Secundilactobacillus paracollinoides strain TMW 1.1979 plasmid pL11979-2, complete sequence.
type: Entry
definition: Secundilactobacillus paracollinoides strain TMW 1.1979 plasmid pL11979-2, complete sequence.
sequence version: NZ_CP014914.1
sequence date: 2022-10-22
sequence: sequence
division: CON
label: NZ_CP014914.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN04505735
keyword: RefSeq
source: Secundilactobacillus paracollinoides
organism: Secundilactobacillus paracollinoides
taxonomy: Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Secundilactobacillus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP014914.1.\nSource DNA or bacteria available from the culture collection of the\nTechnische Mikrobiologie Weihenstephan upon request and only if\npermitted by a potential cooperation partner. Individual decisions.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Celera Assembler v. 1\nAssembly Name :: Lparacoll11979-1\nLong Assembly Name :: Lactobacillus paracollinoides TMW 1.1979 1\nGenome Coverage :: 107\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 10/22/2022 03:23:05\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 3,009\nCDSs (total) :: 2,917\nGenes (coding) :: 2,822\nCDSs (with protein) :: 2,822\nGenes (RNA) :: 92\nrRNAs :: 7, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 7, 6, 6 (5S, 16S, 23S)\ntRNAs :: 70\nncRNAs :: 3\nPseudo Genes (total) :: 95\nCDSs (without protein) :: 95\nPseudo Genes (ambiguous residues) :: 0 of 95\nPseudo Genes (frameshifted) :: 51 of 95\nPseudo Genes (incomplete) :: 28 of 95\nPseudo Genes (internal stop) :: 22 of 95\nPseudo Genes (multiple problems) :: 5 of 95\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 35858
topology: circular
so has quality: SO_0000988
location: 1..35858
location: region:1-35858:1
RO_0002162: 240427

NZ_CP014914
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN04505735
type: BioSample
SIO_000068: biosample

1
title: Pediococcus and Lactobacillus from brewery environment - whole genome sequencing and assembly
author: Behr, J.
author: Geissler, A.J.
author: Vogel, R.F.
journal: Unpublished

2
title: Direct Submission
author: Behr, J.
author: Geissler, A.J.
author: Vogel, R.F.
journal: Submitted (18-MAR-2016) Technische Mikrobiologie, Technische Universitaet Muenchen, Gregor-Mendel-Strasse 4, Freising, Bavaria 85354, Germany

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35858:1
position: 35858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-35858:1:source
so part of: sequence
organism: Secundilactobacillus paracollinoides
mol type: genomic DNA
strain: TMW 1.1979
isolation source: beer
plasmid: pL11979-2
country: Japan

240427
type: Taxonomy
SIO_000068: taxonomy

AYR61_RS14585
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14585
old locus tag: AYR61_14645
so part of: sequence
location: join(34910..35858,1..443)
location: region:1-35858:1
so has part: feature:34910-35858:1:exon
so has part: feature:1-443:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:34910-35858:1:exon

position:34910:1
position: 34910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-443:1:exon

position:443:1
position: 443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AYR61_RS14585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14585
old locus tag: AYR61_14645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011672911.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: APC family permease
translation: MENGKKKFRLFDAVLMSVVVILVVESAAPAAAIGTSQFFWWIFLLILFFLPYGLISSELGTAYTGDGGLYDWVKQAFGSRWGGRLAWVYWINYPIWMASLAVLFSQVAGTIFGLHLSTFASILIELVFVWFVVVLGNKPVSESKWILNLAAFAKIFTILSLFVLGVYVAVTKGVANSFAPHNLLPQMNVNSLSNLSVIIFNFLGFEVVATMADDMDNPKKQIPQAIIYGGILIAFFYLLSAFGMSVAVPTSKLSASSGLLDSFILMLGHMNWFVVIIGILFLYILASEMISWALGVNYVADYAAKDHVLPAVFGKEDKNDMPVGTGYLNGIVASVLVIAAPFIPNQDIFWAFFSLNVVALLMSYMMMFPAFLKLRKMDPDRERPFKVPGNKFMIQLMTWVPEVLLVVTIIFTIIPLNGTHAEISSKMPILIGTIITLAVGEIVVRYANHSENAAKKANPTDTH
SIO_010081: AYR61_RS14585
subclass of: SO_0000673
so part of: AYR61_RS14585
location: join(34910..35858,1..443)
location: region:1-35858:1
so has part: feature:34910-35858:1:exon
so has part: feature:1-443:1:exon

WP_065904185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34910-35858:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-443:1:exon

AYR61_RS14590
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
gene: aguA
locus tag: AYR61_RS14590
old locus tag: AYR61_14650
so part of: sequence
location: 464..1558
location: region:464-1558:1
so has part: feature:464-1558:1:exon
subclass of: SO_0000010

position:464:1
position: 464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1558:1
position: 1558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464-1558:1:exon

AYR61_RS14590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
gene: aguA
locus tag: AYR61_RS14590
old locus tag: AYR61_14650
EC number: 3.5.3.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014216117.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0047632 - agmatine deiminase activity [Evidence IEA]
GO process: GO:0009446 - putrescine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: agmatine deiminase
translation: MKTLDSTPKKDGYRMPGEFEPHKGVYILWPERPDNWRNGGKPAQKTFVEVAKAISQFEHVTVGVSDAQYENALNMLPDDVEVVEISNDDSWVRDCGATFVKNDQGDLRAVDWTFNAWGGLVDGLYFPWDKDDRVASKMAELEHVDRYRLDDFILEGGSIHVDGEGTLITTEECLLSEGRNSQLSKEQIEEVLKEHLNLEKIIWLKRGIYLDETNGHVDNIANFVKPGVVALAWTDDQSDPQYEISKENLEILENATDAKGRKIQVEKLYVPKPVTITKEESEGVDAVDGTLPRTEGERLAASYVNYYTANGGIVFPTFGDPNDKKAKETLSKLYPDRKIVGVPAREILLGGGNIHCITQQVPQN
SIO_010081: AYR61_RS14590
subclass of: SO_0000673
so part of: AYR61_RS14590
location: 464..1558
location: region:464-1558:1
so has part: feature:464-1558:1:exon

WP_057910129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:464-1558:1:exon

AYR61_RS14595
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
gene: arcC
locus tag: AYR61_RS14595
old locus tag: AYR61_14655
so part of: sequence
location: 1629..2597
location: region:1629-2597:1
so has part: feature:1629-2597:1:exon
subclass of: SO_0000010

position:1629:1
position: 1629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2597:1
position: 2597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1629-2597:1:exon

