Geobacillus kaustophilus HTA426 plasmid pHTA426, complete sequence.
Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Geobacillus; Geobacillus thermoleovorans group.
Thermoadaptation trait revealed by the genome sequence of thermophilic Geobacillus kaustophilus
Submitted (25-JUN-2003) Contact:Hideto Takami Japan Marine Science and Technology Center, Microbial Genome Analysis Research Group; 2-15 Natsushima-cho, Yokosuka, Kanagawa 237-0061, Japan URL :http://www.jamstec.go.jp/jamstec-e/bio/exbase.html
REFSEQ INFORMATION: The reference sequence is identical to\nAP006520.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/24/2022 00:57:50\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,650\nCDSs (total) :: 3,531\nGenes (coding) :: 3,388\nCDSs (with protein) :: 3,388\nGenes (RNA) :: 119\nrRNAs :: 9, 9, 9 (5S, 16S, 23S)\ncomplete rRNAs :: 9, 9, 9 (5S, 16S, 23S)\ntRNAs :: 87\nncRNAs :: 5\nPseudo Genes (total) :: 143\nCDSs (without protein) :: 143\nPseudo Genes (ambiguous residues) :: 0 of 143\nPseudo Genes (frameshifted) :: 60 of 143\nPseudo Genes (incomplete) :: 93 of 143\nPseudo Genes (internal stop) :: 16 of 143\nPseudo Genes (multiple problems) :: 21 of 143\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_011229476.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_012820758.1
COORDINATES: similar to AA sequence:RefSeq:WP_008881775.1
COORDINATES: similar to AA sequence:RefSeq:WP_011229480.1
COORDINATES: similar to AA sequence:RefSeq:WP_013878226.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015262168.1
GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
Dam family site-specific DNA-(adenine-N6)-methyltransferase
COORDINATES: protein motif:HMM:NF021040.2
AlwI family type II restriction endonuclease
COORDINATES: similar to AA sequence:RefSeq:WP_006322110.1
COORDINATES: similar to AA sequence:RefSeq:WP_012575955.1
COORDINATES: similar to AA sequence:RefSeq:WP_011229486.1
IS66-like element ISGka4 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_015863245.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011229488.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011230271.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]
GO:0015689 - molybdate ion transport [Evidence IEA]
molybdate ABC transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018700230.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013401132.1
COORDINATES: similar to AA sequence:RefSeq:WP_012953350.1
COORDINATES: similar to AA sequence:RefSeq:WP_015374559.1
xanthine dehydrogenase family protein subunit M
COORDINATES: similar to AA sequence:RefSeq:WP_017729046.1
COORDINATES: similar to AA sequence:RefSeq:WP_015374557.1
xanthine dehydrogenase family protein molybdopterin-binding subunit
COORDINATES: protein motif:HMM:NF024214.2
COORDINATES: protein motif:HMM:NF024869.2
COORDINATES: similar to AA sequence:RefSeq:WP_017729043.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017729099.1
class I adenylate-forming enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017729409.1
COORDINATES: similar to AA sequence:RefSeq:WP_015374563.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017729030.1
COORDINATES: similar to AA sequence:RefSeq:WP_012749253.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
DDE-type integrase/transposase/recombinase
COORDINATES: similar to AA sequence:RefSeq:WP_017729031.1
COORDINATES: similar to AA sequence:RefSeq:WP_017729032.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012748996.1
GO:0004803 - transposase activity [Evidence IEA]
ISLre2-like element ISGsp3 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_017727544.1
non-oxidative hydroxyarylic acid decarboxylases subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_015863243.1
COORDINATES: similar to AA sequence:RefSeq:WP_003353599.1
COORDINATES: similar to AA sequence:RefSeq:WP_012820778.1
COORDINATES: similar to AA sequence:RefSeq:WP_012820777.1
GO:0030420 - establishment of competence for transformation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012820776.1
COORDINATES: similar to AA sequence:RefSeq:WP_012820775.1
COORDINATES: similar to AA sequence:RefSeq:WP_012820774.1
COORDINATES: similar to AA sequence:RefSeq:WP_012820773.1
COORDINATES: similar to AA sequence:RefSeq:WP_015863235.1