Ustilago maydis 521 chromosome 2, whole genome shotgun sequence.
Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago.
Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis
Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (02-SEP-2014) Institute of Bioinformatics and Systems Biology, Helmholtz Zentrum Muenchen, German Research Center for Environmental Health (GmbH), Ingolstaedter Landstrasse 1, Neuherberg, Bavaria 85764, Germany
Submitted (23-JUL-2003) Whitehead Institute/MIT Center for Genome Research, 320 Charles Street, Cambridge, MA 02142, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM003141.\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 2014\nAssembly Method :: Arachne v. May-2005\nAssembly Name :: Umaydis521_2.0\nGenome Coverage :: 10.0x\nSequencing Technology :: Sanger\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##
putative proteasome regulatory particle base subunit RPT6
Fe-binding Fe/S cluster assembly protein ISA1
related to ISA1 - Fe/S cluster assembly protein
related to RRP3 - protein involved in rRNA processing
related to BZZ1 - Myo3/5p-Bee1p-Vrp1p actin assembly complex component
related to Smad nuclear interacting protein 1
succinate dehydrogenase iron-sulfur protein subunit SDH2
related to cyclopropane-fatty-acyl-phospholipid synthase
related to COP9 - signalosome complex subunit 4
related to BFR1 - Nuclear segregation protein
related to GIS2 - Putative zinc finger protein, proposed to be involved in the RAS/cAMP signaling pathway
putative glucan synthase subunit protein
tubulin-binding prefolding complex subunit YKE2
related to VRP1 - Proline-rich actin-associated protein involved in cytoskeletal organization and cytokinesis
related to SPR1 - exo-1,3-beta-glucanase precursor
related to HMT1 - hnRNP arginine N-methyltransferase
related to YEA4 - uridine diphosphate-N-acetylglucosamine transporter
related to PPN1 - vacuolar endopolyphosphatase
related to KCS1 - potential transcription factor of the BZIP type
related to Ral2 protein, implicated in activation of ras1
putative U6 snRNA-associated Sm-like protein LSm6
tRNA 1-methyladenosine methyltransferase subunit GCD14
related to GCD14 - translational repressor of GCN4
related to HYM1 - component of the RAM signaling network
related to TGS1 - trimethyl guanosine synthase
related to UBP8 - Ubiquitin-specific protease component of the SAGA complex
related to glucose regulated stress protein, HSP70-like
putative rab5-like GTPase involved in vacuolar protein sorting
related to BUR6 - subunit of a heterodimeric NC2 transcription regulator complex with Ncb2p
putative spindle pole body component, centrin
related to MPH1 - Member of the DEAH family of helicases
related to COX18 - mitochondrial inner membrane protein required for membrane insertion of C-terminus of Cox2p
putative DNA replication factor C subunit protein
related to DBP6 - ATP-dependent RNA helicase
related to TFIIH basal transcription factor complex p34 subunit
ubiquitin domain-containing protein DSK2
related to DSK2 - ubiquitin-like protein
putative translation elongation factor EF-1 alpha
related to TAF7 - TFIID subunit (TBP-associated factor), 67 kD
putative 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase
related to QCR6 - ubiquinol--cytochrome-c reductase 17K protein
related to LCB2 - serine C-palmitoyltransferase subunit
putative n-acetyl-gamma-glutamyl-phosphate reductase
related to Stress-activated map kinase interacting protein 1
related to SWC4 - component of the Swr1p complex
putative RAS GTPase-activating protein sar1
related to Spindle pole body component alp6
related to RTS2 - Basic zinc-finger protein, involved in UV response and DNA replication
putative serine hydroxymethyltransferase
related to RAX1 - Protein involved in determination of budding patterns
related to serine/threonine-protein kinase
decapping enzyme complex catalytic subunit
