Secundilactobacillus paracollinoides strain TMW 1.1979 plasmid pL11979-1, complete sequence.
type: Entry
definition: Secundilactobacillus paracollinoides strain TMW 1.1979 plasmid pL11979-1, complete sequence.
sequence version: NZ_CP014913.1
sequence date: 2022-10-22
sequence: sequence
division: CON
label: NZ_CP014913.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN04505735
keyword: RefSeq
source: Secundilactobacillus paracollinoides
organism: Secundilactobacillus paracollinoides
taxonomy: Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Secundilactobacillus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP014913.1.\nSource DNA or bacteria available from the culture collection of the\nTechnische Mikrobiologie Weihenstephan upon request and only if\npermitted by a potential cooperation partner. Individual decisions.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Celera Assembler v. 1\nAssembly Name :: Lparacoll11979-1\nLong Assembly Name :: Lactobacillus paracollinoides TMW 1.1979 1\nGenome Coverage :: 107\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 10/22/2022 03:23:05\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 3,009\nCDSs (total) :: 2,917\nGenes (coding) :: 2,822\nCDSs (with protein) :: 2,822\nGenes (RNA) :: 92\nrRNAs :: 7, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 7, 6, 6 (5S, 16S, 23S)\ntRNAs :: 70\nncRNAs :: 3\nPseudo Genes (total) :: 95\nCDSs (without protein) :: 95\nPseudo Genes (ambiguous residues) :: 0 of 95\nPseudo Genes (frameshifted) :: 51 of 95\nPseudo Genes (incomplete) :: 28 of 95\nPseudo Genes (internal stop) :: 22 of 95\nPseudo Genes (multiple problems) :: 5 of 95\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 50174
topology: circular
so has quality: SO_0000988
location: 1..50174
location: region:1-50174:1
RO_0002162: 240427

NZ_CP014913
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN04505735
type: BioSample
SIO_000068: biosample

1
title: Pediococcus and Lactobacillus from brewery environment - whole genome sequencing and assembly
author: Behr, J.
author: Geissler, A.J.
author: Vogel, R.F.
journal: Unpublished

2
title: Direct Submission
author: Behr, J.
author: Geissler, A.J.
author: Vogel, R.F.
journal: Submitted (18-MAR-2016) Technische Mikrobiologie, Technische Universitaet Muenchen, Gregor-Mendel-Strasse 4, Freising, Bavaria 85354, Germany

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50174:1
position: 50174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-50174:1:source
so part of: sequence
organism: Secundilactobacillus paracollinoides
mol type: genomic DNA
strain: TMW 1.1979
isolation source: beer
plasmid: pL11979-1
country: Japan

240427
type: Taxonomy
SIO_000068: taxonomy

AYR61_RS14255
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14255
old locus tag: AYR61_14315
so part of: sequence
location: complement(join(50003..50174,1..146))
location: region:1-50174:-1
so has part: feature:1-146:-1:exon
so has part: feature:50003-50174:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50174:-1
position: 50174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-146:-1:exon

position:146:-1
position: 146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:50003-50174:-1:exon

position:50003:-1
position: 50003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AYR61_RS14255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14255
old locus tag: AYR61_14315
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MISIAWHKWEYLDKQAVRKDTEGYELADFSYYWQVDDATFILDDVDDINTYLEPYGESGYDTYAELVPALVTTFPEVSYVIYVQDNIFCKDWHEEMKKTGGQPHE
SIO_010081: AYR61_RS14255
subclass of: SO_0000673
so part of: AYR61_RS14255
location: complement(join(50003..50174,1..146))
location: region:1-50174:-1
so has part: feature:1-146:-1:exon
so has part: feature:50003-50174:-1:exon

WP_065904117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:50003-50174:-1:exon

AYR61_RS15230
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS15230
so part of: sequence
location: complement(282..428)
location: region:282-428:-1
so has part: feature:282-428:-1:exon
subclass of: SO_0000010

position:282:-1
position: 282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428:-1
position: 428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282-428:-1:exon

AYR61_RS15230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS15230
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: METLGFGIIVLIVVVTMLAGGIYVRYQKGDVKREFKNFTDDFFGTQGK
SIO_010081: AYR61_RS15230
subclass of: SO_0000673
so part of: AYR61_RS15230
location: complement(282..428)
location: region:282-428:-1
so has part: feature:282-428:-1:exon

WP_156770509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:282-428:-1:exon

AYR61_RS14260
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14260
old locus tag: AYR61_14320
so part of: sequence
location: complement(433..717)
location: region:433-717:-1
so has part: feature:433-717:-1:exon
subclass of: SO_0000010

position:433:-1
position: 433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717:-1
position: 717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433-717:-1:exon

AYR61_RS14260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14260
old locus tag: AYR61_14320
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNAGDDHMEEVQELPDVSKLLSLIADRMADELQPRYLKLHDAPTYVGVTGGTFDKWRKQGLVDVIKIGGINRVDRYDLDRLMLEHKYGPHAGR
SIO_010081: AYR61_RS14260
subclass of: SO_0000673
so part of: AYR61_RS14260
location: complement(433..717)
location: region:433-717:-1
so has part: feature:433-717:-1:exon

WP_191982310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433-717:-1:exon

AYR61_RS14265
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14265
old locus tag: AYR61_14325
so part of: sequence
location: complement(698..1210)
location: region:698-1210:-1
so has part: feature:698-1210:-1:exon
subclass of: SO_0000010

position:698:-1
position: 698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210:-1
position: 1210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:698-1210:-1:exon

AYR61_RS14265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14265
old locus tag: AYR61_14325
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKRKEAVQLDLALNDKQHEITATKLAKSIPVVKSSVTRWRNGKNKMDSSIMKTVAKEIHSVALHYSLARADYNILSFKESKRVSKDLFATTVDQKKEEHDRQEVQDKAFESAAVPKEHRTGKDYECINNYVEQLMEEIGSEITELLTFCKYVGLDANELIKKFNEKCGG
SIO_010081: AYR61_RS14265
subclass of: SO_0000673
so part of: AYR61_RS14265
location: complement(698..1210)
location: region:698-1210:-1
so has part: feature:698-1210:-1:exon

WP_065903998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:698-1210:-1:exon

AYR61_RS14270
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14270
old locus tag: AYR61_14330
so part of: sequence
location: complement(1279..1959)
location: region:1279-1959:-1
so has part: feature:1279-1959:-1:exon
subclass of: SO_0000010

position:1279:-1
position: 1279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1959:-1
position: 1959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1279-1959:-1:exon

AYR61_RS14270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14270
old locus tag: AYR61_14330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013728233.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antA/AntB antirepressor family protein
translation: MNELIKTFKQSNGSIAVDGRDLHNFLEVKERYNDWFKDMQKYGFTENVDFISFTGKRVKPQGGRPQVNHALTLDMAKELSMIQRTKKGKQARQYFISMEKQAQLPQSPAERLQLVMQVTNDQTQRIEKIDSRVTDLEDNQFLAPGEYNYLSKAISKTINNFINAQQTGLNMKQRRELYKDINGGVKKITGIQTRSQLREGDFQNVQDYVSNWVPSTATLALIKQLA
SIO_010081: AYR61_RS14270
subclass of: SO_0000673
so part of: AYR61_RS14270
location: complement(1279..1959)
location: region:1279-1959:-1
so has part: feature:1279-1959:-1:exon

WP_065904001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1279-1959:-1:exon

AYR61_RS14275
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14275
old locus tag: AYR61_14335
so part of: sequence
location: complement(1991..2239)
location: region:1991-2239:-1
so has part: feature:1991-2239:-1:exon
subclass of: SO_0000010

position:1991:-1
position: 1991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2239:-1
position: 2239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1991-2239:-1:exon

AYR61_RS14275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14275
old locus tag: AYR61_14335
inference: COORDINATES: protein motif:HMM:NF024835.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MKNNVRVIREYKKISQTKLAELAGISRPGLSTIENGHKQASLDTAWKIANALNVTVDDVFFNQNVRLVIQGTEHSDKITASS
SIO_010081: AYR61_RS14275
subclass of: SO_0000673
so part of: AYR61_RS14275
location: complement(1991..2239)
location: region:1991-2239:-1
so has part: feature:1991-2239:-1:exon

WP_065904004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1991-2239:-1:exon

AYR61_RS14280
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14280
old locus tag: AYR61_14340
so part of: sequence
location: 2368..3090
location: region:2368-3090:1
so has part: feature:2368-3090:1:exon
subclass of: SO_0000010

position:2368:1
position: 2368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3090:1
position: 3090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2368-3090:1:exon

AYR61_RS14280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14280
old locus tag: AYR61_14340
inference: COORDINATES: protein motif:HMM:NF012920.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XRE family transcriptional regulator
translation: MTGLGRYLSEIRNKRHLSLRDLAKQSEIYDVPISHSTLWAIEKGKNSRGNVPHPSPNQLKTISNVYHVNYEKLMELAGYAPVPQNVRVSPTSDGASITADVGWKTSNEPLDVYGEITAGLPTFADEHIIGQTIIPDDLIDKYGRDNLFALQVDGDSMSKVIAPGFIAVFAKDCEVKNGDICAVLVDGENATLKRFKETSRAVILEPESFNPIYKPLIFPKGTERDFRILGKYVFATSLLN
SIO_010081: AYR61_RS14280
subclass of: SO_0000673
so part of: AYR61_RS14280
location: 2368..3090
location: region:2368-3090:1
so has part: feature:2368-3090:1:exon

WP_065904008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2368-3090:1:exon

AYR61_RS14285
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14285
old locus tag: AYR61_14345
so part of: sequence
location: 3141..3998
location: region:3141-3998:1
so has part: feature:3141-3998:1:exon
subclass of: SO_0000010

position:3141:1
position: 3141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3998:1
position: 3998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3141-3998:1:exon

