Candidatus Sodalis pierantonius str. SOPE chromosome, complete genome.
type: Entry
definition: Candidatus Sodalis pierantonius str. SOPE chromosome, complete genome.
sequence version: NZ_CP006568.1
sequence date: 2023-02-05
sequence: sequence
division: CON
label: NZ_CP006568.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02641641
keyword: RefSeq
source: Candidatus Sodalis pierantonius str. SOPE
organism: Candidatus Sodalis pierantonius str. SOPE
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Bruguierivoracaceae; Sodalis.
reference: 1
references: 24407854
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP006568.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nSource DNA is available upon request.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Phred/Phrap v. 2.0\nGenome Coverage :: 8X\nSequencing Technology :: Sanger dideoxy sequencing\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/05/2023 18:24:45\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,652\nCDSs (total) :: 4,582\nGenes (coding) :: 3,240\nCDSs (with protein) :: 3,240\nGenes (RNA) :: 70\nrRNAs :: 2, 5, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 5, 2 (5S, 16S, 23S)\ntRNAs :: 55\nncRNAs :: 6\nPseudo Genes (total) :: 1,342\nCDSs (without protein) :: 1,342\nPseudo Genes (ambiguous residues) :: 0 of 1,342\nPseudo Genes (frameshifted) :: 765 of 1,342\nPseudo Genes (incomplete) :: 495 of 1,342\nPseudo Genes (internal stop) :: 404 of 1,342\nPseudo Genes (multiple problems) :: 297 of 1,342\nPseudo Genes (short protein) :: 1 of 1,342\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000340
sequence length: 4513140
topology: circular
so has quality: SO_0000988
location: 1..4513140
location: region:1-4513140:1
RO_0002162: 2342

NZ_CP006568
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02641641
type: BioSample
SIO_000068: biosample

1
title: Genome degeneration and adaptation in a nascent stage of symbiosis
author: Oakeson, K.F.
author: Gil, R.
author: Clayton, A.L.
author: Dunn, D.M.
author: von Niederhausern, A.C.
author: Hamil, C.
author: Aoyagi, A.
author: Duval, B.
author: Baca, A.
author: Silva, F.J.
author: Vallier, A.
author: Jackson, D.G.
author: Latorre, A.
author: Weiss, R.B.
author: Heddi, A.
author: Moya, A.
author: Dale, C.
journal: Genome Biol Evol
volume: 6
issue: 1
pages: 76-93
year: 2014
pubmed: 24407854

24407854
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Oakeson, K.F.
author: Clayton, A.L.
author: Gil, R.
author: Dunn, D.M.
author: von Niederhausern, A.C.
author: Baca, A.
author: Heddi, A.
author: Weiss, R.B.
author: Dale, C.
journal: Submitted (06-JUN-2013) Biology, University of Utah, 257 S 1400 E Rm 201, Salt Lake City, UT 84112, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4513140:1
position: 4513140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-4513140:1:source
so part of: sequence
organism: Candidatus Sodalis pierantonius str. SOPE
mol type: genomic DNA
strain: SOPE
host: Sitophilus oryzae

2342
type: Taxonomy
SIO_000068: taxonomy

SOPEG_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: mnmG
locus tag: SOPEG_RS00005
old locus tag: SOPEG_0001
so part of: sequence
location: 351..2240
location: region:351-2240:1
so has part: feature:351-2240:1:exon
subclass of: SO_0000010

position:351:1
position: 351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2240:1
position: 2240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351-2240:1:exon

SOPEG_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: mnmG
locus tag: SOPEG_RS00005
old locus tag: SOPEG_0001
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1
GO function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
translation: MYYPDHFDVIIIGGGHAGTEAAMASARMGCQTLLLTHNIDTLGQMSCNPAIGGIGKGNLVKEIDAMGGLMAQAIDKAGIQFRILNASKGPAVRATRAQADRVLYRQAVRGALENQPNLMIFQQAVEDLIVDGDRVVGAVTQMGLKFRTRAVVLTVGTFLDGKIHIGMDHYSGGRAGDPPSISLSRRLRELPFRVNRLKTGTPPRIDARSIDFSQLATQHGDDPLPVFSFLGSADQHLRQIPCYITYTNEKTHEVIRQNLDRSPMYAGIIEGVGPRYCPSIEDKVMRFADRDAHQIFLEPEGLISNEIYPNGISTSLPFDVQMKIVHSMRGLENARIVRPGYAIEYDFFDPRDLKLTLESKLIAGLFFAGQINGTTGYEEAAAQGMLAGLNAARLATDKEGWSPRRDQAYLGVLVDDLCTLGTKEPYRMFTSRAEYRLLLREDNADLRLTEIGRQLGLVDEVRWARFCAKQEQIALERQRLRDIWVHPDSEGVEQLNPLLKAPLTREANGEELLRRPEMDYARLTGLDRFGPALTDDQAAEQVGIQIKYQGYIARQQEEIARQMRNEHTLLPVDMDFSAVSGLSNEVIAKLNDHKPNSIGQASRISGVTPAAISILLVWLKKQGLLRRSA
SIO_010081: SOPEG_RS00005
subclass of: SO_0000673
so part of: SOPEG_RS00005
location: 351..2240
location: region:351-2240:1
so has part: feature:351-2240:1:exon

WP_025243820.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:351-2240:1:exon

SOPEG_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rsmG
locus tag: SOPEG_RS00010
old locus tag: SOPEG_0002
so part of: sequence
location: 2258..2878
location: region:2258-2878:1
so has part: feature:2258-2878:1:exon
subclass of: SO_0000010

position:2258:1
position: 2258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2878:1
position: 2878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2258-2878:1:exon

SOPEG_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rsmG
locus tag: SOPEG_RS00010
old locus tag: SOPEG_0002
EC number: 2.1.1.170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012147576.1
GO component: GO:0005575 - cellular_component [Evidence IEA]
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
GO process: GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
translation: MLETLETLLGQADMALSAAQKKQLLGYVGLLHKWNKAYNLTSVRSPEQMLVRHIMDSIVVNPHLRGDRFIDVGTGPGLPGIPLAIVRPEAHFTLLDSLGKRIRFLRQVQHELGLDNVTAVQSRVESFTPSAGFDGVISRAFASHGDMLTWCAALPAKEKGRFYALKGQLSEAELTALPPGFRLESVIGLQVPGLEGERHIVVVAAN
SIO_010081: SOPEG_RS00010
subclass of: SO_0000673
so part of: SOPEG_RS00010
location: 2258..2878
location: region:2258-2878:1
so has part: feature:2258-2878:1:exon

WP_025243821.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2258-2878:1:exon

SOPEG_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: atpI
locus tag: SOPEG_RS00015
old locus tag: SOPEG_0003
so part of: sequence
location: 3510..3884
location: region:3510-3884:1
so has part: feature:3510-3884:1:exon
subclass of: SO_0000010

position:3510:1
position: 3510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3884:1
position: 3884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3510-3884:1:exon

SOPEG_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: atpI
locus tag: SOPEG_RS00015
old locus tag: SOPEG_0003
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412213.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit I
translation: MTLALYGGKVAGKLLFAQLMTLVLFSVLFALQSPRAAASAAGGGLAAWLPNVVFMLFACRHQAAVSGRIAWSFSVGEGLKMAATIALLVVALGMFKAAFVPLGLTYLSVLIVQILAPAVINNKG
SIO_010081: SOPEG_RS00015
subclass of: SO_0000673
so part of: SOPEG_RS00015
location: 3510..3884
location: region:3510-3884:1
so has part: feature:3510-3884:1:exon

WP_025243822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3510-3884:1:exon

SOPEG_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: atpB
locus tag: SOPEG_RS00020
old locus tag: SOPEG_0004
so part of: sequence
location: 3893..4711
location: region:3893-4711:1
so has part: feature:3893-4711:1:exon
subclass of: SO_0000010

position:3893:1
position: 3893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4711:1
position: 4711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3893-4711:1:exon

SOPEG_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: atpB
locus tag: SOPEG_RS00020
old locus tag: SOPEG_0004
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002228150.1
GO component: GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
GO function: GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit A
translation: MSASGEIATPQEYIGHHLNNLQLDLRTFELVNPHSAASFWVLNIDSMFFSLLLGAIFLLIFDRIAKGATSGVPGKMLTFVELVVGFVDGSVRDMFHGKSKLIAPLALTIFVWVFLMNLMDLLPIDLLPYLGEHVLGLPALRVVPSADVNITLSMALGVFILILYYSVTMKGIGGFVKELTLQPFNHPIFIPVNLILEGVSLLSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLAMASEEH
SIO_010081: SOPEG_RS00020
subclass of: SO_0000673
so part of: SOPEG_RS00020
location: 3893..4711
location: region:3893-4711:1
so has part: feature:3893-4711:1:exon

WP_038467949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3893-4711:1:exon

SOPEG_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: atpE
locus tag: SOPEG_RS00025
old locus tag: SOPEG_0005
so part of: sequence
location: 4761..5000
location: region:4761-5000:1
so has part: feature:4761-5000:1:exon
subclass of: SO_0000010

position:4761:1
position: 4761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5000:1
position: 5000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4761-5000:1:exon