related to CYS3 - cystathionine gamma-lyase
related to NOG2 - GTPase involved in ribosomal large subunit-nucleus export
related to makorin ring zinc finger protein
related to carotenoid cleavage dioxygenase 1
related to RAD26 - DNA repair and recombination protein
related to ELF1 transcription elongation factor
related to ATP20 - subunit G of mitochondrial F1F0-ATP Synthase
putative Myosin regulatory light chain cdc4
related to ELC1 - Elongin C transcription elongation factor (C-terminal fragment)
N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase catalytic subunit ALG13
related to ALG13 - catalytic component of UDP-GlcNAc transferase
putative E2 ubiquitin-conjugating protein
related to YND1 - apyrase (NDPase/NTPase)
related to RKM1 - SET-domain lysine-N-methyltransferase
related to protein tyrosine phosphatase PPS1
putative phosphoribosylaminoimidazole carboxylase ADE2
translation initiation factor eIF2B subunit beta
related to GCD7 - translation initiation factor eIF2b, 43 kDa subunit
related to S-adenosylmethionine decarboxylase (spe-2)
related to ubiquitin-like protein activating enzyme
putative DNA polymerase epsilon, calytic subunit A
related to TGL5 - triacylglycerol lipase
related to CCC2 - copper resistance-associated P-type ATPase
putative bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase ADE17
related to BEM3 - GTPase-activating protein
related to protein arginine N-methyltransferase
related to ROM2 - GDP/GTP exchange factor for Rho1p
ubiquitin-binding serine/threonine protein kinase VPS15
related to VPS15 - ser/thr protein kinase
related to EPT1 - sn-1,2-diacylglycerol ethanolamine- and cholinephosphotransferase
related to NADPH:adrenodoxin oxidoreductase precursor, mitochondrial
putative 4-aminobutyrate aminotransferase
related to Delta-12 fatty acid desaturase
putative acyl-CoA dehydrogenase, medium-chain specific
siderophore biosynthesis regulatory protein URBS1
related to mfs-multidrug-resistance transporter
related to SHR3 - endoplasmic reticulum packaging chaperone
putative iron ion transmembrane transporter
putative GDP-mannose transmembrane transporter
related to BXI1 - protein involved in apoptosis
mitochondrial 37S ribosomal protein MRPS16
related to D-lactate dehydrogenase (cytochrome)
related to GRH1 - acetylated protein, involved in ER to Golgi transport
related to CHK1 - Serine/threonine kinase
related to AOS1 - Smt3p activating protein
putative ubiquinone biosynthesis, methyltransferase
related to SAS10 - involved in silencing
related to EPL1 - Component of histone H4/H2A acetyltransferase complex
related to CKB1 - casein kinase II, beta subunit
related to TOM22 - mitochondrial outer membrane import receptor complex subunit
related to ARV1 - protein functioning in transport of glycosylphosphatidylinositol intermediates into ER lumen
putative DEAH-box ATP-dependent RNA helicase PRP43
putative short chain 3-hydroxyacyl-CoA dehydrogenase
putative ATP synthase delta chain precursor
related to Exocyst complex component Sec3
related to YSC84 - protein involved in the organization of the actin cytoskeleton
related to carboxyphosphonoenolpyruvate phosphonomutase
oxysterol-binding protein related protein OSH3
related to OSH3 - Member of oxysterol-binding protein family
putative imidazoleglycerol-phosphate dehydratase HIS3
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
related to PGS1 - phosphatidylglycerophosphate synthase
putative proteasome regulatory particle lid subunit RPN8
related to IKI3 - Subunit of RNA polymerase II elongator histone acetyltransferase complex
cAMP-dependent protein kinase catalytic subunit
putative mitochondrial 54S ribosomal protein
related to YAF9 - Component of a chromatin modifying complex
related to Deoxyribodipyrimidine photo-lyase
putative DNA-directed RNA polymerase I core subunit RPA135
related to HEM3 - porphobilinogen deaminase
