Ustilago maydis 521 chromosome 8, whole genome shotgun sequence.
Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago.
Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis
Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (02-SEP-2014) Institute of Bioinformatics and Systems Biology, Helmholtz Zentrum Muenchen, German Research Center for Environmental Health (GmbH), Ingolstaedter Landstrasse 1, Neuherberg, Bavaria 85764, Germany
Submitted (23-JUL-2003) Whitehead Institute/MIT Center for Genome Research, 320 Charles Street, Cambridge, MA 02142, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM003147.\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 2014\nAssembly Method :: Arachne v. May-2005\nAssembly Name :: Umaydis521_2.0\nGenome Coverage :: 10.0x\nSequencing Technology :: Sanger\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##
related to Ribonuclease P protein subunit p30
related to retinal short-chain dehydrogenase/reductase
related to CCR4 - component of the major cytoplasmic deadenylase (C-terminal fragment)
cyclin-dependent serine/threonine protein kinase SSN3
related to SSN3 - cyclin-dependent CTD kinase
related to SMC4 - Stable Maintenance of Chromosomes
related to EXO1 - exonuclease which interacts with Msh2p
putative small nuclear ribonucleoprotein SNRPD1
putative clathrin-associated adaptor complex medium chain
exosome non-catalytic core subunit RRP46
related to RRP46 - Exosome non-catalytic core component
related to TIM54 (component of the mitochondrial TIM22 translocase)
related to Adapter-related protein complex 3 delta 1 subunit
related to ATP-binding cassette protein (ABC) transporter
related to molybdenum cofactor sulfurase
related to HUT1 - involved in UDP-galactose transport to the Golgi lumen
related to ATP-binding cassette (ABC) transporter
mitochondrial 54S ribosomal protein MRPL51
related to MRPL51 - mitochondrial ribosomal protein, large subunit
protein involved in surface sensing via MAP-kinase cascade
related to KIP1 - kinesin-related protein
negative cofactor 2 transcription regulator complex subunit NCB2
related to TATA-binding protein-associated phosphoprotein Dr1 protein
putative 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase isoenzyme
putative lipoprotein-associated phospholipase A2
related to peroxisomal membrane protein pex13
related to endothelial zinc finger protein induced by tumor necrosis factor alpha
alternatively spliced; hypothetical protein (isoform B)
putative ornithine-oxo-acid transaminase
related to DRS1 - RNA helicase of the DEAD box family
translation initiation factor eIF2B subunit alpha
related to GCN3 - translation initiation factor eIF2B, 34 KD, alpha subunit
related to SKT5 - protoplast regeneration and killer toxin resistance protein
related to ATP10 - F1F0 ATPase complex assembly protein
related to peroxisomal membrane protein 20
cleavage polyadenylation factor subunit FIP1
putative delta(24)-sterol c-methyltransferase (erg6)
related to RAD1 - component of the nucleotide excision repairosome
related to triose phosphate/3-phosphoglycerate/phosphate translocator
related to CHL1 - protein of the DEAH box family
related to lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial precursor
putative glutamine--fructose-6-phosphate transaminase (isomerizing) GFA1
related to TFG1 - TFIIF subunit (transcription initiation factor)
related to glomerulosclerosis protein Mpv17
related to SNU71 - component of U1 snRNP required for mRNA splicing via spliceosome
putative cyclin-dependent kinases regulatory subunit
related to LSM8 - Component of small nuclear ribonucleoprotein complexes involved in RNA processing and splicing
related to dihydroorotate dehydrogenase, mitochondrial precursor
putative 1-phosphatidylinositol 3-kinase
related to Secretory carrier-associated membrane protein 2
related to RSC1 - component of the RSC chromatin remodeling complex
related to CTR2 - Protein involved in copper transport
