Roseobacter denitrificans strain FDAARGOS_309 plasmid unnamed1, complete sequence.
type: Entry
definition: Roseobacter denitrificans strain FDAARGOS_309 plasmid unnamed1, complete sequence.
sequence version: NZ_CP027406.1
sequence date: 2023-05-04
sequence: sequence
division: CON
label: NZ_CP027406.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN06173322
keyword: RefSeq
source: Roseobacter denitrificans
organism: Roseobacter denitrificans
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Roseobacteraceae; Roseobacter.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP027406.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: CA v. 8.2\nGenome Coverage :: 409.207x\nSequencing Technology :: PacBio; Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/04/2023 04:21:46\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,046\nCDSs (total) :: 4,002\nGenes (coding) :: 3,968\nCDSs (with protein) :: 3,968\nGenes (RNA) :: 44\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 38\nncRNAs :: 3\nPseudo Genes (total) :: 34\nCDSs (without protein) :: 34\nPseudo Genes (ambiguous residues) :: 0 of 34\nPseudo Genes (frameshifted) :: 18 of 34\nPseudo Genes (incomplete) :: 16 of 34\nPseudo Genes (internal stop) :: 10 of 34\nPseudo Genes (multiple problems) :: 9 of 34\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 106464
topology: circular
so has quality: SO_0000988
location: 1..106464
location: region:1-106464:1
RO_0002162: 2434

NZ_CP027406
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN06173322
type: BioSample
SIO_000068: biosample

1
title: FDA dAtabase for Regulatory Grade micrObial Sequences (FDA-ARGOS): Supporting development and validation of Infectious Disease Dx tests
author: Kerrigan, L.
author: Tallon, L.J.
author: Sadzewicz, L.
author: Sengamalay, N.
author: Ott, S.
author: Godinez, A.
author: Nagaraj, S.
author: Vavikolanu, K.
author: Vyas, G.
author: Nadendla, S.
author: Aluvathingal, J.
author: Sichtig, H.
journal: Unpublished

2
title: Direct Submission
author: Kerrigan, L.
author: Tallon, L.J.
author: Sadzewicz, L.
author: Sengamalay, N.
author: Ott, S.
author: Godinez, A.
author: Nagaraj, S.
author: Vavikolanu, K.
author: Vyas, G.
author: Nadendla, S.
author: Aluvathingal, J.
author: Sichtig, H.
journal: Submitted (01-MAR-2018) Center for Devices and Radiological Health, US Food and Drug Administration, 10903 New Hampshire Avenue, Silver Spring, MD 20993-0002, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106464:1
position: 106464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-106464:1:source
so part of: sequence
organism: Roseobacter denitrificans
mol type: genomic DNA
strain: FDAARGOS_309
isolation source: Seaweed, Enteromorpha linza (coastal marine sediments), Aburatsubo Inlet, Australia
culture collection: ATCC:33942D-5
culture collection: FDA:FDAARGOS_309
plasmid: unnamed1
country: USA: VA
collection date: 1978
collected by: ATCC < T Shiba

2434
type: Taxonomy
SIO_000068: taxonomy

CEP88_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
gene: istB
locus tag: CEP88_RS00010
old locus tag: CEP88_00010
so part of: sequence
location: complement(693..1454)
location: region:693-1454:-1
so has part: feature:693-1454:-1:exon
subclass of: SO_0000010

position:693:-1
position: 693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1454:-1
position: 1454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693-1454:-1:exon

CEP88_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
gene: istB
locus tag: CEP88_RS00010
old locus tag: CEP88_00010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009797930.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
translation: MILHSLNLLQISKRNPVNATDPFTEMQQQDGTASLTHAEWLGLLIDREATSRETKRFESRMRTAKLRHVGASPEDVDYKSRRGLDKALFQQMLTGRWIKDKRNLMITGPCGVGKTWLACALAQSACRDGVTVLYKRMPRLFDELELAHGDGRFPRVFKALTKTQLLILDDWGPDRLDASQRRDLMEIVEDRYEVGSTLITSQLPIDAWHDVIGEPTFADAILDRLVHNAYRIELDGQSMRKTKLKTGDESTQN
SIO_010081: CEP88_RS00010
subclass of: SO_0000673
so part of: CEP88_RS00010
location: complement(693..1454)
location: region:693-1454:-1
so has part: feature:693-1454:-1:exon

WP_011655415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:693-1454:-1:exon

CEP88_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00015
old locus tag: CEP88_00015
so part of: sequence
location: 1456..2160
location: region:1456-2160:1
so has part: feature:1456-2160:1:exon
subclass of: SO_0000010

position:1456:1
position: 1456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2160:1
position: 2160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1456-2160:1:exon

CEP88_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00015
old locus tag: CEP88_00015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013300279.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6 family transposase
translation: MQRNPFKHHRFSPDVILCAVRWYCRFSLSCRDVRDLLAERGINVDASTIHRWVRKFGPEIAKRSFKHRSWRGQSWHVDETYIRVGGKWRYLWRAVDQNGQLVDFRLTARRDIKAARAFLKQACENARLYQPRSITTDKAHSYARVIGEMNRFELPGEGVLHINRKWKNNRIESDHAALKKLITPMRGFKSLSSAKATLRGIEAIRTIKNGHVHGKEPGVEGEIRFVSKLFGVAA
SIO_010081: CEP88_RS00015
subclass of: SO_0000673
so part of: CEP88_RS00015
location: 1456..2160
location: region:1456-2160:1
so has part: feature:1456-2160:1:exon

WP_011655414.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1456-2160:1:exon

CEP88_RS20305
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS20305
so part of: sequence
location: complement(3010..10665)
location: region:3010-10665:-1
so has part: feature:3010-10665:-1:exon
subclass of: SO_0000010

position:3010:-1
position: 3010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10665:-1
position: 10665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3010-10665:-1:exon

CEP88_RS20305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS20305
inference: COORDINATES: protein motif:HMM:NF012573.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron-regulated protein frpC
translation: MSQILSVETRADGTKEYTIGVPGARGVMLEYKVVDPFNYDASTNTWNVIDANEFSKSHLDNIYRIGQPFDPEDRITGVLADSTLGNIDTKQNTPTVHFQKQSDLLVDRVGTRINFDDFDIVKHLEAGLYDAQLDVGRAYSLTDLQDLGISPQSINDDGRDYGDHAQGATAYPWAAINGDIYAGGSPDVMYMFGSSRFQISQDTTFTIEQSGSVVVNGKIELQYDDFDFESRNVDSTVNNILKRTQVGGEDGKVNLTYGGEGAVRSYSTTTPSTPDEDTFQEGSFNDPGLSLGARFAAFSKSLTKTSGTDFQIFTGSELSNSLNSIGSPSSALDDFYLKLDASTTGTRFSFGGDIANEVVVVPADFGLSLGTVVDDTAPTEENSYSFGGVQFSLGTEVAVRPNSNIDASLQFFGGAMNHVSPLVLDLDGDGVAADVRHIYDDGTVFFDIDADGFAERVGWVGPDDGQLAMDRNGNGLIDDITELYGDDEMPAFVKLGLHDSDGDGFITNADDDWDDLLVWRDLNQDGVSQADELKSLDHHGITSISYAETSDNRYVKENYISGWSTFVKDGQNREIADVHYLNDNVNTWELGAESQVFGATTELNIEALLLPLSRGYGSLPALHLAMTRDDELRGLVRELDRLPLDELGRAADLTRDILLKWAGVLDNDPDARATGDGSNIDSRLVDFMEIFSGVEWAQRGSTGFVGENASLGIKVAWQGIHATLTARMVAQGPLEKVIGETAYDFATDTLNLTDDLDTIAARAADWSNLLGAEEANAFWILLGDTLVALRDSLGETVEDINLALTNAAGFDLLLGSRALADEGGVLGGLETDTVSDLFENVRVGTHQGDTINGGGGGDAIFGDGGSDIINGMGGDDIIVGGTGSDTLDGGVGDDVIDGGDGVDMITGGEGNDDLDGDAGDDTLIGGAGDDDLGGGAGADILHGGEGKDRLAYGSSNAGVTIDLAAGTGSGGHADGDVFSGFENVQGSEHNDIIRGDAGTNLLNGENGNDILEGRDGDDVLFGATGDDTLRGGNGDDILSALQGREHFDGGAGQDLVSYKHGFLSTGVHVDLSQGRGFAGEAHDDTYTGVENVTGSRHNDILIGDGSANYIRDGGGHANDVLRGGGGVDWLITTGGFDRLWGDGGGDRFRIQREDGDGVAPGPRAVVVVDFDGSEGDLIDLRDLPISTLVLQRMGNDTYADLGGGRALVIRDVNPGALNASHFAFPDGASMQVGPVKTNVPAFLLEPDVETPYAAPARFIDGNPGANTLAGDGGDDTLLGRAGDDRLIGNGGADRLDGGAGIDTVDYLSSWAGVNIDLALGTGSGGDAEGDVLVSIEHAVGSHYDDVIAGNSADNRLNGLSGSDTLIGNDGSDTLIGGDGDDDLRGGNGDDLLVGGSGADSFDGGAGTDQALYNNAASSITLDLENAHRNRGEAEGDVFTNVELFVASNHDDRLYGNAAGNQLYGLEGDDVLEGRGGTDTLVGGSGNDTLRGGSEDDYLFGGKGADILDGGSGANDFAQYSAAISSIVASLRDASVNRGEATGDTFFGIEHLAGSAHDDELYGNNKTNVLNGGDGNDILDGGAGQDHYTGGLGADTFVHDGGRNQDVIYDFNPSQGDRISFFGSSDVTSLTDLKSNHLLQQGSNLFVVVGSKAIFQINNANASYLTSTSVTFTALAGLNFTDTFEGSDGADHLIGSAYGDILLGFDGTDILEGKAGDDILEGGAGVDTLEGGAGNDTLDAGEGVDSVGLSQAQQLRGGTGDDIYLIGANAGDVLVDAAGEDQNGGNDRVEFTDVSLANAKISTFASDNSADGDMLAISWQQNGLSGTAYFAQSGSYIEAYEFADGLTLTSDAFTSTGVSRTGASSDDTVGGSAGDDVLNGEAGNDTLDGNTGDDLLLGAGGEDTLNGGEGRDQIFGGIGNDLVNGGLGNDTLNGGEGNDTIFGDEGNDIIFGGDGDDTINSGSGNDNVDAGDGADIVEGGLGNDLLNGGTGIDTLLGGAGN…
SIO_010081: CEP88_RS20305
subclass of: SO_0000673
so part of: CEP88_RS20305
location: complement(3010..10665)
location: region:3010-10665:-1
so has part: feature:3010-10665:-1:exon

WP_143090278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3010-10665:-1:exon

CEP88_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00025
old locus tag: CEP88_00025
so part of: sequence
location: complement(10670..11266)
location: region:10670-11266:-1
so has part: feature:10670-11266:-1:exon
subclass of: SO_0000010

position:10670:-1
position: 10670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11266:-1
position: 11266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10670-11266:-1:exon

CEP88_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00025
old locus tag: CEP88_00025
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMSNVKRTLLFGSIILALVMFAKSQIDPHLQRSYLLSSIPDDVKVLEEVAFLDGGHCIYAEFSVVGPAAPPNFHRKERLRNYGSSPSYDNLKAQLQVNEWRSGTIKNTSISNALISLGSNGQRIFEKCMLVKGDFSDRTVLTVEDRLKRRNFSRVISDEITLIQSREWVLFYGYGLWAYYDGPEARLIYIGQPLGWWG
SIO_010081: CEP88_RS00025
subclass of: SO_0000673
so part of: CEP88_RS00025
location: complement(10670..11266)
location: region:10670-11266:-1
so has part: feature:10670-11266:-1:exon

WP_105880229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10670-11266:-1:exon

CEP88_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00030
old locus tag: CEP88_00030
so part of: sequence
location: complement(11256..11696)
location: region:11256-11696:-1
so has part: feature:11256-11696:-1:exon
subclass of: SO_0000010

position:11256:-1
position: 11256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11696:-1
position: 11696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11256-11696:-1:exon

CEP88_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00030
old locus tag: CEP88_00030
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLLYAIIFLTVLIAVLFFADKYGTRMATSYLTADNSPIYDRADPRDIDWEAPDPQACEFARLWGIFPYQTCYYRVPSPVDPNEDVFGFLLTAPPRFFSPPFDLVSGRTPESYRFILPVQTEVRFVFFPDGTFIERRKRDDRTNDV
SIO_010081: CEP88_RS00030
subclass of: SO_0000673
so part of: CEP88_RS00030
location: complement(11256..11696)
location: region:11256-11696:-1
so has part: feature:11256-11696:-1:exon

WP_044033574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11256-11696:-1:exon

CEP88_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00040
old locus tag: CEP88_00040
so part of: sequence
location: 12438..13055
location: region:12438-13055:1
so has part: feature:12438-13055:1:exon
subclass of: SO_0000010

position:12438:1
position: 12438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13055:1
position: 13055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12438-13055:1:exon

CEP88_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00040
old locus tag: CEP88_00040
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRLTESRQDVDDTLRQPIGGLQNSFIIQRPDPIDYYGGMLAVYMFHFLISKCIGQIETINDFPTSVFGKFAEYPVTFSRLPDDRAKGWDGLRIYTIEVIIWLSLGGFSTDRDGNELSPVEKSTVLFDQVEFWFKALEKLATTDQTYRNWDQLHAVHNPIYGNSDKVNTGLFGSVDPEQWIGTTDAYLKGSQIRHKLLDMMTSLG
SIO_010081: CEP88_RS00040
subclass of: SO_0000673
so part of: CEP88_RS00040
location: 12438..13055
location: region:12438-13055:1
so has part: feature:12438-13055:1:exon

WP_011655408.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12438-13055:1:exon

CEP88_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00045
old locus tag: CEP88_00045
so part of: sequence
location: 13176..14084
location: region:13176-14084:1
so has part: feature:13176-14084:1:exon
subclass of: SO_0000010

position:13176:1
position: 13176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14084:1
position: 14084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13176-14084:1:exon

CEP88_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00045
old locus tag: CEP88_00045
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MPHLDHTAFVTACRDERGVGNHTLRAYAQDLRTFARFTKEYHLADPLSKDDILAYHSHLRDELHAKPASIERRLVTLKSYFAWRADRNSALPSPFADVRISVRIPRRLPRPVDRETLKAVLQSETGPTGAQPADQEVTILMIKLLIVTGLRISELTTLKICDVTADASQMIVRGKGNKERMVFVPNAELQEMFRRYCADRVRHDSLKSPLFLNAVGRRLRSQTFRKRLRVLSHRLGITPHLTPHRFRHSAATLLIEEGTDIRMVQALLGHASLRTTEIYVRVSNHALRRALERADILDVLRH
SIO_010081: CEP88_RS00045
subclass of: SO_0000673
so part of: CEP88_RS00045
location: 13176..14084
location: region:13176-14084:1
so has part: feature:13176-14084:1:exon

WP_011655407.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13176-14084:1:exon

CEP88_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00050
old locus tag: CEP88_00050
so part of: sequence
location: 14353..16677
location: region:14353-16677:1
so has part: feature:14353-16677:1:exon
subclass of: SO_0000010

position:14353:1
position: 14353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16677:1
position: 16677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14353-16677:1:exon

CEP88_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00050
old locus tag: CEP88_00050
inference: COORDINATES: protein motif:HMM:NF024565.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MNTAPKPKFSVSARHLGPVLTLDGELTKNNQNLVFARNGIGKSFLSRAFRYLDLHGQQEDVSGAAFNLVSDESADHSGSFAISRGTTAMGTLDLQKAGDKVTATVNDTIFHVFSEDFVQEELRERKYELDGEIENQIAVDSENIKLVDANKALEEARQKAFEAYNALEGKFTTAKEAELHEKAGINKQLREYKALSLEKLLETIQEKPEDPEQSLAEIIKDLDSLKAIPAEPVYPGQVEAVGTNDIDLDALAASLECLTSPSSVSDAIKKKIDAHHGFYEEGAKIVRDEHRTECPFCEQGIAEPNPKAIIDAYIEYFEDEEEKHKAELRDFFRKLKQMETQLDQTETQLARQKSRYDNLKRHVPSKKDTEVGDAANELKNVREAISALKSVIEQKAAALGTASALPAENLPACVTAINAVINENNDKAQALTSAVEKADEERRTLQRKACTVFEREFTIGNWPDIETVRGLQADAVSKHGDVIQLEKASPSAQARDRVAETFELLLREFFAEKYIFDKTSFVLKRGEREMARGPHRTLSDGEKTAIAFCYFIACAHKKVATGSDYKELFLVFDDPVTSMSYDFVFAIAQTLKNLNISDQGEISINPGKIDGTTCWRPELLLLTHSSYFFNISLTNRVVDDNAAFALHTDGKSHNLARLNKYIAPFQEQLIDIYEVANGKDPDHRTANSIRSVLEAIGRFCRPDKSDSLTDFVKHLAGEEGMTLKSVLINSLCHGTYYDETPPPDDLVLACKETLVVVEHYAVGQLELVKKAAKA
SIO_010081: CEP88_RS00050
subclass of: SO_0000673
so part of: CEP88_RS00050
location: 14353..16677
location: region:14353-16677:1
so has part: feature:14353-16677:1:exon

