1
position: 211162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207692-211162:-1:exon

DK880_RS00860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00860
old locus tag: DK880_00176
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:solute symporter family protein
translation: MARHIDFMIIGLSLIGTLFIGIYYGRGVKTFQDYAVGKRKMATSVIAISFIATMYGGRTLLAGLDDSYRLGFERLMRLSIIVVAMIYFFSRFIIPRMKGFMGHLSIAESMGSVYGSAARIITALLGITLAIANLTIQIKVGLEIIAILFPKIIPFQTYSTILLSLLVIAYATFGGARAVAITDVYQFLLFGLCFPLLIFVLLFSTKDLAAGWQKFTALPQFNPNKMCTGHTLTILLSDFMFRHVFIVMPDYIQRFYMAASIGQATKVFNKIAIMPCVIALVIFCVTAALHIHGDSIPSNQNVFHYILSFAYFPGMLGILVTAMIALLMSTADSSLHIASVLFTNDLWPFVAGVTKSHNYSLKIVRIASICIGMISLLMVFCTNDILQLIYKARQLYDPAVSIPFIIACWGFRPRPLVVLIVMGLNIAAYLIFYQKQVVSHDHIFIPIIVSAGSLFALHYLLPKRPHTGWVGIPDSSAWDLQNQITKRWWLERVQRLKTLFTSSYRVSVFPTQERTFVAVGSYTILNSIIALCFIQRQYFLPYVYLYMAVMALGTILALYPALHAYRKGGIPLLHDLWPMLLFLLLFIAPLQFAKLGHYSPMVCALLIASISLSIVLLSVECSSMLLLCALLIHRFLLPIRFMDLFWESFRHASVIELVLATAVVASTLVGFVLYKYLRDKATAKLKIIELTRTYEQRISLEAIYSQAHWARLDATAGGTLLREMGVNLQETLCPIARNDPHKVENEITLFNKKLQKFSDCLAWRAQEERSLKLNKKLIQPIPLESTILKVNQQILDLGEPLALLLRKQTDVAEIVVDPALLECLLLLNLWAISKGQPATDHIVTLTLAATTLQYGLAAETTADLPSLILPALAFCFSTDTSLPNLKPSYRITAMNANITLPASEAQFYQLESKQIVEAHGGYVEIIESPTQVSCLYVFPLDGRKVMRFKTYDPVDLVANKISETAESLAQEQELIGLLTAQTTLKEELIQQTIAFIKKAHGLVRRKSGSPYYTHPMAVAKLLLEVTQDPDIILAGLLHDIVEDTPVTLPQLELMYGSEVAAVVDQVTHYNTNGYPWELDKVANKNILHQCRDIRVVQVKLADRLHNMRTLSVRKPADQQRIAKETLAFYIPWGKSHQAPPQWLAEMQRICEEIIAK
SIO_010081: DK880_RS00860
subclass of: SO_0000673
so part of: DK880_RS00860
location: complement(207692..211162)
location: region:207692-211162:-1
so has part: feature:207692-211162:-1:exon

WP_109996962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207692-211162:-1:exon

DK880_RS00865
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00865
old locus tag: DK880_00177
so part of: sequence
location: 211294..211572
location: region:211294-211572:1
so has part: feature:211294-211572:1:exon
subclass of: SO_0000010

position:211294:1
position: 211294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211572:1
position: 211572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211294-211572:1:exon

DK880_RS00865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00865
old locus tag: DK880_00177
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFTAWMQTKEVTKRKNFLKNGKKWEEISDSHYETIKALRIGRDSIADNWIREKYQESDKTISEEAFIKEQEGRCVAALAEKSEHFRRRAFRI
SIO_010081: DK880_RS00865
subclass of: SO_0000673
so part of: DK880_RS00865
location: 211294..211572
location: region:211294-211572:1
so has part: feature:211294-211572:1:exon

WP_109996963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211294-211572:1:exon

DK880_RS00870
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00870
old locus tag: DK880_00178
so part of: sequence
location: complement(211661..211840)
location: region:211661-211840:-1
so has part: feature:211661-211840:-1:exon
subclass of: SO_0000010

position:211661:-1
position: 211661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211840:-1
position: 211840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211661-211840:-1:exon

DK880_RS00870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00870
old locus tag: DK880_00178
inference: COORDINATES: protein motif:HMM:NF014165.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGNFLVMRDWLREQIYRFGRVYNVAQIIQHVTGNAIAVQAYKAYIDKKYTNLAALKDKL
SIO_010081: DK880_RS00870
subclass of: SO_0000673
so part of: DK880_RS00870
location: complement(211661..211840)
location: region:211661-211840:-1
so has part: feature:211661-211840:-1:exon

WP_109996964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211661-211840:-1:exon

DK880_RS00875
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00875
old locus tag: DK880_00179
so part of: sequence
location: complement(211815..212342)
location: region:211815-212342:-1
so has part: feature:211815-212342:-1:exon
subclass of: SO_0000010

position:211815:-1
position: 211815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212342:-1
position: 212342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211815-212342:-1:exon

DK880_RS00875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00875
old locus tag: DK880_00179
inference: COORDINATES: protein motif:HMM:NF015562.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015556 - C4-dicarboxylate transmembrane transporter activity [Evidence IEA]
GO process: GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anaerobic C4-dicarboxylate transporter family protein
translation: MSDKEGLKRYVEKYYDQIEHIVNLAGQSGVRYSTVNPFIYIKSNILGQVSLLDMANSAGVQGMFSLLGTAWLSSTFVACNKEVLLQFIKQYLSVPWQFSIMLLLMSALMGSSAATIKALFPLGLALGISPKILLASVAAVNGIFIIPIYPTILAAINLDTTGSTRNSYGKFSCYA
SIO_010081: DK880_RS00875
subclass of: SO_0000673
so part of: DK880_RS00875
location: complement(211815..212342)
location: region:211815-212342:-1
so has part: feature:211815-212342:-1:exon

WP_109996965.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211815-212342:-1:exon

DK880_RS00880
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00880
old locus tag: DK880_00180
so part of: sequence
location: complement(212548..213690)
location: region:212548-213690:-1
so has part: feature:212548-213690:-1:exon
subclass of: SO_0000010

position:212548:-1
position: 212548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213690:-1
position: 213690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212548-213690:-1:exon

DK880_RS00880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00880
old locus tag: DK880_00180
inference: COORDINATES: protein motif:HMM:NF012235.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MHKKVLTFSHKKWKAFSKVESDIAGYIVNSIENFISLSIYTDEKDRQELIKNILSDNVDKHKFAQLSTIHAYCLQEIMTFLLGTASLVFCCVSYTIYNMKIEKIVMVISIFMILKEKLHSLSIRIKDAIKSFGILSQALNDLYENRSLSVERRKKTFNDQNIAIELKNLSFSFTNNTFLTCINLKIEPQEKIALIGPSGSGKSTIANLVLGFYKPTSGEVLVNFEPIQDFNQLSWCRHIAYVPQNPILLNNSIYKNIRLGNLHATYQEVIEAAKKARCHDFISSLTDGYMTYAGSSGLKLSGGQRQKICIARAILKNAPFMLFDEPTSGVDYHEESQLIPILFEHLRDKTILYITHRSTKLVSFDRIIKIYKGSLTVEYE
SIO_010081: DK880_RS00880
subclass of: SO_0000673
so part of: DK880_RS00880
location: complement(212548..213690)
location: region:212548-213690:-1
so has part: feature:212548-213690:-1:exon

WP_162534068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212548-213690:-1:exon

DK880_RS00885
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00885
old locus tag: DK880_00181
so part of: sequence
location: complement(213732..214121)
location: region:213732-214121:-1
so has part: feature:213732-214121:-1:exon
subclass of: SO_0000010

position:213732:-1
position: 213732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214121:-1
position: 214121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213732-214121:-1:exon

DK880_RS00885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00885
old locus tag: DK880_00181
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MLGRSLGMLWPYFLNKIIDEGSGCHDNLFFWMVAFLGCFLAGEVILRIAAYIFIIPISDTRSYVKSYFYSFVMNRSFSFITMRSPVEIFNKLNQISTSIDTLLDMIFWIFLSIAVNLCVASVMFITLSK
SIO_010081: DK880_RS00885
subclass of: SO_0000673
so part of: DK880_RS00885
location: complement(213732..214121)
location: region:213732-214121:-1
so has part: feature:213732-214121:-1:exon

WP_109996967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213732-214121:-1:exon

DK880_RS00890
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00890
old locus tag: DK880_00182
so part of: sequence
location: complement(214288..214704)
location: region:214288-214704:-1
so has part: feature:214288-214704:-1:exon
subclass of: SO_0000010

position:214288:-1
position: 214288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214704:-1
position: 214704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214288-214704:-1:exon

DK880_RS00890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00890
old locus tag: DK880_00182
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGSEPGPSTNRTYTNTCDFEESAENRSALQKEVERSIIDLIQGGYSCNDPEAGGIIVERLRNDSAVVTTILERLYTKRRAVGRTPSKEEIREVMSASILEYMARVEKEILDQRANGSARARAANPKSIQEVYQDRINY
SIO_010081: DK880_RS00890
subclass of: SO_0000673
so part of: DK880_RS00890
location: complement(214288..214704)
location: region:214288-214704:-1
so has part: feature:214288-214704:-1:exon

WP_204082273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214288-214704:-1:exon

DK880_RS00895
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00895
old locus tag: DK880_00183
so part of: sequence
location: complement(214769..215062)
location: region:214769-215062:-1
so has part: feature:214769-215062:-1:exon
subclass of: SO_0000010

position:214769:-1
position: 214769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215062:-1
position: 215062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214769-215062:-1:exon

DK880_RS00895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00895
old locus tag: DK880_00183
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPTLSIALYMVSAFFVGVAYSALTTISRSVFYTAQHTATYNQSILMVNLMESIGQIFIMLATANLIHNTVLTVLLTALFFILSFWMTRHNILYLSIK
SIO_010081: DK880_RS00895
subclass of: SO_0000673
so part of: DK880_RS00895
location: complement(214769..215062)
location: region:214769-215062:-1
so has part: feature:214769-215062:-1:exon

WP_162534070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214769-215062:-1:exon

DK880_RS00905
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00905
old locus tag: DK880_00185
so part of: sequence
location: 215686..216702
location: region:215686-216702:1
so has part: feature:215686-216702:1:exon
subclass of: SO_0000010

position:215686:1
position: 215686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216702:1
position: 216702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215686-216702:1:exon

DK880_RS00905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00905
old locus tag: DK880_00185
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSYLKSSDILQIERIFKKECQKFQYNWQGEYDLICNDGVLFRNSTISGFLPDIIKNRTLIPTALSQTCLRERVAPDYLHVFNMLGVVAMESELFNILLLTLNFFRSLGYTSDRLIIYGPAGNSLWMDLINSQANLRYIELLHNKQKYWVEWNFKNISIKGVRITIALDQVNRVVPVGNIIILSNAQSRKYIDAGFGIECIEAYPYGGVIEQIPRFSQLLSLVGAKQGFDFLRQLFAADLLITRGLLPGAKGHRHVLRCFLRKLIKNRPNFSVILPKMEKVLAADFSKLHKYLTEEAFALRTNKKSTSLAFKFYTRNPQMYNDAHLWSTFGLKNLNEKF
SIO_010081: DK880_RS00905
subclass of: SO_0000673
so part of: DK880_RS00905
location: 215686..216702
location: region:215686-216702:1
so has part: feature:215686-216702:1:exon

WP_109996971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215686-216702:1:exon

DK880_RS00910
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00910
old locus tag: DK880_00186
so part of: sequence
location: 216715..217497
location: region:216715-217497:1
so has part: feature:216715-217497:1:exon
subclass of: SO_0000010

position:216715:1
position: 216715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217497:1
position: 217497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216715-217497:1:exon

DK880_RS00910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00910
old locus tag: DK880_00186
inference: COORDINATES: protein motif:HMM:NF017026.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MASRWCQIRPDLYDLFYSPKHHNNGDIKYYVGLVDTEKSSKKILEIGSGTGRITIPLLKGGHTITAVEISQESCNWLTLKVQENHLKKDKLLLISNDIMNVELEDEFDFILLPFRVFQHFYEEDEQIVLLKKLYNLLPLNGKLILDVFYPEWKILTQNIGEAVLFSEDKRGNEIIKRYFFKEEVNLLSQYFRGYWKYELYKTQNMAKTIIEPFKMGYYTYNQLSLLFRISGFKIIECLGSFAGSPLGKGNEIIIQAMKNI
SIO_010081: DK880_RS00910
subclass of: SO_0000673
so part of: DK880_RS00910
location: 216715..217497
location: region:216715-217497:1
so has part: feature:216715-217497:1:exon

WP_109996972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:216715-217497:1:exon

DK880_RS05585
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05585
old locus tag: DK880_00187
pseudo: true
so part of: sequence
location: <217679..217882
location: region:217679-217882:1
so has part: feature:217679-217882:1:exon
subclass of: SO_0000010

position:217679:1
position: 217679
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:217882:1
position: 217882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217679-217882:1:exon

DK880_RS05585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05585
old locus tag: DK880_00187
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016628377.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: HD domain-containing protein
SIO_010081: DK880_RS05585
subclass of: SO_0000673
so part of: DK880_RS05585
location: <217679..217882
location: region:217679-217882:1
so has part: feature:217679-217882:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:217679-217882:1:exon

DK880_RS00920
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00920
old locus tag: DK880_00189
so part of: sequence
location: complement(218151..218972)
location: region:218151-218972:-1
so has part: feature:218151-218972:-1:exon
subclass of: SO_0000010

position:218151:-1
position: 218151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218972:-1
position: 218972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218151-218972:-1:exon

DK880_RS00920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00920
old locus tag: DK880_00189
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKFLHPIYNYIISKANRDAHFRSLLQQISKEEVLDSSLRKTITQMLSGDLIKASQKHPKHIIFEAHRGPFDLKVIFQQMEKECQSYDVETPYDVSYIPYFLMILDHPCYYLYIGNATLLESQACPSFVEKYWAIFAMRQIGLSSTEQDMNNDTVQVYNLYSDLIRSACSAYRCCPKPTIPLYLMEDLLHARCPGYIFKYPFFILDYKSKELQDALDEFRSIPVLPCGLKEMAKKIQAGKLATPKEMAYMEGYRKFRATHFTLYETVLPCVSPQ
SIO_010081: DK880_RS00920
subclass of: SO_0000673
so part of: DK880_RS00920
location: complement(218151..218972)
location: region:218151-218972:-1
so has part: feature:218151-218972:-1:exon

WP_109996973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:218151-218972:-1:exon

DK880_RS00925
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00925
old locus tag: DK880_00190
so part of: sequence
location: 219330..219737
location: region:219330-219737:1
so has part: feature:219330-219737:1:exon
subclass of: SO_0000010

position:219330:1
position: 219330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219737:1
position: 219737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219330-219737:1:exon

DK880_RS00925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00925
old locus tag: DK880_00190
inference: COORDINATES: protein motif:HMM:NF024206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MLIQHKKIACSHLLVKLLLCFLFTQQAALHGHAGCITALIIGEAKVNKQNNYKETPLHLTARYNRKNCINVLIRHRAKVKLLDNKGQTPLHLAAQFGHLDCIIALTNARADIDALDDDNQTFFTSGCSLWTRRLC
SIO_010081: DK880_RS00925
subclass of: SO_0000673
so part of: DK880_RS00925
location: 219330..219737
location: region:219330-219737:1
so has part: feature:219330-219737:1:exon

WP_162534071.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219330-219737:1:exon

DK880_RS05085
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05085
so part of: sequence
location: complement(219948..220088)
location: region:219948-220088:-1
so has part: feature:219948-220088:-1:exon
subclass of: SO_0000010

position:219948:-1
position: 219948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220088:-1
position: 220088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219948-220088:-1:exon

DK880_RS05085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05085
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDPRKNWQDKLLYQAKTNALITRFWKNATRFHFEATVQMADPTCLL
SIO_010081: DK880_RS05085
subclass of: SO_0000673
so part of: DK880_RS05085
location: complement(219948..220088)
location: region:219948-220088:-1
so has part: feature:219948-220088:-1:exon

WP_162534072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219948-220088:-1:exon

DK880_RS05090
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05090
so part of: sequence
location: complement(220309..220470)
location: region:220309-220470:-1
so has part: feature:220309-220470:-1:exon
subclass of: SO_0000010

position:220309:-1
position: 220309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220470:-1
position: 220470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220309-220470:-1:exon

DK880_RS05090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05090
EC number: 4.1.1.49
inference: COORDINATES: protein motif:HMM:NF013461.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004612 - phosphoenolpyruvate carboxykinase (ATP) activity [Evidence IEA]
GO process: GO:0006094 - gluconeogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoenolpyruvate carboxykinase (ATP)
translation: MTEAQAAYYFLSGYTALVGSTEVGQKQLIQATFSSCFGAPFLIRPVENIPQFI
SIO_010081: DK880_RS05090
subclass of: SO_0000673
so part of: DK880_RS05090
location: complement(220309..220470)
location: region:220309-220470:-1
so has part: feature:220309-220470:-1:exon

WP_162534073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220309-220470:-1:exon

DK880_RS00935
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00935
so part of: sequence
location: 220481..220711
location: region:220481-220711:1
so has part: feature:220481-220711:1:exon
subclass of: SO_0000010

position:220481:1
position: 220481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220711:1
position: 220711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220481-220711:1:exon

DK880_RS00935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00935
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVKTTGKLTRLDNITLFEKLPPTKFYSIDQYYIDKADIGVAGAVDSSVNDRDLNLELYIALLIFTNRASVAKDICT
SIO_010081: DK880_RS00935
subclass of: SO_0000673
so part of: DK880_RS00935
location: 220481..220711
location: region:220481-220711:1
so has part: feature:220481-220711:1:exon

WP_109996975.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220481-220711:1:exon

DK880_RS00940
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: lpxB
locus tag: DK880_RS00940
old locus tag: DK880_00191
so part of: sequence
location: 220934..222058
location: region:220934-222058:1
so has part: feature:220934-222058:1:exon
subclass of: SO_0000010

position:220934:1
position: 220934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222058:1
position: 222058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220934-222058:1:exon

DK880_RS00940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: lpxB
locus tag: DK880_RS00940
old locus tag: DK880_00191
EC number: 2.4.1.182
inference: COORDINATES: protein motif:HMM:TIGR00215.1
GO function: GO:0008915 - lipid-A-disaccharide synthase activity [Evidence IEA]
GO process: GO:0009245 - lipid A biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipid-A-disaccharide synthase
translation: MRYCIIAGESSGDMYGADLIRQIKHIDKEADFWACGGEAMQKAMGKPCALYTTSIASMGLDFLQNCYKLWQWFMFCKKSLVAYQPDAILFIDFGGFNMRLAGFAKQNGWFIYYYIPPKIWAYRKPRIARIQNNIHQIYSILPFEVACYQAHGYSSITYVGHPLVEIVENHFINDSFIAANGLDQRPIIALLPGSRIGEIKRILPVMVTQAVYFNTYQFVVAGLSCMPRTLYEKIVPPTVRIVYDQTYDLLAMSKAAIVTSGTATLETALWNVPQIVVYKTSWLTYAVYKRILTLSHISLVNLLVNQAAVPELIQDALTENQLSKALTQLLIEEISAQQQSFYKQIRQLLGKKSAAVEVARLMVADRMKQPPYET
SIO_010081: DK880_RS00940
subclass of: SO_0000673
so part of: DK880_RS00940
location: 220934..222058
location: region:220934-222058:1
so has part: feature:220934-222058:1:exon

WP_109996976.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220934-222058:1:exon

DK880_RS00945
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00945
old locus tag: DK880_00192
so part of: sequence
location: 222521..222742
location: region:222521-222742:1
so has part: feature:222521-222742:1:exon
subclass of: SO_0000010

position:222521:1
position: 222521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222742:1
position: 222742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222521-222742:1:exon

DK880_RS00945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00945
old locus tag: DK880_00192
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNRQNMDKQTEDLPPVFYRDIFEKIAEHTDETTDRALWNTSKCMRSVIRDKLTKLYKEKFNKLRSLSGHYVQF
SIO_010081: DK880_RS00945
subclass of: SO_0000673
so part of: DK880_RS00945
location: 222521..222742
location: region:222521-222742:1
so has part: feature:222521-222742:1:exon

WP_109996977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:222521-222742:1:exon

DK880_RS00950
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00950
old locus tag: DK880_00193
so part of: sequence
location: 222859..223380
location: region:222859-223380:1
so has part: feature:222859-223380:1:exon
subclass of: SO_0000010

position:222859:1
position: 222859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223380:1
position: 223380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222859-223380:1:exon

DK880_RS00950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00950
old locus tag: DK880_00193
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRRSASYFDTKKSNTSEGFYHGFVLGMLSSFGITHYIRSNRESGLGRYGYPKIKLQYALKFFDDAYKDSLKINPCDAVRTSFGLIPDGTLLASPWAINNRGNPLDDVWMFGNLFKKPLESILAQEKAKVFLSRQNENFGQCKIHAFLASKKEKKIDETYAQTRNRSKKYAHCF
SIO_010081: DK880_RS00950
subclass of: SO_0000673
so part of: DK880_RS00950
location: 222859..223380
location: region:222859-223380:1
so has part: feature:222859-223380:1:exon

WP_162534074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:222859-223380:1:exon

DK880_RS05370
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05370
so part of: sequence
location: 223457..223669
location: region:223457-223669:1
so has part: feature:223457-223669:1:exon
subclass of: SO_0000010

position:223457:1
position: 223457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223669:1
position: 223669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223457-223669:1:exon

DK880_RS05370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05370
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGRFVKQSIANWGKYIYVKKNAVALLKDTIAKLDHAKKQRSILLSSVTDPYQPIEQRYQLTRGLLEVAFV
SIO_010081: DK880_RS05370
subclass of: SO_0000673
so part of: DK880_RS05370
location: 223457..223669
location: region:223457-223669:1
so has part: feature:223457-223669:1:exon

WP_204082275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:223457-223669:1:exon

DK880_RS00960
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00960
old locus tag: DK880_00195
so part of: sequence
location: complement(223897..224538)
location: region:223897-224538:-1
so has part: feature:223897-224538:-1:exon
subclass of: SO_0000010

position:223897:-1
position: 223897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224538:-1
position: 224538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223897-224538:-1:exon

DK880_RS00960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00960
old locus tag: DK880_00195
inference: COORDINATES: protein motif:HMM:NF024906.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKNTKGTYTRKVGYELLVEHYNKEFSQLQVLCRDKGADSFTVNDPMMRKAAVEALGNNQTIKEIDLSFSAIEHASIEALANVLEKNNTITKINLNNSFIGNRGAIALAEALKVNKSITNIDLANNCIGDEGAVALVETLQVNKLITNINLANNCIGDEGAVALAEAFKGRHKINIILESNYIGNIGKTALEKVFKGNPAMDIKLESYYYIIG
SIO_010081: DK880_RS00960
subclass of: SO_0000673
so part of: DK880_RS00960
location: complement(223897..224538)
location: region:223897-224538:-1
so has part: feature:223897-224538:-1:exon

WP_204082276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:223897-224538:-1:exon

DK880_RS00965
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00965
old locus tag: DK880_00196
so part of: sequence
location: 225005..226075
location: region:225005-226075:1
so has part: feature:225005-226075:1:exon
subclass of: SO_0000010

position:225005:1
position: 225005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226075:1
position: 226075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225005-226075:1:exon

DK880_RS00965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00965
old locus tag: DK880_00196
inference: COORDINATES: protein motif:HMM:NF041359.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntG family PLP-dependent aldolase
translation: MAIQAKTIDLRSDTVTLPTTAVVDAMGQATVGDFAYGEDQSYNALLAYCKKLFNVEDGLFVTSGTLANRLAIASQTMPGDEVITHYNYHIHFFDSAGNAKINGVVLNCIQNASGVIDIAAVEAAIHSKPRYKHFAQVKLVTIENSINGFNGKVYPFDLQVQLYQWLQAQGIALHIDGARIWNAHVATGIPLSDYAKHTDTISCSFTKGLGGPFGAMLLGSKQVIERAKKLQLWLGSGYHQIGYYAQAAKQVMQHQLTRLAQDHQLAKLFADGIQSIPYIQLIPPYPDTNIVGFSIKALGVSNAVFLETCQAYGLLLFPWLEAHIRAVIHLGIDRAAILSAVATIKQVVNYFIHACK
SIO_010081: DK880_RS00965
subclass of: SO_0000673
so part of: DK880_RS00965
location: 225005..226075
location: region:225005-226075:1
so has part: feature:225005-226075:1:exon

WP_109996981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225005-226075:1:exon

DK880_RS00970
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00970
old locus tag: DK880_00197
so part of: sequence
location: 226066..227106
location: region:226066-227106:1
so has part: feature:226066-227106:1:exon
subclass of: SO_0000010

position:226066:1
position: 226066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227106:1
position: 227106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226066-227106:1:exon

DK880_RS00970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00970
old locus tag: DK880_00197
inference: COORDINATES: protein motif:HMM:NF041359.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: threonine aldolase family protein
translation: MQIDFFSDTNTNPSKAMRQVMAHASVGNEAAGEDPTVNALIKVTCQLLGKPAALFLPSGTMCNVIAYKAHIQRPGDYILLDHKAHALVVQSGLIAGQAEATPLPIVGIRGVFTEDQIKEHIIRPPLRNIPAVRLVSIEQTTNFGGGAIWPLTVLQAIAALCKAYAVSMHLDGARLFNAAVATQVAVSAYAACFDSVFVDFSKGLGAPMGAVLAGEEDFIEKAWYYKFQLGGAMHQAGIIAAACLYGLEHHRDDLIEDHVKMKYLLEGLFPIHGIIVNPSLYQTNIGYFSLTPDTIPIQTLLDRLRHAYGIRMAAVADSIRVITHRDITYKAIDITLAAVKKILRVM
SIO_010081: DK880_RS00970
subclass of: SO_0000673
so part of: DK880_RS00970
location: 226066..227106
location: region:226066-227106:1
so has part: feature:226066-227106:1:exon

WP_109996982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:226066-227106:1:exon

DK880_RS00975
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00975
old locus tag: DK880_00199
so part of: sequence
location: complement(227525..228100)
location: region:227525-228100:-1
so has part: feature:227525-228100:-1:exon
subclass of: SO_0000010

position:227525:-1
position: 227525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228100:-1
position: 228100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227525-228100:-1:exon

DK880_RS00975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00975
old locus tag: DK880_00199
inference: COORDINATES: protein motif:HMM:NF012514.2
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NUDIX domain-containing protein
translation: MLCSTSKEDRIDVLDEQGIKTGEVLSRKEIHQLGKIHRTVHLYLFENESKKLLLQRRASNLDHYPGMFSISVTGHVDAGEDSMQAVKRELQEELRIDPLLVKIDFLSSIRQDVVVTPTYIDRQFNDVYIGWADFKMEDIRFNPIEVTEVKLVPFSEFKDMVFNKKENFTLYEKECEQLLLFLKNTLNNNLA
SIO_010081: DK880_RS00975
subclass of: SO_0000673
so part of: DK880_RS00975
location: complement(227525..228100)
location: region:227525-228100:-1
so has part: feature:227525-228100:-1:exon

WP_109996983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227525-228100:-1:exon

DK880_RS00980
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00980
old locus tag: DK880_00200
so part of: sequence
location: 228426..230048
location: region:228426-230048:1
so has part: feature:228426-230048:1:exon
subclass of: SO_0000010

position:228426:1
position: 228426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230048:1
position: 230048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228426-230048:1:exon

DK880_RS00980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00980
old locus tag: DK880_00200
inference: COORDINATES: protein motif:HMM:NF013702.2
GO function: GO:0016746 - acyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 1-acyl-sn-glycerol-3-phosphate acyltransferase
translation: MSNALFTPIEPNAAHWPISKLHQHQKAFLQEVVERTILSLRTRYATDTALYHMLTQTTAKELARIAADRWVCDPPDDQFFWEDIENALIHKVDATLLLNKIASRYVNEISSDFSVTHYKWVSKGVHTVFTSLLKPSCFKFKGKRWISKHKRLHEKLHITGALDSIHALAQIGTIVLVPTHTSNWDSVVIGLAMQQLGLSPLSWGAGLNLFNHKGFRHIFSKLGTYKIDRRKKNIPYLLAQKHYTRLTVEWHCPTLFYPAGTRSRSGTIESNLKLGLLGTPFEAQAHTFQQYGPTAHKIFMVPVVLNYHCVLEAPQLIQEWIHPETAKHVAKRDCCYSNLSVSKKILCKGSEIFLNIGTPLDVMGNKVDKAGRSYHAQGQEIDLYQQFLKLAGSTTSKQSGYYLKILSHTIVDSYSCHNLVVSSHLVAFVAYKIAQGKEDFSMHSTTTIKLVRASFMVALEKVYQALQLLYEQKKIDFTALVRKSHLPAIVADGLAKLGVYHAKTPLVAVKNGDFLIQDLPLLYYYHNRLTGYGLEQLFLA
SIO_010081: DK880_RS00980
subclass of: SO_0000673
so part of: DK880_RS00980
location: 228426..230048
location: region:228426-230048:1
so has part: feature:228426-230048:1:exon

WP_109996984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:228426-230048:1:exon

DK880_RS00985
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00985
old locus tag: DK880_00201
so part of: sequence
location: 230404..232164
location: region:230404-232164:1
so has part: feature:230404-232164:1:exon
subclass of: SO_0000010

position:230404:1
position: 230404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232164:1
position: 232164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230404-232164:1:exon

DK880_RS00985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS00985
old locus tag: DK880_00201
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIPINKGNNKSSYFTLLYTLLGIGCIAVATISCIKQPLTMKGCSTTKNQCDKGKEEGSKSTPDNCCNKNEILFSFPVVCINDIMLFPNSKFSTIIKLIMPDEQASLRDILEFITRTNLKSAGDFFLFRDRGSGGQQELEDPIRNMQEIINKCINNKIKNLVSKAMQHKEMTYGAYIWRFNKEKKQLHFDIAKELKKQGTRRISSEEEKSLPFANKCEECNLMNKMEPQLNHLISLLFQQEIIANRIAMNLCMDAKQAITDLDNTGIPCNIYRYEMPRNEWRELCSALTTQSVEKVTEQYVKFLEACMNPAVDRKIPNLTKILEEKNQAYNIDAVCKEIGDVFPTQLNITQTKNKNKTIKTKNPIAFKSKSLSTTLLPAIDQAEQSSNKPLFEQIELFEQINLSLLPNMNSLDKRVVKWSKNMNWLTKYYQKAEANSYDGQFKDKNKDLATLSEEKIKHDITPIHFLLACADVDHYFQRRDDKDNTRTAFIMIDNQLIKRFGMVDIALADNIIYHQAIRFPEIVEKTLHSPIDSTTEICKDTEEAYQYIEGRSIVKDLTTQAYIVRIKEKEERFSKDIHVFPFRIYR
SIO_010081: DK880_RS00985
subclass of: SO_0000673
so part of: DK880_RS00985
location: 230404..232164
location: region:230404-232164:1
so has part: feature:230404-232164:1:exon

WP_109996985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:230404-232164:1:exon

DK880_RS00990
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: map
locus tag: DK880_RS00990
old locus tag: DK880_00202
so part of: sequence
location: complement(232279..233058)
location: region:232279-233058:-1
so has part: feature:232279-233058:-1:exon
subclass of: SO_0000010

position:232279:-1
position: 232279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233058:-1
position: 233058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232279-233058:-1:exon

DK880_RS00990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: map
locus tag: DK880_RS00990
old locus tag: DK880_00202
EC number: 3.4.11.18
inference: COORDINATES: protein motif:HMM:TIGR00500.1
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I methionyl aminopeptidase
translation: MIAIRTASELKLLRWAGHIVALCHAALQQAIQPGISGLFLDEMVEEIIRSNQAKPAFKGYRGFPNATCISINNGVVHGIPTRRLLEEGDIVTVDIGVQYKGYIGDSAWTYGVGSIAEEQKFLLEHTEQALWQGLNVIKAGIHLTTISHTIGSYAKQHHLSVVKELSGHGVGTALHEPPIILNYGKPNEGPILKAGMVLAIEPICNLGGGAIKTLSDGWTIVTKDGKNSAHFEHTIAVEEVGYTVLTSLADAGSFPAMVN
SIO_010081: DK880_RS00990
subclass of: SO_0000673
so part of: DK880_RS00990
location: complement(232279..233058)
location: region:232279-233058:-1
so has part: feature:232279-233058:-1:exon

WP_109996986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232279-233058:-1:exon

DK880_RS00995
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS00995
old locus tag: DK880_00203
so part of: sequence
location: complement(233071..233144)
location: region:233071-233144:-1
so has part: feature:233071-233144:-1:exon
subclass of: SO_0000663

position:233071:-1
position: 233071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233144:-1
position: 233144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233071-233144:-1:exon

DK880_RS00995
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 247481
locus tag: DK880_RS00995
old locus tag: DK880_00203
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(233108..233110),aa:Ala,seq:tgc)
SIO_010081: DK880_RS00995
subclass of: SO_0000673
so part of: DK880_RS00995
location: complement(233071..233144)
location: region:233071-233144:-1
so has part: feature:233071-233144:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:233071-233144:-1:exon

DK880_RS01000
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: dnaN
locus tag: DK880_RS01000
old locus tag: DK880_00205
so part of: sequence
location: 233912..235024
location: region:233912-235024:1
so has part: feature:233912-235024:1:exon
subclass of: SO_0000010

position:233912:1
position: 233912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235024:1
position: 235024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233912-235024:1:exon

DK880_RS01000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: dnaN
locus tag: DK880_RS01000
old locus tag: DK880_00205
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934920.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit beta
translation: MEFTVSSALLSQQLTAISGVITRNPIVPILENFLFQIDHNRLVVTASDLQTFISVTLPIQSDTQASVAIPARILLDTVKNLPEQLIKLSINLSNYTISIQSEHGYYKLAGENANDFPQLATINDGIALDVDAAVYKNILQKTLFVTSSDELKPAMCGVHMELTDKQATFVATDGHRLVRYIRKDLSAATQKAIIMPKKALMLLHGLLSSKMKQMHIAFDPYKIQFDMDNISVITRLVDERYPDYENVIPTEHSRKLTIHRAALVSSLRRISIYANRATHQVKLTIQDNVLTLSAEDLDFSNEAKEELIGSYEGLPLEIGFNAKLLLDMLTNITAEEIEFLFWEVNKAVLIFPKVQEEHEHLLLLIMPIIF
SIO_010081: DK880_RS01000
subclass of: SO_0000673
so part of: DK880_RS01000
location: 233912..235024
location: region:233912-235024:1
so has part: feature:233912-235024:1:exon

WP_109996987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:233912-235024:1:exon

DK880_RS01005
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01005
old locus tag: DK880_00206
so part of: sequence
location: 235038..236042
location: region:235038-236042:1
so has part: feature:235038-236042:1:exon
subclass of: SO_0000010

position:235038:1
position: 235038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236042:1
position: 236042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235038-236042:1:exon

DK880_RS01005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01005
old locus tag: DK880_00206
inference: COORDINATES: protein motif:HMM:NF016915.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MCYFIRLLGFVACLGWFIPNYSHAKPMKHANKQLIVLLNGLCDKVSTFDTVKQKLEKAFPSASIIALTSTEGMLSVMLSIKEQAKAAFQELTDKVNDIQSKSIVLIGHSQGGLRAYALLKQYETLLNIKGLITLATPWEGAHGTKVDGSMLKQHLTKAVLNDLRMLALNLGYPSDMLINQLNITIQKNQELLFLPGAKDLKMDSLFLDEIKKTLLHEKVPIWAIGGIQNDFGALLPRKIKHRFIALNSMYTFFIVGQDALNTAYHDMKIPLASQHARNFVPQSKKNFKRIKIRNVFHSTHVWPKLNVPVGKYMLSHPDALRKIITCAKEAFSQK
SIO_010081: DK880_RS01005
subclass of: SO_0000673
so part of: DK880_RS01005
location: 235038..236042
location: region:235038-236042:1
so has part: feature:235038-236042:1:exon

WP_109996988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:235038-236042:1:exon

DK880_RS01010
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01010
old locus tag: DK880_00207
so part of: sequence
location: 236073..236164
location: region:236073-236164:1
so has part: feature:236073-236164:1:exon
subclass of: SO_0000663

position:236073:1
position: 236073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236164:1
position: 236164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236073-236164:1:exon

DK880_RS01010
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 247481
locus tag: DK880_RS01010
old locus tag: DK880_00207
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:236107..236109,aa:Ser,seq:cga)
SIO_010081: DK880_RS01010
subclass of: SO_0000673
so part of: DK880_RS01010
location: 236073..236164
location: region:236073-236164:1
so has part: feature:236073-236164:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:236073-236164:1:exon

DK880_RS05095
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05095
so part of: sequence
location: 236702..236878
location: region:236702-236878:1
so has part: feature:236702-236878:1:exon
subclass of: SO_0000010

position:236702:1
position: 236702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236878:1
position: 236878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236702-236878:1:exon

DK880_RS05095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05095
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIFFIAMVVEGCNNGIIMRMNNKTGNSETTRSKEENTSNKYNLLPVCASSSLKKYDTI
SIO_010081: DK880_RS05095
subclass of: SO_0000673
so part of: DK880_RS05095
location: 236702..236878
location: region:236702-236878:1
so has part: feature:236702-236878:1:exon

WP_204082277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:236702-236878:1:exon

DK880_RS01015
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01015
old locus tag: DK880_00208
so part of: sequence
location: 237056..238237
location: region:237056-238237:1
so has part: feature:237056-238237:1:exon
subclass of: SO_0000010

position:237056:1
position: 237056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238237:1
position: 238237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237056-238237:1:exon

DK880_RS01015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01015
old locus tag: DK880_00208
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGLDWIPMRKPKPGFEKRFKQLLQLLDVNGYVGDKDKDTSEEGKGFLSPREILLVGGLVGGIVGGAIGNSFGCMVKDKLVGIVGGIVGGIVGGIVGGMVGSMIRSIDRSMNEAVVGCIGGVICGSLACIGDAFKGICTGMFFGRYVGIPVSRFVAMVGRMGETLYDNREELLQEWEEREELLQEWEEISDSHCETIKAPMIGRDIIADNWIRAAYQKTDKTISEEEFIKESEGYYVVELAAQSDGTPFCLPMAVKYDWIREVYKKKSEDNPYNYTLVGPVDCYHIFYDGFKSGFRAKALEDCLDLIGDDLSSEAWGSKLADETLRYGQQLMTIADKIASANNMFYLKEQLNYPEETEEEIEEATLEQKIYTLYQAAKWLIFYGKNGHGFHIDF
SIO_010081: DK880_RS01015
subclass of: SO_0000673
so part of: DK880_RS01015
location: 237056..238237
location: region:237056-238237:1
so has part: feature:237056-238237:1:exon

WP_109996989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237056-238237:1:exon

DK880_RS01020
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01020
old locus tag: DK880_00209
so part of: sequence
location: 238478..239020
location: region:238478-239020:1
so has part: feature:238478-239020:1:exon
subclass of: SO_0000010

position:238478:1
position: 238478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239020:1
position: 239020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238478-239020:1:exon

DK880_RS01020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01020
old locus tag: DK880_00209
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHWLLFIQTNFIPLEESLLTVVFPLLLSWIPIYLWLNPSIKLLNLSCSHLTLRVVAWLVIGLPTIFAQDYLVKATSKLTQLDNITLFEKSAPKKYYSLDHYYIDKTRIGIKHTTTSTGRRNETLDLCIYVTLPILTNWTDIAKREYPYWLGKKYTKTISNRLSDQEKEFKWNAFYWAGNY
SIO_010081: DK880_RS01020
subclass of: SO_0000673
so part of: DK880_RS01020
location: 238478..239020
location: region:238478-239020:1
so has part: feature:238478-239020:1:exon

WP_162534077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238478-239020:1:exon

DK880_RS01025
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01025
old locus tag: DK880_00210
so part of: sequence
location: 239405..241096
location: region:239405-241096:1
so has part: feature:239405-241096:1:exon
subclass of: SO_0000010

position:239405:1
position: 239405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241096:1
position: 241096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239405-241096:1:exon

DK880_RS01025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01025
old locus tag: DK880_00210
inference: COORDINATES: protein motif:HMM:NF025224.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHVLYAKADQNQPPYNAVHPYEIYKFGKDDASIERSIRFAKEHNVAHISYVGPIRPTYMAMLFNLLKDFKLKYLSLGCIDGGSVGNEDIEILVSEFPNLQYLRLYHNKIGSKGAETLAKKLKVVQHLNLGSGNIGDKGAEALANGFPKLQELHLASNKIGNKGAEGLVKGFPKLQYLDLDGNSIGNEGIKALVNGFPNLHELHLASNKIGDKGAEVVASGFPKLQRLYLASNKIGHKGAEVLASGFPKLQYLDLNGNSIGNKGIKALVNGFPNLHELHLASNKIGDKDVKELAKGFLELQYLNLDGNKIGNEGIKALASGFQKLRKLHLASHKIGDETIKILVNGFPYLQELHLASNNVGDKGVKVLSNGFPNLQRLHLKSNKIGNEGIKALVSGFPKLQELYLDGNNIGDEVIEILVSGLPDLQELHLASNKIGNKGAEALASGFPKLRQLYLASDKIGNEGAEALAKGLPMLQQLRLKSNSIGYVGAKALAKGFPNIQQLYLHSDGIPYEFVKILEETTHLQVLSNNESKEIGKGIGRAIGKGVGKEIGKGIGRGIINLFT
SIO_010081: DK880_RS01025
subclass of: SO_0000673
so part of: DK880_RS01025
location: 239405..241096
location: region:239405-241096:1
so has part: feature:239405-241096:1:exon

WP_162534078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:239405-241096:1:exon

DK880_RS01035
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01035
old locus tag: DK880_00211
so part of: sequence
location: complement(242392..244173)
location: region:242392-244173:-1
so has part: feature:242392-244173:-1:exon
subclass of: SO_0000010

position:242392:-1
position: 242392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244173:-1
position: 244173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242392-244173:-1:exon

DK880_RS01035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01035
old locus tag: DK880_00211
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: DUF1609 domain-containing protein
translation: MNSGAKEIPCLTIYSLHNYEYLVLPNTILKDIPKEYQEEVESYLVKKILSFLDRLIEVMRDAYNIHIQNLDHNIRHLKSENIQITGILFFKKFFTDICSLKGLPKKFANALKKKLDQGKANGITVGELWQWTFKNILMYINQQLYNNLDQFDAEKYGYSNYEDAEKKIIKLIMGKMCEEAEKQVSIKYYTVSSEIVSAIFQDKAISKNLLISSLTTRQKENKKLDFTGELTLDISMEEFQFLIDSVCSNNHTSSYVAKIYTAFKKNGSRGTLKDFFSKRDKINQENKATRDNIRDQKGEDEANQLYQAYEESAKNKPQSFKEYLNEKEASKPIEDLLKALGLNQTEKEKKANLSKTKKAKMNKQGHKKPIEKRSSSTNNTESELISKTITDRCQNKKSNNRLVPDPFEYHSRVKKWEQDPDDLLAYFRNVSTGPDLKYKKVNSSPEKVTEEKFRHDVRPVGQITKQPDKADYFFTLGNTISSTGKINRRQSALAVLSDNNGKRQQGIIDIAITETVGGKEMIYHQMFRCLDELETIFKHENSSDTPEKQPEQSVPVLVSNRSLYKDTNGTYVITINENTYNKFLRILPWNRID
SIO_010081: DK880_RS01035
subclass of: SO_0000673
so part of: DK880_RS01035
location: complement(242392..244173)
location: region:242392-244173:-1
so has part: feature:242392-244173:-1:exon

WP_162534079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242392-244173:-1:exon

DK880_RS01040
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01040
old locus tag: DK880_00212
so part of: sequence
location: 244587..245078
location: region:244587-245078:1
so has part: feature:244587-245078:1:exon
subclass of: SO_0000010

position:244587:1
position: 244587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245078:1
position: 245078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244587-245078:1:exon

DK880_RS01040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01040
old locus tag: DK880_00212
inference: COORDINATES: protein motif:HMM:NF024206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MIYQILKYIKFPPLYVAIENNHVINCITALIEKKEVNINLQDNKEKTPLQLAAENGREGVYIRFLINKGANRNLPDNNNLTPLDMAERYSRDANCINALTHHSAKENQTNAAYKDNAHIKSFVIAMENSDQKDSNGQASLPMVANASQAKTRKVEVKVEIKVE
SIO_010081: DK880_RS01040
subclass of: SO_0000673
so part of: DK880_RS01040
location: 244587..245078
location: region:244587-245078:1
so has part: feature:244587-245078:1:exon

WP_162534080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244587-245078:1:exon

DK880_RS01045
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01045
old locus tag: DK880_00213
so part of: sequence
location: 245428..248565
location: region:245428-248565:1
so has part: feature:245428-248565:1:exon
subclass of: SO_0000010

position:245428:1
position: 245428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248565:1
position: 248565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245428-248565:1:exon

DK880_RS01045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01045
old locus tag: DK880_00213
inference: COORDINATES: protein motif:HMM:NF033057.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MKIIKFIYYPSNKQMVHVFIQKVSQVLFWGFSFIFICSCSKQLHQVHPEHGQTILFISNLHEAVNHKIVDCIKNFIKKKGANVNLQDDKGQTPLHLAAVDGYKEGIKLLIENGANVNLQDDKGQTPLHLAAFNGRDNCIPVLIDNGANVNQEDNIKQTPLHLAAENGRDNCIPVLIDNGANVNQEDRYQHTPLHLAAAKGEEACIRYLIKKKADVNPKDNIKRTPLHLAAINGCDNCIPVLIDNGADVNLKDDNGLIPLHLAAFNGHETCIRLLINNKEADVNLPDNNGLIPLHYAVENGRDNCIPVLIDKIDKGANVNLQNNKGQTLLHHAVARGDEKFIKLLIEKGANVNIQDNNKRTPLHYAVARGDEKFIKLLIENGANVNIQDNNQQTPLHYAAARGNYKFIKLLIENGANVNLQDNNKKTLLHHAVARGDEKFIKLLIENGANVNQEDRYQHTPLHLAAAKGEEACIRYLIKKKADVNPKDNIKRTPLHLAAINGHDNCIPVLIDNGADVNLKDDNGLIPLHYAAFNGHETCIRLLINNKEADVNLPDNNGLIPLHYAAFNGHETCIRLLINNKEADVNLPDNNGLIPLHYAVENGRDNCIPVLIDKGANVNLQNNKGQTLLHYAAARGDEKFIKLLIENGANVNIQDNNKRTPLHYAVARGDEKFIKLLIENGANVNIQNNNGLTPLHYAAALGNDKSIKLLIENGANVTLQDKEGKTLLHLAVARGDEKFIKLLIENGANVNIQDNNKRTPLHYAAALGNYKFIKLLIDKRANVTLQDKEGKTPLYYAELKGHKACSRLLIENGANVNLQDKEGKTLLHHAVARGDEKFIKLLIENGANVNLQDKEGKTLLHHAVARGDEKFIKLLIENGANVNLQNNKGQTLLHYAAARENDKFIKLLIENGANVNIQDNNKRTPLHYAAALGNYKFIKLLIDKRANVTLQDKEGKTPLYYAELKGHKACSRLLIENGANRNLPDNNNLTPLDAAYKDNAHIKSFVIAMENSDQKDSNGQASLPMVANASQAKKRKVEVKVEIKVE
SIO_010081: DK880_RS01045
subclass of: SO_0000673
so part of: DK880_RS01045
location: 245428..248565
location: region:245428-248565:1
so has part: feature:245428-248565:1:exon

WP_109996995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245428-248565:1:exon

DK880_RS01050
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01050
old locus tag: DK880_00214
so part of: sequence
location: 248928..250754
location: region:248928-250754:1
so has part: feature:248928-250754:1:exon
subclass of: SO_0000010

position:248928:1
position: 248928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250754:1
position: 250754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248928-250754:1:exon

DK880_RS01050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01050
old locus tag: DK880_00214
inference: COORDINATES: protein motif:HMM:NF024206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MKRIKLIYYPSNKQMVHVFIQKVSQVLFWGFSFIFICSCSKQLHQVHPEHGQTILFISNLHKAVDHRIVDCIKNFIKKKGANVNLQDDKGQTPLHLAAVDGYKEGIKLLIENGANVNLQDDKGQTPLHLAAFNGRDNCIPVLIDNGANVNQEDRYQQTPLHLAAINGRDNCIPVLIDKGANVNQEGRYQQTPLHLAAINGYETCIRLLINKEADVNRQDNNGFTPLHYAAINGRDSCIPVLIDNRANVNLPDSKGKTPLHLAALNGYETCIRLLINKEADVNRQDNNGFTPLHYAAINGRDSCIPVLIDNRANVNLPDSKGKTPLHYAAEYNREEFMNLLIDNGANVNLQDNNGLTPLHYAAALENDKFIKLLIENGAKVNLQDNNKQTLLHHAVARGDEKFMNLLIENGAKVNIQDNNQQTPLHLAAINGHKVSIRFLIILINKANVNLQDNNGFTPLHLAAINRHEACIKLLIDKRANVTLQDKEGKTPLYYAELKGHKACSRLLIENGANRNLPDNNNLTPLDMAERYSRDANCINALTHHSAKGNQTNAAYKDNAHINSFVIAMENSDQKDSNGQASLPMVVDNNNASQAKKRKVEVKVEIKVE
SIO_010081: DK880_RS01050
subclass of: SO_0000673
so part of: DK880_RS01050
location: 248928..250754
location: region:248928-250754:1
so has part: feature:248928-250754:1:exon

WP_109996996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:248928-250754:1:exon

DK880_RS01055
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01055
old locus tag: DK880_00215
so part of: sequence
location: 251117..252850
location: region:251117-252850:1
so has part: feature:251117-252850:1:exon
subclass of: SO_0000010

position:251117:1
position: 251117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252850:1
position: 252850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251117-252850:1:exon

DK880_RS01055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01055
old locus tag: DK880_00215
inference: COORDINATES: protein motif:HMM:NF024206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MKRIKLIYYPSNKQMVHVFIQKVSQVLFWGFSFIFICSCSKQLHQVHPEHGQTILFISNLHKAVDHRIVDCIKNFIKKKGANVNLQDDKGQTPLHLAAFNGRDNCIPVLIDNGANVNQEDRYQQTPLHLAAINGRDNCIPVLIDKGANVNQEGRYQQTPLHLAAINGYETCIRLLINKEADVNRQDNNGFTPLHYAAINGRDSCIPVLIDNRANVNLPDSKGKTPLHYAAEYNREEFMNLLIDNGAKVNIQDNNQQTPLHLAAINGHKASIRLLIILINKANVNLQDNNGFTPLHYAAALENDKFIKLLIENGAKVNLQDNNKQTLLHHAVARGDEKFITLLIENGAKVNIQDNNQQTPLHLAAINGHKVSIRLLIILINKANVNLQDNNGFTPLHLAAINRHEACIRLLINKGADVNQQDNNGFTPLHYAAALGNYKFIKLLIDKRANVTLQDKEGKTPLYYAELKGHKACSSLLIENGANRNLPDNNNLTPLDMAERYSRDANCINALTHHSAKGNQTNAAYKDNAHINSFVIAMENSDQKDSNGQASLPMVVDNNNASQAKKRKVEVKVEIKDE
SIO_010081: DK880_RS01055
subclass of: SO_0000673
so part of: DK880_RS01055
location: 251117..252850
location: region:251117-252850:1
so has part: feature:251117-252850:1:exon

WP_109996997.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:251117-252850:1:exon

DK880_RS01060
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01060
old locus tag: DK880_00216
so part of: sequence
location: 253301..254533
location: region:253301-254533:1
so has part: feature:253301-254533:1:exon
subclass of: SO_0000010

position:253301:1
position: 253301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254533:1
position: 254533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253301-254533:1:exon

DK880_RS01060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01060
old locus tag: DK880_00216
inference: COORDINATES: protein motif:HMM:NF024206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MLSAINNFTLTMQAKRMFHPFNFFIEKGHRILLFGIISFLLIVCNCNNKSKQNNQEQCSSDLHLAASQGNKSRIRNLIKDGAKVNQRDKDGRTPLHLAAEKGYKDCITILIESGADVNQKDNDDCTPYTIEPFPFLTKQGFTALHLAADKGHASCVQYLIEKGANVNQKNRCGQIPLHLAAKNNHPDCVQYLIEKGSNVNQLDCNEQSPLQLAIAMYLGISMNSKEGIKHLTCIKSLINQGTNLNQLDKRGYAPLHLAIRRDYASCVAILINNKADVNLKDKQGQTPLQLAIEMNNPSYITALIKGGANVNLKDKYGSAPLHAAADQGHSDCISALIKGGACVNQKSDFLGLAPLHRAVLKNNVHCVTALIKGGADVNLQDNNGQTPLHLAMERKYSNCIAILQSNGGKG
SIO_010081: DK880_RS01060
subclass of: SO_0000673
so part of: DK880_RS01060
location: 253301..254533
location: region:253301-254533:1
so has part: feature:253301-254533:1:exon

WP_109996998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:253301-254533:1:exon

DK880_RS05100
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05100
so part of: sequence
location: complement(254803..254949)
location: region:254803-254949:-1
so has part: feature:254803-254949:-1:exon
subclass of: SO_0000010

position:254803:-1
position: 254803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254949:-1
position: 254949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254803-254949:-1:exon

DK880_RS05100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05100
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYRRIYFQFFRKSSRRRSEFWEEYMRKKATVKKEKTKEFNLFGLHDDN
SIO_010081: DK880_RS05100
subclass of: SO_0000673
so part of: DK880_RS05100
location: complement(254803..254949)
location: region:254803-254949:-1
so has part: feature:254803-254949:-1:exon

WP_162534081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254803-254949:-1:exon

DK880_RS01065
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01065
old locus tag: DK880_00217
so part of: sequence
location: 255397..256392
location: region:255397-256392:1
so has part: feature:255397-256392:1:exon
subclass of: SO_0000010

position:255397:1
position: 255397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256392:1
position: 256392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255397-256392:1:exon

DK880_RS01065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01065
old locus tag: DK880_00217
inference: COORDINATES: protein motif:HMM:NF024206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MFRSLNVFIQKATHRVLLLGYSFIFICSCSKQIQQSDTKQWSNDLDLETGQGNENRIKNLIKGGAYVNQREKDGRTLLHLAAEKGYLDCISTLIKAGADVNQKDNDDCTFLYHRPSLVRLKTKNGFTPLHLAVENNHPDCVAYLIEKGANINQKDRYGQIPLHLAAEKGYLDCVIILMDHGSNANQLDNNNWAPLHLAAENSHPDCVQYLIEKGANVNQLDDQKRNPLQLAMYSKSYITENSERIKNFRCIEILTSLGTNLTQKSNYGNAPLHLAILNNYADCVQHFIDKGVNVNQPNNAGQTPLDLAIRMKRLKCINMLQANGGKESNAQ
SIO_010081: DK880_RS01065
subclass of: SO_0000673
so part of: DK880_RS01065
location: 255397..256392
location: region:255397-256392:1
so has part: feature:255397-256392:1:exon

WP_109996999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255397-256392:1:exon

DK880_RS01075
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01075
old locus tag: DK880_00218
so part of: sequence
location: 256939..258360
location: region:256939-258360:1
so has part: feature:256939-258360:1:exon
subclass of: SO_0000010

position:256939:1
position: 256939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258360:1
position: 258360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256939-258360:1:exon

DK880_RS01075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01075
old locus tag: DK880_00218
inference: COORDINATES: protein motif:HMM:NF024206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MKRLILFILSFKQLNNNLMFRSRTVFIRKAHRILFLGYIFMLICSFNKQIEQTTPLHAAAYEGKLDCLTALIKGGADVNLKDKNGSTPLHLAAQEGKLDCLTTLIKGGADVNLQDKYGQAPLHAAAYTGKLDCLTALIKGGADVNLQDKYGAAPLYAAAYAGKLDCITALIKGGADVNLKDKYGAAPLHAVVKMGHTNCMDALIKGGADVNLQDKDGLAPLHVAAEMGHTNCMDALIKGGAKVNLKNKNGAAPLHEAAYAGKLDCLTALIKGGAKVNLKNKNGWVPLHFAACTGKLDCLTALIKGGAKVNLKNKNGAAPLHAAAYTGKLDCLTALIKGGADVNLKNKNGPAPLHLAAEMGHTNCMDALIKGGADVNLKDKNGSAPLHLAAYTGKLDCLTALIKGGAKVNLKNKNGAAPLHEAAYTGKLDCLTALIKGGADVNLKDNNGAAPLHLAERCCHQDCIDILQANGGN
SIO_010081: DK880_RS01075
subclass of: SO_0000673
so part of: DK880_RS01075
location: 256939..258360
location: region:256939-258360:1
so has part: feature:256939-258360:1:exon

WP_109997000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256939-258360:1:exon

DK880_RS01085
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01085
old locus tag: DK880_00219
so part of: sequence
location: 258861..260396
location: region:258861-260396:1
so has part: feature:258861-260396:1:exon
subclass of: SO_0000010

position:258861:1
position: 258861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260396:1
position: 260396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258861-260396:1:exon

DK880_RS01085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01085
old locus tag: DK880_00219
inference: COORDINATES: protein motif:HMM:NF024206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MKRLILFILSFKQLNNNLMFRSRTVFIRKAHRILFLGYIFMLICSFNKQIEQTPSFSLHAAAYEGKLDCLTALIKGGADVNLKDKDGAAPLHLAAQEGKLDCLTALIKGGADVNLKNKDGLAPLYAAAYAGKLDCLTALIKGGADVNLKGNKHGSAPLHAAAYTGKLDCLTALIKGGAKVNLKNKDGSAPLHLAAHTGKLDCLTALIKGGANVNLKDKYGAAPLHVAAEMGHTNCMDALIKGGAKVNLKNKNGWVPLHFAACTGKLDCLTALIKGGAKVNLKNKNGAAPLHAVVKMGHTNCMDALIKGGADVNLQDKYGQAPLHFATYAGKLDCLTALIKGGAKVNLKRDKNGEAPLHFAAYTGKLDCLTALIKGGAKVNLKRDKNGEAPLHLAAYTGKLDCLTALIKGGADVNLKDKDGWVPLHFAAQTGKLDCLTALIKGGAKVNLKDKNGWVPLHLAAYTGKLDCLTALIKGGADVNLKNKDGAAPLHLAERCCHQDCIDILQANGGN
SIO_010081: DK880_RS01085
subclass of: SO_0000673
so part of: DK880_RS01085
location: 258861..260396
location: region:258861-260396:1
so has part: feature:258861-260396:1:exon

WP_109997001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:258861-260396:1:exon

DK880_RS01095
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01095
old locus tag: DK880_00220
so part of: sequence
location: 260896..263277
location: region:260896-263277:1
so has part: feature:260896-263277:1:exon
subclass of: SO_0000010

position:260896:1
position: 260896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263277:1
position: 263277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260896-263277:1:exon

DK880_RS01095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01095
old locus tag: DK880_00220
inference: COORDINATES: protein motif:HMM:NF024206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MKRLILFILSFKQLNNNLMFRSRTVFIRKVHRILFLGYIFMLICSFNKQIEQTPPLHAAAYEGKLDCLTALIKGGADVNLKNKNGSAPLHLAAEMGHTNCMDALIKGGANINLKDKDGQAPLHWAAYTGKLDCLTALIKGGADVNLKDKDGWVPLHFAAQEGKLDCLTALIKGGADVNLKGNKYGSAPLHLAAEMGYTNCMDALIKGGADVKLKDKYGQAPLHKAAYAGKLDCLTALIKGGAKVNLKDKDGQAPLHLAAYTGKLDCLTALIKGEADVNLKDKDGWVPLHFAAQEGKLDCLTALIKGGADVNLKGNKYGSAPLHLAAEMGYTNCMDALIKGGADVKLKDKYGQAPLHKAAYAGKLDCLTALIKGGAKVNLKDKDGQAPLHLAAYTGKLDCLTALIKGEADVNLKDKDGWVPLHFAAQEGKLDCLTTLIKGGADVNLKNKNGSAPLHLAAEMGHTNCMDALIKGGAKVNLKDKDGQAPLHKAAYAGKLDCLTALIKGGAKVNLKDKDGQAPLHLAAYTGKLDCLTALIKGGADVNLKNKNGSAPLHLAAEMGHTNCMDALIKGGADVKLKDKYGQAPLHKAAYAGKLDYLTALIKGGADVNLKDKNGWVPLHFAAQEGKLDCLTTLIKGGADVNLKNKNGSAPLHLAAEMGHTNCMDALIKGGADVNLKNKYGQAPLHKAAYAGKLDCLTALIKGGAKVNLKDKDGQAPLHLAAYTGKLDCLTALIKGGADVNLKDKNGWVPLHFAAQEGKLDCLTALIKGGADVNLKDKNGWVFLCILQHKKAS
SIO_010081: DK880_RS01095
subclass of: SO_0000673
so part of: DK880_RS01095
location: 260896..263277
location: region:260896-263277:1
so has part: feature:260896-263277:1:exon

WP_109997003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:260896-263277:1:exon

DK880_RS01100
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01100
old locus tag: DK880_00221
so part of: sequence
location: 263235..263507
location: region:263235-263507:1
so has part: feature:263235-263507:1:exon
subclass of: SO_0000010

position:263235:1
position: 263235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263507:1
position: 263507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263235-263507:1:exon

DK880_RS01100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01100
old locus tag: DK880_00221
inference: COORDINATES: protein motif:HMM:NF012253.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MGVPLHFAAQEGKLDCLTALIKGGADVNLKNKNGSAPLHLAEDLVIKIVLIYYRLMEETRSCHLYSSFKMKARCIFPKACNERIGFSLIK
SIO_010081: DK880_RS01100
subclass of: SO_0000673
so part of: DK880_RS01100
location: 263235..263507
location: region:263235-263507:1
so has part: feature:263235-263507:1:exon

WP_109997004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:263235-263507:1:exon

DK880_RS01105
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01105
old locus tag: DK880_00222
so part of: sequence
location: 264232..265647
location: region:264232-265647:1
so has part: feature:264232-265647:1:exon
subclass of: SO_0000010

position:264232:1
position: 264232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265647:1
position: 265647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264232-265647:1:exon

DK880_RS01105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01105
old locus tag: DK880_00222
inference: COORDINATES: protein motif:HMM:NF012235.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MVYKPIQIKGLTLYFSHKTVVEDFNCQITYGSRIALIGKNGSGKSTLLKVMAGIVEPAGGTLYKDKATVIGYVPQIIEDYANLSGGQRLNTAITEALRLDPNVLLLDEPTNHLDKHQRKSLMCLLQAYSGTLIIASHDTELLRNCMDTLWHMDNGAIHIFSGNYDDYIHKINLKRASIESDLERLSRQRKDMHNKLMQTQERASKRKAYGEKKYAADKLALRAAQGSGQNSCSKKKAKIRENKEALFNQLESLRQPALIKPKFFIANHEVARRSVVQISGGLVGYCLDQPLLSDINLTLSGQDRLALAGDNGSGKSTLIKAILGDKSVHKTGEWYVVKREDIGYLDQHYSTLSPSKSVLETISTLVPDWSHAEVRRHLNDFLFRNNEEVNTCVHTLSGGEKARLTLAQIAANPPKLLLLDEITNNLDLETKGHVVQLLKAYPGAMIVISHDTDFLEKIGITQVVDVASFKL
SIO_010081: DK880_RS01105
subclass of: SO_0000673
so part of: DK880_RS01105
location: 264232..265647
location: region:264232-265647:1
so has part: feature:264232-265647:1:exon

WP_109997005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264232-265647:1:exon

DK880_RS01110
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01110
old locus tag: DK880_00223
so part of: sequence
location: complement(265740..266525)
location: region:265740-266525:-1
so has part: feature:265740-266525:-1:exon
subclass of: SO_0000010

position:265740:-1
position: 265740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266525:-1
position: 266525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265740-266525:-1:exon

DK880_RS01110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01110
old locus tag: DK880_00223
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRDSLILDNFFIFDFDLKGEEKFDIENNKISLCLAKKTDRELELIKNKYLHLEELSKLSKYTYTLKRRSFLLGRIVVKKLIAHHINNNSYSKDIKINNTIEGEPFIEGSNFNISIAHSDDLGAAVISPPCIKATIDIEYTAHLQKIDSSSFSNSDLYMFQSILQQEAYVIQTCLWASKEALVKFLGIGFTIPFDLLDLEKVVNYDTDIFFIYFKNFKSVKVVVIKEKGIILAICLSKPINITNLREFAILFRFYINQIFIE
SIO_010081: DK880_RS01110
subclass of: SO_0000673
so part of: DK880_RS01110
location: complement(265740..266525)
location: region:265740-266525:-1
so has part: feature:265740-266525:-1:exon

WP_109997006.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:265740-266525:-1:exon

DK880_RS01115
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01115
old locus tag: DK880_00224
so part of: sequence
location: complement(266518..267930)
location: region:266518-267930:-1
so has part: feature:266518-267930:-1:exon
subclass of: SO_0000010

position:266518:-1
position: 266518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267930:-1
position: 267930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266518-267930:-1:exon

DK880_RS01115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01115
old locus tag: DK880_00224
inference: COORDINATES: protein motif:HMM:NF013739.2
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MRKKSIAIIGGGGAGATAAWALSKVHNISLFEMENTLGGHAYTETLEINGHRVKVDLGVEYFSEKQAPNLYTLLNHFKIDTFIAPLSFGAASKEKNDEFWTNTHIKGPIWEKISRECSRFHAQMHEIIHLDNPIVQKTTLGQFLKQENYSKDFIYKALLPLLTTFSSGNSQTLAYSLTFCAISFSMGLLSFFHPTYWRKSEEGIGNYLSKISQELGDKIHLNSKVVKVERDSNCVLIYVDKKPPLKFDEVIFATHADTTLSMISNPTDEEKNILGHFEYTPIECVLHSDLSILTKKFNATIYCEFTYKQHEDRFIGSLTRVINCLDPYKHIETPILVTFDPKFTISDQYIYLKKYWKIPKLRPQDMSNKKNIRKLQGKNHFWFCGTDTSLTGHEGAIVSGLVVADALGAYYPFSHNNWATMQFNIVKNIMGIYTPYEQVTNIITNSIYFIAKSLGLHKSQVSKVFLDFYA
SIO_010081: DK880_RS01115
subclass of: SO_0000673
so part of: DK880_RS01115
location: complement(266518..267930)
location: region:266518-267930:-1
so has part: feature:266518-267930:-1:exon

WP_109997007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266518-267930:-1:exon

DK880_RS01120
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01120
old locus tag: DK880_00225
so part of: sequence
location: complement(267948..268505)
location: region:267948-268505:-1
so has part: feature:267948-268505:-1:exon
subclass of: SO_0000010

position:267948:-1
position: 267948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268505:-1
position: 268505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267948-268505:-1:exon

DK880_RS01120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01120
old locus tag: DK880_00225
inference: COORDINATES: protein motif:HMM:NF013053.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isochorismatase family protein
translation: MLINHKEACVLIFSMQKDFLPSLINGQNVLDSCYWLVDLANHFDVPVIIIEHKKLGASIGTLTKIAQNPLHAEVVHFSCLKEPIVQDKISKLKRKQFLLAGAESHIAISQSAIDFKKNGSDTFVIVDAITARNEIDHLTAINRLNQLNIPIVTKEMVFFEFIDNSEYSNYIDMSLKFLDRRYIRE
SIO_010081: DK880_RS01120
subclass of: SO_0000673
so part of: DK880_RS01120
location: complement(267948..268505)
location: region:267948-268505:-1
so has part: feature:267948-268505:-1:exon

WP_109997008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:267948-268505:-1:exon

DK880_RS01125
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01125
old locus tag: DK880_00226
so part of: sequence
location: complement(268552..271683)
location: region:268552-271683:-1
so has part: feature:268552-271683:-1:exon
subclass of: SO_0000010

position:268552:-1
position: 268552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271683:-1
position: 271683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268552-271683:-1:exon

DK880_RS01125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01125
old locus tag: DK880_00226
inference: COORDINATES: protein motif:HMM:NF012337.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta fold hydrolase
translation: MKDNHILIQLKNIFAAVLLCSEEELMLDRPYIDMGVDSILAIQIAKLIKIKLGYEIFSSDLYNFTSINDLAIHMERLKASEQTHSSKGNNFKPNKKENKEKIAIIGISGRFPGAASPNEYWENLIHSKCSITNGNRWDGFTDKKYKGGFLENITHFDSNFFNISPREAALMDPQQRILMEVAWEAFEDAGLTKEALNDSKCGVFTTSLPGDYKNNTQDNKKIYNNFSFLGNAVSVNAGRISYFFNLKAPSINIDTACSSSLVAIDLAIKYLESGICDTALIGASCIFSTPELFKLAKNSNLLSKSGLCYSFDERADGFVPAETVSCIVLKKISDAIRDRHRIYGIMEAIGVNHDGYTNGLMSPNVDAQKELITSIYRGHEINLSELGYVEAHGTGTAIGDPLEIKALKESFEQLSDYKCYIGSSKANIGHALVASALASIIKIVLSFKHNTIPPQINFANLNPEIKLGAFKINTNVVKWPKEKNLAAISAFGFSGTNAHLVLRKPEQINLNKIDTIRPYIFLFSAKNKRQLEKLLHSYKIFLSGIEDQELACLSYSLNCSLTHFPNKFVSIAETKEQLLENINIFLNDKHNCSINTYQKPPYSKEEVMYRLTSNELTGKELYKYLAYIAYFLMHEEKITLQALYPNFVHNISLPSYPFCREYSWIGQDGSFHNTETSIKKNDAIEAYIDDNKWCVVDKLKTRLSDILGYKVEAISSDQPLQSFGIDSIVALQLLDIFQEEYGAVNPQIILTSNNLNELAENLEKLKKKNQSKPQLELNISNTTKIFSKEFAYNTILQDGIEWFIFGENNRNTIVFLPPLNTLAHVWIQQLRFFLKGNNTIYIPHYPGHGNSLFKEPDLENLVLSIFKSFEAIAGKYKKFDLLGWSLGGCIAIILSLVSPRVQNLILINTSAKFDNDIFAQSITLREALLYHQNYLQDLFDFSAQNIIDYISAGCSLEVLKYYYNRLQEFDATPKLSSLNVRCMIVYGENDPVINLHDINRLNFIRDSKIISFENEGHFIPLTAPFKFNRLIKNFMDYKDDIKL
SIO_010081: DK880_RS01125
subclass of: SO_0000673
so part of: DK880_RS01125
location: complement(268552..271683)
location: region:268552-271683:-1
so has part: feature:268552-271683:-1:exon

