Ustilago maydis 521 chromosome 5, whole genome shotgun sequence.
Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago.
Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis
Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (02-SEP-2014) Institute of Bioinformatics and Systems Biology, Helmholtz Zentrum Muenchen, German Research Center for Environmental Health (GmbH), Ingolstaedter Landstrasse 1, Neuherberg, Bavaria 85764, Germany
Submitted (23-JUL-2003) Whitehead Institute/MIT Center for Genome Research, 320 Charles Street, Cambridge, MA 02142, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM003144.\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 2014\nAssembly Method :: Arachne v. May-2005\nAssembly Name :: Umaydis521_2.0\nGenome Coverage :: 10.0x\nSequencing Technology :: Sanger\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##
related to RNA (guanine-N7-) methyltransferase
putative nicotinate-nucleotide adenylyltransferase
related to cathepsin d (lysosomal aspartyl protease)
putative proteasome core particle subunit alpha 3
related to Nuclear cohesin complex subunit
cleavage polyadenylation factor subunit RNA14
related to RNA14 - component of pre-mRNA 3`-end processing factor CF I
DNA-directed RNA polymerase III subunit C31
related to RPC31 - DNA-directed RNA polymerase III
related to multidrug resistance proteins
putative H(+)-transporting V1 sector ATPase subunit F
related to PET100 chaperone that specifically facilitates the assembly of cytochrome c oxidase
related to mRNA splicing-associated serine-threonine protein kinase
related to calpain-like protease PalBory
related to PRP43 - spliceosomal RNA helicase (DEAH-box family)
endoplasmic reticulum calcium transporter
putative mitochondrial 54S ribosomal protein
related to MRF1 - peptide chain release factor, mitochondrial
related to PSD1 - phosphatidylserine decarboxylase 1
putative 3-hydroxybutyryl-CoA dehydrogenase
related to ARL3 - ADP-ribosylation factor-like protein, member of the arf-sar family in the ras superfamily
bifunctional 4-hydroxy-4-methyl-2-oxoglutarate aldolase/oxaloacetate decarboxylase
related to triacylglycerol lipase precursor
related to serine/threonine-protein kinase
related to HRQ1 - putative RecQ helicase
related to ERG6 - Delta(24)-sterol C-methyltransferase
related to RMD1 - cytoplasmic protein required for sporulation
related to PCP1 - mitochondrial serine protease
related to PLP1 - protein involved in actin and tubulin folding
related to mixed-linked glucanase precursor MLG1
related to Deoxyribodipyrimidine photolyase
related to KRE27 - member of a transmembrane complex required for efficient folding of proteins in the ER
related to Cytoplasmic acetyl-CoA hydrolase 1
related to positive effector protein GCN20
related to 2,5-diketo-D-gluconic acid reductase
related to TRM11 - Catalytic subunit of an adoMet-dependent tRNA methyltransferase complex
putative NADH-ubiquinone reductase (H(+)-translocating)
related to RKM2 - ribosomal protein lysine methyltransferase
related to methylglyoxal reductase (NADPH-dependent)
related to ACN9 - protein of gluconeogenesis in mitochondrial intermembrane space
putative NADPH-dependent beta-ketoacyl reductase (rhlG)
putative peptidylprolyl isomerase (cyclophilin)-like protein
putative 3-hydroxyisobutyrate dehydrogenase
related to VPS71 - nucleosome-binding component of the SWR1 complex
related to lincomycin-condensing protein lmbA
related to bifunctional polynucleotide phosphatase/kinase
related to dibenzothiophene desulfurizing enzyme
related to Carrier protein YMC1, mitochondrial precursor
related to glutamate carboxypeptidase II
related to MIC14 - mitochondrial intermembrane space protein, required for normal oxygen consumption
related to ubiquitin related modifier URM1
putative theta class glutathione s-transferase
related to translation initiation protein SUA5
putative vacuolar protein sorting protein VpsB
translation initiation factor eIF2B subunit gamma
related to GCD1 - gamma subunit of the translation initiation factor eIF2B
related to amino acid vacuolar transport protein AVT2
related to phosphatidic acid-preferring phospholipase A1
putative ATP-binding cassette transporter
RNA-binding ribosome biosynthesis protein MAK21
related to MAK21 - protein required for 60S ribosomal subunit biogenesis
related to CDS1 - CDP-diacylglycerol synthase
related to UBP1 - ubiquitin-specific protease
related to PET127 - component of mitochondrial translation system
related to DFM1 - ER protein involved in ER-associated protein degradation