WP_083400223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14353-16677:1:exon

CEP88_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00055
old locus tag: CEP88_00055
so part of: sequence
location: complement(16968..17258)
location: region:16968-17258:-1
so has part: feature:16968-17258:-1:exon
subclass of: SO_0000010

position:16968:-1
position: 16968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17258:-1
position: 17258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16968-17258:-1:exon

CEP88_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00055
old locus tag: CEP88_00055
inference: COORDINATES: protein motif:HMM:NF024787.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HNH endonuclease domain-containing protein
translation: MPYSTNPKAQHVWNKARPVKGKNPNLYRRDAQGNVIYKPAYNRDSAMGWQVDHVWPRSKGGSDARKNLQALQTGANKRKSNKTPRLTKVSSRRRQW
SIO_010081: CEP88_RS00055
subclass of: SO_0000673
so part of: CEP88_RS00055
location: complement(16968..17258)
location: region:16968-17258:-1
so has part: feature:16968-17258:-1:exon

WP_011655404.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16968-17258:-1:exon

CEP88_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00060
old locus tag: CEP88_00060
so part of: sequence
location: complement(17274..20333)
location: region:17274-20333:-1
so has part: feature:17274-20333:-1:exon
subclass of: SO_0000010

position:17274:-1
position: 17274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20333:-1
position: 20333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17274-20333:-1:exon

CEP88_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00060
old locus tag: CEP88_00060
inference: COORDINATES: protein motif:HMM:NF024867.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MRPIRLTMTAFGPYAGTEVVEFTAALDAGIFGIYGETGAGKTTIFDGISFALFGQSSGAERSAEDMVCHHAHATDITKVELVFDLGDERYVVQRVPKQQRAALRGSGTTTEPHQAYLFRSTGMPLAEIAGDNLGDIVAEKQVNRVDPEIEALLGYNAAQFRQIVLLPQGDFRKILTAPSDERSPILKRLFDVQLYERFADRIKRDAADIYRQINDERVRRDTHLGDLSEEQLADEIRSMGEEVSALETTVKAETETLVQCQKALSAGEGLAEKFEARGAAETEKATLESASEAVEETKSRLAKARAAQTVLVAESAMRAAGEEAGAAQTRHATAKVSLSSAQSALSVAQEALNRTEQQKDNRDAAHARVLELQRFEQTLGQSHTLLADLEAARSKTKAAVAEQATAERNRTNAEQSLTTLRNLQKEHPAHVRALQEVGNVLAAVEHEAEALGRFETAKSRRDLQAGEVDRLQTEYERRSTHLEVCKNALERAEQDLTEIQALHVARKLLPGEPCPACGSLDHPNPATGDPERRGRHDQFEQASREFRSAERDEIEAKTALAAARASLTERQTELDALDRPERDRKSFDPVLAEARDRRIALEADARFVDLESKIAMAETAAGETTSHHERARQDVSEARDAETRAQTSYDTLLRDVPENWRQGGALASALSAAVSARGELVAAHETATNGEKAAAVALSAAEQGVTSAVAEVDRTAQAFTKAQAEFTERLGTAGLDEAGFKVAKADVAQSDALEEQINSFNERVAANKAQLARLANEISNRSPPDVEALTAAKESAQTKLETSQQTHIRLQRDLEAKFETQRKVAALSIRIAALEAEYGPVGGLADLVNGNNERKVRLPDFAIAAMFDEVLVAANQRLGPMTGGRYQLLRPEDAVGGRQKRGLDIAVFDANTEKSRPTKTLSGGEGFQASLALALGLSDVVQQNSGGIKLDAIFIDEGFGTLDEDTLNTALETLYELTNDKRSVGLISHTEQVKSMITDGFDIEVTPSGSHIHTRRSAA
SIO_010081: CEP88_RS00060
subclass of: SO_0000673
so part of: CEP88_RS00060
location: complement(17274..20333)
location: region:17274-20333:-1
so has part: feature:17274-20333:-1:exon

WP_011655403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17274-20333:-1:exon

CEP88_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00065
old locus tag: CEP88_00065
so part of: sequence
location: complement(20330..21475)
location: region:20330-21475:-1
so has part: feature:20330-21475:-1:exon
subclass of: SO_0000010

position:20330:-1
position: 20330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21475:-1
position: 21475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20330-21475:-1:exon

CEP88_RS00065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00065
old locus tag: CEP88_00065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015917261.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exonuclease SbcCD subunit D
translation: MRVLHTADWHLGKTLRGVSLHEDQAHVLDQVFKAVVEEGVEVLLIAGDVYDKASPSEAAMKLYSDFLERVHEQTDAAIVVIAGNHDSGQRLGTASKLFDRRRILVRGPIERDETPLILEDEHGKIAISALPYGEIYSARRAFEAEDIRSPEDVLRAQIEAARARVPDDARWVVVAHAFVTNCQPTETERRLSVGTVETVSAAIFEGANYVALGHLHRPQTAGGNAIRYSGSPLAFGFDEAGTTKSMTVFDLDGQGQVVNLKTVDFEPLRQVREVRGLLEDLVSEAKANPSDDYIRAILLDDGALIEPAAQLRPHYPNILQTLREKKQDLVMSSAGRAQSKLDDPVGVIGEFLTYVRGEGATEREEGVVKGVLDRPVLEDAK
SIO_010081: CEP88_RS00065
subclass of: SO_0000673
so part of: CEP88_RS00065
location: complement(20330..21475)
location: region:20330-21475:-1
so has part: feature:20330-21475:-1:exon

WP_011655402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20330-21475:-1:exon

CEP88_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00070
old locus tag: CEP88_00070
so part of: sequence
location: 21548..22366
location: region:21548-22366:1
so has part: feature:21548-22366:1:exon
subclass of: SO_0000010

position:21548:1
position: 21548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22366:1
position: 22366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21548-22366:1:exon

CEP88_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00070
old locus tag: CEP88_00070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006938682.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: WYL domain-containing protein
translation: MAFDDLKHAQKQRLEYLDRLLFWDGAATRGSLIERFGISNPQAALDFKTYLHASETNALKYDASSKKYHTTERFTRLTGRATTDELEELLSGKKRAFYDVLPDLQRTQNVRVFRPLYRALLAGEAIKIVYQSMRDPEPETRWIAPLRFASDGVRLHLRAWCYTRQGFRDFIPSRIDPTQSFAERRNAEDVPWDDDWYTWAVLQLRPHRDLTQDQKRVVRIEFGFEDECLEIRVRKPLEFYTKRRWGLDQENPRLECVGCNYVPISEEEIDES
SIO_010081: CEP88_RS00070
subclass of: SO_0000673
so part of: CEP88_RS00070
location: 21548..22366
location: region:21548-22366:1
so has part: feature:21548-22366:1:exon

WP_011655401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21548-22366:1:exon

CEP88_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00080
old locus tag: CEP88_00080
so part of: sequence
location: 22652..23887
location: region:22652-23887:1
so has part: feature:22652-23887:1:exon
subclass of: SO_0000010

position:22652:1
position: 22652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23887:1
position: 23887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22652-23887:1:exon

CEP88_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00080
old locus tag: CEP88_00080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015460439.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyltransferase
translation: MTVTITKQAEKYLEALAKALEIPHSRYEQAEKSYKSLGDWLHRDDSGVKNFDPDVFVQGSFRLGTVIKPQSDEEEYDVDCACALNALGKSNISQFALKELLGEEIKLYRKNKGIKKEVHEGRRCWRLEYADGAQFHMDIVPCIPNAADQRLLLEARNLDARFADTAIAITDNEVPQYYEITEDWPRSNPRGYAEWFKSRMGDVFIRRREQVFNEMRSEGVTASVEDIPTYRVRTPLQSAIMILKRHRDTVFADDPTDKPISIIISSLAAHTYEGEKTIGYALLSILSRMEQAIEHDGVRYIIKNPTDALENFADKWEEYPERAQAFFGWLEQAREDFSSAGRLVEYRRMSSVLANRMGRDITDQASDAALQPSHPGGSSLLGAAAAASSSSAPSVSFADTPRTPKKPDGFA
SIO_010081: CEP88_RS00080
subclass of: SO_0000673
so part of: CEP88_RS00080
location: 22652..23887
location: region:22652-23887:1
so has part: feature:22652-23887:1:exon

WP_011655399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22652-23887:1:exon

CEP88_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00085
old locus tag: CEP88_00085
so part of: sequence
location: 23884..25629
location: region:23884-25629:1
so has part: feature:23884-25629:1:exon
subclass of: SO_0000010

position:23884:1
position: 23884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25629:1
position: 25629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23884-25629:1:exon

CEP88_RS00085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00085
old locus tag: CEP88_00085
inference: COORDINATES: protein motif:HMM:NF013094.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ThiF family adenylyltransferase
translation: MIWWLSRNTRLSSEKAALADLEGSVDWLQVGKWQANPELAMCVDLKIEHRGEEFGFEMRYPSIFPDAPPMIFTNDQSRISLHQYGPDGELCLEHRPDNWRPAITGADMVASSHRLIAEEQFEGGDTVHARSAHIASLGRDLRSKFCRLLMTESDVKAINGLPEYIGEAVSLSERKAASTFISSINHIGSKDDPLWTSDLVLPKADREELGTAVRVPGSGACGKTSADDLRSVLEGVKLQDLASELFDTDATTHLLMGNKDKWELFWLYGEAKARKVISYSMVIVPPERQRLPTGFDDLANKKVGIVGCGSVGSKIAASLCRTGVGKFLLIDEDIFFPGNVVRNELELNETGAHKSHALRDRLKNLAPNADVTALRMTLGGQESAESMTGALEALGDCDLLIDATASPKAFNMIASIATRQKKPMVWAEVFAGGIGGVVARARPDLDPVPLAARGQIEVWCNDQGVDWIRPESAGQYNGQGDDGAPLIADDAEVTIIASHATRLVTDILARPDSGIFPMSAYVIGLSSEWLFEQPFDTRPIDLKPDGQWGETSDALEPEELLEILKEHWPPKESDDATAAAK
SIO_010081: CEP88_RS00085
subclass of: SO_0000673
so part of: CEP88_RS00085
location: 23884..25629
location: region:23884-25629:1
so has part: feature:23884-25629:1:exon

WP_011655398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23884-25629:1:exon

CEP88_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00090
old locus tag: CEP88_00090
so part of: sequence
location: 25604..26095
location: region:25604-26095:1
so has part: feature:25604-26095:1:exon
subclass of: SO_0000010

position:25604:1
position: 25604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26095:1
position: 26095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25604-26095:1:exon

CEP88_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00090
old locus tag: CEP88_00090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014853023.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Mov34/MPN/PAD-1 family protein
translation: MMQLLLPSDVVRKMRKHMFRAQRREIGGMIMGEQIADQQFRILDFSVDATSGTRSKFVRDAEQHDLVLKEFFERTGKEYHRFNYLGEWHTHPGFSVDPSLQDIYAMQDLVDGTGGVDFAVLLISRLRWFWQYDCSASLFLRDHQPVRVNIKREDPNAKTEGEL
SIO_010081: CEP88_RS00090
subclass of: SO_0000673
so part of: CEP88_RS00090
location: 25604..26095
location: region:25604-26095:1
so has part: feature:25604-26095:1:exon

WP_216290048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25604-26095:1:exon

CEP88_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00095
old locus tag: CEP88_00095
so part of: sequence
location: 26097..27215
location: region:26097-27215:1
so has part: feature:26097-27215:1:exon
subclass of: SO_0000010

position:26097:1
position: 26097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27215:1
position: 27215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26097-27215:1:exon

CEP88_RS00095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00095
old locus tag: CEP88_00095
inference: COORDINATES: protein motif:HMM:NF033611.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SAVED domain-containing protein
translation: MLKRLFESFATKAIDWWFRVSAIERFLITTAVALLIAIFGGVPLIAELLRIAIGAVPEGYLNAQGKIDAVAGWILGIGFLMIVVGLGLAIARFAGDAKSRSKKRIVVIEGRGLRDDDGAPLEGTVGKQVEGQVVPVLLDLRRRMDGKVIEPERALDDIAAANRSVLQHRRDIDRNDLTVVYGGLTSVPYTFLTGVLLDDEGDIKTYDWDRTQEAWRDLEGDDDGLSLAIDGIDALSNSTDAVLAIAFSYPIDDNDLQSTFPHPVVRLTLDGMSSDVHWSQAKQNRLAQEFLEVVKRLSAAGVKRIHLVMAAPNSAVFNFGRRYDKRNLPEVAVYQFERGKKPAYPWAVLMPVAGIDRPEIFYQSGNGGGDAG
SIO_010081: CEP88_RS00095
subclass of: SO_0000673
so part of: CEP88_RS00095
location: 26097..27215
location: region:26097-27215:1
so has part: feature:26097-27215:1:exon

WP_011655396.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26097-27215:1:exon

CEP88_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00100
old locus tag: CEP88_00100
so part of: sequence
location: 27205..27759
location: region:27205-27759:1
so has part: feature:27205-27759:1:exon
subclass of: SO_0000010

position:27205:1
position: 27205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27759:1
position: 27759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27205-27759:1:exon

CEP88_RS00100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00100
old locus tag: CEP88_00100
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQVDYSDMKQGALEARTRAAQFEKQWMTWLTLASAGGLALLLSFSTGMAHPNHTLLMLLPAYFAFLLGMAAAGLSFATKLREELAQSSHSASAFNREEYRTAAGALPTVIASPPRLADEANQDKDAIVAKCNAAHDLAEEAWKSRVRWLWLTRILLATSVSAFIFGVAWPGLFVFFGGDLVGGS
SIO_010081: CEP88_RS00100
subclass of: SO_0000673
so part of: CEP88_RS00100
location: 27205..27759
location: region:27205-27759:1
so has part: feature:27205-27759:1:exon

WP_143090276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27205-27759:1:exon

CEP88_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00105
old locus tag: CEP88_00105
so part of: sequence
location: complement(27898..30078)
location: region:27898-30078:-1
so has part: feature:27898-30078:-1:exon
subclass of: SO_0000010

position:27898:-1
position: 27898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30078:-1
position: 30078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27898-30078:-1:exon

CEP88_RS00105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00105
old locus tag: CEP88_00105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020039660.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
translation: MSSAFDQLARPVQKWIRQQGWRELRDIQARAIRTICESDNDLIVAASTAGGKTEAAFFPLISQVLDAPAEGGGFDVLYIGPLKALITDQAGRLEGICQEAGLPVVPWHGDVSQSVKTRAMKNPKGILLITPESLEALFVRRGLEVARLFGATRAVVIDELHTVLDSERGVQLRSLLTRLELAIKRPIRRIGLSATLGDMDLARAYLRPDNAEKVTLIEAEGGEAELKLQLRGYLSGGEDDNTPSATDAVAAHLFEHLRGSDNLVFAGARQRVEIYADRLRNLCEQEHLPQEFYPHHASLSRDHRSFVERRLKDSSKPTTAVCTSTLELGIDIGDVTCVAQIGAPFTVAALRQRLGRSGRREGQPAILRQYAVETRLTSDSSFVDRLRLGLIRSIAMIDLLLEGWCEPPKSQALHLSTLVHQILSVIAQRGGAPANILYSVLCREGPFRQVTVAMFTDVLRALGHPEIALIEQTEGGLLLLGQNGERLVEHYSFYAVFKTPEEYRLVSNGRDLGTLPIDNILSPGMMLIFSGRRWLVQEIHDREKVIMVKPAKAGVPPVFGGDPGDIHDKVIARMFDVFDADTKPLYMDANSLEMLEEARLNYAQMGFTDVSLVNLGEETSIIATRVGTIKTTTLALALRGFGFSVEQYDGFLQVEAGDETPPLPEVLKRIGEGEVVDLFAGAGNLLTEKFHPYLTRELLELDAVSSRLAPKKLAAVVGEFRFSTLR
SIO_010081: CEP88_RS00105
subclass of: SO_0000673
so part of: CEP88_RS00105
location: complement(27898..30078)
location: region:27898-30078:-1
so has part: feature:27898-30078:-1:exon