SOPEG_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: atpE
locus tag: SOPEG_RS00025
old locus tag: SOPEG_0005
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1
GO function: GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit C
translation: MENLNMDLLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPDLIPLLRTQFFIVMGLVDAIPMIAVGLGLYVMFAVA
SIO_010081: SOPEG_RS00025
subclass of: SO_0000673
so part of: SOPEG_RS00025
location: 4761..5000
location: region:4761-5000:1
so has part: feature:4761-5000:1:exon

WP_000429386.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4761-5000:1:exon

SOPEG_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: atpF
locus tag: SOPEG_RS00030
old locus tag: SOPEG_0006
so part of: sequence
location: 5058..5528
location: region:5058-5528:1
so has part: feature:5058-5528:1:exon
subclass of: SO_0000010

position:5058:1
position: 5058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5528:1
position: 5528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5058-5528:1:exon

SOPEG_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: atpF
locus tag: SOPEG_RS00030
old locus tag: SOPEG_0006
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1
GO function: GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit B
translation: MNLNATILGQAIAFVLFVLFCMKYVWPPLMAAIEKRQKEIADGLASAERAKKDLDIAQAEATDHLKQAKVEAQAIIEQANKRKAQVVDEAKAEAEAERNKILAQVQAEIDAERKRAREELRKQVAMLALAGAEKIIERSVDEAANSDIVDKIVAEL
SIO_010081: SOPEG_RS00030
subclass of: SO_0000673
so part of: SOPEG_RS00030
location: 5058..5528
location: region:5058-5528:1
so has part: feature:5058-5528:1:exon

WP_025243824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5058-5528:1:exon

SOPEG_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: atpH
locus tag: SOPEG_RS00035
old locus tag: SOPEG_0007
so part of: sequence
location: 5542..6075
location: region:5542-6075:1
so has part: feature:5542-6075:1:exon
subclass of: SO_0000010

position:5542:1
position: 5542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6075:1
position: 6075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5542-6075:1:exon

SOPEG_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: atpH
locus tag: SOPEG_RS00035
old locus tag: SOPEG_0007
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit delta
translation: MSELVTVARSYAKAAFDFAVEHQDVAHWQLMLAFSAEVSRNERIAKLLSGAVAPEKLAQTFIAVCGEALDASGQNLIRVMAENGRLAVLPDVLEQFILLRAAQEATVEVDVISASTLKEEQLAKISAAMEQRLSRKVKLNCKIDKSVVAGVVIRAGDMVIDGSVRGRLERLADVLQS
SIO_010081: SOPEG_RS00035
subclass of: SO_0000673
so part of: SOPEG_RS00035
location: 5542..6075
location: region:5542-6075:1
so has part: feature:5542-6075:1:exon

WP_025243825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5542-6075:1:exon

SOPEG_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: atpA
locus tag: SOPEG_RS00040
old locus tag: SOPEG_0008
so part of: sequence
location: 6088..7629
location: region:6088-7629:1
so has part: feature:6088-7629:1:exon
subclass of: SO_0000010

position:6088:1
position: 6088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7629:1
position: 7629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6088-7629:1:exon

SOPEG_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: atpA
locus tag: SOPEG_RS00040
old locus tag: SOPEG_0008
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1
GO component: GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO function: GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit alpha
translation: MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLAEVMQGEMIALPGNRFAIALNLERDSVGAVVMGPYADLAEGTKVKYTGRILEVPVGRGLLGRVVNTLGAPIDGKGPLEHDGFSAVEAIAPGVIERQSVDEPVQTGYKSVDAMIPIGRGQRELIIGDRQTGKSALAIDAIINQRDSGIKCIYVAIGQKASTIANVVRKLEEHGAVANTIVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNAEYVENYTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRELAAFSQFASDLDDATRKQLNHSQKVTELLKQKQYAPMSVAQQALVLFAAERGYLEDVELEKIGDFEAALMAYVDREQGELMQQINQTGAYNDDIEGKLKGILDTFKATQSW
SIO_010081: SOPEG_RS00040
subclass of: SO_0000673
so part of: SOPEG_RS00040
location: 6088..7629
location: region:6088-7629:1
so has part: feature:6088-7629:1:exon

WP_025243826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6088-7629:1:exon

SOPEG_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: atpG
locus tag: SOPEG_RS00045
old locus tag: SOPEG_0009
so part of: sequence
location: 7680..8543
location: region:7680-8543:1
so has part: feature:7680-8543:1:exon
subclass of: SO_0000010

position:7680:1
position: 7680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8543:1
position: 8543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7680-8543:1:exon

SOPEG_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: atpG
locus tag: SOPEG_RS00045
old locus tag: SOPEG_0009
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1
GO component: GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO function: GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit gamma
translation: MADAKEISSKIASVQNTQKITKAMEMVAASKMGKTQERMASSRPYAETMRKVIGHLALGNLEYKHPYLDERDVKRVGYLVVATDRGLAGGLNINLFKKLLADMKEWNEKGVETELALIGSKAVSFFNSVGSKVVAQVTGMGDNPTLSELIGPVKVMLQAYDEGRLDKLYIVSNKFVNTMSQVPQILQILPLPPAEEADLKTKSWDYLYEPDPKTLLDTLLRRYVESQVYQGVVENLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQTSITQELTEIVSGAAAV
SIO_010081: SOPEG_RS00045
subclass of: SO_0000673
so part of: SOPEG_RS00045
location: 7680..8543
location: region:7680-8543:1
so has part: feature:7680-8543:1:exon

WP_025243827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7680-8543:1:exon

SOPEG_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: atpD
locus tag: SOPEG_RS00050
old locus tag: SOPEG_0010
so part of: sequence
location: 8570..9952
location: region:8570-9952:1
so has part: feature:8570-9952:1:exon
subclass of: SO_0000010

position:8570:1
position: 8570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9952:1
position: 9952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8570-9952:1:exon

SOPEG_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: atpD
locus tag: SOPEG_RS00050
old locus tag: SOPEG_0010
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1
GO component: GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO function: GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit beta
translation: MATGNVIQVIGAVVDVEFPQDAVPKVYNALEVENGAAKLVLEVEQQLGGGVVRCIAMGSSDGLRRGLKVTDLERAIEVPVGKATLGRIMNVLGEPVDMKGDIGEEERWSIHRPAPSYEELASSQDLLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILGMDELSEDDKLVVSRARKIQRFLSQPFFVAEVFTGSPGKYVALKDTIRGFKGIMDGEYDHLPERAFYMVGSIDEAVEKGKKL
SIO_010081: SOPEG_RS00050
subclass of: SO_0000673
so part of: SOPEG_RS00050
location: 8570..9952
location: region:8570-9952:1
so has part: feature:8570-9952:1:exon

WP_025243828.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8570-9952:1:exon

SOPEG_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00055
old locus tag: SOPEG_0011
so part of: sequence
location: 9973..10395
location: region:9973-10395:1
so has part: feature:9973-10395:1:exon
subclass of: SO_0000010

position:9973:1
position: 9973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10395:1
position: 10395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9973-10395:1:exon

SOPEG_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00055
old locus tag: SOPEG_0011
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002215546.1
GO function: GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit epsilon
translation: MAAKTYYLDVVSAEKQMFSGLVEKIQMTGSGGELGIFPGHAPLLTAIKPGMVRIVKEHGNEEYIYLSGGVLEVQPSTVTVLADAAIRGKDLDEARAMESKRKAEEHINNSHGDIDYAQASAELSKALAKLRVIELTKKVM
SIO_010081: SOPEG_RS00055
subclass of: SO_0000673
so part of: SOPEG_RS00055
location: 9973..10395
location: region:9973-10395:1
so has part: feature:9973-10395:1:exon

WP_025243829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9973-10395:1:exon

SOPEG_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00060
old locus tag: SOPEG_0012
so part of: sequence
location: 10513..11721
location: region:10513-11721:1
so has part: feature:10513-11721:1:exon
subclass of: SO_0000010

position:10513:1
position: 10513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11721:1
position: 11721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10513-11721:1:exon

SOPEG_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00060
old locus tag: SOPEG_0012
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256-like element ISSoEn2 family transposase
translation: MDEKQLQALANELAKNLKTPEDLSHFDRLLKKISVEAALNAEMTHHLGYDKNQPKPGTNARNGYSTKTVITGDGPLALRTPRDRDGSFEPQLVKKNQTRITGMDNQILSLYAKGMTTREIAAAFKELYDADVSPALVSKVTDAVMEQVVEWQNRPLDAVYPIVYLDCIVLKVRQDSRIINKSVFLALGINIEGQKELLGMWLAENEGAKFWLNVLTELKNRGLNDILIACVDGLKGFPDAINAVYPEARLQLCIVHMVRNSLRFVSWKDYKAVTRDLKAIYQAPTKEAGLQALEAFSSAWDIRYPQISRSWQTNWANLATFFAYPTDIRKVIYTTNAIESLNSVIRHAIKKRKVFPTDDAVKKVVWLAIQAASQKWTMPLRDWRMAMSRFIIEFGDRLDGHF
SIO_010081: SOPEG_RS00060
subclass of: SO_0000673
so part of: SOPEG_RS00060
location: 10513..11721
location: region:10513-11721:1
so has part: feature:10513-11721:1:exon