AYR61_RS14595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
gene: arcC
locus tag: AYR61_RS14595
old locus tag: AYR61_14655
EC number: 2.7.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003634647.1
GO function: GO:0008804 - carbamate kinase activity [Evidence IEA]
GO process: GO:0006520 - amino acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbamate kinase
translation: MSKRRIVVALGGNAILSKDASAEAQQNALRETAKSLVKFIKNGDELIVSHGNGPQVGNLLLQQAAGSTETNPAMPIDTAVAMTQGSIGYWLQNALDEVITAAGLDVSVATVVTQVEVSPDDQAFSDPSKPIGPFYSKEEAKVQSAAHPDFKFVEDAGRGYRRVVPSPKPIDVHEALVVEKLVKSGVVPISVGGGGVPVVREGNRLVGREAVIDKDFASEKLAEQVRADLLIILTAIDHVFVNFNTPNQKALEDVTINELKKYVDENQFAKGSMLPKVQAAIDFVENSDNGQAVITSLDNIANFLENGDGTVISKKLSKIYDF
SIO_010081: AYR61_RS14595
subclass of: SO_0000673
so part of: AYR61_RS14595
location: 1629..2597
location: region:1629-2597:1
so has part: feature:1629-2597:1:exon

WP_065904127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1629-2597:1:exon

AYR61_RS15055
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS15055
so part of: sequence
location: 2629..3416
location: region:2629-3416:1
so has part: feature:2629-3416:1:exon
subclass of: SO_0000010

position:2629:1
position: 2629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3416:1
position: 3416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2629-3416:1:exon

AYR61_RS15055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS15055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013727908.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MKNYPSNITRQQFELIRPALENFRKRTKPRKYDLYEVFCAVLYVLKTGCQWRQVPGDFPEWRSVYNYYKIWSTKAEPTADSLLEQVFKKIVIARRTYQGRSALTSFIIVAAQSVKNTATAENKGYDAGKKISGIKRHLAVDINGFPQAIHMTRANVSDRDGASAMIALHAMHLRQVQNVLVDGGYSGVNFQLDVASNLNATVQVAKRNELHRFEVMPQRWVVERSFSWLENCRRLWKNCERQLTTSLQMVVSAFLALLLKRF
SIO_010081: AYR61_RS15055
subclass of: SO_0000673
so part of: AYR61_RS15055
location: join(2629..2887,2887..3416)
location: region:2629-3416:1
so has part: feature:2629-2887:1:exon
so has part: feature:2887-3416:1:exon

WP_156770511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2629-2887:1:exon

position:2887:1
position: 2887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2887-3416:1:exon

AYR61_RS14610
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
gene: aguA
locus tag: AYR61_RS14610
old locus tag: AYR61_14670
so part of: sequence
location: 3483..4592
location: region:3483-4592:1
so has part: feature:3483-4592:1:exon
subclass of: SO_0000010

position:3483:1
position: 3483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4592:1
position: 4592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3483-4592:1:exon

AYR61_RS14610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
gene: aguA
locus tag: AYR61_RS14610
old locus tag: AYR61_14670
EC number: 3.5.3.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008841686.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0047632 - agmatine deiminase activity [Evidence IEA]
GO process: GO:0009446 - putrescine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: agmatine deiminase
translation: MIQESTPIQDGFRLPGEFEDFKSGYMIWPQRSDNWRDGGKPAQKKFVQLAKLLSQYQVITVLVNENQYKNARGALPDEIRVIEMSSNDAFVKDTGPFYVVDANQQVRCVDFSFNAWGGLLDGLYFPWDKDDELGLKLADLDRFDSYQSDFVLEGCSVAVDGEGTLITTEDVILSEGRNGQITKTDAEQIFHDYLGITKVIWLKQGFFMDETGGDADNMVSFVEPGEILLTWTDDETDEQYGSSHEALRILENETDARDRKLKIHKVIGPKPQWLSQEEANGVDPINGMLPRNAGQRLTATYVNAILLNEAVVVPEFDDPQDEVAKQQFASIFPSREIVGFSAREFLTGGGGLHTLILSVPTHHRGGDRR
SIO_010081: AYR61_RS14610
subclass of: SO_0000673
so part of: AYR61_RS14610
location: 3483..4592
location: region:3483-4592:1
so has part: feature:3483-4592:1:exon

WP_065904134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3483-4592:1:exon

AYR61_RS14615
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14615
old locus tag: AYR61_14675
so part of: sequence
location: 4589..5401
location: region:4589-5401:1
so has part: feature:4589-5401:1:exon
subclass of: SO_0000010

position:4589:1
position: 4589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5401:1
position: 5401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4589-5401:1:exon

AYR61_RS14615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14615
old locus tag: AYR61_14675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008841685.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MurR/RpiR family transcriptional regulator
translation: MNFFEIVSAHLSSLTKSEQSLFDYVIKNMDHIKTQSIREVAAETFVSTATFLRFVKKIGFSGFSEFTTVIKFTVLNNKDEEKPSPFTVSQTDYREEYLKNITESVRVISAGKLHQITSKLAEHPRLFFFSKGVDKYATEYIHYLYTMAGFEVEYPRDHDFRAVACHQVKKDDVVFFLTYDGQDAEYLQMINEFVENGEKPLIISVTEPDNNTIQNLSDLNLYIFADDVSVYNTEISSRISTIAVMELILYQYIEDYGGRDFNFVKLSGKN
SIO_010081: AYR61_RS14615
subclass of: SO_0000673
so part of: AYR61_RS14615
location: 4589..5401
location: region:4589-5401:1
so has part: feature:4589-5401:1:exon

WP_065904136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4589-5401:1:exon

AYR61_RS15255
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS15255
pseudo: true
so part of: sequence
location: complement(<5522..>5644)
location: region:5522-5644:-1
so has part: feature:5522-5644:-1:exon
subclass of: SO_0000010

position:5522:-1
position: 5522
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:5644:-1
position: 5644
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5522-5644:-1:exon

AYR61_RS15255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS15255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611098.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS30 family transposase
SIO_010081: AYR61_RS15255
subclass of: SO_0000673
so part of: AYR61_RS15255
location: complement(<5522..>5644)
location: region:5522-5644:-1
so has part: feature:5522-5644:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5522-5644:-1:exon

AYR61_RS14620
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14620
old locus tag: AYR61_14680
so part of: sequence
location: 5927..6718
location: region:5927-6718:1
so has part: feature:5927-6718:1:exon
subclass of: SO_0000010

position:5927:1
position: 5927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6718:1
position: 6718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5927-6718:1:exon