WP_011655394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27898-30078:-1:exon

CEP88_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00110
old locus tag: CEP88_00110
so part of: sequence
location: complement(30081..31388)
location: region:30081-31388:-1
so has part: feature:30081-31388:-1:exon
subclass of: SO_0000010

position:30081:-1
position: 30081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31388:-1
position: 31388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30081-31388:-1:exon

CEP88_RS00110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00110
old locus tag: CEP88_00110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007011034.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MSKLKPRERDAIVQALRAGVVPKLGLRHIQVGRVREIEELVKDMERIADGGSAIRFVIGEYGSGKTFFMNLIRLVALEKGLVVMFADLAPDRRIHATGGQARGLYAEMARNLSTRTKPDGGALASVVERFVSQAHRDAEAKDVPTGTIIRERLGHFEELTGGFEFAEVIRRYWEGHENGDDELKSAALRWLRGEFATRTDARKALGVRTIIDDASVYDHLKLMSAFVCEAGYKGLLVGLDEMVNLFKLTSSQARNANYEQILRILNDVLQGSAENLGFLMGGTPEFLMNTRRGLYSYEALQSRLAENTFARDGLVDLSGPIVRLASLAPEDLFVLLANVRRVMQDDETALPDTALEAFMNHCSDRIGEAYFRTPRNTVTAFVNLLSVLEQNPGVEWSDLIEKIDVSEDRGDDMSDVEETTGAQPGGDDDLISFKL
SIO_010081: CEP88_RS00110
subclass of: SO_0000673
so part of: CEP88_RS00110
location: complement(30081..31388)
location: region:30081-31388:-1
so has part: feature:30081-31388:-1:exon

WP_011655393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30081-31388:-1:exon

CEP88_RS00115
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00115
old locus tag: CEP88_00115
so part of: sequence
location: complement(31366..33912)
location: region:31366-33912:-1
so has part: feature:31366-33912:-1:exon
subclass of: SO_0000010

position:31366:-1
position: 31366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33912:-1
position: 33912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31366-33912:-1:exon

CEP88_RS00115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00115
old locus tag: CEP88_00115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011338080.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TerB N-terminal domain-containing protein
translation: MSSILKFFRVAFFYALYFLMCMIAVVTVLQGWPVGGQMLFAFGLPIVLVWWQEKKRSRKVQAKALAVASENTRVTQSEPVARVSAQEKRIERERERTRKANAVQSSSKAPPKPPKQDYAEIMRAGQSAAPALSAIAKRYENARPSSWKPQSNSRKNGWIPAADTATVAGRDIGGMVYVGTPPLLNHHGYRDKCRAYIDPSLSVARTGGDRAGEGMSYWPGYSDISARSRATYLEWLASGRTDPSYDPGYMFLYFYGLERRFFVDQSNADAKDIITEVRRLISLYPENHSVKRYLGEFLDIATLAETEFEALEPTFERQGWELPFSLKYAIGARLDKGENLTADWVLSWLMCHPESHLRTPATRCRDEFLALFKIRFDDRFPIGLKVSKPRKHLKATYRAASSEFEGTLNPTADGKPVPDISGLRKPVEIAQEVADEVIDDLDKLSRYLGRNPEGRGSIEAHALLPIDLWSLFPSTEMEALKEWARGIMQSGGLVPLADVIEKLEGQRSAKIGKRQLTGAADALARLGFGLAPDPRFALRSPKPEEPVVLFDLDGQIEKLEDVSASYQTVLMELALASFVAHADGRIADAERKALETQIASVEGLSEQERYRLQANMVWFLAVPPDMTLLRRKLKDVGVEDQTAMRAALVGAAHADGVIQSEEVASIEKVYKALGLDPALAYSDLHAGEIADAPRTVRAAQPGNSGEAIPKLQKAAGPVLDASRIAAIRSDTARVSSVLGQIFDAEEETEEGRDSKGATLFTGLDAKHGALLLDLVGQEHWTEDSFEQLCGQHGLMPSGALEAVNEWAFETHDEALLDEYDGYDVSPEIADAVKQKLEGEGRHVQIEAT
SIO_010081: CEP88_RS00115
subclass of: SO_0000673
so part of: CEP88_RS00115
location: complement(31366..33912)
location: region:31366-33912:-1
so has part: feature:31366-33912:-1:exon

WP_011655392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31366-33912:-1:exon

CEP88_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00120
old locus tag: CEP88_00120
so part of: sequence
location: complement(34067..34447)
location: region:34067-34447:-1
so has part: feature:34067-34447:-1:exon
subclass of: SO_0000010

position:34067:-1
position: 34067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34447:-1
position: 34447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34067-34447:-1:exon

CEP88_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00120
old locus tag: CEP88_00120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013301526.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5615 family PIN-like protein
translation: MRLFLDECLSPRVANELMAEEGYYVVHPRNQGGLGEADHTVLARCIENNLIVVTENARDFRALAARADIHPGMIILPCLGRVQAKALIGAAIAHLGTLGDPSDVMVNKVLEAEADGTLTLYDLPEE
SIO_010081: CEP88_RS00120
subclass of: SO_0000673
so part of: CEP88_RS00120
location: complement(34067..34447)
location: region:34067-34447:-1
so has part: feature:34067-34447:-1:exon

WP_044033566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34067-34447:-1:exon

CEP88_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00125
old locus tag: CEP88_00125
so part of: sequence
location: complement(34457..35056)
location: region:34457-35056:-1
so has part: feature:34457-35056:-1:exon
subclass of: SO_0000010

position:34457:-1
position: 34457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35056:-1
position: 35056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34457-35056:-1:exon

CEP88_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00125
old locus tag: CEP88_00125
inference: COORDINATES: protein motif:HMM:NF016167.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF433 domain-containing protein
translation: MAMRVSADLTIKEAAHLSGVAARRIEKDCEEGIVPRRKTKLWMRETLAAHVPMHAVAYARAMHSLDGIKMEKKSKQRVWRFLRSSKKAKFGSLELSPGLMLNLDPLVSEVWGRTRVYLETRREHLVVDPEIFGGEPILKGTRITCRSVLGRIEGGETLEELVEDYPEISMEAFEAALVYAKAHPPRGRPSAGKPWRKAA
SIO_010081: CEP88_RS00125
subclass of: SO_0000673
so part of: CEP88_RS00125
location: complement(34457..35056)
location: region:34457-35056:-1
so has part: feature:34457-35056:-1:exon

WP_050759150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34457-35056:-1:exon

CEP88_RS00130
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00130
old locus tag: CEP88_00130
so part of: sequence
location: complement(35259..35888)
location: region:35259-35888:-1
so has part: feature:35259-35888:-1:exon
subclass of: SO_0000010

position:35259:-1
position: 35259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35888:-1
position: 35888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35259-35888:-1:exon

CEP88_RS00130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00130
old locus tag: CEP88_00130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009803631.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SMC-Scp complex subunit ScpB
translation: MTVAAKRKLLRGQGGSASESVFDRELVDLPQELRWREWMGRIEAELFASASPVGREDLTRVVGEGASVEMLIDDIQAELVGRPYELAEVSGGWMFRTKTQFAEAIKAAANLGDQSLAFTEMEMGVLCAIAYHQPIDWAGLKDIFGKEVSRDLLARLRFKELIASGPRAPRPGAPHTFVTTPEFLATFDLQSLRDLPDLDLGVGDKNVDA
SIO_010081: CEP88_RS00130
subclass of: SO_0000673
so part of: CEP88_RS00130
location: complement(35259..35888)
location: region:35259-35888:-1
so has part: feature:35259-35888:-1:exon

WP_011655389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35259-35888:-1:exon

CEP88_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00135
old locus tag: CEP88_00135
so part of: sequence
location: complement(35885..36847)
location: region:35885-36847:-1
so has part: feature:35885-36847:-1:exon
subclass of: SO_0000010

position:35885:-1
position: 35885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36847:-1
position: 36847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35885-36847:-1:exon

CEP88_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00135
old locus tag: CEP88_00135
inference: COORDINATES: protein motif:HMM:NF018841.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1403 family protein
translation: MTFQPAALSDDLKTLPKLPGWVTSTRAETLETVAFRSGAALTVLDGLVSDPKHGVPVKLFANHLALKAATATSKLEGRLAREADIRDAYYLTPPGEARGPDGDLLAFWREAAQMRMSSREWQAELRGLVGPDAVAEADNSLTATVAHAKAHGPLAGCVSAMRAVLEVDDRGERIACLLSDVVLARALNWTTVLPVSGLRLTKGMLRDLVADGQGAELKVQQRLLESVEDTIRQARDLSSKSVALKAVAPKLRAKGSDAAVALFLSEGTVAPPLMLSPMIRGTTIPMTDRAARRFCDRLVELGVARELTGRPTFRLYGIAS
SIO_010081: CEP88_RS00135
subclass of: SO_0000673
so part of: CEP88_RS00135
location: complement(35885..36847)
location: region:35885-36847:-1
so has part: feature:35885-36847:-1:exon

WP_011655388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35885-36847:-1:exon

CEP88_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00140
old locus tag: CEP88_00140
so part of: sequence
location: 36972..38186
location: region:36972-38186:1
so has part: feature:36972-38186:1:exon
subclass of: SO_0000010

position:36972:1
position: 36972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38186:1
position: 38186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36972-38186:1:exon

CEP88_RS00140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00140
old locus tag: CEP88_00140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009574265.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MTDNLINNGTKTTPEAEILTAASNSRSSDAQHDDTAPAGEVLLDIDPDELLSDPAEKEETSAQDIALPDHVAGSGSLDRLIDQARDYAEAATAENTNKAYKADWKHFTGWCRRKGVDALVPSPAVIGLYISDCAKPQDGSPALSVSTIERRLSGLAANYRQRGLALDMKDRHIASVWAGIKRHHAKPPTQKEAVLIEDVLAMVGALSYSLRDLRDRAILLIGYAGGLRRTEIVGLDVGKDESDDGRGWVEILEGGAVLHIKGKTGWREVEIGRGSADQTCPVYALEQWLHYAKIDVGSVFRQVFRDNSRIGPERLSDKHVVRLIKRLVLETGVGLDRPALSKLSDEERAKFFAGHSLRAGLASGAEVDERYVQKQLGHASAEMTRRYQRRRDRFRVNLTKAVGL
SIO_010081: CEP88_RS00140
subclass of: SO_0000673
so part of: CEP88_RS00140
location: 36972..38186
location: region:36972-38186:1
so has part: feature:36972-38186:1:exon

WP_011655387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36972-38186:1:exon

CEP88_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00145
old locus tag: CEP88_00145
so part of: sequence
location: 38240..38545
location: region:38240-38545:1
so has part: feature:38240-38545:1:exon
subclass of: SO_0000010

position:38240:1
position: 38240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38545:1
position: 38545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38240-38545:1:exon

CEP88_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00145
old locus tag: CEP88_00145
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSLLHLSIYANDPESVATFLAQLMGGVAMPFPPFPDCWIACAAEDDGIAIEVYPTTHVLEAGVEQVSCEIKTRDASSTFVHVALCAILSSSEIVTLQPWAV
SIO_010081: CEP88_RS00145
subclass of: SO_0000673
so part of: CEP88_RS00145
location: 38240..38545
location: region:38240-38545:1
so has part: feature:38240-38545:1:exon

WP_011655385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38240-38545:1:exon

CEP88_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00150
old locus tag: CEP88_00150
so part of: sequence
location: complement(38751..39173)
location: region:38751-39173:-1
so has part: feature:38751-39173:-1:exon
subclass of: SO_0000010

position:38751:-1
position: 38751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39173:-1
position: 39173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38751-39173:-1:exon

CEP88_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00150
old locus tag: CEP88_00150
inference: COORDINATES: protein motif:HMM:NF013970.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MTLYMLDTDICSYLMREHPAAVLRAMEKQVEAGEDICISVITYSELRLGAARSQARAKYDGLIDALSDRLDFIADWSTKEADRFADVQSHLLGQGAPIGANDTMIAAHALSLGAVLVTNNQRHFSKIEELVLENWLDQSD
SIO_010081: CEP88_RS00150
subclass of: SO_0000673
so part of: CEP88_RS00150
location: complement(38751..39173)
location: region:38751-39173:-1
so has part: feature:38751-39173:-1:exon

WP_011655384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38751-39173:-1:exon

CEP88_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00155
old locus tag: CEP88_00155
so part of: sequence
location: complement(39170..39400)
location: region:39170-39400:-1
so has part: feature:39170-39400:-1:exon
subclass of: SO_0000010

position:39170:-1
position: 39170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39400:-1
position: 39400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39170-39400:-1:exon

CEP88_RS00155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00155
old locus tag: CEP88_00155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003456080.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MTAIAKLFTNGRSQAVRIPKDFAFHGIDEVSVRKIGNKLVLEPIRKTWTSLADEEPAAADFMAERPDLLNPDRVKF
SIO_010081: CEP88_RS00155
subclass of: SO_0000673
so part of: CEP88_RS00155
location: complement(39170..39400)
location: region:39170-39400:-1
so has part: feature:39170-39400:-1:exon

WP_011655383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39170-39400:-1:exon

CEP88_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
gene: repC
locus tag: CEP88_RS00160
old locus tag: CEP88_00160
so part of: sequence
location: complement(39476..40789)
location: region:39476-40789:-1
so has part: feature:39476-40789:-1:exon
subclass of: SO_0000010

position:39476:-1
position: 39476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40789:-1
position: 40789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39476-40789:-1:exon

CEP88_RS00160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
gene: repC
locus tag: CEP88_RS00160
old locus tag: CEP88_00160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009574266.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid replication protein RepC
translation: MTHTGWRKPTPGLVAAEKLAQAGEHLSIPKTRAIVAAKKVAAAIGLKSQDLLLLDTFGAVTQPQDWEQGKRPIVWASNNFLMEQTGFSLATLKRHARRLCEAGLIAFKDSPNGKRYGRRDEDGVIVEAYGFDLAPLAARTVEFEALHAQLLEERQLCKSLRNTITVMRRVIRAKIEKALESRLKGPWRDLQDEFSLMLERLPKRSTGTNKLIDIVDWFKSLQARVEAAFEAAFDWPEESDANLSPQEHESESNIVSLYKNMNPSGVNNEPHILTTTQLDPVKSNRFETKHAEATPPELPPTEQVEKSQEVDLDIEWSTHTGKRTSDVDIPMLMLTCPQFAELARDMEGYIRDWNGVHRAAGKVRPMVGISESAWNVAQQTLGPAVAAAALALIYDKHATGEVSSPGGYLRGMVEKAMVGELHLDRSFYGRLGERAGA
SIO_010081: CEP88_RS00160
subclass of: SO_0000673
so part of: CEP88_RS00160
location: complement(39476..40789)
location: region:39476-40789:-1
so has part: feature:39476-40789:-1:exon

WP_011655382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39476-40789:-1:exon

CEP88_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00165
old locus tag: CEP88_00165
so part of: sequence
location: complement(41030..42052)
location: region:41030-42052:-1
so has part: feature:41030-42052:-1:exon
subclass of: SO_0000010

position:41030:-1
position: 41030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42052:-1
position: 42052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41030-42052:-1:exon

CEP88_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00165
old locus tag: CEP88_00165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009504366.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB N-terminal domain-containing protein
translation: MKRGIKRSLVRPVKPADPFESPEGEQSLPEAKPEVLSQTKASGGAGSAWKAGAVAQAQAGLDEAREKLAIDIMAGDHVIEIDPDALTDPIGSDRRANWMEHDDFLTFVESIRENGQDMPILVWPKDPEWRPDQIDPENLERVQFLILAGRRRTEAARKIGRKVRAVIASQSGRGSAESTFNMLVLRFRENDEREDLSAFERLLSIGQMFEELTSASKSKIKAKVFAERIGVHESLVSRARAVSDAREEILSTFKNAYEMSFRQLQEALAAISDDTTQKKTRSKRPRKLLVTRKVGARNLSLSTQGGRLAVSAPGMNLDKQALEGLGDVIATYLQEHGSKK
SIO_010081: CEP88_RS00165
subclass of: SO_0000673
so part of: CEP88_RS00165
location: complement(41030..42052)
location: region:41030-42052:-1
so has part: feature:41030-42052:-1:exon