related to anaphase promoting complex subunit 11
related to C2H2-type zinc finger protein
related to peptidyl-prolyl cis-trans isomerase
malate dehydrogenase (oxaloacetate-decarboxylating)
related to PEX14 - peroxisomal protein involved in protein import - peroxin
related to DNA-directed RNA polymerase 13.3K chain
putative O-sialo-glycoprotein-endopeptidase A1
related to ATG5 - protein involved in autophagy and the Cvt pathway
related to TAF12 - subunit of TFIID and SAGA complexes
related to NOC4 - nucleolar protein, mediates maturation and nuclear export of 40S ribosomal subunits
related to DTD1 - D-Tyr-tRNA(Tyr) deacylase activity
related to PEP12 syntaxin (T-SNARE), vacuolar
putative U3 small nucleolar ribonucleoprotein component
mRNA-binding ribosome synthesis protein NOC2
related to translation initiation factor IF-2, mitochondrial
putative chaperonin containing TCP-1 complex subunit CCT6
related to mitochondrial carrier protein
putative mitogen-activated protein kinase HOG1
putative translation initiation factor eIF2 subunit gamma
related to ATPase inhibitor, mitochondrial precursor
related to regulator of nonsense transcripts 1
related to phosphatidylserine decarboxylase proenzyme 2 precursor
putative tricarboxylate secondary active transmembrane transporter
related to signal recognition particle 9 protein (SRP9)
related to MCM10 - essential chromatin-associated protein involved in the initiation of DNA replication
related to vacuolar protein-sorting protein VPS35
related to serine/threonine protein kinase
putative karyopherin subunit beta-1 (importin 95)
putative anthranilate synthase component II
putative cytochrome c peroxidase precursor
related to Protein transport protein Sec24C
putative 3-deoxy-7-phosphoheptulonate synthase
putative mitochondrial 37S ribosomal protein RSM19
related to subunit of the Arp2/3 complex
related to alpha,alpha-trehalose-phosphate synthase, 115 KD subunit
related to tRNA splicing endonuclease beta subunit
related to CAC2 - component of the chromatin assembly complex
related to KAR4 - transcription factor required for gene regulation in response to pheromones
putative guanine nucleotide-binding protein subunit beta
related to glycine-rich RNA-binding protein; hypothetical protein (Isoform B)
related to glycine-rich RNA-binding protein; alternatively spliced; hypothetical protein (Isoform A)
related to HRP1 - subunit of cleavage factor I
related to PEX6 - peroxisomal assembly protein
Rho family guanine nucleotide exchange factor CDC24
related to CDC24 - GTP/GDP exchange factor for Cdc42p
putative 26S proteasome regulatory subunit Rpn10
putative CCR4-NOT core exoribonuclease subunit protein
putative ubiquitin-conjugating enzyme E2
related to negative regulator of mitosis
related to nuclear division protein Rft1
related to mitochondrial intermediate peptidase precursor
putative P-type ATPase, a proposed aminophospholipid translocase
putative NADH2 dehydrogenase (ubiquinone)
protein required for clamp formation and pathogenic development
related to REI1 - cytoplasmic pre-60S factor
ubiquitin-ribosomal 60S subunit protein L40 fusion protein
related to translation elongation factor eEF1, gamma chain
putative adapter-related protein complex 1 subunit beta 1
putative rRNA (adenine-N6,N6-)-dimethyltransferase
putative type 2A-related serine/threonine-protein phosphatase SIT4
putative DNA-directed RNA polymerase III core subunit RET1
related to EMC1 - member of a transmembrane complex required for efficient folding of proteins in the ER
putative translation elongation factor eIF-5A
related to OXA1 - cytochrome oxidase biogenesis protein, mitochondrial
related to ABC1 - ubiquinol--cytochrome-c reductase complex assembly protein
related to Calcium influx promoting protein ehs1
related to Transformer-2 protein homolog
related to coatomer delta subunit (delta-coat protein)
putative cytochrome-c oxidase chain VI precursor
related to E2 ubiquitin-conjugating enzyme
putative DNA-directed RNA polymerases I and III subunit protein
putative H+ antiporter involved in multidrug resistance
glyceraldehyde 3-phosphate dehydrogenase (isoform A)
glyceraldehyde 3-phosphate dehydrogenase (isoform B)
related to RPO41 - DNA-directed RNA polymerase, mitochondrial
proteasome regulatory particle lid subunit RPN9
related to 26S proteasome regulatory particle chain RPN9
related to delta-6 fatty acid desaturase
related to SET2 - Histone methyltransferase
related to Pab1 dependent poly(A)-specific ribonuclease PAN3