AYR61_RS14620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14620
old locus tag: AYR61_14680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016527412.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MEIITFSAIKGGVGKTTLAFNYGEWLAKNGKHVLFIDLDHQSNLTQTYNIYDNQDTVGNIFLDRGKVQIHEISAYISIIAGDMHLDDIERTIENKTNKNMFLYMWLSDNYERLNLGKFEYIILDCHPDFSTATKNAVIISNAILSPITPSEHGYNAKFNLEERINELRKEAIDYSTRKSYVTTKLFFIANMIKHNTRSSRELLKALKGDPSVLATVPEKELFNRSTLDKKSLSKMAEDHKTYIDQHEFFDSMDKTFNEITEKL
SIO_010081: AYR61_RS14620
subclass of: SO_0000673
so part of: AYR61_RS14620
location: 5927..6718
location: region:5927-6718:1
so has part: feature:5927-6718:1:exon

WP_057910135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5927-6718:1:exon

AYR61_RS14625
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14625
old locus tag: AYR61_14685
so part of: sequence
location: 6790..7029
location: region:6790-7029:1
so has part: feature:6790-7029:1:exon
subclass of: SO_0000010

position:6790:1
position: 6790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7029:1
position: 7029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6790-7029:1:exon

AYR61_RS14625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14625
old locus tag: AYR61_14685
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016370331.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAFDPENKNIKKALQKNETEQPTDTKDKLVIPVFKDEEERTKNYTFSLQPSARKRLDGLAKEHNFKSASKFLNELIKNM
SIO_010081: AYR61_RS14625
subclass of: SO_0000673
so part of: AYR61_RS14625
location: 6790..7029
location: region:6790-7029:1
so has part: feature:6790-7029:1:exon

WP_010011603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6790-7029:1:exon

AYR61_RS14630
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14630
old locus tag: AYR61_14690
so part of: sequence
location: 7054..7431
location: region:7054-7431:1
so has part: feature:7054-7431:1:exon
subclass of: SO_0000010

position:7054:1
position: 7054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7431:1
position: 7431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7054-7431:1:exon

AYR61_RS14630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14630
old locus tag: AYR61_14690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010492166.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGISISVIFLFASLIVFWIIPAIGIAKKHLVDDRFFIRQWLFPMQYWLQLLFERISGNRRIVVRIFQIMSLFITYFCGLLMLMIFSVFDGNLLKHPEAFLLFEYLLVSSIAYWFQPKAGKVYKTK
SIO_010081: AYR61_RS14630
subclass of: SO_0000673
so part of: AYR61_RS14630
location: 7054..7431
location: region:7054-7431:1
so has part: feature:7054-7431:1:exon

WP_040472813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7054-7431:1:exon

AYR61_RS14635
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14635
old locus tag: AYR61_14695
so part of: sequence
location: 7934..9043
location: region:7934-9043:1
so has part: feature:7934-9043:1:exon
subclass of: SO_0000010

position:7934:1
position: 7934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9043:1
position: 9043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7934-9043:1:exon

AYR61_RS14635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14635
old locus tag: AYR61_14695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005728424.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MTKSTNFNYYEADNVYGALFFQFPKVLMYGEQYKHLSNDAKLAYMVLKDRLEYSLRNNWVDSEGHVYFIFTNQELMDLFNCSKGKVIKIKAELESIGLLVQKQMGFNPKTKKNEPNRLYLSKLDVKATDVYLRGEFGQKSSQTLATSGSSKNELPRETVETLATSGSSKNELPHKFVDNSSQTLATSGSSKNGLNLYREPKERDKNRYNIDTQKLDFSTANFSPVEIQKQNQDLVNHANDFLTDEDSGLPVFLEPEAVQLLSFWCRTPQQMRRFIGIILNAKYRVEKDHKDIGVIIPLDDEELKPLMTKALRRYFNALRSNEKHIKNVENYLYGTMQNLFGVWWNKQAAREYAAKHPEEQNTDNERSWN
SIO_010081: AYR61_RS14635
subclass of: SO_0000673
so part of: AYR61_RS14635
location: 7934..9043
location: region:7934-9043:1
so has part: feature:7934-9043:1:exon

WP_065904140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7934-9043:1:exon

AYR61_RS14640
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14640
old locus tag: AYR61_14700
so part of: sequence
location: 9449..9730
location: region:9449-9730:1
so has part: feature:9449-9730:1:exon
subclass of: SO_0000010

position:9449:1
position: 9449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9730:1
position: 9730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9449-9730:1:exon

AYR61_RS14640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14640
old locus tag: AYR61_14700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005693113.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelB/DinJ family antitoxin
translation: MAVKEKKRVQVQIDKELADNTEAVLSQLGLNPTTAINMFYKRIVADAALPFKPALSEAERANLSLLKATKETPVTEFKDAKEVADWLNDPDED
SIO_010081: AYR61_RS14640
subclass of: SO_0000673
so part of: AYR61_RS14640
location: 9449..9730
location: region:9449-9730:1
so has part: feature:9449-9730:1:exon

WP_010014831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9449-9730:1:exon

AYR61_RS14645
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14645
old locus tag: AYR61_14705
so part of: sequence
location: 9777..9962
location: region:9777-9962:1
so has part: feature:9777-9962:1:exon
subclass of: SO_0000010

position:9777:1
position: 9777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9962:1
position: 9962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9777-9962:1:exon

AYR61_RS14645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14645
old locus tag: AYR61_14705
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010620892.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKDTITINDFFEIAKETDLKDLLDKSLHEPDPEKRKVYDALYTYFLDKRQDEVIKRKDFVR
SIO_010081: AYR61_RS14645
subclass of: SO_0000673
so part of: AYR61_RS14645
location: 9777..9962
location: region:9777-9962:1
so has part: feature:9777-9962:1:exon

WP_010620892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9777-9962:1:exon

AYR61_RS14650
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14650
old locus tag: AYR61_14710
so part of: sequence
location: 9959..10639
location: region:9959-10639:1
so has part: feature:9959-10639:1:exon
subclass of: SO_0000010

position:9959:1
position: 9959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10639:1
position: 10639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9959-10639:1:exon