WP_011655381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41030-42052:-1:exon

CEP88_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00170
old locus tag: CEP88_00170
so part of: sequence
location: complement(42049..43404)
location: region:42049-43404:-1
so has part: feature:42049-43404:-1:exon
subclass of: SO_0000010

position:42049:-1
position: 42049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43404:-1
position: 43404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42049-43404:-1:exon

CEP88_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00170
old locus tag: CEP88_00170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187063.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MSGNLEQFLTDLSRGLDRTMVSVNKELTLRTRIQRKWSMRQCARFLNVGITYLNKFAKSTADFPQGEYVGRERVFTIEELMHMRALFAETAKRPYDYLAWRKPEDPLPVISFASQKGGTAKSLTAAHFAQYLSLNYGMRVGVMDADPQSTITLYFVGGEGLPAMPTEDTASMVDFAGLFPNGDKSYTDYDAEELDSFFLRTSWPGLRLVPAHGETSEGEIQIARLVSERPKGKNFYRFLRDSIERWRDGHVPQTEPNELASDGVLDREKFDAALNETLDCIVIDYQPALTLFQLNNVVASSSLVIPQTMKGFDIATLSTFVNGLLGMLQHILRNERIDIGSGANMLLPTIVQRTNNQDLDQISNLLEHCPAEILPVFYLRSDSISNASDVYQSVYEYQADTPGKRKGIERFITNADAVNDAIVSRLWPGRERGYADKWMDDFYQDDEEVGK
SIO_010081: CEP88_RS00170
subclass of: SO_0000673
so part of: CEP88_RS00170
location: complement(42049..43404)
location: region:42049-43404:-1
so has part: feature:42049-43404:-1:exon

WP_011655380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42049-43404:-1:exon

CEP88_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00175
old locus tag: CEP88_00175
so part of: sequence
location: complement(43602..44168)
location: region:43602-44168:-1
so has part: feature:43602-44168:-1:exon
subclass of: SO_0000010

position:43602:-1
position: 43602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44168:-1
position: 44168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43602-44168:-1:exon

CEP88_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00175
old locus tag: CEP88_00175
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQTKVNQCSHLVHQQQTLPRMNVHNGSRPSETVAIGCPLPTLHKANPSVELSFRPDNTRTIQLVQMATQQQGWLKFWQVRSSVVTVAVEEDLFFNESAIICSYGQSCNGRVNVTTSPFLSQLRIPAADVAFFSITITRDINTRNPEDAQICIRSWKSVRPAVTPSCLYTHAVEAHLQLNADGRSDAVR
SIO_010081: CEP88_RS00175
subclass of: SO_0000673
so part of: CEP88_RS00175
location: complement(43602..44168)
location: region:43602-44168:-1
so has part: feature:43602-44168:-1:exon

WP_044033563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43602-44168:-1:exon

CEP88_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00190
old locus tag: CEP88_00190
so part of: sequence
location: 45280..45759
location: region:45280-45759:1
so has part: feature:45280-45759:1:exon
subclass of: SO_0000010

position:45280:1
position: 45280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45759:1
position: 45759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45280-45759:1:exon

CEP88_RS00190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00190
old locus tag: CEP88_00190
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVTTFPSKGRVTPEGQADEPAARYEAAPQTVISLKGYRQELTRKARAQVLREMRGKVKAPSLTYVLLAVFFAGTAALAYGHNYFDISDAARSGLVVGSMCLLAWIYHAIFLGAFFTLHAGMLLVFGSTYFFEAIMEVSIVLVGIVLTTLFMKWIGLLE
SIO_010081: CEP88_RS00190
subclass of: SO_0000673
so part of: CEP88_RS00190
location: 45280..45759
location: region:45280-45759:1
so has part: feature:45280-45759:1:exon

WP_011655378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45280-45759:1:exon

CEP88_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00195
old locus tag: CEP88_00195
so part of: sequence
location: 45756..46448
location: region:45756-46448:1
so has part: feature:45756-46448:1:exon
subclass of: SO_0000010

position:45756:1
position: 45756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46448:1
position: 46448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45756-46448:1:exon

CEP88_RS00195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00195
old locus tag: CEP88_00195
EC number: 4.2.2.n1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015494355.1
GO function: GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase domain-containing protein
translation: MIYRKGVFPVFCYLQFLPMVVFATVFEFNTDGSQVYVGRAGEGERRALVEAALSEQSVELPSNRQAYRTLAQQTALRFGRDRGVRKTGLTSSQFVDLFTALIHQESRFNPRAVSHKGAQGLGQLMPGTARALRVSDPFDPTQNLTGSAMYLLAQLRAFGSVELALAAYNAGPGAVQRYDGVPPFRETQDYVRRVAERAGLSVARPVPVNANVRDEEITVTPPERKSVWEY
SIO_010081: CEP88_RS00195
subclass of: SO_0000673
so part of: CEP88_RS00195
location: 45756..46448
location: region:45756-46448:1
so has part: feature:45756-46448:1:exon

WP_245897139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45756-46448:1:exon

CEP88_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00200
old locus tag: CEP88_00200
so part of: sequence
location: 46466..46717
location: region:46466-46717:1
so has part: feature:46466-46717:1:exon
subclass of: SO_0000010

position:46466:1
position: 46466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46717:1
position: 46717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46466-46717:1:exon

CEP88_RS00200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00200
old locus tag: CEP88_00200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007121038.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbC/VirB2 family protein
translation: MLATLTAVALASPAAAQDLSPITNLFTTIGTALTGTLGRAAGLVALAGVGFAFLAGRMNWAVAGSILIGLVIIFGAATILAGL
SIO_010081: CEP88_RS00200
subclass of: SO_0000673
so part of: CEP88_RS00200
location: 46466..46717
location: region:46466-46717:1
so has part: feature:46466-46717:1:exon

WP_245897141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46466-46717:1:exon

CEP88_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00205
old locus tag: CEP88_00205
so part of: sequence
location: 46720..46995
location: region:46720-46995:1
so has part: feature:46720-46995:1:exon
subclass of: SO_0000010

position:46720:1
position: 46720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46995:1
position: 46995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46720-46995:1:exon

CEP88_RS00205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00205
old locus tag: CEP88_00205
inference: COORDINATES: protein motif:HMM:NF016957.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB3 family type IV secretion system protein
translation: MQNPCFKALTRPVSFLGLPFKFVVILAIVCFGGFIATLSFVYLLLSALIGYGALRLLSAYDPMIIDVIFVALSKTPLPPSYFKGKGIIYRA
SIO_010081: CEP88_RS00205
subclass of: SO_0000673
so part of: CEP88_RS00205
location: 46720..46995
location: region:46720-46995:1
so has part: feature:46720-46995:1:exon

WP_011655375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46720-46995:1:exon

CEP88_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00210
old locus tag: CEP88_00210
so part of: sequence
location: 46988..49348
location: region:46988-49348:1
so has part: feature:46988-49348:1:exon
subclass of: SO_0000010

position:46988:1
position: 46988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49348:1
position: 49348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46988-49348:1:exon

CEP88_RS00210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00210
old locus tag: CEP88_00210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011655374.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB4 protein, putative
translation: MLDVLKTRARKDLEASEDQGEHLLVRHLPYVGAVTDDVMMLRDGDLIASFIVEGIAADTASEADVDDLSLAFSRTVTQAQSDVGIYVHRFSSVVSPKLTGVAPEVSTFAAAVDQRWQSHIETSGLRSRQAMITVTLRPSKVKSLWAKFVSGGVAAQRGTREKDVSRLNEIVDHFMEAVRVASPTRLSISSGEWIGLLRAINTGQFFTSPPGAGFMPLADMIAVGRLDFRNDTFVSFGSDSKDTRYGAVFSIKSYPSNSAPGIFNRFDLPFDMVISQSYTPVNPVESEERISRTARQMQAADDAAQTLKDQLVDALDDVASGRIGMGMHHATITVFAGTVAELDEAAASIRGAGQRAGATVVREDVGARAAFFAQHPGNYAYRARAAMISSTNFADFTALHATPAGHSRAQTPWGESVTILPDIRGEPYRFNFHLAGELQERTVGHTLVIGMTGAGKTLGACFLLAQAARLNPRIIAFDKDQGMEMPLRALGADYAKVRMGEPTGFNPFAAEADERGTAWLTSWLEATLAAQGTLSATQREALSNATRSNMETDPSLRTMRQFRSQLRSVDDGGDLHTRLGLWDDGQYGWLFSGEGQDETLSFNNDVTAFDLTEIFETQEVRTAWLAYVFRRIERQIEDERPTIILIDEAWKVLDDPFFEAMLKDWALTLRKKNVVLMLMTQRVDHLVNSAAGGSILESCVTTLVYPNSRYTLDEVAPLNFTDAEAAFVTSSAGGQRLALIRNGDVSTVVNMDLGALGPLLKVLGGGKGESAPDGWRDDTSFWKDIG
SIO_010081: CEP88_RS00210
subclass of: SO_0000673
so part of: CEP88_RS00210
location: 46988..49348
location: region:46988-49348:1
so has part: feature:46988-49348:1:exon

WP_011655374.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46988-49348:1:exon

CEP88_RS20665
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS20665
so part of: sequence
location: 49348..49482
location: region:49348-49482:1
so has part: feature:49348-49482:1:exon
subclass of: SO_0000010

position:49482:1
position: 49482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49348-49482:1:exon

CEP88_RS20665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS20665
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLIGLLVVASVLLAGCANYTEQKSPCVCNWDAINDQQQEESVA
SIO_010081: CEP88_RS20665
subclass of: SO_0000673
so part of: CEP88_RS20665
location: 49348..49482
location: region:49348-49482:1
so has part: feature:49348-49482:1:exon

WP_281259754.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49348-49482:1:exon

CEP88_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00215
old locus tag: CEP88_00215
so part of: sequence
location: 49479..50189
location: region:49479-50189:1
so has part: feature:49479-50189:1:exon
subclass of: SO_0000010

position:49479:1
position: 49479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50189:1
position: 50189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49479-50189:1:exon

CEP88_RS00215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00215
old locus tag: CEP88_00215
inference: COORDINATES: protein motif:HMM:NF019608.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MKPFRNRMAVTCLIASVSFGGAAQAQGVPVIDTTAIAQFVAQLDQARQAYTVQLQELTNLENQLASMIGPRAISAILNDVTEIQKRVSATSLNEIQDAVLSGTALTDLAELNDAISDIRNRFDLAGLNDIFTSLEPIDAAITEQATAGVAAIATAEDTYVRANDAMDRINTMITGIDGNADLKASIDYNTRVMAELAVLLNENLRVQAAATNVAGANALAQARDNAAARQFNLIGD
SIO_010081: CEP88_RS00215
subclass of: SO_0000673
so part of: CEP88_RS00215
location: 49479..50189
location: region:49479-50189:1
so has part: feature:49479-50189:1:exon

WP_011655373.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49479-50189:1:exon

CEP88_RS00220
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00220
old locus tag: CEP88_00220
so part of: sequence
location: 50192..50647
location: region:50192-50647:1
so has part: feature:50192-50647:1:exon
subclass of: SO_0000010

position:50192:1
position: 50192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50647:1
position: 50647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50192-50647:1:exon

CEP88_RS00220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00220
old locus tag: CEP88_00220
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYTKISFGALAVALSLSSPAMAVEPGSWHCEKPPVLHPDVQAGIASISSQPSLRFIILEYIKQYDAKEIMAACRAFADGQPSEISCLNGRRDWNEIRQAFPDDLIGLPPMRHAEHMQTLQTAENPVWAAHAFCESVGALRDDGFSLEVGDG
SIO_010081: CEP88_RS00220
subclass of: SO_0000673
so part of: CEP88_RS00220
location: 50192..50647
location: region:50192-50647:1
so has part: feature:50192-50647:1:exon

WP_011655372.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50192-50647:1:exon

CEP88_RS00225
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00225
old locus tag: CEP88_00225
so part of: sequence
location: 50651..51823
location: region:50651-51823:1
so has part: feature:50651-51823:1:exon
subclass of: SO_0000010

position:50651:1
position: 50651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51823:1
position: 51823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50651-51823:1:exon

CEP88_RS00225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00225
old locus tag: CEP88_00225
inference: COORDINATES: protein motif:HMM:NF016491.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MATFISDALNAIDGTILNYAETVFGAFAGPLTGALQAMGLAGLAFVGFNTLTSFYPIRVSEYLKWGVRYVIILSVATTWAQFAPIFDIITNVPSNIGATLLAQTGAINLNVAMDNMVTNIFDVSDDVTRRGGTFNFGMALTAAILTILGAVMACVAIIVAAVGKIGLAMAVSLAPVFIASLLFRSTSDLFTTWTRFTLGFAMIPLALSGIMGAIIGVGTAWMVGPAGVTRLADVAGFLIVVLAGVIMMSQIPTIVNSLAGGIVATANGIREAQNAGQVVRTGARATEPRARQVASAVGAGRAAEGGAMARVRAAYEDSRATSAAMRLNKEKFRARSARLGRQTGMGERWEAGRAGLSQASREQAASRKKINIRLQDEPPATNHVGTKKTD
SIO_010081: CEP88_RS00225
subclass of: SO_0000673
so part of: CEP88_RS00225
location: 50651..51823
location: region:50651-51823:1
so has part: feature:50651-51823:1:exon

WP_011655371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50651-51823:1:exon

CEP88_RS00230
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00230
old locus tag: CEP88_00230
so part of: sequence
location: 51887..52561
location: region:51887-52561:1
so has part: feature:51887-52561:1:exon
subclass of: SO_0000010

position:51887:1
position: 51887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52561:1
position: 52561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51887-52561:1:exon

CEP88_RS00230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00230
old locus tag: CEP88_00230
inference: COORDINATES: protein motif:HMM:NF016238.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MPRQTTDYTFQDEVFFQLRRQRNIAVWTSALSLSIALTSVAAVSLMLPFKEIRPYVVMVDRETGMAEQITATRPADLSEREAVREAELVRYVTERETYDVSDNPIRIPLVLQTSDEQAADSLRTLWNSANEAYPPDRYGRDVLITVIVRNINALDDNTAQVRFTRRLERPGMPAIERSFVATVGFEFRPRVERRLEDVWRNPLGFTVVSYRIAAETLTPQGTGQ
SIO_010081: CEP88_RS00230
subclass of: SO_0000673
so part of: CEP88_RS00230
location: 51887..52561
location: region:51887-52561:1
so has part: feature:51887-52561:1:exon

WP_011655370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51887-52561:1:exon

CEP88_RS00235
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00235
old locus tag: CEP88_00235
so part of: sequence
location: 52558..53316
location: region:52558-53316:1
so has part: feature:52558-53316:1:exon
subclass of: SO_0000010

position:52558:1
position: 52558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53316:1
position: 53316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52558-53316:1:exon

CEP88_RS00235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00235
old locus tag: CEP88_00235
inference: COORDINATES: protein motif:HMM:NF015487.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbG/VirB9 family P-type conjugative transfer protein
translation: MMLRALICLLAAVLALPLAAETKPRSLPSDPRIREYRFDPHTVYRLDVFMKFITSVHFGDGEEIQSVQIGDSASWEVVRLSRGDVLSVKPVTEGAYTNMTVLTDRRAYTFELRARTANVGSPKLNYRISFRYPHEEQQRAAERHARQDRAKDFNYMASGDQTVRPSQIYDDGVATFFTFPAGAPRPAIFRVDAQGREAIVNVRAVEDGFVVDSTSNRWTIRRGERELCVAHADVIDTVPVVQTTQRTNAEER
SIO_010081: CEP88_RS00235
subclass of: SO_0000673
so part of: CEP88_RS00235
location: 52558..53316
location: region:52558-53316:1
so has part: feature:52558-53316:1:exon

WP_050759149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52558-53316:1:exon

CEP88_RS00240
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00240
old locus tag: CEP88_00240
so part of: sequence
location: 53316..54647
location: region:53316-54647:1
so has part: feature:53316-54647:1:exon
subclass of: SO_0000010

position:54647:1
position: 54647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53316-54647:1:exon