AYR61_RS14285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14285
old locus tag: AYR61_14345
inference: COORDINATES: protein motif:HMM:NF025826.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4428 domain-containing protein
translation: MSKTCAICGKKVGWFINTQLFDGVLCENCASKLGIQDKFHSYIVTVKTAKKAFNDHKTIDLKKLMVEQKKSRKEAKETENTNYQKQKQQFLKDGSFKYGKLYLDDKAQKILFDKSLLEPFAFYDYSDFTGYKKILIPGTREKHHGIARGITGGIIAGPAGAVVGAVTGGKKYSVVNQLSLELYFKNKNSREIKFLTSSTKTDSFIYRNIYKSFNEVAQKLDEVLKSNQKKSPVQCKPNNQPDKLDSADEIRKFKKLADDGIITQDEFEAKKSNYLACKNKHCPTN
SIO_010081: AYR61_RS14285
subclass of: SO_0000673
so part of: AYR61_RS14285
location: 3141..3998
location: region:3141-3998:1
so has part: feature:3141-3998:1:exon

WP_083220075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3141-3998:1:exon

AYR61_RS14290
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14290
old locus tag: AYR61_14350
so part of: sequence
location: 3998..4357
location: region:3998-4357:1
so has part: feature:3998-4357:1:exon
subclass of: SO_0000010

position:4357:1
position: 4357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3998-4357:1:exon

AYR61_RS14290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14290
old locus tag: AYR61_14350
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKKYELEGIMKLKKSILVGITALTFGMGFSAINISTQTTVQASAHRARVVRGIRVYHLIWGNSFATSRLGKSIYLHPGKIIHIASFYHMGKDGYMLHVNGHGSKLYYARTNSSSWFRY
SIO_010081: AYR61_RS14290
subclass of: SO_0000673
so part of: AYR61_RS14290
location: 3998..4357
location: region:3998-4357:1
so has part: feature:3998-4357:1:exon

WP_191982311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3998-4357:1:exon

AYR61_RS14300
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14300
old locus tag: AYR61_14360
so part of: sequence
location: complement(4926..6350)
location: region:4926-6350:-1
so has part: feature:4926-6350:-1:exon
subclass of: SO_0000010

position:4926:-1
position: 4926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6350:-1
position: 6350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4926-6350:-1:exon

AYR61_RS14300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14300
old locus tag: AYR61_14360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015474353.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S-layer protein
translation: MRKSLAKSIYFGAAALAFAGIVGTTSTTASAKSYATAGAYTALTTGKNVVATGSNAIYSKPGTVKGAKVVASKATVAKLAASKSSADTLYAYATKTTNKGSVYYKVVTMDKKYRGYIYGGKSTSTVAGGIKTTDTTTTAATPARTTGYYLKDASKNTLWTAPKNTDINAKKVSLYGAAKTDPFTVDKAATTTKEGYLYYHVTDSKDPSISGWIYAGKGYDTTITDSTKQDLGGLSLNVAEDAATADNSVKVVYRDANNNNAQVSVSNWVNAPKSGDTATKAGDTVATTAVNSANVKLADFINNSVPANYKISGDVPAATYGNTVYVNVVAAATSKVQLRVDSVNNNVKAKDAAEATEVKLTSPLAVGTKLSSSEFAGVLNSDAIKALSGSKGTAIGDTNLTTIKGGFSNTPVEGTTTYTTSDGTPYHYQFTFEPANFNSDNRTANYGDTLTASFSAQLVTGAANKTASDSSWIA
SIO_010081: AYR61_RS14300
subclass of: SO_0000673
so part of: AYR61_RS14300
location: complement(4926..6350)
location: region:4926-6350:-1
so has part: feature:4926-6350:-1:exon

WP_065904014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4926-6350:-1:exon

AYR61_RS14305
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14305
old locus tag: AYR61_14365
so part of: sequence
location: 6918..7157
location: region:6918-7157:1
so has part: feature:6918-7157:1:exon
subclass of: SO_0000010

position:6918:1
position: 6918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7157:1
position: 7157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6918-7157:1:exon

AYR61_RS14305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14305
old locus tag: AYR61_14365
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTEFTDVFGITHDDCTVVKTLNNYQRIFLIEDHDHIRYVAVKDNAPKNSKLTIHWKSGHAKNIPDNYFGMHKRANEATN
SIO_010081: AYR61_RS14305
subclass of: SO_0000673
so part of: AYR61_RS14305
location: 6918..7157
location: region:6918-7157:1
so has part: feature:6918-7157:1:exon

WP_065904019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6918-7157:1:exon

AYR61_RS14310
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14310
old locus tag: AYR61_14370
so part of: sequence
location: complement(7569..7841)
location: region:7569-7841:-1
so has part: feature:7569-7841:-1:exon
subclass of: SO_0000010

position:7569:-1
position: 7569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7841:-1
position: 7841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7569-7841:-1:exon

AYR61_RS14310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14310
old locus tag: AYR61_14370
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFILDRDRIIKALENAPLVYGYIVNATLFYDEVIKIEPHIFNGCENDKAIHNKIHEAALKLVSKHSKLSDYGVALTDKRENEGRYGYLNS
SIO_010081: AYR61_RS14310
subclass of: SO_0000673
so part of: AYR61_RS14310
location: complement(7569..7841)
location: region:7569-7841:-1
so has part: feature:7569-7841:-1:exon

WP_191982312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7569-7841:-1:exon

AYR61_RS14315
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14315
old locus tag: AYR61_14375
so part of: sequence
location: complement(8013..8294)
location: region:8013-8294:-1
so has part: feature:8013-8294:-1:exon
subclass of: SO_0000010

position:8013:-1
position: 8013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8294:-1
position: 8294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8013-8294:-1:exon

AYR61_RS14315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14315
old locus tag: AYR61_14375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015474677.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BRCT domain-containing protein
translation: MMIDLTNCEIVFTGRLTTMTRQQAIALAQTLGAVPKNWLTAKAAYVVVGVVPATLGHVGVTHKLASAVPTMTESEFLTWASWVLMKWSRNLSG
SIO_010081: AYR61_RS14315
subclass of: SO_0000673
so part of: AYR61_RS14315
location: complement(8013..8294)
location: region:8013-8294:-1
so has part: feature:8013-8294:-1:exon

WP_225356550.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8013-8294:-1:exon

AYR61_RS14320
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14320
old locus tag: AYR61_14380
so part of: sequence
location: complement(9288..10520)
location: region:9288-10520:-1
so has part: feature:9288-10520:-1:exon
subclass of: SO_0000010

position:9288:-1
position: 9288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10520:-1
position: 10520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9288-10520:-1:exon

AYR61_RS14320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14320
old locus tag: AYR61_14380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020089731.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA-guided endonuclease TnpB family protein
translation: MSEFKYHYGIKMRIFPSREQKHQLDNNINASRFAYNEMVAIDKELFQLRKVKCYIASVVNRIAYLQKRKNNTQMLFALHPWLSGTNVGTDVVDQARRAYQSAWRLFRQVHRSGTPKFHKKQMSGSFQLPNRYAKVQPNLFNGSCRFLDSKHVKISLIGRLRVSGSHRRLFSCGNDVRIGTITVSRDATGRYYLSMQLGSDTPFVVGGKQQISPVGIDLNTDNFLTDSNGNIVANPRYYRSIKGKLAKAQRKLSRRALRAKKENRPLREAKNYQKQRVLVATLQRKVANQRNNFLHLVSTTLIKNHDLVVAEELRSKNMLRNHALAMSIADVGWRTFLGMLAYKADLYGHKFVTVNPRNTTQTCSECGYLMCGDKKLTLKDREWTCPQCGNHHIRDWNAAKNILKKGLASA
SIO_010081: AYR61_RS14320
subclass of: SO_0000673
so part of: AYR61_RS14320
location: complement(9288..10520)
location: region:9288-10520:-1
so has part: feature:9288-10520:-1:exon

WP_065903756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9288-10520:-1:exon

AYR61_RS14325
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
gene: tnpA
locus tag: AYR61_RS14325
old locus tag: AYR61_14385
so part of: sequence
location: 10625..11071
location: region:10625-11071:1
so has part: feature:10625-11071:1:exon
subclass of: SO_0000010

position:10625:1
position: 10625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11071:1
position: 11071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10625-11071:1:exon

AYR61_RS14325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
gene: tnpA
locus tag: AYR61_RS14325
old locus tag: AYR61_14385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003607724.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS200/IS605 family transposase
translation: MSKENAKHERGYVYNFHFHLVWVTKYRKQIFNTPRFAKEMLTILQNIANQNEIEIEKGEVMLDHIHLLISFKPKYAPANIVKVLKGVSAREWFKIHPETRQIVWGGHLWSPSYYMGTLGDMSKETVEHYIENQRTERGKAGRPLLKRN
SIO_010081: AYR61_RS14325
subclass of: SO_0000673
so part of: AYR61_RS14325
location: 10625..11071
location: region:10625-11071:1
so has part: feature:10625-11071:1:exon

WP_065901646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10625-11071:1:exon

AYR61_RS14330
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14330
old locus tag: AYR61_14390
so part of: sequence
location: 11133..11921
location: region:11133-11921:1
so has part: feature:11133-11921:1:exon
subclass of: SO_0000010

position:11133:1
position: 11133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11921:1
position: 11921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11133-11921:1:exon

AYR61_RS14330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14330
old locus tag: AYR61_14390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003645724.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MRAKTLLHFNFKGGVGKTTLSVMNTYLLGANKSKVLLIDLDPQANATEIMKSTFNKEIEPAVSLYNGLLNLDLSKSVVTLTDNISIIPADWELSLWPGKAEKIKSHDRMLILSELIKSFKEQFDYIIIDVPPTLSIFTNNAILASDYISLVLQTQKQAYTSVLKTAQYMFQLKSDYQASFNVAGVILYLVKKDAKVDKEITQAAIDSFGDAVFSNRIWQQERVKLFSNEGIKNEDHWDKRAIGMYDMVLKEQLKRIGEMENG
SIO_010081: AYR61_RS14330
subclass of: SO_0000673
so part of: AYR61_RS14330
location: 11133..11921
location: region:11133-11921:1
so has part: feature:11133-11921:1:exon