AYR61_RS14650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14650
old locus tag: AYR61_14710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007124583.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zeta toxin family protein
translation: MIDKPQYIIVAGINGAGKSTLYDTFPILFDKTKRINADELLRQMGGDWHKDSDNLKAMKEEIKQLHYALDHQQSIHVETTLAGRGKAQLNLIDKAHKNGFEVTLLYVALRDENLAIQRVNERVQKGGHGVPVATIKKRYQQSKHNLPLVAFKSDKVMIYDNSEKFTSVYAREKGQVFKNDLRHFPWINQNITYPEKVQKQLQNFADQNPEVKPKNDPENKNDRPSY
SIO_010081: AYR61_RS14650
subclass of: SO_0000673
so part of: AYR61_RS14650
location: 9959..10639
location: region:9959-10639:1
so has part: feature:9959-10639:1:exon

WP_010012556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9959-10639:1:exon

AYR61_RS14655
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14655
old locus tag: AYR61_14715
so part of: sequence
location: complement(10629..10907)
location: region:10629-10907:-1
so has part: feature:10629-10907:-1:exon
subclass of: SO_0000010

position:10629:-1
position: 10629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10907:-1
position: 10907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10629-10907:-1:exon

AYR61_RS14655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14655
old locus tag: AYR61_14715
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003603789.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNQYEKLVDHQARLKQKIEREDFKLRQSKYYESRQDRKARSRRLIQKGALLEKYFQADNLSIEQTEDLLKTFADYVNAHKPNKLKNDQPNN
SIO_010081: AYR61_RS14655
subclass of: SO_0000673
so part of: AYR61_RS14655
location: complement(10629..10907)
location: region:10629-10907:-1
so has part: feature:10629-10907:-1:exon

WP_065904143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10629-10907:-1:exon

AYR61_RS14660
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14660
old locus tag: AYR61_14720
so part of: sequence
location: complement(10930..11157)
location: region:10930-11157:-1
so has part: feature:10930-11157:-1:exon
subclass of: SO_0000010

position:10930:-1
position: 10930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11157:-1
position: 11157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10930-11157:-1:exon

AYR61_RS14660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14660
old locus tag: AYR61_14720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012552807.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIGGIVMSQSNLEKQEAKLKALNQKIKDEKNKIEQRLGKQIISQANLDYANLSNDQIKLLAKQFSEFLKVKSVDH
SIO_010081: AYR61_RS14660
subclass of: SO_0000673
so part of: AYR61_RS14660
location: complement(10930..11157)
location: region:10930-11157:-1
so has part: feature:10930-11157:-1:exon

WP_003555660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10930-11157:-1:exon

AYR61_RS14665
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14665
old locus tag: AYR61_14725
so part of: sequence
location: 11411..13474
location: region:11411-13474:1
so has part: feature:11411-13474:1:exon
subclass of: SO_0000010

position:11411:1
position: 11411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13474:1
position: 13474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11411-13474:1:exon

AYR61_RS14665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14665
old locus tag: AYR61_14725
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016511122.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobQ family relaxase
translation: MAIFHMIFSNISAGKGRSAIAGASYRSGEKLFDQKEGRSYFYARSVMPESFILTPKNAPEWASDRKKLWNEVERKDRRANSRYAKEFNVALPVELSEDEQKKLLTKYVQENFVDEGMVADVAIHRDHPDNPHAHVMLTNRPFNPDGTWGLKSKRENILDENGNKTYTGNSRFPRSRKVWLVDWDKKEKINQWRHNWAVSVNQVLEQKNIPDRISEKSFIEEGIDDTPTQHEGINSKRHERKEFNQQVKNYRKSKAGYKNNQEKVINRGHLDSLSKHFSFNEKRVVKELSHELKTYISLENLDDKRRMLFNWKNSTLIKHAVGEDVTKQLLTINQQESSLKKADELLNKVVDRTTKKLYPELNFEQTTQAERRELIKETDSEQTVFKGSELNERLMNIRDDLLAQQLLTFTKRPYVGFKLLMQQEKKVKIELKYTLMIHDDSLESLEHVDQGLLEKYSPTEQQKITRAVKDLRTIMAVKQVIKTQYHEVLKRAFPKGDLDELPMTKQEQAYTAVMYYDPVLKPCQAETIEQWQANPPQVFSPQEHQQGLAYLSGQLSLDQLENHHLQRVLKHDGTKQLFFGECKADPTIKNSQIEKIQMQLKEQQAKDDQYRKANIGHYQPLNYKPVSPDYYLKTAFSDAIMTVLYARDEDYQRQKQARGLKETEWEMTKKQRQHQTRNRHEDWGMHL
SIO_010081: AYR61_RS14665
subclass of: SO_0000673
so part of: AYR61_RS14665
location: 11411..13474
location: region:11411-13474:1
so has part: feature:11411-13474:1:exon

WP_065904146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11411-13474:1:exon

AYR61_RS14670
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14670
old locus tag: AYR61_14730
so part of: sequence
location: 13594..15105
location: region:13594-15105:1
so has part: feature:13594-15105:1:exon
subclass of: SO_0000010

position:13594:1
position: 13594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15105:1
position: 15105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13594-15105:1:exon

AYR61_RS14670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14670
old locus tag: AYR61_14730
EC number: 5.6.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014940859.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IA DNA topoisomerase
translation: MVYQRDQAIKNFKPEPYFELNAEILTNQQEFVAKLDPYQRFKDETGLMTFMQAKHVQKGSQDGFIKDVQKQGKKRASPQLFSLSSLQSAMNKRYHASASQTLAAIQSLYEDKLLSYPRTDCAYITDEEFEYLVANLTKYLGLVSKQVALTNTTPNKRYVNGKKVEEHYAIIMTKVVPTKEKLANLPKLQQQVYDLVLRTTLAMFADPYEYEETTIITQVGDANFKATGKVPTKQGWQALFDDHKADQQEAATLPIVHQGDQVQANLQTPQKETTPPVPFTEGTLITAMKTAGKTLDDEVAQAILKDVQGIGTSATRANVLEILKKRGYLVTEKNKLHVSEAGITLCKAVELEPLLTSPEMTAKWEQALQQISTEERTPDNFLNQIKKFVAKLIADVPTQLTGSAAIKQQINHQQQAQKAAEVFLETPQATVLNKQKFYIVKPKQGEDFTLPKKWSSKTLGKTAIKALVTKGETSKLKGFKSKKGKSFDAKLKLDGHKLSFDFD
SIO_010081: AYR61_RS14670
subclass of: SO_0000673
so part of: AYR61_RS14670
location: 13594..15105
location: region:13594-15105:1
so has part: feature:13594-15105:1:exon

WP_083220081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13594-15105:1:exon

AYR61_RS14675
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14675
old locus tag: AYR61_14735
so part of: sequence
location: 15227..15442
location: region:15227-15442:1
so has part: feature:15227-15442:1:exon
subclass of: SO_0000010

position:15227:1
position: 15227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15442:1
position: 15442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15227-15442:1:exon