CEP88_RS00240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00240
old locus tag: CEP88_00240
inference: COORDINATES: protein motif:HMM:NF015688.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbI/VirB10 family protein
translation: MTDDPNTVEARVADRQARLAGGQPRNTMRTVAIAGGVLAFILLAAVLLAQDQMRALFSGTSDSEDFQRTSTADPGLSTQMTVPQQVQTDVTEPLDTTINMPAPSDPALVEQAEGNAELAALQAQLDELIAAQGQQGVDPDALNDLLDAQAARLQEEFDNQARLQEQLYQQQLQAARAAAVPTGPNPNDIAEQEARQRLEEERARRAAIREEQIRSPALLFDGGGPAGAASGGTGSRDLNANESFLQSASRQPHETAKAGSIPNPSRTIVQGTIIEAVLETALSTELPGTLRAVTSVDVYSFDGSTVLMPKGTRLIGSYSSEVTLAQSRALIAWNRAITPDGRSVSLGGIGGDRLGRSGQTGFVDTRFGERFGSAALISVLGIAPSLVIDDNSSNAQQELAEDLGDDLRNTTASVLNDYLSLPPIIYVDQGAELTVFVDRDLVF
SIO_010081: CEP88_RS00240
subclass of: SO_0000673
so part of: CEP88_RS00240
location: 53316..54647
location: region:53316-54647:1
so has part: feature:53316-54647:1:exon

WP_011655368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53316-54647:1:exon

CEP88_RS00245
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00245
old locus tag: CEP88_00245
so part of: sequence
location: 54644..55627
location: region:54644-55627:1
so has part: feature:54644-55627:1:exon
subclass of: SO_0000010

position:54644:1
position: 54644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55627:1
position: 55627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54644-55627:1:exon

CEP88_RS00245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00245
old locus tag: CEP88_00245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011654614.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATPase, T2SS/T4P/T4SS family
translation: MSGPQSHAEFGLLPLRDLLTSDEVNEVVVNPDGSIWVEYANREHMALVAVSLPENQVRAIGSHLAGETKNALGKDHPIVSGRVFVFGQSVRVQVIVPPAVEQGISLSIRKYINRVIGVSEIVFLDGAQVDVAQERRDKLEKIDQLAKAGHLSALFQVAIDERLNILISGGTSSGKTTTARGLLGITDLQERVVTIEDAAELMPPHKNQVPLIADRIKGSVRSPASLLESSLRMRPDRLILGEIRGVEALNFLEAINTGHPGSISTIHADTPALALERMALMAMQSGLQLTMQDVIAYASQTIDMIVQVGRKGGKRGVMEIYIPALQG
SIO_010081: CEP88_RS00245
subclass of: SO_0000673
so part of: CEP88_RS00245
location: 54644..55627
location: region:54644-55627:1
so has part: feature:54644-55627:1:exon

WP_011655367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54644-55627:1:exon

CEP88_RS00250
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00250
old locus tag: CEP88_00250
so part of: sequence
location: 56008..57018
location: region:56008-57018:1
so has part: feature:56008-57018:1:exon
subclass of: SO_0000010

position:56008:1
position: 56008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57018:1
position: 57018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56008-57018:1:exon

CEP88_RS00250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00250
old locus tag: CEP88_00250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006203939.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4105 domain-containing protein
translation: MRLPFLGIWVVLACCCIAILTFWGTLALWFRLPGSDTLRYMACGLIACLGSGAFIAQFNARRFKAAVIFAIAFLGLIGWWAFLEPPKTQDWSPEVVRQSTGVVKGDTLTVTDIRDFEWRADGSFRENWEQQSYDLTELNTVDLFLSYWAGPQMAHFILSFGFEDGQQLAWSVEVRRQKGGRFSPVADFFKENTLVILAATEPDVVGLRANIRGENVQLFRLSADRDVARALLEAYVADANALAQAPEWYNSVSTNCTTVVMKLLSAIGSGLPFDWRLIANGYLPEFGYEQGLLNTDYTVDELRRLGSITQRAQQFGLKPGFSKAIRVGVPIARDGL
SIO_010081: CEP88_RS00250
subclass of: SO_0000673
so part of: CEP88_RS00250
location: 56008..57018
location: region:56008-57018:1
so has part: feature:56008-57018:1:exon

WP_011655366.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56008-57018:1:exon

CEP88_RS00255
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00255
old locus tag: CEP88_00255
so part of: sequence
location: 57193..58227
location: region:57193-58227:1
so has part: feature:57193-58227:1:exon
subclass of: SO_0000010

position:57193:1
position: 57193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58227:1
position: 58227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57193-58227:1:exon

CEP88_RS00255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00255
old locus tag: CEP88_00255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011497995.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS481 family transposase
translation: MLNTTDKIIRHKTGLLNLAEELGNVSKACQVMGMSRDTFYRYKSAVDEGGVEALFERTRRKPNLTNRVDEAVEQAVVKSATDFPAYCQARTSNELRKQGVFVSPSGVRSIWLRHDLANFKTRLKALEAKVAEEGGILTEAQVQALEKKKLDDEACGEIDTAHPGYLGSQDTFYVGTLKGVGRVYQQTYVDTYSKVAHAKLYSTKTPITAADLLNDRVLPFHEEHDLPVLRILTDRGTDYCGRVDKHDFQLFLAINDIAHTKTKVKSPQTNGICERFHKTILQEFYQVAFRKKVFETIEALQADLDEWLHHYNYERTHQGKMCCGRTPVETMIDGKEIWKEKFVA
SIO_010081: CEP88_RS00255
subclass of: SO_0000673
so part of: CEP88_RS00255
location: 57193..58227
location: region:57193-58227:1
so has part: feature:57193-58227:1:exon

WP_011655365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57193-58227:1:exon

CEP88_RS00260
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00260
old locus tag: CEP88_00260
so part of: sequence
location: 58418..59929
location: region:58418-59929:1
so has part: feature:58418-59929:1:exon
subclass of: SO_0000010

position:58418:1
position: 58418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59929:1
position: 59929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58418-59929:1:exon

CEP88_RS00260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00260
old locus tag: CEP88_00260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010442053.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0071705 - nitrogen compound transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BCCT family transporter
translation: MNRTTLLLVTSILTIAAIAVWGVLDPDGIVVSASLIVEQYFVSRGWFVMLAVSAMLFFCIGLAASPYGKIRLGADEDRPEFSTPSWIAMLFAAGMGVGLLFWAVAEPLTHYHFATDFMDPPVAAQQALLATNFHWGIHAWAIYGATALVIAYFAFRRGTPMLVSAPVENLFPDETWARIVGWLSDFMAIVAIAIGVAGSIAMGVFQVADGIDVLMGGSQAAPWLITAVFAVMVAAYLPPLLVDLGAGMSKLSNLAMSIAIGLIAFVMIVGPTEYLMNAIVTSFGEYVSTAIPRGFQTLNFFDASLINWFQDWTLTYMVWWIAWGPFVGVFIARISRGRTIREFVLGVLIGPTLFSIIWFGTFGGIGFYDALLGTGELLALTTSNLERVTFGLLERLPFTTLTTIATIVAAFLFIVTSVVSAAFVLGTFSSGGDPNPAPKVRLVWGVLLGVLGGAMVLSGSIDAVKKLIALGALPFVFVSILLCVCMLRALREEDVKGVSHADR
SIO_010081: CEP88_RS00260
subclass of: SO_0000673
so part of: CEP88_RS00260
location: 58418..59929
location: region:58418-59929:1
so has part: feature:58418-59929:1:exon

WP_011655364.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58418-59929:1:exon

CEP88_RS20670
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS20670
so part of: sequence
location: 59916..60050
location: region:59916-60050:1
so has part: feature:59916-60050:1:exon
subclass of: SO_0000010

position:59916:1
position: 59916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60050:1
position: 60050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59916-60050:1:exon

CEP88_RS20670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS20670
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLIGDLVDTLLNLGTFAFVGAMIWLLMRKPVAPPHDKSDNPKDR
SIO_010081: CEP88_RS20670
subclass of: SO_0000673
so part of: CEP88_RS20670
location: 59916..60050
location: region:59916-60050:1
so has part: feature:59916-60050:1:exon

WP_011655363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59916-60050:1:exon

CEP88_RS00265
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
gene: gltS
locus tag: CEP88_RS00265
old locus tag: CEP88_00265
so part of: sequence
location: 60066..61271
location: region:60066-61271:1
so has part: feature:60066-61271:1:exon
subclass of: SO_0000010

position:60066:1
position: 60066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61271:1
position: 61271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60066-61271:1:exon

CEP88_RS00265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
gene: gltS
locus tag: CEP88_RS00265
old locus tag: CEP88_00265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006935839.1
GO function: GO:0015501 - glutamate:sodium symporter activity [Evidence IEA]
GO process: GO:0015813 - L-glutamate transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium/glutamate symporter
translation: MTSPIVVPAFIAATLGFIVFFLGAFLTRKVAFLKNYNIPEPVSGGIAVAVLTWGWFVMTGREITFEMDVRDYLLVLFFATIGLNARIADLFKGGRLLVILLLLTVGFMLLQNIVGLIGVQLFGLPNPVSVLLGSASLIGGHGTAIAWGPQIETLTGFEAAAEVGIATATLGLVLAALIGGPIAKWLIDRNHLSGESDATPIVGLSFDKETGESVNHVSLMRATLAAHVAILLGWFAHQAISEMGLLLPLFVPCLLMGIVMSNTVPYLFKSLTWPAGSKALAVVSDYALSVFLAMSLMSMQLWTLAELGGPLIIVLLMQVVMTVGFILFVVFRAIGRGYLAAVLSAGFAGFALGATPTAIANMSSVTKRYGAAPLAFIVLPLVSAFFVDLANALAIRFFIGL
SIO_010081: CEP88_RS00265
subclass of: SO_0000673
so part of: CEP88_RS00265
location: 60066..61271
location: region:60066-61271:1
so has part: feature:60066-61271:1:exon

WP_011655362.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60066-61271:1:exon

CEP88_RS00270
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00270
old locus tag: CEP88_00270
so part of: sequence
location: complement(61279..62568)
location: region:61279-62568:-1
so has part: feature:61279-62568:-1:exon
subclass of: SO_0000010

position:61279:-1
position: 61279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62568:-1
position: 62568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61279-62568:-1:exon

CEP88_RS00270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00270
old locus tag: CEP88_00270
inference: COORDINATES: protein motif:HMM:NF017773.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta hydrolase
translation: MLNKLVCLFLLCGLAACAPANSVTTTIGLMEPPVVYQSGGIDPFPATLPPDRQIPYATQRVPALVDGVVTYTDAPETALRVGHVDVTISGKDGSLQISDSLLPAQDRNTALFVDVGEIHEAGPLAASRHPVADPTLFGPDAAAADRAFAARINRQLAATKGGNLVIYVHGVRSDFSNPVLAAAELQHFAGYRNVFSAFAWPANSSLISYLQDTEEATGSAFLFRRYIQFLAAETNAKRIHIVAHSAGTRLVTEAIGQFGLEYSRASNQQIKRELKLGKVILIGSDASPERIGTYLIDGADRIVDELTIYTSTRDRALRLSDALFGLGGRLGQTTTTALPDYVQAWLESFDDLYIIDVTDAEASNAANGHGYLRGSPWVSSDIVTSINFDLTPAERGLVRAPVGPGWVFPPDYPSKLRSAVRRADPSLVR
SIO_010081: CEP88_RS00270
subclass of: SO_0000673
so part of: CEP88_RS00270
location: complement(61279..62568)
location: region:61279-62568:-1
so has part: feature:61279-62568:-1:exon

WP_011655361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61279-62568:-1:exon

CEP88_RS00275
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00275
old locus tag: CEP88_00275
so part of: sequence
location: complement(63079..63663)
location: region:63079-63663:-1
so has part: feature:63079-63663:-1:exon
subclass of: SO_0000010

position:63079:-1
position: 63079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63663:-1
position: 63663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63079-63663:-1:exon

CEP88_RS00275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00275
old locus tag: CEP88_00275
EC number: 3.4.21.105
inference: COORDINATES: protein motif:HMM:NF013827.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rhomboid family intramembrane serine protease
translation: MKVTLPMSPFDLHPTLRGFCLTIILIEGVLITADAFNLTIRAEAIEALGFTLNWRNEPWRIASHVFVHGDAWHMNFNIIPILLFGDALALLRGIKETTFIAIMSILAGIAGFAIFGIHPAMIGASAVSFGLAAACLVHWPNLTNVHRLLAVALGATVLPSSIWWTGIAWEAHIAAAVVGAGSAAVLRKLSPSEH
SIO_010081: CEP88_RS00275
subclass of: SO_0000673
so part of: CEP88_RS00275
location: complement(63079..63663)
location: region:63079-63663:-1
so has part: feature:63079-63663:-1:exon

WP_074958791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63079-63663:-1:exon

CEP88_RS00280
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
gene: virD4
locus tag: CEP88_RS00280
old locus tag: CEP88_00280
so part of: sequence
location: complement(63660..65825)
location: region:63660-65825:-1
so has part: feature:63660-65825:-1:exon
subclass of: SO_0000010

position:63660:-1
position: 63660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65825:-1
position: 65825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63660-65825:-1:exon

CEP88_RS00280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
gene: virD4
locus tag: CEP88_RS00280
old locus tag: CEP88_00280
inference: COORDINATES: protein motif:HMM:NF010424.0
note: The ATPase VirD4 is a core component of the VirB/VirD4 form of type IV secretion systems (T4SS), also known as type IVa secretion systems; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system ATPase VirD4
translation: MNKTTADVLVFAGVGAIVGSVPALVAAGACALWLSGLSITTVELDTLLYFAPWITGSIEPFKTAALAGGAVWLVSVIAAVAIGYRPQLASHGSARWAEERDLKKAGLVAPLAEVQGPVFAKFGSPNKRRAYLTSTEIPHSLIAAPTGSGKGIGIVIPTLLTYNGSVVCLDVKGENFETTSRHRAAMGDAVFKFAPYDKDGRTHRYNPIDIVTHVADRRRFTEARRLASSLIIAKSKSAEGFLEGAREIFAASVVYAIEQETPTIAAVHDLISQHGQAHSNFETMAAKAQAPEAVSIFNRMASTDIRTLSAYLSVLSDGGLSLWADPAVRDATAQSDFTFTNLRRQPASIYFVVGPNDLDPLSSLIRLMFQQAVAITQREMPKADEPFPVLFLLDEFASLGRMDALSQAITTLRGYGGRLMIIVQSLSNLQIYGQDGAQNFLANCRLQLFMAPADKDTPDYISRAIGDFTRRARSKSWQTNDFMKSNVQEREEGARLIRPEELRKLGEDTIVALIQNQDPVRTDKVKYYEDKELCPIFEAQTGPLPEPPSLFEGDEADTRIRLFVAAHDPGLIDDTEARRKHLPAPDPSSTKEAPAKVILLPPPDAPASPPPSEPDYDASTRKDVGPTQPTPAPVATETTNSVPKPLSKRMRAIARAKAASKARSLDEDMDEDLEAAAVQDLKDHLTTHSPVQRAIEKARLRAEVNWPDAYGDNKPLRKRGA
SIO_010081: CEP88_RS00280
subclass of: SO_0000673
so part of: CEP88_RS00280
location: complement(63660..65825)
location: region:63660-65825:-1
so has part: feature:63660-65825:-1:exon

WP_011655465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63660-65825:-1:exon

CEP88_RS00285
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00285
old locus tag: CEP88_00285
so part of: sequence
location: complement(65835..68183)
location: region:65835-68183:-1
so has part: feature:65835-68183:-1:exon
subclass of: SO_0000010

position:65835:-1
position: 65835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68183:-1
position: 68183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65835-68183:-1:exon