WP_025243830.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10513-11721:1:exon

SOPEG_RS23660
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: istA
locus tag: SOPEG_RS23660
old locus tag: SOPEG_ps0013
pseudo: true
so part of: sequence
location: 12040..13589
location: region:12040-13589:1
so has part: feature:12040-13589:1:exon
subclass of: SO_0000010

position:12040:1
position: 12040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13589:1
position: 13589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12040-13589:1:exon

SOPEG_RS23660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: istA
locus tag: SOPEG_RS23660
old locus tag: SOPEG_ps0013
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025245097.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21 family transposase
SIO_010081: SOPEG_RS23660
subclass of: SO_0000673
so part of: SOPEG_RS23660
location: 12040..13589
location: region:12040-13589:1
so has part: feature:12040-13589:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12040-13589:1:exon

SOPEG_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: istB
locus tag: SOPEG_RS00075
old locus tag: SOPEG_ps0014
pseudo: true
so part of: sequence
location: 13601..14349
location: region:13601-14349:1
so has part: feature:13601-14349:1:exon
subclass of: SO_0000010

position:13601:1
position: 13601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14349:1
position: 14349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13601-14349:1:exon

SOPEG_RS00075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: istB
locus tag: SOPEG_RS00075
old locus tag: SOPEG_ps0014
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025245096.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21-like element ISSoEn3 family helper ATPase IstB
SIO_010081: SOPEG_RS00075
subclass of: SO_0000673
so part of: SOPEG_RS00075
location: 13601..14349
location: region:13601-14349:1
so has part: feature:13601-14349:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13601-14349:1:exon

SOPEG_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00080
old locus tag: SOPEG_ps0015
pseudo: true
so part of: sequence
location: 14518..15727
location: region:14518-15727:1
so has part: feature:14518-15727:1:exon
subclass of: SO_0000010

position:14518:1
position: 14518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15727:1
position: 15727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14518-15727:1:exon

SOPEG_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00080
old locus tag: SOPEG_ps0015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS256-like element ISSoEn2 family transposase
SIO_010081: SOPEG_RS00080
subclass of: SO_0000673
so part of: SOPEG_RS00080
location: 14518..15727
location: region:14518-15727:1
so has part: feature:14518-15727:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14518-15727:1:exon

SOPEG_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: glmU
locus tag: SOPEG_RS00085
old locus tag: SOPEG_0016
so part of: sequence
location: 15925..17301
location: region:15925-17301:1
so has part: feature:15925-17301:1:exon
subclass of: SO_0000010

position:15925:1
position: 15925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17301:1
position: 17301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15925-17301:1:exon

SOPEG_RS00085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: glmU
locus tag: SOPEG_RS00085
old locus tag: SOPEG_0016
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002215550.1
GO function: GO:0019134 - glucosamine-1-phosphate N-acetyltransferase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0003977 - UDP-N-acetylglucosamine diphosphorylase activity [Evidence IEA]
GO process: GO:0000902 - cell morphogenesis [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0006048 - UDP-N-acetylglucosamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
translation: MSNRALSVVVLAAGKGSRMFSALPKVLHPLAGKALVQHVIDAATQLGAARIHLVYGHGGELLRERLARQDAPLNWVLQAEQRGTGHAVQQTLADLRDEEDVLILYGDVPLISPDTLQRLLTARPEGGIGLLTVTLDNPEGYGRIVRTDGEVVGIVEQKDASEQQRQIKEINTGILVAGGGDLKRWLGQLTNHNAQGEFYLTDIIAMAWHEGRKINTVQPSRHSEVEGVNNRLQLARLERLFQQEQAERLLLAGVMLSDPMRFDLRGELRHGQDVSIDTNVILEGRVTLGNRVIIGTGCVLKNVVIGDDVVVSPYTVIEDARVAAHSTLGPFARLRPGSELEEGAHVGNFVEMKQARLGKGSKAGHLSYLGDAEIGAQVNIGAGTITCNYDGANKHKTVIGDNVFVGSDSQLVAPVTLGRGATIGAGTTVTRDVADGEMVISRIRQFPIANWTRPVKKK
SIO_010081: SOPEG_RS00085
subclass of: SO_0000673
so part of: SOPEG_RS00085
location: 15925..17301
location: region:15925-17301:1
so has part: feature:15925-17301:1:exon

WP_025243832.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15925-17301:1:exon

SOPEG_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: glmS
locus tag: SOPEG_RS00090
old locus tag: SOPEG_0017
so part of: sequence
location: 17450..19282
location: region:17450-19282:1
so has part: feature:17450-19282:1:exon
subclass of: SO_0000010

position:17450:1
position: 17450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19282:1
position: 19282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17450-19282:1:exon

SOPEG_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: glmS
locus tag: SOPEG_RS00090
old locus tag: SOPEG_0017
EC number: 2.6.1.16
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312698.1
GO function: GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO process: GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine--fructose-6-phosphate transaminase (isomerizing)
translation: MCGIVGAVAQRDIAEILLEGLRRLEYRGYDSAGLAVVDNDGHLQRLRRVGKVSALTEAAQAHPLSGGTGIAHTRWATHGEPTENNAHPHVSGHIVVVHNGIIENHEPLCEQLRERGYTFVTQTDTEVIAHLAHWEQRQQGGALFEVMQRVVGALRGAYGTVIMDSRDPSVLVAARSGSPLVIGRGVGENFLVSDQLALLPVTRRFMFLEEGDIAEITRRTVRVWDQAGESVERPEIESQVKYDVGDKGLYRHYMQKEIFEQPQAIKNTLEGRFSHGEVTLSELGDGADALLRQVQHVQIIACGTSYHSAMVSRYWFEALAGVPCDVEIASEFRYRKPAVRPDSLLITLSQSGETADTLAALRLTKALGYLGSLAICNVAGSSLVRESDMALMTRAGTEIGVASTKAFTTQLTVLLMLVARIGRPRGMDQGVEEDIVHALQVLPSRIEQMLSLDKPIETLAEGFSDKHHALFLGRGDLYPIAMEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVIAPNNELLKKLKSNIEEVRARGGLLYVFAEQDAGFTASENMKIIPLPHVEQIVAPIFYTVPMQLLAYHIALIKGTDVDQPRNLAKSVTVE
SIO_010081: SOPEG_RS00090
subclass of: SO_0000673
so part of: SOPEG_RS00090
location: 17450..19282
location: region:17450-19282:1
so has part: feature:17450-19282:1:exon

WP_025243833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17450-19282:1:exon

SOPEG_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00095
old locus tag: SOPEG_ps0018
so part of: sequence
location: 19677..20702
location: region:19677-20702:1
so has part: feature:19677-20702:1:exon
subclass of: SO_0000010

position:19677:1
position: 19677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20702:1
position: 20702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19677-20702:1:exon

SOPEG_RS00095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00095
old locus tag: SOPEG_ps0018
inference: COORDINATES: protein motif:HMM:NF025034.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartyl protease family protein
translation: MDSRYACRPFWACLAVVLVASPCAPTFAAPAAGENPPVLHEPVHLLHLVVPVIIADNTYRFVLDTGASYTVIDKRLAQTLTRPATPDEIPSIFRTIMANGVGSTQGKLGADQVSLWRSLPITLGSYTLPGINPWLAIDLDIFSQSLGEKVDGVLGAEVFRQLSWAVDNRSHQLTAWRHSPSLMGYQQCLPYEDQFGRSPVLTLDYKAYSISMVVDTGAVQSFVSEELIGRMKKQYRNVTTGYRQTPSATASGLGHDNDYLIDGLTFNGMPVGRMKISGNKNDMYNLGMDFFSRFDRPDQMLFCYNARHFTRNDKEPLRNIGALLNKSEIFDDFLPIRAIVT
SIO_010081: SOPEG_RS00095
subclass of: SO_0000673
so part of: SOPEG_RS00095
location: 19677..20702
location: region:19677-20702:1
so has part: feature:19677-20702:1:exon

WP_051419361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19677-20702:1:exon

SOPEG_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00100
old locus tag: SOPEG_0019
so part of: sequence
location: complement(20695..21618)
location: region:20695-21618:-1
so has part: feature:20695-21618:-1:exon
subclass of: SO_0000010

position:20695:-1
position: 20695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21618:-1
position: 21618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20695-21618:-1:exon

SOPEG_RS00100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00100
old locus tag: SOPEG_0019
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDLTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDSIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKIFGEGEWKVRQHGAERRRVWRKLHLAVDSATHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKILLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS00100
subclass of: SO_0000673
so part of: SOPEG_RS00100
location: complement(20695..21618)
location: region:20695-21618:-1
so has part: feature:20695-21618:-1:exon

WP_025243834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20695-21618:-1:exon