AYR61_RS14675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14675
old locus tag: AYR61_14735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015474742.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNNELAVLASELPVLQAKGTYKYLKEITGNGAYYQVAWQKLSDGYVALYGTTPIQIRSLPTLNDIFEDEEG
SIO_010081: AYR61_RS14675
subclass of: SO_0000673
so part of: AYR61_RS14675
location: 15227..15442
location: region:15227-15442:1
so has part: feature:15227-15442:1:exon

WP_003679901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15227-15442:1:exon

AYR61_RS14680
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14680
old locus tag: AYR61_14740
so part of: sequence
location: 15446..16570
location: region:15446-16570:1
so has part: feature:15446-16570:1:exon
subclass of: SO_0000010

position:15446:1
position: 15446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16570:1
position: 16570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15446-16570:1:exon

AYR61_RS14680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14680
old locus tag: AYR61_14740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002346505.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPNKADVKAWKAQLVAQAEQQILKLTDSDQFKKYLNTLAKFHRYSARNIDLIYAQNPQATQVAGFKQWQKAFNRTVNRGAKAIRIAAPIIKKLTPAEQKHLDTTDERAIVGYRYLPVFDVAQTSGEPVLSAKDFVKENLADHQNVTSLYNACKDYLNQQTDLKVSEVPLETLNGAKGYFQPSTNEIVIGGDEPDNALKLKTLYHEYAHSQLHGLKSAFKDRPRAYQETQAEAIAYVAMQNIGVDTSNYSLGYVATWAKDKAVIHSALSEIQQVSNKVIELSDGLTKQLGLQEAQKEPEHDLKKLSAHDLNKSYQSLQKQVQQATNPQQKVQFKNQLNDVHQEISKRTQKQLQAFSEQNPEIKQPESELDQSLKR
SIO_010081: AYR61_RS14680
subclass of: SO_0000673
so part of: AYR61_RS14680
location: 15446..16570
location: region:15446-16570:1
so has part: feature:15446-16570:1:exon

WP_065904148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15446-16570:1:exon

AYR61_RS15260
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS15260
so part of: sequence
location: complement(16727..16789)
location: region:16727-16789:-1
so has part: feature:16727-16789:-1:exon
subclass of: SO_0000010

position:16727:-1
position: 16727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16789:-1
position: 16789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16727-16789:-1:exon

AYR61_RS15260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS15260
inference: COORDINATES: protein motif:HMM:NF028245.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative holin-like toxin
translation: MLLFGTFLIALLSYIDKHHK
SIO_010081: AYR61_RS15260
subclass of: SO_0000673
so part of: AYR61_RS15260
location: complement(16727..16789)
location: region:16727-16789:-1
so has part: feature:16727-16789:-1:exon

WP_222843308.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16727-16789:-1:exon

AYR61_RS15075
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS15075
so part of: sequence
location: complement(17003..18241)
location: region:17003-18241:-1
so has part: feature:17003-18241:-1:exon
subclass of: SO_0000010

position:17003:-1
position: 17003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18241:-1
position: 18241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17003-18241:-1:exon

AYR61_RS15075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS15075
EC number: 3.1.21.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010386975.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: restriction endonuclease subunit S
translation: MKDKHTKYPQLRFKGFTDPWEQRKLSEIYDKIRNAFVGTATPYYVNQGHFYLESNNVKYGKLNFNNEVYINDDFYQKQKPNWLHTGDLVVVQSGHVGHSAVIPSELNNTAAHAVIIVAKPKQKIDPYFINDYLQTNIARKQIDNITTGNTIKHILASAMKMFEVSLPSYEEQRPISNLLAQIDDTITLHQRKLAKLKELKQGYLQKLFPKNGSKFPQLRFAGFADAWEERKLGELSNIVGGGTPSTSNPEYWDGDIDWYAPAEIGEQSYVSKSKKTITELGLKKSSARILPVGTVLFTSRAGIGNTAILAKEATTNQGFQSIVPDQNKLDSYFIFSRTNELKRYGEVTGAGSTFVEVSGKQMSKMSIMVPELSEQQKIGSFFKQLDDTIALHQRKLEKLQELKKGYLQKMFC
SIO_010081: AYR61_RS15075
subclass of: SO_0000673
so part of: AYR61_RS15075
location: complement(17003..18241)
location: region:17003-18241:-1
so has part: feature:17003-18241:-1:exon

WP_083215626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17003-18241:-1:exon

AYR61_RS14690
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14690
old locus tag: AYR61_14750
so part of: sequence
location: complement(18231..19853)
location: region:18231-19853:-1
so has part: feature:18231-19853:-1:exon
subclass of: SO_0000010

position:18231:-1
position: 18231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19853:-1
position: 19853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18231-19853:-1:exon

AYR61_RS14690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14690
old locus tag: AYR61_14750
EC number: 2.1.1.72
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003553103.1
GO function: GO:0015666 - restriction endodeoxyribonuclease activity [Evidence IEA]; GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]; GO:0009307 - DNA restriction-modification system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I restriction-modification system subunit M
translation: MSEKTTQASQLESALWNAADVLRGKMDASEYKNYLLGLIFYRFLSEKTLTTFSDWAGETENVTRKYAQYMDPQFELEGVSVQPSLVEYLQNTLGYLIQPQALYATLIGKIQAHTFALDDLSQALHDLEQSTQNLSSAQDFSGLFADVDLSSNKLGSSLQQRNQTISDTMLALNAIDLIHHQGDVLGDAYEYLIAQFASDSGKKAGEFYTPRQVSDIIAQIVTYQRNAGDNQVRTIYDPAVGSGSLLLNVGQHVQDPSLVSYHGQELNTTTFNLARMNLMLHGVSYDDMHLRNGDTLSKDWPVDEPYLFDAVVMNPPYSAHWDNSDKRLSDPRFRDYGVLPPKSKADFAFLLHGFYHLQEHGTMGIVLPHGVLFRGAKEGKIRQKLLLDNRIDAIIGLPANIFHSTSIPTLIMILKKHKTTDDVLFIDASREFEKDKNQNKLTAANIQKIVTTYQNRQDVDKYAHVASPAEIKENDYNLNIPRYVDTFEPEPEIDLDQVKADLKQLDEKISQNEQAFNELASQLVATQVNDQSKPEAHNEG
SIO_010081: AYR61_RS14690
subclass of: SO_0000673
so part of: AYR61_RS14690
location: complement(18231..19853)
location: region:18231-19853:-1
so has part: feature:18231-19853:-1:exon