CEP88_RS00285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00285
old locus tag: CEP88_00285
inference: COORDINATES: protein motif:HMM:NF015397.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
translation: MSAKPSISVLHYLQQAANNTGAPSVLDAVMGEDWAVYKAGNAKKALHIQYVMDQQRKRRGAGAGLAFRVGRQSPQALVKLINKGGANNTQGLKAQMEYLEKDGSVVLQRSEGFFGLDVDSDQKDLMAQAWGLRDTGKSYPMTSHFVVSFPIDTDPEAAARAGRAWAERMFDSGALGDRFDYYTADHRDTAHPHTHVVVARRGLENGQWLKVSRRSLINYDSMRQLQVEVAAEEGIILEATPRLARGIQDRPVPDARLRADTEGRGPTAQAPTHTEITAIATAATILEFSRQIETEATVIETTPVVAQSIARIVGLLRAGHQIAARTELNATMIEEMNDMSEQYEQARSAITDSFRNMDRDISDVADPAERVALQRQTAELRREAAVLLPDERQLQSFTVEEGAESYRGIRAEGGDPEADAIRREATEKANRIAEEAGLDPDEVAARYGQKSVSEGLARQWRMLDYERRARARDAANELPETEEEARHALEMAHSRISEAYRAAERRLERIAATFSEDGQASEQNLPQEQQQNREAVVADIEQRVSNELRDDRYTIYDPMMETEYRFNDFKEATAKAYELGASRIMQQREGDTPVAINKVDNQWPGPLEEDGPDASRFEGLIAARGMALSGEQKTLRGVQLAEELSSAVEDIESGRLSAEDAQRATILVRDTVDRFGPQIRAALDRDDTKDTPSYQSIDPEADQREADRFEQERRDAYNRIEREYDSNALEDQSRQRDKKEDLEQDRKEDLEPQRRLEREAREQLALEDRQRLQERDDDGFGL
SIO_010081: CEP88_RS00285
subclass of: SO_0000673
so part of: CEP88_RS00285
location: complement(65835..68183)
location: region:65835-68183:-1
so has part: feature:65835-68183:-1:exon

WP_050759155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65835-68183:-1:exon

CEP88_RS00290
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
gene: virD1
locus tag: CEP88_RS00290
old locus tag: CEP88_00290
so part of: sequence
location: complement(68180..68659)
location: region:68180-68659:-1
so has part: feature:68180-68659:-1:exon
subclass of: SO_0000010

position:68180:-1
position: 68180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68659:-1
position: 68659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68180-68659:-1:exon

CEP88_RS00290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
gene: virD1
locus tag: CEP88_RS00290
old locus tag: CEP88_00290
inference: COORDINATES: protein motif:HMM:NF010432.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: T-DNA border endonuclease subunit VirD1
translation: MNNQSKDNTPWKNRKMIRGRWREAEDGAAGPARVDKVISVKMTEAELAEFDAQIAELGLNRNRALRIAARRIGGFVENDAKTVELLRDMSRAIAGVATNINQIAKAANRTHDPAYHSFMAERKVLGLELSKLSAVLAPLMEVSRRRSDGLERLQKASSE
SIO_010081: CEP88_RS00290
subclass of: SO_0000673
so part of: CEP88_RS00290
location: complement(68180..68659)
location: region:68180-68659:-1
so has part: feature:68180-68659:-1:exon

WP_044033582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68180-68659:-1:exon

CEP88_RS00295
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00295
old locus tag: CEP88_00295
so part of: sequence
location: 69180..69893
location: region:69180-69893:1
so has part: feature:69180-69893:1:exon
subclass of: SO_0000010

position:69180:1
position: 69180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69893:1
position: 69893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69180-69893:1:exon

CEP88_RS00295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00295
old locus tag: CEP88_00295
inference: COORDINATES: protein motif:HMM:NF010423.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer ATPase VirC1
translation: MNLITFASLKGGAGKTTSLMAACGSLVSRGTRVGLFEADDNQPLHAWREYAQGKGTWNDACEIANAMDLAAFEQAYEHFETSGYDIALADTQGGGSEFNATIIASSDLIVIPSALTRLDLDSTLDTYAVVDEILEQTETPDIPVAILITQMPSRRLTSAQSFCLDIIEQLPSFDCTLPYRSAFADIKSLGMLHIYREALSQIPSKRIAATHITTAIADADRLADTLLEALEAQDAHP
SIO_010081: CEP88_RS00295
subclass of: SO_0000673
so part of: CEP88_RS00295
location: 69180..69893
location: region:69180-69893:1
so has part: feature:69180-69893:1:exon

WP_011655461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69180-69893:1:exon

CEP88_RS00300
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00300
old locus tag: CEP88_00300
so part of: sequence
location: 69880..70527
location: region:69880-70527:1
so has part: feature:69880-70527:1:exon
subclass of: SO_0000010

position:69880:1
position: 69880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70527:1
position: 70527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69880-70527:1:exon

CEP88_RS00300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00300
old locus tag: CEP88_00300
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPIRKPNKSFQEIRADTLAHKGHLTAERGQKTLKGDASGHETKVETVAAAAIPAARQYETTSLPVFMPEPSQNSGNGAEDPALGPKATEQTNTIISNPHDTVRTRLIFPHPKPGVSKTYDQVAAAMGRDIALKALVTDAIAALAEVDHLTVTPDTDLFANDKSNRLRTNRLLNRALVDELRQELDPYNVLSDYSIGIKLGQLILANYLGGKGELH
SIO_010081: CEP88_RS00300
subclass of: SO_0000673
so part of: CEP88_RS00300
location: 69880..70527
location: region:69880-70527:1
so has part: feature:69880-70527:1:exon

WP_011655460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69880-70527:1:exon

CEP88_RS00305
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00305
old locus tag: CEP88_00305
so part of: sequence
location: complement(70966..71553)
location: region:70966-71553:-1
so has part: feature:70966-71553:-1:exon
subclass of: SO_0000010

position:70966:-1
position: 70966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71553:-1
position: 71553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70966-71553:-1:exon

CEP88_RS00305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00305
old locus tag: CEP88_00305
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGWTCPHTPPRDERAEIERLVTFENEDRAMRPVLTTRKGSVWYLAVEVTLKTGTAEPHGYTVDALRRYVFAAVILTRRAQGEWCYKDMEESMGPCEAQAPHKLLDLLSPTTKDYALAWRERCKASARRSARKIAHGDTIQLAEPLTFNDGITRDTFTVQRERFAGARRITSRFLCKKTGMACRISRFMQREWVKL
SIO_010081: CEP88_RS00305
subclass of: SO_0000673
so part of: CEP88_RS00305
location: complement(70966..71553)
location: region:70966-71553:-1
so has part: feature:70966-71553:-1:exon

WP_011655458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70966-71553:-1:exon

CEP88_RS00310
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00310
old locus tag: CEP88_00310
so part of: sequence
location: complement(71553..72449)
location: region:71553-72449:-1
so has part: feature:71553-72449:-1:exon
subclass of: SO_0000010

position:72449:-1
position: 72449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71553-72449:-1:exon

CEP88_RS00310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00310
old locus tag: CEP88_00310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011536558.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zincin-like metallopeptidase domain-containing protein
translation: MTTERFDIKQHVTDTIIAQIEAGTPPWRKPWTGETGGACFPLRHNGDPYRGINVLMLWASATAQGFASARWMTFKQALDLGGCVRKGSKSTKSVYYGTFEQETEAANGEAETRQSRFAKSFSVFNADQIKGLPEDYYVRTEPPRDLGTEADPALEAFFAASGAQIITSADPRAYYCPQKDHVHMPPIATFYVAAGYYGSLAHEIGHYFLADHRIGTQKKFTTKAEYAVGELEAEIFSAFLAVHLGFEPHFDQSAAYVEGWLKALKEDKNAIFAAASQAQKAFDHILTVTQAAQQGEAA
SIO_010081: CEP88_RS00310
subclass of: SO_0000673
so part of: CEP88_RS00310
location: complement(71553..72449)
location: region:71553-72449:-1
so has part: feature:71553-72449:-1:exon

WP_011655457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71553-72449:-1:exon

CEP88_RS00315
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00315
old locus tag: CEP88_00315
so part of: sequence
location: complement(73262..74038)
location: region:73262-74038:-1
so has part: feature:73262-74038:-1:exon
subclass of: SO_0000010

position:73262:-1
position: 73262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74038:-1
position: 74038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73262-74038:-1:exon

CEP88_RS00315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00315
old locus tag: CEP88_00315
inference: COORDINATES: protein motif:HMM:NF024242.2
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MEQQHTLSPQQSSDINLPVHNRLRLLKLSRGDTWPERRLCELALVLECPPNGLAISDLETRLFEGELALLPLGNGLKAASSGRVLSLELERSLAPPKPQRLSDSLISQLMRRAWSSIFSTPQILEPTLELINVLADQRVRDHQEHLDLLTTIDHRIAVVIDYIDANCVNSLTVAKLAKMACMSPSRLSVRFKAATGETVWGYFQRRRCEKAHQLLSETSASVSDIAYQVGFSSQAHFTQSFKRRFNTTPGRFRQNAKK
SIO_010081: CEP88_RS00315
subclass of: SO_0000673
so part of: CEP88_RS00315
location: complement(73262..74038)
location: region:73262-74038:-1
so has part: feature:73262-74038:-1:exon

WP_105880233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73262-74038:-1:exon

CEP88_RS00325
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00325
old locus tag: CEP88_00325
so part of: sequence
location: 75093..75995
location: region:75093-75995:1
so has part: feature:75093-75995:1:exon
subclass of: SO_0000010

position:75093:1
position: 75093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75995:1
position: 75995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75093-75995:1:exon

CEP88_RS00325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00325
old locus tag: CEP88_00325
inference: COORDINATES: protein motif:HMM:NF024242.2
GO function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
translation: MSNQCVPSIANFYADPTSPYSAFQQEHRSGGSMPVRMFRAEQQAHELVDPAVPEVVLCLSLRSDMPFQWDIGDSWAKEQQMRSGDFDLVPPNTEARFRCRGDHEILMAAIPAGPLADLLDTHRKGPLSRLDTLTGRMLFRDEQLRRILMQMWTESARTGGASDLVFDGLTQVLIGRLLDKAGQQHQPQRVFALDQAAMTRIECFVEEQLAERITVETLASVLDMPRWTFADAFKATTGETPHAYVTTKRVERACDLLRLGDMPLAEIAYATGFASQSHMTDTFRRVLGTTPGKWRAESRN
SIO_010081: CEP88_RS00325
subclass of: SO_0000673
so part of: CEP88_RS00325
location: 75093..75995
location: region:75093-75995:1
so has part: feature:75093-75995:1:exon

WP_011655454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75093-75995:1:exon

CEP88_RS00330
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00330
old locus tag: CEP88_00330
so part of: sequence
location: complement(76075..76989)
location: region:76075-76989:-1
so has part: feature:76075-76989:-1:exon
subclass of: SO_0000010

position:76075:-1
position: 76075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76989:-1
position: 76989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76075-76989:-1:exon

CEP88_RS00330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00330
old locus tag: CEP88_00330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020041537.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MQDLKPLRVFLEVAAQESFVRAAKALNMTPATVTRIVAKLEEELDRQLLLRTTRHVSLTSYGALVAARYRPVVEAFDQVGEELTQDTQPFRGRLSINVPMSFGLRLMPGLIQSFRLAYPNIDLVVRMTDRLVDVMAEECDLAVRISNPPEDKSTIWRKVCEIPRKVVASKAFLDRTTRPEHPDQLDRNFCLSYGHDVEPESWPLHKAGMKNTFTAGTALVSNNGDVLLTMIQRDAGIVLLPEFIAADALKSETIEEVLPGWAVSSLWLSLYYPPYTTLPPLVEAFTDFFEAYLADIDGFNFEET
SIO_010081: CEP88_RS00330
subclass of: SO_0000673
so part of: CEP88_RS00330
location: complement(76075..76989)
location: region:76075-76989:-1
so has part: feature:76075-76989:-1:exon

WP_011655453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76075-76989:-1:exon

CEP88_RS00335
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00335
old locus tag: CEP88_00335
so part of: sequence
location: 77100..78029
location: region:77100-78029:1
so has part: feature:77100-78029:1:exon
subclass of: SO_0000010

position:77100:1
position: 77100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78029:1
position: 78029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77100-78029:1:exon

CEP88_RS00335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00335
old locus tag: CEP88_00335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007198997.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VOC family protein
translation: MEKHIKGLHHVTSMATDAQQNNAFFTQTLGMRRVKKTVNFDAPEVYHLYYGDEVGTPGSVMTYFPFGRMPNGTRGAGEVGVTEFAVPHGTLGYWKDRLSAQKVTGLAEDTFLGENRLSFDGPDGDGFALVETGPAGRTAWTGTDVPVDAGILGFNGARFRLRDAAATGELLGFMGYQKDETDGNVTRYRIEGGNAADTIDLEEIPGANAARQGGGSVHHIAFAVEDRAAQLEVRKALLDTGYQVTPVIDRDYFWAIYFQTPGGVLFEIATNEPGFDRDEDTANLGQALMLPDRYKPYRDKIEPRLPELS
SIO_010081: CEP88_RS00335
subclass of: SO_0000673
so part of: CEP88_RS00335
location: 77100..78029
location: region:77100-78029:1
so has part: feature:77100-78029:1:exon

WP_044033600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77100-78029:1:exon

CEP88_RS00340
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00340
old locus tag: CEP88_00340
so part of: sequence
location: 78041..78667
location: region:78041-78667:1
so has part: feature:78041-78667:1:exon
subclass of: SO_0000010

position:78041:1
position: 78041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78667:1
position: 78667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78041-78667:1:exon

CEP88_RS00340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00340
old locus tag: CEP88_00340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015887681.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta hydrolase
translation: MSTDTYTALTKVPEGDAPLVFAFHGTGGDEQQFFGLAQELLPGAGVVSPRGDVSEMGAARFFRRTGEGVYDMNDLTRATDKMAGFVEAWKAKHPGRPVFGFGYSNGANILASTMMARPDLFDRIALLHPLIPWSPDPAQGLAGKQVLVTAGRNDPIGPWPLTERLIKWVEAQGATVSTVVHAGGHELRAEEIDALRPFFEHTSVPLNA
SIO_010081: CEP88_RS00340
subclass of: SO_0000673
so part of: CEP88_RS00340
location: 78041..78667
location: region:78041-78667:1
so has part: feature:78041-78667:1:exon

WP_011655451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78041-78667:1:exon

CEP88_RS00345
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00345
old locus tag: CEP88_00345
so part of: sequence
location: 78766..79011
location: region:78766-79011:1
so has part: feature:78766-79011:1:exon
subclass of: SO_0000010

position:78766:1
position: 78766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79011:1
position: 79011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78766-79011:1:exon

CEP88_RS00345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00345
old locus tag: CEP88_00345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008280001.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1427 family protein
translation: MSWQPYAISLVVGLGVGVIYGLLTVRSPAPPIIALLGLLGMLAGEATVQWLRGHSSAVADALHLKSFSVATRHDEDENPKS
SIO_010081: CEP88_RS00345
subclass of: SO_0000673
so part of: CEP88_RS00345
location: 78766..79011
location: region:78766-79011:1
so has part: feature:78766-79011:1:exon

WP_011655450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78766-79011:1:exon

CEP88_RS00350
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00350
old locus tag: CEP88_00350
so part of: sequence
location: 79036..79743
location: region:79036-79743:1
so has part: feature:79036-79743:1:exon
subclass of: SO_0000010

position:79036:1
position: 79036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79743:1
position: 79743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79036-79743:1:exon

CEP88_RS00350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00350
old locus tag: CEP88_00350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019672972.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydrolase
translation: MSKTELLTPENSQVIFIDHQPQMAFAVNSIDGQTLKNNTVALAKSAKAFGIPTHITTVETEAFSGNTYPELLDVFPEAPLLERSSMNSWDDQKVRDALAKGAAEGRKKIIVSGLWTEVCNTTFALSVLNDTDYEIYMVSDASGGTTKEAHQNAMDRMVQAGAVPVTWQQVLLEWQRDWARRDTYDAVMEIVREHSGGYGMGVDYAYTMVHKAPSRSKHSGETLAPVPADKPLAAE
SIO_010081: CEP88_RS00350
subclass of: SO_0000673
so part of: CEP88_RS00350
location: 79036..79743
location: region:79036-79743:1
so has part: feature:79036-79743:1:exon

WP_011655449.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79036-79743:1:exon

CEP88_RS00355
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00355
old locus tag: CEP88_00355
so part of: sequence
location: 79810..81525
location: region:79810-81525:1
so has part: feature:79810-81525:1:exon
subclass of: SO_0000010

position:79810:1
position: 79810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81525:1
position: 81525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79810-81525:1:exon