WP_065904027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11133-11921:1:exon

AYR61_RS14335
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14335
old locus tag: AYR61_14395
so part of: sequence
location: 11914..12147
location: region:11914-12147:1
so has part: feature:11914-12147:1:exon
subclass of: SO_0000010

position:11914:1
position: 11914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12147:1
position: 12147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11914-12147:1:exon

AYR61_RS14335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14335
old locus tag: AYR61_14395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015639781.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MANDFLGKLAKQANQQLGDNESPFKQKKEVTRPVQVREGTYKMIKDIAYHKEAKIVDVIDSMLKYAINSGEFDDSNK
SIO_010081: AYR61_RS14335
subclass of: SO_0000673
so part of: AYR61_RS14335
location: 11914..12147
location: region:11914-12147:1
so has part: feature:11914-12147:1:exon

WP_065904029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11914-12147:1:exon

AYR61_RS14340
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14340
old locus tag: AYR61_14400
so part of: sequence
location: 12203..12496
location: region:12203-12496:1
so has part: feature:12203-12496:1:exon
subclass of: SO_0000010

position:12203:1
position: 12203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12496:1
position: 12496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12203-12496:1:exon

AYR61_RS14340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14340
old locus tag: AYR61_14400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011222016.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5388 domain-containing protein
translation: MNKKRATIIFDEDVSDQTISVDKSVSSVTFDTTLRIDNHLKNFMKAVVISGYSLTQQNGLAQLQKNFFESLTESEQNTLTTQIQTLETGDANKVKSK
SIO_010081: AYR61_RS14340
subclass of: SO_0000673
so part of: AYR61_RS14340
location: 12203..12496
location: region:12203-12496:1
so has part: feature:12203-12496:1:exon

WP_065904032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12203-12496:1:exon

AYR61_RS14345
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14345
old locus tag: AYR61_14405
so part of: sequence
location: complement(12648..12920)
location: region:12648-12920:-1
so has part: feature:12648-12920:-1:exon
subclass of: SO_0000010

position:12648:-1
position: 12648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12920:-1
position: 12920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12648-12920:-1:exon

AYR61_RS14345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14345
old locus tag: AYR61_14405
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLDHWTELITVGIAVTGGVYAALMVILKPFINDLKRVALSMSETTRKIERLIDSQNSMHEELIASKGEHQVINQRIDNIEEDVSELKRK
SIO_010081: AYR61_RS14345
subclass of: SO_0000673
so part of: AYR61_RS14345
location: complement(12648..12920)
location: region:12648-12920:-1
so has part: feature:12648-12920:-1:exon

WP_065904035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12648-12920:-1:exon

AYR61_RS14350
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14350
old locus tag: AYR61_14410
so part of: sequence
location: complement(12920..13474)
location: region:12920-13474:-1
so has part: feature:12920-13474:-1:exon
subclass of: SO_0000010

position:13474:-1
position: 13474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12920-13474:-1:exon

AYR61_RS14350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14350
old locus tag: AYR61_14410
inference: COORDINATES: protein motif:HMM:NF013357.2
GO function: GO:0003796 - lysozyme activity [Evidence IEA]
GO process: GO:0016998 - cell wall macromolecule catabolic process [Evidence IEA]; GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GH25 family lysozyme
translation: MALDVEYQGLPKDTTNQVNAFLNYLKAQGYSHVITYGSGSWFKYGRINRSSLVDHRIWVAAYGVTEPGIANANAWQFTDNYRGLKVDASYDYDGSLSGSAATTKKAKPAYWSTNGLYEVIADHINVYGKIALDKAHQRRIHFTKGSTIYGKAVKYGKVYRIKTDVGYISANKDYVKLVRKSGDQ
SIO_010081: AYR61_RS14350
subclass of: SO_0000673
so part of: AYR61_RS14350
location: complement(12920..13474)
location: region:12920-13474:-1
so has part: feature:12920-13474:-1:exon

WP_065904039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12920-13474:-1:exon

AYR61_RS15025
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS15025
pseudo: true
so part of: sequence
location: complement(<13495..14129)
location: region:13495-14129:-1
so has part: feature:13495-14129:-1:exon
subclass of: SO_0000010

position:13495:-1
position: 13495
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:14129:-1
position: 14129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13495-14129:-1:exon

AYR61_RS15025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS15025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013355633.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: terminase large subunit
SIO_010081: AYR61_RS15025
subclass of: SO_0000673
so part of: AYR61_RS15025
location: complement(<13495..14129)
location: region:13495-14129:-1
so has part: feature:13495-14129:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13495-14129:-1:exon

AYR61_RS14365
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14365
old locus tag: AYR61_14425
so part of: sequence
location: complement(14319..15041)
location: region:14319-15041:-1
so has part: feature:14319-15041:-1:exon
subclass of: SO_0000010

position:14319:-1
position: 14319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15041:-1
position: 15041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14319-15041:-1:exon

AYR61_RS14365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14365
old locus tag: AYR61_14425
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPKKKTSKEYLDELKKVWGCEYTVLTEYVNQKTKIKVLHTKCGNVYETYPMNLVRGHKCRYCSNRALKSNGEFLKELKEIDTTLIPLDKYQGANQKIDFRCSICGNIMKRTPSSVINGHKKCGYCSSRLGMDEKIKRFLELNEKGKYIFVKRGRNPNVKSREQYIWFQHQKCGTIFCTTWYHFKIEGTRCPHCKESKGERAIYAFLSVRKIPFVAQKNLKIAETEQNCRLTSIYQKKTSA
SIO_010081: AYR61_RS14365
subclass of: SO_0000673
so part of: AYR61_RS14365
location: complement(14319..15041)
location: region:14319-15041:-1
so has part: feature:14319-15041:-1:exon

WP_065904047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14319-15041:-1:exon

AYR61_RS15750
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS15750
so part of: sequence
location: 15136..15264
location: region:15136-15264:1
so has part: feature:15136-15264:1:exon
subclass of: SO_0000010

position:15136:1
position: 15136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15264:1
position: 15264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15136-15264:1:exon

AYR61_RS15750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS15750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003108378.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKKFTTTLDSDLIQQIKIKAIKENTSVASLLEKLIKDYLNK
SIO_010081: AYR61_RS15750
subclass of: SO_0000673
so part of: AYR61_RS15750
location: 15136..15264
location: region:15136-15264:1
so has part: feature:15136-15264:1:exon

WP_263850111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15136-15264:1:exon

AYR61_RS15035
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS15035
pseudo: true
so part of: sequence
location: 15421..16208
location: region:15421-16208:1
so has part: feature:15421-16208:1:exon
subclass of: SO_0000010

position:15421:1
position: 15421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16208:1
position: 16208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15421-16208:1:exon

AYR61_RS15035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS15035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013727908.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: AYR61_RS15035
subclass of: SO_0000673
so part of: AYR61_RS15035
location: 15421..16208
location: region:15421-16208:1
so has part: feature:15421-16208:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15421-16208:1:exon

AYR61_RS15040
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS15040
pseudo: true
so part of: sequence
location: <16217..16516
location: region:16217-16516:1
so has part: feature:16217-16516:1:exon
subclass of: SO_0000010

position:16217:1
position: 16217
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:16516:1
position: 16516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16217-16516:1:exon

AYR61_RS15040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS15040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013728366.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: CTP synthase
SIO_010081: AYR61_RS15040
subclass of: SO_0000673
so part of: AYR61_RS15040
location: <16217..16516
location: region:16217-16516:1
so has part: feature:16217-16516:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16217-16516:1:exon

AYR61_RS14380
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14380
old locus tag: AYR61_14440
so part of: sequence
location: 16713..17264
location: region:16713-17264:1
so has part: feature:16713-17264:1:exon
subclass of: SO_0000010

position:16713:1
position: 16713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17264:1
position: 17264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16713-17264:1:exon

AYR61_RS14380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14380
old locus tag: AYR61_14440
inference: COORDINATES: protein motif:HMM:NF012655.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MADTQSQQRTKRDILQAMMTILRKKKFDDITIGEICDEAMIHRSTFYRYFQDKVDLANTIIYNLSEELLGTDFRENVVLTQVTHFISDNIDLIRHLIPESQSKFYDEFRNILENLFNERANNPAYQNDPVVTLIKQSSSQPLMISFLANTIMGFLEEQLLKSNIDWPQLESFLISIINKLNAQ
SIO_010081: AYR61_RS14380
subclass of: SO_0000673
so part of: AYR61_RS14380
location: 16713..17264
location: region:16713-17264:1
so has part: feature:16713-17264:1:exon

WP_065904050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16713-17264:1:exon

AYR61_RS14385
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14385
old locus tag: AYR61_14445
so part of: sequence
location: complement(17395..20037)
location: region:17395-20037:-1
so has part: feature:17395-20037:-1:exon
subclass of: SO_0000010

position:17395:-1
position: 17395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20037:-1
position: 20037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17395-20037:-1:exon