SOPEG_RS22305
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS22305
old locus tag: SOPEG_ps0020
pseudo: true
so part of: sequence
location: complement(<21691..22413)
location: region:21691-22413:-1
so has part: feature:21691-22413:-1:exon
subclass of: SO_0000010

position:21691:-1
position: 21691
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:22413:-1
position: 22413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21691-22413:-1:exon

SOPEG_RS22305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS22305
old locus tag: SOPEG_ps0020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: SOPEG_RS22305
subclass of: SO_0000673
so part of: SOPEG_RS22305
location: complement(<21691..22413)
location: region:21691-22413:-1
so has part: feature:21691-22413:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21691-22413:-1:exon

SOPEG_RS23665
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS23665
old locus tag: SOPEG_ps0021
pseudo: true
so part of: sequence
location: <22490..23094
location: region:22490-23094:1
so has part: feature:22490-23094:1:exon
subclass of: SO_0000010

position:22490:1
position: 22490
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:23094:1
position: 23094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22490-23094:1:exon

SOPEG_RS23665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS23665
old locus tag: SOPEG_ps0021
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
SIO_010081: SOPEG_RS23665
subclass of: SO_0000673
so part of: SOPEG_RS23665
location: <22490..23094
location: region:22490-23094:1
so has part: feature:22490-23094:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22490-23094:1:exon

SOPEG_RS22310
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS22310
old locus tag: SOPEG_0022
so part of: sequence
location: complement(23136..23861)
location: region:23136-23861:-1
so has part: feature:23136-23861:-1:exon
subclass of: SO_0000010

position:23136:-1
position: 23136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23861:-1
position: 23861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23136-23861:-1:exon

SOPEG_RS22310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS22310
old locus tag: SOPEG_0022
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQNLMNVQYLTMSSLDFLNNIINPSREAAGENPVRPSDFHARVIDEIGEELNYENFVVGKTGHKTYYAMLSMEQMTLVGMRESKAVLRAVLEKLKELSHRPQMTQAELIAAMAELNVAQERRLKSVETQVEQVAEELDHIKQGTIPEGYQGYSYLQATYGLSNAKSKQLVMAWSVPYKKVPHVAPGGQVTQMSVVHENNFVSALSNMMYEAEQRGTQWYHPKIGRFSIAGWEVDGNNRFVE
SIO_010081: SOPEG_RS22310
subclass of: SO_0000673
so part of: SOPEG_RS22310
location: complement(23136..23861)
location: region:23136-23861:-1
so has part: feature:23136-23861:-1:exon

WP_025243836.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23136-23861:-1:exon

SOPEG_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00120
old locus tag: SOPEG_0023
so part of: sequence
location: complement(24120..24833)
location: region:24120-24833:-1
so has part: feature:24120-24833:-1:exon
subclass of: SO_0000010

position:24120:-1
position: 24120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24833:-1
position: 24833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24120-24833:-1:exon

SOPEG_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00120
old locus tag: SOPEG_0023
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001617183.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BRO family protein
translation: MTPFYFERHEVRTIMLNGESWFVAQDVCAALQIQNVTQSIEKLDDDERSMFNIGLSHRDMFDNRVQQINIISESGMFTLVLRYRDAVKQGTLPHRFRKWVTNEVLPSIRKTGSYGHRKPKTLGDLTGTAATAELAALVDKLQRIIHEGEFIPAGSRRNYSLPANRKHEQTIIRDFLTKDESSTILMLLAWLRADGFDMTAAEREIDVIRGYVGSMRRSMGNIQTHAQYIDHAVRVVN
SIO_010081: SOPEG_RS00120
subclass of: SO_0000673
so part of: SOPEG_RS00120
location: complement(24120..24833)
location: region:24120-24833:-1
so has part: feature:24120-24833:-1:exon

WP_038467959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24120-24833:-1:exon

SOPEG_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00125
old locus tag: SOPEG_0024
so part of: sequence
location: 25278..25736
location: region:25278-25736:1
so has part: feature:25278-25736:1:exon
subclass of: SO_0000010

position:25278:1
position: 25278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25736:1
position: 25736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25278-25736:1:exon

SOPEG_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00125
old locus tag: SOPEG_0024
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011411055.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1640 domain-containing protein
translation: MGQVAFDTQEFVETLESAGLPKDQAKAISLVVRKSHEVADLATKADIADVKRDFADLRKDFSSEITTIKRDIDDVRKDLSAEIANVRKDLSIEITTVRKDLSAEIKLRFDKADTQIALLRKDVESIATGLLLKLGGVIVLTISASTAIMKFM
SIO_010081: SOPEG_RS00125
subclass of: SO_0000673
so part of: SOPEG_RS00125
location: 25278..25736
location: region:25278-25736:1
so has part: feature:25278-25736:1:exon

WP_025243838.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25278-25736:1:exon

SOPEG_RS00130
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00130
old locus tag: SOPEG_ps0025
so part of: sequence
location: 25844..26068
location: region:25844-26068:1
so has part: feature:25844-26068:1:exon
subclass of: SO_0000010

position:25844:1
position: 25844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26068:1
position: 26068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25844-26068:1:exon

SOPEG_RS00130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00130
old locus tag: SOPEG_ps0025
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPKKLIDAAKLNQVFAHLSESADNHALYFKLVEGNDISSQIREVTLAPGYRILRALLNKSEICDDFLPIRAIVT
SIO_010081: SOPEG_RS00130
subclass of: SO_0000673
so part of: SOPEG_RS00130
location: 25844..26068
location: region:25844-26068:1
so has part: feature:25844-26068:1:exon

WP_038467962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25844-26068:1:exon

SOPEG_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00135
old locus tag: SOPEG_0026
so part of: sequence
location: complement(26061..26984)
location: region:26061-26984:-1
so has part: feature:26061-26984:-1:exon
subclass of: SO_0000010

position:26061:-1
position: 26061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26984:-1
position: 26984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26061-26984:-1:exon

SOPEG_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00135
old locus tag: SOPEG_0026
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDLTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKREFNLSLRALQGFVDAIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKIFGEGEWKVRQHGAERRRVWRKLHLAVDSATHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKTLLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS00135
subclass of: SO_0000673
so part of: SOPEG_RS00135
location: complement(26061..26984)
location: region:26061-26984:-1
so has part: feature:26061-26984:-1:exon

WP_025243839.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26061-26984:-1:exon

SOPEG_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00140
old locus tag: SOPEG_ps0027
pseudo: true
so part of: sequence
location: 27447..28364
location: region:27447-28364:1
so has part: feature:27447-28364:1:exon
subclass of: SO_0000010

position:27447:1
position: 27447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28364:1
position: 28364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27447-28364:1:exon

SOPEG_RS00140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00140
old locus tag: SOPEG_ps0027
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011411000.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
SIO_010081: SOPEG_RS00140
subclass of: SO_0000673
so part of: SOPEG_RS00140
location: 27447..28364
location: region:27447-28364:1
so has part: feature:27447-28364:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27447-28364:1:exon

SOPEG_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00150
old locus tag: SOPEG_0028
so part of: sequence
location: complement(28375..29583)
location: region:28375-29583:-1
so has part: feature:28375-29583:-1:exon
subclass of: SO_0000010

position:28375:-1
position: 28375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29583:-1
position: 29583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28375-29583:-1:exon

SOPEG_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00150
old locus tag: SOPEG_0028
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256-like element ISSoEn2 family transposase
translation: MDEKQLQALANELAKNLKTPEDLSHFDRRLKKISVEAALNAEMTHHLGYDKNQPKPGTNARNGYSTKTVTTGDGPLALRTPRDRDGSFEPQLVKKNQTRITGMDNQILSLYAKGMTTREIAAVFKELYDADVSPALVSKVTDAVMEQVVEWQNRPLDAIYPIVYLDCIVLKVRQDSRIINKSVFLALGINIEGQKELLGMWLAENEGAKFWLNVLTELKNRGLNDILIACVDGLKGFPDAINAVYPEARLQLCIVHMVRNSLRFVSWKDYKAVTRDLKAIYQAPTEEAGLQALEAFSSAWDIRYPQISRSWQANWANLATFFAYPTDIRKVIYTTNAIESLNSVIRHAIKKRKVFPTDDAVKKVVWLAIQAASQKWTMPLRDWRMAMSRFIIEFGDRLDGHF
SIO_010081: SOPEG_RS00150
subclass of: SO_0000673
so part of: SOPEG_RS00150
location: complement(28375..29583)
location: region:28375-29583:-1
so has part: feature:28375-29583:-1:exon

WP_025243842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28375-29583:-1:exon

SOPEG_RS23670
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS23670
so part of: sequence
location: 29734..30150
location: region:29734-30150:1
so has part: feature:29734-30150:1:exon
subclass of: SO_0000010

position:29734:1
position: 29734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30150:1
position: 30150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29734-30150:1:exon