WP_109997009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268552-271683:-1:exon

DK880_RS01130
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01130
old locus tag: DK880_00227
so part of: sequence
location: complement(271680..278714)
location: region:271680-278714:-1
so has part: feature:271680-278714:-1:exon
subclass of: SO_0000010

position:271680:-1
position: 271680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278714:-1
position: 278714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271680-278714:-1:exon

DK880_RS01130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01130
old locus tag: DK880_00227
inference: COORDINATES: protein motif:HMM:NF012337.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family NAD(P)-dependent oxidoreductase
translation: MENRALHIFRSIWKKVGDSKELKDHDTIKVFLYFDNDVLEMIKSLNSSNIITYPITINDLTLDPENRFTSLQKELEKLNAKPLNVCIALTGSMNNLLTDYPILESFLKNTFFLFQTLLAIKEKINVLLLKESDCVLAGIMEGIGFSLVEEHSSFLFKSLEVKKLNEDGFRSKWLNGALFKAPFNLIKDNEIYEGSFESSQLTNINNTLLGKKVYLITGQGKIALRLAKFLSSKYQAKIIIFGRSALTEIEKNELPLQGVATYIKVDIGNLGELQEAWDYCLAKYEIIHGIFHLAGVLNDKLFQHKKYKEFAETLYPKIQCTINLDKISAQTKLDFFVCFSSLSGTMGNLGQADYAAANSFLKYWSMHRNQKYLQGERYGNSFCIDWGLWENGGMHIPYKQEKLLPLHTQEALHAMEYIFSSSIHYAIIYKGTPSLLIDFIKKFNNSAVVIPDFQFEQAENSFTKNLTHWVKEIIVAYTKLHDLEENDSIIEKGADSVAAINIASEIERKLRKINDQVRINKTILFDKPTIVLLTEYIKGHFLSEIKTIFSGFEKCIDTYSLSNEIAYSNSPVEEIKNHFPSARDDAIAIIGFAGQFPEADSIEVLWSNLIQGKNCIKIIPKDRWNWRKYYDPDPKNEGTAYGRHGGFLRSIKLFDPSFFNISPAEAERMDPQERLLLQNTYHAIQDSALTPESLYDSGVFISVMYGHYISYDEKKESIDSSYASLANRISYNFNFKGPSIAVDSMCSGGLTALHLAIQSVKNGDCASAIIGGVNLMPHPVKYKILSQGRFLSLSGKCNSFGKDADGYVPGEGAVVLIIKQLKDALKNKDYVYGIIRGSAINSGGKSAGYTVPNPTAQTEVIKKALERSLLPPEAITYLETHGTGTPLGDPIEIQGLTEAYKVPYKQHYALGALKANIGHLESAAGIAAIIKVLLQFRYKKMVPTINCSEENPLLNLKKTPFFLVKKLQDWMPVHNYPRVAGISSFGAGGSNAHVIIQEPPSSTVQNSPILPIYILPLSAKTAYSLKENVLNFKKWLKNVEHISLYSLSYSAACCREHFRYRCSVLFSSQEELVDKLEELVAESLWKHFKTSLLTINSTIENLLSSLHKDVESNEYVSLIREVNKLYKEGYNIPWEKIYKLRSVVKLPLYTFDLKEYWSNEFERSINNTLQQDTSITFQHYNSQEDLNYKETKKEIFYYISQWVKSSLDVKNITDTQNIILIDKLIYWEGYKNTYSYIVAPFDYKSFKDALNAIVFTNSSAKPIKIFINLQGHILENNNHYIEYFFEISQLIIKSVVFFEIVIVKEELGNIDDACYAALMGLFKSIILESNHIKVKLLTLSKSISGQQLLNIFINESTYYSKFFEEITYRHETRLVRTFHLQQFPNINKSLVLRDKGVYIISGGLGKIGQVIAEYLAHFFKATLILFGSSELTQDKKNVLKKLQTLGGKIVYKQVDITDVIQLQELINIVTLAYGNINGVIHAAGRTKDKLFFSKEIKDFKNIVDIKIKGAVALDEATKTQSLDFFLLFSSVASVFGNIGQTDYATGNSFMDTFATVRNVWVENKERSGRTASINWPLWDSGGMQVSKEKVNLIYEQQGIAPITNRAGLHILLSIINNINYISQGAIMPLQGDKIKINEALHGLFDIPIAKLELNSSCKMDASVVPEKILTHISELIKLDKHSIEMETTFGDIGFDSVLLQKLADKLKESFEVTVPPNIFFTFNTPGKIQQYIQDKLPKQTLNSNELIKDNSLSLSINDLTHKQSSYGYKVANCSIIGINGIMPNALSLEDFWRNMQSGINAIQPIKRWKNRNYYGGVIPQMKYFDPAFFNLSAREAMLMDPQHRLFLQVAYSTILDAGYNPQKLNKVGVFVGVQFNDYQILLQQWKQSRHPYAATGNAHAMLANRVSYLLNFNGPSQTVDSACSSALVALRRAVLALENYECDYALVGAVSLLIDHEVSDAAASMGVLSSQGRCATFDEEADGYVRGEGVGCVLLKRNSD…
SIO_010081: DK880_RS01130
subclass of: SO_0000673
so part of: DK880_RS01130
location: complement(271680..278714)
location: region:271680-278714:-1
so has part: feature:271680-278714:-1:exon

WP_162534083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271680-278714:-1:exon

DK880_RS01135
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01135
old locus tag: DK880_00228
so part of: sequence
location: complement(278704..279903)
location: region:278704-279903:-1
so has part: feature:278704-279903:-1:exon
subclass of: SO_0000010

position:278704:-1
position: 278704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279903:-1
position: 279903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278704-279903:-1:exon

DK880_RS01135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01135
old locus tag: DK880_00228
inference: COORDINATES: protein motif:HMM:NF019310.2
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MFIDGLGISIVLPLFSEMFLDLHKSILSPSTSIQTRNILYAASLIGFSLGMFIGSPILGELSDKYGRKRILLLSLIGTFVGYCLSGGGVVLKSPFMFLLGRIIDGLTAGSIPIAQAAMNDMSREDKKVGNMGLTLFAVTAGYIIGPLVAKFLSQSNKWANFGLETPFFVTALLSLCSILFLCLFKDQKPQNVDKKINLLTSLASFNVLEKIGDAKIILIALFFYQLGWTLFFQYLPYFLSAADYSKEIAKILSLIGGGMAISFCLLTKTFQKIFTPILGSIISVCIISLSIFMQVLRSESITSIYILSFIASLGYGLGYSFLLVYLSQNVDNTMQGLSMGLAASMSALSSAITALLGSFLVNISGLFTYIVSGFFFVICLMTLFIRMLILTKKCIYSGK
SIO_010081: DK880_RS01135
subclass of: SO_0000673
so part of: DK880_RS01135
location: complement(278704..279903)
location: region:278704-279903:-1
so has part: feature:278704-279903:-1:exon

WP_162534084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278704-279903:-1:exon

DK880_RS01140
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01140
old locus tag: DK880_00229
so part of: sequence
location: 280132..291654
location: region:280132-291654:1
so has part: feature:280132-291654:1:exon
subclass of: SO_0000010

position:280132:1
position: 280132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291654:1
position: 291654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280132-291654:1:exon

DK880_RS01140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01140
old locus tag: DK880_00229
inference: COORDINATES: protein motif:HMM:NF012873.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family NAD(P)-dependent oxidoreductase
translation: MGSVSMSLKTTPYQKLFWQVWKSNPLDQSLILRYIFELSGNLNSSHLETALKYYVRKIHKACNAYFFERDGIVWQASKNLSLNFEYRDLSGSTINIKEIIENNSVNFNLSTGPLYKFILTKIEKKRYLFLIAFSHIIFDGISYINFIQILENLYNNATKSWKEQNVFLSPTIRPYHKENIQFWDSFFSNNNFKQPLRFLTSTARHSNKANHQKRSFFIKTKIFTKEETATLLQAVVPFTLFHLMASAMASFIGKYNSILTQEAINIGYTVSIDDSKKGIGCFTNLNPLTVDYSPYSSPYEILLAIANTRKKIKPHQAVPFLELLNRLSTKNNNPSRSFNILINHSPGLIGIATPHLKGLKSKLMASPATEGPYDIGLIYNILNGKLHIQLNIAEQLSSKEQIEEMFINFNKTLNFFITKLNTPFLALHYYSKHSHIHGPPIHLQHPNGLSDIFKNSFKCYANKAALIFKDKFWNYKELELEVLKLQALLDIKLPKLHADLSYNIGIHLNRSQNLVFCLLTAILKKICFVPLDPNFPNRRLKYFIENANVNYILTDRDTITKSELNTICSNNTFIVIDEKNEHLDIVCTKLMEEERNLNKAQYILFTSGSTGAPKGVRISHKNLYNFILAMHERIPCREEDYLLSITSLNFDISLLELLLPLSVGASVDIAASDSISNSYALAERIKNTPTTIVQATPSTWKMLQVIDWFSNRKLKILIGGENLEEHLAAYLLAQHHDVYNMYGPTETTIWSSCVLVTTPYTISLGQPIGNTTFYILDPQKRPCPLGMPGELWIGGEGVGLGYLNNDTSEKFKSLSTGEYVYKTGDIVSYFGKKYLKFIGRNDNQIKIRGFRVDLSEITAAIKQIINCIEVVTIVRLIPEIHIVSFVQGTTNNKEENSTIEKLSTILPHYMIPQRIISLKQLPLTLHNKIDLKKLQEEDIKLLITQYGYNNTPNKQLQMVPLKHSINDDESTEQKILKILEEHFNLTLLHTNYQTPFGHFGLHSINLNKLSSIINQKFNTSIKPYEFYQHNNFIKLCGHIEKQLGDKIYSKKPSIHINLTNSTHDVSIIGISARLPGATNINYFWHNLIANINTIKLNNSSRPTLPPGLKAGFINDIDKFDASFFNISPLEATYMDPQQRLLLETSWAALEDAGYNPLSLEESKIGVYIAATNFDYYSVYRASTTPIPYTMPGLVSSMLSNRISYFFAWSGPSQTFDTACSGSLVALSKAYNDLLEGRIDYALVGSTNIILDNYTNEALTIGNFLSSQGRCATFDEEADGYVRGEGVGCVLLKRNSDAVRDKDNIYGNIISCSENHGGKAHSLTAPNPEAQKALLIHAYKDKALARRVSYIETHGTGTKLGDPIEIDALKMAWRALGIWEDKPYIGLGSVKTHIGHLEPAAGIASLLKVLLSIKHKALPGNLHFNKLNPYIAIHNSPFYIVSNNQSWESDTLRVAGISSFGFGGSNAHVVIEEALPREIDTNFTDKPFYLVCLSAKALYSLQQSQKNLAHYLANLSNKAYSLANIAYTLNSGRSHFPYRCAWIIKNIAELIDGLHQQTEAIVAVSSKEKMVETLGDYRNRDTYYCELQERRKQYLAGYDLDWELLHDHEPKLRLSLPTYPFYTKPYWFETAADSSMINKTANSLATAHAIDKSGIYCIAKINDSSVKVTIDGNHPWLAEHIINDHKMLPGVAHLSLVFSAMNKLDLLYDNLIFQNITWLQPIRSYDPLTIIIEFVKQTKGLHFYLKSLDNKQLFSRGEIIAQEKNIYGHSLKYFSEKPSYKHIYHKNELYQHFLKSGINYGAFFQGLNAIYILNEQLCYSEINIEYSFELLKTNLLDSAFQSILGLSLSSLNKAMLPFSAGQIIFTKEYFEDKKSKFYAYTIKKSSMRVDIEILNANKHKICTILDLGIRPINQVNNMTKVNIEKKQTEFLSNLTYTPKWDESPIESSLNVSPKKYIIIYTQASERIAQACYNLIRYNHDAILTPFVSEHSLITVEELISS…
SIO_010081: DK880_RS01140
subclass of: SO_0000673
so part of: DK880_RS01140
location: 280132..291654
location: region:280132-291654:1
so has part: feature:280132-291654:1:exon

WP_162534085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280132-291654:1:exon

DK880_RS01145
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01145
old locus tag: DK880_00230
so part of: sequence
location: 291671..292531
location: region:291671-292531:1
so has part: feature:291671-292531:1:exon
subclass of: SO_0000010

position:291671:1
position: 291671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292531:1
position: 292531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291671-292531:1:exon

DK880_RS01145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01145
old locus tag: DK880_00230
inference: COORDINATES: protein motif:HMM:NF012901.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyltransferase domain-containing protein
translation: MHADVYMFPGQGSQYKGMGEELFNNFPLETKEASEILGYDIKQLALQDEQDKLNYTLYTQPIIYFLSCLSYLEERKKVNSSSFVVCGHSLGEYAACFAAGIFDLFTGLKIVKKRAELMSEIKNGTMMAVIGTDSLKTETLLEYINLDNIDIATFNSHKQIVLSGLSNEIVEAEKLLEIQGFKCILLNVSGAFHSRQMEGVRIEFMRFLKDYEFSLPIIPIISSTTAMPLEYDFILENLGFQLVKSVKWLQTILYLQSLSLTVFKELGPGNMLTKLNEEIFKNNATL
SIO_010081: DK880_RS01145
subclass of: SO_0000673
so part of: DK880_RS01145
location: 291671..292531
location: region:291671-292531:1
so has part: feature:291671-292531:1:exon

WP_109997013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291671-292531:1:exon

DK880_RS05105
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05105
old locus tag: DK880_00231
so part of: sequence
location: complement(292611..293630)
location: region:292611-293630:-1
so has part: feature:292611-293630:-1:exon
subclass of: SO_0000010

position:292611:-1
position: 292611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293630:-1
position: 293630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292611-293630:-1:exon

DK880_RS05105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05105
old locus tag: DK880_00231
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQNLNFLKSITHLLLFSITILAGDCDLGEKEQERLMRAKISRGAFREAAGAEVRRRRESPSEAAAESPSEAAAESPSEAAAAESPSEAAESPSEAAAAESPSEAAAAEAAAAEAASEAAAAEAAAEAAAAEAASEAEVRRRRAAEVRRRREAAARHRREVAIRHLLTGIEAIETEEAMGRIIRRLAEIEAEIKAEEAAEAEVRRRRAAEVRRRRETVARRRREAAEIAARVSETKAEEILCAAEAAAKKEQTECAICLDQMDTEGQTLKRRIYLPIKSENVCAHAFHLGCLYELIIRASRTRTVPNDLYDCFCAVCRTPIPSENMEAIICIYRKYGGSF
SIO_010081: DK880_RS05105
subclass of: SO_0000673
so part of: DK880_RS05105
location: complement(292611..293630)
location: region:292611-293630:-1
so has part: feature:292611-293630:-1:exon

WP_162534086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292611-293630:-1:exon

DK880_RS01160
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01160
old locus tag: DK880_00232
so part of: sequence
location: complement(293729..294019)
location: region:293729-294019:-1
so has part: feature:293729-294019:-1:exon
subclass of: SO_0000010

position:293729:-1
position: 293729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294019:-1
position: 294019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293729-294019:-1:exon

DK880_RS01160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01160
old locus tag: DK880_00232
EC number: 2.5.1.75
inference: COORDINATES: protein motif:HMM:NF013845.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA dimethylallyltransferase
translation: MDARVEAMMEAGLVEEVEKLYPYQASNALQTIGYRELFNYLNKQHSLREAAAQIKHNTKQYAKKQMTWFKKDKAIVWFAPHDFKQIKAYLCQQMHR
SIO_010081: DK880_RS01160
subclass of: SO_0000673
so part of: DK880_RS01160
location: complement(293729..294019)
location: region:293729-294019:-1
so has part: feature:293729-294019:-1:exon

WP_109997015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:293729-294019:-1:exon

DK880_RS01165
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01165
so part of: sequence
location: complement(293995..294249)
location: region:293995-294249:-1
so has part: feature:293995-294249:-1:exon
subclass of: SO_0000010

position:293995:-1
position: 293995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294249:-1
position: 294249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293995-294249:-1:exon

DK880_RS01165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01165
inference: COORDINATES: protein motif:HMM:NF013845.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPYLTAWLAKEDPMYHNTIIDPKNPRRIIRALEVCLETGMSYTFWRQQKVNKEPLQNKDIHLIKIGLTQEKNHCIKRWMLELKQ
SIO_010081: DK880_RS01165
subclass of: SO_0000673
so part of: DK880_RS01165
location: complement(293995..294249)
location: region:293995-294249:-1
so has part: feature:293995-294249:-1:exon

WP_109997016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:293995-294249:-1:exon

DK880_RS01170
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01170
old locus tag: DK880_00233
so part of: sequence
location: complement(294514..295632)
location: region:294514-295632:-1
so has part: feature:294514-295632:-1:exon
subclass of: SO_0000010

position:294514:-1
position: 294514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295632:-1
position: 295632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294514-295632:-1:exon

DK880_RS01170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01170
old locus tag: DK880_00233
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQNLNFLKSITHLLLFSITILAGDCDLGEKKQERLIKAKISRRAFRETEAAAEEARRRGVKMGEAIRRQAENFAEEVRRKRAAAEIAARRSREAAAEAEVRRKREATAVLAALEVEAAAKAEAKRRRKVTEIAAKRRREAREAAAAEEAEEARHRREAAAAEEARRRREAAAAEEARHRREAAAAEEARHRREAAAAEEASQIGWFVVVVREGEEEIRRQDDIEATEAAEEARAIRIIEALETETAAAAVARRRREAAEIAARVSETKAEEILCAAEAAAKKEQTECAICLDQMDTEGQALQRRIYLPIKSENVCAHAFHLGCLYETIITASRTRTVPNDLYDCSCAECRTPIPSENMEAIICIYRKYGGSF
SIO_010081: DK880_RS01170
subclass of: SO_0000673
so part of: DK880_RS01170
location: complement(294514..295632)
location: region:294514-295632:-1
so has part: feature:294514-295632:-1:exon

WP_109997017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:294514-295632:-1:exon

DK880_RS05515
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05515
old locus tag: DK880_00234
so part of: sequence
location: complement(296030..296386)
location: region:296030-296386:-1
so has part: feature:296030-296386:-1:exon
subclass of: SO_0000010

position:296030:-1
position: 296030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296386:-1
position: 296386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296030-296386:-1:exon

DK880_RS05515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05515
old locus tag: DK880_00234
EC number: 2.5.1.75
inference: COORDINATES: protein motif:HMM:NF013845.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA dimethylallyltransferase
translation: MVAKTRYKEPSKNTGFHLIKIGLTQEKEPLYQKIDARVKAMMEAGLVEEVEKLYPYQASNALQTIGYRELFNYLNKQHSLREAAAQIKHNTKQYAKKQMTWFKKIRRSFGLHPMILSK
SIO_010081: DK880_RS05515
subclass of: SO_0000673
so part of: DK880_RS05515
location: complement(296030..296386)
location: region:296030-296386:-1
so has part: feature:296030-296386:-1:exon

WP_239302546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:296030-296386:-1:exon

DK880_RS05375
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05375
old locus tag: DK880_00235
pseudo: true
so part of: sequence
location: complement(<296363..>296631)
location: region:296363-296631:-1
so has part: feature:296363-296631:-1:exon
subclass of: SO_0000010

position:296363:-1
position: 296363
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:296631:-1
position: 296631
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296363-296631:-1:exon

DK880_RS05375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05375
old locus tag: DK880_00235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_034576516.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: DK880_RS05375
subclass of: SO_0000673
so part of: DK880_RS05375
location: complement(<296363..>296631)
location: region:296363-296631:-1
so has part: feature:296363-296631:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296363-296631:-1:exon

DK880_RS01180
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01180
old locus tag: DK880_00236
so part of: sequence
location: complement(297376..299532)
location: region:297376-299532:-1
so has part: feature:297376-299532:-1:exon
subclass of: SO_0000010

position:297376:-1
position: 297376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299532:-1
position: 299532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297376-299532:-1:exon

DK880_RS01180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01180
old locus tag: DK880_00236
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNKKNRILYFLLYYFIIVVSIGCNRIAGNLGINKFDMLPPSSEEAARLFEKVKKESLIIICTYGDLEDIKKILNKNMLSDNSCKKDIDVALLNNLYIFQEKKGGNYTYNKSLATWIEKNRQIKVYKRNPTEKAIYYYPYELKDKVYYKLEFYEEGVRANWKTYTKACASLVSYHQQKGVSKADLEESFLSLVKLAKEGTKFARLFLDYTKAIKSIEEPILTEIINNDYFQKSIVLSQHLTIFFIQIGEMEHAKNFSVITEKLLNGVKKNALPCHNFDQACNLEACISHHNWNYGLIMLHEHSYKEAEKYFIKVYNMNKNDAECIKTLFSVYCKLDARKAWAWCDAHPDVFRCAKILRNIAENTKLPSCEEVKEFSYTDMTSIIMTALLYTDNEKQEADYKDLIKTKILADKREFRKLPDEIQIKIKLADAYSNIYDKNLKEHLKKLSSVGRVDLLYRTSIIYANSGHYNEALECIKIAMQDDLSNRLLLDQKEILENSLIAPTQKALESTSITHETTAQLPTQPAIIRNKQKSKKENTESDVPLSTEEAFATNDSQKIHQYFQKIKREISKQEVLNPLESSNSNAHKIGWLIDDKKTPIQYAQAIRIGYTLFAAIHPNLEEELKNNNSLGRWKGVLNKGYVNAKKGDIGIKGLGNKIYEAKDLSAVTEGIRLIASKEYINESRNKLMLFDKILNHNEVPRYLVKCSFEEIPCPNYYE
SIO_010081: DK880_RS01180
subclass of: SO_0000673
so part of: DK880_RS01180
location: complement(297376..299532)
location: region:297376-299532:-1
so has part: feature:297376-299532:-1:exon

WP_109997018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:297376-299532:-1:exon

DK880_RS01185
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: miaA
locus tag: DK880_RS01185
old locus tag: DK880_00237
so part of: sequence
location: complement(300164..301099)
location: region:300164-301099:-1
so has part: feature:300164-301099:-1:exon
subclass of: SO_0000010

position:300164:-1
position: 300164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301099:-1
position: 301099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300164-301099:-1:exon

DK880_RS01185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: miaA
locus tag: DK880_RS01185
old locus tag: DK880_00237
EC number: 2.5.1.75
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934885.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
translation: MSFYRSKYLITIVGPTAIGKTAIAIKLAQYFQTEILSVDARQFYQGMAIGTAQPTLAEQEGVPHHFLAFLPVTANYSAGQFGGEARDCLYDLLLHHSVVIAVGGSGLYMQALCEGLIEMPSIAPSIRSMLQTTLEKKGLPYLTAWLAKEDPMYHNTIIDPKNPRRIIRALEVCLETGMSYTFWRQQKANKEPLQAKGIHLIKIGLTQEKEPLYQKIDARVEAMMEAGLVEEVEKLYPYQASNALQTIGYRELFNYLNKQHSLREAAAQIKHNTKQYAKKQMTWFKKDKAIVWFAPHDFKQIKACLCQQMHR
SIO_010081: DK880_RS01185
subclass of: SO_0000673
so part of: DK880_RS01185
location: complement(300164..301099)
location: region:300164-301099:-1
so has part: feature:300164-301099:-1:exon

WP_109997019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300164-301099:-1:exon

DK880_RS01190
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01190
old locus tag: DK880_00239
so part of: sequence
location: complement(301482..303374)
location: region:301482-303374:-1
so has part: feature:301482-303374:-1:exon
subclass of: SO_0000010

position:301482:-1
position: 301482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303374:-1
position: 303374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301482-303374:-1:exon

DK880_RS01190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01190
old locus tag: DK880_00239
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934630.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent DNA helicase RecQ
translation: MERIHILLQKHWGYTTFRPLQKEIIQGILDGRDLFVLLPTGSGKSLCFQLPALCHKGLTLVVTPLIALMKDQVAQLTQRGIYAEAIFSGMSNAEIERRLDNCLYGPVKLLYVSPERLHTDLFKLRAAALSIVTLVIDEAHCISQWGYDFRPSYLEIAHFKQTIPAANTVAFTATATKNVQLDIQKHLQLTDPLCFIQTFHRSNLIYWVTQTDHKLAKLLQALQHTTGPAIVYVHTRKKTQKVADFLYKNGITAAYYHAGLNMTERTSKQEAWAANKTRVMVATAAFGMGIDKADVSLVMHMDLPTSLEAYCQETGRAGRNNRPAYAILLYDLQDIITLRQRWKESYPTADQIRKVYQHLVNYYAIAVGSHAFITYDFDLEDFKKSIGLDTKLAYYGLKVLESEGFIQLNEAYYQPSKLYCPLSRKELYAFQLLHLSYDLLIKGLLRLYGGNLFTPYCTISEKKIAQCIQFTERQVEKQLYSLHQLKVIEYFPQKNQPQITFLTPRYPVLPLNIMRIEQKNKTAYKQIEAVVQYITNNCCCRLSTLLDYFEEESIICHQCDVCKGNSKAKETAKGKDYIIELITQGKQDIKALLAAVPIEKEKEYIALIRTMLDQRELCYQSPGRLQIVPK
SIO_010081: DK880_RS01190
subclass of: SO_0000673
so part of: DK880_RS01190
location: complement(301482..303374)
location: region:301482-303374:-1
so has part: feature:301482-303374:-1:exon

WP_109997020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:301482-303374:-1:exon

DK880_RS01195
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01195
old locus tag: DK880_00240
so part of: sequence
location: complement(303440..304396)
location: region:303440-304396:-1
so has part: feature:303440-304396:-1:exon
subclass of: SO_0000010

position:303440:-1
position: 303440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304396:-1
position: 304396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303440-304396:-1:exon

DK880_RS01195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01195
old locus tag: DK880_00240
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPIKKYFLNGCLLTFFFVVYAGNCNDANLKCSNVEEERDYYTYNPYVLPNYTLEEFHTLIEAKSFHTSIQKLKNRASQWHTTGTEPDPYEIWKHYREERESNSPALKEERAIQNFFDCWGNFIQNPTDSNEKKVIEAKQKLEADPKVKERFEKAAAIYLQPEKFILTKAEVDYYRYLRFMLDKPANTLDRLLDCLEKVHEVLKIWEKKNPMGVALWQKVCSQCADELKECKYFQYDENKNAIAKGLTLIDGLAKDPYGMSWHALGKELPHALWLLGEILDVLENKISLPLKKDAIQTFKTYCKIIQRSAMLEVIVPDL
SIO_010081: DK880_RS01195
subclass of: SO_0000673
so part of: DK880_RS01195
location: complement(303440..304396)
location: region:303440-304396:-1
so has part: feature:303440-304396:-1:exon

WP_109997021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303440-304396:-1:exon

DK880_RS01200
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: argS
locus tag: DK880_RS01200
old locus tag: DK880_00241
so part of: sequence
location: complement(304618..306363)
location: region:304618-306363:-1
so has part: feature:304618-306363:-1:exon
subclass of: SO_0000010

position:304618:-1
position: 304618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306363:-1
position: 306363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304618-306363:-1:exon

DK880_RS01200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: argS
locus tag: DK880_RS01200
old locus tag: DK880_00241
EC number: 6.1.1.19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010610690.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arginine--tRNA ligase
translation: MQLEAKLFSALKQAFLTLYHLNIEGEISPIQVTRKEFQGNFSIPLFPYFKRCKEEPMHLAEKIGEWMQKHTDLVASYNVISGFLNLVIRDSIWLAILKAIKGDLTYGCLARKNSKVVIEFSCPNTNKPQHLGHLRNNFLGSALAAILEAAGYSVVKVNLINDRGIHICKSMVAYAQFGEGETPESSGIKGDHLVGKYYVKFEQLYKEQCATPLPPIVQTAQKMLLAWEKGDPAVIALWKKMNGWVYEGFKETYERLGITFDRVYYESDTYLLGKAVVEEGLARKIFYRKEEGAIAVDLATYGLGEKVLLRNDGTAIYITQDLGTADLRYTDYHFDKMIYVVGDEQAYHFKVLFAIMETLGRPYAAAMYHLSYGMVNLPDGKMKSREGTVVDADQLVAEMVQTVKSYTEDAQKIEGLNAQALQQLYDVLAIGALKFFLLRVAPAKKIIFNPSESIDFQGDTATFIQYTYARICSLMRKAQAMGQAAAIDGNLSLNPLEQSIILQLALFPSQVEAAAQSYMPSIIANYVLELAKIYNKFYASYPILRVTDASLSSFRLFLSSCVAQVLQKSMELLTITLPEKM
SIO_010081: DK880_RS01200
subclass of: SO_0000673
so part of: DK880_RS01200
location: complement(304618..306363)
location: region:304618-306363:-1
so has part: feature:304618-306363:-1:exon

WP_109997022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:304618-306363:-1:exon

DK880_RS01205
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: gatB
locus tag: DK880_RS01205
old locus tag: DK880_00242
so part of: sequence
location: complement(306396..307853)
location: region:306396-307853:-1
so has part: feature:306396-307853:-1:exon
subclass of: SO_0000010

position:306396:-1
position: 306396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307853:-1
position: 307853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306396-307853:-1:exon

DK880_RS01205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: gatB
locus tag: DK880_RS01205
old locus tag: DK880_00242
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015266832.1
GO function: GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
translation: MCTQEHYQAVIGLEIHIQLLTNSKMFAPERAEYGALPNTHVSPITMAYPGALPWVNKTAFDYAIKLGLACKSEITEVNYFARKSYFYPDLPKGFQITQDATPICKGGFITLPDSKKKISLIRMHLEEDTGKSLHGIVEGTTLIDYNRAGIPLVEMVTAPTIETGREAYHFLAAVRKLVRYLEICDGNMEEASLRCDANVSVMPQGSTLLGTRVEIKNMNSMRHVQLAIEHEIARQTALLEAGQSITAETRNFQATSGITISLRAKETASEYRYLPEPDIPPVWVSAEWIAAIQATIPPLPEAYLQKFKETYGLPDYAATVLVEDKAFALFFDQLCQHTRYYKAAANWLLGPVKGYLNTQSLSLAEFPLTVQQMAALVAFVESGAINFSAAANQLFPLLLQQVDRTPKELALALNLIQDSDTGNLKALVREVVAVYPDKVAAYQKGKKGLFAMFMGEIRKKSQNKANPQLVARLLEEVLDSTEPTP
SIO_010081: DK880_RS01205
subclass of: SO_0000673
so part of: DK880_RS01205
location: complement(306396..307853)
location: region:306396-307853:-1
so has part: feature:306396-307853:-1:exon

WP_109997023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:306396-307853:-1:exon

DK880_RS01210
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: lptB
locus tag: DK880_RS01210
old locus tag: DK880_00243
so part of: sequence
location: complement(307876..308604)
location: region:307876-308604:-1
so has part: feature:307876-308604:-1:exon
subclass of: SO_0000010

position:307876:-1
position: 307876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308604:-1
position: 308604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307876-308604:-1:exon

DK880_RS01210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: lptB
locus tag: DK880_RS01210
old locus tag: DK880_00243
EC number: 7.5.2.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934357.1
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO function: GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
GO process: GO:0015920 - lipopolysaccharide transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LPS export ABC transporter ATP-binding protein
translation: MQLYVHSLTKSYKGRKVVKGVSLSVSPGEIVGLLGPNGAGKTTTFYMTVGLIKPNAGNIYLGNTCITSLPLYKRAQKGISYLPQEASVFRQLTVEENIMAILEMRDLSKQERKEKLERLLEEFSITHIRKRKGNLLSGGERRRTEIARTLAIDPKFILLDEPFAGVDPIAVEEIQLLITKLKNNNIGVLITDHNVDETLSITNRAYLLFAGALLKEGTAEELAADEQVRRLYLGEKFELKRY
SIO_010081: DK880_RS01210
subclass of: SO_0000673
so part of: DK880_RS01210
location: complement(307876..308604)
location: region:307876-308604:-1
so has part: feature:307876-308604:-1:exon

WP_109997024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307876-308604:-1:exon

DK880_RS01215
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01215
old locus tag: DK880_00244
so part of: sequence
location: 309072..310151
location: region:309072-310151:1
so has part: feature:309072-310151:1:exon
subclass of: SO_0000010

position:309072:1
position: 309072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310151:1
position: 310151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309072-310151:1:exon

DK880_RS01215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01215
old locus tag: DK880_00244
inference: COORDINATES: protein motif:HMM:NF015684.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LptF/LptG family permease
translation: MKLIDTYIYRKFFSTFLVALSITTLLIIFIHLTENVNHLKKEHLSYKQIGHYYCLLLPYMLSLLMPIIVFGTTIWVTTRLAQRSEIIALLSGGISFHRILLPYFMVACLLTAANFYLTGWLLATTNKSRLLFESKYLNNTVLTSNPPAYIHLKIGSNQYLHVNTYYPYSYTGYHVCLDTFQHATLIERIQAAKIKWDPKAQTWVLQSWQRRLFSSKKETLTEGDKLKLPLAVDPEDFSINPRLREGLTLPELDLHIQKLLLKGNDSVRFFIAEKYIRYMTPFAIIILITLGFLVAVHKPRGGIGRQITLGFVLAGLYIALFLSAKIITEAQSNYPLLEIWLPNIIFSLICIIFYILVPK
SIO_010081: DK880_RS01215
subclass of: SO_0000673
so part of: DK880_RS01215
location: 309072..310151
location: region:309072-310151:1
so has part: feature:309072-310151:1:exon

WP_109997025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:309072-310151:1:exon

DK880_RS01220
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01220
old locus tag: DK880_00245
so part of: sequence
location: 310219..310779
location: region:310219-310779:1
so has part: feature:310219-310779:1:exon
subclass of: SO_0000010

position:310219:1
position: 310219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310779:1
position: 310779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310219-310779:1:exon

DK880_RS01220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01220
old locus tag: DK880_00245
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MERKALILTVTVADYRFPENFSCWCAGTLEAKGVPTVLEILEIPKEAMSHESLQLQAAQLNRLEELLLLSDLLLLILPSHQNMLPTALAPSIQLLASKKHYKKCKLITIGMDVTKKSNEIDYDLAFNYSSDQLYKQLGPIRCTAPTQIQDSPTGDMCPLFAASYDSLCSLIQQILDMGSTECTTKV
SIO_010081: DK880_RS01220
subclass of: SO_0000673
so part of: DK880_RS01220
location: 310219..310779
location: region:310219-310779:1
so has part: feature:310219-310779:1:exon

WP_162534087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310219-310779:1:exon

DK880_RS01225
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01225
old locus tag: DK880_00246
so part of: sequence
location: 310921..311487
location: region:310921-311487:1
so has part: feature:310921-311487:1:exon
subclass of: SO_0000010

position:310921:1
position: 310921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311487:1
position: 311487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310921-311487:1:exon

DK880_RS01225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01225
old locus tag: DK880_00246
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHNQHKNSNHKIIYLIGKPGIGKYTISQELSKFGYVICDNHLINNPILSLLPYDGLSSVPESIWSTIAHIRHVVYNFIEQEAYNSYVLTNVLYEVETDQLIYQAVEQMAEKRKSLYIPVKLSISEKEHVKRIVNPSRKIRYKSINPEDVYIKYKLIEISHPNLLELDVTTRSAKESAETIVRHISCLQ
SIO_010081: DK880_RS01225
subclass of: SO_0000673
so part of: DK880_RS01225
location: 310921..311487
location: region:310921-311487:1
so has part: feature:310921-311487:1:exon

WP_109997027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310921-311487:1:exon

DK880_RS01230
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rmuC
locus tag: DK880_RS01230
old locus tag: DK880_00247
so part of: sequence
location: 311576..312850
location: region:311576-312850:1
so has part: feature:311576-312850:1:exon
subclass of: SO_0000010

position:311576:1
position: 311576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312850:1
position: 312850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311576-312850:1:exon

DK880_RS01230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rmuC
locus tag: DK880_RS01230
old locus tag: DK880_00247
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934223.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA recombination protein RmuC
translation: MLLLIGLFVCHSLRNASISALKNSLVNLERELEESKNQAKLLQQEHLKVSNELATAWAHNSHLKEKIAEQDASVNQLQTQLTIHFKNIANELLEEKNRKFTDQSRLQVEQLLTPLSEKITLFEKQVTQYNQENLARNVALRTELKQLHELNIKITQEAENLTKALKGDSKLQGGWGEFILENILIQSGLVKDREYIVQPAITTEEGQKFQPDVIIKLPGSRNIIIDSKLSLSHYEQFFNTEDSIQRMAHLKQHVHSIRRHIKTLSEKRYQLIYGLQNLDFVLMFIPIEPAFALAIQEAVTLFNEAYERNIVIVSPSNLIATLRTIANLWRQAHQNQNALEIAAQGGALYDKFVSFIEDIKNVGRQLDLTQKNYLEATKKLYEGRGSLVSRAHKMKLLGARTSKVLDQQLIDRAMPHETEEAPTP
SIO_010081: DK880_RS01230
subclass of: SO_0000673
so part of: DK880_RS01230
location: 311576..312850
location: region:311576-312850:1
so has part: feature:311576-312850:1:exon

WP_239302529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:311576-312850:1:exon

DK880_RS01240
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01240
old locus tag: DK880_00249
so part of: sequence
location: 313102..316590
location: region:313102-316590:1
so has part: feature:313102-316590:1:exon
subclass of: SO_0000010

position:313102:1
position: 313102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316590:1
position: 316590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313102-316590:1:exon

DK880_RS01240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01240
old locus tag: DK880_00249
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:solute symporter family protein
translation: MEQPIHYIDSLLIGIFLLVTFAIGFYYGRGIKTFQEYAVGNRKMSTMTLTTSLIATIYGAKALYIGLNQHYQKGIYAFMYLSGSLSVYLASKFLIVRMKEFIGNRSMAESMGTIYGPAVRVLTALLGIVLCATLLATQIKLGLNITTKLFPYNAPYQIIIIFLLVICYATFGGIRAVALTDVYQFFLFGLYVPLLICTLLYYSNDLLIDWKRITAIPQFNLNKVLTWDDTLKNSLSWLFWWSLFTSCNPAYIQRFYMASTVQQAVKVFRNSSLIRMFYFTPLFLFTAIVLHMKKNGTYPYQDILDYIIHLSYWPGMQGIFITAVFALLMSTADSILHIASVLFTNDIWSVLTKANKHKAAQHQLTVARIVSVVIGCISLTIAFLSTSITSFLEKTGVGFFYHLAVSIPFIITCLGFRPRSIVIFIAMCLNTMIGIYASYYKLSHHLTIIIIASILSLFIPHYLLPKLPNTGWVGVKDNTDWKLQNQLTKRWWQTKWQRIKMPFTSSYQAIIFPKRTSTFMLLGAYLIISSVLALYLIHKAYFLPYVYLYMAIMAIGTIIAIYPAFHSYKKEGSPLLYKLWPTLLFLLLFIIPFQFVKLSHYTPTVCAVLIFNVGLTSVLLSLENSITMLFLTIGIHQFIPPYLDFSNLLLTNSSNVTSIELIVTTAIITITLVGFGIYKQLRDKSVSKGKIMEITRAYEQRIALEAIYSQAHWAKLDATAGGNLLREMGHALQETSEALYKQDPTGLRNEIAFFNKKLQKFSDCLLWRAQEERSLKLNKKSIQSILLEPTILKVNQQILDLGEPLALLLRKQTDVAEIAVDPALLECLLLLNLWAISKSQQATDHIVTLTLAATILQYGLGAEASANQMPLTLPALAFCFSTDTILPTLQPSYSIPAMNANVTLPASEAQFYQLESKQIVEAHGGYVEIIESPTKVSCLYVFPLDGRKVMRFKTYDPVDLLANTLAETEESLAQEQELIGLLTTQTTLSAERIQQTIAFIKNAHGLVRRKSGAPYYTHPMAVAKLLLEATQDPDTILAGLLHDIVEDTPVTLSQLELMYGAEVAAVVDQVTHYNTNGYPWELDKLEDRNRLHQCEDICVVQVKLADRLHNMRTLYARKTSDQQRIAKETLAFYIPWGTKHHVPQQWLAEMQRICEGIIAKQL
SIO_010081: DK880_RS01240
subclass of: SO_0000673
so part of: DK880_RS01240
location: 313102..316590
location: region:313102-316590:1
so has part: feature:313102-316590:1:exon

WP_109997030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313102-316590:1:exon

DK880_RS01245
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01245
old locus tag: DK880_00250
so part of: sequence
location: 316803..320276
location: region:316803-320276:1
so has part: feature:316803-320276:1:exon
subclass of: SO_0000010

position:316803:1
position: 316803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320276:1
position: 320276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316803-320276:1:exon

DK880_RS01245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01245
old locus tag: DK880_00250
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:solute symporter family protein
translation: MVTHIDFIIIGLSLMGTLVIGIYYGRGIKTFQEYAVGNRKMSSSVIAISLIATIYGGSTLGVRLDQNYRQGFEILIAHSILIVPMLYLFSRVTIPRMKEFEKHFSIAESMGSLYGSAARIITALLSILLAIAYLTTQIKVGFEIMSILFPKIISFQTYSIILLTLLVIAYAAFGGARAVAITDVYQFLLFGLCFPMLIFVLLFSTEDLATGWQKLTAVPQFNLNKMCTGHTLTSLLPGFIFRLLVLVTPAYIQRFYMASSIGQAAKVFNKITIAPCVIALLIFSVAAALHIHGDNISSNQNVLHYVLSLAYFPGMLGILVTAMLALLMSTADSHLHISSVLFTNDLWPFVARFTKSDKPSLKIVRIVSLGIGVISLLMVFHTTSILQLMYKIFYLYDPAVSVPFIIACLGFRPRSLVVLITMGWNIIVATYFIFYQKQTITHNRVILSMIVSAGSLFALHYLLPKRPHTGWVGIPDSSAWDLQNQITKRWWLARMQRLKMLFTRSYRVNIFPTQERTFVAVGCYTIIHAIIALCFIQRQYFLPYVYLYMAVMALGTILALYPALHAYRKGGTPLLHNLWPMLLFLLLFIAPLQFAKLGHYSPMVCALWVGSLGLGIVLLSLETGSILLAVALGIHQTIPPYTPCLALAGWGLSMELVLATALVSITLVGFLLYKYLRDKVTAKLKVIELTRTYEQRISLEAIYSQAHWAKLDATAGGTLLREMGHALQETTDFLFNKDRSVVQNEIASFNKKLQKFSDCLAWRAQEERSLKLNKKSIQSILLEPTILKVNQQILDLGEPLALLLRKQTDVAEIAVDPALLECLLLLNLWAISKSQQATDHIVTLTLAATTLQYGLATETAADLPSLTLPALAFCFSTDTSLPTLQPSYSIPAMNAKVTLPASEAQFYQLESKQIVEAHGGYVEIIESPTQVNCLYVFPLDGRKVMRFKTYDPADLVANKIAETAESLAQEQELIGLLTAQTTLKEELIQQTIAFIKKAHGLVRRKSGSPYYTHPMAVAKLLLEATQDPDTILVGLLHDIVEDTPVTLPQIELMYGSEVAAVVDQVTRYNTNGYPWELDKLEDRNRLHQCEDICVVQVKLADRLHNMRTLSARKPSDQQRIAKETLAFYIPWGKSHKAPQQWMTEMQRICEGIIAKQL
SIO_010081: DK880_RS01245
subclass of: SO_0000673
so part of: DK880_RS01245
location: 316803..320276
location: region:316803-320276:1
so has part: feature:316803-320276:1:exon

WP_109997031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:316803-320276:1:exon

DK880_RS01250
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01250
old locus tag: DK880_00251
so part of: sequence
location: 320489..323956
location: region:320489-323956:1
so has part: feature:320489-323956:1:exon
subclass of: SO_0000010

position:320489:1
position: 320489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323956:1
position: 323956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320489-323956:1:exon

DK880_RS01250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01250
old locus tag: DK880_00251
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:solute symporter family protein
translation: MVTHIDFIIIGLSLMGTLVIGIYYGRGIKTFQEYAVGNRKMSSSVIAISLIATIYGGGTLGVGLDQNYRQGFEILIAQSILIVPMLYLFSRVTIPRMKEFEKHFSIAESMGSLYGSAARIITALLSILLAIAYLTTQIKVGFEIMSILFPKIISFQTYSIILLTLLVIAYAAFGGARAVAITDVYQFLLFGLCFPMLIFVLLFSTEDLATGWQKLTAVPQFNLNKMCTGHTLTSLLPGFIFRLLVLFIPAYIQRFYMASSIGQAAKVFNKITIAPCVIALLIFSVAAALHIHGDNISSNQNVLHYVLSLAYFPGMLGILVTAMIALLMSTADSHLHIASVLFTNDLWPFIAKFTKLHNRSLRMVRIASIGIGIISLLIVFHTTSILQLMNKTYYFYWPAVSVPFIIACLGFRPRSLVVLITMGWNIIVATYFIFYQKQTITHNRVILSMIVSAGSLFALHYLLPKRPHTGWVGIPDSSAWDLQNQITKRWWLARVQQFKMLLTRSYRVSIFPIQERTFVAVGCYTILHAIIALCFIQRQYFLPYVYLYMAVMALGTILALYPALHAYQKGGTPLLHNLWPMLLFLLLFIAPLQFAKLGHYSPMVCALWVSNLGLGIVLLSLETSSILLAVALGIHQAIPPYTTYLALASWGLSIELVLAVMLVTAAIIGLGIYKYLRDKATAKLNIIELTRTYEQRISLEAIYSQAHWAKLDATAGGTLLREMGHALQETTDFLFNKDRSVVQNEIASFNKKLQKFSDCLAWRAQEERSLKLNKKSIQSILLEPTILKVNQQILDLGEPLALLLRKQTDVAEIAVDPALLECLLLLNLWAISKSQQATDHIVTLTLAATTLQYGLATETAADLPSLTLPALAFCFSTDTSLPTLQPSYSIPAMNAKVTLPASEAQFYQLESKQIVEAHGGYVEIIESPTQVNCLYVFPLDGRKVMRFKTYDPADIVANKIAETAESLAQEQELIGLLTAQTTLKEELIQQTIAFIKKAHGLVRRKSGSPYYTHPMAVAKLLLEATQDPDTILVGLLHDIVEDTPVTLPQIELMYGSEVAAVVDQVTHYNTNGYPWELDKLENKNILHQCRDIRVVQVKLADRLHNMRTLSARKPSDQQRIAKETLAFYIPWGKSHKAPQQWMTEMQRICEGIIAK
SIO_010081: DK880_RS01250
subclass of: SO_0000673
so part of: DK880_RS01250
location: 320489..323956
location: region:320489-323956:1
so has part: feature:320489-323956:1:exon

WP_109997032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:320489-323956:1:exon

DK880_RS01255
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01255
old locus tag: DK880_00252
so part of: sequence
location: 324639..328127
location: region:324639-328127:1
so has part: feature:324639-328127:1:exon
subclass of: SO_0000010

position:324639:1
position: 324639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328127:1
position: 328127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324639-328127:1:exon

DK880_RS01255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01255
old locus tag: DK880_00252
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:solute symporter family protein
translation: MAIGQPIHYIDSLLIGIFLLLTLAIGLYYGKDIKTFQEYAVGNRKMSSMTLTTSLIATIYSAKSFYIGFNQHYQHGIYALKYVSGPLSVYLASKFLIVRMKEFIGNRSMAESMGTIYGPAVRILTALLGIVLCAIILAAQIKCGLLITTKLFPYYNTEYHTIIVFLLIICYATFGGIRAVALTDVYQFFFFSLYFPLLICTLLYYSNDLLIDWKRITALPQFNLNKVFTWDDTLKDTLSWLFWWSLVISCNPAYIQRFYMASTVQQAVKVFRNSSLIRLLFFTPLFLLTAIFFHLKKNGTYPYQNILSYIIHLSYWPGMQGILATTCFALLMSTADSILHIASVLFTNDIWSVLTKANKHKAAQHQLTVARITSVVIGFISLTIAFSLTSIITFLEKTGMTFFYHLSVSIPFIITCLGFRPRSIVIFIAMCFNTMMGIYIYYYNLKDHLTIILIASILSLFIPHYLFPKLPNTGWVGVKDNTAWKLQNQLIKRWWQTKWQRIKMPFTSSYQAIIFPKRTSTFMLLGAYLIISSVLALYLIHKAYFLPYVYLYMTVMAIGTIIAIYPAFHSYKKEGSPLLYKLWPTLLFLLLFIIPFQFVKLSHYTPTVCAVLIFNVGLTSVLLSLENSITMLFLTIGIHQFIPPYLDFSNLLLTNSSNVTSIELIVTTAIITITLVGFGIYKQLRDKSVSKGKIMEITRAYEQRIALEAIYSQAHWAKLDATAGGNLLREMGHALQETSEALYKQDPTGLRNEIAFFNKKLQKFSDCLLWRAQEERSLKLNKKSIQLIPLESTILKVNQQILDLGEPLALLLRKQTPIAEIVVDPTLLACLLLLNLWEISKSQQATDHIVTLTLAATTLQYGLATETAADLPSLTLPALAFCFSTDTSLPNLKPSYSIVGMNANVTLPASEAQFYQLESKQIVEAHGGYVEIIESPTKVSCLYVFPLDGRKVMRFKTYDPVDLLANTLAETEESLAQEQELIGLLTTQTTLSAERIQQTIAFIKNAHGLVRRKSGAPYYTHPMAVAKLLLKTTQDPDTILAGLLHDIVEDTPVTLHQLELMYGSEVAAVVDQVTHFNTNGYPWELDKLENKNILHQCRDIRVVQVKLADRLHNMSTLSARKPADQQRIAKETLAFYIPWGTKHHVPQRWLAEMQRICEEVLK
SIO_010081: DK880_RS01255
subclass of: SO_0000673
so part of: DK880_RS01255
location: 324639..328127
location: region:324639-328127:1
so has part: feature:324639-328127:1:exon

WP_109997033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324639-328127:1:exon

DK880_RS01260
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01260
old locus tag: DK880_00253
so part of: sequence
location: 328466..331945
location: region:328466-331945:1
so has part: feature:328466-331945:1:exon
subclass of: SO_0000010

position:328466:1
position: 328466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331945:1
position: 331945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328466-331945:1:exon

DK880_RS01260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01260
old locus tag: DK880_00253
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:solute symporter family protein
translation: MIQIDLLIIGLFLLITLIIGLYYGRGIKTFQDYAVGNKKMSTMVITLSLIATTYGGSILSSRPEGYYRSGLHALIMDLASPINFYIASRFILLRMKEFVNHFSIAESMGSMYGAVVRVVTAIFGIMITVSLLTVQVKVGQIVITSLLPSTIASDHATMALTMLSLLFIGYTTLGGSRSVAITDVYQFLLFGLCFPMLIPLFLYHAEDLGSGYQKLMRLPTFNPNSVFQWNDMLKGTLTYVFCRTIFPFDPARIQRFYMAASVYQAASVFNKAAIIRILLTLSFLSLAIALHIGHPIINPDCNVMNYIIGLTYFPGIRGLLITIIIALLMSTADSNLHAATVLFSNDIYAVIRKSKPSLVIIRITAASIGMLSIVVALHTTPQVTSFLYKMAGIYTSVVAVPFIIACIGFRPRPIVLLLNMALHTIIASYRIYVGYTGSQQLIFQSIMHSAFTLIAIHYVFPKRPYTGWTGIPDDSHWKLHNQMVKRWLLAQWQKWKYYFHKDYWESIFPRKENTFIWLGVYSIVNTLIVLCAIEQRYLWPYIYGYMAIMTLGTIIALYPALHAYQKGGTPLLHNLWPMLLFLLLFIAPLQFAKLGQYSPMVCALLIASISLSIVLVSVECSSMLLFCALLIHKFLPPYGIFIDLLWESLKHASVLELVLATAVIASTLVGFVQYKYLRYKSVSKGKVMDITRAYEQRISLEAIYSQAHWARLDATAGGTLLREMGHALQETLLPIARNDPHKVENEIIRFNKKLQKFSDCLAWRAQEERSLKLNKKAIQPIPLELTILKVNQQILDLGEPLALLLRKQTDVAEIAVDPALLECLLLLNLWAISKSQQATDHIVTLTLAATTLQYGLATETAADLPSLTLPALAFCFSTDTSLPNLKPSYSIVGMNANVTLPASEAQFYQLESKQIVEAHGGYVEIIESPTKVSCLYVFPLDGRKVMRFKTYDPVDLLANTLAETEESLAQEQELIGLLTTQTTLSAERIQQTIAFIKNAHGLVRRKSGAPYYTHPMAVAKLLLKTTQDPDTILAGLLHDIVEDTPVTLHQLELMYGSEVAAVVDQVTHYNTNGYPWEWDKLENKNILNQCRDIRVVQVKLADRLHNMRTLSARKPSDQQRIAKETLAFYIPWGTRHHVPQQWLAEIQRICEGIIAKQLT
SIO_010081: DK880_RS01260
subclass of: SO_0000673
so part of: DK880_RS01260
location: 328466..331945
location: region:328466-331945:1
so has part: feature:328466-331945:1:exon

WP_109997034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328466-331945:1:exon

DK880_RS01265
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01265
old locus tag: DK880_00254
so part of: sequence
location: 332151..333032
location: region:332151-333032:1
so has part: feature:332151-333032:1:exon
subclass of: SO_0000010

position:332151:1
position: 332151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333032:1
position: 333032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332151-333032:1:exon

DK880_RS01265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01265
old locus tag: DK880_00254
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVRHMDVMIVGLSLIGTLVIGIYYGRGIKTFQEYAVGNRKMSTSVIAISFLATVYGGKTLQASLDQSYREGFERLITQFIIIIVSLYLFSKFIIPRMQAFTKHLSIAESMGSLYGSAARITTALLSILLAIAYLTTQIKVGFEIMSILFPKLVPFQTYSTIFLTLLVIAYATFGGAKVVAITDVYQFLLFGLCFPILIFVLLFSTKDLATGWQKLTALPQYNLYKMCTGHTLTTLLTYFIFRHLLMLVPPYIQRFYIAVLSTIFLISISFHTKKMFRNFEGFSPMVYRKLRFL
SIO_010081: DK880_RS01265
subclass of: SO_0000673
so part of: DK880_RS01265
location: 332151..333032
location: region:332151-333032:1
so has part: feature:332151-333032:1:exon

WP_162534088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:332151-333032:1:exon

DK880_RS01275
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01275
old locus tag: DK880_00255
so part of: sequence
location: 333428..333943
location: region:333428-333943:1
so has part: feature:333428-333943:1:exon
subclass of: SO_0000010

position:333428:1
position: 333428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333943:1
position: 333943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333428-333943:1:exon

DK880_RS01275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01275
old locus tag: DK880_00255
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLVAISLGGCSRSHVGVKKDVKDQVESQYANQLDGQGADQSDVEDQVEGQCANQLDSQGAGQSGIEDQSVKKEEETQFIGAAMYHAVNLGGAFASWGMCLGANVVIDNFLKNRHHQIDDIAAPIFWGLMGGFIVGNLAGIALGVMKEIYKKRNNIEAVEYLNNTLELLSDY
SIO_010081: DK880_RS01275
subclass of: SO_0000673
so part of: DK880_RS01275
location: 333428..333943
location: region:333428-333943:1
so has part: feature:333428-333943:1:exon

WP_109997037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333428-333943:1:exon

DK880_RS01280
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01280
old locus tag: DK880_00257
so part of: sequence
location: 334773..338285
location: region:334773-338285:1
so has part: feature:334773-338285:1:exon
subclass of: SO_0000010

position:334773:1
position: 334773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338285:1
position: 338285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334773-338285:1:exon

DK880_RS01280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01280
old locus tag: DK880_00257
inference: COORDINATES: protein motif:HMM:NF024724.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:solute symporter family protein
translation: MIQIDLLIIGLFLLVTLIIGLYYGRGIKTFQDYAVGNRKVSTMVITLSMIATIYDGGILHSRLEAYYRQGVYALLLDLSSALNLYLASRFIISRMKEFIGHASIAESMGSLYGPIVRMVSGLLGIMMAIAILAAQVKIALNITQKLLPGIHTWPIHSTIVWVSLVILYASFGGARSVAITDVYQFLLFGLCFPLLIFICLFYTNPETLGWQKLIDIPSFNIRKVFTWNDTLANVLACFILRSMIIFDPARIQRFYMSFSITQAIKVFNQTAISRIIIPLLFLSVAIALHVGNYNIESGYNVLYYIIDFAHFPGVKGIFITVIFALLMSTADSNLHAASVLFANDVGPFLSKRTKHLGKQPSIKVVRVASILIGLISLVVALHTTHVMHLLIDAAHIYGTTVAIPFIMACLGFRPRLMVVLCSICINAAIAITYICYNSAQGSILTNLNPFEAIVLEGQKAFVFLMVSACILLALHYLLPKLPGTGWIGIPDSSAWDLQNQITKRWWLTRMQRFKMFCTRSYRISVFPTQERTFVAVGCYTIINAIIALCFIQRQYFLPYVYLYMAVMALGTILALYPALHAYQKGGTPLLHNLWPMLLFLLLFIAPLQFAKLGHYSPMVCALWVSNLGLGIVLLSLETSSILLAVALGIHQAIPPYTTCLALASWGLSIELVLASMLITAAIIGLGIYKYLRDKATAKLNIIELTRTYEQRISLEAIYSQAHWARLDATAGGTLLREMGHALQEISEVLYKQNPTGLRNEIVSFNKKLQKFSDCLAWRAQEERSLKLNKKSIQPTPLESTILIVNQQILDLGEPLALLLRKQTDVAEIAVDPALLECLLLLNLWAISKSQQATDHIVTLTLAATTLQYGLATETAADLPSLTLPALAFRFSTDTSLPNLKPSYRITAMNANSTLPASEAQFYQLESKQIVEAHGGYVEIIESPTQVNCLYVFPLDGRKVMRFKTYDPADLVANKIAETAESLAQEQELIGLLTAQTTLKEELIQQTIAFIKKAHGLVRRKSGSPYYTHPMAVAKLLLEATQDPDTILVGLLHDIVEDTPVTLSQLELMYGSEVAAVVDQVTHYNTNGYPWKLDKVANKNILHQCRDIRVVQVKLADRLHNMRTLFARKPSDQQRIAQETLTFYIPWGKNHKAPQQWLAEMQRICEGIIAS
SIO_010081: DK880_RS01280
subclass of: SO_0000673
so part of: DK880_RS01280
location: 334773..338285
location: region:334773-338285:1
so has part: feature:334773-338285:1:exon

WP_109997038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334773-338285:1:exon

DK880_RS01285
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01285
old locus tag: DK880_00258
so part of: sequence
location: 338516..341983
location: region:338516-341983:1
so has part: feature:338516-341983:1:exon
subclass of: SO_0000010

position:338516:1
position: 338516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341983:1
position: 341983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338516-341983:1:exon

DK880_RS01285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01285
old locus tag: DK880_00258
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:solute symporter family protein
translation: MLGHIDVMIIGLALMGTLVIGIYYGRGIKTFQDYAVGNRKMATSVLAISVIATIYGGGTLGVSLDQNYRQGFEILVMQSILVATILYLFSRLITPRMKEFMGHFSIAESMGSLYGSAARIITALLGIILAIAFLTTQIKIGFEIMSMLFPKIISFQTYSTIFLTLLVIAYSTFGGARAVAITDVYQFLLFGLCFPLLIFVLLFFTEDLAAGWKKLTALPQFNPNKMCTGRTLTTLLLHFIPRLLVLAIPAYIQRFYMASSVGQAAKVLNKIVIAPCVIALLMFGVAAALHIRGDSIPTNQNVFHHILSLTYFPGMLGILVTAMIALLMSTADSHLHIASVLFTHDLWPFIAGFTKSHNYSLKIVRIASMGIGMISLLMVCHTTNILQLMYKTYYFYWPTVSVPFILACLGFRPRSLAVLLVMGLNIIIAAYCIFYQKQSIAYDQIIVPMIVSAGSLFALHYLLPKRPHTGWVGIPDSSAWDLQNQITKRWWLTRMQRFKMFCTRSYRISVFPTQERTFVAVGCYTIINAIIALCFIQRQYFLPYVYLYMAMMALGTILALYPTLHAYQKGGTPLLHDLWPMLLLFLLFIAPIQFAKLGHYSPMVCALGVSSLGLGIVLLSLETGSILLAVALGIHQAIPPYTTCLALASWGLSIELVLASMLITAAIISLGIYKYLRDKATAKLNIIELTRTYEQRISLEAIYSQAHWARLDATAGGTLLREMGHTLQETLLPIARNDPHKVENEIIRFNKKLQKFSDCLAWRAQEERSLKLNKKAIQPIPLELTILKVNQQILDLGEPLALLLRKQTPIPEIVVDPTLLACLLLLNLWAISKSQQATDHIVTLTLAATTLQYSLATETAADLPSLTLPALAFCFSTDTSLPNLKPSYSIVGMNANVTLPASEAQFYQLESKQIVEAHGGYVEIIESPTKVSCLYVFPLDGRKVMRFKTYDPVDLLANTLAETEESLAQEQELIGLLTTQTTLSAERIQQTIAFIKNAHGLVRRKSGAPYYTHPMAVAKLLLEATQDPDTILAGLLHDIVEDTPVTLSQLELMYGAEVAAVVDQVTHFNTNGYPWELDKLENKNILHQCRDIRVVQVKLADRLHNMRTLSARKPSDQQRIAKETLAFYIPWGTKHHVPQQWLAEMQRICEEVLAS
SIO_010081: DK880_RS01285
subclass of: SO_0000673
so part of: DK880_RS01285
location: 338516..341983
location: region:338516-341983:1
so has part: feature:338516-341983:1:exon

WP_109997039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:338516-341983:1:exon

DK880_RS01290
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01290
old locus tag: DK880_00259
so part of: sequence
location: 342216..345692
location: region:342216-345692:1
so has part: feature:342216-345692:1:exon
subclass of: SO_0000010

position:342216:1
position: 342216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345692:1
position: 345692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342216-345692:1:exon

DK880_RS01290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01290
old locus tag: DK880_00259
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:solute symporter family protein
translation: MLGHIDVMIIGLALIGTLVIGIYYGRDIKTFQAYAVGNRKMSTSVVAISLIATIYGARILNEGLDDCYRQGFERFMKLSVLIAAILYLFSRLIMPRMKEFMGHLSIAESMGSLYGSAARIITSLLGIVVSIALLTVQIKVGLEIITLLFPKIVPFQTYSTILLTLLIMAYATFGGARAVAITDVYQFLLFGLCFPLLIFVLLFSTEDLAAGWQKLTAVPQFNPNKMCTGHTLTTLLSYFIYMSVLMLVPAYLQRFYMASSVGQAAKVLNKIAIIPCVIALLIFSVTAALHMHGDSIPSNQNVFHYILSLSYFPGMLGLLVTAIIALLMSTADSNLHVASVLFTHDLWPFITRVPKSRNGSLKIVRIVSTGIGMISLLLVFYTTSIFQLMCKVIYLYDPAVSVPFILACLGFRPRSFVVVIVMGLNILIATYFIFYQKQAVSHNHVILSMVVSAGSLFALHYLLPKRPHTGWIGIQDRSAWDLQNQITKRWWLTRMQRFKMFCTRSYRISVFPTQERTFVAVGCYTIINAIIALCFIQRQYFLPYVYLYMAMMALGTILALYPTLHAYQKGGTPLLHDLWPMLLLFLLFIAPIQFAKLGHYSPMVCALGVSNLGLGIVLLSLETSSILLAVALGIHQAIPPYTPCLALASWGLSIELVLASMLITAAIIGFGIYKYLRDKATAKLNIIELTRTYEQRISLEAIYSQAHWARLDATAGGNLLREMGHTLQETLLPIARNDPHKVENEIIRFNKKLQKFSDCLAWRAQEERSLKLNKKAIQPIPLELTILKVNQQILDLGEPLALLLRKQTDVAEIAVDPALLECLLLLNLWAISKSQQATDHIVTLTLAATTLQYGLTAETTADLPSLTLPALAFRFSTDTSLPNLKPSYRITAMNANSTLPASEAQFYQLESKQIVEAHGGYVEIIESPTQVNCLYVFPLDGRKVMRFKTYDPADLVANKIAETAESLAQEQELIGLLTAQTTLREELIQQTIAFIKKAHGLVRRKSGSPYYTHPMAVAKLLLEATQDPDTILVGLLHDIVEDTPVTLSQLELMYGSEVAAVVDQVTHFNTNGYPWELDKLENKNILHQCRDIRVVQVKLADRLHNMRTLSARKPSDQQRIAKETLAFYIPWGTKHHVPQQWLAEMQRICEGIIAKQLT
SIO_010081: DK880_RS01290
subclass of: SO_0000673
so part of: DK880_RS01290
location: 342216..345692
location: region:342216-345692:1
so has part: feature:342216-345692:1:exon

WP_109997040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:342216-345692:1:exon

DK880_RS01295
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01295
old locus tag: DK880_00260
so part of: sequence
location: 345899..349375
location: region:345899-349375:1
so has part: feature:345899-349375:1:exon
subclass of: SO_0000010

position:345899:1
position: 345899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349375:1
position: 349375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345899-349375:1:exon

DK880_RS01295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01295
old locus tag: DK880_00260
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:solute symporter family protein
translation: MVSHIDLMIIGLSLIGTLVIGIYYGRDIKTFQAYAVGNRKMSTSVVAISLIATWYGGATLQIRLDQSYRQGLKTYYIFFSFSLTAIMYLFSRFLTPRMKEFMGHFSIAESMGSLYGSAARIVTALLGILLAIAYLTTQIKVGFEIMSILFPKVVQLQTYSTILLILLVMAYATFGGARAVAVTDVYQFLLFGLCFPMLLFVLLFSTEDLATGWKKLTALPQFNLNKMCTGNTLTSLLPGFISRLLILVIPAYIQRFYMAASVEQATKVFSKVAIIPCVIALLIFSVTAALHIHGDNIPSNQNVLHYILSLAYFPGMLGILVTAMLALLMSTADSHLHIASVLFTHDLYPFIAGFTKSHNRSLKIIRIASICIGMISLLMVFHTTNILQLMYKTYYFYWPAVSIPFIIACLGFRPRSVVVLTAMGLSILIAGIIIFIKKQSVSHNHIILSMIVSAGSLFLLHYLFPKRSHTGWVGIPDSSAWDLQNQITKRWWLTRMQRFKMFCTRSYRISVFPTQERTFVAVGCYTIINAIIALCFIQRQYFLPYVYLYMAVMALGTILALYPALHAYQKGGTPLLHNLWPMLLFLLLFIAPLQFAKLGHYSPMVCALWVSNLGLGIVLLSLETSSILLAVALGIHQAIPPYTTCLALASWGLSIELVLASMLITAAIIGLGIYKYLRDKATAKLNIIELTRTYEQRISLEAIYSQAHWARLDATAGGTLLREMGHALQEISEVLYKQNPTGLRNEIVSFNKKLQKFSDCLAWRAQEERSLKLNKKSIQPTPLESTILIVNQQILDLGEPLALLLRKQTDVAEIAVDPALLECLLLLNLWAISKSQQATDHIVTLTLAATTLQYGLATETAADLPSLTLPALAFYFSTGTSLPNLKPSYRITAMNANTALPASEAQFYQLESNQIVEAHGGYVEIIESPTQVNCLYVFPLDGRKVMRFKTYDPADLVANKIAETAESLAQEQELIGLLTAQTTLREELIQQIIAFIKNAHGLVRRKSGSPYYTHLMAVAKLLLEATQDPDTILAGLLHDIVEDTPVTLPQLELMYGSEVATMVDQVTHYNTNGYPWKLDKVANKHILHQCRDIRVVQVKLADRLHNMRTLSARKPSDQQRIAQETLAFYIPWGKNHKAPQQWLAEMQRICEGIITKQL
SIO_010081: DK880_RS01295
subclass of: SO_0000673
so part of: DK880_RS01295
location: 345899..349375
location: region:345899-349375:1
so has part: feature:345899-349375:1:exon

WP_109997041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:345899-349375:1:exon

DK880_RS01300
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01300
old locus tag: DK880_00261
so part of: sequence
location: complement(349742..351052)
location: region:349742-351052:-1
so has part: feature:349742-351052:-1:exon
subclass of: SO_0000010

position:349742:-1
position: 349742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351052:-1
position: 351052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349742-351052:-1:exon

