Rhizobium daejeonense strain KACC 13094 plasmid unnamed3, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
Genome sequence of Rhizobium daejeonense KACC 13094
Submitted (09-JAN-2020) Agriculture & Life Science, Kyungpook National University, Daehak-ro 80, Daegu 41566, Korea, Republic of
REFSEQ INFORMATION: The reference sequence is identical to\nCP048426.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 2020-01-09\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 114.0x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/06/2023 01:57:08\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,885\nCDSs (total) :: 4,813\nGenes (coding) :: 4,745\nCDSs (with protein) :: 4,745\nGenes (RNA) :: 72\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 56\nncRNAs :: 4\nPseudo Genes (total) :: 68\nCDSs (without protein) :: 68\nPseudo Genes (ambiguous residues) :: 0 of 68\nPseudo Genes (frameshifted) :: 34 of 68\nPseudo Genes (incomplete) :: 48 of 68\nPseudo Genes (internal stop) :: 15 of 68\nPseudo Genes (multiple problems) :: 24 of 68\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003567609.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014538095.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010513474.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013078937.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020813488.1
GO:0004397 - histidine ammonia-lyase activity [Evidence IEA]
GO:0006548 - histidine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003504148.1
GO:0006629 - lipid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018329142.1
PhnD/SsuA/transferrin family substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018323970.1
COORDINATES: similar to AA sequence:RefSeq:WP_012649115.1
COORDINATES: similar to AA sequence:RefSeq:WP_007604560.1
COORDINATES: similar to AA sequence:RefSeq:WP_012655055.1
COORDINATES: similar to AA sequence:RefSeq:WP_011578980.1
COORDINATES: similar to AA sequence:RefSeq:WP_018012995.1
COORDINATES: similar to AA sequence:RefSeq:WP_007826926.1
COORDINATES: similar to AA sequence:RefSeq:WP_018246732.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_018483061.1
COORDINATES: similar to AA sequence:RefSeq:WP_018483062.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018064670.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018012633.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012650336.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0000976 - transcription cis-regulatory region binding [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]; GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006467492.1
COORDINATES: similar to AA sequence:RefSeq:WP_003575608.1
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018448545.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019200 - carbohydrate kinase activity [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006315776.1
GO:0016857 - racemase and epimerase activity, acting on carbohydrates and derivatives [Evidence IEA]
GO:0019301 - rhamnose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007596622.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007596623.1
COORDINATES: similar to AA sequence:RefSeq:WP_020812006.1
COORDINATES: similar to AA sequence:RefSeq:WP_015342605.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0033296 - rhamnose binding [Evidence IEA]; GO:0015153 - rhamnose transmembrane transporter activity [Evidence IEA]
GO:0015762 - rhamnose transmembrane transport [Evidence IEA]
rhamnose ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011655152.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: similar to AA sequence:RefSeq:WP_003507003.1
bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_018246535.1
GO:0008740 - L-rhamnose isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010972717.1
COORDINATES: similar to AA sequence:RefSeq:WP_003509618.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
MarR family winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_010972715.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_006311978.1
COORDINATES: similar to AA sequence:RefSeq:WP_003509624.1
peptide ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_010972712.1
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003576216.1
COORDINATES: similar to AA sequence:RefSeq:WP_003517689.1
COORDINATES: similar to AA sequence:RefSeq:WP_003509631.1
COORDINATES: similar to AA sequence:RefSeq:WP_018067740.1
GO:0030246 - carbohydrate binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018067739.1
COORDINATES: similar to AA sequence:RefSeq:WP_008126484.1
COORDINATES: similar to AA sequence:RefSeq:WP_018067737.1
COORDINATES: similar to AA sequence:RefSeq:WP_008885819.1
COORDINATES: similar to AA sequence:RefSeq:WP_010112008.1
COORDINATES: similar to AA sequence:RefSeq:WP_018067734.1
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: similar to AA sequence:RefSeq:WP_008936750.1
COORDINATES: similar to AA sequence:RefSeq:WP_019529316.1
saccharopine dehydrogenase NADP-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019861951.1
GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019529325.1
COORDINATES: similar to AA sequence:RefSeq:WP_013892335.1
COORDINATES: similar to AA sequence:RefSeq:WP_013945740.1
COORDINATES: similar to AA sequence:RefSeq:WP_008873519.1
COORDINATES: similar to AA sequence:RefSeq:WP_013892338.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019861943.1