SOPEG_RS23670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS23670
inference: COORDINATES: protein motif:HMM:NF014417.2
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination/antitermination NusG family protein
translation: MYSTKHHLAASGVYYFCPMIETQYRRPDSVESFRKRLSPVFPGYLFVNLGFNHCHPQKLSAHRHIYGLINFGQGPSPIDDAVIDLLMAKPHIVREIVDVPRGWKEMSELEKIMYIRDDEQRIAAFLNYMQSQHSSVAA
SIO_010081: SOPEG_RS23670
subclass of: SO_0000673
so part of: SOPEG_RS23670
location: 29734..30150
location: region:29734-30150:1
so has part: feature:29734-30150:1:exon

WP_257720400.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29734-30150:1:exon

SOPEG_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00155
old locus tag: SOPEG_ps0030
so part of: sequence
location: 30281..30970
location: region:30281-30970:1
so has part: feature:30281-30970:1:exon
subclass of: SO_0000010

position:30281:1
position: 30281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30970:1
position: 30970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30281-30970:1:exon

SOPEG_RS00155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00155
old locus tag: SOPEG_ps0030
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLNPLAGSITSVRNRSVGFDSKPSCWSFVKRTLASLLRKVVRVCQAIPEALATLASCRGRAKNCPSKPDITRTRLMTKTPRTAGILRYLDQLVKETDIRWADVNHDNPERLCDQVARRSFNRNVLTTELEGQSFNACTRMLAHLEGEYGHHLRGVLDFAAEQVGHTEEDPMKVSTAYKYPTFVEDIIIALHERLGRYDVLVEPGANIRRYSELSSKDIKALSCIGVALI
SIO_010081: SOPEG_RS00155
subclass of: SO_0000673
so part of: SOPEG_RS00155
location: 30281..30970
location: region:30281-30970:1
so has part: feature:30281-30970:1:exon

WP_148296964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30281-30970:1:exon

SOPEG_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00160
old locus tag: SOPEG_0031
so part of: sequence
location: 31018..31416
location: region:31018-31416:1
so has part: feature:31018-31416:1:exon
subclass of: SO_0000010

position:31018:1
position: 31018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31416:1
position: 31416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31018-31416:1:exon

SOPEG_RS00160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00160
old locus tag: SOPEG_0031
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011411641.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-packaging protein
translation: MGRQTKNKVGRPSELAQSLEKAKAYLLGDYENLGDVVPSIAGLACYLAVSRSSVYDWAKQSNEFSYIVEGILALQENRLINKGLQGEFNATITKLMLTKHGYSDKQELTGKDGGALQVETKPLSSLFHDDES
SIO_010081: SOPEG_RS00160
subclass of: SO_0000673
so part of: SOPEG_RS00160
location: 31018..31416
location: region:31018-31416:1
so has part: feature:31018-31416:1:exon

WP_025243844.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31018-31416:1:exon

SOPEG_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00165
old locus tag: SOPEG_ps0032
so part of: sequence
location: 31403..32773
location: region:31403-32773:1
so has part: feature:31403-32773:1:exon
subclass of: SO_0000010

position:31403:1
position: 31403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32773:1
position: 32773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31403-32773:1:exon

SOPEG_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00165
old locus tag: SOPEG_ps0032
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410612.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PBSX family phage terminase large subunit
translation: MTNLNAIFRPFIQSHRYKIAKGGRGSGKSWAIARLLVEIARRGTYRFLCAREFQASMADSVIQLIADTIQREGYLKEFEIQKAYIRHLATDSLFMFYGIKNNVTKIKSLEGIDIAWIEEAEAVTKESWDILIPTIRKPGSEIWVSFNPKNILDDTYQRFVVNPPDDICLLTVNYTDNPHFPEVLRLEMEECKCKDYDLYLHIWEGEPVADSDLAIIKPLWIAAAVDAHITLEFDAVGEKRLGFDVADEGEDCNALCFVQGSVERDLDEWHRGDVIDSFNWVNRYAIERSITCIIYDSIGVGAGVKAHLKRIAAINVKGFNAGEAVKDPDALYMPGKTNKDMFANIKAQAWWAVRERFYKTWRCIEAKKQDPKAELLYPTDELISLSTKNIKKLEYLKAELSRPRVDYDNNGRVKVESKKDMKKRGIPSPNMADALIMAFAPTDRALDTWALLGRNA
SIO_010081: SOPEG_RS00165
subclass of: SO_0000673
so part of: SOPEG_RS00165
location: 31403..32773
location: region:31403-32773:1
so has part: feature:31403-32773:1:exon

WP_038469262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31403-32773:1:exon

SOPEG_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00170
old locus tag: SOPEG_0033
pseudo: true
so part of: sequence
location: 32774..34198
location: region:32774-34198:1
so has part: feature:32774-34198:1:exon
subclass of: SO_0000010

position:32774:1
position: 32774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34198:1
position: 34198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32774-34198:1:exon

SOPEG_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00170
old locus tag: SOPEG_0033
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001683169.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF1073 domain-containing protein
SIO_010081: SOPEG_RS00170
subclass of: SO_0000673
so part of: SOPEG_RS00170
location: 32774..34198
location: region:32774-34198:1
so has part: feature:32774-34198:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32774-34198:1:exon

SOPEG_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00175
old locus tag: SOPEG_0034
so part of: sequence
location: 34200..34862
location: region:34200-34862:1
so has part: feature:34200-34862:1:exon
subclass of: SO_0000010

position:34200:1
position: 34200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34862:1
position: 34862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34200-34862:1:exon

SOPEG_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00175
old locus tag: SOPEG_0034
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011411638.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage minor head protein
translation: MAQAVGDIVNGTYDGSQISARDATQRLRQYADIISPWAETVATRMLNGVAHQEEKQWRTLSRDISAGLHHQMQHTAIGQVARSIIEQNIQWMKSIPLHAADRIADIQSQAIEAMSRGERPTAFMDAILRTGEVAKSRARLIARTEIARATQALTQARATAMGSEGYIWRTAHDPDVRHSHAHMEGKFVRWGNPPTLDGMTGHAGTLPNCRCYCDVVIPEN
SIO_010081: SOPEG_RS00175
subclass of: SO_0000673
so part of: SOPEG_RS00175
location: 34200..34862
location: region:34200-34862:1
so has part: feature:34200-34862:1:exon

WP_025243846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34200-34862:1:exon

SOPEG_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00180
old locus tag: SOPEG_0035
so part of: sequence
location: 34866..36104
location: region:34866-36104:1
so has part: feature:34866-36104:1:exon
subclass of: SO_0000010

position:34866:1
position: 34866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36104:1
position: 36104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34866-36104:1:exon

SOPEG_RS00180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00180
old locus tag: SOPEG_0035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004712501.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2213 domain-containing protein
translation: MKYFFKTRLGETRYLMADGSLLCESVPVARTGSQMYAAADIPHIEPDRTGDIDVIRTPDVVFNPASMASFEGIAVVINHPRDASGDILFIAPDNWQSLAQGHAQNIRRGTGEQVDLLLADLVIKNDAAIRAIDAGLREISCGYDADYIQTGVGKAEQINIVGNHTALVPEGRAGKRCSIGDSQSMTTKNTGWFASLRRAIKTGDSVEAEALLKNAPDNLTGDDGVETPTVILKVEGAEKTESDKPTADENETGMAERLAALETAVQSILEKLTPSSTTVDETTEEEEKETRRLTGDAAYQQDVVARAELILLGFSLPEGAKPRTLKRQVLSIACKTTDGKALLSSLTDANADFMMMPFSTVYSIFNGASEIARLRNNAKQQMPVFNLGGCTNHIAELNKTKADFWKNKGATA
SIO_010081: SOPEG_RS00180
subclass of: SO_0000673
so part of: SOPEG_RS00180
location: 34866..36104
location: region:34866-36104:1
so has part: feature:34866-36104:1:exon

WP_025243847.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34866-36104:1:exon

SOPEG_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00185
old locus tag: SOPEG_0036
so part of: sequence
location: 36101..36598
location: region:36101-36598:1
so has part: feature:36101-36598:1:exon
subclass of: SO_0000010

position:36101:1
position: 36101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36598:1
position: 36598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36101-36598:1:exon

SOPEG_RS00185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00185
old locus tag: SOPEG_0036
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011411636.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTGSSILFTPDFGYAGALTRPSHSTVEPVVMSTDKPFAGDGLMGKKVAGKFVPISEGDAVTVFFGIRVRSYPFMSDSDLARQLTTPYNHTGDALTRGYIAVKVNAGTVTDNAPVFVRVKAGTKDKPIGGFEAEADKTEGNTVALANARFIGAADANGIAEVAFNI
SIO_010081: SOPEG_RS00185
subclass of: SO_0000673
so part of: SOPEG_RS00185
location: 36101..36598
location: region:36101-36598:1
so has part: feature:36101-36598:1:exon

WP_025243848.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36101-36598:1:exon

SOPEG_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00190
old locus tag: SOPEG_ps0037
pseudo: true
so part of: sequence
location: 36613..37566
location: region:36613-37566:1
so has part: feature:36613-37566:1:exon
subclass of: SO_0000010

position:36613:1
position: 36613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37566:1
position: 37566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36613-37566:1:exon