DK880_RS01300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01300
old locus tag: DK880_00261
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVVSKFPCFFKLFLGFCFAALYPSSFIVYAQQNSWPNCAHYFISFPRYENHKEPTDLVQNGCKWGTWVTFSNKIIAIEWKVGAWQNPEELFSSKDFLAIYKHPSYYQRAVIAYIAESFPTDKQKKIAIYAMRYTNDFYFFLKECFDLYKHKKLSKSLFETVLQLKFLHPIYNYIVSKANRDAHFRSLLQQISKEEALDASLRNTITQMLSGDLIKASQKHPKHTIFEAHRGPFDLKVIFQQMEKECQSYDIETPYDVSYIPYFLMILDHPCYYLYIGNATLLESHACPSSVEKYWAIFAMRQIGLSSTEQDMNNNTVQVYNLYSDLIRSACSAYRCCPKPTIPLYLMEDLLHARCPGYIFKYPFFILDYKSKELQDALDEFRSIPVLPCGLKEMAKKIQAGKLATPKEMAYMEGYRKFRATHFTLYETVLPCVSPQ
SIO_010081: DK880_RS01300
subclass of: SO_0000673
so part of: DK880_RS01300
location: complement(349742..351052)
location: region:349742-351052:-1
so has part: feature:349742-351052:-1:exon

WP_109997042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349742-351052:-1:exon

DK880_RS01305
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01305
old locus tag: DK880_00262
so part of: sequence
location: complement(351629..352135)
location: region:351629-352135:-1
so has part: feature:351629-352135:-1:exon
subclass of: SO_0000010

position:351629:-1
position: 351629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352135:-1
position: 352135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351629-352135:-1:exon

DK880_RS01305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01305
old locus tag: DK880_00262
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MITKTKNLAVLILSLSLIGCNIDRYNMGKKDDIANQAKSYKESIDWAQSVKKESTDGKFTFKEGEPKCNLFVYDVIYEAVGGAPHNGYHPHTAKKWASSDCIRNWQYMGTSETWQAGDVIAKEINYTNASGHCGIAVSSTEVVAAGISKVSQGVHGLNGATVRRYIGD
SIO_010081: DK880_RS01305
subclass of: SO_0000673
so part of: DK880_RS01305
location: complement(351629..352135)
location: region:351629-352135:-1
so has part: feature:351629-352135:-1:exon

WP_162534089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:351629-352135:-1:exon

DK880_RS01310
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01310
old locus tag: DK880_00263
so part of: sequence
location: 352444..352887
location: region:352444-352887:1
so has part: feature:352444-352887:1:exon
subclass of: SO_0000010

position:352444:1
position: 352444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352887:1
position: 352887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352444-352887:1:exon

DK880_RS01310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01310
old locus tag: DK880_00263
inference: COORDINATES: protein motif:HMM:NF024724.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MDYYTHSMEVAKLLLEATQDPDTILAGLLHDIVEDTSVTLPQIELMYGNEVTSIVDKITHYNTNGYPWKWDNAAAQNILDACSDILVIQVKLADRLHNMRTLFARKPSDQQRIAQETLAFYIPWGTKHHVPQQWLTEMQQICEKILK
SIO_010081: DK880_RS01310
subclass of: SO_0000673
so part of: DK880_RS01310
location: 352444..352887
location: region:352444-352887:1
so has part: feature:352444-352887:1:exon

WP_262494599.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352444-352887:1:exon

DK880_RS01315
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01315
old locus tag: DK880_00264
so part of: sequence
location: 353216..353899
location: region:353216-353899:1
so has part: feature:353216-353899:1:exon
subclass of: SO_0000010

position:353216:1
position: 353216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353899:1
position: 353899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353216-353899:1:exon

DK880_RS01315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01315
old locus tag: DK880_00264
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIQIDLLIIGLFLLITLIIGLYYDRGIKTFQDYAVGNKKMSTMVITLSLIATTYGGSILSSRPEGYYRSGLHALIMDLASPINFYIASRFILLRMKEFVNHFSIAESMGSMYGAVVRVVTAIFGIMITVSLLTVQVKVGQIVITSLLPSTIASDHATMALTMLSLLFIGYTTLGGSRSVAITDVYQFLLFGLCFPMLIPLFLYHAEDLGSGYQKLMRLPTFNPNSVF
SIO_010081: DK880_RS01315
subclass of: SO_0000673
so part of: DK880_RS01315
location: 353216..353899
location: region:353216-353899:1
so has part: feature:353216-353899:1:exon

WP_109997045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:353216-353899:1:exon

DK880_RS01320
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01320
old locus tag: DK880_00265
so part of: sequence
location: 353987..354688
location: region:353987-354688:1
so has part: feature:353987-354688:1:exon
subclass of: SO_0000010

position:353987:1
position: 353987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354688:1
position: 354688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353987-354688:1:exon

DK880_RS01320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01320
old locus tag: DK880_00265
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAASVYQAASVFNKAAIIRILLTLSFVSLAIALHIGHPIINPDCNVMNYIIGLTYFPGIRGLLITIIIALLMSTADSNLHAATVLFSNDIYAVIRKSKPSLVIIRITAASIGILSIVVALHTTPQVTPFLYKMAGIYTSVVAVPIIACIGFRPRPIVLLLNMALHTIIASYRIYVGYTGSQQLVFQSIMHSAFTLIAIHYVFPKRPYTGWTGIPDDSPWKLQNQMVKRWLLAQ
SIO_010081: DK880_RS01320
subclass of: SO_0000673
so part of: DK880_RS01320
location: 353987..354688
location: region:353987-354688:1
so has part: feature:353987-354688:1:exon

WP_204082278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:353987-354688:1:exon

DK880_RS01325
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01325
old locus tag: DK880_00266
so part of: sequence
location: 354800..356083
location: region:354800-356083:1
so has part: feature:354800-356083:1:exon
subclass of: SO_0000010

position:354800:1
position: 354800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356083:1
position: 356083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354800-356083:1:exon

DK880_RS01325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01325
old locus tag: DK880_00266
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MCAIEHRYLWPYIYGYMAIMTLGTIIALYPALHAYQKGGTLLLHNLWPMLLFLLLFIAPLQFAKLGHYSPMVCALLIASISLSIVLVSVECSSMLLFCALLIHKFLPPYVNFVDLFWGNLKHASVLELVLAVMLVTAAVVGFVQYKYLRDKAVSKSKVMDITRAYEQRIALEAIYSQAHWARLDATAGGNLLREMGDTLQEILCPIARNDPHIVENEIIRFNKKLHKFSDCLAWSAQEERSLKLNKKSIQLIPFESTISKVNQQILDLGEPLALFLRKQTPIAEIIVDPALLDCLLLLNLWAISKSQHATDHIVTLTLAATTLQYGLATETAADLPSLTLPALAFCFSTDTSLPNLKSSYSVSQVVTFTALPAGEAQFYQLESKQIVEAHGGYVEIIESPTKVSCLYVFPLDGRKVMRFKTYDPAQK
SIO_010081: DK880_RS01325
subclass of: SO_0000673
so part of: DK880_RS01325
location: 354800..356083
location: region:354800-356083:1
so has part: feature:354800-356083:1:exon

WP_204082279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354800-356083:1:exon

DK880_RS01330
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01330
old locus tag: DK880_00267
so part of: sequence
location: 356100..356585
location: region:356100-356585:1
so has part: feature:356100-356585:1:exon
subclass of: SO_0000010

position:356100:1
position: 356100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356585:1
position: 356585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356100-356585:1:exon

DK880_RS01330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01330
old locus tag: DK880_00267
inference: COORDINATES: protein motif:HMM:NF012936.2
GO function: GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006529 - asparagine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: asparagine synthase-related protein
translation: MYNLWQEDRLAACVGLENRVPFLNDLVLKVILGIPRSLHAKLFWNKYILRNAFKKELGHSVAHRPKVALFYGQGQNNTIKMMLRLMSMHNFALVDLAYPNSHANSWLNKAHLKKAIQQLMMHPPYKGWEKVLRLINIGILEQMHCGLKRNYKKINYRMMHG
SIO_010081: DK880_RS01330
subclass of: SO_0000673
so part of: DK880_RS01330
location: 356100..356585
location: region:356100-356585:1
so has part: feature:356100-356585:1:exon

WP_162534091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:356100-356585:1:exon

DK880_RS01335
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01335
old locus tag: DK880_00268
so part of: sequence
location: 356649..357623
location: region:356649-357623:1
so has part: feature:356649-357623:1:exon
subclass of: SO_0000010

position:356649:1
position: 356649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357623:1
position: 357623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356649-357623:1:exon

DK880_RS01335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01335
old locus tag: DK880_00268
inference: COORDINATES: protein motif:HMM:NF019619.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cupin domain-containing protein
translation: MMRTVTIDKYFEKIAQHIVCNATLSNQHLHIKFPKETFASEIADFNLFTSLPELLNLYKGVVMVVGKVAIDETEGLRDRFFVPMYRALAYYQQGATLEFDFVERFFNGLQKFIVKFQTFLQLPTGVLGKAICYASPNASGFPLHFDAYYNFIFQIIGKKKWILQYNTNADLPLQHYDFHEYPYLPTELEMYWKKDTKLPLGDTDNLIIEELEAGSMLYLPRGLWHQTEASDSSFSLNITFSLPSVIDLLLAALRKKMVPYTIARNTPLKINKEDYKCYANLLEAAQNDLQLSDLIAQLGVKHDAYQQGNKTFHAMLECLQTKFS
SIO_010081: DK880_RS01335
subclass of: SO_0000673
so part of: DK880_RS01335
location: 356649..357623
location: region:356649-357623:1
so has part: feature:356649-357623:1:exon

WP_109997049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:356649-357623:1:exon

DK880_RS01340
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01340
old locus tag: DK880_00269
so part of: sequence
location: 357639..358820
location: region:357639-358820:1
so has part: feature:357639-358820:1:exon
subclass of: SO_0000010

position:357639:1
position: 357639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358820:1
position: 358820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357639-358820:1:exon

DK880_RS01340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01340
old locus tag: DK880_00269
inference: COORDINATES: protein motif:HMM:NF019310.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MLPAAFHIYALFRGLSLGLYIPVSLTFLNDHHCPSLHIGLLGTCFELIKFITAIPIGRWADCCGPRGPLMLSGLIGGLLWLLFFLGDHTLYVYYSCTALLGIAEACMSGSLESWITNCVTKSTVTATILRNTSIMMITSIIAGFLSIPLYQYSPLYCCLLLSLANFAKAIIPLLSSSVVCISKNYTHALTFSTALLEGVCMVYQTRKLRVVICSIFFVTMACDMALRYYELYLRQRGFAMTYTGYVTGSAGILALLMLLLVTRYKQILRYRPFWIIVGIDIIGAIICYLLAFSTLSTVVYISLTILLGLEDIRSPIVKALLAETIYDAQHKALIFSLFVLVESAGEILAGTLFGYIIAGYGLQVGFSISILLFLFSACIYVIDYMVYRLKNTF
SIO_010081: DK880_RS01340
subclass of: SO_0000673
so part of: DK880_RS01340
location: 357639..358820
location: region:357639-358820:1
so has part: feature:357639-358820:1:exon

WP_109997050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357639-358820:1:exon

DK880_RS01345
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01345
old locus tag: DK880_00270
so part of: sequence
location: complement(359330..359716)
location: region:359330-359716:-1
so has part: feature:359330-359716:-1:exon
subclass of: SO_0000010

position:359330:-1
position: 359330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359716:-1
position: 359716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359330-359716:-1:exon

DK880_RS01345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01345
old locus tag: DK880_00270
inference: COORDINATES: protein motif:HMM:NF024724.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MLAGLLHDVVEDTPVTLHQVELMHGAEVATLVDQVTHYNTNGYPWKLDKEEKKNRLNQCDDVRAVQIKLADRLHNMRTLSIHKWKDQQRIAQETLLFYVPWGEKHNITKEWITEMKQICEKILSNTRG
SIO_010081: DK880_RS01345
subclass of: SO_0000673
so part of: DK880_RS01345
location: complement(359330..359716)
location: region:359330-359716:-1
so has part: feature:359330-359716:-1:exon

WP_162534092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:359330-359716:-1:exon

DK880_RS05115
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05115
so part of: sequence
location: complement(359719..359886)
location: region:359719-359886:-1
so has part: feature:359719-359886:-1:exon
subclass of: SO_0000010

position:359719:-1
position: 359719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359886:-1
position: 359886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359719-359886:-1:exon

DK880_RS05115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05115
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIALLANSTTLTKEKIIPVIAFIKNAHGLVMRQSGEPYYTHPIAVAKLIANSYHL
SIO_010081: DK880_RS05115
subclass of: SO_0000673
so part of: DK880_RS05115
location: complement(359719..359886)
location: region:359719-359886:-1
so has part: feature:359719-359886:-1:exon

WP_162534093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:359719-359886:-1:exon

DK880_RS01350
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: dnaX
locus tag: DK880_RS01350
old locus tag: DK880_00271
so part of: sequence
location: 359896..361491
location: region:359896-361491:1
so has part: feature:359896-361491:1:exon
subclass of: SO_0000010

position:359896:1
position: 359896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361491:1
position: 361491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359896-361491:1:exon

DK880_RS01350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: dnaX
locus tag: DK880_RS01350
old locus tag: DK880_00271
EC number: 2.7.7.7
inference: COORDINATES: protein motif:HMM:TIGR02397.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit gamma/tau
translation: MCDAISRFSLLINCLHITEEVEPCNHCRHCINFADSSPMNIYELDAASNNAVEDIRALVDQVRYVPQMGKYKIYIIDEVHMLSNAAFNAFLKTLEEPPNYVLFILATTERHKVLPTILSRCQIFNFNSIKIDNIVDQLKLIAKQESIAYEVAALQLIAQKAEGAMRDALSMFDIIATAIGQSGTITYNEASAHLQHLDYAYYFRCTESFLKQDIPALLSIYDAILRAGFNGRHFLAGLGEHLRNLLVCKDQVSLPLLEVPDPIRPQYAEYAVKCSMRFLLDALARLNQYILNYQASQHKRLHVELFLIELATVVEATDAAVVLDKSGSIKKKIVPPPKPNTCIQPPSVDNGIACHIQPKSQNNRSLPGNKVIIQAAVTEQLPTLADLKKTLTETEALITAKQASTVKAEVAFPPVKQKVEAALTYYKEQLKKKGMIADYQLISQPIKVQDRVVSITLINPVQEAMLQNLKEDLLAFLRKTLHCSDIIIQGILVEEIASKRPYTDQEKLSYLSKKNAFIALLQEKLMLELAY
SIO_010081: DK880_RS01350
subclass of: SO_0000673
so part of: DK880_RS01350
location: 359896..361491
location: region:359896-361491:1
so has part: feature:359896-361491:1:exon

WP_162534094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:359896-361491:1:exon

DK880_RS01360
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01360
old locus tag: DK880_00272
so part of: sequence
location: 361879..362130
location: region:361879-362130:1
so has part: feature:361879-362130:1:exon
subclass of: SO_0000010

position:361879:1
position: 361879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362130:1
position: 362130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361879-362130:1:exon

DK880_RS01360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01360
old locus tag: DK880_00272
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLYNVGITPPLTSDGKWPITANMWTGSVSGWTKASTQQKGDIVSDGNHCGIAVDSTYTMAAGTNKIYMDQDIKGGTIQRCDTD
SIO_010081: DK880_RS01360
subclass of: SO_0000673
so part of: DK880_RS01360
location: 361879..362130
location: region:361879-362130:1
so has part: feature:361879-362130:1:exon

WP_109997053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361879-362130:1:exon

DK880_RS01365
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01365
old locus tag: DK880_00273
so part of: sequence
location: 362352..363593
location: region:362352-363593:1
so has part: feature:362352-363593:1:exon
subclass of: SO_0000010

position:362352:1
position: 362352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363593:1
position: 363593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362352-363593:1:exon

DK880_RS01365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01365
old locus tag: DK880_00273
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHNAHDRGYVDWPSWAIYLYRHPGYKPYQPFTDIKKYGCNWGNWVTFPQKIEAIQARVGYMHNPSALFRSKDFLVIYKHPAYYKQAFLDYLVDKRYTLEQKKIAIYATVRLGSFLCWETYYQLYKKKEIGLSLLELLLAINLSYRFVNPPEKLMKEECVCLERIQNNIPKGSSLYNAIKSILDHQFPKSWYRHRMFCDNQDASHGYYVAPFPFYDMLTDAVRDKKYWQNWHITADSPVGLETYPYFLVVIEHPQYYYPAHFGPFSSAQDGIAILRDKGYTDEEKSMAIFGMSQLGVSSSYESSFYYAWMIEHVIEWYKQGHISVHHLFQLFVCDFPTFYKYPFFIIDYKEAAIQVALNKFIAAPTIPEGLKEIARKVKNGTLATREEMAYMEGYRTFRKTYFTLYETIFPRDA
SIO_010081: DK880_RS01365
subclass of: SO_0000673
so part of: DK880_RS01365
location: 362352..363593
location: region:362352-363593:1
so has part: feature:362352-363593:1:exon

WP_109997054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362352-363593:1:exon

DK880_RS01370
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01370
old locus tag: DK880_00274
so part of: sequence
location: 363677..363859
location: region:363677-363859:1
so has part: feature:363677-363859:1:exon
subclass of: SO_0000010

position:363677:1
position: 363677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363859:1
position: 363859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363677-363859:1:exon

DK880_RS01370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01370
old locus tag: DK880_00274
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDLCRNRIGYEDAKALAKVLTGNRAVTYLNLNANGIGNIAALGVALYKLLKDNQSIKNID
SIO_010081: DK880_RS01370
subclass of: SO_0000673
so part of: DK880_RS01370
location: 363677..363859
location: region:363677-363859:1
so has part: feature:363677-363859:1:exon

WP_109997055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363677-363859:1:exon

DK880_RS01375
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01375
old locus tag: DK880_00275
so part of: sequence
location: complement(364044..365465)
location: region:364044-365465:-1
so has part: feature:364044-365465:-1:exon
subclass of: SO_0000010

position:364044:-1
position: 364044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365465:-1
position: 365465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364044-365465:-1:exon

DK880_RS01375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01375
old locus tag: DK880_00275
EC number: 2.1.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934738.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine hydroxymethyltransferase
translation: MPALVFWFTTDTMLPQTLPVYSIAEPRVTAAPLTEKHLYQIECRQTVEAHGGYVAIQETADAIQALYVLPIEGQKVIRFKNYDPVYLAYAEGLPGKRYYGGCHIIDEIELLAIERAKNLFKVEWANVQPHSGSQANAALLMAVLKPGDKILGFNLAHGGHLTHGSPVNFSGKLYQASFYGVNPETGYIDLDSVAQKARSEKPAIIICGASAYSRDWDYLQLRTIADEIAAFLWADISHPAGLISQGLLNNPFPYCHFVTTTTHKTLRGPRGGLLLMGKDFDNPLGKTNKSGQLHKMSALLDAAVFPGIQGGPLEHGIAAKAIAFYEAMTYGFTCYAKQVQKNAQAMAQAFLDAGYHILSGGTDNHLLVLDLSKQNITGKEAEAALEKADIITNRNLVPFDKNTPQVTSGIRLGTAAVTTRGLKEKDMPLIVEWIDYLLKNKDKDSQIKEVKQIVNAYMCRFPLTTSDYPFIAS
SIO_010081: DK880_RS01375
subclass of: SO_0000673
so part of: DK880_RS01375
location: complement(364044..365465)
location: region:364044-365465:-1
so has part: feature:364044-365465:-1:exon

WP_239302531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:364044-365465:-1:exon

DK880_RS01380
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01380
old locus tag: DK880_00276
so part of: sequence
location: complement(365481..365900)
location: region:365481-365900:-1
so has part: feature:365481-365900:-1:exon
subclass of: SO_0000010

position:365481:-1
position: 365481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365900:-1
position: 365900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365481-365900:-1:exon

DK880_RS01380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01380
old locus tag: DK880_00276
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSHALEESYHYLATHGQEKLSKNISNFLNKLHKFGKLHLWKAQLGHGIELNQNKIKRIAWEDCLLTVHDHIRTLDTDIQLLLHKQTNRTQLWVYPELFECFLMLNLWEMSQCAQTVEHTVTATIADSLLQYNYDRDTPA
SIO_010081: DK880_RS01380
subclass of: SO_0000673
so part of: DK880_RS01380
location: complement(365481..365900)
location: region:365481-365900:-1
so has part: feature:365481-365900:-1:exon

WP_109997056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:365481-365900:-1:exon

DK880_RS01385
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01385
pseudo: true
so part of: sequence
location: 366170..>366452
location: region:366170-366452:1
so has part: feature:366170-366452:1:exon
subclass of: SO_0000010

position:366170:1
position: 366170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366452:1
position: 366452
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366170-366452:1:exon

DK880_RS01385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612390.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: DK880_RS01385
subclass of: SO_0000673
so part of: DK880_RS01385
location: 366170..>366452
location: region:366170-366452:1
so has part: feature:366170-366452:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:366170-366452:1:exon

DK880_RS01390
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01390
old locus tag: DK880_00278
so part of: sequence
location: 366488..367402
location: region:366488-367402:1
so has part: feature:366488-367402:1:exon
subclass of: SO_0000010

position:366488:1
position: 366488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367402:1
position: 367402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366488-367402:1:exon

DK880_RS01390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01390
old locus tag: DK880_00278
inference: COORDINATES: protein motif:HMM:NF024724.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MQYGSAAETAADLPSLTLPALAFCFSTDTSLPNLKPSYRITAMNANITLPASEAQFYQLESKQIVEAHGGYVEIIESPTQVNCLYVFPLDGRNVMRFKTYNPADMIANTIAETAESLAQEQELIGLLTTQTTLSAERIQQTIAFIKNAHGLVRRKSGAPYYTHPMAVAKLLLEVTQDPDTILAGLLHDIVENTPITLHQLELMYGSAIAAVVDQVTHYNTNGYPWELDKLENKNILNQCKDTRVVQVKLADRLHNMRTLSARKPSDQQRIAQETLAFYIPWGTKHHVPQQWLTEMQRICGQFLV
SIO_010081: DK880_RS01390
subclass of: SO_0000673
so part of: DK880_RS01390
location: 366488..367402
location: region:366488-367402:1
so has part: feature:366488-367402:1:exon

WP_162534095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:366488-367402:1:exon

DK880_RS05380
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05380
old locus tag: DK880_00279
so part of: sequence
location: 368042..368407
location: region:368042-368407:1
so has part: feature:368042-368407:1:exon
subclass of: SO_0000010

position:368042:1
position: 368042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368407:1
position: 368407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368042-368407:1:exon

DK880_RS05380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05380
old locus tag: DK880_00279
inference: COORDINATES: protein motif:HMM:NF016629.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MKVEKESFVEEDLKQKFSDLVFSIKMQNNEEAFIYTLIEAEGSPKYWTAYKLWKYIFLLLEIHKTKKRSKLPLIIPIVVYHGNRRFNAPRNLWDLFSHPSLAQSLMGGDYQLVDLYAMSDE
SIO_010081: DK880_RS05380
subclass of: SO_0000673
so part of: DK880_RS05380
location: 368042..368407
location: region:368042-368407:1
so has part: feature:368042-368407:1:exon

WP_204082293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:368042-368407:1:exon

DK880_RS05385
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05385
old locus tag: DK880_00280
so part of: sequence
location: 368447..368932
location: region:368447-368932:1
so has part: feature:368447-368932:1:exon
subclass of: SO_0000010

position:368447:1
position: 368447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368932:1
position: 368932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368447-368932:1:exon

DK880_RS05385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05385
old locus tag: DK880_00280
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKYIYSRDMIKLWEEFLETFKSCILLDKEKGYIYVRNFLWYSDSKLPEDKQPVLENIITKYLPREDKENIMRTIAQKYRDEGIQIGQEKGIQIGQEKGIQIGQEKGIQIGQEKGIQIGQEKGKIEIAKAMLLKGYPMEDIVLLTGLSSSHIQDLVMEKASN
SIO_010081: DK880_RS05385
subclass of: SO_0000673
so part of: DK880_RS05385
location: 368447..368932
location: region:368447-368932:1
so has part: feature:368447-368932:1:exon

WP_204082280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:368447-368932:1:exon

DK880_RS05390
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05390
old locus tag: DK880_00281
so part of: sequence
location: complement(369140..369331)
location: region:369140-369331:-1
so has part: feature:369140-369331:-1:exon
subclass of: SO_0000010

position:369140:-1
position: 369140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369331:-1
position: 369331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369140-369331:-1:exon

DK880_RS05390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05390
old locus tag: DK880_00281
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MRYRNSIYNTYVGERGVKLSGGQRQRVAIACAILKDAPILILDEATSALDSQTENLIQDSLHY
SIO_010081: DK880_RS05390
subclass of: SO_0000673
so part of: DK880_RS05390
location: complement(369140..369331)
location: region:369140-369331:-1
so has part: feature:369140-369331:-1:exon

WP_109997058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:369140-369331:-1:exon

DK880_RS05395
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05395
so part of: sequence
location: complement(369306..369476)
location: region:369306-369476:-1
so has part: feature:369306-369476:-1:exon
subclass of: SO_0000010

position:369306:-1
position: 369306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369476:-1
position: 369476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369306-369476:-1:exon

DK880_RS05395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05395
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSQITVIPQDISLFHRTLMENIRYGHLDATDKEVVEASKKAHMHNFISALPEQYI
SIO_010081: DK880_RS05395
subclass of: SO_0000673
so part of: DK880_RS05395
location: complement(369306..369476)
location: region:369306-369476:-1
so has part: feature:369306-369476:-1:exon

WP_204082281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:369306-369476:-1:exon

DK880_RS01410
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01410
old locus tag: DK880_00282
so part of: sequence
location: complement(369853..371013)
location: region:369853-371013:-1
so has part: feature:369853-371013:-1:exon
subclass of: SO_0000010

position:369853:-1
position: 369853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371013:-1
position: 371013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369853-371013:-1:exon

DK880_RS01410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01410
old locus tag: DK880_00282
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQFPNYEGYQPPQDILKEGCPWGNWVTFPQKIVAIEAKVSPWKDPIELFKSKDFEAMYHYPDYYQEAVLDYLANPDYNDNQKKICVYAMRHISDIIDLLGEIYYLYQAKKLSTSVFEILVKQVFIVTEPHKWVNKRKNKLLDLLQAIVDMPVTTVSLKKVIKRALSGLYPDDCPYKDNFPKSYNQYAGISFPQKICDAIQQEYIEYDPYYIPQDVSQSSSYIPEFLILVDHPSHYLMSGNYYIFDQPKCQSKVARFWAIVMMHQLGAFQGDILKYDVLINSACNYYYFSPDSTKGMSLLLMESLFLRKGLSCFKYPFFILNQEDKDLQRALHRFIALPTIPCGLKEIAKKILAGTLATPQEMEYMKGYIAFRKKYFTLYETVLPSQ
SIO_010081: DK880_RS01410
subclass of: SO_0000673
so part of: DK880_RS01410
location: complement(369853..371013)
location: region:369853-371013:-1
so has part: feature:369853-371013:-1:exon

WP_162534096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:369853-371013:-1:exon

DK880_RS01415
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01415
old locus tag: DK880_00283
so part of: sequence
location: complement(371206..372003)
location: region:371206-372003:-1
so has part: feature:371206-372003:-1:exon
subclass of: SO_0000010

position:371206:-1
position: 371206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372003:-1
position: 372003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371206-372003:-1:exon

DK880_RS01415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01415
old locus tag: DK880_00283
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGSEPGPSTNRTYTNTYDFEESAENRSALQKEVERSIIDLIQGGYSCNDPEAGGIIVERLRNDSAVVTTILERLYAKRRAVGRTPSKEEIREVMGACILDMARVEKEILDQRADGSARARAAIAEEAKRLSITCREEYAHNVAKTSTYKDENGKDKKMYFEIGTPKCNLFVFDVLNGAGITAPLNWSGKWPFTASDWHGTANGRFDILDSSTPMQFGDIVATTRHCGIAVDSTYVIAAGVQKVTLDTREKQSLKEGSSIRRYNQS
SIO_010081: DK880_RS01415
subclass of: SO_0000673
so part of: DK880_RS01415
location: complement(371206..372003)
location: region:371206-372003:-1
so has part: feature:371206-372003:-1:exon

WP_204082282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371206-372003:-1:exon

DK880_RS01420
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01420
old locus tag: DK880_00284
so part of: sequence
location: 373455..376940
location: region:373455-376940:1
so has part: feature:373455-376940:1:exon
subclass of: SO_0000010

position:373455:1
position: 373455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376940:1
position: 376940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373455-376940:1:exon

DK880_RS01420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01420
old locus tag: DK880_00284
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:solute symporter family protein
translation: MVGHIDVMIIGFSLIGTLVIGIYYGRGIKTFQDYAVGNRKMATSVIAISVIATIYGGGTLHAGLDGCYRKGFEILITQSILVAIIGYLFSRFITPRMKEFMGHLSIAESMGSVYGSTARIITAVLGIILTMAFLATQIKVGLEITAILFPKVAQLQSYSTILLILLVMAYATFGGARAVAITDVYQFLLFGLCFPMLIFVLLFSTKDLAAGWQKLTAIPHFNLNKMCTGHTLTTVLHSSGFLFRLLIVVTPSYLQRFYMASSVGQATKVFNKVAIMPSVIALLMFCVTAALHIRGNSIPTNQHVLHYILSLDYFPGMLGILVTAMLALLMSTADSQLHIASVLFTHDLWPFIARFTKSRNGSLKIVRIVSIGIGMISLLMVFDTTTTIQQLIWPTFYFYWTAVSVPFMLACFGFRPRSVAVLAIMGLSILMAVYIIFYQKQAVSHNHVILSMVVSAGSLFALHYLLPKRPHTGWIGIQDRSAWDLQNQITKRWWLTRMQRFKMFCTRSYRISVFPTQERTFVAVGCYTIINAIIALCFIQRQYFLPYVYLYMAVMALGTILALYPALHAYQKGGTPLLHNLWPMLLFFLLFMAPFQFAKLGHYSPVVCALFIANIGLSTVLVSVECSSMLLLCALAIHKFLPPYINFVDLFWESLRHASVLELVLAVMLVTAAVVGFVQYKYLRDKAVSKGKTMEITRSYEQRIALEAIYSQAHWARLDATAGGTLLRAMGDTLQETLFPIARNDPHKVENEITRFNKKLQKFSNCLLWRAQEERSLKLNKKAIQPIPLESTILKVNQQILDLGEPLALLLRKQTDVAEIVVDPALLECLLLLNLSAISKSQQATDHIVTLTLSAATLQYGSAAETAADLPSLTLPALAFCFSTDTSLPNLKPSYRITAMNANITLPASEAQFYQLESKQIVEAHGGYVEIIESPTQVNCLYVFPLDGRNVMRFKTYNPADMIANTIAETAESLAQEQELIGLLTTQTTLSAERIQQTIAFIKNAHGLVRRKSGAPYYTHPMAVAKLLLEATQDPDTILAGLLHDIVEDTPVTLHQLELMYGSAIAAVVDQVTHYNTNGYPWELDKLENKNILNQCKDTRVVQVKLADRLHNMRTLSARKPSDQQRIAQETLAFYIPWGTKHHVPQQWLTEMQRICGQFLV
SIO_010081: DK880_RS01420
subclass of: SO_0000673
so part of: DK880_RS01420
location: 373455..376940
location: region:373455-376940:1
so has part: feature:373455-376940:1:exon

WP_109997061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373455-376940:1:exon

DK880_RS05400
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05400
old locus tag: DK880_00285
so part of: sequence
location: 377580..377945
location: region:377580-377945:1
so has part: feature:377580-377945:1:exon
subclass of: SO_0000010

position:377580:1
position: 377580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377945:1
position: 377945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377580-377945:1:exon

DK880_RS05400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05400
old locus tag: DK880_00285
inference: COORDINATES: protein motif:HMM:NF016629.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MKVEKESFVEEDLKQKFSDLVFSIKMQNNEEAFIYTLIEAEGSPKYWTAYKLWKYIFLLLEIHKTKKRSKLPLIIPIVVYHGNRRFNAPRNLWDLFSHPSLAQSLMGGDYQLVDLYAMSDE
SIO_010081: DK880_RS05400
subclass of: SO_0000673
so part of: DK880_RS05400
location: 377580..377945
location: region:377580-377945:1
so has part: feature:377580-377945:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:377580-377945:1:exon

DK880_RS05405
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05405
old locus tag: DK880_00286
so part of: sequence
location: 377985..378422
location: region:377985-378422:1
so has part: feature:377985-378422:1:exon
subclass of: SO_0000010

position:377985:1
position: 377985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378422:1
position: 378422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377985-378422:1:exon

DK880_RS05405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05405
old locus tag: DK880_00286
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKYIYSRDMIKLWEEFLETFKSCILLDKEKGYIYVRNFLWYSDSKLPEDKQPVLENIITKYLPREDKENIMRTIAQKYRDEGIQIGQEKGIQIGQEKGIQIGQEKGKIEIAKAMLLKGYPMEDIVLLTGLSSSHIQDLVMEKASN
SIO_010081: DK880_RS05405
subclass of: SO_0000673
so part of: DK880_RS05405
location: 377985..378422
location: region:377985-378422:1
so has part: feature:377985-378422:1:exon

WP_204082283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:377985-378422:1:exon

DK880_RS05410
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05410
old locus tag: DK880_00287
so part of: sequence
location: complement(378630..378821)
location: region:378630-378821:-1
so has part: feature:378630-378821:-1:exon
subclass of: SO_0000010

position:378630:-1
position: 378630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378821:-1
position: 378821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378630-378821:-1:exon

DK880_RS05410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05410
old locus tag: DK880_00287
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MRYRNSIYNTYVGERGVKLSGGQRQRVAIACAILKDAPILILDEATSALDSQTENLIQDSLHY
SIO_010081: DK880_RS05410
subclass of: SO_0000673
so part of: DK880_RS05410
location: complement(378630..378821)
location: region:378630-378821:-1
so has part: feature:378630-378821:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:378630-378821:-1:exon

DK880_RS05415
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05415
so part of: sequence
location: complement(378796..378966)
location: region:378796-378966:-1
so has part: feature:378796-378966:-1:exon
subclass of: SO_0000010

position:378796:-1
position: 378796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378966:-1
position: 378966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378796-378966:-1:exon

DK880_RS05415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05415
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSQITVIPQDISLFHRTLMENIRYGHLDATDKEVVEASKKAHMHNFISALPEQYI
SIO_010081: DK880_RS05415
subclass of: SO_0000673
so part of: DK880_RS05415
location: complement(378796..378966)
location: region:378796-378966:-1
so has part: feature:378796-378966:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:378796-378966:-1:exon

DK880_RS05130
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05130
so part of: sequence
location: complement(379138..379311)
location: region:379138-379311:-1
so has part: feature:379138-379311:-1:exon
subclass of: SO_0000010

position:379138:-1
position: 379138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379311:-1
position: 379311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379138-379311:-1:exon

DK880_RS05130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05130
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFGILLIASEEIWHITVSLQDFSHVIGNLKSGLSILWPCEKSVDVINPKTLQIKHPS
SIO_010081: DK880_RS05130
subclass of: SO_0000673
so part of: DK880_RS05130
location: complement(379138..379311)
location: region:379138-379311:-1
so has part: feature:379138-379311:-1:exon

WP_204082284.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379138-379311:-1:exon

DK880_RS01435
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01435
old locus tag: DK880_00288
so part of: sequence
location: 379593..381929
location: region:379593-381929:1
so has part: feature:379593-381929:1:exon
subclass of: SO_0000010

position:379593:1
position: 379593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381929:1
position: 381929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379593-381929:1:exon

DK880_RS01435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01435
old locus tag: DK880_00288
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF024831.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MKILKVIHGYPPYYSAGSEVYSQTLVHELANEHEVQLLSRYENSFLPDFHYRTLLDPSDARVLLHLINVPTAKYHYNFINEPVNALFKSILATFQPDLIHFGHLSHLSMELPNIAVQAGIPTIFTLHDFWLMCPRGRFIQRNATSLFPLCNGQADQKCATQCYKGYFTGDSTQLAADITYWATWVGVRMEQARKIIKGIDHFIAPSRFLQRKFIQDFHLPAHKVSYLDYGFDLSRFTERQRIPEALFVFGYIGTHTPEKGIDLLLRAFAKLSVRAQLNIWGASREETAALKAIVQQFPSAIQERIKWMGPYANEAITAAVFDRVDAIVVPSIWGENAPLVIHEAQQLRVPVLTADYGGMAEYVKDGINGLLFKHRNVTSLAAAMQRLATDPVLYGQLMQTGYLYSADGNIPSIQEHVNQLQPIYHAAINSKGKTVATKQGPWRITFDTNPDHCNFACIMCEGFSPYSKVKATRKAQGIRARVMPIETLRKVIQEAAGTALREIIPSTMGEPLLYKHFTEIIALCHEFGLKLNLTTNGSFPIKGAQQWAELLVPVLSDIKISWNGATKETHEAIMSGSKWEEVVTNLQTFLQVRDAYFQSTGKRCSVTLQLTFLESNLTELYALVKMAITMGIDRVKGHHLWAHFKEIKGLSMRRNHAAIDQWNKVVQQLYLLRDQLLLPNGTQIKLVNFTLLPKEGIKDLAVGGPCPFLGKEAWISPEGKFSPCCAPDALRETLGNFGNIHEVKLEDIWKSDAYTHLQKNYLKHPLCKGCNMRKPLVS
SIO_010081: DK880_RS01435
subclass of: SO_0000673
so part of: DK880_RS01435
location: 379593..381929
location: region:379593-381929:1
so has part: feature:379593-381929:1:exon

WP_109997062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379593-381929:1:exon

DK880_RS01440
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01440
old locus tag: DK880_00289
so part of: sequence
location: 381952..383616
location: region:381952-383616:1
so has part: feature:381952-383616:1:exon
subclass of: SO_0000010

position:381952:1
position: 381952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383616:1
position: 383616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381952-383616:1:exon

DK880_RS01440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01440
old locus tag: DK880_00289
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: WG repeat-containing protein
translation: MPTVSLPAIVLSSCGRFHQLLGKPLYGARFIRVEKFHAPGLAPAYDASGAYHIDTTGKAAYHKRFLQIHGFYNHRAAVQDETGFYHIDSEGSSIYAARYQWVGNFQEEKCVVNNADGFFHIDLKGARIYPEIYDYVGDFKEGAAVVYKNGQATHINQEGKWLHAKWYKRLHVFHKGYAIAEDAKGWFHIDRRGKALYPQRFKRVEPFYNGRAKVETWEGALGQLDSSGSMQVFIAGPNQFDQVHAISAELAAFWKTYLMHTAVTLGLCHSLPCTTTDLAQQLNIAEENIERLLRAMWEIGWVTYEPSKTIWQLATKGSCFKNIPFLAKAATLWAQVAAAANWLKLPDLLRQPCIASFPSFKEKERSSKKRRQYYEALLGYAAWDFQALHQKIEIQTTKRVLLFGVRALAFIAVLGNQNKDLLFHYYHDPVLPKALIQTFNVKPKSLKSLMAHYDLAIFCQFLQHYDDVTVITYLQLAKKRVTRLFIIETMLTHDKPTGGMVDINTMVETGGKLRTLAAWEQLLGQVGAYKLANVLPITDYLTLVDVMLCKIESH
SIO_010081: DK880_RS01440
subclass of: SO_0000673
so part of: DK880_RS01440
location: 381952..383616
location: region:381952-383616:1
so has part: feature:381952-383616:1:exon

WP_109997063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381952-383616:1:exon

DK880_RS01445
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01445
old locus tag: DK880_00290
so part of: sequence
location: 383595..384572
location: region:383595-384572:1
so has part: feature:383595-384572:1:exon
subclass of: SO_0000010

position:383595:1
position: 383595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384572:1
position: 384572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383595-384572:1:exon

DK880_RS01445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01445
old locus tag: DK880_00290
inference: COORDINATES: protein motif:HMM:NF017532.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phytanoyl-CoA dioxygenase family protein
translation: MQDRIPLEEKGFMVVRQLIPLALAEAALADIKHTLTKLAQRLSVPIADYMYCTGRWATDSPVTKCISTLDVFIKHYLEALWQCPVVAKKANVICKTADLIESIPFHQDIAYSFNAPYHFSVWVALNDVRATSGALQVIKGSHQWPVAPLVDFWQPHFVDRKADIYKDQIETLPIATGDAIIFDAKLWHGSAENLEAKDRFSYVTRWVIPAKEFPEIPKPKVSDFGLLNCGFLTEHILRKALPLFVHLTIPQNKTELIYSWLNLLTQPLPISGIDPIQAQQDLYKLLILEQASTLHDAGDSLGKVYKNVWFSLLRFLNQSITVVGN
SIO_010081: DK880_RS01445
subclass of: SO_0000673
so part of: DK880_RS01445
location: 383595..384572
location: region:383595-384572:1
so has part: feature:383595-384572:1:exon

WP_109997064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:383595-384572:1:exon

DK880_RS01450
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01450
old locus tag: DK880_00291
so part of: sequence
location: complement(385514..386833)
location: region:385514-386833:-1
so has part: feature:385514-386833:-1:exon
subclass of: SO_0000010

position:385514:-1
position: 385514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386833:-1
position: 386833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385514-386833:-1:exon

DK880_RS01450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01450
old locus tag: DK880_00291
inference: COORDINATES: protein motif:HMM:NF017508.2
GO process: GO:0006457 - protein folding [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: trigger factor
translation: MNPAHGIISITLHESDYKAIVEQQLKHYAQKVRLKGFRVGAVPLALVKKMHGQAILAEELRKIAYKALQDYVTEEAIPIFIEPLLVAVPMQLDLLQQDSFTFSYEVGLLAIDNVALGPPISVTEFEIESVEDALVDELIEGLQWVHGQALPLKESDVHALLQGSLTDSIYQQQIKVRIAVERVPSPLRAALIGCHVGDKVTITQAMLADHSPAFLGLTFREWAAFCKQEAVWSALFTIEKIAHVTPAELNIAFFNLLLGEGVADSQDAFRSAIVQVILKDKRMEAHYAFYESLREELFKYNQIALPEAFIKKWISVNNPNATAEEIAYYYTVEEANLKFEFILGSIVRNNNLAVTQSDVIEEAKRIYTDYAAHNLKNRELEESDIQGGLLSFLQKDSGKHYAQLHEKLSKNRAIAFIKQHIAVISQKVTAAQFDARLKI
SIO_010081: DK880_RS01450
subclass of: SO_0000673
so part of: DK880_RS01450
location: complement(385514..386833)
location: region:385514-386833:-1
so has part: feature:385514-386833:-1:exon

WP_162534098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385514-386833:-1:exon

DK880_RS01455
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01455
old locus tag: DK880_00292
so part of: sequence
location: complement(386922..387003)
location: region:386922-387003:-1
so has part: feature:386922-387003:-1:exon
subclass of: SO_0000663

position:386922:-1
position: 386922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387003:-1
position: 387003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386922-387003:-1:exon

DK880_RS01455
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 247481
locus tag: DK880_RS01455
old locus tag: DK880_00292
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(386967..386969),aa:Leu,seq:tag)
SIO_010081: DK880_RS01455
subclass of: SO_0000673
so part of: DK880_RS01455
location: complement(386922..387003)
location: region:386922-387003:-1
so has part: feature:386922-387003:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:386922-387003:-1:exon

DK880_RS01460
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01460
old locus tag: DK880_00293
so part of: sequence
location: 387471..388154
location: region:387471-388154:1
so has part: feature:387471-388154:1:exon
subclass of: SO_0000010

position:387471:1
position: 387471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388154:1
position: 388154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387471-388154:1:exon

DK880_RS01460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01460
old locus tag: DK880_00293
inference: COORDINATES: protein motif:HMM:NF013718.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphatase PAP2 family protein
translation: MNKNYSFTTLKENRLFFYLMGILLSIGAFPLILWDKISFFILIKQWHHPIMDRLAPYLSYVGDGITYGCIVLVAILVGASYSNICIMAGSFGLMSCVVQLLFKRGFCSHLLRPTACIPLHALHVVADVKLEKTLTFPSGHAATIFVLASLIQLLHNKHNNVLYTFSLLLLAILVSYSRIYLCQHFYTDIYAGACIGTGASLLVYVWVNQTNIHLYLGRLVYHFIYRK
SIO_010081: DK880_RS01460
subclass of: SO_0000673
so part of: DK880_RS01460
location: 387471..388154
location: region:387471-388154:1
so has part: feature:387471-388154:1:exon

WP_109997066.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:387471-388154:1:exon

DK880_RS01465
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: dut
locus tag: DK880_RS01465
old locus tag: DK880_00294
so part of: sequence
location: complement(388170..388604)
location: region:388170-388604:-1
so has part: feature:388170-388604:-1:exon
subclass of: SO_0000010

position:388170:-1
position: 388170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388604:-1
position: 388604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388170-388604:-1:exon

DK880_RS01465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: dut
locus tag: DK880_RS01465
old locus tag: DK880_00294
EC number: 3.6.1.23
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934635.1
GO function: GO:0004170 - dUTP diphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO process: GO:0006226 - dUMP biosynthetic process [Evidence IEA]; GO:0046081 - dUTP catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dUTP diphosphatase
translation: MRIPIINYSHHPLPAYATLGASGMDVRAFIPLPISLEPGQRKAIDTGIAIALPAGYEAQVRPRSGLALQQGITVLNSPGTIDADYRGVIKVLLINLGNESFVIQDGDRIAQLVVACYTTVVWQEVTLLAPTDRGEGGYGSTGRS
SIO_010081: DK880_RS01465
subclass of: SO_0000673
so part of: DK880_RS01465
location: complement(388170..388604)
location: region:388170-388604:-1
so has part: feature:388170-388604:-1:exon

WP_109997067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:388170-388604:-1:exon

DK880_RS01470
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: gatA
locus tag: DK880_RS01470
old locus tag: DK880_00295
so part of: sequence
location: complement(388635..390101)
location: region:388635-390101:-1
so has part: feature:388635-390101:-1:exon
subclass of: SO_0000010

position:388635:-1
position: 388635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390101:-1
position: 390101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388635-390101:-1:exon

DK880_RS01470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: gatA
locus tag: DK880_RS01470
old locus tag: DK880_00295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014798031.1
GO component: GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO function: GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
translation: MVNIPSYLNSFYLLRPLLYTQALTLQTVVAQFLQQVQAQRALNAFIKVYEQEATQRAALIDQKIAAGKAAPLAGMVVGLKDMISYKDHPLQAGSKILTNYIAPFHATVTQRLLEADALILGHQNCDEFGMGSSSENTYFGTVRNPLDRTRVAGGSSGGSAAAVKANMCHVSIGTDTGGSVRQPAAFCGLVGLKPSYGKISRYGVVAYASSLDTVGILAHTVADCATVLEVLAGPDGLDAMVVPYKTASHNAEAQQKNNYTIACLTETLHHDGLQPAIKARTLRSLACLQSEGNQVTHLHFELLKYALPTYYILTNAEASTNLARFDGIRYGYRGSDAVTLEEVYSKTRTEGFAKEVKKRIMLGTFVLSNGQYEAYYGKALKVRNLIKKALQEILSQYDFILLPTTTTTAFPINSFEHNPLSMYWADLYTVLASVAGLPALSLPNGVDENNLPIGIQIIGNYLEEEKLLAFARYLQSIQADSYPSIQKK
SIO_010081: DK880_RS01470
subclass of: SO_0000673
so part of: DK880_RS01470
location: complement(388635..390101)
location: region:388635-390101:-1
so has part: feature:388635-390101:-1:exon

WP_109997068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:388635-390101:-1:exon

DK880_RS01475
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01475
old locus tag: DK880_00296
so part of: sequence
location: complement(390129..390956)
location: region:390129-390956:-1
so has part: feature:390129-390956:-1:exon
subclass of: SO_0000010

position:390129:-1
position: 390129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390956:-1
position: 390956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390129-390956:-1:exon

DK880_RS01475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01475
old locus tag: DK880_00296
inference: COORDINATES: protein motif:HMM:NF022750.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3108 domain-containing protein
translation: MRYIQKLGSSFLLLVGILCVQLQMAHTAVLPFQLGEALTYHAYFFGIQAGTATMQVDDQVHSCNEQSCYKIQVKGISNKAVALLGFKVSHSYESYLDVDARPHKFFARIQDNDYIREESINFDYKGKKANMTVAESTHNMKQVENYFPFGSDEAPIWDMVSMICALRSIDVSKLEVGQHLSFGFLLDGRAMQEGILFLGKKTITTKLGSILTNVFAPIIPTKGTIFAGERPIELFIADDAHKVPIKLRVNLIVGSVEMELASYKGLNGILFPENQ
SIO_010081: DK880_RS01475
subclass of: SO_0000673
so part of: DK880_RS01475
location: complement(390129..390956)
location: region:390129-390956:-1
so has part: feature:390129-390956:-1:exon

WP_162534099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390129-390956:-1:exon

DK880_RS01480
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01480
old locus tag: DK880_00297
so part of: sequence
location: 391819..393615
location: region:391819-393615:1
so has part: feature:391819-393615:1:exon
subclass of: SO_0000010

position:391819:1
position: 391819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393615:1
position: 393615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391819-393615:1:exon

DK880_RS01480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01480
old locus tag: DK880_00297
inference: COORDINATES: protein motif:HMM:NF012869.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MAISKKTNIIPRNIFAFILYFMNQQRAGFSLMFLTNIIWAANNALYPYFTKVLVDKMTKLTPGIERPMRLLALPLVGIILCFSISEIFARIYGLLVIYVWPQFRKNIRMSLFSYAQGHAHSYFITHLTGGLAHKIAELPRACENIVSTLLGSFFSTLLGFCISLCILLFKTPIIFSIILFSFVLLFVAITFVNMRTIKEMAIHHAEAISTLDGQTVDSLSCMLTVRLFARTTHERDYLQKYQAHEIKQSQKAAKAIQVDYAWKGLLSFLFISITFYTLVHRWNHKRISIGDVTLIASTFAYIMGSIWHSHFHLIQLAKEIGVSKAALSILSEPHSMTHAPTEKSLCVTAGSIHFKGVSFGYIPGLNIFNQLSVTIKGKQKIGLVGYSGSGKSTFINLLLRLYDLNKGNILIDNQDISCVSPTSLYKQIAVIPQNPILFHRTIFENIQYGRLDATEAEVLEAARLAYCDEFVQHLEKGWETIIGERGAKLSGGQQQRIAIARAILKNAPILIMDEATSSLDSITEHLIQTNLKDFMQQCTTLVIAHRLSTLNHMDRILVLHQGRIIEDGPMPELLAKKGHFSRLWQTQAGGLLPALEHG
SIO_010081: DK880_RS01480
subclass of: SO_0000673
so part of: DK880_RS01480
location: 391819..393615
location: region:391819-393615:1
so has part: feature:391819-393615:1:exon

WP_162534100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391819-393615:1:exon

DK880_RS01485
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01485
old locus tag: DK880_00298
so part of: sequence
location: 393638..393712
location: region:393638-393712:1
so has part: feature:393638-393712:1:exon
subclass of: SO_0000663

position:393638:1
position: 393638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393712:1
position: 393712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393638-393712:1:exon

DK880_RS01485
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 247481
locus tag: DK880_RS01485
old locus tag: DK880_00298
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:393673..393675,aa:Pro,seq:ggg)
SIO_010081: DK880_RS01485
subclass of: SO_0000673
so part of: DK880_RS01485
location: 393638..393712
location: region:393638-393712:1
so has part: feature:393638-393712:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:393638-393712:1:exon

DK880_RS01490
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01490
old locus tag: DK880_00299
so part of: sequence
location: 393761..394372
location: region:393761-394372:1
so has part: feature:393761-394372:1:exon
subclass of: SO_0000010

position:393761:1
position: 393761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394372:1
position: 394372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393761-394372:1:exon

DK880_RS01490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01490
old locus tag: DK880_00299
EC number: 3.2.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934750.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-3-methyladenine glycosylase
translation: MILNRAFFLQKTNLVSTNLLGKVLCYRGLQGIITETESYIGVNDPACHAAKGFTKRTKVMFGPAGFSYVYLIYGMYHCLNIVTEALHFPAATLIRGIKLIHPPYTYLNGPGKLCKYLGIDRTHNAIDITDSKLFYIKDIGLQLPYQTTPRIGISKGIDKMWRYLVTQDTLMKTIPPNIQGYIDPDFPTPFSPIITNLPSSATL
SIO_010081: DK880_RS01490
subclass of: SO_0000673
so part of: DK880_RS01490
location: 393761..394372
location: region:393761-394372:1
so has part: feature:393761-394372:1:exon

WP_109997071.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:393761-394372:1:exon

DK880_RS01495
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01495
old locus tag: DK880_00300
so part of: sequence
location: complement(394375..395130)
location: region:394375-395130:-1
so has part: feature:394375-395130:-1:exon
subclass of: SO_0000010

position:394375:-1
position: 394375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395130:-1
position: 395130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394375-395130:-1:exon

DK880_RS01495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01495
old locus tag: DK880_00300
inference: COORDINATES: protein motif:HMM:NF013786.2
GO function: GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4'-phosphopantetheinyl transferase superfamily protein
translation: MLSVLDRWNHLELEENAIHIWYSLLPTLEVSVDGWLADFSKDEVEKAKKITSTQARVRYICARYMLRSILSMYLLQAPKSIQFAYTLYGKPYVCNPGVADVCFNVSHSNQCIVCAIAKKRAVGIDIEFLQSINFENIARRFFSHYEYRQLMHHTPPQQREKKFYSLWTCKEAFVKNIGQGLSYPLNAFTISIGPDQSAQLVVSARKDRGILEDYAIQIFSPHQAYLAAWVIQKPVKSIYRQYKWEKIMCYL
SIO_010081: DK880_RS01495
subclass of: SO_0000673
so part of: DK880_RS01495
location: complement(394375..395130)
location: region:394375-395130:-1
so has part: feature:394375-395130:-1:exon

WP_109997072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:394375-395130:-1:exon

DK880_RS01500
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01500
old locus tag: DK880_00301
so part of: sequence
location: complement(395517..395975)
location: region:395517-395975:-1
so has part: feature:395517-395975:-1:exon
subclass of: SO_0000010

position:395517:-1
position: 395517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395975:-1
position: 395975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395517-395975:-1:exon

DK880_RS01500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01500
old locus tag: DK880_00301
inference: COORDINATES: protein motif:HMM:NF025491.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4293 family protein
translation: MSTICLWPTIEIITMLQRIQSVYLGIIGIAMLFFLRLVWPIIGEVSRGDVCHAGRLLYSFSIAAVCLACFSIILTAYAIKRHDNRQLQFRLVCGLLLMLFLLTLLNVLCIYIQPASKWTYSLLCLISVGVFPLLAMYRIRKDDRLVRDDHLR
SIO_010081: DK880_RS01500
subclass of: SO_0000673
so part of: DK880_RS01500
location: complement(395517..395975)
location: region:395517-395975:-1
so has part: feature:395517-395975:-1:exon

WP_109997073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395517-395975:-1:exon

DK880_RS01505
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01505
old locus tag: DK880_00302
so part of: sequence
location: complement(396015..396088)
location: region:396015-396088:-1
so has part: feature:396015-396088:-1:exon
subclass of: SO_0000663

position:396015:-1
position: 396015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396088:-1
position: 396088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396015-396088:-1:exon

DK880_RS01505
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 247481
locus tag: DK880_RS01505
old locus tag: DK880_00302
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(396052..396054),aa:Asp,seq:gtc)
SIO_010081: DK880_RS01505
subclass of: SO_0000673
so part of: DK880_RS01505
location: complement(396015..396088)
location: region:396015-396088:-1
so has part: feature:396015-396088:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:396015-396088:-1:exon

DK880_RS01510
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01510
old locus tag: DK880_00303
so part of: sequence
location: 396384..396665
location: region:396384-396665:1
so has part: feature:396384-396665:1:exon
subclass of: SO_0000010

position:396384:1
position: 396384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396665:1
position: 396665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396384-396665:1:exon

DK880_RS01510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01510
old locus tag: DK880_00303
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008197987.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HU family DNA-binding protein
translation: MTTAEVISTISRRNGVDKKDIRSTMDELWRVIQDSIADNQRVHFSGFGSFFKKKRAKKIGRNISTNTAIVVEEHFIPSFKPSKAFATKIKMMV
SIO_010081: DK880_RS01510
subclass of: SO_0000673
so part of: DK880_RS01510
location: 396384..396665
location: region:396384-396665:1
so has part: feature:396384-396665:1:exon

WP_109997074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:396384-396665:1:exon

DK880_RS01515
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01515
old locus tag: DK880_00304
so part of: sequence
location: 396757..397221
location: region:396757-397221:1
so has part: feature:396757-397221:1:exon
subclass of: SO_0000010

position:396757:1
position: 396757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397221:1
position: 397221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396757-397221:1:exon

DK880_RS01515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01515
old locus tag: DK880_00304
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQCYILLKYSVSPRSPITLQLQPTQLRYKKENRLKRMGAPDCIFFPALALVLRTENKNISLSTIQAIYDVEDASTTQPVVPALSPQKVNLRKEKLASIVHAHYGLLLLPHAEQLICLLPLDVTQVREEMLALSLSREAGTEEETAALFHSCFIR
SIO_010081: DK880_RS01515
subclass of: SO_0000673
so part of: DK880_RS01515
location: 396757..397221
location: region:396757-397221:1
so has part: feature:396757-397221:1:exon

WP_109997075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:396757-397221:1:exon

DK880_RS01520
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01520
old locus tag: DK880_00305
so part of: sequence
location: 397402..398859
location: region:397402-398859:1
so has part: feature:397402-398859:1:exon
subclass of: SO_0000010

position:397402:1
position: 397402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398859:1
position: 398859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397402-398859:1:exon

DK880_RS01520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01520
old locus tag: DK880_00305
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:solute symporter family protein
translation: MELFNNLPFIMVIGFLLLTLVVGLYYSRKVKTLREYAVGNKDFATATLVATMLATNFGGGGLLRNVEQTYAKGLFWILFGLFSSAIGFWLLTPLMLRMGPFMQHLSLAESIGNAYGRLPRLVTALVSIIRSTLAVAMQIIAITTAIEVCINLSGSENEKMLQASITVLATLILILYSMFGGIRSVTFTDVLQFITFTAIIPLVAWFLFKSTNKSMVAVASILQKEPRFQLSTCLHAGKLLAIIALFLTSLASNITPTTIQRIYMASSPMQARKLFVYAGFFSLIITGSITLIALLLFVKAPTLSVAEIWPHIFTNIPSIFKGLVAISLLAMAMSTADSKLNTCAVLVSHDIVGSIQATKGIADKHKLGLARLTVLTMGIHAMLLVFQRRDLLSLLMFGFDVSVPIITAPFLLAVYGFRSSSRTALIGMATGILAIFAWNRWIQPMAGINGAFPCMLANGLAMLLAHYLLPQPAGTGWVAPDKMYQ
SIO_010081: DK880_RS01520
subclass of: SO_0000673
so part of: DK880_RS01520
location: 397402..398859
location: region:397402-398859:1
so has part: feature:397402-398859:1:exon

WP_109997076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:397402-398859:1:exon

DK880_RS01525
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01525
old locus tag: DK880_00306
so part of: sequence
location: 399075..402602
location: region:399075-402602:1
so has part: feature:399075-402602:1:exon
subclass of: SO_0000010

position:399075:1
position: 399075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402602:1
position: 402602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399075-402602:1:exon

DK880_RS01525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01525
old locus tag: DK880_00306
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MILCNNVPFVMVAFFLLLTLIVGLYYSRKATTFREYAIGNKQFATATLVATTLATAFGGGVLVSTVEQVHKLGLYYICYLPITNSISLWIISLLAVRMGPFMENLSLPETIGDVYGKYPRVITALASIGASVASLATQIIVMSQTISMCVDFLNFHIVTVFATLTLVFYSSFGGIRAVTFTDVMQFITFTIIIPLLALFMLHKVNKPVVEIISCLQRKEKFQFSNVFHFDIKLVAMITLILSNIMSWIEPTTMQKVYMSSGPIQARKVFEYASFFSFIIMGFIILIGLFIFVVSPELPVTGIWDFIMVNIPSFLKGFVCISLFAMTMSTADSELSTCSVMISHDILESLRNVKGTSYTKRVWVARLTTVILGLSAMFLAFKYNDLLELLFLVFDFSVPIVTAPFILIIFGFRGTSRTALIGMATGILAILSWNHWIKPMTAIDGAFFCMLANGLAMLAAHYLLPHPAGTGWVPPDKIYLQKQQEKKRIAKRNKKERAIFFTKENLAKLKPSAITLVLVGIYLVVSSLVSICYYNAQTKTVWACIPFFMLGVAYIGYVAFFANKIPDGAIGKYWFISVLVGFPLHLLLSCCLCETLLVPFILFFTHGTVLLWTLPFYWSLRALAITTGGILIAICCCKATVVWPDPMIVLPLVGVGSFLVMSVVYFKKQNRIQQERVAYFLQKQATQEAYELKKLAYSEELPTASPQNTLAQEGTILEKAIQNVTQSIAFVDSTTPFLKEDFQSIIDKFAGWAYYFRSRAKRQDQLLLQPTAIPLEALIDAGEVAYQKEKGYLPGLWVEEVVNIPDTMLGDREQLVRLLFLALNHVRQSSASFRSPITLQLQLTQLRYKKREPLEADGDPDCISFPALALILCVGEKSMPTLQAVYDVEDASTTQPMDPFVSPQMVNLRKENLASIVHAHYGLLLLPHAEQLVCLLPLDVSQVREEMLALSLPREAGTQEEDSITPHEKTASLARLSSFHDWIPSFESIDPFLIAEILLLLRRCYGFKRHASGQLFYVRAVGIAEWVAAWTDGHAKLVYATLLYDLVRYTRLPLSYIKANYHLIVYCFVENTIAIDSRKRLEESLLAIANRLKESLQKEHISVLYVKLAERLYDLKQASGYKDPTIVQAMAKESLTIDVELAQRYGEPGMAILLKHAAEEALAGAKPTEPEEGMNP
SIO_010081: DK880_RS01525
subclass of: SO_0000673
so part of: DK880_RS01525
location: 399075..402602
location: region:399075-402602:1
so has part: feature:399075-402602:1:exon

WP_109997077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:399075-402602:1:exon

DK880_RS01530
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01530
old locus tag: DK880_00307
so part of: sequence
location: 402866..406408
location: region:402866-406408:1
so has part: feature:402866-406408:1:exon
subclass of: SO_0000010

position:402866:1
position: 402866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406408:1
position: 406408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402866-406408:1:exon

DK880_RS01530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01530
old locus tag: DK880_00307
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MTLCNNLPLVMVMAFLLLTLVVGLYYSRKVTTFREYAVGNKQFATATLIATTLATGIGAPALVSVVEEIHSQGLCWVIVMPLSAFSYWLIRPLAFRMGPFMQHFSIAETLGNVYGSSLRIITALICILASITYIALQIKIMSMAIGTCINNMDIYYTKYTIIGATSVLIFYAVCGGIRSVTFTDILQFVTFTSVIPFLAWFMFVKTDKSIFDIIPILQCQPKFHISSVFTWSSQPIAMISLLLTCFFSAVEPPIMQRVYMASSPAQAKKVFGYCTVFSFIICIFIVLIGIFTFVGSPQLRTERIWQHVMQQIPFAFKGFIAISLLAMAMSTADSNLNSCSVMLSHDILGPIQKRTGIVFSLSPLWIARLTVLLVGISAMIVVFHYDNVYALMLLAIDWYIPMVLAPYILAIFGFRGTSHTAIIGICMGAFTILVWNRLIIPKTGIEGSFFCMLANGLAMLAAHYLLPQPAGTGWVPPDKIYQQRQQEKARIKRRSKQERAIFFTKENLAKLKPNAITLVLVGIYLIVSSLVSSCYYNAQTKTVWACIPFFMLGVGYIGYVAFFANKIPDGAIGKYWFISVLVGFPLHLLFSCFLCKTLLVPFILFFTHGTVLLWTLPFYWSLRGLAITAGGMLVVICCCKATVVWPPIILLLPILPFGLLFLVGNVWAKNSIVQKESRNLYFLQKQATQEAYELKKLAYSEELPTASPQNTLAQEGTILEKAIQNVTQSIAFVDSTTPFLKEDFQSIIDKFAEWAYYLKQRAKRQDQLLLQPTAIPLEALIDAGEVAYQKEKGCLPGLWVEEFVNMPATMLGDREQLVRLLFLALNHVRQSSASFRSPITLQLQPTQLRYKKREPLEADGDPDCISFPALALVVHTENKQIPLPILQTIYDVEGPAVTQPVVSALSPQKVNLHKEKLASIVYAHYGLLLWPHAEQLVCLLPLDVSQVREEMLALSLPREAGTQEEASITPHEKTASLARLSSFHDWIPSFESIDPFLIAEILLLLRRCYGFKRHASGQLFYVRAVGIAEWVAAWTDGHAKLVYATLLYDLVRYTRLPLSYIKANYHLIVYCFVENTIAIDSRKRLEESLLAITNRLKESLQKEHISVLYVKLAERLYDLKQASGYKDPTIVQAMAKESLTIDVELAQRYGEPGMAILLKQAAEEVLAGNKPTEPEGGMKP
SIO_010081: DK880_RS01530
subclass of: SO_0000673
so part of: DK880_RS01530
location: 402866..406408
location: region:402866-406408:1
so has part: feature:402866-406408:1:exon

WP_109997078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402866-406408:1:exon

DK880_RS01535
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01535
old locus tag: DK880_00308
so part of: sequence
location: 406665..410216
location: region:406665-410216:1
so has part: feature:406665-410216:1:exon
subclass of: SO_0000010

position:406665:1
position: 406665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410216:1
position: 410216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406665-410216:1:exon

DK880_RS01535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01535
old locus tag: DK880_00308
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MTLCNNLPLVMVMAFLLLTLVVGLYYSRRVTTFREYAIGNKQFATATLVATMLATEFGGGGLLRSVEQTYVQGLYWVLVGLSIPLGYWLLSSLMLRMGSFMQHFSLAESIGSVYGNIPKIATALSYMVSNIIGIGMQIIAMETAIKVCIDLNDNGNARMMQNSVTVVATCILIMYSIFGGIRSVTFTDVLQLITFTAVIPLVVWFIFVETNKSVVEVVSILHKEPKFQLSNCLHVNKLFDMAALFLASLSFFIHPTIVQRIYMASTPIQARKLCLYSGIFALVIRKFIALIALLLFVKAPLLSKDQIWPHIFTSLPSIFQGFIAISLLAMAMSTADSYLNVCAVTASHDILGSIKAIKIIADKNKLVLTRLITVIVGICAMLLAFWKRDLLSLFMFALDFSVPIVTAPFLLAIYGFRATSRTALIGMATGIVAILAWNRCVEPITAINGAFPSMLANGLAMLAAHYLLPHPAGTGWVPPDKIYQQRQQEKARIARRSKQERERFFSKENLIKLKPSRVVLLLTGLYLLVIGAASLGYGYDYTGHSLYSYGLLLLSGIGLLYMGCAVYGYHIIPDKAIGICWFFSLLVALPLHLLFSCFLCQTLLVPFILFFTHGTVLLWTLPFYWSLRALAITTGGMLIAICCCKATVVWPDPMIVLPLVGVGSFLVMLVVYFKKQNRIQQERVAYFLQKQATQEAYELKKLAYSEELPTASPQSLLAQEGTILEKAIQNVTQSIAFVDSTTPFLKEDFQSIIDKFAEWAYYFRSRAKRQDQLLLQPTAIPLEALIDAGEVAYQKEKGYLPGLWVEEVVNIPDTMLGDREQLVRLLFLALNHVRQSSASFRFPITLQLQLTQLRYKKREPLEADGDPDCISFPALALILCVGEKSMPTLQAVYDVEDASTTQPMDPFVSPQKVNLHKENLASIVHAHYGLLLLPHAEQLVCLLPLDVSQVREEMLALSLPREAGTQEEASITPHEKTASLARLSSFHDWIPSFESIDPFLIAEILLLLRRCYGFKRHASGQLFYVRAVGIAEWVAAWTDGHAKLVYATLLYDLVRYTRLPLSYIKANYHLIVYCFVENTIAIDSRKRLEESLLAIANRLKESLQKEYFSVLYVKLAERLYDLKHASGYKDPTIVQAMAKESLTIDVELAQRYGEPGMAILLKHAAEEALAGVKPTEPEGGMKP
SIO_010081: DK880_RS01535
subclass of: SO_0000673
so part of: DK880_RS01535
location: 406665..410216
location: region:406665-410216:1
so has part: feature:406665-410216:1:exon

WP_109997079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:406665-410216:1:exon

DK880_RS01540
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01540
old locus tag: DK880_00309
so part of: sequence
location: 410478..414029
location: region:410478-414029:1
so has part: feature:410478-414029:1:exon
subclass of: SO_0000010

position:410478:1
position: 410478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414029:1
position: 414029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410478-414029:1:exon