related to component of the anaphase promoting complex
putative exosome complex exonuclease rrp41
related to DNF2 - Non-essential P-type ATPase
related to Aldo-keto reductase yakc [NADP+]
related to CDC5 - Serine/threonine-protein kinase
putative acetolactate synthase catalytic subunit
related to RUD3 - suppressor of uso1-1 transport defect
putative required for 40S ribosome biogenesis
related to trehalose-6-phosphate phosphatase
related to DCD1 - deoxycytidylate deaminase
putative 26S proteasome non-ATPase regulatory subunit p58
related to STE23 - Metalloprotease involved in a-factor processing
putative nucleotide excision repair protein
related to SPB4 - ATP-dependent RNA helicase of DEAH box family
related to NAF1 - nuclear assembly factor
related to Tip elongation aberrant protein 1
related to 3-hydroxyacyl-CoA dehydrogenase
related to SRP40 - serine-rich protein with a role in pre-ribosome assembly or transport
related to Ribonucleases P/MRP protein subunit POP1
putative protein involved in protein-vacuolar targeting
snoRNA-binding rRNA-processing protein ENP1
related to ENP1 - required for pre-rRNA processing and 40S ribosomal subunit synthesis
putative general transcription repressor
related to MYO1 - myosin-1 isoform (type II myosin) heavy chain
related to dna polymerase epsilon p17 subunit
putative triose-phosphate isomerase TPI1
related to SAP155 - SIT4-associating protein
related to histone acetyltransferase 3 (myst)
related to gamma-tubulin complex component 5
mitogen-activated serine/threonine-protein kinase
putative ribose-phosphate pyrophosphokinase 3
related to 5-formyltetrahydrofolate cyclo-ligase
related to DOA1 - involved in ubiquitin-dependent proteolysis
related to ATO3 - plasma membrane protein with possible role in export of ammonia
protein mediates microtubule-dependent mRNA transport
serine/threonine protein kinase B-related Ukb1
related to PRM1 - Pheromone-regulated multispanning membrane protein
related to APA2 - ATP adenylyltransferase II
putative pyruvate transmembrane transporter
putative trifunctional formate-tetrahydrofolate ligase/methenyltetrahydrofolate cyclohydrolase/methylenetetrahydrofolate dehydrogenase MIS1
related to TFB5 - component of general transcription and DNA repair factor TFIIH
putative DExD/H-box ATP-dependent RNA helicase DHH1
related to PAM17 - constituent of the TIM23 complex
related to MTF1 - mitochondrial RNA polymerase specificity factor
related to cell cycle control protein cwf23
related to IST1 - protein with a positive role in the multivesicular body sorting pathway
related to UNR-interacting protein STRAP (serine-threonine kinase receptor-associated protein)
related to MRPL35 - mitochondrial ribosomal protein, large subunit
putative nucleolar rRNA processing protein
related to ATG11 - required for mitophagy
related to component of the spindle assembly checkpoint dma1
related to TUL1 - Golgi-localized RING-finger ubiquitin ligase
related to Tuftelin-interacting protein 11
related to SKN7 - transcription factor (C-terminal fragment)
related to NUM1 - nuclear migration protein
putative protein promoting preinitiation complex assembly
related to ERV25 - component of the COPII-coated vesicles
related to SNF1-related protein kinase KIN10
related to MSH6 - DNA mismatch repair protein
related to ECO1 - Acetyltransferase required for establishment of sister chromatid cohesion
related to PBY1 - putative tubulin tyrosine ligase
related to SCT1 - glycerol 3-phosphate/dihydroxyacetone phosphate dual substrate acyltransferase
alternatively spliced; hypothetical protein (isoform A)
related to YSP2 - protein involved in programmed cell death
related to DASH complex subunit spc19 (Outer kinetochore protein spc19)
snoRNA-binding rRNA-processing protein UTP10
related to UTP10 - nucleolar protein, component of the small subunit processome
related to YHK8 - putative mediator of drug efflux
related to CAP59 (required for capsule formation)