SOPEG_RS00190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00190
old locus tag: SOPEG_ps0037
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011411635.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF2184 domain-containing protein
SIO_010081: SOPEG_RS00190
subclass of: SO_0000673
so part of: SOPEG_RS00190
location: 36613..37566
location: region:36613-37566:1
so has part: feature:36613-37566:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36613-37566:1:exon

SOPEG_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00195
old locus tag: SOPEG_0038
so part of: sequence
location: 37582..37986
location: region:37582-37986:1
so has part: feature:37582-37986:1:exon
subclass of: SO_0000010

position:37582:1
position: 37582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37986:1
position: 37986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37582-37986:1:exon

SOPEG_RS00195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00195
old locus tag: SOPEG_0038
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016244735.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4054 domain-containing protein
translation: MMANPSMPTIETFRADFPVFADPLRYPDTQIRIRLDLADTLLDEKRLGKLFVYLVELFVAHYLTLFAADNRSAVIGGAGGANSGVVSSKSVDKVSVSYDNSATLNPSAGFWNNTRYGAEFYQYLCLLGAGGQQL
SIO_010081: SOPEG_RS00195
subclass of: SO_0000673
so part of: SOPEG_RS00195
location: 37582..37986
location: region:37582-37986:1
so has part: feature:37582-37986:1:exon

WP_200867877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37582-37986:1:exon

SOPEG_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00200
old locus tag: SOPEG_ps0039
pseudo: true
so part of: sequence
location: 37983..38526
location: region:37983-38526:1
so has part: feature:37983-38526:1:exon
subclass of: SO_0000010

position:37983:1
position: 37983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38526:1
position: 38526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37983-38526:1:exon

SOPEG_RS00200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00200
old locus tag: SOPEG_ps0039
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011411633.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: SOPEG_RS00200
subclass of: SO_0000673
so part of: SOPEG_RS00200
location: 37983..38526
location: region:37983-38526:1
so has part: feature:37983-38526:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:37983-38526:1:exon

SOPEG_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00205
old locus tag: SOPEG_0040
so part of: sequence
location: 38513..38902
location: region:38513-38902:1
so has part: feature:38513-38902:1:exon
subclass of: SO_0000010

position:38513:1
position: 38513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38902:1
position: 38902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38513-38902:1:exon

SOPEG_RS00205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00205
old locus tag: SOPEG_0040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001687820.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPDLDVTDVLFDPDFCDTTLTVTRRLRSVDDDGFRHNTHTTTRFSGVVTVDKSLESRRMEAGILISGAILILTTERLTQGQTARDADIVTYQGRDYRVTFVDPYTAYGAGFVQAHCELLPFDGGTPIEQ
SIO_010081: SOPEG_RS00205
subclass of: SO_0000673
so part of: SOPEG_RS00205
location: 38513..38902
location: region:38513-38902:1
so has part: feature:38513-38902:1:exon

WP_025243850.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38513-38902:1:exon

SOPEG_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00210
old locus tag: SOPEG_0041
so part of: sequence
location: 38877..39440
location: region:38877-39440:1
so has part: feature:38877-39440:1:exon
subclass of: SO_0000010

position:38877:1
position: 38877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39440:1
position: 39440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38877-39440:1:exon

SOPEG_RS00210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00210
old locus tag: SOPEG_0041
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014640936.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEVLRLSNNTSTERGWLTPNGSDPVYDKELDKLLSQWVRNITLLTAKRVIARWQPEPPDIPPADVNWCAFGVVDMPCDDNPAFVNQTEENTELWRHEAIECLASFYGPAGQQYATRFRDGITVSQNNAELNTQGLSLAGYSTIIPFPELINTQWVRRYDFTVRLRRKVVREYNIRSLIDAPFTLSGE
SIO_010081: SOPEG_RS00210
subclass of: SO_0000673
so part of: SOPEG_RS00210
location: 38877..39440
location: region:38877-39440:1
so has part: feature:38877-39440:1:exon

WP_038467966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38877-39440:1:exon

SOPEG_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00215
old locus tag: SOPEG_0042
so part of: sequence
location: 39444..40922
location: region:39444-40922:1
so has part: feature:39444-40922:1:exon
subclass of: SO_0000010

position:39444:1
position: 39444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40922:1
position: 40922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39444-40922:1:exon

SOPEG_RS00215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00215
old locus tag: SOPEG_0042
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011411485.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3383 domain-containing protein
translation: MSQGLPVSRVVNVTVDMSPRAASARNFGALLIMGTSSVIDPLERLRTYSSIEEVATDFGTDASEYQAASLYYQQSPRPVDLFIGRWVNEASAGLLRGAILTAEQVKISHFTGVTDGAMKITVNGKTVTIKGVDLSGETNLNGVAQRIAEKINTATVLWDASNSRFVVTSSTAGKSSTVGFATAPDSGTDLSPLTGLSQAAGAAPVAGMDGETAAQAVATLADFSSAWYGLIVAANLSADDITAIAAFIGASNTSRIFGLTTQDTAAIDATRTDDIASQLKQGMYGRVFTQYSSTSPYAAASAFGRAFTVNFGANTTTLTLKFKQEPGIQAELLRTSQADALAAKNCNVFVRYDNDTAILQEGVMANGDFFDERHGLDWLQNYVQNNLYNLLYTSTIKVPQTDAGGTRLLASVEQSMAQAVNNGLIAPGVWNGGAVGQLSLGDTLTKGYYAFIQPMTEQAQADREKRKAPPIQVACKLAGAVHFADVLITVVR
SIO_010081: SOPEG_RS00215
subclass of: SO_0000673
so part of: SOPEG_RS00215
location: 39444..40922
location: region:39444-40922:1
so has part: feature:39444-40922:1:exon

WP_025243852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39444-40922:1:exon

SOPEG_RS00220
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00220
old locus tag: SOPEG_ps0043
pseudo: true
so part of: sequence
location: 40935..41375
location: region:40935-41375:1
so has part: feature:40935-41375:1:exon
subclass of: SO_0000010

position:40935:1
position: 40935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41375:1
position: 41375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40935-41375:1:exon

SOPEG_RS00220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00220
old locus tag: SOPEG_ps0043
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005226575.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF3277 family protein
SIO_010081: SOPEG_RS00220
subclass of: SO_0000673
so part of: SOPEG_RS00220
location: 40935..41375
location: region:40935-41375:1
so has part: feature:40935-41375:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40935-41375:1:exon

SOPEG_RS00225
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00225
old locus tag: SOPEG_0044
so part of: sequence
location: 41379..41786
location: region:41379-41786:1
so has part: feature:41379-41786:1:exon
subclass of: SO_0000010

position:41379:1
position: 41379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41786:1
position: 41786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41379-41786:1:exon

SOPEG_RS00225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00225
old locus tag: SOPEG_0044
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006118371.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEIELKGHFYRAGKLSVFDQLKVARKLLPVLSGMVGELQKLRGGEAAMETLLPALITAIGDMQDSDCDAIIHACLSVVSRQNGKAWVAVFRQGDLMFDDIDLGTLLQLVAQVIGDSLGNFFHAPLDGATVPPQPV
SIO_010081: SOPEG_RS00225
subclass of: SO_0000673
so part of: SOPEG_RS00225
location: 41379..41786
location: region:41379-41786:1
so has part: feature:41379-41786:1:exon

WP_025243853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41379-41786:1:exon

SOPEG_RS28995
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS28995
so part of: sequence
location: 41831..41974
location: region:41831-41974:1
so has part: feature:41831-41974:1:exon
subclass of: SO_0000010

position:41831:1
position: 41831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41974:1
position: 41974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41831-41974:1:exon

SOPEG_RS28995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS28995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001117695.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase
translation: MREFHIDQKHLDSGAVDLCRIALLNDYLDMSADNEARIARWREANRG
SIO_010081: SOPEG_RS28995
subclass of: SO_0000673
so part of: SOPEG_RS28995
location: 41831..41974
location: region:41831-41974:1
so has part: feature:41831-41974:1:exon

WP_148296965.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41831-41974:1:exon

SOPEG_RS22315
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS22315
pseudo: true
so part of: sequence
location: 42033..43855
location: region:42033-43855:1
so has part: feature:42033-43855:1:exon
subclass of: SO_0000010

position:42033:1
position: 42033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43855:1
position: 43855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42033-43855:1:exon

SOPEG_RS22315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS22315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000990887.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: lytic transglycosylase catalytic
SIO_010081: SOPEG_RS22315
subclass of: SO_0000673
so part of: SOPEG_RS22315
location: 42033..43855
location: region:42033-43855:1
so has part: feature:42033-43855:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42033-43855:1:exon

SOPEG_RS00240
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00240
old locus tag: SOPEG_0046
so part of: sequence
location: 43855..44433
location: region:43855-44433:1
so has part: feature:43855-44433:1:exon
subclass of: SO_0000010

position:44433:1
position: 44433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43855-44433:1:exon