DK880_RS01540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01540
old locus tag: DK880_00309
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MTLFNNLPLVMVIGFLLLTLVVGLYYSRKVTTFREYAVGNKQFATATLVATLLASEFSGGGLLRGVEQTHAQGLFWILFGLSSPIAHWILTSLMLRMGPFMQHLSLAESISTSYGKMPRLVVALVSVIVNVIMVTMQIIAMTKAIEVCLDLSNSDNAKVMQASIPGIATLIVIGYSMFGGIRSVTFTDVLQFITFTAIIPLVAWFIFKSTDKSVLEVASILHKEPKFQLTSCLHINKLLALTTLFLANLVGHIDPVIIQRIYMASSPIQARKLFIHAGTFGFIIKGFIYLIALFLFVKAPTLSKDQIWPHVFQNIPPIFKGFIAVSLLAMAMSTADSMLNTCAVLISHDIVGSIQATKGIIDKYKLSLARYTVLIVGICAMLLAFQTSDLLALLQLAFACFIPIITAPFLLAVYGFRGTSRTALIGMATGIVAILAWNKWIEPMTGIDGAFPCMLANGLAMLAAHYLLPHPAGTGWVPPDKTYQQWQQEKERITRRNKQERKDFFLKAQLAKFKPSRAGLLLTGIYLLVIGTVSFVYCYYHSDQVQYSYSLLLLPCIGFLYIGCAIYSYQFIPDWVVGSCWFFSLLIALPLHLLFSCFLCQTLLVPFILFFTHGTVLLWTLPFYWSLRALAITTGGMLIAICCCKATVVWPDPMIVLPLVGVGSFLVMLVVYFKKQNRIQQERVAYFLQKQATQEAYELKKLAYSEELPTASPQNTLAQEGTILEKAIQNVTQSIAFVDSTTPFLKEDFQSIIDKFAEWAYYFRSRAKRQDQLLLQPTAIPLEALIDAGEVAYQKEKGYLPGLWVEEVVNIPDTMLGDREQLVRLLFLALNHVRQSSASFRFPITLQLQLTQLRYKKREPLEADGDPDCISFPALALILCVGEKSMPTLQAVYDVEDASTTQPVDPFVSPQKVNLHKENLASIVHAHYGLLLLPHAEQLVCLLPLDVSQVREEMLALSLPREAGTQEEDSITPHEKTASLARLSSFHDWIPSFESIDPFLIAEILLLLRRCYGFKRHASGQLFYVRAVGIAEWVAAWTDGHAKLVYATLLYDLVRYTRLPLSYIKANYHLIVYCFVENTIAIDSRKRLEESLLAITNRLKESLQKEHISVLYVKLAERLYDLKQASGYKDPTIVQAMAKESLTIDVELAQRYGEPGMAILLKQAAEEALAGAKPTEPEEGMKP
SIO_010081: DK880_RS01540
subclass of: SO_0000673
so part of: DK880_RS01540
location: 410478..414029
location: region:410478-414029:1
so has part: feature:410478-414029:1:exon

WP_109997080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:410478-414029:1:exon

DK880_RS01545
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01545
old locus tag: DK880_00310
so part of: sequence
location: 414287..417823
location: region:414287-417823:1
so has part: feature:414287-417823:1:exon
subclass of: SO_0000010

position:414287:1
position: 414287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417823:1
position: 417823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414287-417823:1:exon

DK880_RS01545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01545
old locus tag: DK880_00310
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MTLCNNLPLVMVMAFLLLTLVVGLYYSRKVKTFREYAVGHKQFATATLVATVLATSYGGAGLMRTVEFVYSEGLYWIIMEFLCNAFLFVVAPIALRMGPFMRNLSIAETIGNVYGIYPRIIVGISSICSSIAIITMQIHVLRKAICTCTGSVDFLKVTILATLVLIFYSILGGIRAVTLTDVLQFITFSIIIPLLAWFVFIKIRKTPITTITSLLQNTQKYQFSDFLKLDMKLIAILALLLSSLVAYIADPVFMQRIYMASAPIQAYKVFTISSLFTFLITGSITLIGLFVFIGEPGLQQQQIWPYIMNHISPFFKGLTCISLLAMTMSTADSCLNNCAIIIVHDIMGSIKKISLTNTIQLARLTSFVVGLCAMVLAFRCKNLLELLKISFDFSIPIVTAPFLLAIYGFRSSSLTALIGMGIGALTILAWNKWIKPLESTIEIDGAFPCMLANGLAMLAAHYLLPQPAGTGWVTPDKIYLQKQQEKERIARRNKQERAIFFTKENLAKLKPNAITLVLVGIYLIVSSLVNSCYYNAQTKTVWQCLPFYMLGVGYIGYVAFLKENNKIPDWAIGKYWFISVLVGFPLHLLFSCFLCKTLLIPFILFFTHGTVLLWTLPLYWSLRGLAITAGGMLVAICYCKATVVWPPITLLLPILPFGLLLLVGNVWAKNSIVQKESRNLYFLQKQATQEAYELKKLAYREELPTASPQNTLAQEGTILEKAIQNVTQSIAFVDSTTPFLKEDFQSILDKFAEWAYYFKSRAKRQDQLLLQPTVIPLEVLIDAGEVAYQKEKGCLPGLWVEEFVNMPATMLGDREQLVRLLFLAFSHVRQSSVSPRSPITLQLQLTQLRYKKREPLEADGSPDCITFPALALILCGGEKSMPTLQAVYDVESLATTQPVDPFVSPQKGNLRKENLASIVHAHYGLLLLPHAEQLVCLLPLDVSQVREEMLALSLPREAGTQEEASITPHEKTASLARLSSFHDWIPSFESIDPFLIAEILLLLRRCYGFKRHASGQLFYVRAVGIAEWVAAWTDGHAKLVYATLLYDLVRYTCLPLSYIKANYHLIVYCFVENTIAIDSRKRLEESLLAIANRFKESLQKEYFSVLYVKLAERLYDLKHASGYKDPTIVQAMAKESLTIDVELAQRYGEPGMAILLKHAAEEALAGAKPTEPEEGMKP
SIO_010081: DK880_RS01545
subclass of: SO_0000673
so part of: DK880_RS01545
location: 414287..417823
location: region:414287-417823:1
so has part: feature:414287-417823:1:exon

WP_109997081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414287-417823:1:exon

DK880_RS01550
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01550
old locus tag: DK880_00311
so part of: sequence
location: 418078..421668
location: region:418078-421668:1
so has part: feature:418078-421668:1:exon
subclass of: SO_0000010

position:418078:1
position: 418078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421668:1
position: 421668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418078-421668:1:exon

DK880_RS01550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01550
old locus tag: DK880_00311
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:solute symporter family protein
translation: MTLFNNLPLVMIVAFLLLTLVVGLYYSKKVRTLREYAIGNKDFATATLVATLLATAWGGGGLIRTVEEIYSRGFYHICISFSSVISLWIISLLAFRMGPFMENLSVSETIGSVYGKYPRIIASLAYVIASIPSITTQIKVTALAISMSTELNDSIKNYSIVFAAFILVFYSTFGGIRAVTFTDVLQFITFTIIIPLLTLSLFEVINKPVVACLQSHQKFQPYSVFRFDMQLMAMVSLFLSNLMSSTIAPAKIQRLYMSSGTVQAHKVFWYSSIFNIIITGCVVLIGLFAFVNSDSLPKETVWNHIMESIHPIFKGLISISLLAMAMSTADSKLNTCAIMISHDLIESIKNIKFPCVHSHQNRFMARIISVLDLCLKPVLAYPIRLARITTLIIGFLAMVLAFKYKDLLKLMTLVINLYVPVVTAPFILSVFGFRSSSRTAVIGMITGVLTMKAWNQWIKPSTIPSTVIGVDGAFFCMLANGLAMLLAHYLLPQPAGTGWVPPDKIYLQRQQEKERIARRNKKERTITKENLAKLKPNAIALVLVGIYLIVSSLVSNYYYNGQFKALWQCLPFCMLGVGYIGYVAFLKENNKIPDWAIGKYWFISVLVGFPLHLLFSCFLCKTLLVPFILFFTHGTVLLWTLPLYWSLRGLAITAGGMLVAICYCKATVVWPPITLLLPILPFGLLLLVGNVWAKNSIVQKESRNLYFLQKQATQEAYELKKLAYSEELPTASPQSLLAQEGTILEKAIQNVTQSIAFVDSTTPFLKEDFQSIIDKFAEWAYYFRSRAKRQDQLLLQPTAIPLEALIDAGEVAYQKEKGYLPGLWIEESVNIPDTLLGDREQLVRLLFLALNHVRQSSVSFRSTITLQLQPTQLRYKKREPLEADGTPACISFPALALVLRTENKNIPLFTIQAIYDVEDASITQPVDPFVSPQKVNLHKENLASIVHAHYGLLLLPHAEQLVCLLPLDVTQVREEMLALSLPREAGTQEETSITPHEKTASLATLSAFHDWIPSFESIDSSLIAEILLLLRRCYGFKRHASGQLFYVRAVAIAEWVAAWTDGHAKLVYATLLYDLVRYTRLPLSYIKGNYNMGVYCFVENVIAIDSRERLEESLLAITNRLKESLQKEHISVLYVKLAERLYDLKQASGYKDPTIVQAMAKESLTIDVELAQRYGEPGMAILLKHAAEEALLINKQ
SIO_010081: DK880_RS01550
subclass of: SO_0000673
so part of: DK880_RS01550
location: 418078..421668
location: region:418078-421668:1
so has part: feature:418078-421668:1:exon

WP_109997082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:418078-421668:1:exon

DK880_RS01555
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01555
old locus tag: DK880_00312
so part of: sequence
location: 421788..422771
location: region:421788-422771:1
so has part: feature:421788-422771:1:exon
subclass of: SO_0000010

position:421788:1
position: 421788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422771:1
position: 422771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421788-422771:1:exon

DK880_RS01555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01555
old locus tag: DK880_00312
inference: COORDINATES: protein motif:HMM:TIGR01784.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MTSHLKHDALIKKILTDQLAAQEFLEHYLPADFKALVDLSQITIEKESFVEDNLKRKLTDLLYSVKTKNQEKAFVYVLIEAQVIPDHWMALRLWKYMLLLCERNRKNKNSLPLICPIVIYHGSKPYHAPRNIWQLFSNPEQAQKLMGEEYQLIDLQSMSDDAILQKKHLAMFEYLLKHIHKRDILKLWENVFTHCQHALLVDKEKGYICIKALVWYSDAKLPEEKQAALERVISSHLSKEETATIMRTIAQKYIEEGRQQGIMQGMEKGMEKGMEKGRQQGIMQGMEKGKMERNLEIAKVLLADGVEVSFIAKITGLDTVFIASLQL
SIO_010081: DK880_RS01555
subclass of: SO_0000673
so part of: DK880_RS01555
location: 421788..422771
location: region:421788-422771:1
so has part: feature:421788-422771:1:exon

WP_109997083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:421788-422771:1:exon

DK880_RS01560
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01560
old locus tag: DK880_00313
so part of: sequence
location: complement(423003..424511)
location: region:423003-424511:-1
so has part: feature:423003-424511:-1:exon
subclass of: SO_0000010

position:423003:-1
position: 423003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424511:-1
position: 424511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423003-424511:-1:exon

DK880_RS01560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01560
old locus tag: DK880_00313
EC number: 3.4.17.19
inference: COORDINATES: protein motif:HMM:NF014165.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carboxypeptidase M32
translation: MSLYKDFIEKFSHIQLLRQIEQLLEWDQQVCMPAAAVEIRSKQLAYLASLLYKETTSAAYRDALEAMIDINTENIKIKDLSFTEAANLREWARDFKRMTKLTKSFIQTYYTVVTKATEVWKEAKKTANFALFSPWLQKVVALNQEKANLLGYTTTPYDALLDLYEPGITTEDLSSLFSDLEYFLLDKVKRTSGKNSPYEVYFEGSFAQADLMSFNQLILDSLGLYNNHNSRVDFSVHPFCMGIHPTDVRFTIHKDNGLLENIFATLHEGGHALYELGLSKEEWATPAGQAASMGLHESQSRWWEVMVGKSLPFWKYFYPKFQMIFPQFKQLALSDFYQHINHIRPSCVRIYADEITYPLHIILRFKLEKQLIEGTIEVEDVPHLWNDEMKRLLGITPTNDAEGCLQDIHWSSGSFGYFPTYALGNIYAAQCFHAFEQSFPAWKENIATGKFSFMRDWLRERIHQFGRIYSVAQIIQSITETPMAVQSYKEYITQKYTNLAIF
SIO_010081: DK880_RS01560
subclass of: SO_0000673
so part of: DK880_RS01560
location: complement(423003..424511)
location: region:423003-424511:-1
so has part: feature:423003-424511:-1:exon

WP_109997084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:423003-424511:-1:exon

DK880_RS05135
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05135
so part of: sequence
location: complement(424571..424738)
location: region:424571-424738:-1
so has part: feature:424571-424738:-1:exon
subclass of: SO_0000010

position:424571:-1
position: 424571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424738:-1
position: 424738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424571-424738:-1:exon

DK880_RS05135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05135
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGRSFVGQQSNAQEDANLRSTANLLNIPGVPIDGFPCLAAGVKQDKKIFNGSIYL
SIO_010081: DK880_RS05135
subclass of: SO_0000673
so part of: DK880_RS05135
location: complement(424571..424738)
location: region:424571-424738:-1
so has part: feature:424571-424738:-1:exon

WP_162534102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:424571-424738:-1:exon

DK880_RS01565
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01565
old locus tag: DK880_00314
so part of: sequence
location: complement(424995..425705)
location: region:424995-425705:-1
so has part: feature:424995-425705:-1:exon
subclass of: SO_0000010

position:424995:-1
position: 424995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425705:-1
position: 425705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424995-425705:-1:exon

DK880_RS01565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01565
old locus tag: DK880_00314
EC number: 3.4.21.105
inference: COORDINATES: protein motif:HMM:NF013827.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rhomboid family intramembrane serine protease
translation: MTNFLYHYLRSQFKQPKSGWMQLIWLHILSFVLIGLLHTFFYICGYASRMPLLYEQLTLPSCFVLLLKRPWAIVTYSFVHHSFLELGLDMLMLYTFGQSIRLVTHTKSVVYLYCLGKIAGACAFFALYQLSPPFKESLAYLHGPLPAIYAIMVAVCVLIPDLKVNLFFISLPLRVVVVFLLLFSFMQLTGKHAGHYVAQLGGAIVGYLYAQRYKNKKGGNQTFGGTTKFIRLHKTT
SIO_010081: DK880_RS01565
subclass of: SO_0000673
so part of: DK880_RS01565
location: complement(424995..425705)
location: region:424995-425705:-1
so has part: feature:424995-425705:-1:exon

WP_109997085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:424995-425705:-1:exon

DK880_RS01570
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01570
old locus tag: DK880_00315
so part of: sequence
location: 425928..426542
location: region:425928-426542:1
so has part: feature:425928-426542:1:exon
subclass of: SO_0000010

position:425928:1
position: 425928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426542:1
position: 426542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425928-426542:1:exon

DK880_RS01570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01570
old locus tag: DK880_00315
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLTTLRKRNQKRTIVLGSWLVLVYQGCTSNGKQSMKQQLYAPTEAISAIPSAPSRSLSEDLPELKSLTKKEAKQKAKNKLTETEKAINQCFNYARHIQQKNYQEQLGEIMLHKTCITWIGHRLLQSSIQTKTGQIGLLEATFTDAMQYFHEATPYILQAKQLKSNKAYKKMHQTHEKLRKQLDFIRDEIVQINAFMKQQHVFRK
SIO_010081: DK880_RS01570
subclass of: SO_0000673
so part of: DK880_RS01570
location: 425928..426542
location: region:425928-426542:1
so has part: feature:425928-426542:1:exon

WP_109997086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:425928-426542:1:exon

DK880_RS01575
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rpsL
locus tag: DK880_RS01575
so part of: sequence
location: 426815..427192
location: region:426815-427192:1
so has part: feature:426815-427192:1:exon
subclass of: SO_0000010

position:426815:1
position: 426815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427192:1
position: 427192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426815-427192:1:exon

DK880_RS01575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rpsL
locus tag: DK880_RS01575
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934227.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S12
translation: MLTIQQLVRRGRKRTASASKAPALSSCPQRRGVCTKVYTLKPRKPNSSMKKVARVRLTTGKEVNVYIPGEGHNLQEHSIVLVKGGGVKDLSGIRYRIIRGVLDTGGVNGRRQGRSLYGAKQPKKK
SIO_010081: DK880_RS01575
subclass of: SO_0000673
so part of: DK880_RS01575
location: 426815..427192
location: region:426815-427192:1
so has part: feature:426815-427192:1:exon

WP_109997087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:426815-427192:1:exon

DK880_RS01580
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rpsG
locus tag: DK880_RS01580
old locus tag: DK880_00317
so part of: sequence
location: 427371..427841
location: region:427371-427841:1
so has part: feature:427371-427841:1:exon
subclass of: SO_0000010

position:427371:1
position: 427371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427841:1
position: 427841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427371-427841:1:exon

DK880_RS01580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rpsG
locus tag: DK880_RS01580
old locus tag: DK880_00317
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934226.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S7
translation: MRRKQATKRILSPDYKFGDPLITRFINGLMQQGKKSIAATIFYNTIDSVAHKTNENGLEVFRKALHNVTPTLEVKRRRVGGATLQVPIEIRQDRKVFLSIKWLIAYARARGEKTMQEKLTNEIIAASKEEGAAFKRKIDIHKMASSNKAFSHFDLK
SIO_010081: DK880_RS01580
subclass of: SO_0000673
so part of: DK880_RS01580
location: 427371..427841
location: region:427371-427841:1
so has part: feature:427371-427841:1:exon

WP_109997088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:427371-427841:1:exon

DK880_RS01585
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: fusA
locus tag: DK880_RS01585
old locus tag: DK880_00318
so part of: sequence
location: 427842..429983
location: region:427842-429983:1
so has part: feature:427842-429983:1:exon
subclass of: SO_0000010

position:427842:1
position: 427842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429983:1
position: 429983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427842-429983:1:exon

DK880_RS01585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: fusA
locus tag: DK880_RS01585
old locus tag: DK880_00318
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009581874.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor G
translation: MATELAFLRNIGIMAHIDAGKTTTTERILYYTGLTHKIGEVHEGGAVMDWMAQEQERGITITSAATTTFWKYPTSQGNVHNQTQTYKINIIDTPGHVDFTVEVERSLRVLDGAVALFCAVSGVEPQSETVWRQADKYKVPRICFVNKMDRPGADFFNTLNEIKDKLGANPVPLQIPIGSEASFRGVVDLITYQAIIWNETDLGMSYEIIAIPEDLTETVEEWRQKLLESVASYDEVLMEKFFDNPAAITTDEIRAAIRKAVIDLSFSPVLCGSAFKNKGVQALLDSVCAYLPSPMDLPPVTAIHPDTEAAIIREANNSAPFTALAFKIATDPFVGRLAFLRVYAGELEAGSYVHNNRTGKKERIARLMQMHANKQNPIDKVQAGDICAVVGFKEIKTGDTLTGEKDRAILESITFPEPVIGYSIEPKKQADQDKLTLSIAKLMEEDPTLRMETDRETGQTILKGMGELHLEIIIDRLKREFKLEINQGAPQVAYKEALTITIEHKEVYKKQTGGRGKFADIVFEIGPKEKTTPSSDMPGLEFINKIVGGAIPKEFIPAIQKGFEAAMDNGPLANYPVESMRVKLLHGSYHEVDSDSLSFELAARAGFRAAAQKASPVLLEPIMAVEVATPDAFTGPVTGDLNRRRGIMRGMNNKGGAQIIKADVPLAELFGYVTDLRTITSGRASASLTFSHYEPVSKNLAENIINKAKGITL
SIO_010081: DK880_RS01585
subclass of: SO_0000673
so part of: DK880_RS01585
location: 427842..429983
location: region:427842-429983:1
so has part: feature:427842-429983:1:exon

WP_109997089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:427842-429983:1:exon

DK880_RS01590
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rpsJ
locus tag: DK880_RS01590
old locus tag: DK880_00319
so part of: sequence
location: 430009..430314
location: region:430009-430314:1
so has part: feature:430009-430314:1:exon
subclass of: SO_0000010

position:430009:1
position: 430009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430314:1
position: 430314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430009-430314:1:exon

DK880_RS01590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rpsJ
locus tag: DK880_RS01590
old locus tag: DK880_00319
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012472342.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S10
translation: MKQKIRIKLKSFDAMLLDKSAKRIVKAVKATKTVVNGPIPLPCKKEVYTVLRSPHIDKKSREQFQLCTHKRLIDIYYSSAKAVDALTKLELPSGVEVKIEA
SIO_010081: DK880_RS01590
subclass of: SO_0000673
so part of: DK880_RS01590
location: 430009..430314
location: region:430009-430314:1
so has part: feature:430009-430314:1:exon

WP_109997090.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430009-430314:1:exon

DK880_RS01595
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01595
old locus tag: DK880_00320
so part of: sequence
location: complement(430589..430819)
location: region:430589-430819:-1
so has part: feature:430589-430819:-1:exon
subclass of: SO_0000010

position:430589:-1
position: 430589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430819:-1
position: 430819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430589-430819:-1:exon

DK880_RS01595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01595
old locus tag: DK880_00320
inference: COORDINATES: protein motif:HMM:NF012235.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MRFYFAFYQEVVEAAKKARCHDFISFLTDEYRMHAESSGLKLSGGQRQKICIAGTILKNTPCMLFNESILVVDYHK
SIO_010081: DK880_RS01595
subclass of: SO_0000673
so part of: DK880_RS01595
location: complement(430589..430819)
location: region:430589-430819:-1
so has part: feature:430589-430819:-1:exon

WP_109997091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430589-430819:-1:exon

DK880_RS01600
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01600
pseudo: true
so part of: sequence
location: <430799..>430985
location: region:430799-430985:1
so has part: feature:430799-430985:1:exon
subclass of: SO_0000010

position:430799:1
position: 430799
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:430985:1
position: 430985
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430799-430985:1:exon

DK880_RS01600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012736482.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS481 family transposase
SIO_010081: DK880_RS01600
subclass of: SO_0000673
so part of: DK880_RS01600
location: <430799..>430985
location: region:430799-430985:1
so has part: feature:430799-430985:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:430799-430985:1:exon

DK880_RS01605
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01605
old locus tag: DK880_00321
so part of: sequence
location: complement(431443..433695)
location: region:431443-433695:-1
so has part: feature:431443-433695:-1:exon
subclass of: SO_0000010

position:431443:-1
position: 431443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433695:-1
position: 433695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431443-433695:-1:exon

DK880_RS01605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01605
old locus tag: DK880_00321
inference: COORDINATES: protein motif:HMM:NF024206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MLTEYLLLPLFSTFVLGMGFPQLAMANAAIKVVNQEVPILSTIPPSIPINNFVAPIALHRAAAQGNVSILRSSLEAGANVHAVDSYQTTALHIAAARGHLFCVQELINVGAKVNLTDSFGRTPLYLAAQKGHLPIIRELMIAGANMRIVNQQGRTPLHAAAEADSVACVSYLLDRRGANVHAVDADLVTPLHCAALAGSLASVQALIQAGAKVQVFTKQDKLTPLHMAAQSGKVACIRFLLQHHANVNTVTPHGISPLYLAAQQGQLAALQELVQHKAAINAVEGLHTPLHAAALHGHVNGLQFLLEAGGNPQARDKEQNTPLHVAAYYGRLTCLQLLLRMSPESIEVLAAKQRTPLHLAAQAGHFACVEQLVAIGAAVNAVDIYHKTPLHLAAFHGHNRCLNLLIQTGGNVHLVTEECYTPLHMAAKGNQVAAVKLLLQAGAKLDALDRFHHTPLHLAANFQHKDCTIALIEQGAAVDAANQWGIMPFHIAAKNGDFDLLQLLLANEKCKKNINAAKKSGSTAVHIVAKKGNIACLEALIQAGASVRVCNKAKETPLYLAASNGHLACIEMLIKADEQENGSPIAKKLKNKLAEQPGMDKLVKRKHKPKLDVANRLGETALHAAVQHGHTDCILLLLRHGASVKTRRKTGETPLHTAAQNGCLVSVRAILAASTQSDIDAVDNYANTPLHLAAQNGHLSIVRTLINASASLKKRNKFNKTADYLALQNGHVACHKELERALQGKRQLPS
SIO_010081: DK880_RS01605
subclass of: SO_0000673
so part of: DK880_RS01605
location: complement(431443..433695)
location: region:431443-433695:-1
so has part: feature:431443-433695:-1:exon

WP_109997092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:431443-433695:-1:exon

DK880_RS01610
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01610
old locus tag: DK880_00322
so part of: sequence
location: 433853..434218
location: region:433853-434218:1
so has part: feature:433853-434218:1:exon
subclass of: SO_0000010

position:433853:1
position: 433853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434218:1
position: 434218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433853-434218:1:exon

DK880_RS01610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01610
old locus tag: DK880_00322
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNLNMNIRKLLFDLVKFILRLLFDACAMVCIAKKAGKKLSSLIETSKDNMKTKGKKIGRMLLLICFIWTLLSLGLRFLLFGLATWLNKLLSGTCIGFCIVSVLCFLSALGMIRLLYKSNT
SIO_010081: DK880_RS01610
subclass of: SO_0000673
so part of: DK880_RS01610
location: 433853..434218
location: region:433853-434218:1
so has part: feature:433853-434218:1:exon

WP_109997093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433853-434218:1:exon

DK880_RS01615
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: atpG
locus tag: DK880_RS01615
old locus tag: DK880_00323
so part of: sequence
location: complement(434409..435299)
location: region:434409-435299:-1
so has part: feature:434409-435299:-1:exon
subclass of: SO_0000010

position:434409:-1
position: 434409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435299:-1
position: 435299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434409-435299:-1:exon

DK880_RS01615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: atpG
locus tag: DK880_RS01615
old locus tag: DK880_00323
EC number: 7.1.2.2
inference: COORDINATES: protein motif:HMM:TIGR01146.1
GO component: GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO function: GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP synthase F1 subunit gamma
translation: MAYLKEVVNRINLITSTQQITKAMNMIAASKLYKIQQLLLPLKEYTMQYNILLQTALQGISGSMLSHPLTVKAAEKPRRLLLIVVTADRGLCGAFNKNVLKAASCYMESCKSAATATIELLVIGKKAYQCFKNGNYPIIDDYVDLLEKDFWKGGHRLAEHCIKTYQEARYTEIVWVYTAFKNAVSQEVATASFLPLALNAYESPPNTQWPHYMYEPTQQLLIAQLIPEVLKNQVMNRLVESMASEHAARMLTMSQATDNADAFLKVLRIHYNRTRQALITNSLAEITTAAEALATR
SIO_010081: DK880_RS01615
subclass of: SO_0000673
so part of: DK880_RS01615
location: complement(434409..435299)
location: region:434409-435299:-1
so has part: feature:434409-435299:-1:exon

WP_109997094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:434409-435299:-1:exon

DK880_RS01620
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: atpA
locus tag: DK880_RS01620
old locus tag: DK880_00324
so part of: sequence
location: complement(435388..436965)
location: region:435388-436965:-1
so has part: feature:435388-436965:-1:exon
subclass of: SO_0000010

position:435388:-1
position: 435388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436965:-1
position: 436965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435388-436965:-1:exon

DK880_RS01620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: atpA
locus tag: DK880_RS01620
old locus tag: DK880_00324
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934847.1
GO component: GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO function: GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit alpha
translation: MVHINTNEILALLQEQLASFKTKAELEETGTVVQSGDGVVRIYGLFSVQAGELLVFDNGCKGLALNLEEQLLGAVVLGDANTIKEGDMVSRTRRVVSIQVGEGLLGRVINTLGEPIDGNGPIAGPCFALPLERNAPGVIYREPVNTPLQTGLKTIDAMVPIGRGQRELIIGDRQSGKTTIAIDTIINQRRLFEKGEPVYCIYVAIGQKASSIANVVDTLTRYGAMPYTIIVAASSAAAASMQSFAPFAGAAIGEFFRDTGRNALVIYDDLSKQAVAYRELSLLLRRPPGREGFPGDVFYLHARLLERAARIISNDAMASSMNDCPQSLQGKIKGGGSLTALPIVETQMGDVSAYIPTNVISITDGQIFLETNLFNAGIRPAINVGISVSRIGGAAQMKAIKKIAATLKLDQAQFAELEAFSKFSSDLEATTKRAIERGRKNQELLNQGLHAPMPVEEQIALLYIAMGGYLDAVPLDQVKLFEKQFLDILRIQHPTLLTSIAGGQWDNQLIKMLITVAKNILVKYT
SIO_010081: DK880_RS01620
subclass of: SO_0000673
so part of: DK880_RS01620
location: complement(435388..436965)
location: region:435388-436965:-1
so has part: feature:435388-436965:-1:exon

WP_109997095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:435388-436965:-1:exon

DK880_RS01625
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: atpH
locus tag: DK880_RS01625
old locus tag: DK880_00325
so part of: sequence
location: complement(437215..437805)
location: region:437215-437805:-1
so has part: feature:437215-437805:-1:exon
subclass of: SO_0000010

position:437215:-1
position: 437215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437805:-1
position: 437805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437215-437805:-1:exon

DK880_RS01625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: atpH
locus tag: DK880_RS01625
old locus tag: DK880_00325
EC number: 7.1.2.2
inference: COORDINATES: protein motif:HMM:NF012439.2
GO component: GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO function: GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP synthase F1 subunit delta
translation: MLNCNNKLQSSGCMAEQVDKAVADYVRVFLTHVIQDGLLQPIYQEIIFLQNQFKEVPTLQHVLQNPTVFTAEKRRLLGLLYRSDTPPILKKFIDFLVNQRQASQLRAMLYAFEKAYHVYRGVQSVVLTTAVALPEDCVEKLMEKVKKRFSCKEIKLTQQIDPSVMGGYKLQIGTLQWDKTIKHSLYALQKHLVKGI
SIO_010081: DK880_RS01625
subclass of: SO_0000673
so part of: DK880_RS01625
location: complement(437215..437805)
location: region:437215-437805:-1
so has part: feature:437215-437805:-1:exon

WP_162534103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:437215-437805:-1:exon

DK880_RS01630
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: atpF
locus tag: DK880_RS01630
old locus tag: DK880_00326
so part of: sequence
location: complement(437798..438298)
location: region:437798-438298:-1
so has part: feature:437798-438298:-1:exon
subclass of: SO_0000010

position:437798:-1
position: 437798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438298:-1
position: 438298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437798-438298:-1:exon

DK880_RS01630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: atpF
locus tag: DK880_RS01630
old locus tag: DK880_00326
EC number: 7.1.2.2
inference: COORDINATES: protein motif:HMM:TIGR01144.1
GO component: GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
GO function: GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit B
translation: MNYLITPDFGILFWQTITLLTVLWVLAKFAWKPIIGVLQAREEAVAHSISQISAAQTSMAQAVVERERLLEEANLERERIISESLETKQKIIEQARQEGITLKEQLLAEARLALEREEKRVLEEAKSHIGLLSIQIAEKLLCSELRKDQEQLALIERFITGEKQFA
SIO_010081: DK880_RS01630
subclass of: SO_0000673
so part of: DK880_RS01630
location: complement(437798..438298)
location: region:437798-438298:-1
so has part: feature:437798-438298:-1:exon

WP_109997097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:437798-438298:-1:exon

DK880_RS01635
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: atpE
locus tag: DK880_RS01635
old locus tag: DK880_00327
so part of: sequence
location: complement(438360..438593)
location: region:438360-438593:-1
so has part: feature:438360-438593:-1:exon
subclass of: SO_0000010

position:438360:-1
position: 438360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438593:-1
position: 438593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438360-438593:-1:exon

DK880_RS01635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: atpE
locus tag: DK880_RS01635
old locus tag: DK880_00327
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019596619.1
GO component: GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
GO function: GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP synthase F0 subunit C
translation: MLDISSSYAYAGAGIGVGIVVLGAAIGIGKIGHAAMEAISRQPEISGQVRAAMIIACSLIEGAALFAILVCLLIVLK
SIO_010081: DK880_RS01635
subclass of: SO_0000673
so part of: DK880_RS01635
location: complement(438360..438593)
location: region:438360-438593:-1
so has part: feature:438360-438593:-1:exon

WP_109997098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:438360-438593:-1:exon

DK880_RS01640
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: atpB
locus tag: DK880_RS01640
old locus tag: DK880_00328
so part of: sequence
location: complement(438669..439574)
location: region:438669-439574:-1
so has part: feature:438669-439574:-1:exon
subclass of: SO_0000010

position:438669:-1
position: 438669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439574:-1
position: 439574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438669-439574:-1:exon

DK880_RS01640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: atpB
locus tag: DK880_RS01640
old locus tag: DK880_00328
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012472285.1
GO component: GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
GO function: GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit A
translation: MEHVTDAHDWHFATVGQYHVTLPLPIILYSRDRGMECFSSARFYDHQQHAVPFRGYRMVSNTICCVDASRSVVDLSITKNIAAMLGSILLLVAVLLVAARKYQRTACLVPSGFMAFVDLIVSFIKDEIAIPNIGRRHYERFLPYLLTVFCFIWLNNLLGLLPGGANVTGNISVTLVLAAFTIVLTIINGNKQYWSHIFKPAEVPKWLWPIMVPLEMVGIFTKFFSLMVRLFANITAGHIILLSIIGLVFSLKSIWVGFAVTLPFSTFMFLLKLVVAVLQAYVFTLLSAIYLGQAVAEKGCH
SIO_010081: DK880_RS01640
subclass of: SO_0000673
so part of: DK880_RS01640
location: complement(438669..439574)
location: region:438669-439574:-1
so has part: feature:438669-439574:-1:exon

WP_239302534.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:438669-439574:-1:exon

DK880_RS01645
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01645
old locus tag: DK880_00329
so part of: sequence
location: complement(439913..442000)
location: region:439913-442000:-1
so has part: feature:439913-442000:-1:exon
subclass of: SO_0000010

position:439913:-1
position: 439913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442000:-1
position: 442000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439913-442000:-1:exon

DK880_RS01645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01645
old locus tag: DK880_00329
inference: COORDINATES: protein motif:HMM:NF025486.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative porin
translation: MYTMLANPTRRWYSYLLLILALPFKSFAAKPEDIFEQPTEDKVKANTTFFITPRDIKYNRNQYKPIEVSLAKMDRFMVVEQHNYLLQNLGNNWTATQYIPYRLPQRIGATDGISVYDFNFHQPQDIRYYCMPKSKAYTYFNVVLANIGSFVFDGCYSQRLLDNWFAGINLYGAMTENEWPQMHKEDKKIVDAFPQFDIFTHFHLLDSAYYACTSYSIMNYRTKETGGVQLNKKEESYPADPLNRCRYFRKFLDEKGIQARISLNGENQVQHDDKRRHFYFFHQYHFSAGIQCYHEFSYSCKNNKSNIACKEENARFIAPISKSTEDHLPAIESKVLLNVRHNEIGVKGRIASIDVDYNVHARLENIHFEQDFSNPLEKATTPFLLADVGKKNKGNKEDEFYLGGHLQWDLTQRMRHQFQLEGEYGWAGAGYYTLMLAYQNRFFKLVCDTLKHKVPYLVQHGYFPYRHWPKTYKAPATQQLAAAFTCKLLPWVRVEPMVTLQRMHNLIYYKEWIGDNEIKKDSDVHCISVPSQVADPIDLCSYGGHLDVSFSYFHIDNTLFFLKDISNLKPKIYKGRMPWYSYTGRYYFAHQPYEKKMAIEIGINVHKKALHYADGYDIIAQRFYKQQRFAVQGCPIVDFFVNYRLSNIKISIKFSCINDYFGDEKGGKGKSYFATPFYPGQKPAADIGVHWSFFD
SIO_010081: DK880_RS01645
subclass of: SO_0000673
so part of: DK880_RS01645
location: complement(439913..442000)
location: region:439913-442000:-1
so has part: feature:439913-442000:-1:exon

WP_109997100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439913-442000:-1:exon

DK880_RS01650
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: ychF
locus tag: DK880_RS01650
old locus tag: DK880_00330
so part of: sequence
location: complement(442023..443105)
location: region:442023-443105:-1
so has part: feature:442023-443105:-1:exon
subclass of: SO_0000010

position:442023:-1
position: 442023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443105:-1
position: 443105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442023-443105:-1:exon

DK880_RS01650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: ychF
locus tag: DK880_RS01650
old locus tag: DK880_00330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010608224.1
GO function: GO:0005525 - GTP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: redox-regulated ATPase YchF
translation: MALKCGIVGLPNVGKSMLFNALSNGNAASANFPFCTIEPNRGVVVVPDKRIKLLSTWAQSKRSVPTTIEFVDIAGLVQGAHEGEGLGNQFLGHIREVDAIVHVIRCFEEENVLHVAGGVDPLFDKEIIEHELRCKDIDTLTKRLEKAEKLAKQGGAADQQEVMGLQHLLQALKQGRDIRCVPIENAVQNAWQLLTAKPVVYFANVDEATLLGKENTHMVALQEAIVDAELIVGCAALEAQFNLLTDEEQRFFLAEYNLTEPGLHKLIQSVYALLQLITYFTVGPEEVRAWTIQKGSKAPQAAGMIHTDFKRGFIKAEVISFQDYQTYKSESACRDAGKLRIEGKDYVVQDGDVLLFRFNV
SIO_010081: DK880_RS01650
subclass of: SO_0000673
so part of: DK880_RS01650
location: complement(442023..443105)
location: region:442023-443105:-1
so has part: feature:442023-443105:-1:exon

WP_109997101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442023-443105:-1:exon

DK880_RS01655
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01655
old locus tag: DK880_00331
so part of: sequence
location: complement(443188..443490)
location: region:443188-443490:-1
so has part: feature:443188-443490:-1:exon
subclass of: SO_0000010

position:443188:-1
position: 443188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443490:-1
position: 443490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443188-443490:-1:exon

DK880_RS01655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01655
old locus tag: DK880_00331
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011585600.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3276 family protein
translation: MESRTELDEIYSKRVNAGKRVYFFDIKSTRSKDYYLTITESKKRTEEDGMFYEKHKIFLYKEDVNKFVRALNEVVHHLKTNLMSDYAFDKNDRDTESYQK
SIO_010081: DK880_RS01655
subclass of: SO_0000673
so part of: DK880_RS01655
location: complement(443188..443490)
location: region:443188-443490:-1
so has part: feature:443188-443490:-1:exon

WP_109997102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:443188-443490:-1:exon

DK880_RS01660
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01660
old locus tag: DK880_00333
so part of: sequence
location: complement(443701..444042)
location: region:443701-444042:-1
so has part: feature:443701-444042:-1:exon
subclass of: SO_0000010

position:443701:-1
position: 443701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444042:-1
position: 444042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443701-444042:-1:exon

DK880_RS01660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01660
old locus tag: DK880_00333
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010608221.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4Fe-4S dicluster domain-containing protein
translation: MALRITDACINCGACAVECPNTAIYEGGVPWQWAEGTQLKEVLIEGKKVDATLPQPPYTEDVFYIVTDKCTECVGFHDEPQCSAVCPVDCCVLDLDHTETQEELLAKKQFLHG
SIO_010081: DK880_RS01660
subclass of: SO_0000673
so part of: DK880_RS01660
location: complement(443701..444042)
location: region:443701-444042:-1
so has part: feature:443701-444042:-1:exon

WP_109997103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:443701-444042:-1:exon

DK880_RS01665
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: greA
locus tag: DK880_RS01665
old locus tag: DK880_00334
so part of: sequence
location: complement(444128..444598)
location: region:444128-444598:-1
so has part: feature:444128-444598:-1:exon
subclass of: SO_0000010

position:444128:-1
position: 444128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444598:-1
position: 444598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444128-444598:-1:exon

DK880_RS01665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: greA
locus tag: DK880_RS01665
old locus tag: DK880_00334
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934714.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO process: GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription elongation factor GreA
translation: MTYYTEEGLDQLKKELSFLKGEARIRVAHDIAEACKKGDLSENAEYDAAREAQGLLEAKIAALENLVASARVLNLGEIDLSRVSILSKACVKNRKTGMESVFMLVSQGEADLKQSKISVDSPIGKGILGKKVGDIAMIDAPAGIIELEILKIGLDL
SIO_010081: DK880_RS01665
subclass of: SO_0000673
so part of: DK880_RS01665
location: complement(444128..444598)
location: region:444128-444598:-1
so has part: feature:444128-444598:-1:exon

WP_109997104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444128-444598:-1:exon

DK880_RS01675
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01675
pseudo: true
so part of: sequence
location: complement(<445634..>445759)
location: region:445634-445759:-1
so has part: feature:445634-445759:-1:exon
subclass of: SO_0000010

position:445634:-1
position: 445634
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:445759:-1
position: 445759
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445634-445759:-1:exon

DK880_RS01675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012736482.1
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: integrase core domain-containing protein
SIO_010081: DK880_RS01675
subclass of: SO_0000673
so part of: DK880_RS01675
location: complement(<445634..>445759)
location: region:445634-445759:-1
so has part: feature:445634-445759:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:445634-445759:-1:exon

DK880_RS01680
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01680
old locus tag: DK880_00335
so part of: sequence
location: 445968..447209
location: region:445968-447209:1
so has part: feature:445968-447209:1:exon
subclass of: SO_0000010

position:445968:1
position: 445968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447209:1
position: 447209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445968-447209:1:exon

DK880_RS01680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01680
old locus tag: DK880_00335
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFNTILVKRLLRYAFFYSLPLSLMHCSSCKRTVHKSNTLPSFLEKKERNENTAQQPSPLYTSSAPAGTAKEIIILPGLATATPTGTGKTATPEAPLEIPDTSSGATRSKADSKSKYNAESEHRTDSELESRPINKRRNNSGSPNNKTNEEEIPNTSSRLTGSKADSKSKYNSESENRTNSESENRTNLESENKPKLSESNANTRQRNNSGSSNDDDNDPPPTRFDHSFTPSKPKRRLTKTQRDQTNRHKPRQRTNSDSPKNHENDNPPTPSRQKPKHSRLTKTQTKEATPPTSMSLNESIPPQQKDPNLSVLLNNTRPEVSSLCVEASAPPLYHQIPLVPYPEMPASSFMPMSQNHQNLTPTQGPLYPTLPAPSSLYQPPCNPTYNALSTRPPLSNESLSKNPLPQDPPPYSR
SIO_010081: DK880_RS01680
subclass of: SO_0000673
so part of: DK880_RS01680
location: 445968..447209
location: region:445968-447209:1
so has part: feature:445968-447209:1:exon

WP_162534104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:445968-447209:1:exon

DK880_RS01685
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01685
old locus tag: DK880_00336
so part of: sequence
location: complement(447370..447441)
location: region:447370-447441:-1
so has part: feature:447370-447441:-1:exon
subclass of: SO_0000663

position:447370:-1
position: 447370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447441:-1
position: 447441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447370-447441:-1:exon

DK880_RS01685
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 247481
locus tag: DK880_RS01685
old locus tag: DK880_00336
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(447406..447408),aa:Glu,seq:ttc)
SIO_010081: DK880_RS01685
subclass of: SO_0000673
so part of: DK880_RS01685
location: complement(447370..447441)
location: region:447370-447441:-1
so has part: feature:447370-447441:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:447370-447441:-1:exon

DK880_RS01690
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01690
old locus tag: DK880_00337
so part of: sequence
location: complement(447586..448377)
location: region:447586-448377:-1
so has part: feature:447586-448377:-1:exon
subclass of: SO_0000010

position:447586:-1
position: 447586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448377:-1
position: 448377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447586-448377:-1:exon

DK880_RS01690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01690
old locus tag: DK880_00337
inference: COORDINATES: protein motif:HMM:NF024895.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: porin family protein
translation: MKGIKKTLVAGALACATLNAAQAECSPWSYGVKAGLSVSSICGIDEKVRFVVGAKEEGFENPMFALPFVNGFVYGEYAFTDYIGMELGAGYMQLGGTLCKKEDNSASANNNNSNNSGSKSEPACKIASHGLYVPLSLCVYPMGREEGEGIFKLFVGTSAYFSMKKVLKFKETGKDTYEENPELNKVDLETFDVGVQGGIGYEFSFGLSLEARYGHHFMNRIKDNSTTKPDDQFAKVKINGLTKVNNRYFMVNVGYNIASLFKA
SIO_010081: DK880_RS01690
subclass of: SO_0000673
so part of: DK880_RS01690
location: complement(447586..448377)
location: region:447586-448377:-1
so has part: feature:447586-448377:-1:exon

WP_109997107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:447586-448377:-1:exon

DK880_RS01695
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: tsaB
locus tag: DK880_RS01695
old locus tag: DK880_00338
so part of: sequence
location: complement(448913..449581)
location: region:448913-449581:-1
so has part: feature:448913-449581:-1:exon
subclass of: SO_0000010

position:448913:-1
position: 448913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449581:-1
position: 449581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448913-449581:-1:exon

DK880_RS01695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: tsaB
locus tag: DK880_RS01695
old locus tag: DK880_00338
EC number: 2.3.1.234
inference: COORDINATES: protein motif:HMM:TIGR03725.1
GO function: GO:0003725 - double-stranded RNA binding [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
translation: MVLILSIETATAACSVALHNQGHLVAHTTLVQRYTHVESLMVIVEELLEISKYNRKDLAAVAIASGPGSYTGLRIGAAVGKGLCYGLGIPLIAVPTLVAMAAGIAPCIVDKTVLLCPALDARRNAIYTLIVDRSGQIKQDTHVALVDSSAYLASLPQQPLLFLGDGALKCKPYLVKRSDIHYAEAVMPSAVHIGPLAFARFQQQCWEDIAHYVPCYLSQFQS
SIO_010081: DK880_RS01695
subclass of: SO_0000673
so part of: DK880_RS01695
location: complement(448913..449581)
location: region:448913-449581:-1
so has part: feature:448913-449581:-1:exon

WP_109997108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:448913-449581:-1:exon

DK880_RS01700
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01700
old locus tag: DK880_00339
so part of: sequence
location: complement(449590..450498)
location: region:449590-450498:-1
so has part: feature:449590-450498:-1:exon
subclass of: SO_0000010

position:449590:-1
position: 449590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450498:-1
position: 450498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449590-450498:-1:exon

DK880_RS01700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01700
old locus tag: DK880_00339
inference: COORDINATES: protein motif:HMM:NF024271.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3822 family protein
translation: MEIFPKKLLSVVDTKQFRPDKSTHYHLLINIGAGLIKIGCLDKDAQACLLLDVYALPVNKQHPSYIQCLAQLYNETFFLIKQDWYSVTLSITNQKFTLLPHLLLSPKDLMAYMHVVCNVASSEEVAVFTHALAKLSVVFAEEATVLDWFRKRYSNSRFQIIHQVNAMIEGIQLEYPVSVVPLLFIWLDKNHMHIAAHENGKLVYYNIFAYETAEDCLSYLSAVVQVIRFERHSGKAWVGGYIDKASSFYWQLKAYIPHVTLKTKIHFLPSPNRLFKKSNPSPMLYFDLMSSLLCQPYGKNKT
SIO_010081: DK880_RS01700
subclass of: SO_0000673
so part of: DK880_RS01700
location: complement(449590..450498)
location: region:449590-450498:-1
so has part: feature:449590-450498:-1:exon

WP_109997109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:449590-450498:-1:exon

DK880_RS01705
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01705
old locus tag: DK880_00340
so part of: sequence
location: 450688..451038
location: region:450688-451038:1
so has part: feature:450688-451038:1:exon
subclass of: SO_0000010

position:450688:1
position: 450688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451038:1
position: 451038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450688-451038:1:exon

DK880_RS01705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01705
old locus tag: DK880_00340
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKYITAIAILTGLLGIGMPCPMPSAATASAPLNETLFIQITRDMELLNSWLVTQHYPPETSAHIQHQSYQSLLALYKVDLEAYQASIAYYFTSSLEKALETYGKLYIALEKVRTAC
SIO_010081: DK880_RS01705
subclass of: SO_0000673
so part of: DK880_RS01705
location: 450688..451038
location: region:450688-451038:1
so has part: feature:450688-451038:1:exon

WP_109997110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:450688-451038:1:exon

DK880_RS01710
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: gyrB
locus tag: DK880_RS01710
old locus tag: DK880_00341
so part of: sequence
location: 451118..453067
location: region:451118-453067:1
so has part: feature:451118-453067:1:exon
subclass of: SO_0000010

position:451118:1
position: 451118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453067:1
position: 453067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451118-453067:1:exon

DK880_RS01710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: gyrB
locus tag: DK880_RS01710
old locus tag: DK880_00341
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934671.1
GO component: GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO function: GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase (ATP-hydrolyzing) subunit B
translation: MTSTTNDYSADHIQVLEGLEAVRKRPAMYIGDIGIKGLHHLIWEVVDNAIDESLAGYCNSIAITIQEDNSITVSDNGRGIPTEIHSKEKKSALEIVMTVLHAGGKFDKNSYKVSGGLHGVGVSCVNALSSHLQVTVYRNGKIYQQTYAQGTPLHAVQAIGATDLRGTTVHFTPDSTIFTTTVYNAHTIANRLQELAYLNLGLRITLEDKRERNESQEPFKQTFYSKEGLRAFVLHLSSGKEFIMPEPILIEGTKNNVAVQVAMTYNTGYSETVASYVNNIPTIEGGMHVTGFKRALTRTLKNYADKSNLLEKAKVEIIGDDFREGLTAVISVKVAEPQFEGQTKAKLGNAEVQGAVESCVAETLYYYLEEHPKEAKYIIDKVIIAAQARQAARKAREIIQRKNVLVGSSLPGKLADCSERDPKLCELFLVEGDSAGGTAKMGRNRRFQAILPLKGKILNVEKAQLYKIYDNEQIRNMITALGITLGKDIEDKPMDLDKLRYHKIVIMTDADVDGSHIRTLILTFFFRYMRDVIEQGHLYIASPPLYLVKRDKTEQYCWTESEKEQNIIKLSAKDGKVDAVVVQRYKGLGEMNEIQLWDTTMDPTRRNLKQVSIASALAAEHLFSMLMGDEVPPRRDFIKRYAKYAKLDI
SIO_010081: DK880_RS01710
subclass of: SO_0000673
so part of: DK880_RS01710
location: 451118..453067
location: region:451118-453067:1
so has part: feature:451118-453067:1:exon

WP_109997111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:451118-453067:1:exon

DK880_RS01715
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: pth
locus tag: DK880_RS01715
old locus tag: DK880_00342
so part of: sequence
location: 453113..453682
location: region:453113-453682:1
so has part: feature:453113-453682:1:exon
subclass of: SO_0000010

position:453113:1
position: 453113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453682:1
position: 453682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453113-453682:1:exon

DK880_RS01715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: pth
locus tag: DK880_RS01715
old locus tag: DK880_00342
EC number: 3.1.1.29
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015268293.1
GO function: GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminoacyl-tRNA hydrolase
translation: MKLLLIGLGNIGAAYTYTRHNMGFLVLDHLAKQQKVFFQANHLAFTATFTYQQQQVYLIKPTTYVNNSGQAVKHWLNALQLPITQSLTVVDDYGLPFGTMRLRNKGSHAGHNGLKNIAACLLSTDYPRLRIGIGSDFPKGGLADFVLGHFTRKEETALPDCLDQAAEIALTWCRTGMVYAMNQFNNRTK
SIO_010081: DK880_RS01715
subclass of: SO_0000673
so part of: DK880_RS01715
location: 453113..453682
location: region:453113-453682:1
so has part: feature:453113-453682:1:exon

WP_109997112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453113-453682:1:exon

DK880_RS01720
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: hslV
locus tag: DK880_RS01720
old locus tag: DK880_00343
so part of: sequence
location: complement(453736..454293)
location: region:453736-454293:-1
so has part: feature:453736-454293:-1:exon
subclass of: SO_0000010

position:453736:-1
position: 453736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454293:-1
position: 454293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453736-454293:-1:exon

DK880_RS01720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: hslV
locus tag: DK880_RS01720
old locus tag: DK880_00343
EC number: 3.4.25.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013926011.1
GO function: GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]
GO process: GO:0051603 - proteolysis involved in protein catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent protease subunit HslV
translation: MLPLHATTVLVVLHKGSVVIGSDGQATLGNTIAKHNVKKVRKLFKGSVLAGFAGSTADAFTILERFEEKLQGYRGNIKRAAIELAKDWRTDRMLKRLEAMLLVANQEDLLMISGNGDVLEPDYPVAAIGSGSVYAQSAARALVQHAPHLTAMEIVRESLTIAADICIYTNHNFVFEELNETEKQL
SIO_010081: DK880_RS01720
subclass of: SO_0000673
so part of: DK880_RS01720
location: complement(453736..454293)
location: region:453736-454293:-1
so has part: feature:453736-454293:-1:exon

WP_109997696.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453736-454293:-1:exon

DK880_RS01725
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01725
old locus tag: DK880_00344
so part of: sequence
location: complement(454352..455587)
location: region:454352-455587:-1
so has part: feature:454352-455587:-1:exon
subclass of: SO_0000010

position:454352:-1
position: 454352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455587:-1
position: 455587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454352-455587:-1:exon

DK880_RS01725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01725
old locus tag: DK880_00344
EC number: 2.3.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934203.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydrolipoamide acetyltransferase family protein
translation: MAELIRMPKMSDTMQQGVISRWLKQVGDKVEVGDILAEVETDKAVMELESYEEGVLLHVGVTAQSAVEVNALIAIIGEPGEDFQSLLQDTTACTLPPMPAPDRLPSKGLEPVTVAAQVNEKQTAKDRIFASPLAKRLAKEKGCVLANIPGSGEGGRIIKQDVLDFIVDQEAIATSTKSTHLWHEQESYQDRPLTALRQKMATVLTAHKAAAPHFYVTIQLQMHKMVALRSELNVHADTKISINDLMIKAVALALRQHPTLNAAWLTDKIRYYQHVHMGVAVTVEEGIMVPVIRFADQKPVMAISKEMKHLSIKAKENKMIWQESSGATFTLSNLGMFGIESFTAIINPPAACILAVGAIQQSPVVQDQQVVVAPIMKVTLSCDHRVVDGAAAALFLATLKELVEEPLRLLL
SIO_010081: DK880_RS01725
subclass of: SO_0000673
so part of: DK880_RS01725
location: complement(454352..455587)
location: region:454352-455587:-1
so has part: feature:454352-455587:-1:exon

WP_109997113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:454352-455587:-1:exon

DK880_RS01730
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: tilS
locus tag: DK880_RS01730
old locus tag: DK880_00345
so part of: sequence
location: 455718..457094
location: region:455718-457094:1
so has part: feature:455718-457094:1:exon
subclass of: SO_0000010

position:455718:1
position: 455718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457094:1
position: 457094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455718-457094:1:exon

DK880_RS01730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: tilS
locus tag: DK880_RS01730
old locus tag: DK880_00345
EC number: 6.3.4.19
inference: COORDINATES: protein motif:HMM:TIGR02432.1
GO function: GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA lysidine(34) synthetase TilS
translation: MELCLLIWLTFILHFLHAMLTAFLSFLQKEQLVTNQTEATLLAVSGGVDSVVLCHLFKEAHLPFAIAHCHFNLRGKEADQASQLVASLAAHYQVPYYTTQFETKSFAAKHKISIQMAARTLRYHFFHQLLYKQKLAQIATAHHWDDAVETMLLNLIKGSGIRGLCGIQPIHGSIIRPLLFANKKDIIAYAKQASLTWQEDSSNQALYYQRNFIRHKIIPLLQQINPNFSITLKETALKLNDVRKIFAHHIALAQTNNTITDEDSHCIPIHTITALPGATTTAFELVRSYGFTFKQIQSLMEKPTGSGKRIYSTDYILYVDRQKWFICKQQKAAGRQAAIEANTPCIAYANHTFYLTQHNQNGYTIPKAANVAALAYHKLAFPLTLRPWQAGDYFYPLGMQGRKKLSDYFIDLKVAMVVKEKILVLTSNQQIAWVVGYRIDQRFCIDNQTETIFEITLT
SIO_010081: DK880_RS01730
subclass of: SO_0000673
so part of: DK880_RS01730
location: 455718..457094
location: region:455718-457094:1
so has part: feature:455718-457094:1:exon

WP_109997114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:455718-457094:1:exon

DK880_RS01735
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: ileS
locus tag: DK880_RS01735
old locus tag: DK880_00346
so part of: sequence
location: complement(457140..460442)
location: region:457140-460442:-1
so has part: feature:457140-460442:-1:exon
subclass of: SO_0000010

position:457140:-1
position: 457140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460442:-1
position: 460442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457140-460442:-1:exon

DK880_RS01735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: ileS
locus tag: DK880_RS01735
old locus tag: DK880_00346
EC number: 6.1.1.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009194058.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isoleucine--tRNA ligase
translation: MNLYRIHTPFHLQTIATAIKSFWEKEKIFERSLQQRKNKDPFVFFEGPPGANGKPGIHHVLSMVVKDLFTRYKTMQGYYVQRKSGWDTHGLPVELQVEKELGITKEDIGKKISIQAFNQKCQEAVMTYTSHWEALNRTLGYWKDNTAPYITYSRDYMESVWYLLKALYNKGLLYKGYAIQPYSPAAGSGLSSHELNQPGCYKQVEDLSVVAQFKILDREHDYFLAWTTTPWTLPANTALAVGLSISYVKVATINPYTHLPLQVVLAEEALGRFFSDKEEDTLPLSYGAAGHLPWRIVERCKGVDLIGLRYEQLLPYVQPKGDAFKVIGGDFVTTTEGTGIVHIAPTFGADDYRIAQEENIAAIVVTNEAGEELPIVDKMGRFVSAITDFAGRCVKVEYEKNTTLPSVDILIVNKLKQENKAFKVEKYTHSYPHCWRTQKPILYYPLDAWFIKTTAYKALLIELNNKIQWKPNSIGKGRFGNWLMHLVDWNLSRERYWGTPLPIWRTVDQKEEKCIGSVSELLFEMEQAALAGYMQQPLPEILDLHRPYVDAIVLVSSSGLPMYRETAVVDVWFDSGAMPCAQWHYPFENQENFFKNFPADFIAEGIDQTRGWFFTLHAISGLLFETAAFKNVVVNGLVLDKQGDKMSKSLHNTLDPMVLLDQYGPDAVRWYMISNANPWDNLKFDGTGVEEVIRRFFITLNNCYNFFALYANLDHFYFERPVMDSNELDPMDQWLLARSHALIQTVTEAYNQYEPTVAARAIQDFVVDALSNWYIRLNRKRFWKNRQDQDKEVAYQTLYHCLITIAKLMAPIAPFYADYLYQSLNQVTKKETAASVHLLDFPEANIQLLDPVLERKMQQVQMIVSLAHALRKQHKIKVRQPLPSLTIVTTPQITAGCLASLEALIKAELNVKEVHYADDTSHLLHKQAKPHYPRLGKQYGNKMKQISQAIVALQAEAIATLERGEVYLLLVEDVTIPLTLADVLIHTNAVPGWCIAKEGTITIALDITLHTALQEEGFARELVHRIQQLRKTLNFEVQDKIVLTIQANVAMAQQAITAYKDYICAEAQAVALQFAAELLEGTALDINGIAMVLQLEKVIG
SIO_010081: DK880_RS01735
subclass of: SO_0000673
so part of: DK880_RS01735
location: complement(457140..460442)
location: region:457140-460442:-1
so has part: feature:457140-460442:-1:exon

WP_109997115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:457140-460442:-1:exon

DK880_RS01740
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: lpxD
locus tag: DK880_RS01740
old locus tag: DK880_00347
so part of: sequence
location: complement(460589..461590)
location: region:460589-461590:-1
so has part: feature:460589-461590:-1:exon
subclass of: SO_0000010

position:460589:-1
position: 460589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461590:-1
position: 461590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460589-461590:-1:exon

DK880_RS01740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: lpxD
locus tag: DK880_RS01740
old locus tag: DK880_00347
EC number: 2.3.1.191
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934403.1
GO function: GO:0016410 - N-acyltransferase activity [Evidence IEA]
GO process: GO:0009245 - lipid A biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase
translation: MMQWTIAELAARFHASLSGDDRTIVTHLCTLEEGSKGGLSFFSTPSYAAALYQTKASAVLVPKEWQCSLPITPTLLAVVDPYAAFCALVEEVAQKKIAVKEGIEFPSYIGEGTTVGENSYRGAFSYIGNHVVIGERVQIYPHVYIGDHVTIGADTILYSGAKVAAYTVIGRKCVLHAAAVVGNPGFGFQTLASGGYKRIPSIGRVVLADEVEIGAHTVIDAAMVGQTAIGQGSKIDNLVQVAHNVKIGKYGGIAAQVGIAGSTKIGDYCRLGGQTGIAGHLTLGNHVTALGRAGITRSFPKGAITLSGTPAFEHKRFLSCYARFKNLAKPLQT
SIO_010081: DK880_RS01740
subclass of: SO_0000673
so part of: DK880_RS01740
location: complement(460589..461590)
location: region:460589-461590:-1
so has part: feature:460589-461590:-1:exon

WP_239302535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:460589-461590:-1:exon

DK880_RS01745
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01745
old locus tag: DK880_00348
so part of: sequence
location: 461888..465382
location: region:461888-465382:1
so has part: feature:461888-465382:1:exon
subclass of: SO_0000010

position:461888:1
position: 461888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465382:1
position: 465382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461888-465382:1:exon

DK880_RS01745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01745
old locus tag: DK880_00348
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:solute symporter family protein
translation: MIQPDLVIIGMFLLLTLAIGFYYGRGILTFQDYAVGNRKITSTAITLSLLATIYGGRAIYDTLNFYYDIGVSAYIRDLFLPVIYFIFSRFVIVRMHEFIGHLSIAESMGSLYGSAVRVITGILGIMVAIVALIVQIRISLEITSLLFPEIKEISTYVIILSTLLWIGYTTVGGARSVAITDVYQFLLFGLCFPLLIFVFLYYAKGPLIKGQKIISIIHFQISKTHAQEMAKVLWYSCIISTGLFFNPACFHRFYMSASLTQARKVLNRSAIIRIFIPILFLMVLIALAAAGHTIQHNQNIIKYIIDCKYFPGLRAVLVTAIYALIMSTADSYLHIASVLSANDIWPVIAGLRKGSMQPSLKIARMASVLIGIVSLWAALYTATSNLTTLINKVHNLYGPIVGIPFFMTCLGFRPRTAAVLCSMGILTMVITIVHHIYYKGQDIPAHHMCIAMITSFLILLSIHYILPKLPHTGWVGMQDRSAWDLQNQITKRWWLARVQQFKMLFTRSYRATIFPIQERTFVAVGSYTILHAIIALCFIQRQYFLPYVYLYMAVMALGTILALYPALHAYQKGGTPFLHALWPMVLFVLLFIAPLQFAKLGHYSPMVCALLIASISLSIVLVSVEGSSILLLCALLIHRLLPPYVNFVDLFWGSLKHASVIELMLTTALVSITLVGFLLYKYLREKATAKLNIIELTRTYEQRISLEAIYSQAHWARLDATAGGNLLREMGDNLQKTLSPIARNDPHKIESEVALFNKKLQKFSDCLLWRAQEERSLKLNKKAIQPIPLELTILKVNQQILDLGEPLALLLRKQTDVAEIAVDPALLECLLLLNLWAISKSQHATDHIVTLTLAATTLQYGLATETAADLPSLTLPALAFYFSTDTSLPNLKPSYSIVGMNANTTLPASEVQFYQLESKQIVEAHGGYVEIIEIPTKVSCLYVFPLDGRKVMRFKTYDPADLVANTLAETAEGLAQEQELIGLLTAQTTLSAERIQQTIAFIKKAHGLVQRKSGSPYYTHPMAVAKLLLEATQDPDTILAGLLHDIVEDTPVTLSQLELMYGSEVAAVVDQVTHYNTNGYPWKLDKVANKNILHQCRDIRVVQVKLADRLHNMRTLSVRKPADQQRIAKESVAFYIPWGKSHKAPQQWLAEMQQICEGIIAKQL
SIO_010081: DK880_RS01745
subclass of: SO_0000673
so part of: DK880_RS01745
location: 461888..465382
location: region:461888-465382:1
so has part: feature:461888-465382:1:exon

WP_109997116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:461888-465382:1:exon

DK880_RS01750
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01750
old locus tag: DK880_00349
so part of: sequence
location: 465596..469078
location: region:465596-469078:1
so has part: feature:465596-469078:1:exon
subclass of: SO_0000010

position:465596:1
position: 465596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469078:1
position: 469078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465596-469078:1:exon

DK880_RS01750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01750
old locus tag: DK880_00349
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:solute symporter family protein
translation: MVRHIDFIIIGLSLIGTLVIGIYYGRGIKTFQDYAVGKRKMATSVIAISLIATMYGARILHAGLDVCYRQGFEALMRISVIIAVKLYFFSRFITPRMKEFMGHLSIAESMGSLYGSAARIITALLGIVLSIALLTVQIKVVLEIITVLFPEVVPFQTHSTILLTLLVMAYATFGGARAVAITDVYQFLLFGLCFPLLIFVLLFSTEDLATGWQKLTALPQFNPNKMYAAHTLTTLLSDFIFRHLLMLIPAYIQRFYMASSVGQVAKVLNKMAIAPCVIASLIFSVAVALHIRGDSIPSNQNVFHYILSLTYFPGMKGLLITAMLALLMSTADSVLHVASVLFTNDLWPFVTGFSKSHNGSLRMVRIASIGIGVISLLMVFYTTSILQLMYKMFYLYDPAVAVPFMLACWGFRPRSLAVLLVMGLNIIVATYFIFYQKQAVSANHVILSMIVSAGSLFALHYLLPKRPHTGWVGIPDSSAWDLQNQITKRWWLARMQRLKMLFTRSYRVNIFPTQERTFVAVGCYTIIHAIIALCFIQRQYFLPYVYLYMAVMALGTILALYPALHAYRKGGTPLLHNLWPMLLFLLLFIAPLQFAKLGHYSPMVCALLIASISLSIVLLSVECSSILLLCALLIHRFLLPIRFMDLFWESFRHASVIELVLATAVVASTLVGFVLYKYLRDKATAKLNIIELTRTYEQRISLEAIYSQAHWARLDATAGGTLLREMGHTLQETLFPIARNDPHKVENEITRFNKKLQKFSDCLAWRAQEERSLKLNKKAIQPIPLELTILKVNQQILDLGEPLALLLRKQTDVAEIAVDPALLECLFLLNLWAISKSQHATDHIVTLTLAATTLQYGLATETAADLPSLTLPALAFCFSTDTSLPNLKPSYSIVGMNANTTLPASEVQFYQLESKQIVEAHGGYVEIIEIPTKVSCLYVFPLDGRKVMRFKTYDPADLVANTLAETAESLAQEQELIGLLTEQTTLSAERIQQTIAFIKKAHGLVQRKSGSPYYTHPMAVAKLLLEATRDPDTILAGLLHDIVEDTPVTLSQLELMYGSEVAAVVDQVTHYNTNGYPWKLDKVANKNILHQCRDIRVVQVKLADRLHNMRTLSARKPIDQQRIAKETLAFYIPWGKSHKAPQQWLAEMQQICEGIIAKQL
SIO_010081: DK880_RS01750
subclass of: SO_0000673
so part of: DK880_RS01750
location: 465596..469078
location: region:465596-469078:1
so has part: feature:465596-469078:1:exon

WP_109997117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465596-469078:1:exon

DK880_RS05140
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05140
old locus tag: DK880_00350
so part of: sequence
location: 469292..469504
location: region:469292-469504:1
so has part: feature:469292-469504:1:exon
subclass of: SO_0000010

position:469292:1
position: 469292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469504:1
position: 469504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469292-469504:1:exon

DK880_RS05140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05140
old locus tag: DK880_00350
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVRHIDFIIIGLSLIGTLVIGIYYGRGIKTFQEYAVGNRKMATSVIAISLVATIYGGSHLGVGLWKRCFI
SIO_010081: DK880_RS05140
subclass of: SO_0000673
so part of: DK880_RS05140
location: 469292..469504
location: region:469292-469504:1
so has part: feature:469292-469504:1:exon

WP_162534105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469292-469504:1:exon

DK880_RS01755
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01755
old locus tag: DK880_00351
so part of: sequence
location: complement(469463..469855)
location: region:469463-469855:-1
so has part: feature:469463-469855:-1:exon
subclass of: SO_0000010

position:469463:-1
position: 469463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:469855:-1
position: 469855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469463-469855:-1:exon

DK880_RS01755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01755
old locus tag: DK880_00351
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIYSQQAYDKEIATLAKNIAEEATATGKLLWHLGNHLFGCPQDIDKQLAQISKKLKYHKVHYAYTSVPVYDQKGRPTKGAQPLKIAYQLIDVTLVEDIATIDQAKLSKGRFILATNQLDKAALPEANPQM
SIO_010081: DK880_RS01755
subclass of: SO_0000673
so part of: DK880_RS01755
location: complement(469463..469855)
location: region:469463-469855:-1
so has part: feature:469463-469855:-1:exon

WP_109997118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469463-469855:-1:exon

DK880_RS01760
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01760
old locus tag: DK880_00352
so part of: sequence
location: 470002..471768
location: region:470002-471768:1
so has part: feature:470002-471768:1:exon
subclass of: SO_0000010

position:470002:1
position: 470002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471768:1
position: 471768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470002-471768:1:exon

DK880_RS01760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01760
old locus tag: DK880_00352
inference: COORDINATES: protein motif:HMM:NF012869.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MSMKHLSIISFFWPHIRPYKWYYFVMLIAPFTASFYPFAYTYALKLFIDTMTIPPTLTYQSMMFPIGIFLTAQLTLELVWRINNFCEYKAAPYVRKSILIYAYDYIQYHAYSFFQDNLTGTIHSKIQGIVDGYDRLWDQLHRGLGLRILKSTINVGTLILINYEIGLFFLIWSILFIYSIYTCSLTLKRLSCESTESRHTVMGIIADNISNIMNILSFVTKAKEVQALDQNIVNDFIPKEMRVYQYSFKIKIIAGCLHLFLFTAILWYMIYLKIINTITVGDFAQLFGILLITSEEIWHITVSLQDFSHVIGNLKSGLSILWPCEKRVDVINPKTLKIKHPSLEFKNVYFNYKDQKSVFKNLSLRIKPGEKIGLVGHSGAGKSSLVNLILRYFDYERGIILIDSQNIQHVTEDSLRSQIAVIPQDISLFHRTLMENIRYGNLDATDEEVVEASKKAHMHNFISALPEQYNTYVGERGVKLSGGQRQRVAIARAILKDAPILILDEATSALDSQTENLIQDSLHWLLDQQKKTVIAIAHRLSTLKHMDRIIVLDHGKIVEQGTHEQLMEKPDNLYRELWELQENKHRLR
SIO_010081: DK880_RS01760
subclass of: SO_0000673
so part of: DK880_RS01760
location: 470002..471768
location: region:470002-471768:1
so has part: feature:470002-471768:1:exon