AYR61_RS14385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14385
old locus tag: AYR61_14445
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014940246.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydrophobe/amphiphile efflux-3 (HAE3) family transporter
translation: MKRLFTTIGENIHRHHKLWITVILIMIIGFAFGLPKIQMKMGNNVFVSSSSKTYQDSQTYQKKFGGDSLYLLLDGNQSTLLSHKTMQQVAKFDSKVSQVDNVRNTTDIVSSLNDQLSHAGTGNSSAQFNFNSKKLQQDLMAELSSKQKQSIQSKMQHSLTSTQQNQVQTYLLKQLTPAQKKLMAAVGAQAQGSKQQQQAMLQKQLTTKQQAAVQSYTMSLLNHQQQSQLADTVIPMLPKVQDMSTKLLRDIFLSDNGHVPSAMKQLLPKDGKHLLIIINTNKESSDMNTAVQINHDANQAIKQTNFSSSIKTRLGGQPAVLGQVRSKVITSMATLLAFAVVLMVIILLLIFSVRKRLLPLIFVLACLVWTFGLMGWLHIPLTLATMATLPIIIGLGTDFGVQFQNRYEEEVRKRQNSKEAISVAISSMGPAVGVSLIVMVFSFLTMYLSKAPLMQQFGLTLAIGVACSYVVEFGLMFSSLSLLDKHASTAKLAPKKLSQPSRLSLFLSHYAEWVTHHAGILLTIGVVLAGLGFSFEKSINIETDFTKMIPQNMTALKNTKYLQSKIGSTTYLTYLVEGNGQDIRDQDNLKTIDQVGQKVDHKYHDVTDVTSLSTAYQQTNGSLNTSQKQLTVGVDNLPTSLKQTLISSNHHDATIQFKIRNGLSSKEQLKLMNRINHDIKGIHHGLKISPAGAQVMMLLGINNMSANHDLIIIAGLSIIFIVLFLIYRDWRLALYPVIPILLVLGLSPLTLKLLGISYNPVTIALSSLVLGIGTEFTILILERYREELQRGNSTRDAIVSATASVGQAITVSGFTVMGGFSAIMFSSFPVLKSFGLITVLDTGYSLICALTILPAVIYLLRKRKPAATQSSSEQATERDD
SIO_010081: AYR61_RS14385
subclass of: SO_0000673
so part of: AYR61_RS14385
location: complement(17395..20037)
location: region:17395-20037:-1
so has part: feature:17395-20037:-1:exon

WP_065904051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17395-20037:-1:exon

AYR61_RS15045
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS15045
so part of: sequence
location: 20299..20436
location: region:20299-20436:1
so has part: feature:20299-20436:1:exon
subclass of: SO_0000010

position:20299:1
position: 20299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20436:1
position: 20436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20299-20436:1:exon

AYR61_RS15045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS15045
inference: COORDINATES: protein motif:HMM:NF017524.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid mobilization relaxosome protein MobC
translation: MLQKLAKIGGNLNQLAHHANQGGQIDPQALKDLQNEVQRVWQQLT
SIO_010081: AYR61_RS15045
subclass of: SO_0000673
so part of: AYR61_RS15045
location: 20299..20436
location: region:20299-20436:1
so has part: feature:20299-20436:1:exon

WP_083220079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20299-20436:1:exon

AYR61_RS15635
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS15635
pseudo: true
so part of: sequence
location: 20418..>21095
location: region:20418-21095:1
so has part: feature:20418-21095:1:exon
subclass of: SO_0000010

position:20418:1
position: 20418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21095:1
position: 21095
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20418-21095:1:exon

AYR61_RS15635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS15635
inference: COORDINATES: protein motif:HMM:NF015397.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
SIO_010081: AYR61_RS15635
subclass of: SO_0000673
so part of: AYR61_RS15635
location: 20418..>21095
location: region:20418-21095:1
so has part: feature:20418-21095:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20418-21095:1:exon

AYR61_RS15640
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS15640
so part of: sequence
location: 21145..21723
location: region:21145-21723:1
so has part: feature:21145-21723:1:exon
subclass of: SO_0000010

position:21145:1
position: 21145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21723:1
position: 21723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21145-21723:1:exon

AYR61_RS15640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS15640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015639714.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Mobilization protein MobB
translation: MSWQADKPKQEPTSNQNEPLTQQLTQLNQTIAELRNYQGTQIQLQATAKTSLDQQLHQIEQTAQQVNQQFQTTLNNLDSSNASSQAQLKQTLQSAYAAFQKQTNLISQENLTALKQIQTEQAKNNQRLSQLSDQVNQTIQETMAQVADQMDQQLQTTKKRFSWYEIKNYLLAVIPTGILTGLIFWLLTKYFG
SIO_010081: AYR61_RS15640
subclass of: SO_0000673
so part of: AYR61_RS15640
location: 21145..21723
location: region:21145-21723:1
so has part: feature:21145-21723:1:exon

WP_225356549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21145-21723:1:exon

AYR61_RS14395
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14395
old locus tag: AYR61_14455
so part of: sequence
location: complement(21945..23051)
location: region:21945-23051:-1
so has part: feature:21945-23051:-1:exon
subclass of: SO_0000010

position:21945:-1
position: 21945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23051:-1
position: 23051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21945-23051:-1:exon

AYR61_RS14395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14395
old locus tag: AYR61_14455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007124949.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MMDQTNFKFYQADNVYGALFFQFPKVLMYGEQYRYLSSEAKLAYMVLKDRLEYSLRNHWVDEEDHVYFIFTNQELMDLFNCSKGKLATVKKELEKAGLLYQKAMHFNPKTGKNEPNRLYLAELDMRSTDVYLRGEYGQKEPQTLATSESLKNRPSRETVETLATSESLKNRPSRKSVDDTPQTLATSESLKNRHDLDKELKERDANRYNIDTQKLDFSTAHFSPAEIQKQNQDLVNHANDFLTDEDNGLPVFLEPEAVQLLSFWCRTPQQMRRFIGIILNAKYRVEKDHQDIGVLIPLDDEELKSLMTKALRRYFNALRSNEKHIKNVENYLYGTMQNLFGVWWNKQAAREYAAKHPEEFKNQGALSD
SIO_010081: AYR61_RS14395
subclass of: SO_0000673
so part of: AYR61_RS14395
location: complement(21945..23051)
location: region:21945-23051:-1
so has part: feature:21945-23051:-1:exon

WP_191982314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21945-23051:-1:exon

AYR61_RS14400
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14400
old locus tag: AYR61_14460
so part of: sequence
location: 23703..24275
location: region:23703-24275:1
so has part: feature:23703-24275:1:exon
subclass of: SO_0000010

position:23703:1
position: 23703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24275:1
position: 24275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23703-24275:1:exon

AYR61_RS14400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14400
old locus tag: AYR61_14460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010620856.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF536 domain-containing protein
translation: MKLLGKTIRQLSEELKLSKQAINQRINSLNGFRSKHTYKVKNHLEIDNQGVKLLVNFDKQKRQERQPNRQDKNDKGENIDHILLKQLDVKDQQIANLQQALDQQQKLQIATVAENHQLKEHVRKLNGLLEISSSTKKQQANNKEEASPNNANTSHINDKNDKQNGNKVAEYGDRQKKVSSKANKSWWHFW
SIO_010081: AYR61_RS14400
subclass of: SO_0000673
so part of: AYR61_RS14400
location: 23703..24275
location: region:23703-24275:1
so has part: feature:23703-24275:1:exon

WP_225356552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23703-24275:1:exon

AYR61_RS14405
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14405
old locus tag: AYR61_14465
so part of: sequence
location: 24309..25199
location: region:24309-25199:1
so has part: feature:24309-25199:1:exon
subclass of: SO_0000010

position:24309:1
position: 24309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25199:1
position: 25199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24309-25199:1:exon

AYR61_RS14405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14405
old locus tag: AYR61_14465
inference: COORDINATES: protein motif:HMM:NF014533.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-processing protein DprA
translation: MVYKKNKKYYFFWMFHIGIAKSTLSQIHKKLSFDDMVNIYNGHFLDYAISKIRFLKKDVDILSDNAFLANSKHEVSKIFTNFTKFGVKVVFFYDDLYPVLLKEIPNPPFVLFARGNYAQLDKIKLISVAGSRQISTRSAIKLRHIITELVQKNYGIVSGLALGTDIIANETAYKDRGYSVAVLPSSIFSILPKTNVASAEKLLKNGGLLISEYYDNNFSKSRYIQRNRIISGLGSAVLLPEFKARSGTIHTARFAWLQNKKIFCFNNDSSGVQKVLASGNAFVFNSTEDLIKRIGE
SIO_010081: AYR61_RS14405
subclass of: SO_0000673
so part of: AYR61_RS14405
location: 24309..25199
location: region:24309-25199:1
so has part: feature:24309-25199:1:exon

WP_065904065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24309-25199:1:exon

AYR61_RS14410
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14410
old locus tag: AYR61_14470
so part of: sequence
location: 25205..26371
location: region:25205-26371:1
so has part: feature:25205-26371:1:exon
subclass of: SO_0000010

position:25205:1
position: 25205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26371:1
position: 26371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25205-26371:1:exon

AYR61_RS14410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14410
old locus tag: AYR61_14470
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: phosphoribosyltransferase
translation: MTNIFYSKDFFLSNIDVNSAKDFISYAASNKINLILISHSDINSNSDIIKFLGPLVPEKDMHGFQFLTREKSKISDFIKNNPGKNIFIGNKEEDLFKASSLKCLYLCPMWTDNIDEKSKKYGIHIKDLKHLIQVIQILINQNAFYYELKINNVSTVYALTSANNISATEDENSVINAFRSTLKNGNSKYLDAITLYLLSGIMSLPEIMETEIWGIMPSSGTNINEEMSQILTQCRYLTDRRLKEPLLIRHTPTQKSHWTEPSTRLSVGALKHLKSIKINPKYRGKITGKKITILDDYITNGCSFEAVRNLLISAGASEVNFIAIGRFKSRKYNGLGIYQKEEYSLTGDLFSDNYTSSLSKRESDYGLHGKYNVDARQDVENLKDILEL
SIO_010081: AYR61_RS14410
subclass of: SO_0000673
so part of: AYR61_RS14410
location: 25205..26371
location: region:25205-26371:1
so has part: feature:25205-26371:1:exon

WP_065904068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25205-26371:1:exon

AYR61_RS14415
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14415
old locus tag: AYR61_14475
so part of: sequence
location: complement(26494..26850)
location: region:26494-26850:-1
so has part: feature:26494-26850:-1:exon
subclass of: SO_0000010

position:26494:-1
position: 26494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26850:-1
position: 26850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26494-26850:-1:exon