COORDINATES: similar to AA sequence:RefSeq:WP_014057878.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0019808 - polyamine binding [Evidence IEA]
GO:0015846 - polyamine transport [Evidence IEA]
spermidine/putrescine ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: similar to AA sequence:RefSeq:WP_008145694.1
COORDINATES: similar to AA sequence:RefSeq:WP_012555808.1
COORDINATES: similar to AA sequence:RefSeq:WP_017451151.1
COORDINATES: similar to AA sequence:RefSeq:WP_017451152.1
COORDINATES: protein motif:HMM:NF012655.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007198834.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013066359.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_008878431.1
COORDINATES: similar to AA sequence:RefSeq:WP_017263536.1
COORDINATES: similar to AA sequence:RefSeq:WP_012650478.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004119862.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858028.1
COORDINATES: similar to AA sequence:RefSeq:WP_010875046.1
COORDINATES: similar to AA sequence:RefSeq:WP_015342951.1
COORDINATES: similar to AA sequence:RefSeq:WP_004207388.1
COORDINATES: similar to AA sequence:RefSeq:WP_015921724.1
COORDINATES: similar to AA sequence:RefSeq:WP_019962785.1
COORDINATES: similar to AA sequence:RefSeq:WP_006330881.1
COORDINATES: similar to AA sequence:RefSeq:WP_018426925.1
COORDINATES: similar to AA sequence:RefSeq:WP_017463621.1
GO:0004177 - aminopeptidase activity [Evidence IEA]
GO:0030163 - protein catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013067982.1
COORDINATES: similar to AA sequence:RefSeq:WP_011982796.1
COORDINATES: protein motif:HMM:NF015431.2
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011518912.1
GO:0008718 - D-amino-acid dehydrogenase activity [Evidence IEA]; GO:0071949 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0055130 - D-alanine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003539555.1
COORDINATES: similar to AA sequence:RefSeq:WP_007823117.1
COORDINATES: similar to AA sequence:RefSeq:WP_007602330.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007752747.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007752746.1
COORDINATES: similar to AA sequence:RefSeq:WP_018897046.1
GO:0055085 - transmembrane transport [Evidence IEA]; GO:0042908 - xenobiotic transport [Evidence IEA]
multidrug efflux RND transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_016554379.1
COORDINATES: similar to AA sequence:RefSeq:WP_018326698.1
COORDINATES: similar to AA sequence:RefSeq:WP_018496598.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors [Evidence IEA]
GMC family oxidoreductase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012709789.1
COORDINATES: similar to AA sequence:RefSeq:WP_007598741.1
COORDINATES: similar to AA sequence:RefSeq:WP_003535873.1
COORDINATES: similar to AA sequence:RefSeq:WP_007598737.1
COORDINATES: similar to AA sequence:RefSeq:WP_003535875.1
COORDINATES: similar to AA sequence:RefSeq:WP_012709784.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007598762.1
COORDINATES: similar to AA sequence:RefSeq:WP_007788470.1
COORDINATES: similar to AA sequence:RefSeq:WP_004677682.1
enoyl-CoA hydratase/isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018495968.1
acyl CoA:acetate/3-ketoacid CoA transferase
COORDINATES: similar to AA sequence:RefSeq:WP_018896761.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007788478.1
COORDINATES: similar to AA sequence:RefSeq:WP_018896763.1
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011982527.1
COORDINATES: similar to AA sequence:RefSeq:WP_010660519.1
COORDINATES: similar to AA sequence:RefSeq:WP_007879072.1
COORDINATES: similar to AA sequence:RefSeq:WP_006471853.1
COORDINATES: similar to AA sequence:RefSeq:WP_006470081.1
COORDINATES: similar to AA sequence:RefSeq:WP_020812570.1
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003548916.1
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
GO:0019619 - 3,4-dihydroxybenzoate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011751239.1
GO:0008410 - CoA-transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018897889.1
COORDINATES: similar to AA sequence:RefSeq:WP_010140563.1
COORDINATES: similar to AA sequence:RefSeq:WP_018327727.1
COORDINATES: similar to AA sequence:RefSeq:WP_007604166.1
GO:0003796 - lysozyme activity [Evidence IEA]
GO:0016998 - cell wall macromolecule catabolic process [Evidence IEA]; GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012371.2
COORDINATES: similar to AA sequence:RefSeq:WP_007773652.1
COORDINATES: similar to AA sequence:RefSeq:WP_011428260.1
GO:0032955 - regulation of division septum assembly [Evidence IEA]
cell division topological specificity factor MinE
COORDINATES: similar to AA sequence:RefSeq:WP_003506498.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0000918 - division septum site selection [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003548119.1
GO:0004857 - enzyme inhibitor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012653486.1
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_009109969.1
galactofuranose ABC transporter, permease protein YjfF
COORDINATES: similar to AA sequence:RefSeq:WP_014129861.1
COORDINATES: similar to AA sequence:RefSeq:WP_018324772.1
COORDINATES: similar to AA sequence:RefSeq:WP_012061819.1
galactofuranose ABC transporter, galactofuranose-binding protein YtfQ