WP_109997119.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:470002-471768:1:exon

DK880_RS01765
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01765
old locus tag: DK880_00353
so part of: sequence
location: 471803..472438
location: region:471803-472438:1
so has part: feature:471803-472438:1:exon
subclass of: SO_0000010

position:471803:1
position: 471803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472438:1
position: 472438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471803-472438:1:exon

DK880_RS01765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01765
old locus tag: DK880_00353
EC number: 3.4.-.-
inference: COORDINATES: protein motif:HMM:NF014566.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CPBP family intramembrane metalloprotease
translation: MERIKKERYTLLAFALFPCMVWGVMTLGCIMIYDLNYPEFVSNHIYHITYLLRALVYLSLCSNLYKRWSPGFYDAHKKIYLRYSLLAIIAIVCGFFVKTRFWNYILDGCFVSPFIEEVIARFILYKARKHNWKLYAVVTVISSLAFSLMHIAYNASLHFNANIRTELGAHFVFGCILCSIFWFFPRLSLLISIHSISNLWGILATKLGYPW
SIO_010081: DK880_RS01765
subclass of: SO_0000673
so part of: DK880_RS01765
location: 471803..472438
location: region:471803-472438:1
so has part: feature:471803-472438:1:exon

WP_109997120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:471803-472438:1:exon

DK880_RS01770
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01770
so part of: sequence
location: 472621..472818
location: region:472621-472818:1
so has part: feature:472621-472818:1:exon
subclass of: SO_0000010

position:472621:1
position: 472621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472818:1
position: 472818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472621-472818:1:exon

DK880_RS01770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01770
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MENQIKNKRKKLVISFAGCTKRDKVDKNNSEKSDSNNRSFNPRQINNCGVYQAEHISSQLFYKFE
SIO_010081: DK880_RS01770
subclass of: SO_0000673
so part of: DK880_RS01770
location: 472621..472818
location: region:472621-472818:1
so has part: feature:472621-472818:1:exon

WP_109997121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:472621-472818:1:exon

DK880_RS01775
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01775
old locus tag: DK880_00355
so part of: sequence
location: complement(472945..473271)
location: region:472945-473271:-1
so has part: feature:472945-473271:-1:exon
subclass of: SO_0000010

position:472945:-1
position: 472945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473271:-1
position: 473271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472945-473271:-1:exon

DK880_RS01775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01775
old locus tag: DK880_00355
inference: COORDINATES: protein motif:HMM:NF013068.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MALESFTSKWNKQYPQIAKSWYANWNNLIVFLQYPNVIRSVIYTTNAIESVNSQFRRVTKNKRVFPNDIAVFKTLYLTINYITKKWTMPIKNWSEAMAHFLIKFEDRI
SIO_010081: DK880_RS01775
subclass of: SO_0000673
so part of: DK880_RS01775
location: complement(472945..473271)
location: region:472945-473271:-1
so has part: feature:472945-473271:-1:exon

WP_204082285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:472945-473271:-1:exon

DK880_RS01780
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01780
pseudo: true
so part of: sequence
location: complement(473498..>474155)
location: region:473498-474155:-1
so has part: feature:473498-474155:-1:exon
subclass of: SO_0000010

position:473498:-1
position: 473498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474155:-1
position: 474155
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473498-474155:-1:exon

DK880_RS01780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_034576516.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: DK880_RS01780
subclass of: SO_0000673
so part of: DK880_RS01780
location: complement(473498..>474155)
location: region:473498-474155:-1
so has part: feature:473498-474155:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:473498-474155:-1:exon

DK880_RS05530
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05530
old locus tag: DK880_00360
so part of: sequence
location: 475599..475916
location: region:475599-475916:1
so has part: feature:475599-475916:1:exon
subclass of: SO_0000010

position:475599:1
position: 475599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475916:1
position: 475916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475599-475916:1:exon

DK880_RS05530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05530
old locus tag: DK880_00360
inference: COORDINATES: protein motif:HMM:NF013698.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MQYIGIDIGKRNFIAAFPQDQGYRTITYKNEPKGIETFLAQLDKSADHCVLEATGNYGALLLQMLTGHGIVVSMVNPKQTKQFARMMLVVNKTDKVDAQLIALIS
SIO_010081: DK880_RS05530
subclass of: SO_0000673
so part of: DK880_RS05530
location: 475599..475916
location: region:475599-475916:1
so has part: feature:475599-475916:1:exon

WP_239302536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:475599-475916:1:exon

DK880_RS05535
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05535
old locus tag: DK880_00361
so part of: sequence
location: 475931..476512
location: region:475931-476512:1
so has part: feature:475931-476512:1:exon
subclass of: SO_0000010

position:475931:1
position: 475931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476512:1
position: 476512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475931-476512:1:exon

DK880_RS05535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05535
old locus tag: DK880_00361
inference: COORDINATES: protein motif:HMM:NF014430.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MSYNLLESFSVLPQVNNLAVETLKKTIACLEEQIRFLEQHMLSITKETYNALYKRISSIKGIGDSIALELIVATGGGQHFQSAKQFSKFIGLAPTYAHSGSSIRKKGPINRHGNARLRSLFYMASWSAIRFNKACKSFYQNLKARGKPGKVALIAVANKLIRQLFAILRDDTYYIDGYLSKPNVTVYQLERYF
SIO_010081: DK880_RS05535
subclass of: SO_0000673
so part of: DK880_RS05535
location: 475931..476512
location: region:475931-476512:1
so has part: feature:475931-476512:1:exon

WP_239302537.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:475931-476512:1:exon

DK880_RS05540
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05540
pseudo: true
so part of: sequence
location: complement(476568..477700)
location: region:476568-477700:-1
so has part: feature:476568-477700:-1:exon
subclass of: SO_0000010

position:476568:-1
position: 476568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477700:-1
position: 477700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476568-477700:-1:exon

DK880_RS05540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05540
inference: COORDINATES: protein motif:HMM:NF013068.2
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS256 family transposase
SIO_010081: DK880_RS05540
subclass of: SO_0000673
so part of: DK880_RS05540
location: complement(476568..477700)
location: region:476568-477700:-1
so has part: feature:476568-477700:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:476568-477700:-1:exon

DK880_RS01800
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01800
old locus tag: DK880_00365
so part of: sequence
location: complement(477808..478698)
location: region:477808-478698:-1
so has part: feature:477808-478698:-1:exon
subclass of: SO_0000010

position:477808:-1
position: 477808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478698:-1
position: 478698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477808-478698:-1:exon

DK880_RS01800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01800
old locus tag: DK880_00365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014935040.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MEKITPKVDLAFKKIFGVEENKDLLISLINATVSPEDQVVDVTLLNPYNPKDFRSAKLSILDIKAVGETGKRFNIEIQITDEADYDKRALYYWAKLYTDQLKVSEDYSTLNKAIGIHILNFISITDSNKYHNVFHITEKERGLPCFTDLELHTIELIKFSKGPKEDLDSLLKKVKNSLDIWTAFLTRHELLNKDNLPQPLANNSLKKALHVLDTMNFTDEERMAYEDHLKWLRIEANTLEKARREGMQIGEEKGMRIGKVAIAKAMLLKGYPMEDIVLLTGLPSSHIQDLIKEKSF
SIO_010081: DK880_RS01800
subclass of: SO_0000673
so part of: DK880_RS01800
location: complement(477808..478698)
location: region:477808-478698:-1
so has part: feature:477808-478698:-1:exon

WP_109997123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477808-478698:-1:exon

DK880_RS05145
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05145
old locus tag: DK880_00366
so part of: sequence
location: complement(479342..479491)
location: region:479342-479491:-1
so has part: feature:479342-479491:-1:exon
subclass of: SO_0000010

position:479342:-1
position: 479342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479491:-1
position: 479491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479342-479491:-1:exon

DK880_RS05145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05145
old locus tag: DK880_00366
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYYDSDPAYQVSVILHGKTRKTPWNLHQAYYSKEFLGFFYKDPWLPSTF
SIO_010081: DK880_RS05145
subclass of: SO_0000673
so part of: DK880_RS05145
location: complement(479342..479491)
location: region:479342-479491:-1
so has part: feature:479342-479491:-1:exon

WP_162534107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:479342-479491:-1:exon

DK880_RS01805
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01805
old locus tag: DK880_00368
so part of: sequence
location: 479858..480103
location: region:479858-480103:1
so has part: feature:479858-480103:1:exon
subclass of: SO_0000010

position:479858:1
position: 479858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480103:1
position: 480103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479858-480103:1:exon

DK880_RS01805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01805
old locus tag: DK880_00368
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLSLLNRFIEAMSDAFNMRIQNTARQTKTSLSELKEDQIKDIALLKEICSFKGLPEKFETDLERKLSQEQSNPITVSELWQ
SIO_010081: DK880_RS01805
subclass of: SO_0000673
so part of: DK880_RS01805
location: 479858..480103
location: region:479858-480103:1
so has part: feature:479858-480103:1:exon

WP_109997124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:479858-480103:1:exon

DK880_RS01810
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01810
old locus tag: DK880_00369
so part of: sequence
location: 480233..480574
location: region:480233-480574:1
so has part: feature:480233-480574:1:exon
subclass of: SO_0000010

position:480233:1
position: 480233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480574:1
position: 480574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480233-480574:1:exon

DK880_RS01810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01810
old locus tag: DK880_00369
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDTFLKDIWEKTKPLEFHTIASDSEIVSEIFQNEAIIRNLFINSFTGSVDKDKQLHFTRELTLHISMEEFQFLVDKVRTNNQNKSSYVAEIYVALKDKVVKVILKIFFIRWIK
SIO_010081: DK880_RS01810
subclass of: SO_0000673
so part of: DK880_RS01810
location: 480233..480574
location: region:480233-480574:1
so has part: feature:480233-480574:1:exon

WP_109997125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:480233-480574:1:exon

DK880_RS01815
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01815
old locus tag: DK880_00371
so part of: sequence
location: 480776..481261
location: region:480776-481261:1
so has part: feature:480776-481261:1:exon
subclass of: SO_0000010

position:480776:1
position: 480776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481261:1
position: 481261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480776-481261:1:exon

DK880_RS01815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01815
old locus tag: DK880_00371
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPKAKKAKRHRLRNKKPIAKLGYNTNNTESEIIAEKRTDRFQHEASNSTLVPDSFEYHFRVKKWEEEPNWLLTYFQNAKGADGRYRKANNTIENVTREKFRHDARPVGQIIQQPDRAKYFFTLGNPNTRSALAVLSDNNGNIKKQVLLRAYATYNGMQWRM
SIO_010081: DK880_RS01815
subclass of: SO_0000673
so part of: DK880_RS01815
location: 480776..481261
location: region:480776-481261:1
so has part: feature:480776-481261:1:exon

WP_109997126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:480776-481261:1:exon

DK880_RS01820
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01820
old locus tag: DK880_00372
so part of: sequence
location: complement(481458..482324)
location: region:481458-482324:-1
so has part: feature:481458-482324:-1:exon
subclass of: SO_0000010

position:481458:-1
position: 481458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482324:-1
position: 482324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481458-482324:-1:exon

DK880_RS01820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01820
old locus tag: DK880_00372
inference: COORDINATES: protein motif:HMM:NF013088.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DMT family transporter
translation: MCKNSHLFRNSYVRAVLWMQLSILTSCLNDVITKYLATRLPACQICFFRFCFGSLVLLPIGCYKYALTTTRFTLHLVRGFFLAVAMGLYCYGLAYVPMSTAIVIGFTNPVFVLILANIFLRENISWPIWLATLLSFVAIVIVFQPTMVNHYMAALACIAATVVFALLDVINKRYISREPMLALLFFSNAVAAFCIFPFAYLSWQKPTLVQLLSLGLLGIGSNLILYFLLRAFALAAVTALAPIKYTELLYSVLFGILFFNEWPLGTTYIGAACIIAATSFVAYYQNRL
SIO_010081: DK880_RS01820
subclass of: SO_0000673
so part of: DK880_RS01820
location: complement(481458..482324)
location: region:481458-482324:-1
so has part: feature:481458-482324:-1:exon

WP_109997127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:481458-482324:-1:exon

DK880_RS01825
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: trxB
locus tag: DK880_RS01825
old locus tag: DK880_00373
so part of: sequence
location: complement(482340..483275)
location: region:482340-483275:-1
so has part: feature:482340-483275:-1:exon
subclass of: SO_0000010

position:482340:-1
position: 482340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483275:-1
position: 483275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482340-483275:-1:exon

DK880_RS01825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: trxB
locus tag: DK880_RS01825
old locus tag: DK880_00373
EC number: 1.8.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017729876.1
GO function: GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin-disulfide reductase
translation: MDKQSVQLVVIGSGPAGYTAAIYAARAGLCPVLYQGPQPGGQLTLTGEVENYPGYRAGVQGPNMMEDLQAQAERFGTIIQEGSIATVDFSIYPRLLTTDRGETLRARSVVIATGASAKWLGLPSEKKLYGKGVSACAVCDGFFFKNETVVVVGGGDSAAEEALYLSKLCKKVYLLVRKDTMRASRIMQERLLQKSNIQLCFHTEVQEIIGEETVEAVQVIHTLSQTVSILAATGCFIAIGHVPNSKLFLPYLSVDSEGYIQVQLGTTHTNVAGVFAAGDVQDRYYRQAVTAAGTGCMAALDAERFLQANEW
SIO_010081: DK880_RS01825
subclass of: SO_0000673
so part of: DK880_RS01825
location: complement(482340..483275)
location: region:482340-483275:-1
so has part: feature:482340-483275:-1:exon

WP_109997128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482340-483275:-1:exon

DK880_RS01830
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01830
old locus tag: DK880_00374
so part of: sequence
location: complement(483291..484154)
location: region:483291-484154:-1
so has part: feature:483291-484154:-1:exon
subclass of: SO_0000010

position:483291:-1
position: 483291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484154:-1
position: 484154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483291-484154:-1:exon

DK880_RS01830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01830
old locus tag: DK880_00374
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014796981.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor RpoD/SigA
translation: MRQLKISKQITNRENQSLDKYLQEIGKVPLLSADEEVALSKRIKMGDRAAFERLTNANLRFVVSVAKQYQNQGLSLSDLINEGNLGLIKSAQRFDEKRGFKFISYAVWWIRQSILQALAEQARIVRLPLNRIGSLSKISRTFAHLEQKYEREPTVEELAEFLEIDAEEVRDALKMAGRPISVDAPFVQGEENSLLDVLESDVEKKPDSELMNDSLCKEIQRALVVLSARERDVLSYYFGLNSTEILTLEEIGARFGLTRERVRQVKEKAVKKLKASIGSEALKCYLG
SIO_010081: DK880_RS01830
subclass of: SO_0000673
so part of: DK880_RS01830
location: complement(483291..484154)
location: region:483291-484154:-1
so has part: feature:483291-484154:-1:exon

WP_109997129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:483291-484154:-1:exon

DK880_RS01835
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: pnp
locus tag: DK880_RS01835
old locus tag: DK880_00375
so part of: sequence
location: complement(484191..486359)
location: region:484191-486359:-1
so has part: feature:484191-486359:-1:exon
subclass of: SO_0000010

position:484191:-1
position: 484191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486359:-1
position: 486359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484191-486359:-1:exon

DK880_RS01835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: pnp
locus tag: DK880_RS01835
old locus tag: DK880_00375
EC number: 2.7.7.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013930258.1
GO function: GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
GO process: GO:0006402 - mRNA catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyribonucleotide nucleotidyltransferase
translation: MFRKVISKTITLPDHPLITIETGKLATQADGAVVVRVADTMLLATVVAKEHPNSEQGGFPLSIDYQEKFAASGKIPGGFFKREGRLGDHEIIIARLVDRALRPLFPKGFAHAVQVNIALISADDAVLPDAFAALAASAALAVSPIPFNGPISEVRVVRVKGKFVINPVASLVEQADINLIVAATDDSILMVEGEMLEVAEAEVVEAIRYAHTAIKWQCQVQRELMEAVGVTKQPFTPIDWLAAIDYPATLREAVYHAMYAVARKGIPSKILRREAFTAVLEAYKEQLAKDQQGEDIAAAQQQAWAFEIEKQVIRALVLEEGLRVDGRRHDQIRSIESEVDYLPAAHGSALFTRGETQSLTTVTLGSKLDEQIIDRAMEDGYSRFLLHYNFPAFSTKEIRPNRGPSRREIGHGNLAMRALKAVLPPDTENLYTIRIVSDILESNGSSSMATVCAGSLALMDAGIPIKSHVAGIAMGLITDPMTNQFAILSDILGDEDYVGDMDFKVTGTQEGITACQMDMKLAGISYQMLEQALLQAKAGRLHIFQKMTETIAVARSARKPHAPSVTTIEVDRELIGIIIGPGGKVIQEIQKESDTSITIVEKDKKGIVTIFASNQVLLEKAMSRIQTIVAKPVVGEVYTGKVKAVLNYGAFVEFMPGKDGLLHVSEVRWERIEDLEKVLEVGETLQVKLVGIDSKSGKYRLSRKVLLVPEGQGGIDQDPLID
SIO_010081: DK880_RS01835
subclass of: SO_0000673
so part of: DK880_RS01835
location: complement(484191..486359)
location: region:484191-486359:-1
so has part: feature:484191-486359:-1:exon

WP_109997130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:484191-486359:-1:exon

DK880_RS01840
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rpsO
locus tag: DK880_RS01840
old locus tag: DK880_00376
so part of: sequence
location: complement(486546..486830)
location: region:486546-486830:-1
so has part: feature:486546-486830:-1:exon
subclass of: SO_0000010

position:486546:-1
position: 486546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486830:-1
position: 486830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486546-486830:-1:exon

DK880_RS01840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rpsO
locus tag: DK880_RS01840
old locus tag: DK880_00376
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012926579.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S15
translation: MKLTNQPRQQKQALFKTFGHAHCEKDSGSPESQIALFTYRIKHLTEHLRLKGKDYAAKLGLLKLVGKRRRLLAYLKKEDLQRYRNVITSLGLRK
SIO_010081: DK880_RS01840
subclass of: SO_0000673
so part of: DK880_RS01840
location: complement(486546..486830)
location: region:486546-486830:-1
so has part: feature:486546-486830:-1:exon

WP_109997131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:486546-486830:-1:exon

DK880_RS01845
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: ffh
locus tag: DK880_RS01845
old locus tag: DK880_00378
so part of: sequence
location: complement(487089..488411)
location: region:487089-488411:-1
so has part: feature:487089-488411:-1:exon
subclass of: SO_0000010

position:487089:-1
position: 487089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488411:-1
position: 488411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487089-488411:-1:exon

DK880_RS01845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: ffh
locus tag: DK880_RS01845
old locus tag: DK880_00378
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010610805.1
GO component: GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO function: GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal recognition particle protein
translation: MFEHLSKNLEKAIKSLKGQNRITDINIAATVKEIRRSLVQADVHYKVAKQVTDAIKQKAIGTDILTAVSPGQLFTKLVQDALTDLMGGKHAEVNLTGNPAIILVAGLQGAGKTTLAGKLAYYYKKKNKTCCLVACDVYRPAAAEQLKQLGEQLSISVYSDPMAKDPVIIAQNALKEAKQQAVELVIIDTAGRLAIDEKMMQELQLLKKTLNPSETLFVVDAMTGQDAVATAQTFHERLHFDGVVLTKLDGDSRGGAALSIRNVVQKPIKFISTGEKMQDLDLFHPDRMASRILGMGDVISLVERAEQIYTEEQQRKLSQKIRSNQFNLEDLVHQVQQIKKMGNIKEMLAMLPVMGKTLQDFPLDEGLFGNVEVIIQSMTPKERQQPDSIDQQRKERIARGSGTSIQAVNQLLKNFNMLCKTMKKIGKEGPKFTLFGASKK
SIO_010081: DK880_RS01845
subclass of: SO_0000673
so part of: DK880_RS01845
location: complement(487089..488411)
location: region:487089-488411:-1
so has part: feature:487089-488411:-1:exon

WP_109997132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:487089-488411:-1:exon

DK880_RS01850
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01850
old locus tag: DK880_00379
so part of: sequence
location: complement(488619..489857)
location: region:488619-489857:-1
so has part: feature:488619-489857:-1:exon
subclass of: SO_0000010

position:488619:-1
position: 488619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489857:-1
position: 489857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488619-489857:-1:exon

DK880_RS01850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01850
old locus tag: DK880_00379
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934271.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pitrilysin family protein
translation: MISFEKFTLANGLQVVVHEEPNSHIAVVNVLYQVGARDESATQTGFAHLFEHFMFSGSYNIPSYDKPLQQVGGESNAYTTTDITNYYSLLPAVNVETACWLESDRMLGLAFDEKSLEIQKKVVVEEFKEHYLNQPYGDAWHHLMGMAYKVHPYQWPVIGKTVSHIERVTIEAVKDFFYKFYCPSNAVLVIAGKVKQQEIAQLCKKWFEPIPARHAYHRVLPQEPRQWEARRKVIEGAVPFPMLYKAYHMSGKGKKGYYAAEIVRTLLSEGKAALLQVDLVDDQALYTRIECYITDTLDPGLLVISGSPAPSVSLETAESALIATLQKLEAITATELEKAKNQIQAQMVYAQVSIVNRAQDLAMATLLGDTHLVNRSIDYVRAVTLEEVQAVGQEVLQECNCSTLYYQTISTT
SIO_010081: DK880_RS01850
subclass of: SO_0000673
so part of: DK880_RS01850
location: complement(488619..489857)
location: region:488619-489857:-1
so has part: feature:488619-489857:-1:exon

WP_109997133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:488619-489857:-1:exon

DK880_RS01855
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01855
old locus tag: DK880_00381
so part of: sequence
location: complement(490103..491095)
location: region:490103-491095:-1
so has part: feature:490103-491095:-1:exon
subclass of: SO_0000010

position:490103:-1
position: 490103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491095:-1
position: 491095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490103-491095:-1:exon

DK880_RS01855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01855
old locus tag: DK880_00381
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNKEVRRSNQSKGNYCVLLVAVSIVVVIFCTSCGVKSAFLAKRNDMMGRLLAASKENKGASAEAAMDDYMALSVLLDDSRKEKLEKSINKIEKVEEGIAFIEIHLVYQKLYEAWRKVLSPSEAAELKNKVESCSDQEKIDEQIKASLPNVLQDQIKDARVRSRLKILDIGELKKMLSAVRQKKLTVTEGNLKQIIDQESEKKEATIPTESTKKDDWGEKLPLKGVEREEFMRLIMQFCNADQKQLKALFYRAEAESIENFLYAFNNDGVFNLSERIDLLGTLSYLYKCDTKLCVKMCNDPGSLTTLDQFTIYRICPNLHLLTKLRDALS
SIO_010081: DK880_RS01855
subclass of: SO_0000673
so part of: DK880_RS01855
location: complement(490103..491095)
location: region:490103-491095:-1
so has part: feature:490103-491095:-1:exon

WP_109997134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:490103-491095:-1:exon

DK880_RS01860
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01860
old locus tag: DK880_00382
so part of: sequence
location: 491428..492597
location: region:491428-492597:1
so has part: feature:491428-492597:1:exon
subclass of: SO_0000010

position:491428:1
position: 491428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492597:1
position: 492597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491428-492597:1:exon

DK880_RS01860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01860
old locus tag: DK880_00382
inference: COORDINATES: protein motif:HMM:NF024206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MYPVTIYRLVGIAFKWLFCIGILLSQTFHYSQAALEKMHAPPTSPPPQQLILAIESNDVQKAAALIGDRQNINDTDFFGYSPLHYAVKRGKVPIVSLLIKAKALLNQVSIQHGNTPLLLAIETGHKKITSLLLTAGADTTIKNHLGYNALHLAIQHKREDLVQLLLEAAAPYNSCTPEGYTPLLLAIQAGSIPMIQQLVKRNNITDFQDKNGYNALHWAIKKQAKAIFTILVQSGKFNVQAVSQKGETPLHLIAANRNIHPSFLKQLLSVSVLQVNATDAAGSTPLHYAAAANHFKAVQGLVKHANIQVNQQNHAGQTALHYAVANNHVAMVKQLLTRVGSAVSLANKKGITPIEWAMRHKYTKIYRLLLAHISFIESEEMVDTDSYAQ
SIO_010081: DK880_RS01860
subclass of: SO_0000673
so part of: DK880_RS01860
location: 491428..492597
location: region:491428-492597:1
so has part: feature:491428-492597:1:exon

WP_109997135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:491428-492597:1:exon

DK880_RS01865
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01865
old locus tag: DK880_00383
so part of: sequence
location: 492629..493924
location: region:492629-493924:1
so has part: feature:492629-493924:1:exon
subclass of: SO_0000010

position:492629:1
position: 492629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493924:1
position: 493924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492629-493924:1:exon

DK880_RS01865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01865
old locus tag: DK880_00383
EC number: 2.1.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934738.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine hydroxymethyltransferase
translation: MMQPDPTVPLLIEKEKKRQESTLTLIASENFVSAQVAAATGSLLTNKYAEGLPGKRYYGGCHIIDEIESLAIERAKSLFKVAWANVQPHSGSQANAALMMAVLKPGDKILGFNLAHGGHLTHGSPVNFSGRLYQASFYGVNPDTGYIDWESVAKKAKKERPAIIICGASAYSRDWDYIQLRAIADEVAAFLWADISHPAGLISQGLLNDPFPYCHFVTTTTHKTLRGPRGGLLLMGQDFDNPFGKTNRNGLLHKMSALLDAAVFPGTQGGPLEHSIAAKAVAFYEAMTHSFKCYARQVQKNAHVMAQAFLDEGYSILSGGTDNHLLLLDLYKQNITGKQAETVLEQADIITNRNLVPFDKNTPQVTSGIRLGTAAVTTRGLKEKDMLLIVEWIDYLLKNKDKDSQIKKVKQMVNAYMCRFPLTTVDGSVTE
SIO_010081: DK880_RS01865
subclass of: SO_0000673
so part of: DK880_RS01865
location: 492629..493924
location: region:492629-493924:1
so has part: feature:492629-493924:1:exon

WP_109997136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:492629-493924:1:exon

DK880_RS01870
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01870
old locus tag: DK880_00384
so part of: sequence
location: complement(493969..494286)
location: region:493969-494286:-1
so has part: feature:493969-494286:-1:exon
subclass of: SO_0000010

position:493969:-1
position: 493969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494286:-1
position: 494286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493969-494286:-1:exon

DK880_RS01870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01870
old locus tag: DK880_00384
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: leucine-rich repeat domain-containing protein
translation: MLVKWIGRIWPELLCEVIQYTKYTNRTKTISKKLRITAKSTEEYTEEKLIRYYKKCFKKPQLLKSKHAGFLTHPAERNFSITTIDLAYNAIGSEGAKTLAATIKF
SIO_010081: DK880_RS01870
subclass of: SO_0000673
so part of: DK880_RS01870
location: complement(493969..494286)
location: region:493969-494286:-1
so has part: feature:493969-494286:-1:exon

WP_109997137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:493969-494286:-1:exon

DK880_RS01875
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01875
old locus tag: DK880_00385
so part of: sequence
location: 495158..496042
location: region:495158-496042:1
so has part: feature:495158-496042:1:exon
subclass of: SO_0000010

position:495158:1
position: 495158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496042:1
position: 496042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495158-496042:1:exon

DK880_RS01875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01875
old locus tag: DK880_00385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934622.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MEKITPKIDLAFKKIFGVEENKDLLIALINATVSPEDQVVDLTLLNPYNPKNFRSDKLSILDVKAIGETGKRFNIEIQITDEADYDKRALYYWAKLYTDQLKSSETYSSLNKAIGIHILNFISITDSNKYHNVFHIREQESGLPYFTDLELHTIELIKFSNDPKEDLETLLKKIKNSLDIWIAFLTRHDLLNKDNLPQPLNSNSLKKALHVLDTINFTAEERMAYEDRLKWLRIEANTLEKARNEGKAEGKAEGEMAKALSIAKAMLQHGYPIEAITSLTGLSTEQIKQITQYS
SIO_010081: DK880_RS01875
subclass of: SO_0000673
so part of: DK880_RS01875
location: 495158..496042
location: region:495158-496042:1
so has part: feature:495158-496042:1:exon

WP_109997138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:495158-496042:1:exon

DK880_RS01880
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01880
old locus tag: DK880_00386
so part of: sequence
location: 496296..497276
location: region:496296-497276:1
so has part: feature:496296-497276:1:exon
subclass of: SO_0000010

position:496296:1
position: 496296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497276:1
position: 497276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496296-497276:1:exon

DK880_RS01880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01880
old locus tag: DK880_00386
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014935040.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MEKITPKIDLAFKKIFGVEENKDLLIALINATVSPEDQVVDLTLLNPYNPKNFRSDKLSILDVKAIGETGKRFNIEIQITDEADYDKRALYYWAKLYTDQLKSSETYSSLNKAIGIHILNFISITDSNKYHNVFHIREQESGLPYFTDLELHTIELIKFSNDPKENLETLLKKIKNSLDIWIAFLTRHDLLNKDNLPQPLNSNSLKKALHVLDTINFTAEERMAYEDRLKWLRIEANTLEKARNEGKAEGKAEGKAEGKAEGKAEGIQEGIQEGIQIGQKKGKLEGEREKAFSIAKAMLQHGYPIEAITSLTGLSTEQIKQITQYS
SIO_010081: DK880_RS01880
subclass of: SO_0000673
so part of: DK880_RS01880
location: 496296..497276
location: region:496296-497276:1
so has part: feature:496296-497276:1:exon

WP_109997139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:496296-497276:1:exon

DK880_RS01885
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01885
old locus tag: DK880_00387
so part of: sequence
location: 497531..498475
location: region:497531-498475:1
so has part: feature:497531-498475:1:exon
subclass of: SO_0000010

position:497531:1
position: 497531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498475:1
position: 498475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497531-498475:1:exon

DK880_RS01885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01885
old locus tag: DK880_00387
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934622.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MEKITPKIDLAFKKIFGVEENKDLLIALINATVSPEDQVVDLTLLNPYNPKNFRSDKLSILDVKAIGETGKRFNIEIQITDEADYDKRALYYWAKLYTDQLKSSETYSSLNKAIGIHILNFISITDSNKYHNVFHIREQESGLPYFTDLELHTIELIKFSNDPKEDLETLLKKIKNSLDIWIAFLTRHDLLNKDNLPQPLNSNSLKKALHVLDTINFTAEERMAYEDRLKWLRIEANTLEKARNEGKAEGKAEGIQEGIQEGIQIGQKKGKLEGEREKAFSIAKGMLQHGYPIEAISSLTGLSAEQIKQITQYS
SIO_010081: DK880_RS01885
subclass of: SO_0000673
so part of: DK880_RS01885
location: 497531..498475
location: region:497531-498475:1
so has part: feature:497531-498475:1:exon

WP_109997140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:497531-498475:1:exon

DK880_RS01890
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01890
so part of: sequence
location: complement(498596..498961)
location: region:498596-498961:-1
so has part: feature:498596-498961:-1:exon
subclass of: SO_0000010

position:498596:-1
position: 498596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498961:-1
position: 498961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498596-498961:-1:exon

DK880_RS01890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01890
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIENTSPIWLARLTSIVVGLCAMLLAFCCKDLLALLMLAIALYVPIVTAPFVLALFGFRCNSCTALIGVITGILAILAWNRWSKPITGMDGSFFCMLASDLVMLVTHYLLPQPAGTAVGIS
SIO_010081: DK880_RS01890
subclass of: SO_0000673
so part of: DK880_RS01890
location: complement(498596..498961)
location: region:498596-498961:-1
so has part: feature:498596-498961:-1:exon

WP_109997141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:498596-498961:-1:exon

DK880_RS01895
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01895
old locus tag: DK880_00389
so part of: sequence
location: 499091..500035
location: region:499091-500035:1
so has part: feature:499091-500035:1:exon
subclass of: SO_0000010

position:499091:1
position: 499091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500035:1
position: 500035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499091-500035:1:exon

DK880_RS01895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01895
old locus tag: DK880_00389
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934622.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MEKITPKIDLAFKKIFGVEENKDLLIALINATVSPEDQVVDLILLNPYNPKNFRSDKLSILDVKAIGETGKRFNIEIQITDEADYDKRALYYWAKLYTDQLKSSETYSSLNKAIGIHILNFISITDSNKYHNVFHIREQESGLPYFTDLELHTIELIKFSNDPKENLETLLKKIKNSLDIWIAFLTRHDLLNKDNLPQPLNSNSLKKALYVLDTINFTAEERMAYEDRLKWLRIEANTLEKARNEGKAEGKAEGKAEGKAEGKAEGKAEGKAEGEMAKAFSIAKAMLQHGYPIEAISSLTGLSTEQIKQITQYS
SIO_010081: DK880_RS01895
subclass of: SO_0000673
so part of: DK880_RS01895
location: 499091..500035
location: region:499091-500035:1
so has part: feature:499091-500035:1:exon

WP_109997698.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:499091-500035:1:exon

DK880_RS01900
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01900
old locus tag: DK880_00390
so part of: sequence
location: 500289..501293
location: region:500289-501293:1
so has part: feature:500289-501293:1:exon
subclass of: SO_0000010

position:500289:1
position: 500289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501293:1
position: 501293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500289-501293:1:exon

DK880_RS01900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01900
old locus tag: DK880_00390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014935040.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MEKITPKIDLAFKKIFGVEENKDLLIALINATVSPEDQVVDLTLLNPYNPKNFRSDKLSILDVKAIGETGKRFNIEIQITDEADYDKRALYYWAKLYTDQLKSSETYSSLNKAIGIHILNFISITDSNKYHNVFHIREQESGLPYFTDLELHTIELIKFSNDPKEDLETLLKKIKNSLDIWIAFLTRHDLLNKDNLPQPLNSNSLKKALHVLDTINFTAEERMAYEDRLKWLRIEANTLEKARNEGKAEGKAEGKAEGKAEGKAEGKAEGKAEGIQEGIQEGIQIGQKKGKLEGEMAKAFSIAKAMLQHGYPIEAISSLTGLSTEQIKQITQYS
SIO_010081: DK880_RS01900
subclass of: SO_0000673
so part of: DK880_RS01900
location: 500289..501293
location: region:500289-501293:1
so has part: feature:500289-501293:1:exon

WP_109997142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:500289-501293:1:exon

DK880_RS01905
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01905
old locus tag: DK880_00391
so part of: sequence
location: 501547..502515
location: region:501547-502515:1
so has part: feature:501547-502515:1:exon
subclass of: SO_0000010

position:501547:1
position: 501547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502515:1
position: 502515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501547-502515:1:exon

DK880_RS01905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01905
old locus tag: DK880_00391
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934622.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MEKITPKIDLAFKKIFGVEENKDLLIALINATVSPEDQVVDLTLLNPYNPKNFRSDKLSILDVKAIGETGKRFNIEIQITDEADYDKRALYYWAKLYTDQLKSSETYSSLNKAIGIHILNFISITDSNKYHNVFHIREQESGLPYFTDLELHTIELIKFSNDPKEDLETLLKKIKNSLDIWIAFLTRHDLLNKDNLPQPLNSNSLKKALHVLDTINFTAEERMAYEDRLKWLRIEANTLEKARNEGKAEGKAEGKAEGKAEGIQEGIQEGIQIGQKKGKLEGEREKAFSIAKAMLQHGYPIEVISSLTGLSTEQIKQITQYS
SIO_010081: DK880_RS01905
subclass of: SO_0000673
so part of: DK880_RS01905
location: 501547..502515
location: region:501547-502515:1
so has part: feature:501547-502515:1:exon

WP_109997143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:501547-502515:1:exon

DK880_RS01910
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01910
old locus tag: DK880_00392
so part of: sequence
location: complement(502626..504143)
location: region:502626-504143:-1
so has part: feature:502626-504143:-1:exon
subclass of: SO_0000010

position:502626:-1
position: 502626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504143:-1
position: 504143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502626-504143:-1:exon

DK880_RS01910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01910
old locus tag: DK880_00392
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:solute symporter family protein
translation: MNNLFLMLLFDQLPLCMVMIFLIVTLLVGLYYSDKTTTLRAYAVGDKQFSTLTLVATTLATSWGGGQLVRDVEQVYDRGLYWMIFSCLSFADVWILIPLSLRMGGFIQHFSMPESMGSVYGKYPRFITALAGIASSIAIIASQINVMSLAISKCIETEQPIYIGCTTVAAALILIFYSTFGGIRAVTFTDVLQFVTFSAVIPLFTWFMFRQTGKSINDIAIFIHNQPKFQFSYVFHFDRNLFIMLSMVLGIMAAIDPTTMQRIYMASSPRQANKVFLYSGLFSFLMIGCIIVASLFVFVSMPTLSTAEVWPYIMNHIPSVFKGCICISLLAMTMSTADSKLNTCSVMVSHDIVESIKQCNIPLFQSSSLRFMVQPLQWLARLIENTSPIWLARLTSIVVGLCAMLLAFCCKDLLALLMLAIALYVPIVTAPFVLALFGFRGSSQTALIGMITGIVAILAWNRWIKPITGMDGSFFCMLANGLAMLAAHYLLPQPAGTGWVSPDQT
SIO_010081: DK880_RS01910
subclass of: SO_0000673
so part of: DK880_RS01910
location: complement(502626..504143)
location: region:502626-504143:-1
so has part: feature:502626-504143:-1:exon

WP_204082289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:502626-504143:-1:exon

DK880_RS01915
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01915
old locus tag: DK880_00393
so part of: sequence
location: 504621..505403
location: region:504621-505403:1
so has part: feature:504621-505403:1:exon
subclass of: SO_0000010

position:504621:1
position: 504621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505403:1
position: 505403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504621-505403:1:exon

DK880_RS01915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01915
old locus tag: DK880_00393
inference: COORDINATES: protein motif:HMM:NF013813.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diaminopimelate epimerase
translation: MQLPFAKYQAIGNDFILINNFDNLFRYTPTLVQQLCHRQFGIGADGIVTIEKKEGYDFSILHYNADGSRGGGFCGNGTRCALHYAIHLGLVQQEAFFVAFDGIHTGYLRNDLIHLKLKDIDHAIQPLYTGYFINNGTNHYVEIVSNVAQVNMMTMGLAKRKMVPFEKEGVNLSFVQLMHDSIFVRTCECGLEYEPLSCGTGAVASALIASSYYGLKSPVKVVTKGGDCSVTFTSLPDGKFKDIYLNGPVYQVFQGIIRLD
SIO_010081: DK880_RS01915
subclass of: SO_0000673
so part of: DK880_RS01915
location: 504621..505403
location: region:504621-505403:1
so has part: feature:504621-505403:1:exon

WP_109997145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:504621-505403:1:exon

DK880_RS01920
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01920
old locus tag: DK880_00394
so part of: sequence
location: 505412..505720
location: region:505412-505720:1
so has part: feature:505412-505720:1:exon
subclass of: SO_0000010

position:505412:1
position: 505412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505720:1
position: 505720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505412-505720:1:exon

DK880_RS01920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01920
old locus tag: DK880_00394
inference: COORDINATES: protein motif:HMM:NF014633.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF167 domain-containing protein
translation: MNKAHHLSVYAKPNSRYNKIEQWISVKNKYWLQVRVTAKAQSGAANHAIICLLAQTLGIAKSHICLLHGATARYKIFKITGWSDSVAEKLPPPAPQLILTLS
SIO_010081: DK880_RS01920
subclass of: SO_0000673
so part of: DK880_RS01920
location: 505412..505720
location: region:505412-505720:1
so has part: feature:505412-505720:1:exon

WP_109997146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:505412-505720:1:exon

DK880_RS01925
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01925
old locus tag: DK880_00395
so part of: sequence
location: 506007..507143
location: region:506007-507143:1
so has part: feature:506007-507143:1:exon
subclass of: SO_0000010

position:506007:1
position: 506007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507143:1
position: 507143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506007-507143:1:exon

DK880_RS01925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01925
old locus tag: DK880_00395
inference: COORDINATES: protein motif:HMM:NF016915.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta hydrolase
translation: MDPSQAQPIGERTIAATLANPTLLRKSTQATFGMVLLHGLSMDRKEMQMLANELSEKYKDNLLIINSSVREQGISEDYSIDQQVEMVYQEIQTTLRTYHKDSQSFPLFILGQSQGGIIATLIAKRYKHTLHLLGFITHNAPLQGAAILTRGPLAIQHFKNKAKNGLNIIGTKVNWSLFALAALAKTADCIYPLLQGMGYKKFAGIKDTLPNRPCTSAVYHYLRNSQPSDRVPGLLIAGYQNDYGRLFRHTITAYKEAHQALNINEKVDQAIQALNEATALLVTGETDGLHDHLIPLQSQLCRGDSLEDLTHIGNTPYAIGMPGNPAIQCFVIRDITHCNDIFPISRREIEAEEYMMHPHRMLPLLFQFIEEKLAACQP
SIO_010081: DK880_RS01925
subclass of: SO_0000673
so part of: DK880_RS01925
location: 506007..507143
location: region:506007-507143:1
so has part: feature:506007-507143:1:exon

WP_162534110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:506007-507143:1:exon

DK880_RS01930
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01930
old locus tag: DK880_00396
so part of: sequence
location: 507198..509999
location: region:507198-509999:1
so has part: feature:507198-509999:1:exon
subclass of: SO_0000010

position:507198:1
position: 507198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509999:1
position: 509999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507198-509999:1:exon

DK880_RS01930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01930
old locus tag: DK880_00396
inference: COORDINATES: protein motif:HMM:NF024117.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PD-(D/E)XK nuclease family protein
translation: MQTITYTPFLRQVVAYLNSQTAVMVEQCFIVFPTALSIDYFQSLWYDRNPSSLPTCLTLDQLIQNHSGLSEAPTITLLHELYLSASQLFPKPCSFEQFYPFGKILLQDFNDLDQYRIPATDCLLQLNQQKQSALLLNLGAPQHAFESKSKWETLFQQQEPLLPWEQLPLLYQIFTEKLFQKGKGYKGLCYKIASDKPVREPFASELIFAGFNLLTPAEEAFIAQIQAKIPLRFYWDSDPHYMDNPLNVAGNYLRQHQQKPYFQNHFPKVSSSYFHDKNKAILVTEVDATLIQIQSIVERLQAVTAEGKAVFPLPQTAIVLSGNQLLVPLLDRLAALAIPLHGRLAYPLNATLIYTAVVSLTEYWMESSNTAAPISHNLKRGLRLLQPFVEDHMQTKMKSLVKALPEYITHAALCREYVGPLKQWLSAANKGLLDFLKTILRLIATHFVPKQDLFLDINKTALQHILDEIAAFYSLAEANNLAAVFLNFLKESSLSFHQYNPLTGLYIIEVTESHNLDFEQLFFIDMAEGSFPTASQSHSLLPYNLRQHVGLPLRERVMESITAYGFYRLLQRSQHNYCSYTKQDHGKQPAEISRLLLQLSFDSKLNITQRLRSSCYAPLPIAPISMEKDAAIMQLLAQFVVKGHTSSASLTASALIAYLSCPLQFYFRYLLQIKPMPQEKEAAVTVGQLLHKVMAQLYRPFVDKQLTKETLHHIASKIKQETALACSSLTGQTAAELTVYTALLEKMLERLLTLDETMTPFTLLGVEIKKKQNIFLHKEQKIALSGVVDRIDHTTHGIRIVDYKTGIANDRIPSIAALFNRATVKNNSAIFQLFLYAWLVLTEGSETEQQIVIPYLISIRSLFLDGYVPAVSIQSNETKAYERIEDVRPFIQVFEKDLRSLLVELFNPTVPFTQTEDRELCSYCSYAAICRRN
SIO_010081: DK880_RS01930
subclass of: SO_0000673
so part of: DK880_RS01930
location: 507198..509999
location: region:507198-509999:1
so has part: feature:507198-509999:1:exon

WP_162534111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:507198-509999:1:exon

DK880_RS05155
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05155
so part of: sequence
location: complement(510107..510352)
location: region:510107-510352:-1
so has part: feature:510107-510352:-1:exon
subclass of: SO_0000010

position:510107:-1
position: 510107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510352:-1
position: 510352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510107-510352:-1:exon

DK880_RS05155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05155
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKLPPFIPLPPSPCFSPPFIAPSLSPLLYRPSFIAPPLSSPLYRPPFIAPPLSPPLYRPPFIVPPLFPLYCPPGQSVNIT
SIO_010081: DK880_RS05155
subclass of: SO_0000673
so part of: DK880_RS05155
location: complement(510107..510352)
location: region:510107-510352:-1
so has part: feature:510107-510352:-1:exon

WP_162534112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510107-510352:-1:exon

DK880_RS01935
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: hslU
locus tag: DK880_RS01935
old locus tag: DK880_00397
so part of: sequence
location: 510377..511756
location: region:510377-511756:1
so has part: feature:510377-511756:1:exon
subclass of: SO_0000010

position:510377:1
position: 510377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511756:1
position: 511756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510377-511756:1:exon

DK880_RS01935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: hslU
locus tag: DK880_RS01935
old locus tag: DK880_00397
EC number: 3.4.25.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934866.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent protease ATPase subunit HslU
translation: MVIPTGKQTLTPKEIVQELDKYIIGQSEAKCNVAVALRNRWRRMQVTQQLKEDIMPHNILMIGPTGVGKTEIARRLAKIAHVPFIKVEASKFTEVGYVGRDVESMVRDLVERAIAMVKAEKTEALQVTIQQQIEELLLDIVCPSTKAKEGTDTKSDRPQNIDVVRAHFREQLSSGLLEQQQIEIQVSNNPTYQGNLTGIGMGPSTDEGIIMNFQDMLSSFLSKQTKKRKVTIAEARNLLLAEELAKQIDMHIVKEEAIERASNTGIIFIDEIDKIAHTTQTHGSGVSREGVQRDLLPIVEGSAIHTKYGIVHTDHILFIGAGAFHMAKPSDLIPELQGRFPIRVTLENLSQTHFYQILDEPKSALPMQYQALLAVEGITLHFDLEAKKEIAAMAYRLNEAIENIGARRLQTVMSHLLNPILFDVPDCIVPPMELTITKEMVQKSLASLLQHKDLNQYIL
SIO_010081: DK880_RS01935
subclass of: SO_0000673
so part of: DK880_RS01935
location: 510377..511756
location: region:510377-511756:1
so has part: feature:510377-511756:1:exon

WP_109997149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510377-511756:1:exon

DK880_RS01940
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01940
old locus tag: DK880_00398
so part of: sequence
location: complement(511769..513535)
location: region:511769-513535:-1
so has part: feature:511769-513535:-1:exon
subclass of: SO_0000010

position:511769:-1
position: 511769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513535:-1
position: 513535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511769-513535:-1:exon

DK880_RS01940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01940
old locus tag: DK880_00398
inference: COORDINATES: protein motif:HMM:NF012235.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MQPITKNLQKFLLYFVGQYRWRFTAMAVSYTAYYVLDNLMLPFAFNKLFIDRLYTLDNNRTAAWLQLGWPLFVLLAVIFFIDILSRFSDYLKVRTIPTFEARVRMWIVSYVQNHSYQLFTENFSGDLVRRIDNLTDGVSQLVMRIIDSFLPTFCTMLLGVLSFTLVQPVFGIMLMVWLLLYTLIYYLFAKKFTRYAMVHAEKVSLLSGSIMDGFTNVLSMKLFAFNQKDAAHLSVPQEAEQKAHEHVLRMIMYLHCIIGVLSIAFMGIGLIGQMVYYWQLGKLDIPTIVYIATTGTNLCNLVWDLLADFPAFFEEIGYCSQALQLLQQKHAIVDLPAATTLQCPSAPAIAFNQISFSYSSTAPLFEQQDLYIAAGEKVGLVGLSGSGKSTFAYLLLRFYDLQGGNITINGQDIATVTQSSLRAAISLVPQDTILFHTTVLENIRYGHQGATEAEVIAAAQSVGCHDFIMQLPANYQTLVGERGAKLSGGQRQRIAIVRAVLKNAPILILDESTSALDALTENAIQESLRIAMTGRTTLVIAHRISALSAMDRIVVLEHGKIIAEGSHDLLLRTNAYYAAMCQLQPTII
SIO_010081: DK880_RS01940
subclass of: SO_0000673
so part of: DK880_RS01940
location: complement(511769..513535)
location: region:511769-513535:-1
so has part: feature:511769-513535:-1:exon

WP_109997150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:511769-513535:-1:exon

DK880_RS01945
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01945
old locus tag: DK880_00399
so part of: sequence
location: complement(513718..514068)
location: region:513718-514068:-1
so has part: feature:513718-514068:-1:exon
subclass of: SO_0000010

position:513718:-1
position: 513718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:514068:-1
position: 514068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513718-514068:-1:exon

DK880_RS01945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01945
old locus tag: DK880_00399
inference: COORDINATES: protein motif:HMM:NF012314.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin domain-containing protein
translation: MENAVVEFSGYKLREAINQHELVFVDFWAPWCGPCLRLGPIIEELAFFYAGRILIGKLNIEDDAEMVTKYAIRTIPTMLIIRKGIEVERMVGSLPLETIQKILNNYLIKQVDIIEG
SIO_010081: DK880_RS01945
subclass of: SO_0000673
so part of: DK880_RS01945
location: complement(513718..514068)
location: region:513718-514068:-1
so has part: feature:513718-514068:-1:exon

WP_109997151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513718-514068:-1:exon

DK880_RS01950
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: alaS
locus tag: DK880_RS01950
old locus tag: DK880_00400
so part of: sequence
location: complement(514427..517045)
location: region:514427-517045:-1
so has part: feature:514427-517045:-1:exon
subclass of: SO_0000010

position:514427:-1
position: 514427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517045:-1
position: 517045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514427-517045:-1:exon

DK880_RS01950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: alaS
locus tag: DK880_RS01950
old locus tag: DK880_00400
EC number: 6.1.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009186361.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alanine--tRNA ligase
translation: MQSSAIRAQFIQFFQQKGHQHQIAAPIVNKEDPSLLFVNAGMNPFKDIILGYQPIQTARVVSAQPCLRVSGKHNDLEVVGVDGYHHTLFEMLGNWSFGDYFKEAAIQWAWELLTEVYQLPKERLYVTTFAGDPEDNLPEDKETAAIWRNYLPPTHILPFAKKDNFWEMGTQGPCGPCSEIHIDIRPEATRQSIAAAQLVNQENPQVLEVWNLVFMQYNRKNSGKLVELPHKHIDTGMGLERLAMVLQGKMATYDTDIFTPLIQAIEKISGKAYADSTATAAAMRVIADHLRAVAFAIADGALPAATKVGYVVRRILRRAIRYGYSYLAIEEPFIYQLVAPLVAQMGDAYPNLRVQQTTIEEIIQTEEKAFLKTLAAGLQRLHYLNPQGTLAGKVAFELYDSYGFPLDLTKLIAKEKNLILDEAGFEVALQAQQARSQQDAAVTYGDWHQLQPGVTTRFVGYDQLTATTSIVQWRSLTDKRGKRYQLVLAVTPFYPAGGGQVADKGSIHCGTESIAVLDVQKEHGLLIHTVDRLPDPIEGTLAACVDEPSRKETAANHTATHLLQAALRALLGKQLSQKGSLVTASALRFDFTHVAKLTAAQIEAIEAMVNAKIRANIPCLEQRDLPLETAKARGAQALFGEKYAAEVRVITFDEKFSMELCGGTHVKTTGEIGFFKIIRETAIGSGIRRIEALTARNAAEFVNQELTKLVTLSTLLRQPKDIVKVVERLLHEKKQLEKQCQAYETHIIQQVTQQLSVEVEQVGDAYLLIQTVILPHLDALRQVAFQFKARYKKIFIVLATELSHKAQLLILRSEALAATCNAHLLMQSIAPLIEGKGGGQPFVATAGGSNPAAIPVALQMARQLFLDASLAT
SIO_010081: DK880_RS01950
subclass of: SO_0000673
so part of: DK880_RS01950
location: complement(514427..517045)
location: region:514427-517045:-1
so has part: feature:514427-517045:-1:exon

WP_109997152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:514427-517045:-1:exon

DK880_RS01955
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01955
old locus tag: DK880_00401
so part of: sequence
location: complement(517194..519209)
location: region:517194-519209:-1
so has part: feature:517194-519209:-1:exon
subclass of: SO_0000010

position:517194:-1
position: 517194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519209:-1
position: 519209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517194-519209:-1:exon

DK880_RS01955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01955
old locus tag: DK880_00401
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVYKKIVNNIPSLSSLLLAGMVLGGSCNGKKNGAVSGTGGDAEVGNEVSDKKFSPELSKARWDAWAFIFGSKQLSYACFLNKEKQLDPMLPETYTISRSTTLETMTKLLEERVRSLKERFSLNGGITQNVETALASLIGWLDVKNKTNVSAHTQQKKYFPHYGKAIEQIVCIYNTFYSLIQELRSTQDSIHKGQYDINFKWKTKEEDLDTFYNNYIKDKFGLASRIAVAKNGEKKDILLDEHTEQLLPFLISSSSEGEGGASELMEEQVGNVMIHANNGDTLLDEINVQRDIKAGNDKTKKPYHFHIPKITGGVDLRSGSRVLTFKELLFLLCKGTLESKKDAKVENGIFGVISDTSGKKDGKLKSNPDAYKKFASDAQNPDLFVTHITDLIRNNSLKGWWSVDISEASSQLEELISKYASQAPLCNATNFTTELLKKMVEWAGATGATGITIPDRVDADGVDTVLDEIITKTSDAQTSGNSLQLISCRLANQIVSDTILLGQLKQQGGFTVGTLKDELLQMLESKKMQENLLCITVGGKPKLTSLGVKFQGMVCRFDKILKENKGTERSCTYEEIKKSTGFDIEPINKWVEETYHLLKAFLVLPDKLANVFYKYQDDNQTVDYATEIGIQNADLGLDQNPVIDKLDSFRHEYLKAKKKTEQPETPATPAA
SIO_010081: DK880_RS01955
subclass of: SO_0000673
so part of: DK880_RS01955
location: complement(517194..519209)
location: region:517194-519209:-1
so has part: feature:517194-519209:-1:exon

WP_162534113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:517194-519209:-1:exon

DK880_RS01960
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: uvrA
locus tag: DK880_RS01960
old locus tag: DK880_00402
so part of: sequence
location: complement(519697..522501)
location: region:519697-522501:-1
so has part: feature:519697-522501:-1:exon
subclass of: SO_0000010

position:519697:-1
position: 519697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522501:-1
position: 522501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519697-522501:-1:exon

DK880_RS01960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: uvrA
locus tag: DK880_RS01960
old locus tag: DK880_00402
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012472428.1
GO component: GO:0009380 - excinuclease repair complex [Evidence IEA]
GO function: GO:0009381 - excinuclease ABC activity [Evidence IEA]
GO process: GO:0006289 - nucleotide-excision repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: excinuclease ABC subunit UvrA
translation: MVALDHLNPREYLIIRGARTHNLKNISVAIPHNQLVVVAGLSGSGKSSLIVDTLFVEAQRRYIESLSTHARQFLGKMAKPAVDSIEGVRPAIAIQQGVVHKNPRSTVATVTELADYFYLLYARIGITYSPLSGQVVQKDSVTDVVDYLYQQEEGTKLLLLYPIACSNQEALLAQLSAAQGKGFTRVMQADQLFFIEEILLGTISLRLDQPLYGLVDRLVVRKQDPHSQRRAADSVQVAFTEGDGRIAVSVIGGGQRLFSDRFERDGMLFELPSVPFFNSNTPYGACKQCAGLGYVIDLAEEKVIPNSALSLAEGAVAPWQGPIMRKWLAPLSVQQKTFDLLLHTPYSALTADQKEIIWKGKGDFIGIEPFFEFCAKQTDKIHYRVLLSRYRSKKVCPLCQGSCMRVDTKYVRIGPYALGELLTLPLQQVLAFCTALPLTVWQASVAQRIVTEIKNRLHYLVSVGLGYVTLNRPIDTLSNGEYQRVRLATALGSPLCGVLYILDEPTAGLHPRDIHRLTQQLVHLKEQGNTVIVIEHEAQVMQVADRIIEIGPEAGIGGGNLVFEGNLSELLQSEATHTARYLKGSEQIPLPKQRRDWCHSLWIKQARLHNLKDVTVAFPLQLLTVVTGVSGSGKSSLVSGVLYPALVAHLAGASRSAGSKDTLVGDFHCIQAVEHMQHHALGKWARSNPLTYLGLYDYIRTCFAQTALARKRNYQRGHFSFYSAKGQCSSCRGEGIQKIEMQFMAAIELPCEVCQGNRFKPEILDVTYCGKNITQLLHMTVAEALVFFADHACLMQSFKALQAIGLAYIALGQSFRSLSAGERQRLKLAYYLAKETKDQSILFILDEPTTGLHLRDVHLLVMALHALVQRGHTVIVMEHHLDIISNADWVIDLGPGGGAEGGQVVFTGRPEALLQEADNVTAYHARHGRIHCVD
SIO_010081: DK880_RS01960
subclass of: SO_0000673
so part of: DK880_RS01960
location: complement(519697..522501)
location: region:519697-522501:-1
so has part: feature:519697-522501:-1:exon

WP_239302538.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:519697-522501:-1:exon

DK880_RS01965
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: ruvX
locus tag: DK880_RS01965
old locus tag: DK880_00403
so part of: sequence
location: complement(522848..523300)
location: region:522848-523300:-1
so has part: feature:522848-523300:-1:exon
subclass of: SO_0000010

position:522848:-1
position: 522848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523300:-1
position: 523300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522848-523300:-1:exon

DK880_RS01965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: ruvX
locus tag: DK880_RS01965
old locus tag: DK880_00403
EC number: 3.1.21.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934872.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0008150 - biological_process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Holliday junction resolvase RuvX
translation: MAAEGRIIAIDYGLKRVGLAATDPLQLIAAPLLALPAAALIPFLEDYLQKEAVATFVIGMPRRSDGKPSVMGSAVAGVAVQLQQRFPQQQYYYQEERFTSKLAAKALYQAGYRKKDRQNKGNIDTMSAAIILQSFLYGIGQQQLDTFVKA
SIO_010081: DK880_RS01965
subclass of: SO_0000673
so part of: DK880_RS01965
location: complement(522848..523300)
location: region:522848-523300:-1
so has part: feature:522848-523300:-1:exon

WP_109997155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:522848-523300:-1:exon

DK880_RS05160
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05160
old locus tag: DK880_00404
so part of: sequence
location: complement(523368..524243)
location: region:523368-524243:-1
so has part: feature:523368-524243:-1:exon
subclass of: SO_0000010

position:523368:-1
position: 523368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524243:-1
position: 524243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523368-524243:-1:exon

DK880_RS05160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05160
old locus tag: DK880_00404
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVYVWFLFTVVFAGGCGEEFGKAEESRAIAVKSDIAKRVAAAVEADPLIVKIKAALAKRAAEVAASKTAAVEADPATAKIKAELAKRAAEVTAREAEKIAMVITRQSVIRATIAVVKRIRKANPNEVTSKVVTKIEAAAKRNIEGNHVCEQASVICGTWSGGIVFEAFEQTIKAIIEADPKIAKRKEAIAKEVKEKAEDAEKSVRKVIKEEMVGAALRKIVEAAGGGIKEKVLREVVKELETDVDGQKMAADAIVEAAMGNPVPVKARSAAAAEGVWKDIDSWLDSKRGTL
SIO_010081: DK880_RS05160
subclass of: SO_0000673
so part of: DK880_RS05160
location: complement(523368..524243)
location: region:523368-524243:-1
so has part: feature:523368-524243:-1:exon

WP_162534114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:523368-524243:-1:exon

DK880_RS01985
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: polA
locus tag: DK880_RS01985
old locus tag: DK880_00405
so part of: sequence
location: 524504..527188
location: region:524504-527188:1
so has part: feature:524504-527188:1:exon
subclass of: SO_0000010

position:524504:1
position: 524504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527188:1
position: 527188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524504-527188:1:exon

DK880_RS01985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: polA
locus tag: DK880_RS01985
old locus tag: DK880_00405
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012472521.1
GO function: GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO process: GO:0006261 - DNA-templated DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase I
translation: MNLFSTPKLFLLDGLSLIYRAYFALAKAAMVTAAGIPTGAIVGFVNTLLEMIQKEKPTHIIVTFDSKEKTFRHRWFPAYKAHRQAQPEAISIAIPYIQQLLTAWGILWMEYNGYEADDLMGSLAKQAAALDCSTYLMSMDKDLAQLVGKNVSLYKPTQHGQKAVILGEKEVLAQWGISKPTQVCDILALEGDPTDAIPGIPSIGRITAQKLIARFETLENLLENTNQLTDKLKTTLEQYADQGKLSKQLATICTDIPVTLDLNSCTYQLPSQTALEPLLTQLELKQFSKRLLGTAWQAGGNASLEAGNNAPPHHYQTIETLSDCQTLVQTLQQANVWAFDIATHASSDPYTAPLLGIAFSYKPGEAYYVPLPTDANDRKPFIQLLQPLLGQTQLLKISHDIKYKLIVLHQHGLALATPFFDTLIAHALLAADGKKQLADLLTRYLHYTPNQPSKASSPAVSAATSGTNAAYLLQLHEKLALALAAEADLFYQVEMPLIPILAAMELAGVAIDVPFLHSLSTQLQDKLKKLQAEIYALAGCSFNIDSPKQLGNVLFEQLALPTNPLKTKKGHYATGEKILEKLTAPIASAIRSYRSLQKLRSTYVEVLPTLLHPLDQRLHTSYQQATVVTGRLSATNPNLQNIPIKTKQGRELRRAFIPHNKGDLLFSADYSQIELRIMAACSQDATMLQAFQQDQDIHQITASKLFKVATTAVDNSMRRKAKTANFGILYGISAFGLAQRMDAISPKEAAQWMETYFAEFPGIKSYIDQTIASAEEKGYVTTLLGRKRFFPDIHSRNAILRNTAKRSVINTVIQGSAAEMIKLAMINIYHWLQSHALRTQMIMQVHDELVFNVPLEEVPSLQQQIPSLMAEALPLAHVPIKVNCHLGPNWLETS
SIO_010081: DK880_RS01985
subclass of: SO_0000673
so part of: DK880_RS01985
location: 524504..527188
location: region:524504-527188:1
so has part: feature:524504-527188:1:exon

WP_109997159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:524504-527188:1:exon

DK880_RS01990
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01990
old locus tag: DK880_00406
so part of: sequence
location: 527403..528245
location: region:527403-528245:1
so has part: feature:527403-528245:1:exon
subclass of: SO_0000010

position:527403:1
position: 527403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528245:1
position: 528245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527403-528245:1:exon

DK880_RS01990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01990
old locus tag: DK880_00406
EC number: 2.7.7.41
inference: COORDINATES: protein motif:HMM:NF013327.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphatidate cytidylyltransferase
translation: MLSTHSNFIQRFISAIFLTPLILFALVWSPWSYFFLFFYVVLLTMLEFYKLIKQAYVTPMRLYGILFGLLCYTATFAYYVQDHLSPLLGYAALLLLVCLPIIALYRRRFSNPFLDMAVTLLAVLYIAFPCSMLHQLAFFKGTYSYELIVGLLLIVWSQDIGAYFVGSTIGKRKLFERISPNKTWEGSIGGGICALIAGYSIPYVLHLSIIAPWQWMAIAVLTIFTGTYGDLVASLLKRSVAVKHSGSTIPGHGGFLDRIDSLLLTVPTVVAFLHISALWA
SIO_010081: DK880_RS01990
subclass of: SO_0000673
so part of: DK880_RS01990
location: 527403..528245
location: region:527403-528245:1
so has part: feature:527403-528245:1:exon

WP_109997160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:527403-528245:1:exon

DK880_RS01995
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS01995
old locus tag: DK880_00407
so part of: sequence
location: 528279..528935
location: region:528279-528935:1
so has part: feature:528279-528935:1:exon
subclass of: SO_0000010

position:528279:1
position: 528279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528935:1
position: 528935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528279-528935:1:exon

DK880_RS01995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS01995
old locus tag: DK880_00407
EC number: 4.1.1.65
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934506.1
GO function: GO:0004609 - phosphatidylserine decarboxylase activity [Evidence IEA]
GO process: GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphatidylserine decarboxylase family protein
translation: MKIHKEGKSILLWTPVVLCLIYYIIHKKVALSYYQSIGCAMLSATLYLWLIYFFRDPYRIIHQQDQYILGPADGKVLRIERVYEGEYLKEERIRISIFMSPFNVHVNRFPMSGKIVYFKYHPGKYLVAFHPKASTHNERTTIVVENENGQQILFKQIAGFIARRIKFYFKEGEMVQQGEKCGFIKFGSRAEVYLPIDATIQVNTGDKIKGGITVLAKI
SIO_010081: DK880_RS01995
subclass of: SO_0000673
so part of: DK880_RS01995
location: 528279..528935
location: region:528279-528935:1
so has part: feature:528279-528935:1:exon

WP_109997161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:528279-528935:1:exon

DK880_RS02000
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02000
old locus tag: DK880_00408
so part of: sequence
location: complement(529308..531476)
location: region:529308-531476:-1
so has part: feature:529308-531476:-1:exon
subclass of: SO_0000010

position:529308:-1
position: 529308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531476:-1
position: 531476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529308-531476:-1:exon

DK880_RS02000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02000
old locus tag: DK880_00408
inference: COORDINATES: protein motif:HMM:NF012706.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MAHKVAVGHAAKAPIKVLDIALVSDIRSLDPATAVQREASQALAQIYEGLLAYDAEHPYSKLVANIAAEMPLISSDKLEYTFRIQPGIRFQDDPCFLNKKGRELTAEDIAYTLKRIAHVQTNASGFSYIKGKIKGLDQWRETYQRGVASDYEQDIEGLKLIDRYTIQIKLREPSPLFLSYWAMPSFYIVAKEAVNHYGRNISQHPVGTGPFILKSWFSGKKLILEKNPNFRLRYLSSTSRKLPLVDRVVIHILPKALAWDSFKKRAVDLLPITDLPHVCKQVTEAGQLKPVVEGAGVHLCKLPSVMGNYYVFNCEAFPFKGNPKLRQAIAMAFNREEFRKAFYHGLADLPESIIPVGLDEHGKDDKDSHTSAYTNPYGSYNLKKAKVYLEESGYPNGVGLPTISLDIPLEDSRVIRGQAEFFAHCMKDLGIRVQIIEQSDSVLKRKINAKATMVHAIKVPVAYSDPIAFLSLLGDPASATFLFSDPIYPILYAHVVRMENTAERVALCRRLNEMVAELAPAIWLPRPHHLVLYHNWVKGVIPHFNWGEAQYISVDRVEKLAAKKKKEPIPTEENALMKKAVHKLKSAGKTARSGMDQTKEKLKKHMKSMKESAKQTTKQAVKKVVVKVIMYTMPSCPYCINAKKFLDQNVLNYKGIQYEEVNVTENPALFDTLKSTYNVKTVPQIFILYEDGSKTHVNGYSELIRLDEIEKAAQQVEKEMDN
SIO_010081: DK880_RS02000
subclass of: SO_0000673
so part of: DK880_RS02000
location: complement(529308..531476)
location: region:529308-531476:-1
so has part: feature:529308-531476:-1:exon

WP_162534115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:529308-531476:-1:exon

DK880_RS02005
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02005
old locus tag: DK880_00409
so part of: sequence
location: complement(531708..532025)
location: region:531708-532025:-1
so has part: feature:531708-532025:-1:exon
subclass of: SO_0000010

position:531708:-1
position: 531708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532025:-1
position: 532025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531708-532025:-1:exon

DK880_RS02005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02005
old locus tag: DK880_00409
inference: COORDINATES: protein motif:HMM:NF016839.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: septum formation initiator family protein
translation: MQGRDHILRIIGKIRKVLVDFYCVVTFFFIIWMYFLDDQNICAQYNVYKQCKKLEREHIYYTTHIQKIKEETKALLQEEERLEQLAREKYYMKKKQEDLYVIIRD
SIO_010081: DK880_RS02005
subclass of: SO_0000673
so part of: DK880_RS02005
location: complement(531708..532025)
location: region:531708-532025:-1
so has part: feature:531708-532025:-1:exon

WP_109997163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:531708-532025:-1:exon

DK880_RS02010
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rplQ
locus tag: DK880_RS02010
old locus tag: DK880_00410
so part of: sequence
location: complement(532523..533017)
location: region:532523-533017:-1
so has part: feature:532523-533017:-1:exon
subclass of: SO_0000010

position:532523:-1
position: 532523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533017:-1
position: 533017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532523-533017:-1:exon

DK880_RS02010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rplQ
locus tag: DK880_RS02010
old locus tag: DK880_00410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014772319.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L17
translation: MRHRNKLNQLGRPVGHRKALLRNLAKSLIMHKRMVTTVAKAKVLRQFIEPILSRAKQDTTHSRRMVFSSFQDKEPVKELFNHIVEKIAQRPGGYTRIIKLGPRAGDCAAMAMVELVDYNTLYVKAKKEEKRTKTTRRSKKKSNLPVAVDTDTQEINTEKVEEGV
SIO_010081: DK880_RS02010
subclass of: SO_0000673
so part of: DK880_RS02010
location: complement(532523..533017)
location: region:532523-533017:-1
so has part: feature:532523-533017:-1:exon

WP_109997164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:532523-533017:-1:exon

DK880_RS02015
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02015
old locus tag: DK880_00411
so part of: sequence
location: complement(533059..534042)
location: region:533059-534042:-1
so has part: feature:533059-534042:-1:exon
subclass of: SO_0000010

position:533059:-1
position: 533059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534042:-1
position: 534042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533059-534042:-1:exon

