Ustilago maydis 521 chromosome 6, whole genome shotgun sequence.
Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago.
Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis
Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (02-SEP-2014) Institute of Bioinformatics and Systems Biology, Helmholtz Zentrum Muenchen, German Research Center for Environmental Health (GmbH), Ingolstaedter Landstrasse 1, Neuherberg, Bavaria 85764, Germany
Submitted (23-JUL-2003) Whitehead Institute/MIT Center for Genome Research, 320 Charles Street, Cambridge, MA 02142, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM003145.\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 2014\nAssembly Method :: Arachne v. May-2005\nAssembly Name :: Umaydis521_2.0\nGenome Coverage :: 10.0x\nSequencing Technology :: Sanger\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##
related to UPF3 - Nonsense-mediated mRNA decay protein
guanine nucleotide-binding protein subunit alpha-2
dolichyl-P-Glc:Man(9)GlcNAc(2)-PP-dolichol alpha-1,3-glucosyltransferase
related to POP5 - subunit of both RNase MRP and nuclear RNase P
UDP-glucose:sterol glucosyltransferase Ugt53A1
related to PEX5 - peroxisomal targeting signal receptor
related to AIM2 - cytoplasmic protein involved in mitochondrial function or organization
related to VMA21 - ATPase assembly integral membrane protein
related to YCS4 - subunit of condensin protein complex
mitochondrial 37S ribosomal protein MRPS5
related to MRPS5 - mitochondrial ribosomal protein, small subunit
related to SEC8 - protein transport protein
related to VPS13 - involved in regulating membrane traffic (N-terminal fragment)
DNA-directed DNA polymerase alpha subunit POL12
related to DNA polymerase alpha 70 kDa subunit
putative ran-specific GTPase-activating protein
putative required for pre-18S rRNA processing
putative proteasome regulatory particle base subunit RPT2
related to Tim22, mitochondrial import inner membrane translocase subunit
related to RRP7 - essential protein involved in rRNA processing and ribosome biogenesis
histone acetyltransferase catalytic subunit HAT1
related to histone acetyltransferase subunit HAT1
putative ATP-binding cassette glutathione S-conjugate transporter
putative chaperonin containing TCP-1 complex subunit CCT4
related to UFD1 - ubiquitin fusion degradation protein
related to Sterol regulatory element binding protein cleavage-activating protein
putative phosphogluconate dehydrogenase (decarboxylating)
related to Het-c heterokaryon incompatibility protein
related to RFA2 - DNA replication factor A, 36 kDa subunit
regulator Ustilago maydis 1 protein (Rum1)
putative long-chain fatty acid transporter
related to TPO1 - Vacuolar polyamine-H+ antiporter
related to cleft lip and palate transmembrane protein 1 (CLPTM1)
related to Double-strand-break repair protein rad21
related to 2-hydroxy-3-oxopropionate reductase
H(+)-transporting V0 sector ATPase subunit e
related to vacuolar ATP synthase subunit H
related to phosphatidylinositol phosphate phosphatase
related to extracellular aspartic proteinase
related to mfs1 - putative multidrug transporter
putative mitochondrial processing peptidase alpha chain precursor
alternatively spliced; hypothetical protein (isoform A)
putative chromatin remodeling complex ATPase subunit
methylenetetrahydrofolate dehydrogenase (NAD(+))
related to MTD1 - methylenetetrahydrofolate dehydrogenase (NAD+)
putative vacuolar sorting protein (hbrA)
bifunctional hydroxyethylthiazole kinase/thiamine-phosphate diphosphorylase
related to thiamine-phosphate diphosphorylase / hydroxyethylthiazole kinase
related to FAR11 - protein involved in recovery from cell cycle arrest in response to pheromone
putative transcriptional coregulator Snw1
related to TAF2 - component of TFIID complex
putative alanine-glyoxylate transaminase
related to Alpha-1,6-mannosyltransferase
DNA-directed RNA polymerase I core subunit RPA190
related to DNA-directed RNA polymerase I
related to YRO2 - putative plasma membrane protein, transcriptionally regulated by Haa1p
related to LYS2 - L-aminoadipate-semialdehyde dehydrogenase, large subunit
related to PBP1 - Pab1p interacting protein