CEP88_RS00355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00355
old locus tag: CEP88_00355
EC number: 3.5.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008197194.1
GO function: GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amidohydrolase
translation: MADTILFNGKIMTMDPDHPEASAVAMQDGLILEVGSDADILRLKSADTDVIDLGGQRVIPGLIDSHTHIIRQGNNFAMELRWDHVPSLADGLRMLKAQAERTPAGQWIRVVGGWSADQFAEKRLPTIDEINAVAPEVPVYVLHLYDRAWLNKAALRALGIDKHYYEPFVSGRLERDDQGNPTGLAMARPNAQPLYALLDMAPKLDFEQQVTSTKHYFRALNGLGLTSALDCAGGFLNYPDDYGVLTELNKRGEQSVRIGYQLFAQRPTLELDDFKRWNDIVKPDEGDDYLKCVGAGEMLVASAYDFEDFSYPRPDLPKRMEGDLRPVLEYLFENRWPIRFHCTYEESAHRLLKVVEEVGRDKGLEELNWIFDHGETVSEATMEWVARLGGGISYQNRIAFQTTAYRDRYGEAALNDVMPVKKMMASGVPLAAGTDATRVSSYNPWLAIHWAVSGKGRGGDVIWQAANRLSREEALRHWTSAGAWFSREQGKKGQIKAGQFADLAVLDRDYFAVPEDEIINLEADLTFTGGKVVHAKGPFASHAPADLPGLPDWSPVPMFGAPGAPKPSLVS
SIO_010081: CEP88_RS00355
subclass of: SO_0000673
so part of: CEP88_RS00355
location: 79810..81525
location: region:79810-81525:1
so has part: feature:79810-81525:1:exon

WP_074958842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79810-81525:1:exon

CEP88_RS00360
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
alternative label: pexB
gene: dps
locus tag: CEP88_RS00360
old locus tag: CEP88_00360
gene synonym: pexB
so part of: sequence
location: 81641..82144
location: region:81641-82144:1
so has part: feature:81641-82144:1:exon
subclass of: SO_0000010

position:81641:1
position: 81641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82144:1
position: 82144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81641-82144:1:exon

CEP88_RS00360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
alternative label: pexB
gene: dps
locus tag: CEP88_RS00360
old locus tag: CEP88_00360
gene synonym: pexB
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010504102.1
GO function: GO:0016722 - oxidoreductase activity, acting on metal ions [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA starvation/stationary phase protection protein Dps
translation: MRHTRLKLADNTRKTAIDLLQRTLADAIDLRLAVKQAHWTIRDPRFQQLHEFFDSLVEPLDEEIDTMAERIATLGGVPDGRAIAVGQSSRLDPYGTDVVSGDDHLEALADRFATLGNHVRESIDLADEAGDADTADIFTSASRYLDKTVWFLEAHLSNDASGLKAAS
SIO_010081: CEP88_RS00360
subclass of: SO_0000673
so part of: CEP88_RS00360
location: 81641..82144
location: region:81641-82144:1
so has part: feature:81641-82144:1:exon

WP_011655446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81641-82144:1:exon

CEP88_RS00365
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00365
old locus tag: CEP88_00365
so part of: sequence
location: 82204..82503
location: region:82204-82503:1
so has part: feature:82204-82503:1:exon
subclass of: SO_0000010

position:82204:1
position: 82204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82503:1
position: 82503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82204-82503:1:exon

CEP88_RS00365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00365
old locus tag: CEP88_00365
EC number: 2.3.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008887738.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MSDIEITRTDTDSKARYGATIAGVEGEGELTISKVSDSLIIADHTGVPDSMRGMGVAGALVDRLLADARAAGQRIVPLCPFVRAYAQKHREEVADVIQW
SIO_010081: CEP88_RS00365
subclass of: SO_0000673
so part of: CEP88_RS00365
location: 82204..82503
location: region:82204-82503:1
so has part: feature:82204-82503:1:exon

WP_011655445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82204-82503:1:exon

CEP88_RS00370
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00370
old locus tag: CEP88_00370
so part of: sequence
location: 82487..84085
location: region:82487-84085:1
so has part: feature:82487-84085:1:exon
subclass of: SO_0000010

position:82487:1
position: 82487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84085:1
position: 84085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82487-84085:1:exon

CEP88_RS00370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00370
old locus tag: CEP88_00370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011299030.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MSSSGSTVEAPSPGAFSSFGHMAFALLWTATLISNVGTWMHDVGAGWLMTTLNSSPSVVTLVQAATTLPVFLFALFAGALADRLDKRRMLITINILLTIVISTLTVLVWLEMMTPLLLILFTLAIGTGAAFMAPAWQAIVPQLVPREKLKPAIALNSMGINISRAIGPALAGILIASVGLAAPFALNAVSHLVIIVALLLWKPEPTTGTKYHGPILGDMATGLRHVRNNEALKATAIRAGAFFIFASAYWSLLPLIARQAEGGGSQLYGTLVALIGGGAVTGALLLPRLQKRLDSDMAVRAGTLGTIAALLIMALSATPVALMAAAFLGGFSWITVLTSFNVSAQMALPNWVRARGLAVFLMVFFGSMAAGSIIWGQVATATSIPVALMIAAAGLALGILVTRGFKVGQAENADLTPSALWPSAPVLSDGQYPDQRAMVMVEYQVNADRKADFLAALHAFSKERLRDGATQWFVHESVETPGLWIESFLLPSWSEHLEQHQRVTRDDADVQDRLRAFDTRETGPVVRHYISP
SIO_010081: CEP88_RS00370
subclass of: SO_0000673
so part of: CEP88_RS00370
location: 82487..84085
location: region:82487-84085:1
so has part: feature:82487-84085:1:exon

WP_011655444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82487-84085:1:exon

CEP88_RS00375
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00375
old locus tag: CEP88_00375
so part of: sequence
location: 84170..84622
location: region:84170-84622:1
so has part: feature:84170-84622:1:exon
subclass of: SO_0000010

position:84170:1
position: 84170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84622:1
position: 84622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84170-84622:1:exon

CEP88_RS00375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00375
old locus tag: CEP88_00375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015242302.1
GO function: GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: (2Fe-2S)-binding protein
translation: MINFTLNGRSVEVDNPEDELLLLVIRDELGLKGTKYGCGAAMCGACTVHVDGEPEFSCQLSVGDVAGYEVTTIEGLSEDASHPLQKAWIDQQVPQCGYCQSGQIMRAAALLSENPDPSRAEIAEYMAPNLCRCGTYNRIFKAVEQAAQEV
SIO_010081: CEP88_RS00375
subclass of: SO_0000673
so part of: CEP88_RS00375
location: 84170..84622
location: region:84170-84622:1
so has part: feature:84170-84622:1:exon

WP_011655443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84170-84622:1:exon

CEP88_RS00380
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00380
old locus tag: CEP88_00380
so part of: sequence
location: 84624..86813
location: region:84624-86813:1
so has part: feature:84624-86813:1:exon
subclass of: SO_0000010

position:84624:1
position: 84624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86813:1
position: 86813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84624-86813:1:exon

CEP88_RS00380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00380
old locus tag: CEP88_00380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008193986.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdopterin-dependent oxidoreductase
translation: MTTTSNLSRRSVLKGGAGLFFAVGAGGVSAVSALAQANTGLAVNPWLSIASDGVIKIVFPSTEMGQSSYSTLPQILAEELDANWDDVVIEQLNADDRTFGNPLFGGVLYTAGSTGVQSYYDPMRRAGAQARDVLLQIAARELGVPKESLHTEPSAVVAEDGTQLSYGNLAAAGTTGVDIPSADSLALKDPQDFRIIGQDIPRRDVPAKSTGNAQYAIDVELDNMAHATVLRAPVEGETPLTLDDTDARAVNGVFDIVTLPDGVAVVAESLWAALGARSLLQVEWSTTSPARGFNSEATLEAYAAAAQDAQSEPAIWAERGDAPSAIANAERQISHLYLSDYAYHAQIEPMAAVASVDADGLGAEVWAGTQTQSWTTQTVMQTLGTTQDRVRLNMMTMGGSFGRRTAFVQEYVRDALLCSKAVGRPVKVTWTREDDVKNGTFRPAAAQHLEAGLTADGRLSGWHHKVATPSVIGFFNPGRWEAVKPNDVISMRGAESKFYTIPDFRADHIITERDARLAPYRGIGAAYTSFAAEAFMDELSEAAGRDPLDFRLDLVAENPRGRHLLEKVAEMSDWRNRGTRALGLSFAGYSSSMAAGVAEIEVDESSGDIRVKHVWAAVDAGRIVSPDNAHNQIEGGIIFGLSMALTEKIDIENGEVVQNNFWDYEITRADRVPPIDIYMAEVDAPPVGVGEVGTPMVSAAIANAFYAAKGRRLRHMPFTRERVNAAIQT
SIO_010081: CEP88_RS00380
subclass of: SO_0000673
so part of: CEP88_RS00380
location: 84624..86813
location: region:84624-86813:1
so has part: feature:84624-86813:1:exon

WP_011655442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84624-86813:1:exon

CEP88_RS00385
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00385
old locus tag: CEP88_00385
so part of: sequence
location: 86926..87519
location: region:86926-87519:1
so has part: feature:86926-87519:1:exon
subclass of: SO_0000010

position:86926:1
position: 86926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87519:1
position: 87519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86926-87519:1:exon

CEP88_RS00385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00385
old locus tag: CEP88_00385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013960776.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidine phosphatase family protein
translation: MTQLKISRRSALAGSLSALLFGVPKAARAEVLGRLRAGGHVIYFRHAATTWSGVDRVEWPRARQRLLSEEGIRQSEIIGAAFRDLQIPVGEVLASPFARCRDMAEIAFGRVEERMALIGLLSDEAGRDERAAFLRSLLADRPTDGTNRVVVAHRSNIERVAGARLAEGEAVILNPDGQGAFDVGQTLMPDEWGALAV
SIO_010081: CEP88_RS00385
subclass of: SO_0000673
so part of: CEP88_RS00385
location: 86926..87519
location: region:86926-87519:1
so has part: feature:86926-87519:1:exon

WP_105880239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86926-87519:1:exon

CEP88_RS00390
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00390
old locus tag: CEP88_00390
so part of: sequence
location: 87598..88560
location: region:87598-88560:1
so has part: feature:87598-88560:1:exon
subclass of: SO_0000010

position:87598:1
position: 87598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88560:1
position: 88560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87598-88560:1:exon

CEP88_RS00390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00390
old locus tag: CEP88_00390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009817772.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pirin family protein
translation: MSWNPTQKPDCPNSSLDSLETLIIPRARDLGGFEVRRALPSPKRQMVGPFIFFDQMGPAEFITDGGIDVRPHPHIGLGTVTYLYEGEFEHRDSVGTHQMIYPGEVNWMTAGRGVTHSERTSPETRASRHKLFGIQTWIALPEKDEDMAPDFEHHKKEALPEINDTGLHAKLILGTAYGETSPVTMQLETFYLDVVLQPGAHFPLPDNHEDRGLYITQGSVEIAGEVFEAGRMMVFRPGDRISVRAGEQGARLMALGGETMNESRFIWWNFVSSSRDRIEEAKEAWKTADWENGPFRLPPGDDAEFIPISKKLEETMPKAE
SIO_010081: CEP88_RS00390
subclass of: SO_0000673
so part of: CEP88_RS00390
location: 87598..88560
location: region:87598-88560:1
so has part: feature:87598-88560:1:exon

WP_011655440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87598-88560:1:exon

CEP88_RS00395
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00395
old locus tag: CEP88_00395
so part of: sequence
location: complement(89289..90491)
location: region:89289-90491:-1
so has part: feature:89289-90491:-1:exon
subclass of: SO_0000010

position:89289:-1
position: 89289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90491:-1
position: 90491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89289-90491:-1:exon

CEP88_RS00395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00395
old locus tag: CEP88_00395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008232186.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: multidrug effflux MFS transporter
translation: MYRPKTPPHLITLILLTGFSPMSLNMFLPSLANIAVDLETDYGTVSWAVSGYLAITAIIQLIIGPLSDRIGRRPVLLGALLVFAFASVGCALAQSVEVFLFSRILQGGIIGGYALSLAIVRDTRSEREAVSLIGYIGMTMAIAPLVGPMLGGVLDTFLGWRSIFAFYAVSGFGLFALCWLDLGETKTRSNSDTGMPVPGTTTLMREPLFWAYALCGTFSVGAFYIFLTGAPLVAQSVFDITTAELGFYIGTITVGFMLGGFIAGRFGKGFEPTTMMIAGRIIACIGLVGGLIVLAYGITSPQIFFASTIFVGLGNGITMPGSNAGAMSVRPDLAGSAAGLSGALIVAGGATLTAATGTAVTETNGAQTLLTLMLVASGLGLGFAIWASWLRQRAAQCPNE
SIO_010081: CEP88_RS00395
subclass of: SO_0000673
so part of: CEP88_RS00395
location: complement(89289..90491)
location: region:89289-90491:-1
so has part: feature:89289-90491:-1:exon

WP_011655439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89289-90491:-1:exon

CEP88_RS20415
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS20415
so part of: sequence
location: complement(91261..91581)
location: region:91261-91581:-1
so has part: feature:91261-91581:-1:exon
subclass of: SO_0000010

position:91261:-1
position: 91261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91581:-1
position: 91581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91261-91581:-1:exon

CEP88_RS20415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS20415
inference: COORDINATES: protein motif:HMM:NF017128.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF736 family protein
translation: MAIDGQITRTDDDAFTGWIASLTFDVDIVLTQNPYKKEDKHPDFEITTKTPRNREIRIGSAWEQTSKAGNDYLSLSVMVNGQQVRVNALRGKDDPEGTYRLVPLAG
SIO_010081: CEP88_RS20415
subclass of: SO_0000673
so part of: CEP88_RS20415
location: complement(91261..91581)
location: region:91261-91581:-1
so has part: feature:91261-91581:-1:exon

WP_050759153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91261-91581:-1:exon

CEP88_RS00405
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00405
old locus tag: CEP88_00410
so part of: sequence
location: complement(92586..93002)
location: region:92586-93002:-1
so has part: feature:92586-93002:-1:exon
subclass of: SO_0000010

position:92586:-1
position: 92586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93002:-1
position: 93002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92586-93002:-1:exon

CEP88_RS00405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00405
old locus tag: CEP88_00410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007692755.1
GO function: GO:0004540 - ribonuclease activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MFIDASAIVAIINEEPGSDEIVRRIEDHKGQRFVSPLVRFEVVAAVARSRSGATRPTSEQCETAEKTVDAFCASIGAKDITITPSVGAKALMAARTYGKMVGHEADLNFGDCFAYACARAYNARLVYKGNDFLKTDMA
SIO_010081: CEP88_RS00405
subclass of: SO_0000673
so part of: CEP88_RS00405
location: complement(92586..93002)
location: region:92586-93002:-1
so has part: feature:92586-93002:-1:exon

WP_011655434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92586-93002:-1:exon

CEP88_RS00410
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00410
old locus tag: CEP88_00415
so part of: sequence
location: complement(93002..93247)
location: region:93002-93247:-1
so has part: feature:93002-93247:-1:exon
subclass of: SO_0000010

position:93247:-1
position: 93247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93002-93247:-1:exon

CEP88_RS00410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00410
old locus tag: CEP88_00415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013896367.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapB family antitoxin
translation: MALYIRDETVDDLAKQVMKATGAINKTEAVRAALKAQLVAETQKKPLLERINEVRAMADTIGAPDPDFDMKTYTDEMWGDG
SIO_010081: CEP88_RS00410
subclass of: SO_0000673
so part of: CEP88_RS00410
location: complement(93002..93247)
location: region:93002-93247:-1
so has part: feature:93002-93247:-1:exon

WP_011655433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93002-93247:-1:exon

CEP88_RS20535
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS20535
so part of: sequence
location: complement(93391..93900)
location: region:93391-93900:-1
so has part: feature:93391-93900:-1:exon
subclass of: SO_0000010

position:93391:-1
position: 93391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93900:-1
position: 93900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93391-93900:-1:exon

CEP88_RS20535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS20535
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVPSPIRAVWKTAELMIAFHKNKKKERRDEPYLWRPKDAIARLLSKPEDQEAFIVLKGHEDAADVQIKLHPDKMIIRRDHVLGWSGIVIDDHSVKVLVDDDWIRIDHDGAVKIERDAETTYLEGDGSIIRTSPDAEIMISSDGQSMSRRTGEQLDAFTPEGFISRKRS
SIO_010081: CEP88_RS20535
subclass of: SO_0000673
so part of: CEP88_RS20535
location: complement(93391..93900)
location: region:93391-93900:-1
so has part: feature:93391-93900:-1:exon