DK880_RS02015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02015
old locus tag: DK880_00411
EC number: 2.7.7.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010611192.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit alpha
translation: MSSLALQMPEKVFVDKVTPFQGVFRFLPLEKGYGTTIGNALRRILLSSLKGYAIVAIKIPGVRHEFSTLDGVREDLVEIILNLKQVRLKKIAEEGEDVILVRVHKTEFRAGDIAKATPFFDVLNKELLICTLDESESFDIELHIARNRGYLSAEENKPEGDVIDRIPIDAIFSPIVKVAYQVENVRVGQRTDYEQLTMEVETDGSITPEESIRQAAQLMIQHLQLLSGEKMAVQLVDHAEASLLNPEEIAIKKTLQTHINELDCSSRVLNCLKSAGIETLSDLVTVKDFDAMKFRNFGRKSRDEIDALLAERNLKIGMDISKYQLEK
SIO_010081: DK880_RS02015
subclass of: SO_0000673
so part of: DK880_RS02015
location: complement(533059..534042)
location: region:533059-534042:-1
so has part: feature:533059-534042:-1:exon

WP_109997165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:533059-534042:-1:exon

DK880_RS02020
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rpsD
locus tag: DK880_RS02020
old locus tag: DK880_00412
so part of: sequence
location: complement(534099..534707)
location: region:534099-534707:-1
so has part: feature:534099-534707:-1:exon
subclass of: SO_0000010

position:534099:-1
position: 534099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534707:-1
position: 534707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534099-534707:-1:exon

DK880_RS02020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rpsD
locus tag: DK880_RS02020
old locus tag: DK880_00412
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019596889.1
GO component: GO:0015935 - small ribosomal subunit [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S4
translation: MARYHGPRARIARRYNDPIFGLSINKVLQKKNYAPGQHGKGRKRRSPFALQLIEKQKAKYTYGLLERPFYNLFVKAAKSKGITGEVMLQRLEARLDNTVYRLGIASTRREARQLTTHRHITVNGKVVNIPSYTLKPGDLVGVAQKSKEMEVITTNVTNHPSTKYNWLEWDAPSMVGKFVTFPQRSDIPEKINERSIVELYSK
SIO_010081: DK880_RS02020
subclass of: SO_0000673
so part of: DK880_RS02020
location: complement(534099..534707)
location: region:534099-534707:-1
so has part: feature:534099-534707:-1:exon

WP_109997166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534099-534707:-1:exon

DK880_RS02025
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rpsK
locus tag: DK880_RS02025
old locus tag: DK880_00413
so part of: sequence
location: complement(534766..535158)
location: region:534766-535158:-1
so has part: feature:534766-535158:-1:exon
subclass of: SO_0000010

position:534766:-1
position: 534766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535158:-1
position: 535158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534766-535158:-1:exon

DK880_RS02025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rpsK
locus tag: DK880_RS02025
old locus tag: DK880_00413
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934280.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S11
translation: MKHTAKNKIKKRVVKVSREGQAHIQATFNNLIISITNELGQVIAWSSSGKMGFKGSKKNTPYAAQIASASCAKEAYACGLRRVDVFVKGPGIGRESAIRALQDNSLEVISIKDVTPLPHNGCRPPKRRRP
SIO_010081: DK880_RS02025
subclass of: SO_0000673
so part of: DK880_RS02025
location: complement(534766..535158)
location: region:534766-535158:-1
so has part: feature:534766-535158:-1:exon

WP_109997167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534766-535158:-1:exon

DK880_RS02030
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rpsM
locus tag: DK880_RS02030
old locus tag: DK880_00414
so part of: sequence
location: complement(535195..535572)
location: region:535195-535572:-1
so has part: feature:535195-535572:-1:exon
subclass of: SO_0000010

position:535195:-1
position: 535195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535572:-1
position: 535572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535195-535572:-1:exon

DK880_RS02030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rpsM
locus tag: DK880_RS02030
old locus tag: DK880_00414
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009578731.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S13
translation: MVRVLSVDIPGNKRGAIALTYIYGIGRSRADKILAAVQIDKNRCASTWTDDDLKAIREAIRGIYKIEGDLKSEIRLNIKRLIEINCYRGIRHRLGLPVRGQRTRTNARTRKGKPKTIANKKKATK
SIO_010081: DK880_RS02030
subclass of: SO_0000673
so part of: DK880_RS02030
location: complement(535195..535572)
location: region:535195-535572:-1
so has part: feature:535195-535572:-1:exon

WP_109997168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:535195-535572:-1:exon

DK880_RS02035
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rpmJ
locus tag: DK880_RS02035
so part of: sequence
location: complement(535576..535692)
location: region:535576-535692:-1
so has part: feature:535576-535692:-1:exon
subclass of: SO_0000010

position:535576:-1
position: 535576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535692:-1
position: 535692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535576-535692:-1:exon

DK880_RS02035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rpmJ
locus tag: DK880_RS02035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014790280.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L36
translation: MKVKASVRKRSSDCKVVRRRGVLFIINKKNPKFKQRQG
SIO_010081: DK880_RS02035
subclass of: SO_0000673
so part of: DK880_RS02035
location: complement(535576..535692)
location: region:535576-535692:-1
so has part: feature:535576-535692:-1:exon

WP_109997169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:535576-535692:-1:exon

DK880_RS02040
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: infA
locus tag: DK880_RS02040
old locus tag: DK880_00415
so part of: sequence
location: complement(535711..535938)
location: region:535711-535938:-1
so has part: feature:535711-535938:-1:exon
subclass of: SO_0000010

position:535711:-1
position: 535711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535938:-1
position: 535938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535711-535938:-1:exon

DK880_RS02040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: infA
locus tag: DK880_RS02040
old locus tag: DK880_00415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934283.1
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-1
translation: MAKIPPIEQDGIVQEALPNAVFRVVLKNGHVVRAHISGKMRKNYIRILPGDSVRMELTPYDLTQARIVHRYKATQ
SIO_010081: DK880_RS02040
subclass of: SO_0000673
so part of: DK880_RS02040
location: complement(535711..535938)
location: region:535711-535938:-1
so has part: feature:535711-535938:-1:exon

WP_109997170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:535711-535938:-1:exon

DK880_RS05165
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05165
so part of: sequence
location: 536049..536438
location: region:536049-536438:1
so has part: feature:536049-536438:1:exon
subclass of: SO_0000010

position:536049:1
position: 536049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536438:1
position: 536438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536049-536438:1:exon

DK880_RS05165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05165
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPSSLTPNPPYLPLFACFSLSPSLAYLPLLLAPSLACSLSCLSPSLACSLSCLLPLLLAPSLACSLSCLLPLLLAPSLACSLSCLLPLLLAPSLACSLSCLSPSLACSLLFAFRFIRQLLNILKIYLNA
SIO_010081: DK880_RS05165
subclass of: SO_0000673
so part of: DK880_RS05165
location: 536049..536438
location: region:536049-536438:1
so has part: feature:536049-536438:1:exon

WP_162534116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:536049-536438:1:exon

DK880_RS02050
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: secY
locus tag: DK880_RS02050
old locus tag: DK880_00416
so part of: sequence
location: complement(536466..537764)
location: region:536466-537764:-1
so has part: feature:536466-537764:-1:exon
subclass of: SO_0000010

position:536466:-1
position: 536466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537764:-1
position: 537764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536466-537764:-1:exon

DK880_RS02050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: secY
locus tag: DK880_RS02050
old locus tag: DK880_00416
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934284.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecY
translation: MNKLFQTIKDIYQIKELRVRVRNTFFFLLFFRAGTVVVLPGINMERLSSNVKGMLGLLDSFLGSSFSKASVFALGVAPYISASIVMHLLAIAWPKVQKIQREGEVGRRRIAQITRKLTIFIAIFQSFQYILFTSREGVVAINQTLFMVMAIIILTAGTLFCMWIGEQLTDRGIGNGVTMLIMVGIVSSFPAALYEEARFRGSKGMFVFMLELLLLFFILVVVVAFTQATRKVPIQYAKQLSSSTVYGGQRQYLPFKLNSVGVMPIIFANMLVFLVTLLLRIKWLGGKFAWLMDISNKLQDATSWLYNVLFGLLIILFTFFYTAFTVNPVQIAEDMKRNGSFIPGIASGNATACFLDNVLERITFYSAIFLAVIAVLPLFARMAGLSPNFSQFYGGSALLIMVGSMLEIIQQMESYLLMRRYELIINKGARIR
SIO_010081: DK880_RS02050
subclass of: SO_0000673
so part of: DK880_RS02050
location: complement(536466..537764)
location: region:536466-537764:-1
so has part: feature:536466-537764:-1:exon

WP_109997171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:536466-537764:-1:exon

DK880_RS02055
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rplO
locus tag: DK880_RS02055
old locus tag: DK880_00417
so part of: sequence
location: complement(537757..538215)
location: region:537757-538215:-1
so has part: feature:537757-538215:-1:exon
subclass of: SO_0000010

position:537757:-1
position: 537757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538215:-1
position: 538215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537757-538215:-1:exon

DK880_RS02055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rplO
locus tag: DK880_RS02055
old locus tag: DK880_00417
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934285.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L15
translation: MELHTLQPALGSFKCKKRIGRGQGSGKGGTATRGCKGAQSRTGYKRKFGFEGGQQPLQRRLPKYGFQCPNRKLFTPLNLSTLQALVEKYNVSCIDSIFLRKHRIIGRQEKYKILGDGSLTVKLSVTAHRCSVSALQAIRHIGGEVVILPIYE
SIO_010081: DK880_RS02055
subclass of: SO_0000673
so part of: DK880_RS02055
location: complement(537757..538215)
location: region:537757-538215:-1
so has part: feature:537757-538215:-1:exon

WP_109997172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:537757-538215:-1:exon

DK880_RS02060
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rpmD
locus tag: DK880_RS02060
old locus tag: DK880_00418
so part of: sequence
location: complement(538227..538409)
location: region:538227-538409:-1
so has part: feature:538227-538409:-1:exon
subclass of: SO_0000010

position:538227:-1
position: 538227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538409:-1
position: 538409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538227-538409:-1:exon

DK880_RS02060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rpmD
locus tag: DK880_RS02060
old locus tag: DK880_00418
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934286.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L30
translation: MQKIKITQVRSLIKRPKSQKDTMKALGLGRMARCVEHNATPQLLGMVKKINHLVVVEFIN
SIO_010081: DK880_RS02060
subclass of: SO_0000673
so part of: DK880_RS02060
location: complement(538227..538409)
location: region:538227-538409:-1
so has part: feature:538227-538409:-1:exon

WP_109997173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:538227-538409:-1:exon

DK880_RS02065
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rpsE
locus tag: DK880_RS02065
old locus tag: DK880_00419
so part of: sequence
location: complement(538421..538936)
location: region:538421-538936:-1
so has part: feature:538421-538936:-1:exon
subclass of: SO_0000010

position:538421:-1
position: 538421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538936:-1
position: 538936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538421-538936:-1:exon

DK880_RS02065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rpsE
locus tag: DK880_RS02065
old locus tag: DK880_00419
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934287.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S5
translation: MIVSGNKLKASDYNLEERVVATHRVTKVVEGGRRFSSSAVVVVGNGNGVVGYGLGKAKELTDAIAKGVEEAKRNLIKIPILRGTIPHDAIGKYGGGRVLIKPAASGTGVIAGGGVRIVLESVGIKNVLSKSQGSSNAHNVVKATFDALVQLRDPLTIAKQRGITLEQLFNG
SIO_010081: DK880_RS02065
subclass of: SO_0000673
so part of: DK880_RS02065
location: complement(538421..538936)
location: region:538421-538936:-1
so has part: feature:538421-538936:-1:exon

WP_109997174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:538421-538936:-1:exon

DK880_RS02070
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rplR
locus tag: DK880_RS02070
old locus tag: DK880_00420
so part of: sequence
location: complement(538942..539289)
location: region:538942-539289:-1
so has part: feature:538942-539289:-1:exon
subclass of: SO_0000010

position:538942:-1
position: 538942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539289:-1
position: 539289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538942-539289:-1:exon

DK880_RS02070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rplR
locus tag: DK880_RS02070
old locus tag: DK880_00420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010611200.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L18
translation: MVNSKVARRWRVRQRIRKHLAGTLERPRLSIFKSNTNIYVQLIDDVQGHTLLASSLQQLKLKQNNVAAALALGRFIAEQAIAKGIATVVLDRSGYIYHGKVRAIAEGAREKGLKF
SIO_010081: DK880_RS02070
subclass of: SO_0000673
so part of: DK880_RS02070
location: complement(538942..539289)
location: region:538942-539289:-1
so has part: feature:538942-539289:-1:exon

WP_109997700.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:538942-539289:-1:exon

DK880_RS02075
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rplF
locus tag: DK880_RS02075
old locus tag: DK880_00421
so part of: sequence
location: complement(539450..540010)
location: region:539450-540010:-1
so has part: feature:539450-540010:-1:exon
subclass of: SO_0000010

position:539450:-1
position: 539450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540010:-1
position: 540010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539450-540010:-1:exon

DK880_RS02075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rplF
locus tag: DK880_RS02075
old locus tag: DK880_00421
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018344546.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L6
translation: MARIGKKPIPLPQDVEVVPKEGGMVQVSGKKGVLQQWIDPTIGVQVEAGMVRVFPVGEGGTKHCNALHGLYRALLHNMVIGVSMGFKHTLELVGVGYRANLQGNLLELSLGYSHDIVFELPEEIAATTEVAKGKNPLIHLESIDKQLLGQVSAKIRSLRKVEPYKGKGIRFLGERVRRKAGKSTKK
SIO_010081: DK880_RS02075
subclass of: SO_0000673
so part of: DK880_RS02075
location: complement(539450..540010)
location: region:539450-540010:-1
so has part: feature:539450-540010:-1:exon

WP_109997175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:539450-540010:-1:exon

DK880_RS02080
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rpsH
locus tag: DK880_RS02080
old locus tag: DK880_00422
so part of: sequence
location: complement(540023..540427)
location: region:540023-540427:-1
so has part: feature:540023-540427:-1:exon
subclass of: SO_0000010

position:540023:-1
position: 540023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540427:-1
position: 540427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540023-540427:-1:exon

DK880_RS02080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rpsH
locus tag: DK880_RS02080
old locus tag: DK880_00422
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007654282.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S8
translation: MTTDPIADYLTRIRNAIAAGHKVVEIPASKIKVRLTEILQEKGYIYKHKVYTNPGKVSSVIKVLLKYDRQTKAAAIVKLKRISKPGLRKYATIATMPSVINGLGIAILSTSKGILSDKEARKMHVGGEVLCYVY
SIO_010081: DK880_RS02080
subclass of: SO_0000673
so part of: DK880_RS02080
location: complement(540023..540427)
location: region:540023-540427:-1
so has part: feature:540023-540427:-1:exon

WP_109997176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:540023-540427:-1:exon

DK880_RS02085
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rpsN
locus tag: DK880_RS02085
old locus tag: DK880_00423
so part of: sequence
location: complement(540499..540768)
location: region:540499-540768:-1
so has part: feature:540499-540768:-1:exon
subclass of: SO_0000010

position:540499:-1
position: 540499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540768:-1
position: 540768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540499-540768:-1:exon

DK880_RS02085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rpsN
locus tag: DK880_RS02085
old locus tag: DK880_00423
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009284809.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S14
translation: MAKESVKARDRKRRKLVDKYAVKRILFREQGDYLALDKLPKNASPVRLRNRCRVTGRARGYIRRFGISRLVFRQWALEGKLPGVQKVSW
SIO_010081: DK880_RS02085
subclass of: SO_0000673
so part of: DK880_RS02085
location: complement(540499..540768)
location: region:540499-540768:-1
so has part: feature:540499-540768:-1:exon

WP_109997177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:540499-540768:-1:exon

DK880_RS02090
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rplE
locus tag: DK880_RS02090
old locus tag: DK880_00424
so part of: sequence
location: complement(540780..541334)
location: region:540780-541334:-1
so has part: feature:540780-541334:-1:exon
subclass of: SO_0000010

position:540780:-1
position: 540780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541334:-1
position: 541334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540780-541334:-1:exon

DK880_RS02090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rplE
locus tag: DK880_RS02090
old locus tag: DK880_00424
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018476851.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L5
translation: MGKPRLQEKYFKEVVPQLKAELGYTSVMQVPRLQKICINQGLGEGVANKKLIQLGIEELTAITGQRAVATYAKRAVSNFKLRIGMPIGVKVTLRSQLMYEFLDRLIAIALPRIRNFWGLPTAGFDSNGNYTIGIQEQIIFPEVSIDKVAKVVGMNVTFVTTAQDKAIALQLLKALGMPFNMEKG
SIO_010081: DK880_RS02090
subclass of: SO_0000673
so part of: DK880_RS02090
location: complement(540780..541334)
location: region:540780-541334:-1
so has part: feature:540780-541334:-1:exon

WP_109997178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:540780-541334:-1:exon

DK880_RS02095
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rplX
locus tag: DK880_RS02095
old locus tag: DK880_00425
so part of: sequence
location: complement(541321..541674)
location: region:541321-541674:-1
so has part: feature:541321-541674:-1:exon
subclass of: SO_0000010

position:541321:-1
position: 541321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541674:-1
position: 541674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541321-541674:-1:exon

DK880_RS02095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rplX
locus tag: DK880_RS02095
old locus tag: DK880_00425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934293.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L24
translation: MRKTIQKRKKLPIRTGDRVKIIAGKHRNEQGIILRVLPSVQRAFVEGINLVARHLKPSAKNPKGSIVRKEASLHISNLMLVDPGSGLPTRIGRKYNGAGKLQRYAKKTGNFIENGQA
SIO_010081: DK880_RS02095
subclass of: SO_0000673
so part of: DK880_RS02095
location: complement(541321..541674)
location: region:541321-541674:-1
so has part: feature:541321-541674:-1:exon

WP_109997179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:541321-541674:-1:exon

DK880_RS02100
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rplN
locus tag: DK880_RS02100
old locus tag: DK880_00426
so part of: sequence
location: complement(541680..542048)
location: region:541680-542048:-1
so has part: feature:541680-542048:-1:exon
subclass of: SO_0000010

position:541680:-1
position: 541680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542048:-1
position: 542048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541680-542048:-1:exon

DK880_RS02100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rplN
locus tag: DK880_RS02100
old locus tag: DK880_00426
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007073026.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L14
translation: MIQQESIVKVADNSGAKTALCIRVLGGTRKRYARVGDKIVVTVKSANPSSTLKKGTLSKAVVVRARKEKRRKDGSYIRFEDNAIVLIDNNNEPKGTGVFGPVAREVRDRKFMKIASLADEVL
SIO_010081: DK880_RS02100
subclass of: SO_0000673
so part of: DK880_RS02100
location: complement(541680..542048)
location: region:541680-542048:-1
so has part: feature:541680-542048:-1:exon

WP_109997180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:541680-542048:-1:exon

DK880_RS02105
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rpsQ
locus tag: DK880_RS02105
old locus tag: DK880_00427
so part of: sequence
location: complement(542054..542308)
location: region:542054-542308:-1
so has part: feature:542054-542308:-1:exon
subclass of: SO_0000010

position:542054:-1
position: 542054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542308:-1
position: 542308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542054-542308:-1:exon

DK880_RS02105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rpsQ
locus tag: DK880_RS02105
old locus tag: DK880_00427
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934295.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S17
translation: MLRNKRKEKIGRVTSNKSDKTITVVMNARMIHPVYGKFVKTTTKFMAHDAANACHVGDLVKIMETRPVSKRKRWRLVEIMERAK
SIO_010081: DK880_RS02105
subclass of: SO_0000673
so part of: DK880_RS02105
location: complement(542054..542308)
location: region:542054-542308:-1
so has part: feature:542054-542308:-1:exon

WP_109997181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:542054-542308:-1:exon

DK880_RS02110
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rpmC
locus tag: DK880_RS02110
old locus tag: DK880_00428
so part of: sequence
location: complement(542295..542528)
location: region:542295-542528:-1
so has part: feature:542295-542528:-1:exon
subclass of: SO_0000010

position:542295:-1
position: 542295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542528:-1
position: 542528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542295-542528:-1:exon

DK880_RS02110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rpmC
locus tag: DK880_RS02110
old locus tag: DK880_00428
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017732358.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L29
translation: MQYKDIQALSYEAGKAKLQETVDYFLKLKFAHAVSPIEQPMKIRQARKLIARLKTAQRAIALRDSYEAVEKQCHVKK
SIO_010081: DK880_RS02110
subclass of: SO_0000673
so part of: DK880_RS02110
location: complement(542295..542528)
location: region:542295-542528:-1
so has part: feature:542295-542528:-1:exon

WP_109997701.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:542295-542528:-1:exon

DK880_RS02115
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rplP
locus tag: DK880_RS02115
old locus tag: DK880_00429
so part of: sequence
location: complement(542618..543046)
location: region:542618-543046:-1
so has part: feature:542618-543046:-1:exon
subclass of: SO_0000010

position:542618:-1
position: 542618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543046:-1
position: 543046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542618-543046:-1:exon

DK880_RS02115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rplP
locus tag: DK880_RS02115
old locus tag: DK880_00429
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012472400.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L16
translation: MLQPKRVRYRKTQKGKIKGLSMRGNTLEFGTFGIKALEPSYITARQIEAVRVVMTRTMKRQGQVWTRIFPDKPLTKKPAEVRMGKGKGAPDSFVAVVKPGKILFELDGVSDEVAAHAMRLAMHKLPIKVYFIKRKDYDSALV
SIO_010081: DK880_RS02115
subclass of: SO_0000673
so part of: DK880_RS02115
location: complement(542618..543046)
location: region:542618-543046:-1
so has part: feature:542618-543046:-1:exon

WP_109997182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:542618-543046:-1:exon

DK880_RS02120
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rpsC
locus tag: DK880_RS02120
old locus tag: DK880_00430
so part of: sequence
location: complement(543176..543874)
location: region:543176-543874:-1
so has part: feature:543176-543874:-1:exon
subclass of: SO_0000010

position:543176:-1
position: 543176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543874:-1
position: 543874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543176-543874:-1:exon

DK880_RS02120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rpsC
locus tag: DK880_RS02120
old locus tag: DK880_00430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010611208.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S3
translation: MGQKVHPIGFRLGFIRKPDASWFSSKKDYADNLMEDHKIRMYLDVRLARASVAKVLIERAGKKITITIHTARPGSVIGKSGTEVDKLKEALKQLTNKEVEVNIVEIKRLDLEAKLVATQIAQQVRGRLPFKRVVKQTIAAVMRSGAEGVKIKIAGRLDGAEMARSEQFREGAVPLHTLRNDIDYAIVEAHTIYGRIGIKVWIARGEVTLPVAGPLISSVDRIKPGKVLPAKA
SIO_010081: DK880_RS02120
subclass of: SO_0000673
so part of: DK880_RS02120
location: complement(543176..543874)
location: region:543176-543874:-1
so has part: feature:543176-543874:-1:exon

WP_109997183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:543176-543874:-1:exon

DK880_RS02125
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rplV
locus tag: DK880_RS02125
old locus tag: DK880_00431
so part of: sequence
location: complement(543947..544309)
location: region:543947-544309:-1
so has part: feature:543947-544309:-1:exon
subclass of: SO_0000010

position:543947:-1
position: 543947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544309:-1
position: 544309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543947-544309:-1:exon

DK880_RS02125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rplV
locus tag: DK880_RS02125
old locus tag: DK880_00431
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013408580.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L22
translation: MEAVAKLKYLPISARKVALLADLVRGKRVSIALAALQNSPQQAAVQLRKLLLSAMANWYAKHSHTAVEEAPMVVKKITVDRAGMLKRIMPAPRGVAHRIRRRSSHVVVVVGSQVEQFAIG
SIO_010081: DK880_RS02125
subclass of: SO_0000673
so part of: DK880_RS02125
location: complement(543947..544309)
location: region:543947-544309:-1
so has part: feature:543947-544309:-1:exon

WP_109997184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:543947-544309:-1:exon

DK880_RS02130
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rpsS
locus tag: DK880_RS02130
old locus tag: DK880_00432
so part of: sequence
location: complement(544318..544584)
location: region:544318-544584:-1
so has part: feature:544318-544584:-1:exon
subclass of: SO_0000010

position:544318:-1
position: 544318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544584:-1
position: 544584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544318-544584:-1:exon

DK880_RS02130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rpsS
locus tag: DK880_RS02130
old locus tag: DK880_00432
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934300.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S19
translation: MGRSIKKGAYVAHHLQHKIDRLNESNKKTVVKTWSRRSTITPDFVGHTFAVHNGRKFIPVFVTEAMVGHKLGEFALTRMFKGHTFKKR
SIO_010081: DK880_RS02130
subclass of: SO_0000673
so part of: DK880_RS02130
location: complement(544318..544584)
location: region:544318-544584:-1
so has part: feature:544318-544584:-1:exon

WP_109997185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:544318-544584:-1:exon

DK880_RS02135
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rplB
locus tag: DK880_RS02135
old locus tag: DK880_00433
so part of: sequence
location: complement(544584..545414)
location: region:544584-545414:-1
so has part: feature:544584-545414:-1:exon
subclass of: SO_0000010

position:545414:-1
position: 545414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544584-545414:-1:exon

DK880_RS02135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rplB
locus tag: DK880_RS02135
old locus tag: DK880_00433
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934301.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L2
translation: MPLLKKLNPTTPGQRFRVAPSFATVITTNKPEKSLLGKAKRSGGRNNRGRITVPHRGGGHKRRARLIDFKRQKFEIPAVVHSIEYDPMRTAYIALLHYVDGAKAYILAPEGLQVGARVMAGSGVPIQVGNAMAMKDMPLGTMIHNIELSPGRGAALVRSAGASAQLLSKSGKYVTIKLPSGERRLVLDRCMATIGSVSNSAHVHVTMAKAGRSRWLGRRPRVRAVAMNPVDHPMGGGEGKASGGHPRSSKGLYAKGKKTRDRHKYSTKLIVGKKKR
SIO_010081: DK880_RS02135
subclass of: SO_0000673
so part of: DK880_RS02135
location: complement(544584..545414)
location: region:544584-545414:-1
so has part: feature:544584-545414:-1:exon

WP_109997186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:544584-545414:-1:exon

DK880_RS02140
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rplW
locus tag: DK880_RS02140
old locus tag: DK880_00434
so part of: sequence
location: complement(545573..545863)
location: region:545573-545863:-1
so has part: feature:545573-545863:-1:exon
subclass of: SO_0000010

position:545573:-1
position: 545573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545863:-1
position: 545863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545573-545863:-1:exon

DK880_RS02140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rplW
locus tag: DK880_RS02140
old locus tag: DK880_00434
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012472405.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L23
translation: MSILKRPLVTEKASLLNKRGVYGLIVDSRSNKEQIRKEIERFYSVKVDSIHTMRYAGKKRIKRTAAFVAKGKRPAYKKAFVTLKEGGSIDFYSNIV
SIO_010081: DK880_RS02140
subclass of: SO_0000673
so part of: DK880_RS02140
location: complement(545573..545863)
location: region:545573-545863:-1
so has part: feature:545573-545863:-1:exon

WP_109997187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:545573-545863:-1:exon

DK880_RS02145
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rplD
locus tag: DK880_RS02145
old locus tag: DK880_00435
so part of: sequence
location: complement(545869..546495)
location: region:545869-546495:-1
so has part: feature:545869-546495:-1:exon
subclass of: SO_0000010

position:545869:-1
position: 545869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546495:-1
position: 546495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545869-546495:-1:exon

DK880_RS02145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rplD
locus tag: DK880_RS02145
old locus tag: DK880_00435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934303.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L4
translation: MELSVLKYTGEETGRMAVLPPEIFDIEPNEHVVHLDVKSILAGKRQGTHQSKERGAVSGSRRKIKRQKGSGTARAGDIKSPLFRGGGRIFGPKPRNYGFKLNAKVKKLARKSALTYKARARTIAVLESFSFEQAKTKAYLDFLQNLSCLDERTLLLLPSVDKNIVLSSRNIKKAKVCCVDHVNTYDLLQAAKLLIVESAIEPMVRKLT
SIO_010081: DK880_RS02145
subclass of: SO_0000673
so part of: DK880_RS02145
location: complement(545869..546495)
location: region:545869-546495:-1
so has part: feature:545869-546495:-1:exon

WP_109997188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:545869-546495:-1:exon

DK880_RS02150
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rplC
locus tag: DK880_RS02150
old locus tag: DK880_00436
so part of: sequence
location: complement(546497..547129)
location: region:546497-547129:-1
so has part: feature:546497-547129:-1:exon
subclass of: SO_0000010

position:546497:-1
position: 546497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547129:-1
position: 547129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546497-547129:-1:exon

DK880_RS02150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rplC
locus tag: DK880_RS02150
old locus tag: DK880_00436
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011586511.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L3
translation: MIGIIGKKIGMTSLYDGKGHKQACTVIQGGPCVVTQLKTLSVDGYQAVQLAYDDKKEKNTTKPLLGHFSKASTTPKRKQVEFSYADEAWPQQLALGQLVRLADIFEEGEFVDVVGRSKGKGFQGVVKRHGFSGVGGRSHGQHNRERAPGSIGANSDPSRVFKGMRMGGRTGGNRVKVKNLKVMKILPEKDLIVLCGAVPGAHNSYVILEK
SIO_010081: DK880_RS02150
subclass of: SO_0000673
so part of: DK880_RS02150
location: complement(546497..547129)
location: region:546497-547129:-1
so has part: feature:546497-547129:-1:exon

WP_109997189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:546497-547129:-1:exon

DK880_RS02155
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02155
old locus tag: DK880_00437
so part of: sequence
location: complement(547348..547914)
location: region:547348-547914:-1
so has part: feature:547348-547914:-1:exon
subclass of: SO_0000010

position:547348:-1
position: 547348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547914:-1
position: 547914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547348-547914:-1:exon

DK880_RS02155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02155
old locus tag: DK880_00437
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARRSIAIELFYTAIQEEKYFHTGFLRKPTGINGEILATWLYPLADKVLLQLPALFVERNHVKVPYVIQRSIPLTEKQSVLTLKGISSKTEAYWLRNLPLFLPLPLQPTEESSAELAAIVGYVVEDQLLGQLGKVESIHCMRNKYVVSLTYKGKELLIPYEAPFLVDVNDKQQTITVALPEDYLTVML
SIO_010081: DK880_RS02155
subclass of: SO_0000673
so part of: DK880_RS02155
location: complement(547348..547914)
location: region:547348-547914:-1
so has part: feature:547348-547914:-1:exon

WP_109997190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547348-547914:-1:exon

DK880_RS02160
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: ssrA
locus tag: DK880_RS02160
old locus tag: DK880_00439
so part of: sequence
location: complement(548049..548475)
location: region:548049-548475:-1
so has part: feature:548049-548475:-1:exon
subclass of: SO_0000659

position:548049:-1
position: 548049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548475:-1
position: 548475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548049-548475:-1:exon

DK880_RS02160
type: Transfer Messenger RNA
subclass of: SO_0000584
RO_0002162: 247481
gene: ssrA
locus tag: DK880_RS02160
old locus tag: DK880_00439
product: transfer-messenger RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00023
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: DK880_RS02160
subclass of: SO_0000673
so part of: DK880_RS02160
location: complement(548049..548475)
location: region:548049-548475:-1
so has part: feature:548049-548475:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:548049-548475:-1:exon

DK880_RS02165
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: sufB
locus tag: DK880_RS02165
old locus tag: DK880_00440
so part of: sequence
location: complement(548558..550006)
location: region:548558-550006:-1
so has part: feature:548558-550006:-1:exon
subclass of: SO_0000010

position:548558:-1
position: 548558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550006:-1
position: 550006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548558-550006:-1:exon

DK880_RS02165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: sufB
locus tag: DK880_RS02165
old locus tag: DK880_00440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009194364.1
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fe-S cluster assembly protein SufB
translation: MVQQTKDILESISSSEYQYGFESNIPVDTIPRGLTADTIRLIAERKQEPAWLLDRRLQAFHYFMQLKAPTWAKVNYPPIDYQAIIYYAEPKQKVKLNSLEEADPLLLATFQRLGISLEEQRRLAGVAMDIVLDSVSVATTFKETLNRLGIIFCSFSEAVQEHPELVQRYLGKVVPMTDNYFAALNTAVFSDGSFCFIPKGVHCPMELSTYFRINAVNTGQFERTLIIAEEDSYVSYLEGCTAPMRDENQLHAAVVEIYAAKGAHVRYATVQNWYPGNKEGVGGVYNFVTKRGLCAGAHAKISWTQVETGSAITWKYPSCILMGDHSIGEFYSVAVTKNKQQADTGTKMIHIGKHTKSRIVSKGIAAGCSSNSYRGLVKLTVAAAHSTNFSQCDSLLIGNHCGAHTFPYIEVKNPTGQVAHEATTSKISADQLFYCNQRGIEQEQAIALIVNGYCREVLKQLPMEFAVEAQKLLALTLEGSVG
SIO_010081: DK880_RS02165
subclass of: SO_0000673
so part of: DK880_RS02165
location: complement(548558..550006)
location: region:548558-550006:-1
so has part: feature:548558-550006:-1:exon

WP_109997191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:548558-550006:-1:exon

DK880_RS02175
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02175
old locus tag: DK880_00441
so part of: sequence
location: complement(550901..551509)
location: region:550901-551509:-1
so has part: feature:550901-551509:-1:exon
subclass of: SO_0000010

position:550901:-1
position: 550901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551509:-1
position: 551509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550901-551509:-1:exon

DK880_RS02175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02175
old locus tag: DK880_00441
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAFLYAINGISGTPRQKITDFIAEYFKKKEKKVTRIADPKGSNYGKLANNIVVNHAITLSAFTEALLYLTCSKEIFDQIDWHNHDIVVSKGSFLETFGYPNQLADWELEEARKFFFLFSKHINHTYPLLSIILTEDYIAAEKRAGKKFEYKDAQEKYLSDSNRFLRIKEHPIMQEIGIQLVNVEIKSRDPWKVFQEEIEPIL
SIO_010081: DK880_RS02175
subclass of: SO_0000673
so part of: DK880_RS02175
location: complement(550901..551509)
location: region:550901-551509:-1
so has part: feature:550901-551509:-1:exon

WP_109997193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:550901-551509:-1:exon

DK880_RS05170
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05170
old locus tag: DK880_00442
so part of: sequence
location: complement(551600..551980)
location: region:551600-551980:-1
so has part: feature:551600-551980:-1:exon
subclass of: SO_0000010

position:551600:-1
position: 551600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551980:-1
position: 551980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:551600-551980:-1:exon

DK880_RS05170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05170
old locus tag: DK880_00442
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNIMVQAAFHLYRSTMFSLPFHGVITANAYKAIAAQIVLGKLKNGAHTNPVILNILFLKSVVCSLYWERNACKHMVIVALLKHMNQNNPSLADNPIFNIQKDMEAIPIEQIDNLFRLKGFGTRLPI
SIO_010081: DK880_RS05170
subclass of: SO_0000673
so part of: DK880_RS05170
location: complement(551600..551980)
location: region:551600-551980:-1
so has part: feature:551600-551980:-1:exon

WP_162534117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:551600-551980:-1:exon

DK880_RS05175
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05175
old locus tag: DK880_00444
so part of: sequence
location: 552150..552467
location: region:552150-552467:1
so has part: feature:552150-552467:1:exon
subclass of: SO_0000010

position:552150:1
position: 552150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552467:1
position: 552467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552150-552467:1:exon

DK880_RS05175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05175
old locus tag: DK880_00444
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVGHFILSFILFLCGLYSDRAEIIIFCWVLASPFAGTIFDIDTMFGKKYGRKTVRYAEAMGHVWGSIVGMVLFSLLKDIKYIMYASALIAHALQIKKYIIKKRNI
SIO_010081: DK880_RS05175
subclass of: SO_0000673
so part of: DK880_RS05175
location: 552150..552467
location: region:552150-552467:1
so has part: feature:552150-552467:1:exon

WP_162534118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:552150-552467:1:exon

DK880_RS02185
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02185
old locus tag: DK880_00445
so part of: sequence
location: 552464..553807
location: region:552464-553807:1
so has part: feature:552464-553807:1:exon
subclass of: SO_0000010

position:552464:1
position: 552464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553807:1
position: 553807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552464-553807:1:exon

DK880_RS02185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02185
old locus tag: DK880_00445
inference: COORDINATES: protein motif:HMM:NF019310.2
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MISFVHAHGNFIIANLIFLLLSLSQNSISLLLPSIQEEMLLSANDQQWIINIPFVITTIFMTLLGKITDICNRMPIVRLSLLSFLLGNSIAALSTTFFPFFIGRMLQGFGAAVLLPQSYVLIKQGKRKANDILFSYFMGITTLFLIVGPGVAGTICALLGWRWVFWIGGIFSLFILLIAIYTPDCKTSEKKIAEKIDYLGALLMAVLSLSSIFCISTLSHSIFLLWGLVAVISLLFLKKHLGTCSWPIMDVTLFKRASLFVYTMVLCSMQITMASTYIVSFALQHIFNLNPAASGILLTITIAPSILVSFLSSYIQKRFRTTQIIRTSLVMLILGNLLIGCAGYYHTIHLLTVSRFIISFFISILLSVGMTVILNKVPIAQQGTVSSLVYQFREFSNMFCVAVMHAIAFCSQQSIQIMTGTRFALSMLIPTLAAFVALLFFHKNKGH
SIO_010081: DK880_RS02185
subclass of: SO_0000673
so part of: DK880_RS02185
location: 552464..553807
location: region:552464-553807:1
so has part: feature:552464-553807:1:exon

WP_109997195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:552464-553807:1:exon

DK880_RS02190
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02190
old locus tag: DK880_00446
so part of: sequence
location: 553819..554943
location: region:553819-554943:1
so has part: feature:553819-554943:1:exon
subclass of: SO_0000010

position:553819:1
position: 553819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554943:1
position: 554943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553819-554943:1:exon

DK880_RS02190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02190
old locus tag: DK880_00446
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: radical SAM/SPASM domain-containing protein
translation: MKQKIDIIWNTTLLCMWDCPICCVDAVHVRSKGDNIYIASKGLTKIDVIPKRKELSIFDQALTFRQTQGLELNLKEKLTILAHLSAFDSKIDFSGGDPMALSENLEVIKEASKMFGRNNITMTATGAGLARVDPSKIIDFIGELNITYDRASSIINQERPKQYATSNLVWGRKYKELGMKIRAEIPLTSDNLNDEAALKKLYVHLHEANIDTLLVMRFFSVGRGHNLTETTPTPKQYRQAINIFKLLEKEYGYPKIKLQCALKFFDDDYKDTLKINPCDAVRTSFGLMPDETLLASPWAINNRGKPLDDVWILGNLLKEPLESILAQEKAKVFLRRQNENFGQCKIHAFLASRKEKKIDRIFDTQDPLYVHAGG
SIO_010081: DK880_RS02190
subclass of: SO_0000673
so part of: DK880_RS02190
location: 553819..554943
location: region:553819-554943:1
so has part: feature:553819-554943:1:exon

WP_109997196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:553819-554943:1:exon

DK880_RS02195
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02195
old locus tag: DK880_00447
so part of: sequence
location: 555046..555882
location: region:555046-555882:1
so has part: feature:555046-555882:1:exon
subclass of: SO_0000010

position:555046:1
position: 555046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555882:1
position: 555882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555046-555882:1:exon

DK880_RS02195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02195
old locus tag: DK880_00447
inference: COORDINATES: protein motif:HMM:NF015912.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor region1.1 domain-containing protein
translation: MHKQEIEVRNMLIASKLPDTDYVINPYIGCTYGCSYCYASFMGRFVKQPIANWGKYIYVKKNAVALLKDTIVKLDNTKKQRSILLSSVTDPYQPIEQRYQLTRGLLEVLAKAKYPGRISVLTKSPLVLRDTDLLAQLDNKEIGLTITSSDDTLTDQLELNAPKVSIRLQTLAQLKKEGFITYAFIGPILPHFYLYPKKIENIFSKLADTGINSLFVEHMNISPYIYKKIIQNHKLSEEEKQAYKNNKTKIFHTEIQRIIDTLMIKYNFRLRTSQIIQH
SIO_010081: DK880_RS02195
subclass of: SO_0000673
so part of: DK880_RS02195
location: 555046..555882
location: region:555046-555882:1
so has part: feature:555046-555882:1:exon

WP_109997197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:555046-555882:1:exon

DK880_RS02205
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02205
old locus tag: DK880_00448
so part of: sequence
location: complement(556357..556644)
location: region:556357-556644:-1
so has part: feature:556357-556644:-1:exon
subclass of: SO_0000010

position:556357:-1
position: 556357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556644:-1
position: 556644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556357-556644:-1:exon

DK880_RS02205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02205
old locus tag: DK880_00448
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPTKKEGEKYLEGHIKRIAALLGMTPKEAEELKEGAQRMKKWIKNEIDSCINFIFPKKAKEEAARRTAEEERRKAAFWEEYRRERAAIAKEETMD
SIO_010081: DK880_RS02205
subclass of: SO_0000673
so part of: DK880_RS02205
location: complement(556357..556644)
location: region:556357-556644:-1
so has part: feature:556357-556644:-1:exon

WP_109997198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:556357-556644:-1:exon

DK880_RS05180
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05180
so part of: sequence
location: 556664..556819
location: region:556664-556819:1
so has part: feature:556664-556819:1:exon
subclass of: SO_0000010

position:556664:1
position: 556664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556819:1
position: 556819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556664-556819:1:exon

DK880_RS05180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05180
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVPSEGGRVIKMIGIGGSGGIYTLGSVLSSGPGISVRSVTESPLPLQMVNY
SIO_010081: DK880_RS05180
subclass of: SO_0000673
so part of: DK880_RS05180
location: 556664..556819
location: region:556664-556819:1
so has part: feature:556664-556819:1:exon

WP_162534120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:556664-556819:1:exon

DK880_RS02210
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02210
old locus tag: DK880_00449
so part of: sequence
location: complement(557068..560586)
location: region:557068-560586:-1
so has part: feature:557068-560586:-1:exon
subclass of: SO_0000010

position:557068:-1
position: 557068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560586:-1
position: 560586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557068-560586:-1:exon

DK880_RS02210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02210
old locus tag: DK880_00449
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MMASLYHNAPILIVIAFLLLTLTVGIYFHKKTTTLREYAVGNKKFATATLVATMLATKFGGDNMPLDVVEIHNRGINWIFIALSTSVPFLLLSRLVLRMGPFMQHLSMPETIGSVYGTYPRIVTVLSCICNSIAGIALEITVISRAIAMCIPSCAPQTIQYMTLLATAVLIFYSCFGGIRSVTFTDVLQFITFTLVIPFLAIFMIQKINKPFSDIIPFLQSQPQFQLSSLFHCNTRSISTLSMALSLSVVYMEHSNIQRIYMASDVLQAQRVCRYVSIFSLIITVCIILIGIAAFIAAPTLPSTEIWTYIMQHIPPFFKGFLAISLLAMAMSTADSDLNACSVIVSHDVYGSLQHVKRIAVLSPLLLARCATIVVGLSAMFLAFKYNNLLELLRLLINFFVPVVTAPFLLAVYGFRGSSRTALIGMATGIGAILAWKQWIESTTDIDGSFFCMLANGLAMLVAHYLLPQPAGTGWLPPDKIYLQRQQEKKRIARRNKKERTIFFTKENLAKLKPNAITLVLVGIYLIVSSLVSSCYYNAQKTVWACIPFFMLGVAHIGYVAFFANKIPDEAIGKYWFISVLVGFPFHLLLSCCLCETLLVPFILFFTHGTVLLWTLPFYWSLRALAITTGGMLIAICCCKATVVWPDPMIVLPLVGVGSFLVMSVVYFKKQNRIQQERVAYFLQKQATQEAYELKKLAYSEELPTASPQNTLAQEGTILEKAIQNVTQSIAFVDSTTPFLKEDFQSILDKFAEWAYYLKQRAKRQDQLLLQPSIILLEALIDAGEVAYQKEKGYLPGLWVEEVVHIPDTMLGDREQLVRLLFLALNHVRQSSASFRSPITLQLQLTQLRYKKREPLEADGSPACISFPALALIFVGEKSMPTLQAVYDVEDASTTQPVDPFVSPQKVNLHKENLASIVYAHYGFLLLPHAEQLVCLLPLDVSQVREEMLALSLPREAGTQEEASITPHEKTASLATLSAFHDWIPSFESIDPFLIAEILLLLRRCYGFKRHASGQLFYVRAVGIAEWVAAWTDGHAKLVYATLLYDLVRYTRLPLSYIKANYHLIVYCFVENTIAIDSRKRLEESLLAIANRFKESLQKEHISVLYVKLAERLYDLKHASGYKDPSIVQAMAKESLTIDVELAQRYGEPGMAILLKHAAEEALAGDKPTKPI
SIO_010081: DK880_RS02210
subclass of: SO_0000673
so part of: DK880_RS02210
location: complement(557068..560586)
location: region:557068-560586:-1
so has part: feature:557068-560586:-1:exon

WP_162534121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:557068-560586:-1:exon

DK880_RS02220
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02220
old locus tag: DK880_00450
so part of: sequence
location: complement(561458..564991)
location: region:561458-564991:-1
so has part: feature:561458-564991:-1:exon
subclass of: SO_0000010

position:561458:-1
position: 561458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564991:-1
position: 564991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:561458-564991:-1:exon

DK880_RS02220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02220
old locus tag: DK880_00450
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MTLFNNLPLVMVMAFLLLTLVVGLYYSRKVTAFREYAIGNKDFATATLVATMLATSFGGGGLLRSVEQTYAQGLFWILWGFSASVGFWILTPLMLRMGPFMQHFSLAESIGSIYGRLPRFVTALVSIIQETIIVAIQIIAISMAIEICMNLSSSNNMMIQTSITVIATLILILYSMFGGIRSVTFTDVLQFITFTAVIPLVAWFIFRATNQSMVEVTSILHKEPKFQLGNCLHMDKLLGIVALFLTNLASFIQPTTVQRIYMASSPIQARKLFLYSGIFSMVIDGFMTLIALFLFVKAPTLAKDQIWPYVFENTPVILKGFIAISLLAMAMSTADSSLNACAVMISHDIVGGVQVKRVITDKHKLVLARLTVLIVGICAMLLVFRERDLLELLKFIFDFSVPIVTAPFFLAIYGFRGSSRTALIGMLTGVLAILVWKQWVEPRINIDGAFPSMLANGLAMLAAHYLLPQPAGTGWVPPDKIYQQRQQERARIKRRNKQERQNFFLKAQLAKFKPSRTGLLLSGIYLLVIGVATFGYCYDYSQSLYSYSLLLLPCMGLLYMGCSVYGYQTIPDGAIGKYWFFSLLTSLPMHLLLNCCLTDELLVPLVLFFTHGTVLLWALPLYWSLRGVLVTMGTMMVICFCKSTILWPSPIILFSLLVAGLCLLIWIVYVKQQNRIQQERVAYFLQKQATQEAYELKKLAYSEELPTASPQNTLAQEGTILEKAIQNVTQSIAFVNSTIPFLKEDFQSIIDKFAEWAYYLKQRAKRQDQLLLQPSIILLEALIDAGEVAYQKEKGYLPGLWIEESVNIPTTMLGDREQLVQLLFLAFSYVRQSSVSFRFPITLQLQLTQLRYKKREPLEADGDPACITFPALALVLHTENKQIPLPTLQAVYDVESPATTQPVDPFVSPQKVNLHKENLASIVHAHYGLLLLPHAEQLICLLPLDVSQVREEMLALSLPREAGTQEEASITPHEKTASLARLSSFHDWIPSFESIDPFLIAEILLLLRRCYGFKRHASGQLFYVRAVGIAEWVAAWTDGHAKLVYATLLYDLVRYTRLPLSYIKANYHLIVYCFVENTIAIDSRKRLEESLLAITNRLKESLQKEYFSVLYVKLAERLYDLKHASGYKDPTIVQAMAKESLTIDVELAQRYGEPGMAILLKQAAEEALAGAKPTEPI
SIO_010081: DK880_RS02220
subclass of: SO_0000673
so part of: DK880_RS02220
location: complement(561458..564991)
location: region:561458-564991:-1
so has part: feature:561458-564991:-1:exon

WP_109997200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:561458-564991:-1:exon

DK880_RS02225
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02225
old locus tag: DK880_00451
so part of: sequence
location: complement(565436..566524)
location: region:565436-566524:-1
so has part: feature:565436-566524:-1:exon
subclass of: SO_0000010

position:565436:-1
position: 565436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566524:-1
position: 566524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565436-566524:-1:exon

DK880_RS02225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02225
old locus tag: DK880_00451
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVEVTSILHKEPKFQLGNCLGINKLLSIIALFLATVAFRIQPTIVQWIYMASSPIQARKLFLYSGIFSLVIEGFIVLIGLFLFVKAPTLAKDQIWPYVFENTPVILKGFIAISLLAMAMSTADSLLNVCAVMVSHDIVGGVQVKRVITDKHKLVLARVTVLVVGICAMLLVFRERDLLELLKFIFDFSVPIVTAPFFLAIYGFRGSSRTALIGMLTGVLAILVWKQWVEPRINIDGAFPSMLANGLAMLAAHYLLPQPAGTGWIPPDKIYQQRQQEKARIKRRSKQERQNFFLKAQLAKFKPSRTGLLLSGIYLLVIGVATFGYCYDYSQSLYSYSLLLLPCMGLLYMGCSVYGYQTIPDWV
SIO_010081: DK880_RS02225
subclass of: SO_0000673
so part of: DK880_RS02225
location: complement(565436..566524)
location: region:565436-566524:-1
so has part: feature:565436-566524:-1:exon

WP_109997201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:565436-566524:-1:exon

DK880_RS02230
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02230
old locus tag: DK880_00452
so part of: sequence
location: complement(566600..566938)
location: region:566600-566938:-1
so has part: feature:566600-566938:-1:exon
subclass of: SO_0000010

position:566600:-1
position: 566600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566938:-1
position: 566938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:566600-566938:-1:exon

DK880_RS02230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02230
old locus tag: DK880_00452
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018474675.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MerR family transcriptional regulator
translation: MLLSEKKYFTIREVSQHFAVAPSLIRYWEKEFKPIFQPNKNSKGARRYTAEDLTQFSYIYHLVKEKGYSLAGARKVMQKRHTLASIPPAEVVQRLHKLRAFLLKLKEQIGKR
SIO_010081: DK880_RS02230
subclass of: SO_0000673
so part of: DK880_RS02230
location: complement(566600..566938)
location: region:566600-566938:-1
so has part: feature:566600-566938:-1:exon

WP_109997202.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:566600-566938:-1:exon

DK880_RS02235
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02235
old locus tag: DK880_00453
so part of: sequence
location: complement(566929..567891)
location: region:566929-567891:-1
so has part: feature:566929-567891:-1:exon
subclass of: SO_0000010

position:566929:-1
position: 566929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567891:-1
position: 567891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:566929-567891:-1:exon

DK880_RS02235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02235
old locus tag: DK880_00453
EC number: 3.4.24.-
inference: COORDINATES: protein motif:HMM:NF013700.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M23 family metallopeptidase
translation: MRKARYYYSPVTCSYERVKASPWLFVVRTGLLFSCAFVLACFMVRYYRSCFSSPKEIELLEDNKQLQAYYNTVQQHIEKCNTLLVALQERDDTFRLLLGKEPLSVVERNAGIGGVNKYAHLCNNALISQTLSKLDQLTSKLTIQKKSCDSLLKFAQQSERKFKSMPTFPPVSKKHLKRISGTFGMRFHPIFKIPKMHEGVDFAAPIRAPIYAAADGRVKWIKSEKKGFGNHLLIEHDNGFQTLYAHMHTIDVEGKQRVVRGQQIGLVGNSGHSTAPHLHYEVYHNGNRVDPLLYLVEGLTDVEYEEIRRKAAQQTQTLCY
SIO_010081: DK880_RS02235
subclass of: SO_0000673
so part of: DK880_RS02235
location: complement(566929..567891)
location: region:566929-567891:-1
so has part: feature:566929-567891:-1:exon

WP_109997203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:566929-567891:-1:exon

DK880_RS02240
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: dnaK
locus tag: DK880_RS02240
old locus tag: DK880_00454
so part of: sequence
location: complement(568481..570394)
location: region:568481-570394:-1
so has part: feature:568481-570394:-1:exon
subclass of: SO_0000010

position:568481:-1
position: 568481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570394:-1
position: 570394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568481-570394:-1:exon

DK880_RS02240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: dnaK
locus tag: DK880_RS02240
old locus tag: DK880_00454
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012472654.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molecular chaperone DnaK
translation: MGKIIGIDLGTTNSCVAVMEGNEPVVIANNEGKRTTPSIVAFLNEGKGERKTGDPAKRQAIINPNNTIASIKRFMGKDYGSVQNEIKEVAYKVEEGSNHTVRVRIGDKLYTPQEISAVILQKMKSSAEDYLGTTVTEAVITVPAYFNDAERQATKEAGEIAGLTVKRIINEPTAAALAYGLDRQNKDMTIAVFDLGGGTFDVSILELGEGVFEVKSTNGDIHLGGDDFDQKITNWLADNFQKEEGVNLRKDPTALQRLREAAEKAKIELSSATTTEINLPYITAIDGVPKHLVQRLSRAQFEQLVDDLVQRTLDPCKQALRDAFGDIANPQQKIHEVILVGGSTRIPKIQEEVERFFGKKPSKGVNPDEVVAIGAAIQGGVLTGEVKDILLLDVIPLSLGIETLGGVFTKLIEANTTIPIKRSEVFSTATDNQSSVMVHVLQGNRSMAKHNRTIGQFHLSEIPPAPKGVPQIEVTFDVDANGILHVSAKDRGTGREQKIRIEASSGLTEAEIKRMKSEAELNAATDKTERETVDKINQADSLIFDVEKQLKELDDKVEETDKQNVTAGIAALQTAKEAKDLPALDKALEALNKIWVDVMTRSYQKVHAAQEAAGSQKPDAAGKEEKEATEAEFEEIK
SIO_010081: DK880_RS02240
subclass of: SO_0000673
so part of: DK880_RS02240
location: complement(568481..570394)
location: region:568481-570394:-1
so has part: feature:568481-570394:-1:exon

WP_109997204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:568481-570394:-1:exon

DK880_RS02245
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: smpB
locus tag: DK880_RS02245
old locus tag: DK880_00455
so part of: sequence
location: complement(570671..571135)
location: region:570671-571135:-1
so has part: feature:570671-571135:-1:exon
subclass of: SO_0000010

position:570671:-1
position: 570671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571135:-1
position: 571135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:570671-571135:-1:exon

DK880_RS02245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: smpB
locus tag: DK880_RS02245
old locus tag: DK880_00455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934515.1
GO function: GO:0003723 - RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SsrA-binding protein SmpB
translation: MSGKKILFSARVCIKNRRAAFEYTFLDRYTAGLILQGTEIKSIRMGKVSLQESYCYFHQGAFRVKGMYIAPYRQGNIYNHEEARDRTLLLQKKEIEKLLKSQVKGVTIIPLQLFINARGFAKLEIALARGKKIYDKRQTIKERDLERAGMHSNG
SIO_010081: DK880_RS02245
subclass of: SO_0000673
so part of: DK880_RS02245
location: complement(570671..571135)
location: region:570671-571135:-1
so has part: feature:570671-571135:-1:exon

WP_109997205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:570671-571135:-1:exon

DK880_RS02250
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02250
old locus tag: DK880_00456
so part of: sequence
location: 571293..572948
location: region:571293-572948:1
so has part: feature:571293-572948:1:exon
subclass of: SO_0000010

position:571293:1
position: 571293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572948:1
position: 572948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571293-572948:1:exon

DK880_RS02250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02250
old locus tag: DK880_00456
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012472945.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AMP-binding protein
translation: MINTPGIKQNPFSVPCNIDVTKYRSFIHLMEDMVARYGNLPMCENMGKILTFRTVDKLSKIFAAYLQQYTSLKVGSTVAIQLPNLLQYPIVLLGMLRAGLVVVNINPQYTSHEMLHQLKDAKAQAIIVLENFAHKLAEILPDTAIQTVIITTVGDMLGAFKGKILNFIIKYIKKLVPAYHLPGAVSFKQALAKGEKVVFLPVDLQASDTALLQYTGGTTGVAKGAVLSHGNLTTNIQQVAATLGFVLKEKKERVIIPLPLYHIFGLSSLFTMAQLGARCLLITNPRDIHRLIKEWLAYQPTCLIGVNTLFTKLLADKKFGALCFHTFKYTFSGGMQTYETVKKQWEDLTTSKLIEGYGLTECAPGVASNIHNSTHYIPLPNTHVRIATAKGEAVPYGTAGELLVKGPQVTRSYWHKPSETEETFVDGWLRTGDIAIMDEKGFILVDRKKDMVNISGFNVYPNEIEQVLMGHPKVLEVGAIGVADISLKEAIKVFIVKKDATLTAEEIIAYCKERMTRYKIPKYIEFCKTLPKSNIGKVLRKLLKQYQEEKV
SIO_010081: DK880_RS02250
subclass of: SO_0000673
so part of: DK880_RS02250
location: 571293..572948
location: region:571293-572948:1
so has part: feature:571293-572948:1:exon

WP_109997206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:571293-572948:1:exon

DK880_RS02255
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: mraY
locus tag: DK880_RS02255
old locus tag: DK880_00457
so part of: sequence
location: 573008..574225
location: region:573008-574225:1
so has part: feature:573008-574225:1:exon
subclass of: SO_0000010

position:573008:1
position: 573008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574225:1
position: 574225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573008-574225:1:exon

DK880_RS02255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: mraY
locus tag: DK880_RS02255
old locus tag: DK880_00457
EC number: 2.7.8.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020607214.1
GO function: GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospho-N-acetylmuramoyl-pentapeptide- transferase
translation: MLYYLFDYLHDAFHWPGTGLFKYISFRAAMALLGSFTTTFLLGQRFIDYLRKKQIIENNRALGFSTTAKANTPTMGGFLIILATVLPTLLFSKWHNVYIILLLTTTICMGLVGYLDDYIKVIQQKKKGLNGWIKIAGQIVLGCIVGSTLYFHKDVVIRETVEIVASVAADQTIPSPYRDKKSTQTTIPFFKERTLDYAQLSHYLLGKEGYTWIVYVLIVIFIIAAVSNGANLTDGLDGLATTTAIVISTTLAIMAYLSGHIIFAKYLCIMYIPHLGELTIFCSAFVGACMGFLWYNSYPAQIFMGDTGSLTIGAVIAVVAICIRKELLLPLLCGLFVIENLSVILQTGYFKYTRKRYGYGKRIFKMAPIHHHYQKLGWHEAKIVTRFLIINLLLAIVTLVTLKIR
SIO_010081: DK880_RS02255
subclass of: SO_0000673
so part of: DK880_RS02255
location: 573008..574225
location: region:573008-574225:1
so has part: feature:573008-574225:1:exon

WP_109997207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:573008-574225:1:exon

DK880_RS02260
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02260
old locus tag: DK880_00458
so part of: sequence
location: 574630..574854
location: region:574630-574854:1
so has part: feature:574630-574854:1:exon
subclass of: SO_0000010

position:574630:1
position: 574630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574854:1
position: 574854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:574630-574854:1:exon

DK880_RS02260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02260
old locus tag: DK880_00458
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQNLSLKSILSLLFLSTAMLACNSSKASCNHSKTFSIVGAAELTGATRTAEGAELEILYNSRPLQNTLLFLIKR
SIO_010081: DK880_RS02260
subclass of: SO_0000673
so part of: DK880_RS02260
location: 574630..574854
location: region:574630-574854:1
so has part: feature:574630-574854:1:exon

WP_162534122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:574630-574854:1:exon

DK880_RS02265
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02265
pseudo: true
so part of: sequence
location: complement(574930..>575404)
location: region:574930-575404:-1
so has part: feature:574930-575404:-1:exon
subclass of: SO_0000010

position:574930:-1
position: 574930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575404:-1
position: 575404
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:574930-575404:-1:exon

DK880_RS02265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934197.1
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: integrase core domain-containing protein
SIO_010081: DK880_RS02265
subclass of: SO_0000673
so part of: DK880_RS02265
location: complement(574930..>575404)
location: region:574930-575404:-1
so has part: feature:574930-575404:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:574930-575404:-1:exon

DK880_RS02270
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02270
old locus tag: DK880_00460
so part of: sequence
location: complement(575548..577458)
location: region:575548-577458:-1
so has part: feature:575548-577458:-1:exon
subclass of: SO_0000010

position:575548:-1
position: 575548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577458:-1
position: 577458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:575548-577458:-1:exon

DK880_RS02270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02270
old locus tag: DK880_00460
inference: COORDINATES: protein motif:HMM:NF024724.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MIKKLIVRIGNESKVAWMALYTLLSTLLVFSIIGVQGYLIYLAVLQLAGASFLLLCYVFLSEDKIPNRLMVSFYCLSVLFSFMGTFWYWSNTVDAKHVLFLLLIPSLIILLLLPLALRRGYVFLMFVCYITTTSKLVQLWPLCQGVLYAQLGLGIFAFIVILQCESAVSARKNFHLKKQCKVKDRKDPCDHLVDAEQSNKATLIAHKGGLSDYDREYLEFEEEFLKRIAQSDVYTFEEPAEITIDELMVSVETALKKEKLRRVPRLLVIKQDAHVPDKIFCKVKTIVRLLVTAVLRMIDLDFCKRQCVHIKLSSTQLQYNFNNFMEDGSLSNIRFPAVAIAINNITVHPAALPELQTCYQDGLGDYFYSDNGIVPMYWNRSMEIIRDAAYTHYGYVEVPNCCTLLVVLPCNSANSIEDKMIAQLPLKFKESVTVKEEKASVRILESFYWYASRIIRLNAAEVGGILLLLRRCYGFQRHASGKLLYVRAVGIAETVASWVFYSYAPVYAALLYDLARYSSLPLSYLKANYDPSVFYLIEMLLRIDKQIQLRDLPSVINDCRSFGLRELILSIIYIKLAERVYDLNHAIGYTSLETVKHMVQETLSTYVELAERLQSPEIKNLLTYVAKKALENGRKK
SIO_010081: DK880_RS02270
subclass of: SO_0000673
so part of: DK880_RS02270
location: complement(575548..577458)
location: region:575548-577458:-1
so has part: feature:575548-577458:-1:exon

WP_162534123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:575548-577458:-1:exon

DK880_RS02275
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02275
old locus tag: DK880_00461
so part of: sequence
location: complement(577551..577622)
location: region:577551-577622:-1
so has part: feature:577551-577622:-1:exon
subclass of: SO_0000663

position:577551:-1
position: 577551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577622:-1
position: 577622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577551-577622:-1:exon

DK880_RS02275
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 247481
locus tag: DK880_RS02275
old locus tag: DK880_00461
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(577587..577589),aa:Arg,seq:cct)
SIO_010081: DK880_RS02275
subclass of: SO_0000673
so part of: DK880_RS02275
location: complement(577551..577622)
location: region:577551-577622:-1
so has part: feature:577551-577622:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:577551-577622:-1:exon

DK880_RS02280
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: ruvC
locus tag: DK880_RS02280
old locus tag: DK880_00462
so part of: sequence
location: 577930..578484
location: region:577930-578484:1
so has part: feature:577930-578484:1:exon
subclass of: SO_0000010

position:577930:1
position: 577930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578484:1
position: 578484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577930-578484:1:exon

DK880_RS02280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: ruvC
locus tag: DK880_RS02280
old locus tag: DK880_00462
EC number: 3.1.21.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934243.1
GO function: GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: crossover junction endodeoxyribonuclease RuvC
translation: MQTRIILGVDPGSVRTGFGLIQVLPTVPPKLITYGAWQLKQYATFTLRMQHIYRHMVALLQEYTPDEMAIESVFQGKNVQSMLKLGRAQGVAIAAAIAYTIPLIEYAPCKVKQAITGQGNASKAQVAAMVGRLLEVSLQPIFLDASDALAIALCHGQQRPTPTAPPKQWAQFVAKHPHRVVSRL
SIO_010081: DK880_RS02280
subclass of: SO_0000673
so part of: DK880_RS02280
location: 577930..578484
location: region:577930-578484:1
so has part: feature:577930-578484:1:exon

WP_109997210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:577930-578484:1:exon

DK880_RS02285
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: ftsA
locus tag: DK880_RS02285
old locus tag: DK880_00463
so part of: sequence
location: 578676..579980
location: region:578676-579980:1
so has part: feature:578676-579980:1:exon
subclass of: SO_0000010

position:578676:1
position: 578676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579980:1
position: 579980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578676-579980:1:exon

DK880_RS02285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: ftsA
locus tag: DK880_RS02285
old locus tag: DK880_00463
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934310.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein FtsA
translation: MSKIIASLDIGSSKICVVIGRQSQYDGNKLEVLGKGEATSDGVSRGVIVNIDKTALSIKQALQAAEEDSGINVNVVHVNISGRHVTSTAHYGSITRDSIEQEITVTDIHTLTHDIHRMVMPLGMEIIHTIPQEYTIDYEIATQDPVGMTGVKLEANFHVITAKTHVIQSIHKCIKKAGIAAEFTMASALATSLAVLSDEEKEAGVCLIDIGASIINIVLFFDSIVRYTATIPLGGNHITADVQQSFMILERQAELLKTKFGNITAEAFDTQAIVTIPGLRNRSPKEVLTTNLAKVIQARMEEIATFIQEEILRSGFYEKLIAGMVITGGGSNLKGAQGLFKAITGLDVRLGVADEYLEEGSGKKLKDPMYATAIGLALAGFKTLDYREAYYKTKESTYWDHSRQNKKQTKKGSFSFKQIINKTKAFLADDYEET
SIO_010081: DK880_RS02285
subclass of: SO_0000673
so part of: DK880_RS02285
location: 578676..579980
location: region:578676-579980:1
so has part: feature:578676-579980:1:exon

WP_109997211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:578676-579980:1:exon

DK880_RS02290
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: ftsZ
locus tag: DK880_RS02290
old locus tag: DK880_00464
so part of: sequence
location: 580050..581495
location: region:580050-581495:1
so has part: feature:580050-581495:1:exon
subclass of: SO_0000010

position:580050:1
position: 580050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:581495:1
position: 581495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580050-581495:1:exon

DK880_RS02290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: ftsZ
locus tag: DK880_RS02290
old locus tag: DK880_00464
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934309.1
GO function: GO:0003924 - GTPase activity [Evidence IEA]
GO process: GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein FtsZ
translation: MKDLSYTFDLPFHHKSIIRVIGVGGGGSNAVNNMYKRGIKDVSFIVCNTDVQALRNSPIQHKLQIGAALTSGLGAGANPEVGRNAALESKENIRELLSEDTKMLFITAGMGGGTGTGAAPVIAGIAQKQGILTVGIVTLPFSFEGKKKYLQAQEGISEMRKYCDTVLIILNDKIQTTLGGLSITQAFLEADKVLTTAAKSIAEIITVPGYVNVDFEDVKTVMKNAGAAVMGSGEAEGEDRALQAAEAALASPLLDYTDIRGAKKILLSIVSGQAAELQMDELTVITNYIQAQTGDDAEVIFGHGADPEMAEKLKVTVIATGFKRSQTTAPAVGATGTQQTLPPDPILQETLTQPEGIYSSPTQTIGIQEEATPRAPKKKEKEGRITEESAVQLPLPFTYPPANAYPPNWNHALTRKPLNKQRTTAQNWEDHYVKEQLEIPAYLRKHIKLDLLNLDSSVAKEEMRYWLNDPLDKPVAKEEEE
SIO_010081: DK880_RS02290
subclass of: SO_0000673
so part of: DK880_RS02290
location: 580050..581495
location: region:580050-581495:1
so has part: feature:580050-581495:1:exon

WP_109997212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:580050-581495:1:exon

DK880_RS02295
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02295
old locus tag: DK880_00465
so part of: sequence
location: 581553..582029
location: region:581553-582029:1
so has part: feature:581553-582029:1:exon
subclass of: SO_0000010

position:581553:1
position: 581553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:582029:1
position: 582029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581553-582029:1:exon

DK880_RS02295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02295
old locus tag: DK880_00465
EC number: 2.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934446.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HIT family protein
translation: MKQVTHASTTDCIFCKMVAGLATCHTVWESYQHLAFLSIFPNTEGFTVVIPKHHLSSYIFDHTSDEINGLMEAARKVSQLLIHKFPTVARTAVVFEGYGVNHLHAKLIPLHGTKREHWVKTSASIQTKFDQYPGYISSHDAERESDEKLAALASLLRS
SIO_010081: DK880_RS02295
subclass of: SO_0000673
so part of: DK880_RS02295
location: 581553..582029
location: region:581553-582029:1
so has part: feature:581553-582029:1:exon

WP_109997213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:581553-582029:1:exon

DK880_RS02300
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02300
old locus tag: DK880_00466
so part of: sequence
location: complement(582092..583501)
location: region:582092-583501:-1
so has part: feature:582092-583501:-1:exon
subclass of: SO_0000010

position:582092:-1
position: 582092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583501:-1
position: 583501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582092-583501:-1:exon

