Ustilago maydis 521 chromosome 4, whole genome shotgun sequence.
Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago.
Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis
Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (02-SEP-2014) Institute of Bioinformatics and Systems Biology, Helmholtz Zentrum Muenchen, German Research Center for Environmental Health (GmbH), Ingolstaedter Landstrasse 1, Neuherberg, Bavaria 85764, Germany
Submitted (23-JUL-2003) Whitehead Institute/MIT Center for Genome Research, 320 Charles Street, Cambridge, MA 02142, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM003143.\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 2014\nAssembly Method :: Arachne v. May-2005\nAssembly Name :: Umaydis521_2.0\nGenome Coverage :: 10.0x\nSequencing Technology :: Sanger\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##
related to short-chain dehydrogenase/reductase
putative trichothecene 3-O-acetyltransferase
putative Cytochrome P450 monooxygenase/Phenylacetate hydroxylase
related to 3-carboxy-cis,cis-muconate cycloisomerase
related to QDR2 multidrug transporter of the major facilitator superfamily
putative tricarboxylate secondary active transmembrane transporter
related to lignostilbene alpha,beta-dioxygenase I
related to postreplication repair protein uvsH/nuvA
putative F1F0-ATPase complex, subunit F1 gamma
putative translation initiation factor eIF2 beta subunit (isoform A)
putative translation initiation factor eIF2 beta subunit (isoform B)
related to multidrug resistance protein 1
related to peroxisomal targeting signal receptor
putative phosphate transport protein MIR1
putative ARP2/3 complex, subunit protein
related to ECM14 - involved in cell wall biogenesis and architecture
related to NUG1 - Nuclear GTPase (involved in Ribosome biogenesis)
putative anabolic serine and threonine dehydratase precursor
related to multidrug resistance protein 4
related to carboxylic acid transport protein JEN1
guanine nucleotide-binding protein subunit alpha-1
related to NCL1 - tRNA (cytosine-5-)-methyltransferase / probable Orotate phosphoribosyl transferase
related to CDC73 - DNA-directed RNA polymerase II accessory protein
putative phosphoenolpyruvate carboxykinase
related to VCX1 - Vacuolar Ca++/H+ exchanger
related to ATP17 - ATP synthase complex, subunit f
related to ATG4 - essential for autophagy
related to SPS19 - peroxisomal 2,4-dienoyl-CoA reductase
related to ATP-dependent DNA helicase II, 70 kDa subunit
related to MDR1 - Mac1p interacting protein
related to MNT4 - putative alpha-1,3-mannosyltransferase
related to SNU23 - component of snRNP involved in mRNA splicing
putative phosphoribosylformylglycinamidine synthase
U2-type spliceosomal complex subunit CWC24
Ferrichrome siderophore peptide synthetase
related to FUN30 - protein important for chromosome integrity and segregation
related to YAP1802 - protein involved in clathrin cage assembly
trifunctional dihydropteroate synthetase/dihydrohydroxymethylpterin pyrophosphokinase/dihydroneopterin aldolase FOL1
related to multifunctional folic acid synthesis protein
related to DnaJ homolog subfamily C member 3
25S rRNA (uracil2634-N3)-methyltransferase
related to endosomal protein EMP70 precursor
related to BET5 - component of the TRAPP complex
putative mevalonate pyrophosphate decarboxylase
related to BRX1 - Essential nucleolar protein required for biogenesis of the 60S ribosomal subunit
transcription initiation factor IIA large subunit
related to TOA1 - transcription factor TFIIA-L
putative DNA-directed RNA polymerase core subunit RPB10
putative serine/threonine-protein kinase PPG1
related to VPS53 - subunit of VP51-54 complex, required for protein sorting
related to DBP10 - putative ATP-dependent RNA helicase involved in ribosome biogenesis
related to SWH1 - Member of an oxysterol-binding protein family
related to MKC7 - aspartyl protease of the periplasmic space
related to DPB3 - third-largest subunit of DNA polymerase II
related to MLH1 - DNA mismatch repair protein
related to ALG11 - required for asparagine-linked glycosylation
related to YPT31 - GTP-binding protein of the rab family
chromatin-binding transcription regulator ADA2
related to ADA2 - general transcriptional adaptor or co-activator
putative DEAD box protein (RNA helicase)
related to IKS1 - putative serine/threonine kinase
related to EFR3 - protein required for Stt4-containing phosphoinositide kinase patch assembly
related to endoplasmic oxidoreductin 1 precursor
related to Rab geranylgeranyltransferase alpha subunit
related to RAD23 - nucleotide excision repair protein (ubiquitin-like protein)
related to YIP3 protein - proposed to be involved in ER to Golgi transport
related to SPT14 - N-acetylglucosaminyltransferase
related to YIP1 - Golgi integral membrane protein
putative 60S ribosome biogenesis protein
related to NAD-dependent deacetylase sirtuin type 4
Protein overlapping with rRNA (UMAG_05243, KIS70173.1) was converted to a misc_feature.