SOPEG_RS00240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00240
old locus tag: SOPEG_0046
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011411213.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDILSTLFSQPSRKIGLLVPDMVISEKHQDQLEITEHPVEIGAEIADHAYKRPAELTMEVGFAGGGSLLDLWDTAKIGLSLGQSPRETYQKLLELQASRQPFDVITGKRQYSNMLIRAIEVTTDKASENVLMAVLTLRELNMTRTETATVTRQANMQEGATTAGVANTGVKTTKPVENVSFLQRGAEIVNGD
SIO_010081: SOPEG_RS00240
subclass of: SO_0000673
so part of: SOPEG_RS00240
location: 43855..44433
location: region:43855-44433:1
so has part: feature:43855-44433:1:exon

WP_025243857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43855-44433:1:exon

SOPEG_RS00245
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00245
old locus tag: SOPEG_0047
so part of: sequence
location: 44423..44722
location: region:44423-44722:1
so has part: feature:44423-44722:1:exon
subclass of: SO_0000010

position:44423:1
position: 44423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44722:1
position: 44722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44423-44722:1:exon

SOPEG_RS00245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00245
old locus tag: SOPEG_0047
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016192277.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVINEIPLTATNQQFSITLSGTVWQMRIIWRDVAGWVLDMCNSASEPVIAGILLRGGEDLLSQYGWLKPGGRLIVIEDDKQSLDAAGLDKTAKLYWITD
SIO_010081: SOPEG_RS00245
subclass of: SO_0000673
so part of: SOPEG_RS00245
location: 44423..44722
location: region:44423-44722:1
so has part: feature:44423-44722:1:exon

WP_025243858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44423-44722:1:exon

SOPEG_RS00250
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00250
so part of: sequence
location: 44755..45330
location: region:44755-45330:1
so has part: feature:44755-45330:1:exon
subclass of: SO_0000010

position:44755:1
position: 44755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45330:1
position: 45330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44755-45330:1:exon

SOPEG_RS00250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00250
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPQNWIRQCSLIVADEKGEGIELSAFRTTFSISWPDTRWPRTAVFKVWNLKPETANRIQAGEFARVQLMAGYQDNTGLIFTGNIRYSLTGRDNPTDTFVIIQAVDAHDAYDYATLNTILGAGHTQAEQHQTLLTGLAPYGIVKGTTPDFETLYTILCKCLFSEVTVQAVTELDNKAAHCHAPVPQRYCPFL
SIO_010081: SOPEG_RS00250
subclass of: SO_0000673
so part of: SOPEG_RS00250
location: 44755..45330
location: region:44755-45330:1
so has part: feature:44755-45330:1:exon

WP_025243859.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44755-45330:1:exon

SOPEG_RS00255
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00255
old locus tag: SOPEG_ps0049
pseudo: true
so part of: sequence
location: complement(45238..46447)
location: region:45238-46447:-1
so has part: feature:45238-46447:-1:exon
subclass of: SO_0000010

position:45238:-1
position: 45238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46447:-1
position: 46447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45238-46447:-1:exon

SOPEG_RS00255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00255
old locus tag: SOPEG_ps0049
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS256-like element ISSoEn2 family transposase
SIO_010081: SOPEG_RS00255
subclass of: SO_0000673
so part of: SOPEG_RS00255
location: complement(45238..46447)
location: region:45238-46447:-1
so has part: feature:45238-46447:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:45238-46447:-1:exon

SOPEG_RS00260
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: istB
locus tag: SOPEG_RS00260
old locus tag: SOPEG_0050
so part of: sequence
location: complement(46724..47473)
location: region:46724-47473:-1
so has part: feature:46724-47473:-1:exon
subclass of: SO_0000010

position:46724:-1
position: 46724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47473:-1
position: 47473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46724-47473:-1:exon

SOPEG_RS00260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: istB
locus tag: SOPEG_RS00260
old locus tag: SOPEG_0050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025245096.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element ISSoEn3 family helper ATPase IstB
translation: MDTLLMALRELKLSAMVQALETQRELPGSYGGLGFEERLSLMVEAENLHRKNNHICRLRRQSQMRLQAKPEDIRYILSRGVTPEQMRDLLGGQYLKYQKSILITGPTGTGKTWLSCALGEQACRQQYSVRYWRVGRLLAHLHQCQVDGTYLKQLKQLEKIELLILDDVGLESISPMQATMLLEVMEDRYDKSSSILISQLPVKKWYGLIENPTTADALLDRLVHPSYRLELKGESLRKEHGVASTGKID
SIO_010081: SOPEG_RS00260
subclass of: SO_0000673
so part of: SOPEG_RS00260
location: complement(46724..47473)
location: region:46724-47473:-1
so has part: feature:46724-47473:-1:exon

WP_025243860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46724-47473:-1:exon

SOPEG_RS00265
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: istA
locus tag: SOPEG_RS00265
old locus tag: SOPEG_ps0051
pseudo: true
so part of: sequence
location: complement(47485..49034)
location: region:47485-49034:-1
so has part: feature:47485-49034:-1:exon
subclass of: SO_0000010

position:47485:-1
position: 47485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49034:-1
position: 49034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47485-49034:-1:exon

SOPEG_RS00265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: istA
locus tag: SOPEG_RS00265
old locus tag: SOPEG_ps0051
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025245097.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21-like element ISSoEn3 family transposase
SIO_010081: SOPEG_RS00265
subclass of: SO_0000673
so part of: SOPEG_RS00265
location: complement(47485..49034)
location: region:47485-49034:-1
so has part: feature:47485-49034:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47485-49034:-1:exon

SOPEG_RS00270
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00270
old locus tag: SOPEG_ps0052
pseudo: true
so part of: sequence
location: <49180..49839
location: region:49180-49839:1
so has part: feature:49180-49839:1:exon
subclass of: SO_0000010

position:49180:1
position: 49180
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:49839:1
position: 49839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49180-49839:1:exon

SOPEG_RS00270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00270
old locus tag: SOPEG_ps0052
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS256 family transposase
SIO_010081: SOPEG_RS00270
subclass of: SO_0000673
so part of: SOPEG_RS00270
location: <49180..49839
location: region:49180-49839:1
so has part: feature:49180-49839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49180-49839:1:exon

SOPEG_RS23685
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS23685
so part of: sequence
location: 49905..50330
location: region:49905-50330:1
so has part: feature:49905-50330:1:exon
subclass of: SO_0000010

position:49905:1
position: 49905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50330:1
position: 50330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49905-50330:1:exon

SOPEG_RS23685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS23685
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004157634.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail protein
translation: MTTGGSDSVKLTVDNLPAHNHTFSANTSSFDYGNKETNWFDYGEKGTDVNGGHTHTIDGKNAEGRDTQLSFMSRTNSQTASKSTSGAGEHSHTVNIGGHRHSVGIGAHSHSVSGATKNTGSSAELAVTNAYIKLMGWYRVS
SIO_010081: SOPEG_RS23685
subclass of: SO_0000673
so part of: SOPEG_RS23685
location: 49905..50330
location: region:49905-50330:1
so has part: feature:49905-50330:1:exon

WP_071882101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49905-50330:1:exon

SOPEG_RS00275
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00275
old locus tag: SOPEG_ps0054
so part of: sequence
location: complement(50379..51491)
location: region:50379-51491:-1
so has part: feature:50379-51491:-1:exon
subclass of: SO_0000010

position:50379:-1
position: 50379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51491:-1
position: 51491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50379-51491:-1:exon

SOPEG_RS00275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00275
old locus tag: SOPEG_ps0054
EC number: 2.3.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001042221.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyltransferase
translation: MSQRLKTMQVLRGIAAISVLFFHYRFYLKGNDTSGSSLWDILFGWGIIGVDIFFVISGFIMVYIIHYYYHGWRSSTRFLLNRATRVIPLYYFCLLVAFLLGGAMSTFHYPEKTQNLFSALTFTVYKTNITPHYIDDDEIYNIRWTLNYEIYFYIVFALCMLVKPRLITLLIYGLLVTCIIPVFLGFQPTLSSQGYKFQTAIYGLLSNPIILEFYIGAIIGYLYISLKKQKLSFNLESTSLFISCILLIFIPYGVCSGKISALNFYSTIIISFFILAITLAEPLISNKIPNNIVYLGDISFSLYLLHNSIGMSIMKRIDTSHNNSIISWLVVLMAITASVIAAHFTHKYIEVKFTSWLKQKCATQIANTKI
SIO_010081: SOPEG_RS00275
subclass of: SO_0000673
so part of: SOPEG_RS00275
location: complement(50379..51491)
location: region:50379-51491:-1
so has part: feature:50379-51491:-1:exon

WP_025243862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50379-51491:-1:exon

SOPEG_RS00280
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00280
old locus tag: SOPEG_ps0055
so part of: sequence
location: complement(51589..52539)
location: region:51589-52539:-1
so has part: feature:51589-52539:-1:exon
subclass of: SO_0000010

position:51589:-1
position: 51589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52539:-1
position: 52539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51589-52539:-1:exon