WP_065904150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18231-19853:-1:exon

AYR61_RS14695
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14695
old locus tag: AYR61_14755
so part of: sequence
location: complement(19867..23034)
location: region:19867-23034:-1
so has part: feature:19867-23034:-1:exon
subclass of: SO_0000010

position:19867:-1
position: 19867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23034:-1
position: 23034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19867-23034:-1:exon

AYR61_RS14695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14695
old locus tag: AYR61_14755
EC number: 3.1.21.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015639662.1
GO component: GO:0019812 - type I site-specific deoxyribonuclease complex [Evidence IEA]
GO function: GO:0009035 - type I site-specific deoxyribonuclease activity [Evidence IEA]
GO process: GO:0009307 - DNA restriction-modification system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HsdR family type I site-specific deoxyribonuclease
translation: MLELSFEKEVVKTLTTGSNQWVERKDLYGATPDQLWANFRDKLNNNNYAKLQGHPLTDTEFNQVKRAIEVRTPYEAAKLLAAENGIGKVEVERDDAKLGTVTLELFWKADVAGGKSSYEVVRQAVRPRLAGTQDVDPDRRFDVTLLINGLPLIQLELKKATVELNQAFNQIEKYAQEGKYTGIYSLLQMFVIMTPDSTAYFANAEPDHFNKAFLFNWRTRDNHPVENGLAFTRQVLNIPMAHKMVSEYTVIDQERQSLILLRPYQIYAIEAVMHRIHDHQDGFVWHTTGSGKTLTSYKTAKLAAQDPGVDKVIFLVDRRDLDEQTTSNFSAYAANDDIAINEAQNTGDLMRKLQQNDGKVLVTSIQKLHRAVKKTQAQLATGKQSRFSKTLKQRVIFFVDEAHRSQFGKMQKEIRAAFVNSNWYGYTGTPIFNENKKQLKGDLAVTTEELFGKVCHVYNLRDALEDQAVLPFNVEHVTTIGKDTLITRALEKETNRVKARRDKQGRLLSTADEAKIQAKIQAMSVKDLEETYLTPADFETDEHINQVVQYILQKGPRKTSLGHGNYNAILTTSSIEMAQRYYQAFKAAKKTTHNQLDPDWPRIAITYSLSENEDQSAHKHDQMATILKDYNQQYHTNFDLTDLNLYNEDVAKRAARREAVFAHLQTDQEINLVIVVRRLLTGFDAPRLNTLFVDRTLAYQELIQAYSRTNRLQNRELKQEGQIVTFRVPVIMEANEREAYKLYSGEGSFNVIIRPTYQQAVLKFQKAVVDLKAIAPTPTAADDLKGTTAKVQFVKAFRQVNQQLNSLSMYNDFTWENSEKTFGIAQPEVESYTGKYLRIKAAVTNQEPEKVPEELAALDFSLAVGSVVLVDYDYLTQLIQDWIDEQQRYSTPDQAQAHMTDYLQNSAKVQASLNKLAETQPQQAQLIREAMPYIEQKMQQFQQQSDQNQAPVALNARELVADYAQKQLVKKTTTFAHTWGLDQAALLRVAREHTVGTDEWHHEQELTQSANLAAALQAQTAAGPKIPAILPLYRIKSQAAWRQFIEHDLAIYLQK
SIO_010081: AYR61_RS14695
subclass of: SO_0000673
so part of: AYR61_RS14695
location: complement(19867..23034)
location: region:19867-23034:-1
so has part: feature:19867-23034:-1:exon

WP_065904152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19867-23034:-1:exon

AYR61_RS14700
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14700
old locus tag: AYR61_14760
so part of: sequence
location: complement(23095..24861)
location: region:23095-24861:-1
so has part: feature:23095-24861:-1:exon
subclass of: SO_0000010

position:23095:-1
position: 23095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24861:-1
position: 24861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23095-24861:-1:exon

AYR61_RS14700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14700
old locus tag: AYR61_14760
EC number: 3.6.4.-
inference: COORDINATES: protein motif:HMM:NF012789.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent helicase
translation: MDYKRVSSHENININQNFLVSAGPGSGKTEFLVNHIHHIIKESGKINTLRKVLAIAYTNVAADNLSRRIGYTSGLTQVSTIHSFLSEFILLPYSWLLEGKYSLPKKLTITPHQLASFSDFKELCQKYKYQYMTYYDNIRDRISSSIYFKKLNDHYSLTIDQKDTRVPNKRYPIKNDPKFFMEYKQSCWKNGIINYDDVLLLSLIILENNPFVAKLISNSFPFIFIDEFQDTSIIQAEIISILADNGSKVGVIGDENQSIYGFAHSSQETFRKFSLPKLNKYCININHRSSDPIIKLLNGITENSGKDPQILQNIPGPKPTIVVGEPRLVVNWFLKNHPQNSACSKMIISYSNDYIEQINPNYSAPSKKIKDNINKMRTDDRGRFIYSIIKSLKLASEGQINASISSFFRSYEKTNADEKYVISKFYYAYNKINNYLNRDISTWFNEILLDKNIHEANSDNISKIMKKITGRNKCFLGLKVKYLLSDVPLEGTNSEFRTIHQSKGDEADAVLIMIDDTGKKRESNFSFLLNPSLSGSNEDDRVYYVAMSRARHELFFSIPSLNKNIRKQIEATGLVKIQDILDILNSEV
SIO_010081: AYR61_RS14700
subclass of: SO_0000673
so part of: AYR61_RS14700
location: complement(23095..24861)
location: region:23095-24861:-1
so has part: feature:23095-24861:-1:exon

WP_065904160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23095-24861:-1:exon

AYR61_RS14705
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14705
old locus tag: AYR61_14765
so part of: sequence
location: complement(24851..26905)
location: region:24851-26905:-1
so has part: feature:24851-26905:-1:exon
subclass of: SO_0000010

position:24851:-1
position: 24851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26905:-1
position: 26905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24851-26905:-1:exon