DK880_RS02300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02300
old locus tag: DK880_00466
inference: COORDINATES: protein motif:HMM:NF019850.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cyanophycin synthetase
translation: MLSFPAYCFIYFLGIGGIGMSALARLLAAQGYTIVGYDKAASPLVTQLQNAGMFIHFTDSVTAIPSVIRQHPTKTLIIYTPAIPSDSPILNYLRGSGYTMLSRAEALGSIVNHLPTVAIAGTHGKTTASAILAHMLYESTLAMLAFVGGIMHRYNSNIIYNHTLNQVQVVITEADEFNKSFLQLTPSHSIVTSIDPDHLDTYATVATLQENFKQFIKQSKQTVLVHAKAANQLQLTTHGYSPLLTYGLNNAVIQADNIRIAARQSVFDYIGDGVTIKEIILPLPGSYNIENALAAITMGLTLGLTEAHVRASIASFPGMQRRFDYIARNEKFVLIDDYAHHPAEIAALLSTVRHIYPNGCITAIFQPHLFSRTADFYEAFGTTLSIADQVLLLPIYPAREVAVPAISSQLIYDCLSCKTKILVEDGKLLTILPSYMRQHAYHVVVTIGAGDIGTMVPAIAAVLAQQLLQ
SIO_010081: DK880_RS02300
subclass of: SO_0000673
so part of: DK880_RS02300
location: complement(582092..583501)
location: region:582092-583501:-1
so has part: feature:582092-583501:-1:exon

WP_109997214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:582092-583501:-1:exon

DK880_RS02310
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rnhB
locus tag: DK880_RS02310
old locus tag: DK880_00468
so part of: sequence
location: 584017..584640
location: region:584017-584640:1
so has part: feature:584017-584640:1:exon
subclass of: SO_0000010

position:584017:1
position: 584017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584640:1
position: 584640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584017-584640:1:exon

DK880_RS02310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rnhB
locus tag: DK880_RS02310
old locus tag: DK880_00468
EC number: 3.1.26.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012472980.1
GO function: GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease HII
translation: MHRPLILAGIDEAGRGPLAGPVIAAVVILNPQKPIENLADSKQLNAKQRAFLACQIKEQAMDWAIGRATVSEIDQCNILQATLLAMQRALSDLCIAPDSVLVDGLHCPASPYPIQAIVRGDQHVAAISAASILAKTHRDTEMLTWDSCYPGYGFAQHKGYGTAKHLQAIRELGITPIHRRSFSFQGNPFLPGQRKISPNTEPTLKTK
SIO_010081: DK880_RS02310
subclass of: SO_0000673
so part of: DK880_RS02310
location: 584017..584640
location: region:584017-584640:1
so has part: feature:584017-584640:1:exon

WP_109997216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:584017-584640:1:exon

DK880_RS02315
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02315
old locus tag: DK880_00469
so part of: sequence
location: complement(584668..586218)
location: region:584668-586218:-1
so has part: feature:584668-586218:-1:exon
subclass of: SO_0000010

position:584668:-1
position: 584668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586218:-1
position: 586218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584668-586218:-1:exon

DK880_RS02315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02315
old locus tag: DK880_00469
inference: COORDINATES: protein motif:HMM:NF015684.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LptF/LptG family permease
translation: MRFFSIKKIDKLLLRNFVITFILLLKLVFFILIIHTFFLLFQDIAGKGLGVSIYAKLLWYIGLNVMPDAFPVAVLVSSLIVFGHFAESYELTAMRAAGLSLQRTLRLPFIFILMVSGVLFYFQDYIHPTIKPKIFALVEDIINKKTALLIQPGVICNDIPGYSIYVDKKEKGKEQMQGIVMYDYSKKQGRVVLTTAEAGRLYTTSDEGYLVMELTNGHNYVEPLPSRKEPTLNNKPLHPFYTNNFAYQKIRISLEALKMGNTKEKYEWDPRTRMHAQLKQLTQEWSQQIEKMEQKARLLIQEQCTHYQFTTQPDPLTFPSHSEEIKTARDAFMVFRNQLIERKDALDKAEAAQADDPIARGVIENALYAVERIKTKLEHEKQLLDDLRKGWRECLYEKNHRLAMVIRCIIMFLLAAPLGCIIRRGGFGISVLISCFFMLVQYIFTICGRDLVMDGKCIPFVGAWLANFILAPFCLFFLLQAQHGMGLLSVDKFVASIQSIRRYIRLGYCCNKKKNS
SIO_010081: DK880_RS02315
subclass of: SO_0000673
so part of: DK880_RS02315
location: complement(584668..586218)
location: region:584668-586218:-1
so has part: feature:584668-586218:-1:exon

WP_109997217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:584668-586218:-1:exon

DK880_RS02320
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02320
old locus tag: DK880_00470
so part of: sequence
location: 586323..586397
location: region:586323-586397:1
so has part: feature:586323-586397:1:exon
subclass of: SO_0000663

position:586323:1
position: 586323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586397:1
position: 586397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:586323-586397:1:exon

DK880_RS02320
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 247481
locus tag: DK880_RS02320
old locus tag: DK880_00470
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:586358..586360,aa:Met,seq:cat)
SIO_010081: DK880_RS02320
subclass of: SO_0000673
so part of: DK880_RS02320
location: 586323..586397
location: region:586323-586397:1
so has part: feature:586323-586397:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:586323-586397:1:exon

DK880_RS02325
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: trmD
locus tag: DK880_RS02325
old locus tag: DK880_00471
so part of: sequence
location: 586459..587151
location: region:586459-587151:1
so has part: feature:586459-587151:1:exon
subclass of: SO_0000010

position:586459:1
position: 586459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587151:1
position: 587151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:586459-587151:1:exon

DK880_RS02325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: trmD
locus tag: DK880_RS02325
old locus tag: DK880_00471
EC number: 2.1.1.228
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012925987.1
GO function: GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (guanosine(37)-N1)-methyltransferase TrmD
translation: MRIDIITCSPELLESPLRHFTFQRALTQKLLTLHIHNLRDYTAYKHGKIDDKPYGGAAGMVLMIEPIAHCMRSLQKERTYDEIIYMAPDGELLTQETIHSYSLKQNIILLCGHYKGIDERVRTHFITREISVGDYVLSGGELPALLLVDAIVRVIPAVLSDASSALTDSFQNGLIAPPVYTRPYNYEGIKVPEVLLSGNHQAIQKWSQQEAINRTQQRRPALIDPIMQQD
SIO_010081: DK880_RS02325
subclass of: SO_0000673
so part of: DK880_RS02325
location: 586459..587151
location: region:586459-587151:1
so has part: feature:586459-587151:1:exon

WP_109997218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:586459-587151:1:exon

DK880_RS02335
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02335
old locus tag: DK880_00472
so part of: sequence
location: 587440..587889
location: region:587440-587889:1
so has part: feature:587440-587889:1:exon
subclass of: SO_0000010

position:587440:1
position: 587440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587889:1
position: 587889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587440-587889:1:exon

DK880_RS02335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02335
old locus tag: DK880_00472
inference: COORDINATES: protein motif:HMM:NF014950.2
GO function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MKQHKGKIVEKAIKKSGYQMKALAEKLKIARNTLYGKLKEIELEDALIMRIGGIIHYDFTIDFPHLCDNRDTRVEEEAPSYTSMDYKHPSFIQLQELNRKYLQLLEGYNKLLKILIMLANNNELTGIKKEIEAFLTKEEKEDPLKEDLL
SIO_010081: DK880_RS02335
subclass of: SO_0000673
so part of: DK880_RS02335
location: 587440..587889
location: region:587440-587889:1
so has part: feature:587440-587889:1:exon

WP_109997220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:587440-587889:1:exon

DK880_RS02340
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: murB
locus tag: DK880_RS02340
old locus tag: DK880_00473
so part of: sequence
location: complement(587916..588953)
location: region:587916-588953:-1
so has part: feature:587916-588953:-1:exon
subclass of: SO_0000010

position:587916:-1
position: 587916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588953:-1
position: 588953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587916-588953:-1:exon

DK880_RS02340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: murB
locus tag: DK880_RS02340
old locus tag: DK880_00473
EC number: 1.3.1.98
inference: COORDINATES: protein motif:HMM:NF000755.0
GO function: GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramate dehydrogenase
translation: MQLFNHYSLKLLNTFQIPSVAMHYVPCYTVQEIETFCTTIKIAKTGLHILGGGSNTLFVGDYPGYVLHVRLTGIEVIKETSHTILVKAAAGVSWHELVLYCVTRNYGGIENLSFIPGTVGGAIVQNIGAYGVELKEVIDRVEAIELATGKKRIFQSSACAFGYRTSIFNTIARHAYVITAAVLALHKEAKFRITYGAIQDSLAQRGIQQLSFQAISDTIIAIRKQKLPDPAVLGNAGSFFKNPVLPIAHYQSLKRKYPELVAYDTQQEGCIKISAASLITLAGFKGIRKRQVGVYPLHALILVNYGGATGKEIVKLATQIKQKVEKLFHVRLLPEVQIVGEKTML
SIO_010081: DK880_RS02340
subclass of: SO_0000673
so part of: DK880_RS02340
location: complement(587916..588953)
location: region:587916-588953:-1
so has part: feature:587916-588953:-1:exon

WP_162534124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:587916-588953:-1:exon

DK880_RS02345
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rpmB
locus tag: DK880_RS02345
old locus tag: DK880_00474
so part of: sequence
location: 589101..589358
location: region:589101-589358:1
so has part: feature:589101-589358:1:exon
subclass of: SO_0000010

position:589101:1
position: 589101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589358:1
position: 589358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:589101-589358:1:exon

DK880_RS02345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rpmB
locus tag: DK880_RS02345
old locus tag: DK880_00474
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934564.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L28
translation: MARICDITGKRAIIGNNVSHANNKTKRWFYPNLQKKNFYLPEEKVWIPMKVCTSVLRTINKKGICAVLKEAKQKGTLSKKFCRLV
SIO_010081: DK880_RS02345
subclass of: SO_0000673
so part of: DK880_RS02345
location: 589101..589358
location: region:589101-589358:1
so has part: feature:589101-589358:1:exon

WP_109997222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:589101-589358:1:exon

DK880_RS02350
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rpmG
locus tag: DK880_RS02350
old locus tag: DK880_00475
so part of: sequence
location: 589385..589570
location: region:589385-589570:1
so has part: feature:589385-589570:1:exon
subclass of: SO_0000010

position:589385:1
position: 589385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589570:1
position: 589570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:589385-589570:1:exon

DK880_RS02350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rpmG
locus tag: DK880_RS02350
old locus tag: DK880_00475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013616632.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L33
translation: MAKKKGSRVQVILECTEQRKSGVAGMSRYCTEKNRTKTIARLELRKYNPILKRYTLHKEIK
SIO_010081: DK880_RS02350
subclass of: SO_0000673
so part of: DK880_RS02350
location: 589385..589570
location: region:589385-589570:1
so has part: feature:589385-589570:1:exon

WP_109997223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:589385-589570:1:exon

DK880_RS02355
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02355
old locus tag: DK880_00476
so part of: sequence
location: 589583..589744
location: region:589583-589744:1
so has part: feature:589583-589744:1:exon
subclass of: SO_0000010

position:589583:1
position: 589583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589744:1
position: 589744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:589583-589744:1:exon

DK880_RS02355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02355
old locus tag: DK880_00476
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009579192.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4295 family protein
translation: MAKKVMATLSKGNQGRLTKLIQVKRSSKTGAYGFRSRMVSPEMVKEVLARKTE
SIO_010081: DK880_RS02355
subclass of: SO_0000673
so part of: DK880_RS02355
location: 589583..589744
location: region:589583-589744:1
so has part: feature:589583-589744:1:exon

WP_109997224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:589583-589744:1:exon

DK880_RS02360
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: ftsY
locus tag: DK880_RS02360
old locus tag: DK880_00477
so part of: sequence
location: 589889..590863
location: region:589889-590863:1
so has part: feature:589889-590863:1:exon
subclass of: SO_0000010

position:589889:1
position: 589889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:590863:1
position: 590863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:589889-590863:1:exon

DK880_RS02360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: ftsY
locus tag: DK880_RS02360
old locus tag: DK880_00477
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934568.1
GO function: GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal recognition particle-docking protein FtsY
translation: MGILNFFSSKVAKSKESLTKALSKTRHTLWDQFTKVIAGKSTIDGDILDKLEELLIGADVGVPTTLKIITAIEQRIARDKYLTTAELFQILKSEIEKLLLPSNPNPAERTAADAVIPTPFVLLVVGVNGVGKTTTIGKLAAQFAKEGKKVILGAADTFRAAAIEQLTIWGNRTGATVVAKGMQVDPSSVAYEAVQQGIQSNTDLVIIDTAGRLHTKKHLVNELAKIKRTIHKCLPGAPHEVLLVLDGTTGQNAFHQAEIFTAAVQVTGLVITKLDGTAKGGMLLGIANQFTLPIQYIGVGEQVEDLKPFDPHAFVEALFEQWNA
SIO_010081: DK880_RS02360
subclass of: SO_0000673
so part of: DK880_RS02360
location: 589889..590863
location: region:589889-590863:1
so has part: feature:589889-590863:1:exon

WP_109997225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:589889-590863:1:exon

DK880_RS02365
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: nth
locus tag: DK880_RS02365
old locus tag: DK880_00479
so part of: sequence
location: complement(591340..591975)
location: region:591340-591975:-1
so has part: feature:591340-591975:-1:exon
subclass of: SO_0000010

position:591340:-1
position: 591340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591975:-1
position: 591975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:591340-591975:-1:exon

DK880_RS02365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: nth
locus tag: DK880_RS02365
old locus tag: DK880_00479
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934595.1
GO function: GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endonuclease III
translation: MTKAVVNQIFQILSKANPNPTTELVYTTDFTLLVAVILSAQATDVSVNKATQELFVQYNTPSKILALGEENLKKCIKTIGLYNSKARHIIALCKELIERHHGHIPNTFEMLIRLPGIGRKTANVLLNVLFQKPVIAVDTHVFRVAKRIGLAQGNSVAKVEKELEQIITPPWLMHAHHWLILHGRYICKARNPNCNICPIKAYCAYIKSASG
SIO_010081: DK880_RS02365
subclass of: SO_0000673
so part of: DK880_RS02365
location: complement(591340..591975)
location: region:591340-591975:-1
so has part: feature:591340-591975:-1:exon

WP_109997226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:591340-591975:-1:exon

DK880_RS02370
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02370
old locus tag: DK880_00480
so part of: sequence
location: 592117..592776
location: region:592117-592776:1
so has part: feature:592117-592776:1:exon
subclass of: SO_0000010

position:592117:1
position: 592117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592776:1
position: 592776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:592117-592776:1:exon

DK880_RS02370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02370
old locus tag: DK880_00480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934594.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydrolase
translation: MHALTYPEVYSKTLPAKKLVVLLHGIGADGNDWIPLAHYMQNNLTDCHFIAPHGIEPYESAPYGRQWFSLLNRDPAVMQPLLARNAPRLMDSIQQKQLTLQLTNQDTVIMGFSQGAMMGIYLTLIQKTPFLATIAFSGLLIAPPACLNTTTPICLIHGVLDSIITVDAVDQAIQYLKKWHIPHNDYKLPHLAHSIDHRGLQQAIDCIHKASLGFTIAPK
SIO_010081: DK880_RS02370
subclass of: SO_0000673
so part of: DK880_RS02370
location: 592117..592776
location: region:592117-592776:1
so has part: feature:592117-592776:1:exon

WP_109997227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:592117-592776:1:exon

DK880_RS02375
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02375
old locus tag: DK880_00481
so part of: sequence
location: complement(592843..595455)
location: region:592843-595455:-1
so has part: feature:592843-595455:-1:exon
subclass of: SO_0000010

position:592843:-1
position: 592843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595455:-1
position: 595455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:592843-595455:-1:exon

DK880_RS02375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02375
old locus tag: DK880_00481
inference: COORDINATES: protein motif:HMM:NF013283.2
GO component: GO:0019867 - outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: POTRA domain-containing protein
translation: MIRIYRKYIPYILFLFYLAGGRGLPALATTGYTITHIQVEGNVTIEEELLIGLSGLEPGVLLNPSSEEIGISIRKIAKYEGIKTVSLYLTAVDEVNKVATCVIRVEEHPKLASYVIEGISKKEKGSLCEQVKIPPHASLAPVFLRNTTTAIKKYFLDKGFGGVAVATELVPDKKTKNRVHLKIKIVKGKKSIVDKIIFEGNKHIDSNLLRYHITELNESPRFTLLKDIVKRAFSGDLFRKGTSVLQNANIYEKLKSYFFEHVSFFPSVFTEEKYLKAKKDIILFYKSNGFQDACITAAHCKQSPTGRVAIYFKIEEGNPYKIRHIKWVGNCRYSEQDLAKLLNLAQGSPYDPVRIKEQLGQNVDDLYFNNGYLCFRSEVIETGIEDQQVDLEIRIWEGKQATINQLHIVGNTITHDEVIRRSLYTIPGEKFNRQHVGESMRRLNMLQFFYPLSTPLVNPSETGDTVDITYVVKEKLNLNLSGGLSSADGLIGHVELGSNNVSIRNLFSGKIPLGAAQKLSFKGEFGKHKQKGLSLTFEDPWLWWGKRRYSFSFGISNRYQYFPYKKTPLDRYIDFALFPIGKQHKNGEMHTFSCWTSLGRQLAKDWSWELGVHYVRYAYQHCVWLKDGKRKSGISHDIQLNTSLSYDSTDNRYYPTRGLSWDNKLTITPPYTLLSGKAFDPSAMPRFQEFGKYMMDLSYFKKLPKSFVFHTSGHMGFLFSLSKGAIGPFHRFRMGGISPDEGGGLLNHDFVSLRGYPNDSLTPEHCHKQLSGGVLFQKVSVELRYPLALNLACVYLLGFMDVGDSWLTYEKYEKYNYQAMKKSIGLGLRVFPPIPIIPMIGIDIGYRLDATKKKPARAWEWHFHINPLSR
SIO_010081: DK880_RS02375
subclass of: SO_0000673
so part of: DK880_RS02375
location: complement(592843..595455)
location: region:592843-595455:-1
so has part: feature:592843-595455:-1:exon

WP_162534125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:592843-595455:-1:exon

DK880_RS02380
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: queA
locus tag: DK880_RS02380
old locus tag: DK880_00482
so part of: sequence
location: complement(595778..596824)
location: region:595778-596824:-1
so has part: feature:595778-596824:-1:exon
subclass of: SO_0000010

position:595778:-1
position: 595778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596824:-1
position: 596824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595778-596824:-1:exon

DK880_RS02380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: queA
locus tag: DK880_RS02380
old locus tag: DK880_00482
EC number: 2.4.99.17
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010610099.1
GO function: GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
translation: MKLSNFKFELPKDLIAQYPIESKEAARLMVVHKNSGQIEHKTIKELASYFEKGDTLVANDSKVLPCKLYGYKEKTNAEVEVILLRKLSHEHALWDTIVEPARKIRIGNKIYFGNGELVAEIIDNTTSRGRTLKLLFEGGESDFYALIEQIGHVPLPPQIGRSSTPEDSLYYKTLFAKNIGSIVLPAAGLHFTPYLLKYLELCNISVTCVTLHIGLGELKTIDMEDLTKVKAASERFIITEEAAHVVNQSLAKQKKVCAVGTSVLKAIESSVSVSCHLKANNGWTNKFILPSYPFKICNALLTTFHLPFSSSLVNIAAFGGDELVLAAYAEAIKEKYRFFLYGDAMLII
SIO_010081: DK880_RS02380
subclass of: SO_0000673
so part of: DK880_RS02380
location: complement(595778..596824)
location: region:595778-596824:-1
so has part: feature:595778-596824:-1:exon

WP_109997229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:595778-596824:-1:exon

DK880_RS02385
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02385
old locus tag: DK880_00483
so part of: sequence
location: complement(596872..597516)
location: region:596872-597516:-1
so has part: feature:596872-597516:-1:exon
subclass of: SO_0000010

position:596872:-1
position: 596872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597516:-1
position: 597516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596872-597516:-1:exon

DK880_RS02385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02385
old locus tag: DK880_00483
inference: COORDINATES: protein motif:HMM:NF024957.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane beta-barrel protein
translation: MISIKKYVIAVLVLHGLNGPETAHALAGRFSIELSPALSINKIYNFNSNKIALKDRGIAPGLISGLAYHFPLRAHCSVSAGVSYALGHMGVITLRSASEAYETYLLQSIWLPILCRLYTSEIKLDTSMYFKLGFIPSIGLPSRPISSKVKGTKLVSTRQFNGWMHLGGGVKYDFSLTNSLMVGISYYGDVSGIMHTEEAYGHNHFFCLDICLLF
SIO_010081: DK880_RS02385
subclass of: SO_0000673
so part of: DK880_RS02385
location: complement(596872..597516)
location: region:596872-597516:-1
so has part: feature:596872-597516:-1:exon

WP_109997230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:596872-597516:-1:exon

DK880_RS05590
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05590
so part of: sequence
location: complement(597513..597638)
location: region:597513-597638:-1
so has part: feature:597513-597638:-1:exon
subclass of: SO_0000010

position:597513:-1
position: 597513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597638:-1
position: 597638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597513-597638:-1:exon

DK880_RS05590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05590
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIGRKKLVSGGDVRAVEVVIRKEKLMGYNACLKQLFLHTFL
SIO_010081: DK880_RS05590
subclass of: SO_0000673
so part of: DK880_RS05590
location: complement(597513..597638)
location: region:597513-597638:-1
so has part: feature:597513-597638:-1:exon

WP_262494588.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:597513-597638:-1:exon

DK880_RS02390
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02390
old locus tag: DK880_00484
so part of: sequence
location: 597876..598244
location: region:597876-598244:1
so has part: feature:597876-598244:1:exon
subclass of: SO_0000010

position:597876:1
position: 597876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598244:1
position: 598244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597876-598244:1:exon

DK880_RS02390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02390
old locus tag: DK880_00484
inference: COORDINATES: protein motif:HMM:NF009150.0
GO function: GO:0004518 - nuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YraN family protein
translation: MSIKDSTADFGQYAEYIAANYLKQKGFSILAKNFRYKRYEIDLIAQKGELLVFVEVKARKNNLFGYPENFIKRKQISGIRLAAAHYLRKQPYQVQMIRFDIIAILGNFNQITEIMHLEDGFY
SIO_010081: DK880_RS02390
subclass of: SO_0000673
so part of: DK880_RS02390
location: 597876..598244
location: region:597876-598244:1
so has part: feature:597876-598244:1:exon

WP_162534126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:597876-598244:1:exon

DK880_RS02395
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02395
old locus tag: DK880_00485
so part of: sequence
location: complement(598466..599029)
location: region:598466-599029:-1
so has part: feature:598466-599029:-1:exon
subclass of: SO_0000010

position:598466:-1
position: 598466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599029:-1
position: 599029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598466-599029:-1:exon

DK880_RS02395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02395
old locus tag: DK880_00485
EC number: 3.1.1.-
inference: COORDINATES: protein motif:HMM:NF013890.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipase family protein
translation: MSPGRIFVLDGTNGKEIVIAYRGTQDRYDWRTNLQAAWQADVDFLSEQDGARTKAPWGYYQAFKDSRASLMNCLRQHVQHYGVSMKDLRVTVTGHSMGGAFAVISVLYLKTEAGIRDVAVVNFGSPKILNTTGSAMCERLIDKHNIIRAVSSDPVPYVISDYDLFYKHVGALQHINNGFSPMHKVNA
SIO_010081: DK880_RS02395
subclass of: SO_0000673
so part of: DK880_RS02395
location: complement(598466..599029)
location: region:598466-599029:-1
so has part: feature:598466-599029:-1:exon

WP_109997232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:598466-599029:-1:exon

DK880_RS02400
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02400
old locus tag: DK880_00486
so part of: sequence
location: complement(599248..599913)
location: region:599248-599913:-1
so has part: feature:599248-599913:-1:exon
subclass of: SO_0000010

position:599248:-1
position: 599248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599913:-1
position: 599913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:599248-599913:-1:exon

DK880_RS02400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02400
old locus tag: DK880_00486
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: F-box domain-containing protein
translation: MQNIVYVVYALGRVCMVSMLIAACSNLNMGVNGQAVAFLQLPSEVREEIYAFLPKEDLLSIRQIYKNEKNLIEKRLFSNSFSSKYPLHIIDLTEEKLCFAERYKILHIRYSGPLDKDCLTSLARLKLQSLQLSYDSRDSMNTDKSPFVERQDTITDTFFPIQSLTSLELEYKEEKMVYIFKYVRESEYSPAEISKFKNSYSIRQRSCRSNCIACCKQGLRP
SIO_010081: DK880_RS02400
subclass of: SO_0000673
so part of: DK880_RS02400
location: complement(599248..599913)
location: region:599248-599913:-1
so has part: feature:599248-599913:-1:exon

WP_109997233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:599248-599913:-1:exon

DK880_RS02405
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02405
old locus tag: DK880_00487
so part of: sequence
location: complement(600635..601207)
location: region:600635-601207:-1
so has part: feature:600635-601207:-1:exon
subclass of: SO_0000010

position:600635:-1
position: 600635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601207:-1
position: 601207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:600635-601207:-1:exon

DK880_RS02405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02405
old locus tag: DK880_00487
inference: COORDINATES: protein motif:HMM:NF014669.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: biotin transporter BioY
translation: MSIATCNKIIRSSLKYIRCASNFHRITAILSAIALLAVCTQISVPLKPVPVTMQSFAVLFIGIFYSKCHAYSAVIVYLLIGMMGIPVFANFGSGISYIMGPTGGFLIGFLVALYPMSWYKTYLSDIITVHSVLLLCLLGSLAIFGCGYLWLIQYINAYKAFHLGIKPFIVGEIAKWVFLMVIARIKKISI
SIO_010081: DK880_RS02405
subclass of: SO_0000673
so part of: DK880_RS02405
location: complement(600635..601207)
location: region:600635-601207:-1
so has part: feature:600635-601207:-1:exon

WP_109997234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:600635-601207:-1:exon

DK880_RS02410
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: lepA
locus tag: DK880_RS02410
old locus tag: DK880_00488
so part of: sequence
location: complement(601505..603301)
location: region:601505-603301:-1
so has part: feature:601505-603301:-1:exon
subclass of: SO_0000010

position:601505:-1
position: 601505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603301:-1
position: 603301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:601505-603301:-1:exon

DK880_RS02410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: lepA
locus tag: DK880_RS02410
old locus tag: DK880_00488
EC number: 3.6.5.n1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019944468.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation elongation factor 4
translation: MKNIRNFCIIAHIDHGKSTLADRLLEWTGTIDPRDQKDQILDNMDLERERGITIKSHAIQMVYLYEEQNYLLNLIDTPGHVDFTYEVSRSIAACEGALLVVDASQGIEAQTISNLYLALAQDLTIIPVLNKIDLPGAMPEEVKDQIVELIGCAHDSIISVSAKQGIGIDALLQAVVTRIPSPQGNNQTPLQAMIFDSVYNTFRGVEVYLRIFNGMIKPGDLVKCISTDHTYKVEEVGILKLQQLPRPLLQAGDVGYMIAGIKNASEVKVGDTITHMDKTGQPLAAMLQGFVAVKPMVFAGIYPVDTSEYEALRDAMEKLKLNDAALVWEPETSIALGFGFRCGFLGMLHMEIIQERLEQEFNITIITTVPSVQFHVIDKKGQLLLVQSPADMPDPNDIGHIEEPVMRTQIITKSTFVGGIIKLCMDRRGVFNNQVYLTADRVELTFELPLVEIVFDFFDKLKTISRGYASLDYELCKFAAADLVKLDILLHNEKVDALSAIVHKSNAYERGKTLCRKLKDIIPRHMFEVSIQAAIGTKIMARETVKALRKNVIAKCYGGDISRKRKLLEKQKKGKKRMRQVGAVEIPQEAFMAVLSLD
SIO_010081: DK880_RS02410
subclass of: SO_0000673
so part of: DK880_RS02410
location: complement(601505..603301)
location: region:601505-603301:-1
so has part: feature:601505-603301:-1:exon

WP_109997235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:601505-603301:-1:exon

DK880_RS02415
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rplS
locus tag: DK880_RS02415
old locus tag: DK880_00490
so part of: sequence
location: 603465..603821
location: region:603465-603821:1
so has part: feature:603465-603821:1:exon
subclass of: SO_0000010

position:603465:1
position: 603465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603821:1
position: 603821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603465-603821:1:exon

DK880_RS02415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rplS
locus tag: DK880_RS02415
old locus tag: DK880_00490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934597.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L19
translation: MHNLIRYVESVCCPQPAQSFPSFKAGDTLNVHVKIQEGNKVRIQQFQGVVIQRRNPNTSGETFTLRKVSKEIGVERIFPLNSPTIEKIELKRRGRVRRARIYYLRNKQGKAARIKELR
SIO_010081: DK880_RS02415
subclass of: SO_0000673
so part of: DK880_RS02415
location: 603465..603821
location: region:603465-603821:1
so has part: feature:603465-603821:1:exon

WP_109997236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:603465-603821:1:exon

DK880_RS02420
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02420
old locus tag: DK880_00491
so part of: sequence
location: 603943..604015
location: region:603943-604015:1
so has part: feature:603943-604015:1:exon
subclass of: SO_0000663

position:603943:1
position: 603943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604015:1
position: 604015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603943-604015:1:exon

DK880_RS02420
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 247481
locus tag: DK880_RS02420
old locus tag: DK880_00491
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:603976..603978,aa:Thr,seq:tgt)
SIO_010081: DK880_RS02420
subclass of: SO_0000673
so part of: DK880_RS02420
location: 603943..604015
location: region:603943-604015:1
so has part: feature:603943-604015:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:603943-604015:1:exon

DK880_RS02425
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02425
so part of: sequence
location: complement(603981..604874)
location: region:603981-604874:-1
so has part: feature:603981-604874:-1:exon
subclass of: SO_0000010

position:603981:-1
position: 603981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604874:-1
position: 604874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603981-604874:-1:exon

DK880_RS02425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934551.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zinc dependent phospholipase C family protein
translation: MKKLCGLGILFLIAVSPTWAWGFFAHKQINRYAITTLPPAMFSFYKAHLVYLTEKAVNPDKRRYTIQEEASNHFIDLEYYVWAAKQKITFKQAVAQYGMAALIRHGQLPWAIVKTYTKLVKAFKDKDLPNILKYSADLGHYVADAHVPLHTTEQYDGQMTHQEGIHALWETQLPLLFFDTYTLWIGQAHDIQDPLLHIWTIIGASHALVPTVLAVERQLATRYPAWLKYSFQQEGSVLKKKYSIEFATLYHQSLQGQVEARLCQSVRAVGSFWFSAWLKAGAPTLEVPPAGIEPATY
SIO_010081: DK880_RS02425
subclass of: SO_0000673
so part of: DK880_RS02425
location: complement(603981..604874)
location: region:603981-604874:-1
so has part: feature:603981-604874:-1:exon

WP_204082238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:603981-604874:-1:exon

DK880_RS02435
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rpsT
locus tag: DK880_RS02435
old locus tag: DK880_00493
so part of: sequence
location: 605280..605546
location: region:605280-605546:1
so has part: feature:605280-605546:1:exon
subclass of: SO_0000010

position:605280:1
position: 605280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605546:1
position: 605546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605280-605546:1:exon

DK880_RS02435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rpsT
locus tag: DK880_RS02435
old locus tag: DK880_00493
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934546.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S20
translation: MANHLSAKKRIRSNHAKYLRNRYQLKTCRTFMKKVKHLTDKTAALQLLPKVSSMLDKLAASNIIHKNKSAHSKAQLAKHINSLIAASS
SIO_010081: DK880_RS02435
subclass of: SO_0000673
so part of: DK880_RS02435
location: 605280..605546
location: region:605280-605546:1
so has part: feature:605280-605546:1:exon

WP_109997239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:605280-605546:1:exon

DK880_RS02440
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: radC
locus tag: DK880_RS02440
old locus tag: DK880_00494
so part of: sequence
location: 605593..606348
location: region:605593-606348:1
so has part: feature:605593-606348:1:exon
subclass of: SO_0000010

position:605593:1
position: 605593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606348:1
position: 606348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605593-606348:1:exon

DK880_RS02440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: radC
locus tag: DK880_RS02440
old locus tag: DK880_00494
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012472319.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA repair protein RadC
translation: METAWHMNISTTVSLRVQDWAMADRPREKLLQKGIASLTDAELLAVLIGSGTRHMNVILLAQHILKANGNSLHELAKRSVQELQRFKGIGEAKAITIVCAMELTRRRIPTTNHKKSIVSNSLQAYTLLQPDLTDKLAEECWILLLNRANYLIKKIKISSGGMNATIVDPKLIFKLVLEHQAASLILAHNHPSGNPMPSITDIQLTQRLLEAGKLLDVDIIDHIIFTDNTYFSLADQGMLKKFPLEKSPKRK
SIO_010081: DK880_RS02440
subclass of: SO_0000673
so part of: DK880_RS02440
location: 605593..606348
location: region:605593-606348:1
so has part: feature:605593-606348:1:exon

WP_109997703.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:605593-606348:1:exon

DK880_RS02445
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rnhA
locus tag: DK880_RS02445
old locus tag: DK880_00495
so part of: sequence
location: complement(606468..606917)
location: region:606468-606917:-1
so has part: feature:606468-606917:-1:exon
subclass of: SO_0000010

position:606468:-1
position: 606468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606917:-1
position: 606917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:606468-606917:-1:exon

DK880_RS02445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rnhA
locus tag: DK880_RS02445
old locus tag: DK880_00495
EC number: 3.1.26.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934516.1
GO function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease HI
translation: MIHIYTDGSSRGNPGPGGYGVILKYGHYTKELSQGYRRTTNNRMELLGVIIGLEALKADGQEVTIYCDSKYVLQPVEKGWLQVWLKKDFKGKKNADLWKRFWLVYQKHRVRLCWLKGHSGHQENERCDTLALASSYQNLLIDAYYENRQ
SIO_010081: DK880_RS02445
subclass of: SO_0000673
so part of: DK880_RS02445
location: complement(606468..606917)
location: region:606468-606917:-1
so has part: feature:606468-606917:-1:exon

WP_109997240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:606468-606917:-1:exon

DK880_RS02450
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02450
old locus tag: DK880_00496
so part of: sequence
location: complement(606952..608697)
location: region:606952-608697:-1
so has part: feature:606952-608697:-1:exon
subclass of: SO_0000010

position:606952:-1
position: 606952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608697:-1
position: 608697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:606952-608697:-1:exon

DK880_RS02450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02450
old locus tag: DK880_00496
inference: COORDINATES: protein motif:HMM:NF024603.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ig-like domain-containing protein
translation: MFRRLLLWCIIAWLMPLTACVEVKTPEGGPPDQTPPKLIRSFPGEGALNFKGPKLRFTFDKKIAVEHVYKNLIVMPTLDKPNNKPPYSYAVKGKTLELKLHAPLKADTTYAFHLHNVVKDRHEGTKPKPLHASVTFSTGAFIDSITAKGQVKALLTNKPVENVNVYFYNAERDPKEWQKGKKDPGYDKEKCIPDYYTETDKDGYFTLNHIRLGRYYLRAVTGSVNNYQIDCEKEKYGFLKDPIDLNNSQEAIVVPLIESDVRDLKHIRVVPQKGFCEIIFNKAITKYQLLPLQTMLVKKERPLYSLISEKSPETIIVFNTLHCLAGEPFPIKIVVEDALHTLLEEEISLYFKEGTLDKKDLFCSVAPRLLPSILPAFTESITFNKPIQTFDRTLVYFECKDQYKIPLKEEELVWNTDKSKLTIKKNFSEEEMLKCIVPTKETDNKSKIASRIVTLQLEAGSCIAFDHTKNKKISLEYPFRQAEETGTIAGSVTTAFPHFIIELVHSESGQVLDSIRDKKEYKFTLVPPGVYNVRVRVLNAGETEWSPGDIRKNIEPNPVTFYDSAITVIEKWDLQGIDLKC
SIO_010081: DK880_RS02450
subclass of: SO_0000673
so part of: DK880_RS02450
location: complement(606952..608697)
location: region:606952-608697:-1
so has part: feature:606952-608697:-1:exon

WP_109997241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:606952-608697:-1:exon

DK880_RS02455
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02455
old locus tag: DK880_00497
so part of: sequence
location: complement(608774..608847)
location: region:608774-608847:-1
so has part: feature:608774-608847:-1:exon
subclass of: SO_0000663

position:608774:-1
position: 608774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608847:-1
position: 608847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:608774-608847:-1:exon

DK880_RS02455
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 247481
locus tag: DK880_RS02455
old locus tag: DK880_00497
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(608811..608813),aa:Ala,seq:ggc)
SIO_010081: DK880_RS02455
subclass of: SO_0000673
so part of: DK880_RS02455
location: complement(608774..608847)
location: region:608774-608847:-1
so has part: feature:608774-608847:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:608774-608847:-1:exon

DK880_RS02460
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02460
old locus tag: DK880_00498
so part of: sequence
location: complement(608904..610388)
location: region:608904-610388:-1
so has part: feature:608904-610388:-1:exon
subclass of: SO_0000010

position:608904:-1
position: 608904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610388:-1
position: 610388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:608904-610388:-1:exon

DK880_RS02460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02460
old locus tag: DK880_00498
EC number: 6.1.1.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934518.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine--tRNA ligase
translation: MSFVEDSLSANASHHMFKAVVSHAYAYGFIYPSSAIYEGLQATYDYGPYGTALKRNVQEFWWKSMTQLQENIVGIDAAIMMHPTTWKASGHLDGFTDPMVDNKDSQKRYRVDWLIEAHAAQLVSQGQPTQAKKLLEAMGNYLALGDLAGIDALMQEFAIVCPLAKTANWTAVRQFNLMFATQVGAQEDATTLYLRPETAQGIFVNFLNVQKSARMQIPFGIAQIGKAFRNEIVARQFIFRMREFEQMEMQFFVPPGTEQTWFDYWQARRKVWYNVLGISDDKLRFHPHQQLAHYATAAVDIEYAFPFGSKEVEGIHSRTDFDLRNHAHYARKKIEYFDPELNKSYIPYVIETSVGLDRLILMLLSNAFTQEKETTDGCKARTYLKFPPPLAPIKAAVLPLVKKDGLETKALKLWNHLKCDFAVGYEATQSIGRRYTRQDLIGTPYCITVDYQTLEDDTVTIRARDSREQHRMDAAAVADFLHNKTSIKSLLLQL
SIO_010081: DK880_RS02460
subclass of: SO_0000673
so part of: DK880_RS02460
location: complement(608904..610388)
location: region:608904-610388:-1
so has part: feature:608904-610388:-1:exon

WP_109997242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:608904-610388:-1:exon

DK880_RS02465
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02465
old locus tag: DK880_00499
so part of: sequence
location: 611009..611320
location: region:611009-611320:1
so has part: feature:611009-611320:1:exon
subclass of: SO_0000010

position:611009:1
position: 611009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611320:1
position: 611320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:611009-611320:1:exon

DK880_RS02465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02465
old locus tag: DK880_00499
inference: COORDINATES: protein motif:HMM:NF024206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MLICSFNKQIEQTPSLHEAAYEGKLDCLTALIKGGADVNLKDKDGAAPLHLAAQEGKLDCLTALIKGGANVNQRDKDGRAPLDLAIQMKRLACIDRLQANGGE
SIO_010081: DK880_RS02465
subclass of: SO_0000673
so part of: DK880_RS02465
location: 611009..611320
location: region:611009-611320:1
so has part: feature:611009-611320:1:exon

WP_109997243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:611009-611320:1:exon

DK880_RS02470
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02470
old locus tag: DK880_00500
so part of: sequence
location: complement(611304..612860)
location: region:611304-612860:-1
so has part: feature:611304-612860:-1:exon
subclass of: SO_0000010

position:611304:-1
position: 611304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612860:-1
position: 612860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:611304-612860:-1:exon

DK880_RS02470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02470
old locus tag: DK880_00500
inference: COORDINATES: protein motif:HMM:NF006820.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoenolpyruvate carboxykinase (ATP)
translation: MPSRPVHYMDLSVSALIAHALQRGEGVLAANGALSVTTGKRSGRSPKDKFIVKTAEVADKIAWGPIHQAIEASVFQNLWERAMAYLATIDRFAAHLQLVTYFPYSLPITIISEYAWHTLFACQLFVRPQNKQLQDSNSMWTIVSLPGLLTDPDRDGVASDAALLIHLTARKVLLCGHRYAGEIKKAMFSVLSYLLPEQAVLPMHCAANVGEGGDVALFFGLSGTGKTALSSDATRYLIGDDEHGWSNQAVFNCEGGCYAKCFNLSLDQEPVIGQAIRYGSIMENVQLDPNTLEPNYGDATLTQNSRAAYPIDFVTQRLHAQWINRSPESIIFLTCDLYGVLPPVARLTEEQAAYYFLSGYTALVGSTEVGQKQRIQATFSSCFGAPFLIRPVETYLHLFRERLKESGATVYLVNTGWTAGSYGAGGYRFPIELTRTLIQAIVSGLLKEVTYDCLPGFNLAIPTALPAIDSAILDPRKNWQDKLLYQAKAKALITRFWENAARFHLEAAVQAAAPTLLH
SIO_010081: DK880_RS02470
subclass of: SO_0000673
so part of: DK880_RS02470
location: complement(611304..612860)
location: region:611304-612860:-1
so has part: feature:611304-612860:-1:exon

WP_109997244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:611304-612860:-1:exon

DK880_RS02475
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: lnt
locus tag: DK880_RS02475
old locus tag: DK880_00501
so part of: sequence
location: 613182..614867
location: region:613182-614867:1
so has part: feature:613182-614867:1:exon
subclass of: SO_0000010

position:613182:1
position: 613182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614867:1
position: 614867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613182-614867:1:exon

DK880_RS02475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: lnt
locus tag: DK880_RS02475
old locus tag: DK880_00501
inference: COORDINATES: protein motif:HMM:TIGR00546.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0016410 - N-acyltransferase activity [Evidence IEA]
GO process: GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]; GO:0006497 - protein lipidation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: apolipoprotein N-acyltransferase
translation: MPNYLDATLSPSGIAFLTRFPTKQTSRRYTWFWVCLSSSFFGLAWCSAYFGWLLGIAIIPMLLIMETRIAHKKCTGLGYVFLTLLFWNTLTLWWLYHAAPFAFLFTALYNVFCLFVPWLLYYYLRKWGGLYIGYMGLLTAWLTLEYAHLGWKYWEITFPWLNLGNGLAAMAPWIQWYAYTGILGGSLWILGINILLYHLLFKSATALWLKITACWILFPITSSLLLYYSYSDRGIAVEVVTVQPNFNSYTEKVCTSPSFVPYAKQIDRLLTLSKGALSPATSVIVWPESAIHTWLNEASIPYYPYMQPIWQLLQQLPTVHIITGASSFCEYGPTKTTQTARKIGETYIDLFNSILHLNNNKKIDIYHKEKRLPGAEYIPYAHLLPEPVLVWVKQMFEDIGDIDPTLGKGNGTKLFDIAPQIKVAPVNCYESIYGAFVGEATKKGATLLAILTNDNWWGDTPVYHQHFHYSRLLAIAHRRSIVRSANTGVSGFINQRGDVLAATNRLEAAAMQQRLYAHNTLTFYTLHGDYIGQTAAWACLCLLITTCMACWYKKKSLLNLS
SIO_010081: DK880_RS02475
subclass of: SO_0000673
so part of: DK880_RS02475
location: 613182..614867
location: region:613182-614867:1
so has part: feature:613182-614867:1:exon

WP_109997245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:613182-614867:1:exon

DK880_RS02480
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02480
old locus tag: DK880_00502
so part of: sequence
location: complement(615181..616200)
location: region:615181-616200:-1
so has part: feature:615181-616200:-1:exon
subclass of: SO_0000010

position:615181:-1
position: 615181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616200:-1
position: 616200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615181-616200:-1:exon

DK880_RS02480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02480
old locus tag: DK880_00502
EC number: 3.5.1.28
inference: COORDINATES: protein motif:HMM:NF013661.2
GO function: GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO process: GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-acetylmuramoyl-L-alanine amidase
translation: MHLKFLSRNWLLFFMMNCGHLENGRYGMEAVSPASALRAGDAFLKQLHNTVVSPCVLHGVEGYRVVPFVDKPNRNHYDSRGGSAVKYLIMHYTVCDFWHTMHLFTEDKDSNRVSAHFVITQEEAAAVAIGREAVPAGRLIQLVPDEQRAWHAGVSNWKNDVNLNPCSLGIEHVNQGGELDSKHFYPFNKDQIHTSGKISHNIVNQYTIDPVHVLGHSDIAPGRKSDPGPLFPWGALYHNHQVGAWLDTEEIGNPDMIKKKYGLRGFPCPTKSDRGALLSMLNSYGYYRDKKDKEGHLDAKIIAAYKSHFSANQRPDLCDAVIRENDMYWAWALNVKYKQ
SIO_010081: DK880_RS02480
subclass of: SO_0000673
so part of: DK880_RS02480
location: complement(615181..616200)
location: region:615181-616200:-1
so has part: feature:615181-616200:-1:exon

WP_162534129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:615181-616200:-1:exon

DK880_RS02485
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: gatC
locus tag: DK880_RS02485
old locus tag: DK880_00503
so part of: sequence
location: 616797..617189
location: region:616797-617189:1
so has part: feature:616797-617189:1:exon
subclass of: SO_0000010

position:616797:1
position: 616797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617189:1
position: 617189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616797-617189:1:exon

DK880_RS02485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: gatC
locus tag: DK880_RS02485
old locus tag: DK880_00503
inference: COORDINATES: protein motif:HMM:TIGR00135.1
GO component: GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO function: GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO process: GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
translation: MDLELYCNKIRNTIHNIAAPLSFFKFIDIMLIDHTLLDKLAYLARLEIRPHERASMLRDLNEVVAWVEQLNELDDLLLQQDYNAEVGPPVLAQANDLRRDEAAQVLSHEAALALAPDKDANYFRIPAVRT
SIO_010081: DK880_RS02485
subclass of: SO_0000673
so part of: DK880_RS02485
location: 616797..617189
location: region:616797-617189:1
so has part: feature:616797-617189:1:exon

WP_109997247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:616797-617189:1:exon

DK880_RS02490
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02490
old locus tag: DK880_00504
so part of: sequence
location: 617228..618277
location: region:617228-618277:1
so has part: feature:617228-618277:1:exon
subclass of: SO_0000010

position:617228:1
position: 617228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618277:1
position: 618277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:617228-618277:1:exon

DK880_RS02490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02490
old locus tag: DK880_00504
inference: COORDINATES: protein motif:HMM:NF015651.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysylphosphatidylglycerol synthase transmembrane domain-containing protein
translation: METQENNNLEALKVLNLRRIWFPTLCGLAILGFWFYRAGNKLTLATIAQLGRPNGYYLSMAFSSILLREIGHICRLRFLSNATLSWTSCFYIAILWEFSSALTPSVVGGGIVAIFLFSKEGLPLGRSLAYVIVNGIMDNFFFLLAGMPAFGGMYKPLFAMADEFDTVVKSIFFINYFILCIYTLVITMGVFINPTLLKYILLRITSIGFLKKWRRSAYHISKDIVITSHEFKGKGFFFWCKILSCTFFTWMARYSFLNCLIAAYTKVSLSQHVAMFGKQVIMWALMLIPFLPGGSGIAEYSFIQFFEPILGDYTPLIALLWRACTFFLYLLLGIIFLPRWIHRVLEKNA
SIO_010081: DK880_RS02490
subclass of: SO_0000673
so part of: DK880_RS02490
location: 617228..618277
location: region:617228-618277:1
so has part: feature:617228-618277:1:exon

WP_204082239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:617228-618277:1:exon

DK880_RS02495
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02495
old locus tag: DK880_00505
so part of: sequence
location: 618305..620788
location: region:618305-620788:1
so has part: feature:618305-620788:1:exon
subclass of: SO_0000010

position:618305:1
position: 618305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620788:1
position: 620788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618305-620788:1:exon

DK880_RS02495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02495
old locus tag: DK880_00505
inference: COORDINATES: protein motif:HMM:NF008897.0
GO function: GO:0008784 - alanine racemase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]
GO process: GO:0006522 - alanine metabolic process [Evidence IEA]; GO:0009058 - biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
translation: MIKSMPIAYFNELVSLTKGEIIAQVDNFPITELTVDSRYKTITDFPLFFALVGINHDGHAYMPEAYQKGIRQFVVNRDHSFSLPAKDVNILQVPHTLTALQQLAAFHRTKFPIAVLAITGSNGKTIVKEWMHLLLSSQYKTISSPHSYNSQVGVPLSVALLEPYHAYAIFEAGISTKGEMTKLAQIIQPTHGLFTNMGTAHSQGFQDEQEKLTEKANLFTACNKVYYCKEHTSIHTLLQQRHASNQTLVNWSLKQTEATYSVTLKQASQQTTVTIQAAHGAYDFTVSFQDYASLENLIHCLVYALDNGYNPAQLQSLLPQLKPLPMRLTLKSAIHRCKLIDDSYTNDLTSLKLALDFMQSYHKEAKQTIILSDMLQSALSGHALYASIAHVIQSYPISRFIGIGTAISAYSTLFTLPEKCFFNTVEAFIAHQPSFTEEVILIKGARPFQLERIVKRLENNNYGSILAIDVQAIRHNICYFRSKLNASTKVMAMVKAANYGSSSNHELTLLLQRYGLDYLGVAYVEEGIRAREQGITLPIIVMDPANDQWENILHYQLEPSIYSVDLLAELICFVKTKVVQPTLPIHLKLETGLYRLGISATELNTLLKQLKQCPSLQVVSLFSHLAASGTAEQDAYTLLQAERFRQMTQYIEEKLGTQPLKHLLNSNGALRFPQFQFDMVRLGIGLHGVGVAPSIQPHLMPSSTLKTTVSQVKEVPKGATIGYNRKALAKQAMTIAIIPIGYADGLNKIFGNGKGHVIIQNHYCPIIGDICMDRSMVDVTNKPVKRGEEVIIFNAQHSVEAVAQQIGSTSYEILTQISQRVKRIYYI
SIO_010081: DK880_RS02495
subclass of: SO_0000673
so part of: DK880_RS02495
location: 618305..620788
location: region:618305-620788:1
so has part: feature:618305-620788:1:exon

WP_162534130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:618305-620788:1:exon

DK880_RS02500
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02500
old locus tag: DK880_00506
so part of: sequence
location: 621178..621804
location: region:621178-621804:1
so has part: feature:621178-621804:1:exon
subclass of: SO_0000010

position:621178:1
position: 621178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621804:1
position: 621804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621178-621804:1:exon

DK880_RS02500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02500
old locus tag: DK880_00506
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLNFWLVGFSYLNIGCNKNIPTTMYQPTHPGPSTHTSEVCKTKEIHSPNQQEYDFAVVLRSSDIINLAIILKIGNDFQLFPGISDLKPDSNHIKQVISFLREETHDIPCRLVGSYVNNFGEMRNKNLIVSIASKLYPFQRAYAKIITKKEQGKHDGWLPLSTQLCRGESFEDLAIIGDSIQENNVFGKPHITAAIYKDMLHGPNITLI
SIO_010081: DK880_RS02500
subclass of: SO_0000673
so part of: DK880_RS02500
location: 621178..621804
location: region:621178-621804:1
so has part: feature:621178-621804:1:exon

WP_204082240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:621178-621804:1:exon

DK880_RS02505
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02505
old locus tag: DK880_00508
so part of: sequence
location: complement(622370..625363)
location: region:622370-625363:-1
so has part: feature:622370-625363:-1:exon
subclass of: SO_0000010

position:622370:-1
position: 622370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625363:-1
position: 625363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622370-625363:-1:exon

DK880_RS02505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02505
old locus tag: DK880_00508
inference: COORDINATES: protein motif:HMM:NF024824.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MLLFLQRFVLVLLCVNSLSQASLAVASPIIASPQLLFDKGMVLSQQQKHSTAQKYWEAYLNNTGKQCNKTEAAYYRIVSALENQEPDAELLVQRFILHYPHSQHVDSLRYRLAKFFFKQGSLSKCLLLYHTIHIKRLSPAEQESYPYELGNVYLTAKDWSKAKKKFTEIKNKTHPYYYPAQLRMAYIALKQEKYDQAIATLEAISKHINDLPEAISLTLEIYHKSRNFEKLLAYIPHLPATAFTKQEQLLIGDAYFFLKQYQAAVSHYQAYLRDGVYDPTTAAKLGYAFYAMQQYTQALTYFKPLLNQSDHNAQIAAYYSGLIYETTHATQAAIEAFEKAAKQKFNIELADLASIKCAGLYYQQGDLQAVIQAMGTFTQENKTSKHLISAQIMLIKSYYQTKSYTEALDYIATLPYKNETILKLYQKLLFYRGLEAYNQGALDVALSYLKQSLHFPFKAALVTQAHFWIAEAFAGLGAYAKALKFYTQLMQQGSANALYHERTLYGLAYAYFNTGNYKAAMTTFKQYAALLPEQPAASMHYDALLRLGDCYYVDKNYKEAITLYERVYAYNPAHVRYQEALIHQIMGNTTAATQCLQEIITQHAPTNYYEKACYQEACMAFDAGHYEIAIQKFSALLQKEPTLALQPDLLIKRALAYENLQKKEEAVADYIAILEKFPTHAHTESALMALSQLSAAEGKARQADYLQKYKQLPNALSSRSDAHALDAIKKLFYGQAYHKVLQQLTVFYTSYPNSTLLPEAYFLMAESYYRLHKISQALHYYKKVIESNQHALHIKAGLRLASIMYQRKQFQEALGYYQKLQKMEPTAKAYEQTLMGIVKSSFVLKKQQATLAACWQLLNNPNVTSVETIQQAHLYLGKVFMQQSEYKSAKSHFMKANMPLHTVAAAEAQYLLAHTTFTLKAYQDSLNSLFALIEKYPHHINYIDQAFLLMADNYIRLNNFTQAKATLDSIINKSKNKKTIATAKKKRNKVSAALKAK
SIO_010081: DK880_RS02505
subclass of: SO_0000673
so part of: DK880_RS02505
location: complement(622370..625363)
location: region:622370-625363:-1
so has part: feature:622370-625363:-1:exon

WP_109997251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:622370-625363:-1:exon

DK880_RS02510
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: holA
locus tag: DK880_RS02510
old locus tag: DK880_00509
so part of: sequence
location: complement(625465..626493)
location: region:625465-626493:-1
so has part: feature:625465-626493:-1:exon
subclass of: SO_0000010

position:625465:-1
position: 625465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626493:-1
position: 626493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625465-626493:-1:exon

DK880_RS02510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: holA
locus tag: DK880_RS02510
old locus tag: DK880_00509
EC number: 2.7.7.7
inference: COORDINATES: protein motif:HMM:TIGR01128.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit delta
translation: MIQSAETVLQKLQQGSYAPIYFLQGEESYHIDAITKQVADTLLTPAERSFNLTIFYGKECSMAALLTQARRPPIGTAKQVVIVKEAQEMSDLKQANGQKLLLNYLRCPSAATVLLFAYKYKTIDGRSLLYKALANHTVVVTAQKLYAQQLPAFIQSIVKKMGCTITDKAIGMLQTCLGNDLTKIANELHKLGINLTEGSSITDRMVETYIDLYQPFNIFALQKAIMQKDYAKSCQIVGQSAANIQAHAALPVVALLYNCFSKLIVLHETKATELTMLAQQIEVPPYFVPDYLNALKNYTLPQTLQNITYIYQADLQLKGIEPAPSTQQILQLLVFKLLHEIH
SIO_010081: DK880_RS02510
subclass of: SO_0000673
so part of: DK880_RS02510
location: complement(625465..626493)
location: region:625465-626493:-1
so has part: feature:625465-626493:-1:exon

WP_109997252.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:625465-626493:-1:exon

DK880_RS05545
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05545
pseudo: true
so part of: sequence
location: complement(<626930..627191)
location: region:626930-627191:-1
so has part: feature:626930-627191:-1:exon
subclass of: SO_0000010

position:626930:-1
position: 626930
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:627191:-1
position: 627191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626930-627191:-1:exon

DK880_RS05545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612390.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: DK880_RS05545
subclass of: SO_0000673
so part of: DK880_RS05545
location: complement(<626930..627191)
location: region:626930-627191:-1
so has part: feature:626930-627191:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:626930-627191:-1:exon

DK880_RS02515
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02515
old locus tag: DK880_00510
so part of: sequence
location: complement(627252..627614)
location: region:627252-627614:-1
so has part: feature:627252-627614:-1:exon
subclass of: SO_0000010

position:627252:-1
position: 627252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:627614:-1
position: 627614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:627252-627614:-1:exon

DK880_RS02515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02515
old locus tag: DK880_00510
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSFLLLPLKTPTASPQNALAQEGTILEKAIQHVTQSIAFVEGTTPFLKEDFQSILDKFAEWAYYFKSRAKRQDQLLVQPSVILLEALIDAGEVAYQKEKGYLVVSESLFIYLFIRIKMI
SIO_010081: DK880_RS02515
subclass of: SO_0000673
so part of: DK880_RS02515
location: complement(627252..627614)
location: region:627252-627614:-1
so has part: feature:627252-627614:-1:exon

WP_109997253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:627252-627614:-1:exon

DK880_RS05190
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05190
so part of: sequence
location: 627749..627934
location: region:627749-627934:1
so has part: feature:627749-627934:1:exon
subclass of: SO_0000010

position:627749:1
position: 627749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627934:1
position: 627934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:627749-627934:1:exon

DK880_RS05190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05190
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGNNSVIGCLLTVDLQQQIATSIPPTVIASPLRLQYNRSVHNRTVPWVKNKKKGTKSVLHR
SIO_010081: DK880_RS05190
subclass of: SO_0000673
so part of: DK880_RS05190
location: 627749..627934
location: region:627749-627934:1
so has part: feature:627749-627934:1:exon

WP_162534132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:627749-627934:1:exon

DK880_RS05550
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05550
pseudo: true
so part of: sequence
location: complement(628553..629266)
location: region:628553-629266:-1
so has part: feature:628553-629266:-1:exon
subclass of: SO_0000010

position:628553:-1
position: 628553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629266:-1
position: 629266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:628553-629266:-1:exon

DK880_RS05550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05550
inference: COORDINATES: protein motif:HMM:NF016629.2
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
SIO_010081: DK880_RS05550
subclass of: SO_0000673
so part of: DK880_RS05550
location: complement(628553..629266)
location: region:628553-629266:-1
so has part: feature:628553-629266:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:628553-629266:-1:exon

DK880_RS02530
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02530
old locus tag: DK880_00513
so part of: sequence
location: complement(629417..632980)
location: region:629417-632980:-1
so has part: feature:629417-632980:-1:exon
subclass of: SO_0000010

position:629417:-1
position: 629417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632980:-1
position: 632980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:629417-632980:-1:exon

DK880_RS02530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02530
old locus tag: DK880_00513
inference: COORDINATES: protein motif:HMM:NF012686.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MTLFNNLPLVMVIGFLLLTLVVGLYYSRKVKTFREYAVGNKQFATATLVATVLATRFGGGTLIRTVESVHSGGLYWIGIWLLACLNIWLISKLTLRMGPFMHHFSIAESIGSVYGKYPKVITAFASICSAIAALAGQITAMSMAIRMCINVANPQSIIILSSVILIIYSTFGGIRAVTFTDVLQLITFTLVIPLLAGSIFAKIDITSTEIISFLQAQQKFQFKNVYHYDLKLIGMLCLILSNLVANIQAVTIQRVYMSTNPIQANRVFLYASIFGTLIVGCIILIGLFVFIIAPELPQDKVWNYIMGTIPSFFKGFISISLLAMTMSTADSYLNTCSVMVSHDIIGTLENIRFPYVHRFRLARFITPIVKTFLQKKIAHPLLFIRLIALIVGLISMVVAWHCNDLLKLLLKVFDFSVPIITAPYILAIFGFRSSSYTALIGMIVGAFSILTWNKWVQPMVINGSFFCMLANGLAMLAAHYLLPQPAGTGWVPPDKTYQQVQQEKERMKRRNKRERAAFFTKENLTKLKPNAITVVLVGIYLVIVSLVSNYYYNGQAKDFWKCLPFCMLGAVYIGYVAFFTNKISDWVVGSCWFFSLLIALPLHLLLNCCLCKALLFPFLLFFIHGAVLLWALPLYWSLRGVLVTMGIIMVICCCKSTILWPASTELLPVLIAGLCLLIGIVYFKYQNRMQQERVTYFLQQNEYKASYELKKLAYSEELPTASSPQNALAQEGTILEKAIQNVTQSIAFVNSTTPFLKEDFQSILDKFAEWAYYFRSRAKRQDQLLLQPSIILLEALIDAGEVAYQKEKGYLPGLWVEEFVNMPATMLGDREQLVRLLFLAFSYVRQSSVSPRAPITLQLQSTQLRYKKREPLEEKESPDCITFPALALVVHTENKQIPLPTLQAVYDVESPATTQPVDPFVSQHKVNLRKKNLASIVHAHYGLLLLPHAEQLVCLLPLDVTQVREEMLGLSLPREAGTQEEASITPHEKTVSLAKLSAFHDWIPSFESIDPFLIAEILLLLRRCYGFKRHASGQLFYVRAVGIAEWVAAWTDGHAKLVYATLLYDLVRYTRLPLSYIKGNYNMGVYCFVENVIAIDSRERLEESLLAIANRLKESLQKEHISVLYVKLAERLYDLKHASGYKDPAVVQAMAKESLTIDVELAQRYGEPGMAILLKQAAEEALLINKQ
SIO_010081: DK880_RS02530
subclass of: SO_0000673
so part of: DK880_RS02530
location: complement(629417..632980)
location: region:629417-632980:-1
so has part: feature:629417-632980:-1:exon

WP_109997255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:629417-632980:-1:exon

DK880_RS02535
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02535
old locus tag: DK880_00514
so part of: sequence
location: complement(633529..633601)
location: region:633529-633601:-1
so has part: feature:633529-633601:-1:exon
subclass of: SO_0000663

position:633529:-1
position: 633529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633601:-1
position: 633601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:633529-633601:-1:exon

DK880_RS02535
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 247481
locus tag: DK880_RS02535
old locus tag: DK880_00514
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(633566..633568),aa:Lys,seq:ttt)
SIO_010081: DK880_RS02535
subclass of: SO_0000673
so part of: DK880_RS02535
location: complement(633529..633601)
location: region:633529-633601:-1
so has part: feature:633529-633601:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:633529-633601:-1:exon

DK880_RS02540
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: prfA
locus tag: DK880_RS02540
old locus tag: DK880_00515
so part of: sequence
location: complement(633789..634862)
location: region:633789-634862:-1
so has part: feature:633789-634862:-1:exon
subclass of: SO_0000010

position:633789:-1
position: 633789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634862:-1
position: 634862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:633789-634862:-1:exon

DK880_RS02540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: prfA
locus tag: DK880_RS02540
old locus tag: DK880_00515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004155391.1
GO function: GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
GO process: GO:0006415 - translational termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide chain release factor 1
translation: MIEKLKAIKERFHEIESAIYQPDRVNDIKAYAALNKEYSKLSKIVALYSRYESVLSNIKEAKEILHLEKDEAFREIAKQELALALDKKIVLEKQLRDALIPSDPNDSHNIVLEIRAGIGGDEAAIFTGDLFRMYKRFAEKMKWELSLIYTLEGTAGGWKEIVSTISGKDVYGLMKYESGVHRVQRVPATEAQGRIHTSAASVVVLPEMGEVEVNLDLNDVRKDTFCSSGPGGQSVNTTYSAVRLTHIPTGLVVSCQDGKSQIKNYEKALKVLRSRLYDREVEKQQAATSMERKSMVKRGDRGDKIRTYNFPQGRATDHRIGYTDHNLAALLDGSILEMIEALRVADHAQKLQSGESI
SIO_010081: DK880_RS02540
subclass of: SO_0000673
so part of: DK880_RS02540
location: complement(633789..634862)
location: region:633789-634862:-1
so has part: feature:633789-634862:-1:exon

WP_109997256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:633789-634862:-1:exon

DK880_RS02545
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rplT
locus tag: DK880_RS02545
old locus tag: DK880_00516
so part of: sequence
location: complement(635198..635542)
location: region:635198-635542:-1
so has part: feature:635198-635542:-1:exon
subclass of: SO_0000010

position:635198:-1
position: 635198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635542:-1
position: 635542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:635198-635542:-1:exon

DK880_RS02545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rplT
locus tag: DK880_RS02545
old locus tag: DK880_00516
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012472731.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L20
translation: MPRSVNAVASKARKKRILRLAKGYWGKRKNVWTVAKNAVEKGLLYAYRDRKTKKRTIRALWIQRINAAARLHGISYAQFMGKLKLANIQLNRKVLADLAMNHPAAFEAVVQKVA
SIO_010081: DK880_RS02545
subclass of: SO_0000673
so part of: DK880_RS02545
location: complement(635198..635542)
location: region:635198-635542:-1
so has part: feature:635198-635542:-1:exon

WP_109997257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:635198-635542:-1:exon

DK880_RS02550
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rpmI
locus tag: DK880_RS02550
old locus tag: DK880_00517
so part of: sequence
location: complement(635666..635866)
location: region:635666-635866:-1
so has part: feature:635666-635866:-1:exon
subclass of: SO_0000010

position:635666:-1
position: 635666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635866:-1
position: 635866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:635666-635866:-1:exon

DK880_RS02550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rpmI
locus tag: DK880_RS02550
old locus tag: DK880_00517
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009582902.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L35
translation: MPKVKTHSGATKRFQITGSGKIKRKYAFKNHCLAKGIKSTKRKRHLTHKTLVHPTNVPMIQKLLAI
SIO_010081: DK880_RS02550
subclass of: SO_0000673
so part of: DK880_RS02550
location: complement(635666..635866)
location: region:635666-635866:-1
so has part: feature:635666-635866:-1:exon

WP_109997258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:635666-635866:-1:exon

DK880_RS02555
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: infC
locus tag: DK880_RS02555
old locus tag: DK880_00518
so part of: sequence
location: complement(636086..636595)
location: region:636086-636595:-1
so has part: feature:636086-636595:-1:exon
subclass of: SO_0000010

position:636086:-1
position: 636086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636595:-1
position: 636595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:636086-636595:-1:exon

DK880_RS02555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: infC
locus tag: DK880_RS02555
old locus tag: DK880_00518
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934892.1
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-3
translation: MREMHNVNERIMAPTVRLVGENVRVGVYSIGEALAIAEDLALDLVEISKSDGYPVCKVMDYAKFKYLQKKKHKEIKGNTHKVIVKEIRFGPNTSDHDFDFKLRHAINFLGTGAKVKVCVKFIGRQIIFKERGESILLRFFQGLENYGKMEQSPKLEGKRMSMMIAPLKS
SIO_010081: DK880_RS02555
subclass of: SO_0000673
so part of: DK880_RS02555
location: complement(636086..636595)
location: region:636086-636595:-1
so has part: feature:636086-636595:-1:exon

WP_109997259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:636086-636595:-1:exon

DK880_RS02560
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02560
old locus tag: DK880_00519
so part of: sequence
location: complement(636648..637835)
location: region:636648-637835:-1
so has part: feature:636648-637835:-1:exon
subclass of: SO_0000010

position:636648:-1
position: 636648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637835:-1
position: 637835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:636648-637835:-1:exon

DK880_RS02560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02560
old locus tag: DK880_00519
EC number: 2.5.1.145
inference: COORDINATES: protein motif:HMM:NF013915.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prolipoprotein diacylglyceryl transferase
translation: MTMVWDVNPILFQKGFFMLRWYGICFTAAFMIALPFWHYMFAKAGKAREEAERLTTYIAIGVMAGARLGHVIFYDWSTYKHNLVAIFSPIVFSPEFQIVGFSGLASHGAAIGIVVAIFFYIKRISIALVPPRIRLISRRPAHEFLWILDHLVILFALGGACIRIGNFMNSEIIGKPTQKNYGVVFAREVREELSARYAAVIQTMDFQKETTCALPIKKHYQPLRLTLSFKEEVQDEEVITRLLQKLKKDLVRLSYVDQPMIYEPYETALSYELIQRKPNVNYQVVVHTSGILRHPTQLYEALSCFCIFILSFIWWYTKRQVIARGCMFGTFMLIIPLFRFFHEFYKEYQVAFEQTMWLNMGQLLSLPWMLIGLFLILRSVKLGHTGVIQKKGEGL
SIO_010081: DK880_RS02560
subclass of: SO_0000673
so part of: DK880_RS02560
location: complement(636648..637835)
location: region:636648-637835:-1
so has part: feature:636648-637835:-1:exon

WP_162534133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:636648-637835:-1:exon

DK880_RS02565
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02565
old locus tag: DK880_00520
so part of: sequence
location: complement(637854..639365)
location: region:637854-639365:-1
so has part: feature:637854-639365:-1:exon
subclass of: SO_0000010

position:637854:-1
position: 637854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639365:-1
position: 639365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:637854-639365:-1:exon

DK880_RS02565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02565
old locus tag: DK880_00520
EC number: 3.4.11.1
inference: COORDINATES: protein motif:HMM:NF002074.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: leucyl aminopeptidase
translation: MSRVAIEFQFLDNQEVQETLPCYAIAVPEDPMQLHNDPLISEHFYHQVITPLVKETLFKGKQNTIVSANCFHHIEKVILFGLGRKEAIDEVVIRKAASKVYRECMLLHSKSVVVNFAFLADNPVYIKAFAEGVLLAAHYDERFKSQKKDTTIPSLRKVVLLDVLDNAENNEAIQLAEKITKGVYLAKELVNAPANHVTPTVLAKTAIELAEKYHFDINILEKEDCARLGMAAYLSVSQGSDQPPKFIHLVYKPKSLDPHAPYKKIAFIGKGVTFDSGGLNLKIGAAHIELMKCDMAGAAALLGAAEAIGALKPNKEIHFIIAATENMISGSATKPGDVVTASNGTTIEIDNTDAEGRLTLADALVYAERLEVEVIVDLATLTGAIVVALGDHIAGLFANQSELIQSLTLAAKRTDEKVWEMPLEEAYREDMQSMVADIRNTGSKQRNAGSITAALFLKQFVQKTPWAHLDIAGTAWREQACAYHGAGATGFGVRLLVDWILHA
SIO_010081: DK880_RS02565
subclass of: SO_0000673
so part of: DK880_RS02565
location: complement(637854..639365)
location: region:637854-639365:-1
so has part: feature:637854-639365:-1:exon