AYR61_RS14415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14415
old locus tag: AYR61_14475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002834562.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system YafQ family toxin
translation: MKKLRFKPRATFNADLKRLASLDKSIIDEVRAAIDLLLEQQQLPPEFEDHELNRRMSGYNEFHLRDTPKNKTPSETNDVLVVYTIDTDELVLIGIRVGSHDRLFPGQNRSKRYRKNEE
SIO_010081: AYR61_RS14415
subclass of: SO_0000673
so part of: AYR61_RS14415
location: complement(26494..26850)
location: region:26494-26850:-1
so has part: feature:26494-26850:-1:exon

WP_056991846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26494-26850:-1:exon

AYR61_RS14420
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14420
old locus tag: AYR61_14480
so part of: sequence
location: complement(26850..27128)
location: region:26850-27128:-1
so has part: feature:26850-27128:-1:exon
subclass of: SO_0000010

position:27128:-1
position: 27128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26850-27128:-1:exon

AYR61_RS14420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14420
old locus tag: AYR61_14480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003586674.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system prevent-host-death family antitoxin
translation: MTLALTQSDFRANLKKYLDQVNDEDETVYIARSNSRAVAIVSQEKMDWLERALKAKEGSLEYAIARDQLIKRHVLPDDEIVESDDDYWGQFK
SIO_010081: AYR61_RS14420
subclass of: SO_0000673
so part of: AYR61_RS14420
location: complement(26850..27128)
location: region:26850-27128:-1
so has part: feature:26850-27128:-1:exon

WP_003586674.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26850-27128:-1:exon

AYR61_RS14425
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14425
old locus tag: AYR61_14485
so part of: sequence
location: 27205..27792
location: region:27205-27792:1
so has part: feature:27205-27792:1:exon
subclass of: SO_0000010

position:27205:1
position: 27205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27792:1
position: 27792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27205-27792:1:exon

AYR61_RS14425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14425
old locus tag: AYR61_14485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005917937.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MQQVVLPIKDSNVLKEVQDTLLNNFKAGRRNYTVFQVGKATLLRVSDVMRLKQTDIFNPDGSIKQNAFIHDRKTGKPNTLYLKPVQTELLLYRQWLLDHRLASEWLFPSIQHPERHITEKQFYKIMSKVGDLLGINYLGTHTMRKTGAYRAYTQSNYNIGLVMNLLNHSSEAMTLAYLGLDQASTETMLDQIDFG
SIO_010081: AYR61_RS14425
subclass of: SO_0000673
so part of: AYR61_RS14425
location: 27205..27792
location: region:27205-27792:1
so has part: feature:27205-27792:1:exon

WP_065904070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27205-27792:1:exon

AYR61_RS14430
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14430
old locus tag: AYR61_14490
so part of: sequence
location: 27844..28215
location: region:27844-28215:1
so has part: feature:27844-28215:1:exon
subclass of: SO_0000010

position:27844:1
position: 27844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28215:1
position: 28215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27844-28215:1:exon

AYR61_RS14430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14430
old locus tag: AYR61_14490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003636737.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MEKPEFETYKRPNGHDEFDEWLQQLPIKDRAKLLQVITDTQDQGLLVAQRMTWVKKIESAKNLYELRSKVSSNIQRALYFHVKGPKYVITHGFTKKTQKTPPAEIKHAIELRTEWEDSQNENQ
SIO_010081: AYR61_RS14430
subclass of: SO_0000673
so part of: AYR61_RS14430
location: 27844..28215
location: region:27844-28215:1
so has part: feature:27844-28215:1:exon

WP_001748275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27844-28215:1:exon

AYR61_RS14435
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14435
old locus tag: AYR61_14495
so part of: sequence
location: 28202..28471
location: region:28202-28471:1
so has part: feature:28202-28471:1:exon
subclass of: SO_0000010

position:28202:1
position: 28202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28471:1
position: 28471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28202-28471:1:exon

AYR61_RS14435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14435
old locus tag: AYR61_14495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001748276.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MKINDILTRELKDPKFAEAYHADKEKSASALALYHTREEAGLTQADLAERANVPQSTIARIERGDNVTFDKLAEIAHAMGKTIKIEFTQ
SIO_010081: AYR61_RS14435
subclass of: SO_0000673
so part of: AYR61_RS14435
location: 28202..28471
location: region:28202-28471:1
so has part: feature:28202-28471:1:exon

WP_001748276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28202-28471:1:exon

AYR61_RS14440
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
gene: arsC
locus tag: AYR61_RS14440
old locus tag: AYR61_14500
so part of: sequence
location: complement(28695..29111)
location: region:28695-29111:-1
so has part: feature:28695-29111:-1:exon
subclass of: SO_0000010

position:28695:-1
position: 28695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29111:-1
position: 29111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28695-29111:-1:exon

AYR61_RS14440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
gene: arsC
locus tag: AYR61_RS14440
old locus tag: AYR61_14500
EC number: 1.20.4.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004563097.1
GO function: GO:0030612 - arsenate reductase (thioredoxin) activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arsenate reductase (thioredoxin)
translation: MTQIYFLCTGNACRSQMAEGFAKKILGNDWRVASAGVEVHGLNPLAVKVMAEKGIDISQQTSKLIDPDYLLHSDLVVTLCGDARDRCPVTPPTVKKKHWPLPDPALAAGSEQDRIVVFRKVRDQIEQQIIDLAKVGNL
SIO_010081: AYR61_RS14440
subclass of: SO_0000673
so part of: AYR61_RS14440
location: complement(28695..29111)
location: region:28695-29111:-1
so has part: feature:28695-29111:-1:exon

WP_004563097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28695-29111:-1:exon

AYR61_RS14445
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
gene: arsD
locus tag: AYR61_RS14445
old locus tag: AYR61_14505
so part of: sequence
location: complement(29134..29469)
location: region:29134-29469:-1
so has part: feature:29134-29469:-1:exon
subclass of: SO_0000010

position:29134:-1
position: 29134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29469:-1
position: 29469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29134-29469:-1:exon

AYR61_RS14445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
gene: arsD
locus tag: AYR61_RS14445
old locus tag: AYR61_14505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013721068.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arsenite efflux transporter metallochaperone ArsD
translation: MKKIELFEPAMCCSTGVCGPSVDKELIQTTAIQRYVSVNAQGQAMFIRRNLAQNPDAFVRNPIVAQELKRQGINALPITLVDGQLVKTGEYPTINEFSSYLDMDLVAALVH
SIO_010081: AYR61_RS14445
subclass of: SO_0000673
so part of: AYR61_RS14445
location: complement(29134..29469)
location: region:29134-29469:-1
so has part: feature:29134-29469:-1:exon

WP_025013532.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29134-29469:-1:exon

AYR61_RS14450
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14450
old locus tag: AYR61_14510
so part of: sequence
location: complement(29506..30801)
location: region:29506-30801:-1
so has part: feature:29506-30801:-1:exon
subclass of: SO_0000010

position:29506:-1
position: 29506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30801:-1
position: 30801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29506-30801:-1:exon

AYR61_RS14450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14450
old locus tag: AYR61_14510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003682896.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arsenic transporter
translation: MQVFFAVGIFLLTLLFVIWQPRGLSIGWTAVGGAILALLFGVVSFKDVGTVTGIVWNATLSFVAIILISLILDQIGFFEWAALHMARWANGHGIRMFILVTTLGAVVAALFANDGAALILTPIVLAMVRALHFDEKQVFPFIIASGFIADTTSLPMIVSNLVNIVSADFFGISFSAYALRMWIPDLFSLLGSIGILYLYFRKALPRKFDATQVAEPSSALKDQRLFKFSWVVLILLLIGYFSSGFLGIPVSFIALSIAAIFLIVGQRSSHVNAMAAIKGAPWNIVFFSIGMYVVVYGLQNVGLTTLLSGVITEIAKGGRFAATMGMGYLAALLSSLMNNMPTVMINALSIKGADVSGLIHHTLVYANIIGSDLGPKITPIGSLATLVWLHVLAQKGVKIKWGTYFKIGIVTTIPVLFITLCGLWLSLSIFG
SIO_010081: AYR61_RS14450
subclass of: SO_0000673
so part of: AYR61_RS14450
location: complement(29506..30801)
location: region:29506-30801:-1
so has part: feature:29506-30801:-1:exon

WP_003582109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29506-30801:-1:exon

AYR61_RS14455
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
gene: arsA
locus tag: AYR61_RS14455
old locus tag: AYR61_14515
so part of: sequence
location: complement(30845..32575)
location: region:30845-32575:-1
so has part: feature:30845-32575:-1:exon
subclass of: SO_0000010

position:30845:-1
position: 30845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32575:-1
position: 32575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30845-32575:-1:exon

AYR61_RS14455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
gene: arsA
locus tag: AYR61_RS14455
old locus tag: AYR61_14515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016368213.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0015446 - ATPase-coupled arsenite transmembrane transporter activity [Evidence IEA]
GO process: GO:0071722 - detoxification of arsenic-containing substance [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arsenical pump-driving ATPase
translation: MEKYSPQEINLTKYLFFTGKGGVGKTTVASATAISLADAGHRVMIVSTDPASNLQDVFKVSLTNQPKPIPNISGLFAANFDPVIAANEYREQVIQPYRGVLPKEAIQNMAEQLSGSCTVEIAAFDEFANFLTSSKINQQFDYIIFDTAPTGHTLRMLQLPSAWSNYLDKNDRGASCLGQLAGLNDKKAMYQKAVETLGNPQATTLFLVTRPQKGALLEAQRASHELAALNIKNQQLIINGILNQPTDAVSQTIFKQQQADLQNMPVTLDQLPKLAIPLRAYNVLGLANLRLLLKDQQPQITEEPVTASHFPDLDVVVKNLVQSNKKIIFTMGKGGVGKTTVAVQIAQKIAAQHKTVHLATTDPADHLKYFKITSPLIKVSHIDEKKSLKEYQNEVLTTAKKTMKSNDVDYVAEDLRSPCTQEIAVFRAFAELVAQNDSDVVVVDTAPTGHTLLLLNSTQSYAQEVAHTSGSVPQAVVNLLPRLQDPKQTEIVMVTLPEATPVYESMRLDDDLKRASLAHTWWVVNQSMLATQTTDPCLLARVQSEVKWIDQVKELSNNHFAVMQWQPNYEKTLLTV
SIO_010081: AYR61_RS14455
subclass of: SO_0000673
so part of: AYR61_RS14455
location: complement(30845..32575)
location: region:30845-32575:-1
so has part: feature:30845-32575:-1:exon