AYR61_RS14705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14705
old locus tag: AYR61_14765
inference: COORDINATES: protein motif:HMM:NF014516.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MFISSVEITNFRTFKEKQIIRFTEGINILVGPNNIGKTTIISAIRLIFDKNKFGLDINDFSKIETKEELKNCSPKITVSVNLQKSNKEGSDSDDLLAIRNWLTDIDNPYKAKITMQFQLPTKYEKAYLDAVKDLDDIGSVWLELEDEFLPKYQRKYFVGESAQPLMDNSLSRFNCQYLPAIRDAEKRMNSGNKYLLNKLLNFFIDYDLKSNEELKKSDIEKKMQKRHKDFHDLAVNLLNNLSPRFKEGKKEMLKYSSQTGATFDGEEPEFNSALNDHDILKEFSLVVKNGESNVPINLNGLGYNNLIYISLVLAELQQSRSNSYFGDNSSVFPFLLIEEPEAHLHPDMQYDFLKFLQNNIKDGTTSETAKQVIITTHSPNITAAASLDDLIVLSKYKSGVKIGYPGETFIDNPKDKKFVERFLDVTRSNLFFTNQLILIEGLAEQMLIPQFMKADTSNIQNRHISIINLSGRYFIPFLRMFDTNKNPDTAIYKQIACLTDLDPVQGKQNKSCPPIFQAEPDSKNPNIESIKALKSANIKVFSQDEDSGYKSNEGWTFEYQLYMDNPDLMPLIFHDSMRYCDAWENLKKMSIKNLSIEKISNTFQNERSKQMDGILKENHNTNDLSEITDPKLIKLYLGTMFLYSIKDKGLYAQELSEEISSGKSITVPKYIKECFKWMADKNGL
SIO_010081: AYR61_RS14705
subclass of: SO_0000673
so part of: AYR61_RS14705
location: complement(24851..26905)
location: region:24851-26905:-1
so has part: feature:24851-26905:-1:exon

WP_065904161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24851-26905:-1:exon

AYR61_RS14710
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14710
old locus tag: AYR61_14770
so part of: sequence
location: complement(27069..27449)
location: region:27069-27449:-1
so has part: feature:27069-27449:-1:exon
subclass of: SO_0000010

position:27069:-1
position: 27069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27449:-1
position: 27449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27069-27449:-1:exon

AYR61_RS14710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14710
old locus tag: AYR61_14770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003625677.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNNQEFDLATVKHFFEHDYHDRGMMKWQGFYLSDHTAALNQQNQQLNAVYVPRPQQSLATITEVLADAYQRQQPVTIQLKTVDQNNRHLPDITTLIHGYNANDIVIDADRFIPLLEIRNIVYKGEV
SIO_010081: AYR61_RS14710
subclass of: SO_0000673
so part of: AYR61_RS14710
location: complement(27069..27449)
location: region:27069-27449:-1
so has part: feature:27069-27449:-1:exon

WP_065904163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27069-27449:-1:exon

AYR61_RS14715
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14715
old locus tag: AYR61_14775
so part of: sequence
location: complement(27442..27762)
location: region:27442-27762:-1
so has part: feature:27442-27762:-1:exon
subclass of: SO_0000010

position:27442:-1
position: 27442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27762:-1
position: 27762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27442-27762:-1:exon

AYR61_RS14715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14715
old locus tag: AYR61_14775
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003645617.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetyl-CoA carboxylase
translation: MNSDIEIIKGRLTLLFKRRPQTRYWLMLTNDTYDQTYNLFFNSQRANERLQSVPLHKLAHYDLADLEKLLKTLRQDIKLTIEFVGFTGERWPASQKLIQRKRVPLE
SIO_010081: AYR61_RS14715
subclass of: SO_0000673
so part of: AYR61_RS14715
location: complement(27442..27762)
location: region:27442-27762:-1
so has part: feature:27442-27762:-1:exon

WP_065904164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27442-27762:-1:exon

AYR61_RS14720
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14720
old locus tag: AYR61_14780
so part of: sequence
location: complement(27755..29062)
location: region:27755-29062:-1
so has part: feature:27755-29062:-1:exon
subclass of: SO_0000010

position:27755:-1
position: 27755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29062:-1
position: 29062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27755-29062:-1:exon

AYR61_RS14720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14720
old locus tag: AYR61_14780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003587146.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Y-family DNA polymerase
translation: MKLFTDDEPHGVFFLIDNKSFYASCEAVARGLNPLKVPLVVLSEAENTNGGLILATSPEAKHVFHLKANVSRKRDLPNDPSLWVVPPRMNLYIQRNLQINQIFHQFTTEKEVWPYSIDESILDMTHTWRLFGNSVREVARLIQKTVRQKLGLYTTVGIGDNPVQAKLALDLYAKHNHELIGEIHYETVPDKIWSITELTDVWGIGPRMAKRLNRLQIHNMYELAHTNPYLLKQQLGVIGNQLFATAWGIDRAQVTEPTKVKEASLGNSQVLPRDYFNQTEIETVIKEIGEQVAARLRHHHKLAGCLSLSIGFSYAAAEADGRGGFNQALKIEPTNDNQVLTQQLLWLFRQNWDGQAVRNIGVYSSKLSANSGQQLNLFETPRNQIRHSWLNQVIDEIHRQFGFTKLVYATSLLKGGTAIKRASLVGGHNGGNSYE
SIO_010081: AYR61_RS14720
subclass of: SO_0000673
so part of: AYR61_RS14720
location: complement(27755..29062)
location: region:27755-29062:-1
so has part: feature:27755-29062:-1:exon

WP_065904166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27755-29062:-1:exon

AYR61_RS15755
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS15755
so part of: sequence
location: complement(29318..29371)
location: region:29318-29371:-1
so has part: feature:29318-29371:-1:exon
subclass of: SO_0000010

position:29318:-1
position: 29318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29371:-1
position: 29371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29318-29371:-1:exon

AYR61_RS15755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS15755
inference: COORDINATES: protein motif:HMM:NF028245.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNAGFRYVYRSLNRINC
SIO_010081: AYR61_RS15755
subclass of: SO_0000673
so part of: AYR61_RS15755
location: complement(29318..29371)
location: region:29318-29371:-1
so has part: feature:29318-29371:-1:exon

WP_237753404.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29318-29371:-1:exon

AYR61_RS14730
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14730
old locus tag: AYR61_14790
so part of: sequence
location: 29574..30068
location: region:29574-30068:1
so has part: feature:29574-30068:1:exon
subclass of: SO_0000010

position:29574:1
position: 29574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30068:1
position: 30068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29574-30068:1:exon