WP_109997261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:637854-639365:-1:exon

DK880_RS02570
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: aspS
locus tag: DK880_RS02570
old locus tag: DK880_00521
so part of: sequence
location: complement(639550..640929)
location: region:639550-640929:-1
so has part: feature:639550-640929:-1:exon
subclass of: SO_0000010

position:639550:-1
position: 639550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:640929:-1
position: 640929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:639550-640929:-1:exon

DK880_RS02570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: aspS
locus tag: DK880_RS02570
old locus tag: DK880_00521
EC number: 6.1.1.23
inference: COORDINATES: protein motif:HMM:NF003483.0
GO function: GO:0050560 - aspartate-tRNA(Asn) ligase activity [Evidence IEA]
GO process: GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]; GO:0006422 - aspartyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate--tRNA(Asn) ligase
translation: MHALVEIKNLSSLSEQEIVRVRGRVFSKKVHGTLLFLILRDGLHTLQVIVVKGKAVAGHAFSDSCYDELRKVENESFIEAIGIVQRTEKPVLACSQQKIELRLIAYTLMSRATLTLPITLKETERAEVAAAIPYGKRLDNRVLDLRTRLSQAIFRVNDGMLGYIQKYLREEEFMEIKTPKLIGGSSEGGAAPFRLDYFGEPACLAQSPQLYKQMVLMGGFKRVFEIGPVFRAEHSHTTRHLTEFVGIDLEMLLDETYQEVIQLLYRLLTSLFTKLNEQYSSEIAFIQAFFHTTPLLFAPELVALTFPEAVALLSASGSTRGEEEDFSTEEEKQLGAIIREQYQTDLYVVTGYPAAVRPFYTFIDPENPTYTYGYDFMLRGMEILSGAQRIHDYKLLSERAAALGIAAHTMSHYLEAFQYGAPPHAGAGMGLERLLRAFLGLPDVRYSSLFPRYPKRLYP
SIO_010081: DK880_RS02570
subclass of: SO_0000673
so part of: DK880_RS02570
location: complement(639550..640929)
location: region:639550-640929:-1
so has part: feature:639550-640929:-1:exon

WP_109997262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:639550-640929:-1:exon

DK880_RS02575
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: mtaB
locus tag: DK880_RS02575
old locus tag: DK880_00522
so part of: sequence
location: complement(641181..642491)
location: region:641181-642491:-1
so has part: feature:641181-642491:-1:exon
subclass of: SO_0000010

position:641181:-1
position: 641181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642491:-1
position: 642491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641181-642491:-1:exon

DK880_RS02575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: mtaB
locus tag: DK880_RS02575
old locus tag: DK880_00522
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011585121.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB
translation: MKKVSFHTLGCKLNFAETATISRLFGQKGFVTVSLDQRPHVFVLNSCSVTENADRKCAKVVKHALKMAPSAFVIVIGCYAQLQPEAIAQIPGVDAVLGSNEKFKLLDLLTDFDKKEGNETATIQVAPIQESRTFSPAYSLSDRTRAFLKVQDGCNYKCTFCTIPLARGSSRSAPIAEVVAQARAIAVKGIKEIVLTGVNLGDFGLIDNKRTAHFLELIQALEAVEGIERFRISSIEPNLLNKAIITFVAQSKCFMPHFHIPLQSGSDKILKLMHRRYNTQLYQDRIETIAKEIPTCCIGVDVIVGFPGETEEDFLTTYHFLNSLPIAYLHVFPYSERAQTKAATMAASVPFAERARRAHMLRTLSEKKLRYFYSQHLGQQARVLFEQAEAEEPVEGFTENYIRVQLPYQQGLSGKVCPVILQTIHTEGVVIPKLLS
SIO_010081: DK880_RS02575
subclass of: SO_0000673
so part of: DK880_RS02575
location: complement(641181..642491)
location: region:641181-642491:-1
so has part: feature:641181-642491:-1:exon

WP_109997263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:641181-642491:-1:exon

DK880_RS02580
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: lon
locus tag: DK880_RS02580
old locus tag: DK880_00523
so part of: sequence
location: complement(642516..645008)
location: region:642516-645008:-1
so has part: feature:642516-645008:-1:exon
subclass of: SO_0000010

position:642516:-1
position: 642516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645008:-1
position: 645008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642516-645008:-1:exon

DK880_RS02580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: lon
locus tag: DK880_RS02580
old locus tag: DK880_00523
EC number: 3.4.21.53
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934869.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endopeptidase La
translation: MYFNNTSLIIDGALSAAWGGDSLGGMVELIVSDDTEQLAGKDTLDKIPLLTPCHVVLFPNVVMSITLKERHSIHLLETVQERDGFLGIVAQQNTETTVENTPHRYGVGTLAKVIKIINLPNGKTIVLVHGKQKFQVLRTFATASGLEATIQLLKDQPYKEDKKVIALMQSLKDVAIKILKFRSEAFNEAQAILVNIKNLDFLTYFLASNLNSDIHYKQKLLELNSSVKRANLLLKHLLKELEISELKKEIQDKVHSDISQQQRDYYLRQQVKILQDELGENDLSEEIEVLRAKGNKKQWPKEVADFFKKELDKAERMSQQSPEYVTSINHAEVLVELPWGVYTKDNLDINKAKKFFDAAHYNIEKVKERLLEFLAILKLKKNMKGPILCLCGPPGVGKTSLGKSIAKAMGRKYARIALGGLNDEAEIRGHRKTYIGAMPGKIIYNIQRVGASNPVVVLDEIDKIDRMRGDPAAALLEVLDPEQNHTFVDNFLEVPYDLSNVLFVATANTMDRIPAALQDRMEVIEVNGYSLEEKVEIAKRYLLPKQRKEHGLKATDLSIQDDAYAAIIDGYTRESGIRELARQIAGVCRKLAKSVALKEPYLKKVKKSDIATFLGPVIFDNTDYQHARIPGVSVGLAWTASGGEILFIEAVLSKGKGRIHLSGQLGEVMKESAMTALSYLKANEQYLDVSHDIFENYDLHIHVPAGAIPKDGPSAGITLFTSLVSLYTQKKVRDSLAMTGEITLRGQVLPVGGIKEKILAAKRVGIKEIILSSKNKKDVQEIKASYREKLIFHYVDWVDEVYRLALQPDKATDAKRWHAPVVDSRQEPTV
SIO_010081: DK880_RS02580
subclass of: SO_0000673
so part of: DK880_RS02580
location: complement(642516..645008)
location: region:642516-645008:-1
so has part: feature:642516-645008:-1:exon

WP_109997264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:642516-645008:-1:exon

DK880_RS02585
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rseP
locus tag: DK880_RS02585
old locus tag: DK880_00524
so part of: sequence
location: complement(645124..646446)
location: region:645124-646446:-1
so has part: feature:645124-646446:-1:exon
subclass of: SO_0000010

position:645124:-1
position: 645124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:646446:-1
position: 646446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:645124-646446:-1:exon

DK880_RS02585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rseP
locus tag: DK880_RS02585
old locus tag: DK880_00524
inference: COORDINATES: protein motif:HMM:TIGR00054.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RIP metalloprotease RseP
translation: MASVLIQVIQFLAGLSLIVGIHELGHLFFAKLFKMRVNSYIIGFPPKIFKIRYGETEYAIGSIPLGGAVHIAGMLDESCPSTPAADLPQPWEFRSKPAWQRLIVILGGIIFNLLSSLLIYIGLCYAMGYHFLSKDSVNQYGIMPNAVGVQMGFKPGDKVIKINGKDFENFHDIYTAAISLHASSYYTVCRAGQTLELPIIPERFMALAKEETVGFIRPMQPCIIASVDSHSSAELSGLMAGDQIVKLADQDIFDCAQLMEVLPSFLGKSVSILYMRKGYPMATSLTIDAKTKRLGIGIAPPALTYIKQSYSLLQAIPVGLQQATTVMQQQLWGMWKIVTGKLSIKKSLGGPISLATMFERTFVWHRFLTLVAMLSIVIGLTNAFPLPVLDGGHALFILYEMLFRKKVPDRVIQLTQQIGWVLLVLIMLYVCGNDTYKLFA
SIO_010081: DK880_RS02585
subclass of: SO_0000673
so part of: DK880_RS02585
location: complement(645124..646446)
location: region:645124-646446:-1
so has part: feature:645124-646446:-1:exon

WP_109997265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:645124-646446:-1:exon

DK880_RS02590
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02590
old locus tag: DK880_00525
so part of: sequence
location: 646707..647156
location: region:646707-647156:1
so has part: feature:646707-647156:1:exon
subclass of: SO_0000010

position:646707:1
position: 646707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647156:1
position: 647156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:646707-647156:1:exon

DK880_RS02590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02590
old locus tag: DK880_00525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934810.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YcxB family protein
translation: MPSGLYIKLGMQNILRLHWWIFLLLLLGISATFFIKTIWFIVGSMLFFIGYLLFWLIQFYGFTQLEENRLIFERVIYEINNQYLIMQVNSRQAIPFPWINITKAYKKKAYFLLILSKAQFFCLPFKIFRGDNEVKLFTTLLQRKGLLKG
SIO_010081: DK880_RS02590
subclass of: SO_0000673
so part of: DK880_RS02590
location: 646707..647156
location: region:646707-647156:1
so has part: feature:646707-647156:1:exon

WP_239302499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:646707-647156:1:exon

DK880_RS02595
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02595
old locus tag: DK880_00526
so part of: sequence
location: 647284..649152
location: region:647284-649152:1
so has part: feature:647284-649152:1:exon
subclass of: SO_0000010

position:647284:1
position: 647284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649152:1
position: 649152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:647284-649152:1:exon

DK880_RS02595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02595
old locus tag: DK880_00526
inference: COORDINATES: protein motif:HMM:NF025009.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SurA N-terminal domain-containing protein
translation: MTLLENIRKKAGSACIVIVIGCCIPLLLQGISDMGQYFSFPCFHKDVEAVGYVEGIPISIKDYHNGIKNKLKAQHTKPTEKAQMDAKQSVWEELIRKELYEKELKRLNLSMGTDALSMDEWIDLIKEEIKESPFDQQQWLTWLNDIERSKDGEKILRQIGHGFSFKKAVNQLNKLMVQSNFTTSLEKTHKAKYREMLCDVTYLYIPFTSISDDLVTLTTESLQEYVLRHKAQYSKNSDSINIQYIAFPIQPDEKDNVHFQKALDRLTAQFSSASDPYYFAQKNTDGHPTHTRLECSRDALPEAFASIKHTLQRGMVVGPVVQEGFHRLYKVVAVTANQGGNATYQIAVIEKKQAISKRARAKQYKRVENFAAKVKSMNDFKAIAEQQGIAVQEATNLTPADSAIGPYGAAKAVIHWLYTESKTGAISPIFTLEDVYLLVIMTEKTKKGTLPSLDSDAMYYNVRTKVLNEAKATIIKTNLTQQLQQLCNQPQAAILPAIAAQYKEQPIELKSVKGVRFSKNEDRLLNKANVLIGSCFGLTAGTLSEPIVDAAAEGVFIVHVENKQPQTMASTEEGDELNKPTESFMQSYYVSIESYYVSESMKELAHIVDKRYNYNDATGARL
SIO_010081: DK880_RS02595
subclass of: SO_0000673
so part of: DK880_RS02595
location: 647284..649152
location: region:647284-649152:1
so has part: feature:647284-649152:1:exon

WP_109997266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:647284-649152:1:exon

DK880_RS02600
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02600
old locus tag: DK880_00527
so part of: sequence
location: 649224..650216
location: region:649224-650216:1
so has part: feature:649224-650216:1:exon
subclass of: SO_0000010

position:649224:1
position: 649224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650216:1
position: 650216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:649224-650216:1:exon

DK880_RS02600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02600
old locus tag: DK880_00527
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012472768.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DHH family phosphoesterase
translation: MKAQLVSPKRITIVMHTGPDADALGTSLALGLFLSAEGHSVQVIAPTAYPDFLSWLPGADKVVVAETYTAEALEARIGDIDLLFCIDFSTASRLGLLEFILKKPGVIKVVIDHHTEPEDFADIFFWDPKAAASGEVLFQLIESLGQKNNLTTSIATCLYAALITDTNSFKNPNTTPKTHRIAAELMEHGVDTFGVQRLIYDNKSLNRLHFFGFAINQRLIVLPDLHTAYFVIQKEDCKRYHLKQGDTDGLIFHALSLQGIALAAVLQEKEDMVSISLRSVGELPVNAIAKQYFNGGGHRNAAGGISNLSLTETIDQFEQGLKQFMLNHTV
SIO_010081: DK880_RS02600
subclass of: SO_0000673
so part of: DK880_RS02600
location: 649224..650216
location: region:649224-650216:1
so has part: feature:649224-650216:1:exon

WP_239302500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:649224-650216:1:exon

DK880_RS02605
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02605
old locus tag: DK880_00528
so part of: sequence
location: 650235..651212
location: region:650235-651212:1
so has part: feature:650235-651212:1:exon
subclass of: SO_0000010

position:650235:1
position: 650235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651212:1
position: 651212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:650235-651212:1:exon

DK880_RS02605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02605
old locus tag: DK880_00528
EC number: 5.2.1.8
inference: COORDINATES: protein motif:HMM:NF012478.2
GO function: GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FKBP-type peptidyl-prolyl cis-trans isomerase
translation: MKGRTSILFLFLAASLGLVWYNHQHHQYGYPFMQLSSGISYKRMMPGNGRKIQHGEWVIFSFEIKKIADKKKQAAQAQQANGATTIANESNILWQFNDNLVKPYKQLIEVIGMVEEKQRMIFKCTPQHMLADVDPLSVEALLKIFQLKADDKLMVDITVNKIMTDAARMEMVRKKAEDRAAQLEKDKKLIIDYLKEHNIPAETTDAGLFYTIDQPSQDAPVVQNETVAVHYIGKFLDGTVFDTSIAEVAKAHNLYNATRDYKPFKFLVGNGEVIAGWDKGLPLLKKNEKARFFIPSALAYGEKGNSHIPPNTVLIFDIQVINIGS
SIO_010081: DK880_RS02605
subclass of: SO_0000673
so part of: DK880_RS02605
location: 650235..651212
location: region:650235-651212:1
so has part: feature:650235-651212:1:exon

WP_109997268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:650235-651212:1:exon

DK880_RS02610
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02610
old locus tag: DK880_00529
so part of: sequence
location: 651225..651809
location: region:651225-651809:1
so has part: feature:651225-651809:1:exon
subclass of: SO_0000010

position:651225:1
position: 651225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651809:1
position: 651809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:651225-651809:1:exon

DK880_RS02610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02610
old locus tag: DK880_00529
inference: COORDINATES: protein motif:HMM:NF024206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MIDMRRRLLYTICLLIQMVKRPLLLVMVCCWMQAGSCQQTNATDFTRLTLKEAVKEGNINKFNTCLKAKQDLTEPDKDGNTLLHWACGDTKSTMGNEKATQDRIAIIEKLLRGGIDINAAGYNGWTALHFAVNEACKKTYKKEKEAYIKVINVLLKEGATKNCKDIHGYTPLYYAYTMNDQEIITFLKNKKATL
SIO_010081: DK880_RS02610
subclass of: SO_0000673
so part of: DK880_RS02610
location: 651225..651809
location: region:651225-651809:1
so has part: feature:651225-651809:1:exon

WP_109997269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:651225-651809:1:exon

DK880_RS02615
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: pheS
locus tag: DK880_RS02615
old locus tag: DK880_00530
so part of: sequence
location: complement(651804..652838)
location: region:651804-652838:-1
so has part: feature:651804-652838:-1:exon
subclass of: SO_0000010

position:651804:-1
position: 651804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:652838:-1
position: 652838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:651804-652838:-1:exon

DK880_RS02615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: pheS
locus tag: DK880_RS02615
old locus tag: DK880_00530
EC number: 6.1.1.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011586597.1
GO component: GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO function: GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phenylalanine--tRNA ligase subunit alpha
translation: MLHIIIELQEKIKKTELNSSAALEDFRRDFISKKGKLAALFEAFKTLSTLEKKQIGPALNALKQAAEKKFKEASKQWQQSTPQTAGGQPVDVTLPAIGPPLGSLHPVRIVQNKIIALFEQMGFNLTEGLEIVDDWHNFAALNFPENHPARAMQDTFFLQRHPDRLLRTHTTSVQIAACTAQSPPIRSITAGRVFRNEAISARSHCFFHQVDGMFIDTHVTFSDLQATIRHLVSALFGTATPVRFRASYFPFTKPSIEVDIGCILCQGKGCTVCKQSGWVEILGAGMIDPTVLMNCRIDTAKQSGFAFGMGMERIAMLLYKIEDVRLFSEHDLMFLRQFTACADL
SIO_010081: DK880_RS02615
subclass of: SO_0000673
so part of: DK880_RS02615
location: complement(651804..652838)
location: region:651804-652838:-1
so has part: feature:651804-652838:-1:exon

WP_109997705.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:651804-652838:-1:exon

DK880_RS02620
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02620
old locus tag: DK880_00531
so part of: sequence
location: complement(652849..654507)
location: region:652849-654507:-1
so has part: feature:652849-654507:-1:exon
subclass of: SO_0000010

position:652849:-1
position: 652849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654507:-1
position: 654507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:652849-654507:-1:exon

DK880_RS02620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02620
old locus tag: DK880_00531
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGTAVCYAQKEENELKEAQFVIEKHKKNKIESVPKLFFKAPTQTVKSEQQSLAMLQALAPYVFPLDPVAEVLSPFPLKQAPLTLSFPSYLNLGLLNMVFLFMELTYYPSFLRRQGKGVGYLHATYAPFYWHRSWKSPMVAVEGQGKFTIGAWLFYPALQYQYETYRFLPETNSSYPSMKRGIQQIAGTLRLQHAHASAAHTVQIAYDWLACQNKKNKKISEKCLIAQYKGIKRLESYALHVKVYGNLAGHHSAATAQPLRGILSLKPGITVDFPQAVQLKTSIKGSYHNAPIANGDVHWQLYPTVLLKHAAISWLNPYITIQGLGIGNAVQPLHLRDIVIKDPFITDAYTLKHYSKGFHFQLGSRGELLAMRTLSYHIYMAYSHFNNLPEKRKASANQSHLYALYYKDELQKLWNPTAILYYNDPRLNIHMTLKLQGWLGKEEVATGYLLNKPNRKVKFTTAYQVAPKCLLTAVASLYGMPPLRAEGDSGAVSREPKVGFEGGLSGSYAFDARSYVYLTVKYARYPYKFAHYTGRGYEGSPFSMSLGVIYEW
SIO_010081: DK880_RS02620
subclass of: SO_0000673
so part of: DK880_RS02620
location: complement(652849..654507)
location: region:652849-654507:-1
so has part: feature:652849-654507:-1:exon

WP_109997270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:652849-654507:-1:exon

DK880_RS02625
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: lepB
locus tag: DK880_RS02625
old locus tag: DK880_00532
so part of: sequence
location: 654880..656073
location: region:654880-656073:1
so has part: feature:654880-656073:1:exon
subclass of: SO_0000010

position:654880:1
position: 654880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:656073:1
position: 656073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:654880-656073:1:exon

DK880_RS02625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: lepB
locus tag: DK880_RS02625
old locus tag: DK880_00532
EC number: 3.4.21.89
inference: COORDINATES: protein motif:HMM:NF021981.2
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal peptidase I
translation: MVGAAGFIVRNSSVLFRTRTKGEKMGNVFLGKKQKKNKKAVLHTLREWVSSLSLAIIAATLIRWVLMGLYVIPSESMEPTLLTGDFILVSKLHYGARTPTTPLQLPLTHQTLPFLNAAGKKIKAYSDWLQLPSYRLPGISKVQRNDVIVFNQPIGPEPPDLRDYWIKRCVAIPGDLLHIVHKKLYINGTLRVTSGEQYRYFVQTKRHLTDVFFEKNGIKRYKADTMFGQTGYAIHTTPEKVKQLIAILPAYIHAIDPVEDIRGIFQSAIYPFHAAFSWSKDNFGPLTIPKKGMTVPMNEENSILYGQTIERFEGKKSVQFTEGSCWIDGKAVSAYTFCKDYYFVMGDNRDNSCDGRFIGFVPEDYIVGKAIIVLLSSSSSKGFWHGIRWNRFFKQIH
SIO_010081: DK880_RS02625
subclass of: SO_0000673
so part of: DK880_RS02625
location: 654880..656073
location: region:654880-656073:1
so has part: feature:654880-656073:1:exon

WP_109997271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:654880-656073:1:exon

DK880_RS02630
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: proS
locus tag: DK880_RS02630
old locus tag: DK880_00533
so part of: sequence
location: 656085..657557
location: region:656085-657557:1
so has part: feature:656085-657557:1:exon
subclass of: SO_0000010

position:656085:1
position: 656085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657557:1
position: 657557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:656085-657557:1:exon

DK880_RS02630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: proS
locus tag: DK880_RS02630
old locus tag: DK880_00533
EC number: 6.1.1.15
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012779836.1
GO function: GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO process: GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: proline--tRNA ligase
translation: MSAPAFPTRSHDFSAWYNALIVRAGLAENAPVRGCMIIKPYGYAIWERLQAIFDHAFKETGHMNAYFPLLIPKSYLHKEAAHVEGFAKECAIVTHYRLKMDNGALVVDPAAQLEEELIVRPTSETIIWHTYKQWIQSYRDLPILLNQWCNVVRWEMRTRLFLRTTEFLWQEGHTAHATQAEAEAETLQMLTLYERIIRDYMAMPVIKGLKTDHERFAGAEKTYTIELLLQDGKALQAATAHYLGQRFSRAFGVTFTNQAGIREYAWGSSWGTTTRLMGALVMMHADDNGLVLPPKIAPIQVVLIPVYRTATERIEVVNQLVHLQAVLKAEAIRVKLDDNDLYKPGYKFFEYEQQGIPIRIVIGPKDLHHNRAELARRDSKEKVSVAIADVVPQVMDWLSSIQEHIYQRALAFQQQHIHLVDDYATFKQLIASKGGLLLAHWDGTSETEATIKAETKATIRCIPLDRAAEAGKCIYTGRPSPKRVIFAQAY
SIO_010081: DK880_RS02630
subclass of: SO_0000673
so part of: DK880_RS02630
location: 656085..657557
location: region:656085-657557:1
so has part: feature:656085-657557:1:exon

WP_109997272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:656085-657557:1:exon

DK880_RS05195
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05195
old locus tag: DK880_00534
so part of: sequence
location: 657837..658052
location: region:657837-658052:1
so has part: feature:657837-658052:1:exon
subclass of: SO_0000010

position:657837:1
position: 657837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658052:1
position: 658052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:657837-658052:1:exon

DK880_RS05195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05195
old locus tag: DK880_00534
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIPLSALFICSVILPYMDATAQLAMRIILIRAITHPSLKKKAMAINGNEALEKHKEETKKVAGIMRIAKGN
SIO_010081: DK880_RS05195
subclass of: SO_0000673
so part of: DK880_RS05195
location: 657837..658052
location: region:657837-658052:1
so has part: feature:657837-658052:1:exon

WP_162534134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:657837-658052:1:exon

DK880_RS02635
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02635
old locus tag: DK880_00535
so part of: sequence
location: 658104..658289
location: region:658104-658289:1
so has part: feature:658104-658289:1:exon
subclass of: SO_0000010

position:658104:1
position: 658104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658289:1
position: 658289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:658104-658289:1:exon

DK880_RS02635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02635
old locus tag: DK880_00535
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLQGYSSYPLLFGLHRSVTGGNSLLIKQPALETSSLIVLLKAVAVPYGLLSNLFLIQIIEK
SIO_010081: DK880_RS02635
subclass of: SO_0000673
so part of: DK880_RS02635
location: 658104..658289
location: region:658104-658289:1
so has part: feature:658104-658289:1:exon

WP_109997273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:658104-658289:1:exon

DK880_RS02640
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02640
old locus tag: DK880_00536
so part of: sequence
location: 658900..659715
location: region:658900-659715:1
so has part: feature:658900-659715:1:exon
subclass of: SO_0000010

position:658900:1
position: 658900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659715:1
position: 659715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:658900-659715:1:exon

DK880_RS02640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02640
old locus tag: DK880_00536
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTNADNIVKIASRLTHDSLKKALESVKILGEIIDTLLLLRPLMPAQENRFLQKCKRIMHIEGSSKYDLLGVALLGGGAASITFLSNVASSYLSHSLGVAEPYIAYSMSTALPATLLTGSFSLIAVLGMTQWNRMGNTQKPRLSRKALMKEKEKAEEALNHAYELSKKNKESYSFDFDFIERHAKPAREQMKKLFCNTYDLAAERDESLLLFFPHALAELENLLEKLKESLQSISEMLQEGEFKRQVEKCDEYRCFIKTMFGLKGKEHYVT
SIO_010081: DK880_RS02640
subclass of: SO_0000673
so part of: DK880_RS02640
location: 658900..659715
location: region:658900-659715:1
so has part: feature:658900-659715:1:exon

WP_204082242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:658900-659715:1:exon

DK880_RS02645
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02645
old locus tag: DK880_00537
so part of: sequence
location: 659810..660760
location: region:659810-660760:1
so has part: feature:659810-660760:1:exon
subclass of: SO_0000010

position:659810:1
position: 659810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660760:1
position: 660760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:659810-660760:1:exon

DK880_RS02645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02645
old locus tag: DK880_00537
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHSNENYGQETGTSTISSGNNKENQLTNRGSLMGESLTLEKELLDDMGRITDYFTNVQKIVSQKIKWNTLLKMGMVATLSYLPPFLLWGYNYYYNFSTGPTIPSSYDDPIPMLFFPEATATSLINDRVPTIFQVEPSTSSYPNTMPSISQVALNPTASFNNIAIYKIAWIGSSACLGAGITVYQYGDLLSAASKAAVGLQEIIAEVQTAFEQAEKNPSDANQIHYAKIALVKLFKEVSTVIHKMSTKLFHHCFPKEAKEDIGRLLGEIKQKIEAATARESDDKKHKQYLIQLKPYIHEMLSKIQPKLCNPGSVKNF
SIO_010081: DK880_RS02645
subclass of: SO_0000673
so part of: DK880_RS02645
location: 659810..660760
location: region:659810-660760:1
so has part: feature:659810-660760:1:exon

WP_204082243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:659810-660760:1:exon

DK880_RS02650
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02650
old locus tag: DK880_00538
so part of: sequence
location: 660920..661684
location: region:660920-661684:1
so has part: feature:660920-661684:1:exon
subclass of: SO_0000010

position:660920:1
position: 660920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661684:1
position: 661684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660920-661684:1:exon

DK880_RS02650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02650
old locus tag: DK880_00538
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIRNIANNRIGLFLLYFFTLVPACKKHTITLSENSPPLVHKVPAQKAKQSHEDRLDKHKLPLEIAHPDQSEKENNNEKDNEKINCEQKKLPRATPSIGSEEVPQDPSKEKSKSETKVIQKKASNDLEDKLSQEQVHRYKKKVEKLYNKNYNTYASKITRLKLNVLDITEKQSPRKEKHNIKTETKEKVKILQDIQAQATLIQKDLKADLKEIEQEKEVKAQTQEIPKEINEMVKQMQELNRNIFNLLHGINNLL
SIO_010081: DK880_RS02650
subclass of: SO_0000673
so part of: DK880_RS02650
location: 660920..661684
location: region:660920-661684:1
so has part: feature:660920-661684:1:exon

WP_109997276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:660920-661684:1:exon

DK880_RS02655
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02655
old locus tag: DK880_00539
so part of: sequence
location: 661725..662345
location: region:661725-662345:1
so has part: feature:661725-662345:1:exon
subclass of: SO_0000010

position:661725:1
position: 661725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662345:1
position: 662345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:661725-662345:1:exon

DK880_RS02655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02655
old locus tag: DK880_00539
inference: COORDINATES: protein motif:HMM:NF025279.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peroxiredoxin-like family protein
translation: MIGKILTIAALATITYANLPTTYTLGHQEPTLPYLQQGKLYYIDSSENSAAYTAIKAAEIFNASPVVVMAIRRVGCKFCRHEASRLSSLADQLNQRGIRLIGITHEIIDIDAFRPYLKGDIYYDPNKHFFGPKQRWMPLWMGFLRWSTYVNKHQGASIKGNLKGEARLLGAIYLINKDKITFMHLEKHWGDHVDIQAVQKAIEQIN
SIO_010081: DK880_RS02655
subclass of: SO_0000673
so part of: DK880_RS02655
location: 661725..662345
location: region:661725-662345:1
so has part: feature:661725-662345:1:exon

WP_162534135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:661725-662345:1:exon

DK880_RS02660
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02660
old locus tag: DK880_00540
so part of: sequence
location: complement(662575..663858)
location: region:662575-663858:-1
so has part: feature:662575-663858:-1:exon
subclass of: SO_0000010

position:662575:-1
position: 662575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663858:-1
position: 663858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662575-663858:-1:exon

DK880_RS02660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02660
old locus tag: DK880_00540
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRFSREKVWVSVTAEKSAMSLTKQRQSIIIANAVIHFDNALYGYMVPMLAPLFFPEKETTLQLILGYSILITACIAKPLGGFLFCLFTAYVAEKRLLCYILLGASICQLFMGCLPIYSALPWWGSLGLLVARFCMEICAAGEYHIARLYLMQQTDCRQAKLFSARYERATMVGITFASLVATVLIGRNPILFYWRLPFIIAGLITLLNLIFFRWGHSSFLQLDRGMGVRPSFASLWEQLWQGRNAIIPIAVVMGFGYLTYAVPFLFMPKFIPMIATIPYVHMMQHTTLFMLVDIVLLGWVGVVGPKFTPRLLMLGASSMVALSIIPIFMGLQEASMGFVIFARFWLVAWGVIFSCFITVWCKEQTHSTNPYCVVGFATVLGTGLLGKPTAAICWVLYRTYGSPFAPACYIALFASITVVTLVKTGKK
SIO_010081: DK880_RS02660
subclass of: SO_0000673
so part of: DK880_RS02660
location: complement(662575..663858)
location: region:662575-663858:-1
so has part: feature:662575-663858:-1:exon

WP_109997278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:662575-663858:-1:exon

DK880_RS02665
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02665
old locus tag: DK880_00541
so part of: sequence
location: complement(663895..663967)
location: region:663895-663967:-1
so has part: feature:663895-663967:-1:exon
subclass of: SO_0000663

position:663895:-1
position: 663895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663967:-1
position: 663967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663895-663967:-1:exon

DK880_RS02665
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 247481
locus tag: DK880_RS02665
old locus tag: DK880_00541
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(663932..663934),aa:Met,seq:cat)
SIO_010081: DK880_RS02665
subclass of: SO_0000673
so part of: DK880_RS02665
location: complement(663895..663967)
location: region:663895-663967:-1
so has part: feature:663895-663967:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:663895-663967:-1:exon

DK880_RS02670
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: era
locus tag: DK880_RS02670
old locus tag: DK880_00542
so part of: sequence
location: 664391..665296
location: region:664391-665296:1
so has part: feature:664391-665296:1:exon
subclass of: SO_0000010

position:664391:1
position: 664391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665296:1
position: 665296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664391-665296:1:exon

DK880_RS02670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: era
locus tag: DK880_RS02670
old locus tag: DK880_00542
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934329.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTPase Era
translation: MNNYKAGFVAIIGKPNAGKSTLMNLLIREELAITHAKAQTTRHTLYGMSSGTHFQIIYMDTPGIITPAYPLQTAMMEAVNTAYAGADIMLWVVDAKELESNPLPYENKSNKPTLLVLNKIDLLTPTQLDEAKAYWIRHHPAVEIISISASQNKNIDQLTQKIVEWLPYHPPYYQEDFLTDRPERFFAQEIIRKKILDYYHQEIPYSVEVKIHSFKEMEALISIEVVIHVERPSQKGILIGHQGTALKQLGIAAREALEKFFQKKIFLGQRVKVTPNWRKNILLLAQFGYPVKKSELIRNPK
SIO_010081: DK880_RS02670
subclass of: SO_0000673
so part of: DK880_RS02670
location: 664391..665296
location: region:664391-665296:1
so has part: feature:664391-665296:1:exon

WP_109997279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:664391-665296:1:exon

DK880_RS02675
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02675
old locus tag: DK880_00543
so part of: sequence
location: complement(665316..665588)
location: region:665316-665588:-1
so has part: feature:665316-665588:-1:exon
subclass of: SO_0000010

position:665316:-1
position: 665316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665588:-1
position: 665588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:665316-665588:-1:exon

DK880_RS02675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02675
old locus tag: DK880_00543
inference: COORDINATES: protein motif:HMM:NF015069.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SemiSWEET family transporter
translation: MEKNKFNFFYKNYMMVMGPLANLMFYLQAYKIFTTKQATGVAFFAFVWSFIGLSSWLVYGIVLKSKVLIWSNIAGVIGTLLVLVGILLYG
SIO_010081: DK880_RS02675
subclass of: SO_0000673
so part of: DK880_RS02675
location: complement(665316..665588)
location: region:665316-665588:-1
so has part: feature:665316-665588:-1:exon

WP_109997280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:665316-665588:-1:exon

DK880_RS02680
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02680
old locus tag: DK880_00544
so part of: sequence
location: complement(665662..666384)
location: region:665662-666384:-1
so has part: feature:665662-666384:-1:exon
subclass of: SO_0000010

position:665662:-1
position: 665662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666384:-1
position: 666384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:665662-666384:-1:exon

DK880_RS02680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02680
old locus tag: DK880_00544
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTILLFVFYIGRRFVGERLLWIGRVIPLCFGGLLGLSASCSKPEEACEHAPHPIWCYFNNSEDNIPKDKCLITKLGDKVIRFHITAGQSYLNPGSALTHKVNTDNIVEIKLSDTTQENRDDEKNLIIMPHAYGYVTEKDFSNTMRAGITYNFNKKEKNLGLPAVFLQDLEKQGCKDAVVIIGTGFQRMLGVSEELEKKLKEKESKGELTCFIHSSYYAVEEHNTATKAGKKVFTFIHLGP
SIO_010081: DK880_RS02680
subclass of: SO_0000673
so part of: DK880_RS02680
location: complement(665662..666384)
location: region:665662-666384:-1
so has part: feature:665662-666384:-1:exon

WP_109997281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:665662-666384:-1:exon

DK880_RS02685
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02685
old locus tag: DK880_00545
so part of: sequence
location: 666648..666721
location: region:666648-666721:1
so has part: feature:666648-666721:1:exon
subclass of: SO_0000663

position:666648:1
position: 666648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666721:1
position: 666721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666648-666721:1:exon

DK880_RS02685
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 247481
locus tag: DK880_RS02685
old locus tag: DK880_00545
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:666682..666684,aa:Ile,seq:cat)
SIO_010081: DK880_RS02685
subclass of: SO_0000673
so part of: DK880_RS02685
location: 666648..666721
location: region:666648-666721:1
so has part: feature:666648-666721:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:666648-666721:1:exon

DK880_RS02690
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: murI
locus tag: DK880_RS02690
old locus tag: DK880_00546
so part of: sequence
location: 666754..667629
location: region:666754-667629:1
so has part: feature:666754-667629:1:exon
subclass of: SO_0000010

position:666754:1
position: 666754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:667629:1
position: 667629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666754-667629:1:exon

DK880_RS02690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: murI
locus tag: DK880_RS02690
old locus tag: DK880_00546
EC number: 5.1.1.3
inference: COORDINATES: protein motif:HMM:TIGR00067.1
GO function: GO:0008881 - glutamate racemase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate racemase
translation: MLLLNSICRKAAPIAIYDSGVGGLAIAKAVQKILPQESLHYIADTRHLPYGNQTTTSLCSYVAQIVNFCLDKQYKLLVIACNTATTAAGYLNATYFINKAIPIINVVEPVIAALCATTADNPIGLIGTTYTVTHGNYSKRLQEIGKSIIALSTPLLATMVEASFVQQPIDARLLQSYLDPLAHAAIHTLIPACTHYLFLESEIKQIFRTHYHIALNTIDVAGLTALAVKDFLTLHNLLHSSIQPVSHCFMATALTAAFTNATQQLFGQSAITIDLQPYKESVVAMTAPYMP
SIO_010081: DK880_RS02690
subclass of: SO_0000673
so part of: DK880_RS02690
location: 666754..667629
location: region:666754-667629:1
so has part: feature:666754-667629:1:exon

WP_162534136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:666754-667629:1:exon

DK880_RS02695
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: typA
locus tag: DK880_RS02695
old locus tag: DK880_00547
so part of: sequence
location: 667900..669717
location: region:667900-669717:1
so has part: feature:667900-669717:1:exon
subclass of: SO_0000010

position:667900:1
position: 667900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669717:1
position: 669717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:667900-669717:1:exon

DK880_RS02695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: typA
locus tag: DK880_RS02695
old locus tag: DK880_00547
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934544.1
GO function: GO:0005525 - GTP binding [Evidence IEA]
GO process: GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translational GTPase TypA
translation: MQSLRNIAIIAHVDHGKTTLLDNLLKQSGTFKAHQEIAERVMDSNDLERERGITILAKCTSLVWKDVRINIVDTPGHADFGGEVERTLSMVDGVVLLVDAAEGTMPQTKFVLSKALRLGLHPIVVINKVDRLDARIKEVEEEILELFMALEATEAQCNFPVMYASGKSGWASSTLEGARTDLTPLFELMLAQVPVPKITLEADFSMLITAREYDPYVGRILTGRIFTGVLKTQQAVKVLNQKNEWVENARITKIMAFRGMERLPIETAYAGDIVVIAGLQQANVTDTVCAPAVQQALPASPIDPPTLSINFSVNDSPLAGSEGSKVTFSLLRDRLMRELESNVSIQVTESPTKDSFEVAGRGELQLGILIETMRREGFELSISRPRVLIKTETDGSKLEPLEEIQIELDDAFSGAVIESMSLRKAEMRDLRPMGAGRTRIIFIGPSRGLIGYYGTFLTETRGTGIMHRIFHSYGSYRGSIGGRRNGVLVAMGSGEAVAYALFNLADRGKLFIAAGTKVYGGMIVGEHNRNNDLEVNVLKGKQLTNMRAATADAAIRLSPPVVMKLEEAIAYIQDDERVEVTPQSIRLRKAILDPSKRKRMEKTRH
SIO_010081: DK880_RS02695
subclass of: SO_0000673
so part of: DK880_RS02695
location: 667900..669717
location: region:667900-669717:1
so has part: feature:667900-669717:1:exon

WP_109997283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:667900-669717:1:exon

DK880_RS05200
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05200
old locus tag: DK880_00548
so part of: sequence
location: complement(669995..670219)
location: region:669995-670219:-1
so has part: feature:669995-670219:-1:exon
subclass of: SO_0000010

position:669995:-1
position: 669995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670219:-1
position: 670219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:669995-670219:-1:exon

DK880_RS05200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05200
old locus tag: DK880_00548
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKSIATLWCLSILALGGSCRKEKVAPSTNQLEEEFLRKCGMKNEQIKQLNEQLTDEQIKQLNEQLQPYFKNLS
SIO_010081: DK880_RS05200
subclass of: SO_0000673
so part of: DK880_RS05200
location: complement(669995..670219)
location: region:669995-670219:-1
so has part: feature:669995-670219:-1:exon

WP_162534137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:669995-670219:-1:exon

DK880_RS02705
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02705
old locus tag: DK880_00549
so part of: sequence
location: complement(670442..672637)
location: region:670442-672637:-1
so has part: feature:670442-672637:-1:exon
subclass of: SO_0000010

position:670442:-1
position: 670442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672637:-1
position: 672637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:670442-672637:-1:exon

DK880_RS02705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02705
old locus tag: DK880_00549
inference: COORDINATES: protein motif:HMM:NF012700.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQVIRFIPFFILLCCTQVVSVAAADSSSMAVLLADNYLKSFTEKAKEGKGRLVGQKSAKLDTNVTAVALAPREERLLIFNEIFETSKRYQACYPVSRKVLNQYAWNDLHLFCGTTRTPGYHFLSRINRTLTALGECALASLLAAPTADLSVLSKRQQLIAYLGKEIAIGSVLKDQLQVYKKSENHLLSFWTETDPLYTKEYAEYLTRLFYYKDRVAVNKQAGSLQGRKFWLRDVWNIYSNFVFYPLLGVAICEANVVFNSEINHKHAYTDMFPRYVPIWNYFYCNELYKSGTKYAPNLKGNNEFKIVGYIFSTWFTLHSLWQYYKGYRNYKEYAAVLKNLALRMADVQTFFTVAKKVTALIQENPQLKALYGEQLAATRKLLERTQEQSEVGDLLRYLEEMPLRSWSYLGSNAGKLLASYKLFVEHKAAFHDALYELGQLDAFLSIATLMEETRAKGAANAYTFTKLVSPAEATKPHLALAAMWNPMLAPTVAVGNDITLDVGGVQTVVLTGPNAGGKSTFLTGVTYAVLLSQTFGIAAAQSCSLTPFSSINTYIDITDDIAAGKSLFMAEVARFQDHLTKLRQLKRDAFSFSIFDEPFSGTNPTEGAAAEYSVLNSIASYQNTLNIVATHYPIVMLLEKNEPTKGFKNYKVFITKDAGGRINYSYKVIPGASTQAIAIDILEEEGYSSDMLKQARDIIDNPDKYKKSFTENKKSAEKVASKRQNSKPVKK
SIO_010081: DK880_RS02705
subclass of: SO_0000673
so part of: DK880_RS02705
location: complement(670442..672637)
location: region:670442-672637:-1
so has part: feature:670442-672637:-1:exon

WP_109997285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:670442-672637:-1:exon

DK880_RS02710
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02710
old locus tag: DK880_00550
so part of: sequence
location: complement(672942..674744)
location: region:672942-674744:-1
so has part: feature:672942-674744:-1:exon
subclass of: SO_0000010

position:672942:-1
position: 672942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674744:-1
position: 674744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:672942-674744:-1:exon

DK880_RS02710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02710
old locus tag: DK880_00550
inference: COORDINATES: protein motif:HMM:NF012869.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MKRQAFCYFMATFLSIFFGLITYSLVIPLLKVLFNQEELNTLLVDNPLFPKWQMSIDYLKCLFDYFFIQTIISYGKIYALGLLSLLFMVSTILNGFFRYIADIVMAKVRIKVVYRLRLALFRKMLTFPLQRFTDKKQGDLMACITADIQEIDNAVADTLRLCCKEPTQLFCYIALLFYMSFRLSLFTLLWLPVAGWIIAKIIKQLRKWSDRTQQSLGDLMHLIEAMVSSIRIIKIFGAQNYAIQQFKKESRLYARINRSIACKEYMTAPISESLSVAAISIILVYGGYLIFIDKHALSPSTFIAYFIICTQTLIPIKMMARSIGHIQRGLAAGRRALHLLDEKTEWSRPLLGGITYTTFKHAIAFNNVSFAYSTKKAVLANINFTIQRGETVAIVGASGSGKSTLLSLLSGLYQPSNGTITIDNFSITQLSNNTLPRLMGVVTQESILFHDTIYNNIVFNRPGITRSAVIGAAQIACAHPFIMELPQGYDTVIGEQGGKLSGGQKQCICIARAVLGNPPILVLDEATSALDRVSERAVQSGLQSFMQHRTAIIVAHRLSSIYHVDRIIVLDQGKIVEEGTHATLLAQEGIYKRLFHLEQP
SIO_010081: DK880_RS02710
subclass of: SO_0000673
so part of: DK880_RS02710
location: complement(672942..674744)
location: region:672942-674744:-1
so has part: feature:672942-674744:-1:exon

WP_204082244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:672942-674744:-1:exon

DK880_RS02715
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: hemW
locus tag: DK880_RS02715
old locus tag: DK880_00551
so part of: sequence
location: complement(674815..675987)
location: region:674815-675987:-1
so has part: feature:674815-675987:-1:exon
subclass of: SO_0000010

position:674815:-1
position: 674815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675987:-1
position: 675987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:674815-675987:-1:exon

DK880_RS02715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: hemW
locus tag: DK880_RS02715
old locus tag: DK880_00551
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002701440.1
GO function: GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO process: GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: radical SAM family heme chaperone HemW
translation: MFPGPIKTSSGLYIHIPFCKQACHYCNFHFSTKRQLQPEMIACIGQEIYLRRHYLEAVPISSIYFGGGTPSLLAFTEIDHLLTQVFRYCTVATAVEITLEANPDDLTLEKLKGLHQLGINRLSIGVQSFNDKVLQYMHRAHNSVMAQKSIEWARSAQFSNLSIDLIYAIPGTTTEDWQRDLAQAFLLAPEHISAYYLAIEPKTVWEYQRKKGKLLPISEAIAAEQFAWTIETCQQEGYFQYEIANFGRPGKFSRHNINYWCSRPYLGVGPAAHSYKGWYRQANIAQNIKYMQAIQQGHLPYTEERLSVANRVNEYIMTTIRTCWGCDLDWVARQYGVSLLAIRKDYITSIVQEGLAHYVDHKLYLTNRGKRFATKIAGDLFILDTAEANA
SIO_010081: DK880_RS02715
subclass of: SO_0000673
so part of: DK880_RS02715
location: complement(674815..675987)
location: region:674815-675987:-1
so has part: feature:674815-675987:-1:exon

WP_239302539.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:674815-675987:-1:exon

DK880_RS02720
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02720
old locus tag: DK880_00552
so part of: sequence
location: complement(676204..677259)
location: region:676204-677259:-1
so has part: feature:676204-677259:-1:exon
subclass of: SO_0000010

position:676204:-1
position: 676204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:677259:-1
position: 677259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:676204-677259:-1:exon

DK880_RS02720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02720
old locus tag: DK880_00552
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934447.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Mrp/NBP35 family ATP-binding protein
translation: MPNLQAAILQALRSVQDPDLKRDLVSLGMIDQLLIKDHTISFTIILTTPACPLQEILKQECIQAIRTQVTTDFNIAITTTAKVTTGHATASVLLPHVKNIIAIASGKGGVGKSTLTTHLALALVNYGVKVGILDADIFGPSIPTMWGCRGVRPPILEQEGKKYIQPIERYHVKLMSIGFLAEEAVVWRGPMASAALKQLLKETKWGPLDYLLIDLPPGTGDIPLTLVQTVAVTGVVVVTTPQKVALIDAVKAIAMFTKAHIKLPILGLVENMSYFLPTTAQNTIHYIFGKEGGKQLAQQKAIPFLGQIPLLPAICQQGDDGISAVDTLPIFDTIAQKVAQQISIQNAKATF
SIO_010081: DK880_RS02720
subclass of: SO_0000673
so part of: DK880_RS02720
location: complement(676204..677259)
location: region:676204-677259:-1
so has part: feature:676204-677259:-1:exon

WP_109997287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:676204-677259:-1:exon

DK880_RS02725
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02725
old locus tag: DK880_00553
so part of: sequence
location: 677584..678783
location: region:677584-678783:1
so has part: feature:677584-678783:1:exon
subclass of: SO_0000010

position:677584:1
position: 677584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678783:1
position: 678783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:677584-678783:1:exon

DK880_RS02725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02725
old locus tag: DK880_00553
inference: COORDINATES: protein motif:HMM:NF015562.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015556 - C4-dicarboxylate transmembrane transporter activity [Evidence IEA]
GO process: GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anaerobic C4-dicarboxylate transporter family protein
translation: MVIIGWGILLCILLASLYLEGIAVGLLSGLSITLLSFSGYLSPAQPPYTFIFLQAAWIILTATLETAGFFHFLETKFKQTLSLPQPLLWVVCFSLIFITGNLRFIYAIIHNQRYNFFKQLLFTGGRIAYIFSPLSLPGMLLYLVLHTHALSLIDLLYILGVLSIYYLPAIPYSWPIKRYKTCPSNAAATAQAHEVQRAPYIYLLLLLLLCLMEGLLLGTKPTPNGFTACSFIGKVFKLKIAYFYPLIMLSTAAIVALCLTIKPAQILLTDRFKGGIKQFFIFLGLIWLLDSLLYHDKEILLHIGQSFFLGIKEGTPYVYIGYLLSLAVAWLYLLLLDIEIIIWFFIPLCIASLKGIAMHRVAPWSWILLLLSLGSICLVRYWIHCFSRRYTVNCAQKSH
SIO_010081: DK880_RS02725
subclass of: SO_0000673
so part of: DK880_RS02725
location: 677584..678783
location: region:677584-678783:1
so has part: feature:677584-678783:1:exon

WP_109997288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:677584-678783:1:exon

DK880_RS02730
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02730
old locus tag: DK880_00554
so part of: sequence
location: 678844..679134
location: region:678844-679134:1
so has part: feature:678844-679134:1:exon
subclass of: SO_0000010

position:678844:1
position: 678844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679134:1
position: 679134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:678844-679134:1:exon

DK880_RS02730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02730
old locus tag: DK880_00554
inference: COORDINATES: protein motif:HMM:TIGR00103.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0008150 - biological_process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YbaB/EbfC family nucleoid-associated protein
translation: MDITKLFGQMDQFRKKMETLQQQMGQLVLTKEAGAGLVKVTVNGNKQLTAVTIDESLFQTKDKKIIEELIIGATNLALTEIEEKIQTAIQNSTMEA
SIO_010081: DK880_RS02730
subclass of: SO_0000673
so part of: DK880_RS02730
location: 678844..679134
location: region:678844-679134:1
so has part: feature:678844-679134:1:exon

WP_109997289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:678844-679134:1:exon

DK880_RS02735
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02735
old locus tag: DK880_00555
so part of: sequence
location: 679139..680158
location: region:679139-680158:1
so has part: feature:679139-680158:1:exon
subclass of: SO_0000010

position:679139:1
position: 679139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680158:1
position: 680158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:679139-680158:1:exon

DK880_RS02735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02735
old locus tag: DK880_00555
EC number: 2.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009195063.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 2 protein
translation: MQGTASIGHDLAIVVLNYNGMALLKQYLPPLLLYSKGHAVIVVDNASTDGSVAYLRQYFPQVTCIVHATNYGVAEGYNLALKQIKATYYLLLNNDILVTENWLQAPLALMQSDSSIACCQPKILSLLAPTQFDYAGAAGGYIDRHGYPFCRGRLFHKLEEDQGQYNDTRPVFWASGACLCIRAEAFHALNGFDPLFFAHFEEIDLCWRLQLSGWKVYYCGSSSVYHVGGATLAYHNPQKTYFNFRNRALMLYKNERSTLCSTIKRSGLDLLAACYYLFLGKGNHSWAICKAQIDFLKLRKKGNINRSLLPLRHRYKGNSVLDYFIRGKKRFSDLPDNAW
SIO_010081: DK880_RS02735
subclass of: SO_0000673
so part of: DK880_RS02735
location: 679139..680158
location: region:679139-680158:1
so has part: feature:679139-680158:1:exon

WP_109997290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:679139-680158:1:exon

DK880_RS02740
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02740
old locus tag: DK880_00556
so part of: sequence
location: complement(680348..681124)
location: region:680348-681124:-1
so has part: feature:680348-681124:-1:exon
subclass of: SO_0000010

position:680348:-1
position: 680348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681124:-1
position: 681124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:680348-681124:-1:exon

DK880_RS02740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02740
old locus tag: DK880_00556
inference: COORDINATES: protein motif:HMM:NF024957.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane beta-barrel protein
translation: MKRIFLLCVFFVTHAYAQQEEPVQESPFRAGITLGLGAAGIHGEGDPKFDPDEVRKNIKNTYTGPISGKISNLGFAGMVGAYFSYAFSNYISGEIQVNPIVRGIFLHDKEVKTLEGDEATPMIALFSGGLSFPLLGCLHPFGSQNGLKLLAGMALDFLTLRKEFKKAPMGIEKDKARDVDFTNFKDKLRNWDVAFVIGIGYEWRSGWGLGIRHHRGLLGFLKKDGLADELFTGSDITGIKNIKNHHTIITLNYSIIRP
SIO_010081: DK880_RS02740
subclass of: SO_0000673
so part of: DK880_RS02740
location: complement(680348..681124)
location: region:680348-681124:-1
so has part: feature:680348-681124:-1:exon

WP_109997291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:680348-681124:-1:exon

DK880_RS02745
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02745
pseudo: true
so part of: sequence
location: complement(681417..682091)
location: region:681417-682091:-1
so has part: feature:681417-682091:-1:exon
subclass of: SO_0000010

position:681417:-1
position: 681417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682091:-1
position: 682091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:681417-682091:-1:exon

DK880_RS02745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02745
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612391.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: DK880_RS02745
subclass of: SO_0000673
so part of: DK880_RS02745
location: complement(681417..682091)
location: region:681417-682091:-1
so has part: feature:681417-682091:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:681417-682091:-1:exon

DK880_RS02750
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02750
old locus tag: DK880_00557
so part of: sequence
location: complement(682315..683721)
location: region:682315-683721:-1
so has part: feature:682315-683721:-1:exon
subclass of: SO_0000010

position:682315:-1
position: 682315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683721:-1
position: 683721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:682315-683721:-1:exon

DK880_RS02750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02750
old locus tag: DK880_00557
inference: COORDINATES: protein motif:HMM:NF024314.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SH3 domain-containing protein
translation: MKPPILFSAPFRFFPIERYSQVTSQWIDPNQEGYDQPMMDAKVQKRYVEQLWQRLYGSASPWHEAYVKAILQQEAIGSCQEKALVRFSNHDKSEQDKWYGMNFRPYSIEWIKDIRANIPLYELKNPIFQAAHRAITIQNLAVRILPSQDVCFRSTIPGHGYPFDRLQASAVWIGTPLYSIAETKDKIWSLVIMPDFIAWIPSSGFAYAEDAFIQRWKEAAQNQLAAIIQTQTPLVDTKGRCIAQAYVGSVFPVSTREHAKADKLILNVPIANEEGKACSVDVSVSSTQAACIPIQTSRKNFAKIMDTLKERDFGWCGTSFYNDCSAELKSLFLPFGIWLPRHSSDQVEISEKMDRNGATPEERLTYLKDYGDPFLTIVYIGGHVFLYIGHFQYQEMAIAMTYQNIWGMADLSGDSVSIIGKSVFLPLLLNYPEDPNLKNLLQRPFFQITHLKHLSEGHPRLKKPYVVV
SIO_010081: DK880_RS02750
subclass of: SO_0000673
so part of: DK880_RS02750
location: complement(682315..683721)
location: region:682315-683721:-1
so has part: feature:682315-683721:-1:exon

WP_109997292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:682315-683721:-1:exon

DK880_RS02755
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rrf
locus tag: DK880_RS02755
old locus tag: DK880_00558
so part of: sequence
location: complement(684018..684129)
location: region:684018-684129:-1
so has part: feature:684018-684129:-1:exon
subclass of: SO_0000573

position:684018:-1
position: 684018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684129:-1
position: 684129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:684018-684129:-1:exon

DK880_RS02755
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 247481
gene: rrf
locus tag: DK880_RS02755
old locus tag: DK880_00558
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: DK880_RS02755
subclass of: SO_0000673
so part of: DK880_RS02755
location: complement(684018..684129)
location: region:684018-684129:-1
so has part: feature:684018-684129:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:684018-684129:-1:exon

DK880_RS02760
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02760
old locus tag: DK880_00559
so part of: sequence
location: complement(684189..687092)
location: region:684189-687092:-1
so has part: feature:684189-687092:-1:exon
subclass of: SO_0000573

position:684189:-1
position: 684189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687092:-1
position: 687092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:684189-687092:-1:exon

DK880_RS02760
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 247481
locus tag: DK880_RS02760
old locus tag: DK880_00559
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: DK880_RS02760
subclass of: SO_0000673
so part of: DK880_RS02760
location: complement(684189..687092)
location: region:684189-687092:-1
so has part: feature:684189-687092:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:684189-687092:-1:exon

DK880_RS05595
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS05595
so part of: sequence
location: complement(687402..687524)
location: region:687402-687524:-1
so has part: feature:687402-687524:-1:exon
subclass of: SO_0000010

position:687402:-1
position: 687402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687524:-1
position: 687524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:687402-687524:-1:exon

DK880_RS05595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS05595
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVKVVFPLLAAAARTDVAVGIMGRCHNKAYTTPNLHTHQQ
SIO_010081: DK880_RS05595
subclass of: SO_0000673
so part of: DK880_RS05595
location: complement(687402..687524)
location: region:687402-687524:-1
so has part: feature:687402-687524:-1:exon

WP_262494589.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:687402-687524:-1:exon

DK880_RS02765
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: dnaG
locus tag: DK880_RS02765
old locus tag: DK880_00560
so part of: sequence
location: 687587..689527
location: region:687587-689527:1
so has part: feature:687587-689527:1:exon
subclass of: SO_0000010

position:687587:1
position: 687587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689527:1
position: 689527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:687587-689527:1:exon

DK880_RS02765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: dnaG
locus tag: DK880_RS02765
old locus tag: DK880_00560
inference: COORDINATES: protein motif:HMM:TIGR01391.1
GO function: GO:0003896 - DNA primase activity [Evidence IEA]
GO process: GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA primase
translation: MLLSQETIIAVQNRVCIEEVIADFIPLKKKGQNLWACCPFHQEHTPSFAVSPSKGFYKCFGCDAAGDAITFVQQIEHCSFVEAITYLAQKYGIALIPADNNKEERPTAATNEKIYAALNLAKAYFSELLWSHSEAAQVALPYLTQRDISITLAKKFSLGYSLNSWDGFYSFALAQGSNVETLLSAGLISQSDGKIYDRFRGRLLFPIANSNGQVVAFGARALLPTPATDSPKYLNSPETVVYHKRTILYGLTWAKQPVKQANHCYLVEGYTDVLAFHKIGKEAVVALSGTALSEEQIHTLRRLTSKLTLVFDGDQAGKQAAFRNIDPLLSKGFEVNIVPLPATMDPDSYIRTIGAAAFIDYLANAAQDFITFKADMLHTRETSLTPTEEAKNIRAIIQSILAIPDAIEQSIFLKKCSKLFSIDPSILQVTYDALRHLPAKTTVGITQRKKMERPYSVQKTYSDRKHIPFVHKLTASIEAYEQEIMRMLILYGSTTVIEGKALYEYIFLELGDIVFRSEKCQTLLAYYKERLGKGEPIDRQAILAQGDPAMQKRVIDLIACRHEISEAWATKYGIYTVKEVDFLYQATIEVIIRLKLRLVQALIEENRVTLTQACSESQEEELLQIHQMLKATECNLAKRLGIVVAQ
SIO_010081: DK880_RS02765
subclass of: SO_0000673
so part of: DK880_RS02765
location: 687587..689527
location: region:687587-689527:1
so has part: feature:687587-689527:1:exon

WP_109997293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:687587-689527:1:exon

DK880_RS02770
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02770
old locus tag: DK880_00561
so part of: sequence
location: complement(689632..689853)
location: region:689632-689853:-1
so has part: feature:689632-689853:-1:exon
subclass of: SO_0000010

position:689632:-1
position: 689632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689853:-1
position: 689853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:689632-689853:-1:exon

DK880_RS02770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02770
old locus tag: DK880_00561
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSELPALQRLHLKSNKIGNEGIKALTEGFPNFQQLHLYSDDIPCEFAKILAETTQLRVFSNGRIGKEIGKAL
SIO_010081: DK880_RS02770
subclass of: SO_0000673
so part of: DK880_RS02770
location: complement(689632..689853)
location: region:689632-689853:-1
so has part: feature:689632-689853:-1:exon

WP_109997294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:689632-689853:-1:exon

DK880_RS02775
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02775
old locus tag: DK880_00562
so part of: sequence
location: 690190..690993
location: region:690190-690993:1
so has part: feature:690190-690993:1:exon
subclass of: SO_0000010

position:690190:1
position: 690190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:690993:1
position: 690993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:690190-690993:1:exon

DK880_RS02775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02775
old locus tag: DK880_00562
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MALFPLLFAGECEGGKSPRQPSSKDELARNLKDTNGKPASASESKTEASIKSLSQVKTGTEPIAEKDKATKSFIDKWYQDTIEPVVSDFISLLEKHSEKCKKLIEIQLQSETISEEELSNMESEVCAFLLKLEQAQELFDNDIPELAGALIDIDIIDIDIQIDIIKSTSKEFQQRLNDLKRETSRDNNKRTKYISYLLSIQSEFLQSMFNKLLKQQLPTLLTTNLLKVEKEKGLEGLKAEMKSIENDLKEMGNKKFQLTNNLINYLL
SIO_010081: DK880_RS02775
subclass of: SO_0000673
so part of: DK880_RS02775
location: 690190..690993
location: region:690190-690993:1
so has part: feature:690190-690993:1:exon

WP_109997295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:690190-690993:1:exon

DK880_RS02780
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02780
old locus tag: DK880_00563
so part of: sequence
location: complement(690988..691614)
location: region:690988-691614:-1
so has part: feature:690988-691614:-1:exon
subclass of: SO_0000010

position:690988:-1
position: 690988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691614:-1
position: 691614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:690988-691614:-1:exon

DK880_RS02780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02780
old locus tag: DK880_00563
inference: COORDINATES: protein motif:HMM:NF024245.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-hairpin-helix domain-containing protein
translation: MFKAIREQIKRFFYFSTREANGLSCLLLLIFLLVIAPQAWQLYVTIFSAKQAEHSRDVALLESYLCLLHDNASKKVRIDINTATVQQLSAIEGIAEKFAVTLIRYRHKLGGFVSVDQYKEIYGLTDRARVKLRECTMVSATYKPKQLSLNHATFQELVTHPYISFAKAKAMIRYRQQQGKFTTLAELQALPGYHMDWATKIMPYLSLL
SIO_010081: DK880_RS02780
subclass of: SO_0000673
so part of: DK880_RS02780
location: complement(690988..691614)
location: region:690988-691614:-1
so has part: feature:690988-691614:-1:exon

WP_109997296.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:690988-691614:-1:exon

DK880_RS02785
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rnc
locus tag: DK880_RS02785
old locus tag: DK880_00564
so part of: sequence
location: complement(691966..692667)
location: region:691966-692667:-1
so has part: feature:691966-692667:-1:exon
subclass of: SO_0000010

position:691966:-1
position: 691966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:692667:-1
position: 692667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:691966-692667:-1:exon

DK880_RS02785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rnc
locus tag: DK880_RS02785
old locus tag: DK880_00564
EC number: 3.1.26.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012473287.1
GO function: GO:0004525 - ribonuclease III activity [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease III
translation: MWHDSATRQFIATVRAITGGVPLNLALYRIALQHSSLKEGHTSNERLEFLGDALLSSIVATYLFKKFPLKGEGFLTDIRSRLVNRDALNTLARKMHLDKLLQYDEILVHKGNSKYIYGNALEALIGAVYLDHGYAYCEQFVLERLIGNYISLEDLIARDTNFKSQIVEWAHKQRFTVRFKTTLEAAHLFTAQVLIDEKVFGEGKGRTKKCAEQSAAQQALQQVQSFTEENAPQ
SIO_010081: DK880_RS02785
subclass of: SO_0000673
so part of: DK880_RS02785
location: complement(691966..692667)
location: region:691966-692667:-1
so has part: feature:691966-692667:-1:exon

WP_239302502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:691966-692667:-1:exon

DK880_RS02790
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: fabF
locus tag: DK880_RS02790
old locus tag: DK880_00565
so part of: sequence
location: complement(692688..693938)
location: region:692688-693938:-1
so has part: feature:692688-693938:-1:exon
subclass of: SO_0000010

position:692688:-1
position: 692688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693938:-1
position: 693938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:692688-693938:-1:exon

DK880_RS02790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: fabF
locus tag: DK880_RS02790
old locus tag: DK880_00565
EC number: 2.3.1.179
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934579.1
GO function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: beta-ketoacyl-ACP synthase II
translation: MTCPRVVITGLGALTPIGSTVQEYGNALWAGRSGAGLITRFDATPFDTQFACELKAYDPYTYLPAKEVKRMDRFTQYAMIAGAEAVADAALMDPCIDKTAVGVVWGSGVGGLGTTEETVLAAVDRGGSHKVNPFFIPKIIPDIPAGHLSIKYGFKGPNFATVAACASSMNALISGFQLIKLGEAEVVLTGGSEAPIIPIGIGGFNALKALSRRNTDYLTASRPFDKTRDGFVMGEGAAALVLESYAHAKKRDAKIYAEIVGIGMSADAYHITAPDVEGVVLALQRALASAQISPDCIDYINAHGTSTPLGDSNEIKAIQQVFGSHAYQLHISSTKSMTGHLLGAAGAVESVATVLALQHQWVPPTINHRVVDETIDPHINLTLHKAIPKSIVFAQNNAFGFGGHNVSMIFKKWEDA
SIO_010081: DK880_RS02790
subclass of: SO_0000673
so part of: DK880_RS02790
location: complement(692688..693938)
location: region:692688-693938:-1
so has part: feature:692688-693938:-1:exon

WP_109997298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:692688-693938:-1:exon

DK880_RS02795
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
locus tag: DK880_RS02795
old locus tag: DK880_00566
so part of: sequence
location: complement(693957..694220)
location: region:693957-694220:-1
so has part: feature:693957-694220:-1:exon
subclass of: SO_0000010

position:693957:-1
position: 693957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694220:-1
position: 694220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693957-694220:-1:exon

DK880_RS02795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
locus tag: DK880_RS02795
old locus tag: DK880_00566
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934578.1
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl carrier protein
translation: MNSEDIKAKVVAIIVDKLNVSAEEVVPTAHFANDLGADSLDQVELVMEFEKEFDLYIKDEQSTALQTVGSVVEFLERSLNDRKSGAS
SIO_010081: DK880_RS02795
subclass of: SO_0000673
so part of: DK880_RS02795
location: complement(693957..694220)
location: region:693957-694220:-1
so has part: feature:693957-694220:-1:exon

WP_109997299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:693957-694220:-1:exon

DK880_RS02800
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rpsP
locus tag: DK880_RS02800
old locus tag: DK880_00567
so part of: sequence
location: complement(694258..694635)
location: region:694258-694635:-1
so has part: feature:694258-694635:-1:exon
subclass of: SO_0000010

position:694258:-1
position: 694258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694635:-1
position: 694635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694258-694635:-1:exon

DK880_RS02800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rpsP
locus tag: DK880_RS02800
old locus tag: DK880_00567
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012472327.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S16
translation: MGRGERDSLKSSIMAVKIRLAKCGRRHWAEYHIVVADARAPRDGRFIEKLGHYNPHTAPSTVHLNEVRALKWLLQGAQPTDTVRNLFSRQGILLKKHLQVGVGKGAITQEQAEERFTAWQAQVRR
SIO_010081: DK880_RS02800
subclass of: SO_0000673
so part of: DK880_RS02800
location: complement(694258..694635)
location: region:694258-694635:-1
so has part: feature:694258-694635:-1:exon

WP_276527171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:694258-694635:-1:exon

DK880_RS02805
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rpmA
locus tag: DK880_RS02805
old locus tag: DK880_00568
so part of: sequence
location: complement(694772..695026)
location: region:694772-695026:-1
so has part: feature:694772-695026:-1:exon
subclass of: SO_0000010

position:694772:-1
position: 694772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:695026:-1
position: 695026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694772-695026:-1:exon

DK880_RS02805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rpmA
locus tag: DK880_RS02805
old locus tag: DK880_00568
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934576.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L27
translation: MAHKKGAGSSRNGRDSASQRLGIKKYGGEAVGAGNILVRQRGTRYYAGKNVGMGKDHTLFALMQGSVVFKKRKDNRFLVSIAVG
SIO_010081: DK880_RS02805
subclass of: SO_0000673
so part of: DK880_RS02805
location: complement(694772..695026)
location: region:694772-695026:-1
so has part: feature:694772-695026:-1:exon

WP_109997300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:694772-695026:-1:exon

DK880_RS02810
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: rplU
locus tag: DK880_RS02810
old locus tag: DK880_00569
so part of: sequence
location: complement(695036..695350)
location: region:695036-695350:-1
so has part: feature:695036-695350:-1:exon
subclass of: SO_0000010

position:695036:-1
position: 695036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:695350:-1
position: 695350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:695036-695350:-1:exon

DK880_RS02810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 247481
gene: rplU
locus tag: DK880_RS02810
old locus tag: DK880_00569
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934575.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L21
translation: MYAIIEVGGKQFKAFENQQLYIPKLADEVGTSCTLGKVLLLDDAQGNVRMGNPIVEGVTVKAKVLGHDRGDKIIVFKKKRRKGYKVKRGHRQDYTQIIIESILK
SIO_010081: DK880_RS02810
subclass of: SO_0000673
so part of: DK880_RS02810
location: complement(695036..695350)
location: region:695036-695350:-1
so has part: feature:695036-695350:-1:exon

WP_109997301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:695036-695350:-1:exon

DK880_RS02815
type: Gene
subclass of: SO_0000704
RO_0002162: 247481
gene: accC
locus tag: DK880_RS02815
old locus tag: DK880_00570
so part of: sequence
location: complement(695477..696832)
location: region:695477-696832:-1
so has part: feature:695477-696832:-1:exon
subclass of: SO_0000010

position:695477:-1
position: 695477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:696832:-1
position: 696832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:695477-696832:-1:exon