ERMES complex Ca(2+)-binding regulatory GTPase GEM1
related to GEM1 mitochondrial GTPase EF-hand protein
putative ubiquitin-specific processing protease 21
related to PEX10 - peroxisomal assembly protein - peroxin
putative cytochrome c oxidase subunit VIb
related to LUC7 - essential protein associated with the U1 snRNP complex
related to JJJ1 cochaperone required for a late step of ribosome biogenesis
related to SWD2 - subunit of the COMPASS complex
related to dihydroceramide delta(4)-desaturase
GDP-Man:Man(1)GlcNAc(2)-PP-dolichol alpha-1,3-mannosyltransferase
related to alpha-1,3-mannosyltransferase alg2
related to SOG2 - key component of the RAM signaling network
glycylpeptide N-tetradecanoyltransferase NMT1
related to NMT1 - N-myristoyltransferase
related to GYP7 - GTPase-activating protein for Ypt7p
putative periodic tryptophan protein PWP2
related to zinc finger protein white collar 2 (wc-2)
putative translation initiation factor eIF1
putative succinyl-CoA:3-ketoacid-coenzyme A transferase
DNA 5'-adenosine monophosphate hydrolase
related to ECM40 - acetylornithine acetyltransferase
related to VPS29 - involved in vacuolar protein sorting
putative small nuclear ribonucleoprotein E
related to MAM3 - protein required for normal mitochondrial morphology
D-arabinose 1-dehydrogenase (NAD(P)(+)) ARA2
related to ARA2 - NAD-dependent arabinose dehydrogenase
putative 26S proteasome non-atpase regulatory subunit Rpn6
related to ATM1 - Mitochondrial inner membrane ABC transporter involved in the maturation of cytosolic iron-sulfur (Fe/S) cluster-containing proteins
related to cAMP-independent regulatory protein pac2
related to Endothelin-converting enzyme 1
related to VPS55 - protein involved in late endosome to vacuole trafficking
CCR4-NOT core ubiquitin-protein ligase subunit MOT2
related to MOT2 - transcriptional repressor
putative signal recognition particle subunit protein
related to ROT1 - molecular chaperone in the endoplasmic reticulum
putative fructose 1,6-bisphosphate 1-phosphatase
related to SIN3 - transcription regulatory protein
related to PCL6 - cyclin like protein interacting with Pho85p
related to putative C2H2 transcriptional regulator
related to cystathionine beta-lyase (N-terminal fragment)
related to PIF1 - DNA helicase involved in mitochondrial DNA repair and telomere length control
putative mfs-multidrug-resistance transporter
mRNA-binding phosphate metabolism regulator
related to molybdenum cofactor biosynthetic protein
related to GPI-anchor transamidase complex subunit Gpi16
related to SMI1 - beta-1,3-glucan synthesis protein
related to SEC16 - COPII vesicle coat protein required for ER transport vesicle budding
related to YTM1 - microtubule-interacting protein
related to CBK1 - Serine/threonine protein kinase involved in cell wall biosynthesis
related to CYS4 - Cystathionine beta-synthase
related to quinic acid utilisation protein QUTG (inositol-1(or 4)-monophosphatase)
related to GSP1 - GTP-binding protein of the ras superfamily
DNA polymerase epsilon noncatalytic subunit
related to DNA polymerase epsilon subunit B
related to UNG1 - Uracil-DNA glycosylase
mitochondrial 54S ribosomal protein YmL16
related to MRPL6 - mitochondrial ribosomal protein, large subunit
related to alternative oxidase precursor, mitochondrial
putative branched-chain alpha-keto acid dehydrogenase subunit e1-beta
related to GCY1 - putative NADP(+) coupled glycerol dehydrogenase / hypothetical protein
putative H(+)-transporting V0 sector ATPase subunit d
related to branched-chain amino acid aminotransferase
related to UV-damaged DNA-binding protein
related to 26S proteasome non-ATPase regulatory subunit 9
putative ATP-binding multidrug cassette transport protein
related to phosphatidylserine decarboxylase
related to NADH-ubiquinone oxidoreductase MLRQ subunit
putative glutamate dehydrogenase (NADP(+))
iron-sulfur cluster assembly protein NAR1
related to NAR1 - similarity to human nuclear prelamin A recognition factor
related to beta-1,3-glucan binding protein
putative tricarboxylate secondary active transmembrane transporter
related to nitrogen assimilation transcription factor nit-4
related to 2,3-diaminopropionate ammonia-lyase