WP_065904072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30845-32575:-1:exon

AYR61_RS14460
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14460
old locus tag: AYR61_14520
so part of: sequence
location: complement(32626..32949)
location: region:32626-32949:-1
so has part: feature:32626-32949:-1:exon
subclass of: SO_0000010

position:32626:-1
position: 32626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32949:-1
position: 32949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32626-32949:-1:exon

AYR61_RS14460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14460
old locus tag: AYR61_14520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003582114.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloregulator ArsR/SmtB family transcription factor
translation: MDYQNYVQMLKAMADPNRLKIIDLLSCGSLCACDILQHFDFSQPTLSHHMKVLQNAGIVFAVKDGKWQHYSLQKRFVQEFKQNTDQLLAADEHCLCQRSDREKDVAN
SIO_010081: AYR61_RS14460
subclass of: SO_0000673
so part of: AYR61_RS14460
location: complement(32626..32949)
location: region:32626-32949:-1
so has part: feature:32626-32949:-1:exon

WP_065904076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32626-32949:-1:exon

AYR61_RS15240
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS15240
pseudo: true
so part of: sequence
location: <33022..33129
location: region:33022-33129:1
so has part: feature:33022-33129:1:exon
subclass of: SO_0000010

position:33022:1
position: 33022
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:33129:1
position: 33129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33022-33129:1:exon

AYR61_RS15240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS15240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003682896.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: AYR61_RS15240
subclass of: SO_0000673
so part of: AYR61_RS15240
location: <33022..33129
location: region:33022-33129:1
so has part: feature:33022-33129:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33022-33129:1:exon

AYR61_RS14465
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14465
old locus tag: AYR61_14525
so part of: sequence
location: 33185..33526
location: region:33185-33526:1
so has part: feature:33185-33526:1:exon
subclass of: SO_0000010

position:33185:1
position: 33185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33526:1
position: 33526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33185-33526:1:exon

AYR61_RS14465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14465
old locus tag: AYR61_14525
inference: COORDINATES: protein motif:HMM:NF013676.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MEQLNKGEARHALCRNIFYGRKGKLYQTYFDGMEEQLNALSLVTNAIIYWNTVYLEKIVTQMQSEGFDCSDDMIGKLSPLMFEHINFVGKYTFQYNEALENGHLRPLDEADEK
SIO_010081: AYR61_RS14465
subclass of: SO_0000673
so part of: AYR61_RS14465
location: 33185..33526
location: region:33185-33526:1
so has part: feature:33185-33526:1:exon

WP_045353380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33185-33526:1:exon

AYR61_RS15645
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS15645
so part of: sequence
location: 34067..34420
location: region:34067-34420:1
so has part: feature:34067-34420:1:exon
subclass of: SO_0000010

position:34067:1
position: 34067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34420:1
position: 34420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34067-34420:1:exon

AYR61_RS15645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS15645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002313310.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid mobilization relaxosome protein MobC
translation: MNEPQNLASTKKTTQVHRQASKQINFRVSEPDYLKLARSAQTLNLSVPAFVKKKAQGARLVAPKIAAQDAQNITHQLAKIGGNLNQLAHHANQGGQIDPQALKDLQNEVQRVWQQLT
SIO_010081: AYR61_RS15645
subclass of: SO_0000673
so part of: AYR61_RS15645
location: 34067..34420
location: region:34067-34420:1
so has part: feature:34067-34420:1:exon

WP_020923869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34067-34420:1:exon

AYR61_RS15650
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS15650
pseudo: true
so part of: sequence
location: 34402..>35079
location: region:34402-35079:1
so has part: feature:34402-35079:1:exon
subclass of: SO_0000010

position:34402:1
position: 34402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35079:1
position: 35079
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34402-35079:1:exon

AYR61_RS15650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS15650
inference: COORDINATES: protein motif:HMM:NF015397.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
SIO_010081: AYR61_RS15650
subclass of: SO_0000673
so part of: AYR61_RS15650
location: 34402..>35079
location: region:34402-35079:1
so has part: feature:34402-35079:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34402-35079:1:exon

AYR61_RS15655
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS15655
so part of: sequence
location: 35129..35707
location: region:35129-35707:1
so has part: feature:35129-35707:1:exon
subclass of: SO_0000010

position:35129:1
position: 35129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35707:1
position: 35707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35129-35707:1:exon

AYR61_RS15655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS15655
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015639714.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Mobilization protein MobB
translation: MSWQADKPKQEPTSNQNEPLTQQLTQLNQTIAELRNYQGTQIQLQATAKTSLDQQLHQIEQTAQQVNQQFQTTLNNLDSSNASSQAQLKQTLQSAYAAFQKQTNLISQENLTALKQIQTEQAKNNQRLSQLSDQVNQTIQETMAQVADQMDQQLQTTKKRFSWYEIKNYLLAVIPTGILTGLIFWLLTKYFG
SIO_010081: AYR61_RS15655
subclass of: SO_0000673
so part of: AYR61_RS15655
location: 35129..35707
location: region:35129-35707:1
so has part: feature:35129-35707:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35129-35707:1:exon

AYR61_RS14480
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14480
old locus tag: AYR61_14540
so part of: sequence
location: 36504..37433
location: region:36504-37433:1
so has part: feature:36504-37433:1:exon
subclass of: SO_0000010

position:36504:1
position: 36504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37433:1
position: 37433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36504-37433:1:exon

AYR61_RS14480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14480
old locus tag: AYR61_14540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016526818.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MSNELVKYDPELNTIPLRKFTPVEMNLFFSIISRMRDKGDQTVRFTFDQLKELSAYKPTANNRFEDDIQRTYEKMMGLHFGRRSKSGLNREFFVMFTEFEIKGEAEIPYVDIRVYPKALHLLNDLESWVRYALAEFRDLKSSYAKTMFRLLKQFRTTGYAYFSKADFDELLDIPKTYRQGDINKKVIKPIKEELTPLFRGLTVRKKYGKGRGKPVIGYSFTWKPEKKDANDFSQGQFQSERQKLFNIQHNGELTEQEKWRAIDKVKGLTLGSTEKQALAVKQAEHDKKIRDQARQEALAELRKEFGNHA
SIO_010081: AYR61_RS14480
subclass of: SO_0000673
so part of: AYR61_RS14480
location: 36504..37433
location: region:36504-37433:1
so has part: feature:36504-37433:1:exon

WP_065904080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36504-37433:1:exon

AYR61_RS14485
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14485
old locus tag: AYR61_14545
so part of: sequence
location: 37426..37983
location: region:37426-37983:1
so has part: feature:37426-37983:1:exon
subclass of: SO_0000010

position:37426:1
position: 37426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37983:1
position: 37983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37426-37983:1:exon

AYR61_RS14485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14485
old locus tag: AYR61_14545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020090467.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HTH domain-containing protein
translation: MPKTIRELADELGVSKQAIWQKIKRDASIDLRQFTSTKGNTVYVDVDGQKAIKAMFSNNLSTRYRQQKDDVDDNKKDAVDGQDEVKFLRNLVSEIQSEKKELHKLLDQQQRLALQDKQLLEEYKAENDRLKVLKMPSQETEFKHLDNQYKDEVNALKEKLENLQEQIKVQKRIEEQEKPRKWWGL
SIO_010081: AYR61_RS14485
subclass of: SO_0000673
so part of: AYR61_RS14485
location: 37426..37983
location: region:37426-37983:1
so has part: feature:37426-37983:1:exon

WP_065904083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37426-37983:1:exon

AYR61_RS15660
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS15660
pseudo: true
so part of: sequence
location: <38007..>38595
location: region:38007-38595:1
so has part: feature:38007-38595:1:exon
subclass of: SO_0000010

position:38007:1
position: 38007
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:38595:1
position: 38595
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38007-38595:1:exon

AYR61_RS15660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS15660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002403444.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: restriction endonuclease subunit S
SIO_010081: AYR61_RS15660
subclass of: SO_0000673
so part of: AYR61_RS15660
location: <38007..>38595
location: region:38007-38595:1
so has part: feature:38007-38595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:38007-38595:1:exon

AYR61_RS15665
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS15665
so part of: sequence
location: 38590..39216
location: region:38590-39216:1
so has part: feature:38590-39216:1:exon
subclass of: SO_0000010

position:38590:1
position: 38590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39216:1
position: 39216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38590-39216:1:exon

AYR61_RS15665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS15665
EC number: 3.1.21.-
inference: COORDINATES: protein motif:HMM:NF013579.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: restriction endonuclease subunit S
translation: MFPKNGAKVPELRFAGFADAWEERKLGEVATLSSSKRIHLSDYVTEGIPFYRGSEISTGGITGNQELFISQEKFDEIKEKYGVPSEGDILVTAVGTLGNLWKVDSRRFYYKDGNLIQISKMQVNSDYLLTYFTGGIGKKRLLDSAAGSNQKALTMVKMREITVDFPSEDEQKKIGAFFKSLDDTIALHQRKLDLLKEQKKGFLQKMFV
SIO_010081: AYR61_RS15665
subclass of: SO_0000673
so part of: AYR61_RS15665
location: 38590..39216
location: region:38590-39216:1
so has part: feature:38590-39216:1:exon

WP_225356553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38590-39216:1:exon

