Ustilago maydis 521 chromosome 10, whole genome shotgun sequence.
Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago.
Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis
Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (02-SEP-2014) Institute of Bioinformatics and Systems Biology, Helmholtz Zentrum Muenchen, German Research Center for Environmental Health (GmbH), Ingolstaedter Landstrasse 1, Neuherberg, Bavaria 85764, Germany
Submitted (23-JUL-2003) Whitehead Institute/MIT Center for Genome Research, 320 Charles Street, Cambridge, MA 02142, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM003149.\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 2014\nAssembly Method :: Arachne v. May-2005\nAssembly Name :: Umaydis521_2.0\nGenome Coverage :: 10.0x\nSequencing Technology :: Sanger\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##
related to beta-1,3-glucan binding protein
related to MMM1 - required for mitochondrial shape and structure
related to TRZ1 - tRNase Z, involved in RNA processing
related to VTC1 subunit of the vacuolar transporter chaperone complex
putative aldehyde dehydrogenase family 7 member A1
related to MGS1 - Maintenance of Genome Stability 1
putative NADH dehydrogenase (ubiquinone)
putative transcription initiation factor iia gamma chain
related to SPS19 peroxisomal 2,4-dienoyl-CoA reductase
related to RAD54 - DNA-dependent ATPase of the Snf2p family
UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase
related to ALG7 - UDP-N-acetylglucosamine-1-phosphate transferase
related to TFA1 - TFIIE subunit (transcription initiation factor), 66 kD
related to YVC1 - vacuolar cation channel
putative E2 ubiquitin-conjugating protein
related to Neural Wiskott-Aldrich syndrome protein
related to TAD2 - subunit of tRNA-specific adenosine-34 deaminase
related to SIZ1 - E3-like factor in the SUMO pathway
phosphopantothenate--cysteine ligase CAB2
related to CAB2 - probable phosphopantothenoylcysteine synthetase
putative amino acid transmembrane transporter
related to YJU2 - essential protein required for pre-mRNA splicing
related to Mannosyl-oligosaccharide 1,2-alpha-mannosidase IC
related to OAC1 - similarity to mitochondrial uncoupling proteins (MCF)
related to KIC1 - ser/thr protein kinase that interacts with Cdc31p
related to conserved oligomeric Golgi complex component 2
putative CPR1 - cyclophilin (peptidylprolyl isomerase) (isoform B)
putative CPR1 - cyclophilin (peptidylprolyl isomerase) (isoform A)
related to HOS4 - subunit of the Set3 complex
related to BNA2 - putative tryptophan 2,3-dioxygenase or indoleamine 2,3-dioxygenase
related to para-aminobenzoic acid synthetase
putative cell division control protein CDC3
related to long-chain-fatty-acid-CoA ligase
related to PDS5 - precocious dissociation of sister chromatids
related to COX19 - Cytochrome c oxidase assembly protein
related to Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase PTEN
related to GLE2 - required for nuclear pore complex structure and function
putative thioredoxin-disulfide reductase TRR2
putative ATP-dependent RNA helicase DBP5
tRNA 1-methyladenosine methyltransferase subunit GCD10
related to GCD10 - translation initiation factor eIF3 RNA-binding subunit
putative nuclear zinc-finger motif containing protein
related to PIN4 - protein involved in G2/M phase progression and response to DNA damage
related to tetrahydrofolylpolyglutamate synthase (met6+)
putative positive effector protein GCN20
related to MCR1 - cytochrome-b5 reductase
mRNA-binding ubiquitin-specific protease UBP3
related to Ubiquitin carboxyl-terminal hydrolase 10
related to SPN1 - Spt6-interacting putative elongation factor
related to HFI1 - adaptor protein required for structural integrity of the SAGA complex
related to dis1-suppressing protein kinase dsk1
TATA-binding protein-associated factor TAF6
related to TAF6 - Subunit (60 kDa) of TFIID and SAGA complexes
related to AVL9 - protein involved in exocytic transport from the Golgi
1-phosphatidylinositol-4-phosphate 5-kinase
related to phosphatidylinositol-4-phosphate 5-kinase
related to YPT7 - GTP-binding protein of the RAB family
putative protein with a possible role in tRNA export
related to PRP12 - involved in early maturation of pre-rRNA
related to PEP5 - vacuolar biogenesis protein
putative pyridoxine biosynthesis protein SNZ1
putative ubiquinol-cytochrome-c reductase Rieske iron-sulfur protein
rRNA-binding ribosome biosynthesis protein UTP23
related to UTP23 - essential nucleolar protein that is a component of the SSU processome
related to BNA2 - tryptophan 2,3-dioxygenase
putative DNA-directed RNA polymerases I, II and III subunit protein
putative guanine nucleotide exchange factor
biotin--[acetyl-CoA-carboxylase] ligase BPL1
related to BPL1 - biotin holocarboxylase synthetase
related to RCL1 - RNA terminal phosphate cyclase-like protein
bifunctional endoribonuclease/protein kinase IRE1
related to SYF1 - member of the NineTeen Complex involved in splicing
related to SSF1 - Nucleolar protein involved in the assembly of the large ribosomal subunit
related to succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial precursor
related to PRI2 - DNA-directed DNA polymerase alpha, 58 KD subunit (DNA primase)
related to NUP170 - nuclear pore protein
putative pyruvate dehydrogenase (acetyl-transferring) subunit E1 alpha
related to swi/snf-related matrix-associated actin-dependent regulator of chromatin, subfamily c, member 1
putative glutamine amidotransferase/cyclase
related to VPS27 - vacuolar protein sorting-associated protein
putative DNA-directed RNA polymerase II core subunit RPO21
related to GTPase-activating protein beta-chimerin
snoRNA-binding rRNA-processing protein UTP6
related to ATP11 - F1F0-ATPase complex assembly protein