related to UTP18 - possible U3 snoRNP protein involved in maturation of pre-18S rRNA
related to MRM2 - mitochondrial rRNA methyl transferase
putative glutathione-disulfide reductase GLR1
mitochondrial 37S ribosomal protein RSM25
related to RSM25 - mitochondrial ribosomal protein, small subunit
related to POP4 - protein involved in processing of tRNAs and rRNAs
related to COX13 - cytochrome-c oxidase chain VIa
related to COX7 - cytochrome-c oxidase, subunit VII
related to PSY2 - subunit of protein phosphatase PP4 complex
snoRNA-binding rRNA-processing protein DIP2
related to DIP2 - Dom34p-interacting protein
related to PSF2 - part of GINS, replication multiprotein complex
related to BEM2 - GTPase-activating protein
related to golgi-specific brefeldin a-resistance guanine nucleotide exchange factor 1
related to Glucan 1,3-beta-glucosidase precursor
related to APG2 - required for sporulation
related to GYP1 - cis-golgi GTPase-activating protein
related to CDC50 - cell division protein
putative succinate dehydrogenase flavoprotein subunit SDH1
related to KTI12 - Elongator associated protein
related to TRF4 - topoisomerase I-related protein
related to MSF1 - phenylalanine--tRNA ligase alpha chain, mitochondrial
related to dedicator of cytokinesis protein 3
putative casein kinase 2 catalytic subunit CKA2
related to PUB1 - major polyadenylated RNA-binding protein of nucleus and cytoplasm
related to Rpc19 - DNA-directed RNA polymerases I and III, 18KD subunit
putative translation elongation factor 1 subunit beta
related to sulfide:quinone oxidoreductase, mitochondrial precursor
related to 8-amino-7-oxononanoate synthase
related to Deoxyribose-phosphate aldolase
related to TMT1 - trans-aconitate methyltransferase
related to PRY1 - strong similarity to the plant PR-1 class of pathogen related proteins
related to HLJ1 - Co-chaperone for Hsp40p
putative E2 ubiquitin-conjugating protein RAD6
related to mitochondrial import receptor subunit TOM20
25S rRNA (adenine2142-N1)-methyltransferase
putative flavoprotein-ubiquinone oxidoreductase
related to vacuolar segregation protein PEP7
related to KRE33 - essential protein, required for biogenesis of the small ribosomal subunit
related to SAL1 - member of the Ca2+-binding subfamily of the mitochondrial carrier family
MADS-box-containing transcription factor
related to eIF3l - translation initiation factor 3 subunit L
dolichyl-phosphate beta-glucosyltransferase
related to dolichyl-phosphate beta-glucosyltransferase
related to LAP3 - member of the GAL regulon
Signal recognition particle receptor subunit alpha
related to SRP101 - signal recognition particle receptor, alpha chain
putative beta-isopropyl-malate dehydrogenase
related to DCN1 - scaffold-type E3 ligase
mitochondrial 54S ribosomal protein YmL7/YmL5
related to 60s ribosomal protein l7, mitochondrial precursor
putative U6 snRNA-associated Sm-like protein
putative delta-1-pyrroline-5-carboxylate dehydrogenase
putative 60S ribosome biogenesis nucleolar G-protein
related to MDM31 - Mitochondrial inner membrane protein required for mitochondrial morphology and inheritance
related to ANT1 - peroxisomal ATP carrier
putative translation elongation factor 2
related to NAM8 - meiotic recombination protein
related to ubiquitin carboxyl-terminal hydrolase 36
related to VAC14 - protein involved in regulated synthesis of PtdIns(3,5)P(2)
putative proteasome core particle subunit beta 1
putative calcineurin regulatory subunit B
related to mitochondrial ribosomal protein S13
putative chaperonin-containing T-complex alpha subunit TCP1
putative Small nuclear ribonucleoprotein F
related to general alpha-glucoside permease
putative translationally-controlled tumor protein
related to diadenosine hexaphosphate (Ap6A) hydrolase
related to PTC5 - putative 2C protein phosphatase (PP2Cs)
related to AXL2 - required for axial pattern of budding