AYR61_RS14495
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14495
old locus tag: AYR61_14555
so part of: sequence
location: complement(39327..39671)
location: region:39327-39671:-1
so has part: feature:39327-39671:-1:exon
subclass of: SO_0000010

position:39327:-1
position: 39327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39671:-1
position: 39671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39327-39671:-1:exon

AYR61_RS14495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14495
old locus tag: AYR61_14555
EC number: 3.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011241744.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system PemK/MazF family toxin
translation: MVSQGDIFYVNFNPSRGHEQMNKRPAIALSNDLVCQTSNMTIVAPISSTKRNFPMYHRLTSSQTVYGKVLLDQTIALDLRARHVTDETIVDHVSREELEEIITLYKLLFSIDDK
SIO_010081: AYR61_RS14495
subclass of: SO_0000673
so part of: AYR61_RS14495
location: complement(39327..39671)
location: region:39327-39671:-1
so has part: feature:39327-39671:-1:exon

WP_001748110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39327-39671:-1:exon

AYR61_RS14500
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14500
old locus tag: AYR61_14560
so part of: sequence
location: complement(39665..39928)
location: region:39665-39928:-1
so has part: feature:39665-39928:-1:exon
subclass of: SO_0000010

position:39665:-1
position: 39665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39928:-1
position: 39928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39665-39928:-1:exon

AYR61_RS14500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14500
old locus tag: AYR61_14560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003715897.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MELIKEQTRLAKWGNSKAARIPSQIIKQLKLDDNQDMTITIENGSIVLTPIKKNPTNIHELFKDWQDDGKRDHELDWGKSEGNELQW
SIO_010081: AYR61_RS14500
subclass of: SO_0000673
so part of: AYR61_RS14500
location: complement(39665..39928)
location: region:39665-39928:-1
so has part: feature:39665-39928:-1:exon

WP_001748109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39665-39928:-1:exon

AYR61_RS14505
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14505
old locus tag: AYR61_14565
so part of: sequence
location: 40014..40601
location: region:40014-40601:1
so has part: feature:40014-40601:1:exon
subclass of: SO_0000010

position:40014:1
position: 40014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40601:1
position: 40601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40014-40601:1:exon

AYR61_RS14505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14505
old locus tag: AYR61_14565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005917937.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MQQVVLPIKDSNVLKEVQDTLLNNFKAGRRNYTIFQVGKATLLRVSDVMYLKQTDIFNLDGSIKQNAFIHDRKTGKPNTLYLKPVQTELLLYRQWLLDHKLASEWLFPSIQHPERHITEKQFYKIMSKVGDLLGINYLGTHTMRKTGAYRVYTQSNYNIGLVMNLLNHSSESMTLAYLGLDQASTETMLDKIDFG
SIO_010081: AYR61_RS14505
subclass of: SO_0000673
so part of: AYR61_RS14505
location: 40014..40601
location: region:40014-40601:1
so has part: feature:40014-40601:1:exon

WP_065904085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40014-40601:1:exon

AYR61_RS14510
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14510
old locus tag: AYR61_14570
so part of: sequence
location: 40614..40979
location: region:40614-40979:1
so has part: feature:40614-40979:1:exon
subclass of: SO_0000010

position:40614:1
position: 40614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40979:1
position: 40979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40614-40979:1:exon

AYR61_RS14510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14510
old locus tag: AYR61_14570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015083018.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDLDFKSNKYDLFDDWHQNKTKQAFTQKLQQQAQIEKTQLPQLLSREDLKIRWQMNSRQSVHQVASKPDFPQPVFAFNHGKTPLYLATGIQIFEINHLWVITPSARLAYSHWILRNVIDQS
SIO_010081: AYR61_RS14510
subclass of: SO_0000673
so part of: AYR61_RS14510
location: 40614..40979
location: region:40614-40979:1
so has part: feature:40614-40979:1:exon

WP_065904087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40614-40979:1:exon

AYR61_RS14515
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14515
old locus tag: AYR61_14575
pseudo: true
so part of: sequence
location: complement(41325..41781)
location: region:41325-41781:-1
so has part: feature:41325-41781:-1:exon
subclass of: SO_0000010

position:41325:-1
position: 41325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41781:-1
position: 41781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41325-41781:-1:exon

AYR61_RS14515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14515
old locus tag: AYR61_14575
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002833133.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: phage terminase small subunit P27 family
SIO_010081: AYR61_RS14515
subclass of: SO_0000673
so part of: AYR61_RS14515
location: complement(41325..41781)
location: region:41325-41781:-1
so has part: feature:41325-41781:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41325-41781:-1:exon

AYR61_RS14520
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14520
old locus tag: AYR61_14580
so part of: sequence
location: complement(41974..42495)
location: region:41974-42495:-1
so has part: feature:41974-42495:-1:exon
subclass of: SO_0000010

position:41974:-1
position: 41974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42495:-1
position: 42495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41974-42495:-1:exon

AYR61_RS14520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14520
old locus tag: AYR61_14580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002833134.1
GO function: GO:0004519 - endonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HNH endonuclease
translation: MPRVRRCRQPGCHAMVNFPDHYCQQHYEHEAEYLSSRERWARSHDKHYTHKYNTVTRNRDDTKRQQYNFYRTRQWAHLRQQVLDRDHYLCQYCKIIGKLTPNSKTVDHIVPVEAQPNSKADINNLVVTCRQCHHKKTIWEQTYYGTGNGNELTNADPIENIGEIVKLMNDRHL
SIO_010081: AYR61_RS14520
subclass of: SO_0000673
so part of: AYR61_RS14520
location: complement(41974..42495)
location: region:41974-42495:-1
so has part: feature:41974-42495:-1:exon

WP_065904088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41974-42495:-1:exon

AYR61_RS15245
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS15245
so part of: sequence
location: complement(42848..42905)
location: region:42848-42905:-1
so has part: feature:42848-42905:-1:exon
subclass of: SO_0000663

position:42848:-1
position: 42848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42905:-1
position: 42905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42848-42905:-1:exon

AYR61_RS15245
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 240427
locus tag: AYR61_RS15245
product: tRNA-OTHER
inference: COORDINATES: profile:tRNAscan-SE:2.0.9
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
SIO_010081: AYR61_RS15245
subclass of: SO_0000673
so part of: AYR61_RS15245
location: complement(42848..42905)
location: region:42848-42905:-1
so has part: feature:42848-42905:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42848-42905:-1:exon

AYR61_RS14530
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14530
old locus tag: AYR61_14590
so part of: sequence
location: complement(42976..43404)
location: region:42976-43404:-1
so has part: feature:42976-43404:-1:exon
subclass of: SO_0000010

position:42976:-1
position: 42976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43404:-1
position: 43404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42976-43404:-1:exon

AYR61_RS14530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14530
old locus tag: AYR61_14590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003638317.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator
translation: MKRSTIRTVEDILRDYPNIDKYIEQREQELRYPMKPADENVGGGRAQNGFNDSEDRLIITLDEDKRINALKKQRQVIDDCLDEVGEDTEIIIDELYFRKRPRYTIDGLITNGLIHVSHTKAFGLRNKFVKECAKGLGLYNLD
SIO_010081: AYR61_RS14530
subclass of: SO_0000673
so part of: AYR61_RS14530
location: complement(42976..43404)
location: region:42976-43404:-1
so has part: feature:42976-43404:-1:exon

WP_065904091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42976-43404:-1:exon

AYR61_RS14535
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14535
old locus tag: AYR61_14595
so part of: sequence
location: complement(43448..43639)
location: region:43448-43639:-1
so has part: feature:43448-43639:-1:exon
subclass of: SO_0000010

position:43448:-1
position: 43448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43639:-1
position: 43639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43448-43639:-1:exon

AYR61_RS14535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14535
old locus tag: AYR61_14595
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTHEQIEYRKYIMQGMASYGGDVAQALVWCGNHFIKLSDSQRNAINKLSAKERNQVIHELTMG
SIO_010081: AYR61_RS14535
subclass of: SO_0000673
so part of: AYR61_RS14535
location: complement(43448..43639)
location: region:43448-43639:-1
so has part: feature:43448-43639:-1:exon

WP_065904095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43448-43639:-1:exon

AYR61_RS14540
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14540
old locus tag: AYR61_14600
so part of: sequence
location: complement(43620..44060)
location: region:43620-44060:-1
so has part: feature:43620-44060:-1:exon
subclass of: SO_0000010

position:43620:-1
position: 43620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44060:-1
position: 44060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43620-44060:-1:exon

AYR61_RS14540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14540
old locus tag: AYR61_14600
inference: COORDINATES: protein motif:HMM:TIGR01671.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YopX family protein
translation: MMVPKFRVWDKEHKRMLNIDTLALSFSPKGVLTSIYTYGPDFSNDPDILGDDEPDLDSVILEQFTGLKDVNGKDIYECDIIKSNYKYAQPKVSQIIIEGGNSYILGEDLATGNEMLVSDHIGEIKVIGNVHTNPELLETQHDTRTD
SIO_010081: AYR61_RS14540
subclass of: SO_0000673
so part of: AYR61_RS14540
location: complement(43620..44060)
location: region:43620-44060:-1
so has part: feature:43620-44060:-1:exon

WP_065904097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43620-44060:-1:exon

AYR61_RS14545
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14545
old locus tag: AYR61_14605
so part of: sequence
location: complement(44060..44254)
location: region:44060-44254:-1
so has part: feature:44060-44254:-1:exon
subclass of: SO_0000010

position:44254:-1
position: 44254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44060-44254:-1:exon

AYR61_RS14545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14545
old locus tag: AYR61_14605
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIISITNLRDSNVYYLSNFSSECFSFSKDANDAAYFGQQDGKFIGRKVAKILNGVVKVKDVEG
SIO_010081: AYR61_RS14545
subclass of: SO_0000673
so part of: AYR61_RS14545
location: complement(44060..44254)
location: region:44060-44254:-1
so has part: feature:44060-44254:-1:exon

WP_065904100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44060-44254:-1:exon