Protein overlapping with rRNA (UMAG_11789, KIS70174.1) was converted to a misc_feature.
related to Retrovirus-related POL polyprotein
related to MAM3 - Protein required for normal mitochondrial morphology
related to NADH-ubiquinone oxidoreductase 21.3 kDa subunit
putative NADPH-cytochrome P450 reductase
related to AGE2 - ADP-ribosylation factor and GTPase activating protein effector
related to SPC3 - signal peptidase subunit
related to J kappa-recombination signal binding protein
related to FSH3 - putative serine hydrolase
carbamoyl-phosphate synthase (glutamine-hydrolyzing) CPA1
related to carbamoyl-phosphate synthase small chain, arginine-specific, small chain, mitochondrial precursor
related to FLC2 - putative FAD transporter
related to TR4 orphan receptor associated protein TRA16
related to TRM112 - subunit of tRNA methyltransferase complex
putative vacuolar protein sorting/targeting protein
related to RPN14 proteasome-interacting protein involved in the assembly of the 19S proteasome
related to dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase
putative TFIIH/NER complex subunit protein
2-(3-amino-3-carboxypropyl)histidine synthase
related to DPH2 - diphtheria toxin resistance protein
related to CCC1 - Proposed vacuolar iron transport protein
S-adenosylmethionine-dependent methyltransferase
related to MTQ1 - S-adenosylmethionine-dependent methyltransferase
putative organic acid transmembrane transporter
exosome non-catalytic core subunit RRP40
related to RRP40 - protein involved in ribosomal RNA processing, component of the exosome complex
related to YAK1 - ser/thr protein kinase
mitochondrial 37S ribosomal protein MRPS9
related to MRPS9 - mitochondrial ribosomal protein, small subunit
related to RFX1 major transcriptional repressor of DNA-damage-regulated genes
related to MSS116 - RNA helicase of the DEAD box family, mitochondrial
glucosaminyl-phosphotidylinositol O-acyltransferase
related to GWT1 - GPI-anchored wall transfer protein
related to INP52 - phosphatidylinositol phosphate phosphatase
translation initiation factor eIF2B subunit delta
related to GCD2 - translation initiation factor eIF2B, 71 kDa (delta) subunit
related to RNA polymerase II mediator complex protein pmc1
related to CEX1 cytoplasmic component of the nuclear aminoacylation-dependent tRNA export pathway
putative translation initiation factor eIF3
putative F1F0-ATPase complex, subunit OSCP
related to nuclear distribution protein RO11
related to STU2 - Microtubule-associated protein (MAP) of the XMAP215/Dis1 family
dolichyl-phosphate beta-D-mannosyltransferase
related to DUG2 - putative di- and tri-peptidase
DNA-directed RNA polymerase III subunit C34
related to RPC34 - DNA-directed RNA polymerase III, 34 KD subunit
related to BNA4 - kynurenine 3-mono oxygenase
related to beta 1,4-mannosyltransferase (egghead protein)
related to Restin (intermediate filament-associated protein)
related to LSB6 - Phosphatidylinositol 4-kinase
related to Peroxisomal membrane protein PEX16
putative mitogen-activated protein kinase kinase
related to SCP160 - involved in control of mitotic chromsome transmission
related to siderophore iron transporter mirc
putative endo-1,4-beta-xylanase A precursor