AYR61_RS14730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14730
old locus tag: AYR61_14790
inference: COORDINATES: protein motif:HMM:NF040152.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5706 domain-containing protein
translation: MDKQLDWIQKSDTKASVLLSAIGVLFTLLINSRFYGVVVNCAHYLFIRDKVVLLVLIILLTIGLILVFTGGFFLFFTLIPRLKNISHEQSHIFFGDISQNGLTELRDYFCKDFDPNNDLVNQIFVNATIANIKMKNCNIGIKFICLGFGTIFLVTLISSIGLSM
SIO_010081: AYR61_RS14730
subclass of: SO_0000673
so part of: AYR61_RS14730
location: 29574..30068
location: region:29574-30068:1
so has part: feature:29574-30068:1:exon

WP_191982315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29574-30068:1:exon

AYR61_RS14735
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14735
old locus tag: AYR61_14795
so part of: sequence
location: 30097..30912
location: region:30097-30912:1
so has part: feature:30097-30912:1:exon
subclass of: SO_0000010

position:30097:1
position: 30097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30912:1
position: 30912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30097-30912:1:exon

AYR61_RS14735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14735
old locus tag: AYR61_14795
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013356299.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenylate/guanylate cyclase domain-containing protein
translation: MASEVAKVTQQDFDLDKALKHVRDILSDNNDFNTVSKWSDLNTLTYKNGRYIANTALFVDIRESSQFLASNDNRIVARLYRSYISEVIMILKNHSCCNEINIVGDCVSAIFTENEDLTQSNYNNDRSDIIEALKSASMIRPTVDIINTLFSKKYDSYTPIKVGIGIASGKALIIKTGQSRTGISKPIFLGENVNLASHLCDKANTDGFSPVLVDEFIKKNSTNYLAGPEPKHETFADWLNESPEKIDEETCYGGDFYRINIHDKLTELENN
SIO_010081: AYR61_RS14735
subclass of: SO_0000673
so part of: AYR61_RS14735
location: 30097..30912
location: region:30097-30912:1
so has part: feature:30097-30912:1:exon

WP_065904173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30097-30912:1:exon

AYR61_RS14740
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14740
old locus tag: AYR61_14800
so part of: sequence
location: 31022..31606
location: region:31022-31606:1
so has part: feature:31022-31606:1:exon
subclass of: SO_0000010

position:31022:1
position: 31022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31606:1
position: 31606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31022-31606:1:exon

AYR61_RS14740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14740
old locus tag: AYR61_14800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014567995.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MAKIGYARVSSKEQHLDRQLAALRGIDKLFTDKLSGANTNRPELQKMLAYIREGDIVLVTELDRLGRNNQDLTKIMNTIQNKGATLDVLNLPSMTGIADPNLRQLMTNLIIELYKYQAESERKRIIERQQQGISLAKQQGKYHGRKPQYTEDDPRLLHAFKLYQTGMSDVDVARNTGIKRTTFIRYRKKCNIKR
SIO_010081: AYR61_RS14740
subclass of: SO_0000673
so part of: AYR61_RS14740
location: 31022..31606
location: region:31022-31606:1
so has part: feature:31022-31606:1:exon

WP_065904180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31022-31606:1:exon

AYR61_RS14745
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14745
old locus tag: AYR61_14805
so part of: sequence
location: 31655..32518
location: region:31655-32518:1
so has part: feature:31655-32518:1:exon
subclass of: SO_0000010

position:31655:1
position: 31655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32518:1
position: 32518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31655-32518:1:exon

AYR61_RS14745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14745
old locus tag: AYR61_14805
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002286155.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MIIQTKGLTKTYQSKVVVDHIDLAIKEGSLTALLGPNGAGKTTTISMLTKILNPTSGMIKMKPDIKISMVFQQSILDNDLTVMENLSIRNKLYKEAKSNHIDALIQKIGLTEFINQKYGRLSGGQRRRVDIARALLNQPDIIFLDEPTTGLDIQTRSAIWKLLHSLQSQNNLTIILTTHYLEEADNADEVYIIDHGKIIASGSADEIKTQNSSSKLVIVSEQANQLMALIPSKIIHTQINHKTICLKANSDEALSLLLKFRIFIKTFTYQEGTMDDAFLSLTGRKMR
SIO_010081: AYR61_RS14745
subclass of: SO_0000673
so part of: AYR61_RS14745
location: 31655..32518
location: region:31655-32518:1
so has part: feature:31655-32518:1:exon

WP_065904182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31655-32518:1:exon

AYR61_RS14750
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14750
old locus tag: AYR61_14810
pseudo: true
so part of: sequence
location: complement(32536..33465)
location: region:32536-33465:-1
so has part: feature:32536-33465:-1:exon
subclass of: SO_0000010

position:32536:-1
position: 32536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33465:-1
position: 33465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32536-33465:-1:exon

AYR61_RS14750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14750
old locus tag: AYR61_14810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_053338758.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS30 family transposase
SIO_010081: AYR61_RS14750
subclass of: SO_0000673
so part of: AYR61_RS14750
location: complement(32536..33465)
location: region:32536-33465:-1
so has part: feature:32536-33465:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32536-33465:-1:exon

AYR61_RS14760
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
gene: ptcA
locus tag: AYR61_RS14760
old locus tag: AYR61_14820
so part of: sequence
location: 33828..34862
location: region:33828-34862:1
so has part: feature:33828-34862:1:exon
subclass of: SO_0000010

position:33828:1
position: 33828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34862:1
position: 34862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33828-34862:1:exon

AYR61_RS14760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
gene: ptcA
locus tag: AYR61_RS14760
old locus tag: AYR61_14820
EC number: 2.1.3.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002295311.1
GO function: GO:0050231 - putrescine carbamoyltransferase activity [Evidence IEA]
GO process: GO:0009445 - putrescine metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putrescine carbamoyltransferase
translation: MAKRDFVDTNTYTQEEIQYMIDLGIKIKESIKNGYYPPLLKNKTLGMIFEQSSTRTRTSAEAAMTELGGHAQYLAPGQIQLGGHETIEDTSQVLGRILDIIGARVDRHKSVADVAKYAKVPVVNFMSDYNHPTQELGDIITMTEHLPEGKKLSDCKIVFVGDATQVCVSTMFMTTKMGMDFVQFGPKGFQMKDDVVKIGKENAKKYGGSVTITEDADEALKDADFVYTDVWYGLYDDEMPKDERMKIFFPKYQVNADLIAKASDHVRFMHCLPATRGEEVTDEVLDSDYSIVWDEAENRKTAMRAIFVYLLNPELKYASKSVAEKYDAEFELMLRNAVDSRNEK
SIO_010081: AYR61_RS14760
subclass of: SO_0000673
so part of: AYR61_RS14760
location: 33828..34862
location: region:33828-34862:1
so has part: feature:33828-34862:1:exon

WP_057910131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33828-34862:1:exon