COORDINATES: similar to AA sequence:RefSeq:WP_018324011.1
GO:1905887 - autoinducer AI-2 transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003562274.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014989298.1
GO:0008784 - alanine racemase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004124697.1
COORDINATES: protein motif:HMM:NF012579.2
GO:1902495 - transmembrane transporter complex [Evidence IEA]
GO:0016301 - kinase activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013529648.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019861139.1
COORDINATES: similar to AA sequence:RefSeq:WP_020052649.1
GO:0008556 - P-type potassium transmembrane transporter activity [Evidence IEA]
GO:0006813 - potassium ion transport [Evidence IEA]
potassium-transporting ATPase subunit KdpC
COORDINATES: similar to AA sequence:RefSeq:WP_018448527.1
GO:0031004 - potassium ion-transporting ATPase complex [Evidence IEA]
potassium-transporting ATPase subunit KdpB
COORDINATES: similar to AA sequence:RefSeq:WP_011655123.1
potassium-transporting ATPase subunit KdpA
COORDINATES: similar to AA sequence:RefSeq:WP_003594574.1
COORDINATES: similar to AA sequence:RefSeq:WP_018428972.1
COORDINATES: similar to AA sequence:RefSeq:WP_010197641.1
PaaX family transcriptional regulator C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015477143.1
GO:0003995 - acyl-CoA dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010969032.1
GO:0003824 - catalytic activity [Evidence IEA]
NAD-dependent epimerase/dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018071539.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016557559.1
GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_003492288.1
GO:0009190 - cyclic nucleotide biosynthetic process [Evidence IEA]; GO:0035556 - intracellular signal transduction [Evidence IEA]
adenylate/guanylate cyclase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018237046.1
COORDINATES: similar to AA sequence:RefSeq:WP_015887336.1
GO:0016758 - hexosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015917248.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018237051.1
COORDINATES: similar to AA sequence:RefSeq:WP_012490432.1
COORDINATES: similar to AA sequence:RefSeq:WP_003595069.1
COORDINATES: similar to AA sequence:RefSeq:WP_007196546.1
COORDINATES: similar to AA sequence:RefSeq:WP_015917253.1
COORDINATES: similar to AA sequence:RefSeq:WP_007603683.1
COORDINATES: similar to AA sequence:RefSeq:WP_020808514.1
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020010922.1
COORDINATES: similar to AA sequence:RefSeq:WP_003492290.1
COORDINATES: similar to AA sequence:RefSeq:WP_006699099.1
COORDINATES: similar to AA sequence:RefSeq:WP_020294352.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
LuxR C-terminal-related transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014332636.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020723243.1
COORDINATES: similar to AA sequence:RefSeq:WP_010967202.1
COORDINATES: similar to AA sequence:RefSeq:WP_018517692.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007823564.1
COORDINATES: similar to AA sequence:RefSeq:WP_012113297.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007879052.1
COORDINATES: similar to AA sequence:RefSeq:WP_007879051.1
COORDINATES: similar to AA sequence:RefSeq:WP_014332638.1
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: similar to AA sequence:RefSeq:WP_017956539.1
four-carbon acid sugar kinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017956540.1
COORDINATES: similar to AA sequence:RefSeq:WP_010397933.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010397934.1
GO:0009436 - glyoxylate catabolic process [Evidence IEA]; GO:0071704 - organic substance metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010397935.1
GO:0050570 - 4-hydroxythreonine-4-phosphate dehydrogenase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
COORDINATES: similar to AA sequence:RefSeq:WP_007767307.1
COORDINATES: similar to AA sequence:RefSeq:WP_010397938.1
COORDINATES: similar to AA sequence:RefSeq:WP_014530826.1
COORDINATES: similar to AA sequence:RefSeq:WP_018480302.1
COORDINATES: similar to AA sequence:RefSeq:WP_010397946.1
COORDINATES: similar to AA sequence:RefSeq:WP_007767291.1
COORDINATES: similar to AA sequence:RefSeq:WP_012709041.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0052873 - FMN reductase (NADPH) activity [Evidence IEA]; GO:0008752 - FMN reductase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018238526.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018062645.1
GO:0050112 - inositol 2-dehydrogenase activity [Evidence IEA]
GO:0019310 - inositol catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020009057.1
MurR/RpiR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006724697.1
GO:0047590 - 5-dehydro-2-deoxygluconokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004684910.1
GO:0016823 - hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)
COORDINATES: similar to AA sequence:RefSeq:WP_019566982.1
GO:0050114 - myo-inosose-2 dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002965925.1
GO:0016861 - intramolecular oxidoreductase activity, interconverting aldoses and ketoses [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004121800.1
COORDINATES: similar to AA sequence:RefSeq:WP_011428301.1
COORDINATES: similar to AA sequence:RefSeq:WP_019364849.1