AYR61_RS14550
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14550
old locus tag: AYR61_14610
so part of: sequence
location: complement(44251..44613)
location: region:44251-44613:-1
so has part: feature:44251-44613:-1:exon
subclass of: SO_0000010

position:44251:-1
position: 44251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44613:-1
position: 44613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44251-44613:-1:exon

AYR61_RS14550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14550
old locus tag: AYR61_14610
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLDYDALNKLEKQYGNIKLVPEDNPLLHKLRKSAIGNEDDPQVRYPKTSATISHNDVVEIQYYWDHGIHNSQKIGRLMGHDHIWVTKRLAVMGLLSTIKHKRLSNAEQRRHYRNGSENHK
SIO_010081: AYR61_RS14550
subclass of: SO_0000673
so part of: AYR61_RS14550
location: complement(44251..44613)
location: region:44251-44613:-1
so has part: feature:44251-44613:-1:exon

WP_065904102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44251-44613:-1:exon

AYR61_RS15250
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS15250
so part of: sequence
location: complement(44606..44821)
location: region:44606-44821:-1
so has part: feature:44606-44821:-1:exon
subclass of: SO_0000010

position:44606:-1
position: 44606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44821:-1
position: 44821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44606-44821:-1:exon

AYR61_RS15250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS15250
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKDETMTIREYRQVRGLTRQWHLHPFNIRHAPTGGYLFEDKKRQVISHYWTDPAAGKLDLIAQQRKGDNNA
SIO_010081: AYR61_RS15250
subclass of: SO_0000673
so part of: AYR61_RS15250
location: complement(44606..44821)
location: region:44606-44821:-1
so has part: feature:44606-44821:-1:exon

WP_191982309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44606-44821:-1:exon

AYR61_RS14555
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
gene: tnpA
locus tag: AYR61_RS14555
old locus tag: AYR61_14615
so part of: sequence
location: complement(44883..45329)
location: region:44883-45329:-1
so has part: feature:44883-45329:-1:exon
subclass of: SO_0000010

position:44883:-1
position: 44883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45329:-1
position: 45329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44883-45329:-1:exon

AYR61_RS14555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
gene: tnpA
locus tag: AYR61_RS14555
old locus tag: AYR61_14615
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003607724.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS200/IS605 family transposase
translation: MSKENAKHERGYVYNFHFHLVWVTKYRKQIFNTPRFAKEMLTILQNIANQNEIEIEKGEVMLDHIHLLISFKPKYAPANIVKVLKGVSAREWFKIHPETRQIVWGGHLWSPSYYMGTLGDMSKETVEHYIENQRTERGKAGRPLLKRN
SIO_010081: AYR61_RS14555
subclass of: SO_0000673
so part of: AYR61_RS14555
location: complement(44883..45329)
location: region:44883-45329:-1
so has part: feature:44883-45329:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:44883-45329:-1:exon

AYR61_RS14560
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14560
old locus tag: AYR61_14620
so part of: sequence
location: 45434..46666
location: region:45434-46666:1
so has part: feature:45434-46666:1:exon
subclass of: SO_0000010

position:45434:1
position: 45434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46666:1
position: 46666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45434-46666:1:exon

AYR61_RS14560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14560
old locus tag: AYR61_14620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020089731.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA-guided endonuclease TnpB family protein
translation: MSEFKYHYGIKMRIFPSREQKHQLDNNINASRFAYNEMVAIDKELFQLRKVKCYIASVVNRIAYLQKRKNNTQMLFALHPWLSGTNVGTDVVDQARRAYQSAWRLFRQVHRSGTPKFHKKQMSGSFQLPNRYAKVQPNLFNGSCRFLDSKHVKISLIGRLRVSGSHRRLFSCGNDVRIGTITVSRDATGRYYLSMQLGSDTPFVVGGKQQISPVGIDLNTDNFLTDSNGNIVANPRYYRSIKGKLAKAQRKLSRRALRAKKENRPLREAKNYQKQRVLVATLQRKVANQRNNFLHLVSTTLIKNHDLVVAEELRSKNMLRNHALAMSIADVGWRTFLGMLAYKADLYGHKFVTVNPRNTTQTCSECGYLMCGDKKLTLKDREWTCPQCGNHHIRDWNAAKNILKKGLASA
SIO_010081: AYR61_RS14560
subclass of: SO_0000673
so part of: AYR61_RS14560
location: 45434..46666
location: region:45434-46666:1
so has part: feature:45434-46666:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:45434-46666:1:exon

AYR61_RS14565
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14565
old locus tag: AYR61_14625
so part of: sequence
location: complement(46823..47530)
location: region:46823-47530:-1
so has part: feature:46823-47530:-1:exon
subclass of: SO_0000010

position:46823:-1
position: 46823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47530:-1
position: 47530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46823-47530:-1:exon

AYR61_RS14565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14565
old locus tag: AYR61_14625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004165760.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative HNHc nuclease
translation: MQRSRTQCIEQDGKQYLVTELDEAPNFEHIETVSGSTSEFYMDWELADTRKVRPAQRRLFFALLNDIMEWSITPKDFLKELFYMQYSIYTDGKEISLADDSTNSVSDGNILLDLVIDFMFTWRVPFKKGYELLPRNEAYYMFECCRHRVCCVCGAEHADIHHVDVIGSGVNRNHVDHTKRHVMCLCREHHTEIETIGPTAFAYKHHVTTAGIKLDAETLKRIGVQGNYSNNQRGS
SIO_010081: AYR61_RS14565
subclass of: SO_0000673
so part of: AYR61_RS14565
location: complement(46823..47530)
location: region:46823-47530:-1
so has part: feature:46823-47530:-1:exon

WP_065904124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46823-47530:-1:exon

AYR61_RS14570
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14570
old locus tag: AYR61_14630
so part of: sequence
location: complement(47530..48390)
location: region:47530-48390:-1
so has part: feature:47530-48390:-1:exon
subclass of: SO_0000010

position:48390:-1
position: 48390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47530-48390:-1:exon

AYR61_RS14570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14570
old locus tag: AYR61_14630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015076549.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DnaD domain protein
translation: MNYIQQLRAFDDFKLYDTKLSVGQNALWYALMSINNKSNWKTWFTVANSTLENLSGLSRSGIAKDRNILRQLGLIDFKSNGRKATSYRVCVLYTSNSAQDSVQDSTQGSVQDSTQGSVQGSVQDSSTLIKLNKTETKQEDDDGRARVLDLWQNLWGFPNAIARQDLDEWMTSLSPDLVQYAIEVAGHHDVQARAADKYVGKVVQGWLDLKITTLKAAQQANTEHEQRLSNARGSRPRGQITETLPAWADGTKTTPKSQPSVTDEQQAAVIARLEKIKHEKQQEGSV
SIO_010081: AYR61_RS14570
subclass of: SO_0000673
so part of: AYR61_RS14570
location: complement(47530..48390)
location: region:47530-48390:-1
so has part: feature:47530-48390:-1:exon

WP_065904107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47530-48390:-1:exon

AYR61_RS14575
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
locus tag: AYR61_RS14575
old locus tag: AYR61_14635
so part of: sequence
location: complement(48402..49241)
location: region:48402-49241:-1
so has part: feature:48402-49241:-1:exon
subclass of: SO_0000010

position:48402:-1
position: 48402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49241:-1
position: 49241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48402-49241:-1:exon

AYR61_RS14575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
locus tag: AYR61_RS14575
old locus tag: AYR61_14635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016381988.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PD-(D/E)XK nuclease-like domain-containing protein
translation: MTTSISPTKNNKVSSKPLTKSNYYDRWTDDIYLSPTVYKRYQACEAEALAEQAGQWAQMDATALLVGNYLHSYFESPAAHEAFIEEHKDELKSSRKPYKLLKPYQQAEMMIKTLDEDETFQQFYQGDKEVIVTGKIEGVPWKGKIDCLNLDNNYFIDLKTTRDLHMKYWDTDEHKYVPFVTKYNYQLQMAVYRELIKQTFGIDCTPYIVGVTKQDPPDKAVLSIPDEQLGWALDDVKAGQQHILDVMHGNVEPTRCEQCDYCRSTKTLGDITSIEDLIS
SIO_010081: AYR61_RS14575
subclass of: SO_0000673
so part of: AYR61_RS14575
location: complement(48402..49241)
location: region:48402-49241:-1
so has part: feature:48402-49241:-1:exon

WP_065904110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48402-49241:-1:exon

AYR61_RS14580
type: Gene
subclass of: SO_0000704
RO_0002162: 240427
gene: bet
locus tag: AYR61_RS14580
old locus tag: AYR61_14640
so part of: sequence
location: complement(49177..50010)
location: region:49177-50010:-1
so has part: feature:49177-50010:-1:exon
subclass of: SO_0000010

position:49177:-1
position: 49177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50010:-1
position: 50010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49177-50010:-1:exon

AYR61_RS14580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 240427
gene: bet
locus tag: AYR61_RS14580
old locus tag: AYR61_14640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008360781.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006259 - DNA metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage recombination protein Bet
translation: MSEGILSTPIIYKANGEEVKLSGQMVKQYLVRGNGNVTDQEIVMFMNLAKYQHLNPFLNEAYLVKFGNSPASIITSKEAFMKRANSNPHYKGIKAGIMVARGDEIVQLNGAVKLPKDVLIGGWATVKRDDREDTHIEIAFNEFSKAQATWKSMPSNMIRKSAMVNALREAFPETLGDMYTEDDKNLNDHMNARQTVQATESTPSNVKDIISKAVSETVKKTQKAKSVDDKPTAETQAKPDSAKEPEPDIVNKGGDPHDDQYLSDEEQQSIFEAINEK
SIO_010081: AYR61_RS14580
subclass of: SO_0000673
so part of: AYR61_RS14580
location: complement(49177..50010)
location: region:49177-50010:-1
so has part: feature:49177-50010:-1:exon

WP_065904113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49177-50010:-1:exon