putative TRAPP complex core subunit BET3
putative 26S proteasome non-atpase regulatory subunit 8
related to RIX7 - AAA-type ATPase required for biogenesis and nuclear export of 60S ribosomal subunits
related to NOB1 - essential nuclear protein involved in proteasome maturation and synthesis of 40S ribosomal subunits
related to TIP41 - negatively regulates the TOR signaling pathway
snoRNA-binding rRNA-processing protein NOP14
related to NOP14 - nuclear and nucleolar protein with possible role in ribosome biogenesis
related to NADH-ubiquinone oxidoreductase B16.6 subunit
related to Vacuolar assembly protein VPS41
putative phosphoprotein phosphatase PP4 catalytic subunit PPH3
putative eukaryotic translation initiation factor 3 subunit D
related to Acetylcholinesterase precursor
putative isocitrate dehydrogenase (NAD(+)) IDH2
putative isocitrate dehydrogenase (NAD(+)) IDH1
related to DBP8 - ATP-dependent RNA helicase
related to BRE2 - subunit of COMPASS (Set1C) complex
putative ATP-binding cassette family ATPase
related to MOB2 - required for maintenance in ploidy
related to DNA-damage inducible protein 2
related to TIM50 - mitochondrial inner membrane import translocase subunit
related to NNT1 - putative nicotinamide N-methyltransferase
SCF ubiquitin ligase complex subunit GRR1
related to GRR1 - required for glucose repression and for glucose and cation transport
AMP-activated serine/threonine-protein kinase regulatory subunit SNF4
related to SNF4 - nuclear regulatory protein
related to eIF3m -translation initiation factor 3 subunit M
related to TRS23 - subunit of the transport protein particle (TRAPP) complex of the cis-Golgi
related to MSS1 - mitochondrial GTPase involved in expression of COX1
DNA-directed RNA polymerase I subunit RPA43
related to Rpa43 - 43 kD subunit of DNA-directed RNA polymerase I
rDNA-binding RNA polymerase I transcriptional factor
related to RRN3 - RNA polymerase I specific transcription factor
membrane protein involved in tumor formation
related to PAC2 - microtubule effector required for tubulin heterodimer formation
related to IMP1 - protease, mitochondrial
putative peptide alpha-N-acetyltransferase contributor
putative phosphatidylinositol(PI)/phosphatidylcholine(PC) transfer protein
related to phosphoprotein phosphatase 2C
putative beta-1,3 exoglucanase precursor
related to REX4 - strong similarity to X.laevis XPMC2 protein
related to UAF30 - subunit of upstream activation factor of RNA polymerase I
related to VPS17 - vacuolar protein sorting-associated protein
putative bifunctional chorismate synthase/riboflavin reductase [NAD(P)H] ARO2
related to LDB17 - protein involved in the regulation of endocytosis
related to ERG25 - C-4 methyl sterol oxidase
related to ALE1 - broad-specificity lysophospholipid acyltransferase
related to RSM27 - mitochondrial ribosomal protein, small subunit
related to NDE1 - mitochondrial cytosolically directed NADH dehydrogenase
related to SEY1 - GTPase with a role in ER morphology
related to Ras-GTPase-activating protein binding protein 2
related to RMT2 - protein-arginine N-methyltransferase
related to MDM10 - mitochondrial morphology and inheritance component
iron-sulfur cluster assembly protein CIA2
related to fumarylacetoacetate hydrolase
putative Cytochrome P450 monooxygenase/Phenylacetate hydroxylase
alternatively spliced; hypothetical protein (isoform A)
related to Crg1 protein (Putative arabinase)
related to high-affinity nickel transport protein nic1
related to AIF1 - mitochondrial cell death effector
related to Siderophore iron transporter 3
related to ATP-binding cassette transporter protein
related to N6-hydroxylysine acetyl transferase
siderophore peptide synthetase involved in ferrichromeA biosynthesis
related to MCH4 - monocarboxylate transporter
related to FRE3 - Ferric reductase, reduces siderophore-bound iron prior to uptake