WP_011655432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93391-93900:-1:exon

CEP88_RS00420
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00420
old locus tag: CEP88_00425
so part of: sequence
location: complement(93983..94246)
location: region:93983-94246:-1
so has part: feature:93983-94246:-1:exon
subclass of: SO_0000010

position:93983:-1
position: 93983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94246:-1
position: 94246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93983-94246:-1:exon

CEP88_RS00420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00420
old locus tag: CEP88_00425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010400636.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIDFTAYRHPVLAVACPECGKRAGAWCIRPSGHTAMDLHRSRKAEADRVFIDQHGPDASIERVQDSWAIDPQGRAHIRPQPEQLALF
SIO_010081: CEP88_RS00420
subclass of: SO_0000673
so part of: CEP88_RS00420
location: complement(93983..94246)
location: region:93983-94246:-1
so has part: feature:93983-94246:-1:exon

WP_044033578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93983-94246:-1:exon

CEP88_RS00425
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00425
old locus tag: CEP88_00430
so part of: sequence
location: complement(94243..95079)
location: region:94243-95079:-1
so has part: feature:94243-95079:-1:exon
subclass of: SO_0000010

position:94243:-1
position: 94243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95079:-1
position: 95079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94243-95079:-1:exon

CEP88_RS00425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00425
old locus tag: CEP88_00430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012115011.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MWPGVSEPVEGAHLRVLSLGAGVQSTTLALMAAHGEIGPMPDAAIFADAGWEPAGVMEHLNWLKGANVLPYPIHHVQAIDLRAAITARAAGDEGRFVSIPYFLANGGMGRRQCTNEAKIVPVRREIRRLLGLKPRQHATGFKVEQWIGFSTDEMQRMAVSRDKWITNRFPLIERRMSRGDCHAWLDRHGYPCPPKSACIGCPYRSDERWKQMRDHDPVSFAEAVALDHGLRAGGTNGAMQHQEFMHRSCVPLAEVDFDARTGGAQASFLDQCGGVCGT
SIO_010081: CEP88_RS00425
subclass of: SO_0000673
so part of: CEP88_RS00425
location: complement(94243..95079)
location: region:94243-95079:-1
so has part: feature:94243-95079:-1:exon

WP_011655429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94243-95079:-1:exon

CEP88_RS00430
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00430
old locus tag: CEP88_00435
so part of: sequence
location: complement(95079..95420)
location: region:95079-95420:-1
so has part: feature:95079-95420:-1:exon
subclass of: SO_0000010

position:95420:-1
position: 95420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95079-95420:-1:exon

CEP88_RS00430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00430
old locus tag: CEP88_00435
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAFENNTNLGRVDTILKTLRLIEKSAASNRATDAQIRAVLAPLLEALARYRAANDAPENTSPVATLEDTLTAGQRAALHLADRASTRDLIAALLGRLEAQQARIDTTDNGRAS
SIO_010081: CEP88_RS00430
subclass of: SO_0000673
so part of: CEP88_RS00430
location: complement(95079..95420)
location: region:95079-95420:-1
so has part: feature:95079-95420:-1:exon

WP_011655428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95079-95420:-1:exon

CEP88_RS00435
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00435
old locus tag: CEP88_00440
so part of: sequence
location: complement(95520..97415)
location: region:95520-97415:-1
so has part: feature:95520-97415:-1:exon
subclass of: SO_0000010

position:95520:-1
position: 95520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97415:-1
position: 97415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95520-97415:-1:exon

CEP88_RS00435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00435
old locus tag: CEP88_00440
inference: COORDINATES: protein motif:HMM:TIGR00180.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MTKKSQSEMTQGTLKSLALSSLSLSPLNPRQEVPDEDVASLAESIKTVGLIQPIAGLETKDGVEIVAGGRRLRALRLAAADLGQDEATYLVNVTVTTDAAQAQSWASTENVNRKNLHPAQEVRAYADMIQSGSDESTVAKAFGVTVRHVKGRMKLAVLPTVILDALRADEITLDVAAAYTVADTTEQAAEVFERLNGGWMGDQLHSIRSELTQDAADGDGKLATFVGRAAYEAAGGAVTEDLFGEDVYFTDSEIVQQLADAKLAEAAEALKGEGWLWVETAYEQPSYEVTQKMGRAYAQPVAPSEDQQARYDALADIVETDTATEAEMAEFDALEEAMEQKAYTEDQKRLAGVFLYITYHGELGATYGMIRPENRKEAEDAGICAKNAHHTSYSAAEKPKSAYSAALTADLARVRTCAVQTALLDKPELALDLVTFALVQSMYDSPIGISTTQPRNTPDDDAGLTVDARIAHEYETPIRAKPAAEKFAAFRALPKKERNAALTGEVAKLMQATLADHAQNPLIEMVATLAGANVRAVWTPSEAFLNRLKADQLIEAMAFILGEAPQKSFTSLKKGEKAARLAAIFAGKKGIPPLSAEQKRRAEAWVPDGMATAPAVTPKTAKPAKAKKAAA
SIO_010081: CEP88_RS00435
subclass of: SO_0000673
so part of: CEP88_RS00435
location: complement(95520..97415)
location: region:95520-97415:-1
so has part: feature:95520-97415:-1:exon

WP_011655427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95520-97415:-1:exon

CEP88_RS00440
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00440
old locus tag: CEP88_00445
so part of: sequence
location: complement(97670..98005)
location: region:97670-98005:-1
so has part: feature:97670-98005:-1:exon
subclass of: SO_0000010

position:97670:-1
position: 97670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98005:-1
position: 98005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97670-98005:-1:exon

CEP88_RS00440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00440
old locus tag: CEP88_00445
inference: COORDINATES: protein motif:HMM:NF018871.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1419 domain-containing protein
translation: MALKFTSIHEGVADRAKSFDLINRGYGPDQRFAGQWFETTEDVYTYFLEVLPPLDWTADGFSMSEFATGFLTDAYLRINGRFFCLCIHRERAMDFTNTLRAFKATAPANAA
SIO_010081: CEP88_RS00440
subclass of: SO_0000673
so part of: CEP88_RS00440
location: complement(97670..98005)
location: region:97670-98005:-1
so has part: feature:97670-98005:-1:exon

WP_011655426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97670-98005:-1:exon

CEP88_RS00445
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00445
old locus tag: CEP88_00450
so part of: sequence
location: 98655..99218
location: region:98655-99218:1
so has part: feature:98655-99218:1:exon
subclass of: SO_0000010

position:98655:1
position: 98655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99218:1
position: 99218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98655-99218:1:exon

CEP88_RS00445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00445
old locus tag: CEP88_00450
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSIKTHFFSAVGGMIAAAGLVIGWLQLESDKSLYDISEESIQSTDDLNDAITALTQVVREQDVIIDPDGLETLNEKLTELSSTLAQGTGDELTASSIGRVFEGVHRVPYQETILLTASNGESKPFRFDDAEERRGLAIFQIDGNKRTTTEGRIQSLKFGSADCELLFVKIDAAATPPILDIRLTCDE
SIO_010081: CEP88_RS00445
subclass of: SO_0000673
so part of: CEP88_RS00445
location: 98655..99218
location: region:98655-99218:1
so has part: feature:98655-99218:1:exon

WP_011655425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98655-99218:1:exon

CEP88_RS00450
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00450
old locus tag: CEP88_00455
so part of: sequence
location: 99349..99771
location: region:99349-99771:1
so has part: feature:99349-99771:1:exon
subclass of: SO_0000010

position:99349:1
position: 99349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99771:1
position: 99771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99349-99771:1:exon

CEP88_RS00450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00450
old locus tag: CEP88_00455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007815827.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nuclease
translation: MKALLVAAASFFLMSLAPTHAAETVTGKVTKVRDADTIVVHGVAVRLNGVDVPENGTQAGNQATAAMKRYLRGMTITCELNGERTHDRWVGVCFTQEGHDIGAVLIASGFALDCARYSGGRYRNLEPAGARSRLRQARYC
SIO_010081: CEP88_RS00450
subclass of: SO_0000673
so part of: CEP88_RS00450
location: 99349..99771
location: region:99349-99771:1
so has part: feature:99349-99771:1:exon

WP_011655424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99349-99771:1:exon

CEP88_RS00455
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00455
old locus tag: CEP88_00460
so part of: sequence
location: complement(99785..99982)
location: region:99785-99982:-1
so has part: feature:99785-99982:-1:exon
subclass of: SO_0000010

position:99785:-1
position: 99785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99982:-1
position: 99982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99785-99982:-1:exon

CEP88_RS00455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00455
old locus tag: CEP88_00460
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFDVPDDPELRQMINEDYQTFIRAAEEYINCLEAEQRRAFDKTNAILKRYLQSFGSDAALQSTIN
SIO_010081: CEP88_RS00455
subclass of: SO_0000673
so part of: CEP88_RS00455
location: complement(99785..99982)
location: region:99785-99982:-1
so has part: feature:99785-99982:-1:exon

WP_105880236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99785-99982:-1:exon

CEP88_RS00460
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00460
old locus tag: CEP88_00465
so part of: sequence
location: complement(100104..100652)
location: region:100104-100652:-1
so has part: feature:100104-100652:-1:exon
subclass of: SO_0000010

position:100104:-1
position: 100104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100652:-1
position: 100652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100104-100652:-1:exon

CEP88_RS00460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00460
old locus tag: CEP88_00465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013959856.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRTISAAIAAMAFIGGSSAASAQSYDMDCKVILCMAGGFPAGCGDAYSYMIDRITDFPHPKPPFGTCTQSDGTTYRAVDAPYDYLSRTQRAGWACPSTHRLRFSSTDQDHGSVNVDAFCYTDTRVVGSRDERTTQYVGRIPAQHVNFQVQITVEPGTPSAYRSPLYRLNYHTGFVTPSVGG
SIO_010081: CEP88_RS00460
subclass of: SO_0000673
so part of: CEP88_RS00460
location: complement(100104..100652)
location: region:100104-100652:-1
so has part: feature:100104-100652:-1:exon

WP_050759152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100104-100652:-1:exon

CEP88_RS00465
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00465
old locus tag: CEP88_00470
so part of: sequence
location: complement(100845..101426)
location: region:100845-101426:-1
so has part: feature:100845-101426:-1:exon
subclass of: SO_0000010

position:100845:-1
position: 100845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101426:-1
position: 101426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100845-101426:-1:exon

CEP88_RS00465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00465
old locus tag: CEP88_00470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009309957.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MSRVFAYARVSTSEQSVEPQVMEIQKAGFDILEHRIVSEKVSGSVEAARRKEFAKLLDKLEPGDTLVVTKLDRLGRNMIDVAGTIEALKDRQVKLHCLALSGTDLTSASGTMMVSVIAAAAQFERDLLIERTQAGLANAKAKGKVLGRRPALDAETRARVVQDHQKLQNISAVAKKYHVSRATIHRILASENA
SIO_010081: CEP88_RS00465
subclass of: SO_0000673
so part of: CEP88_RS00465
location: complement(100845..101426)
location: region:100845-101426:-1
so has part: feature:100845-101426:-1:exon

WP_011655421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100845-101426:-1:exon

CEP88_RS00470
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
gene: istA
locus tag: CEP88_RS00470
old locus tag: CEP88_00475
pseudo: true
so part of: sequence
location: 101754..>102395
location: region:101754-102395:1
so has part: feature:101754-102395:1:exon
subclass of: SO_0000010

position:101754:1
position: 101754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102395:1
position: 102395
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101754-102395:1:exon

CEP88_RS00470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
gene: istA
locus tag: CEP88_RS00470
old locus tag: CEP88_00475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_052096176.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21 family transposase
SIO_010081: CEP88_RS00470
subclass of: SO_0000673
so part of: CEP88_RS00470
location: 101754..>102395
location: region:101754-102395:1
so has part: feature:101754-102395:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:101754-102395:1:exon

CEP88_RS00475
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00475
old locus tag: CEP88_00480
so part of: sequence
location: complement(102652..103338)
location: region:102652-103338:-1
so has part: feature:102652-103338:-1:exon
subclass of: SO_0000010

position:102652:-1
position: 102652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103338:-1
position: 103338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102652-103338:-1:exon

CEP88_RS00475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00475
old locus tag: CEP88_00480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018240503.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thermonuclease family protein
translation: MKFLRPVSFAALMLFLSISAVHAELQSIRITGEVSVFDGDTIEIGPVLLRLHGIDAPENGQKCATADGGVWRCGAAASNKMVEFITGKALDCNPLERDPYGRIIARCMANGEDLGAMMVREGLAWAFLEYSAEYAELETTAKASGLNVWQAKTQTPWDYRDDKWNRAVEARPDGCPIKGNIGAGKAKIYHTPWSPNYGTTKIDKTKGELWFCTEAEALAAGWAAQRSK
SIO_010081: CEP88_RS00475
subclass of: SO_0000673
so part of: CEP88_RS00475
location: complement(102652..103338)
location: region:102652-103338:-1
so has part: feature:102652-103338:-1:exon

WP_074958810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102652-103338:-1:exon

CEP88_RS00480
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00480
old locus tag: CEP88_00485
so part of: sequence
location: 103597..105525
location: region:103597-105525:1
so has part: feature:103597-105525:1:exon
subclass of: SO_0000010

position:103597:1
position: 103597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105525:1
position: 105525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103597-105525:1:exon

CEP88_RS00480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00480
old locus tag: CEP88_00485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009468356.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PhoX family phosphatase
translation: MTLDTKTNLSADELEDLSFDDFDEAINPRPENNDFDAVVEQAISRRGFMGGVLSLGGVTALGAATTALTPISARAAENRFGFTAIAASTEDTITVPDGYNWHVATRWGDPLFSDVPEFDHATRGTAASQARAFGDNNDGMAIFTDKDGHQILVANNEYTNRSVIWGNNPEGKYVSDDDILKGKNAHGLTAAELKEVDGKWQIVKDSPYNRRFTPDEPMDITGPARGHALMQTNADPTGETVLGTFNNCGNGRTPWGTYLACEENFNGYFGTSDADGYEQDAGKKRYGVSGKDRGYGWWKIDDRFDVVKEPNEANRHGYITEVDPYDPTSKPKKRTALGRFKHENAEVVVNFDGRIAIYMGDDERGEFLYRYVSDGYYAEGGNTDALMENGTIYAAKFEADGTGKWLALTPEATGMDKAMICIQTRMAASAVGATTMDRPEWVTANPLKAEVYCALTNNKNRGIKPNAGGDETPVGGPNPREANKYGQIVRWWPSNGDHTADTFKWDLFVMAGNPTVHQDMNGGSTNVNEGNMFNSPDGLSFDNKGLLWIQTDGNYSNEEDFAGQGNNQMLIGDPATGEIRRFLVGPREAEITGISWSADRRTVFVGVQHPGERGDSNWPDGGDKTPRSSIIAVRRDDGAVIG
SIO_010081: CEP88_RS00480
subclass of: SO_0000673
so part of: CEP88_RS00480
location: 103597..105525
location: region:103597-105525:1
so has part: feature:103597-105525:1:exon

WP_011655418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103597-105525:1:exon

CEP88_RS00485
type: Gene
subclass of: SO_0000704
RO_0002162: 2434
locus tag: CEP88_RS00485
old locus tag: CEP88_00490
so part of: sequence
location: 105596..106282
location: region:105596-106282:1
so has part: feature:105596-106282:1:exon
subclass of: SO_0000010

position:105596:1
position: 105596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106282:1
position: 106282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105596-106282:1:exon

CEP88_RS00485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2434
locus tag: CEP88_RS00485
old locus tag: CEP88_00490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019013976.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zincin-like metallopeptidase domain-containing protein
translation: MMFTCLENFVASEVPLPVICRFANVAMASVCHLKTDFAALSAKLELHSYSVFTVDQIDGLPECCYTKPEPVIDPAERIEHADRFFAETGADIRHGGNRAYYPGASDYVQVPVLESFRSPEAYCTTLAHELTHWTKHRSRLDREFGRKKWGDEGYAREELGGAFLCADLAITPEPGEDHAAYIQGWLKVLKNDKRAIFAAAAHAQRATDYLCQMQPSAEEEKHNNRAAA
SIO_010081: CEP88_RS00485
subclass of: SO_0000673
so part of: CEP88_RS00485
location: 105596..106282
location: region:105596-106282:1
so has part: feature:105596-106282:1:exon

WP_245897136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105596-106282:1:exon