SOPEG_RS00280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00280
old locus tag: SOPEG_ps0055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410629.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MTKSSLSQHDALFKKFLGDIAVARDFLEIHLPEHLRKRCDFSTLAMESGSFIEGDLKNQCSDMLYSMKTTTGHDGYVYCLIEHQSGPEKLMAFRLLWYAVAAMQRHLEQGNDQLPVVIPLLFYHGRTSPYPYTTRWLDCFADPELAESVYRQAFPLVDITAMPDDEILSHRRIALLELVQKHIRTRNMLELAADIARLLNLWAIPKEQFRSLMYYIAERGNTSDESRFLQHIATKATDYREDIMTIAEQLEAKGEQRGIQKGIQQGMQLGEQKGIEKGEKLASLKIARQLLANGAERNLIKIAIGLSDHELNELAR
SIO_010081: SOPEG_RS00280
subclass of: SO_0000673
so part of: SOPEG_RS00280
location: complement(51589..52539)
location: region:51589-52539:-1
so has part: feature:51589-52539:-1:exon

WP_025243863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51589-52539:-1:exon

SOPEG_RS29000
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS29000
pseudo: true
so part of: sequence
location: complement(<53019..>53321)
location: region:53019-53321:-1
so has part: feature:53019-53321:-1:exon
subclass of: SO_0000010

position:53019:-1
position: 53019
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:53321:-1
position: 53321
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53019-53321:-1:exon

SOPEG_RS29000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS29000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000887681.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Rha family transcriptional regulator
SIO_010081: SOPEG_RS29000
subclass of: SO_0000673
so part of: SOPEG_RS29000
location: complement(<53019..>53321)
location: region:53019-53321:-1
so has part: feature:53019-53321:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53019-53321:-1:exon

SOPEG_RS00290
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00290
old locus tag: SOPEG_0057
so part of: sequence
location: 53695..54618
location: region:53695-54618:1
so has part: feature:53695-54618:1:exon
subclass of: SO_0000010

position:53695:1
position: 53695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54618:1
position: 54618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53695-54618:1:exon

SOPEG_RS00290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00290
old locus tag: SOPEG_0057
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDLTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDSIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKVFGEGEWKVRQHGAERRRVWRKLHLAVDSVTHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKTLLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS00290
subclass of: SO_0000673
so part of: SOPEG_RS00290
location: 53695..54618
location: region:53695-54618:1
so has part: feature:53695-54618:1:exon

WP_025243865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53695-54618:1:exon

SOPEG_RS00295
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00295
old locus tag: SOPEG_ps0059
so part of: sequence
location: 55253..55552
location: region:55253-55552:1
so has part: feature:55253-55552:1:exon
subclass of: SO_0000010

position:55253:1
position: 55253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55552:1
position: 55552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55253-55552:1:exon

SOPEG_RS00295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00295
old locus tag: SOPEG_ps0059
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010281963.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDQQSSNIVTQFFAWLAAIASAAGISTQDLIYIAFGAIGVIVSILSFVLGRIDARAKRRQDTRRTALYENYLNIRIARDDLKNSEILQHMNHSGGEQKT
SIO_010081: SOPEG_RS00295
subclass of: SO_0000673
so part of: SOPEG_RS00295
location: 55253..55552
location: region:55253-55552:1
so has part: feature:55253-55552:1:exon

WP_038469271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55253-55552:1:exon

SOPEG_RS00300
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00300
old locus tag: SOPEG_0060
so part of: sequence
location: 55549..56067
location: region:55549-56067:1
so has part: feature:55549-56067:1:exon
subclass of: SO_0000010

position:55549:1
position: 55549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56067:1
position: 56067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55549-56067:1:exon

SOPEG_RS00300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00300
old locus tag: SOPEG_0060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011147596.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysozyme
translation: MSRLSKAVITLIISGASAAVILPQFLNEKEANHIKAYKDSGGVWTICRGLTNIDGKPVNANMKFSTAQCEAFNKQEEANALAWVERNVQVQLSEPQKAAVASFCYWNIGSGKCQGSTFWRKLNAGDRKGACAELNRWVFDGGKDCRLTKGMKHGCYGQIERRKQEEELCLAN
SIO_010081: SOPEG_RS00300
subclass of: SO_0000673
so part of: SOPEG_RS00300
location: 55549..56067
location: region:55549-56067:1
so has part: feature:55549-56067:1:exon

WP_025243867.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55549-56067:1:exon

SOPEG_RS00305
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00305
so part of: sequence
location: 56052..56429
location: region:56052-56429:1
so has part: feature:56052-56429:1:exon
subclass of: SO_0000010

position:56052:1
position: 56052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56429:1
position: 56429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56052-56429:1:exon

SOPEG_RS00305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019456262.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLSKLMANSIMFFFALSALIGTGVWLAGRHYQLTIDKLNETLALCRTSKHQQAATIEIQNAGIEALRRVEAEHQAKAEAEQKKALNEARYNYSKANAVLSERTIGDVCLAAAKAFDDELRRERAK
SIO_010081: SOPEG_RS00305
subclass of: SO_0000673
so part of: SOPEG_RS00305
location: 56052..56429
location: region:56052-56429:1
so has part: feature:56052-56429:1:exon

WP_025243868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56052-56429:1:exon

SOPEG_RS00315
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rsmB
locus tag: SOPEG_RS00315
old locus tag: SOPEG_0061
so part of: sequence
location: 56871..58172
location: region:56871-58172:1
so has part: feature:56871-58172:1:exon
subclass of: SO_0000010

position:56871:1
position: 56871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58172:1
position: 58172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56871-58172:1:exon

SOPEG_RS00315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rsmB
locus tag: SOPEG_RS00315
old locus tag: SOPEG_0061
EC number: 2.1.1.176
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412059.1
GO function: GO:0003723 - RNA binding [Evidence IEA]; GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0001510 - RNA methylation [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
translation: MKTHYNLRVIAAKAVAQVLDQGQSLGALLPPLQASLNEKDRALLQELCFGIMRVLPQLEWILRQLMEKPLTGKQRPVHYLLMVGLYQLIYTRIPAHAALAETVEGAVALKRPPLKGLINGVLRQFQRQQAALLAEAAQLDIRHLHPSWLQKRILAAWPAQYAQIIDANNQRPPMWLRVNRRHHSRDAYLALLADAAIAAVAHPQLPDAIKLEVPCNVGRLPGFDRGWVTVQDASAQDCALLLAPQDGETILDLCAAPGGKTTHLLEIAPAARVTAVDVDGQRAARIHDNLQRLGMQAEIIIGDGRTPEDWCDNRLFNRILLDAPCSATGVIRRHPDIKWLRRDGDIAELAELQRQILHAAWRTLKPGGTLLYATCSILPEENRGQIATFLAGHPDARLQETGDAAAPGLQCLPSPASGDGFFYAKMIKGTQVP
SIO_010081: SOPEG_RS00315
subclass of: SO_0000673
so part of: SOPEG_RS00315
location: 56871..58172
location: region:56871-58172:1
so has part: feature:56871-58172:1:exon

WP_025243869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56871-58172:1:exon

SOPEG_RS00320
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: trkA
locus tag: SOPEG_RS00320
old locus tag: SOPEG_ps0062
pseudo: true
so part of: sequence
location: 58274..59650
location: region:58274-59650:1
so has part: feature:58274-59650:1:exon
subclass of: SO_0000010

position:58274:1
position: 58274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59650:1
position: 59650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58274-59650:1:exon

SOPEG_RS00320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: trkA
locus tag: SOPEG_RS00320
old locus tag: SOPEG_ps0062
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015079 - potassium ion transmembrane transporter activity [Evidence IEA]
GO process: GO:0006813 - potassium ion transport [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Trk system potassium transporter TrkA
SIO_010081: SOPEG_RS00320
subclass of: SO_0000673
so part of: SOPEG_RS00320
location: 58274..59650
location: region:58274-59650:1
so has part: feature:58274-59650:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:58274-59650:1:exon

SOPEG_RS00325
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: mscL
locus tag: SOPEG_RS00325
old locus tag: SOPEG_ps0063
so part of: sequence
location: 59781..60209
location: region:59781-60209:1
so has part: feature:59781-60209:1:exon
subclass of: SO_0000010

position:59781:1
position: 59781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60209:1
position: 60209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59781-60209:1:exon

SOPEG_RS00325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: mscL
locus tag: SOPEG_RS00325
old locus tag: SOPEG_ps0063
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006120604.1
GO function: GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
GO process: GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: large-conductance mechanosensitive channel protein MscL
translation: MRGNVVDLAVGIIIGAAFGKIVSSLVANVIMPPLGLLIGEIDFKQFSWVLKPAQGDTPAVVMEYGIFLQNIFDFIIVAFAVFCIIKLINRMHRKEAEKPAEPPKPSAEETLLTEIRDLLKQQNNAVAPGTTTISGQTPPPKL
SIO_010081: SOPEG_RS00325
subclass of: SO_0000673
so part of: SOPEG_RS00325
location: 59781..60209
location: region:59781-60209:1
so has part: feature:59781-60209:1:exon

WP_081742882.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59781-60209:1:exon

SOPEG_RS00330
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00330
old locus tag: SOPEG_0064
so part of: sequence
location: complement(60215..60463)
location: region:60215-60463:-1
so has part: feature:60215-60463:-1:exon
subclass of: SO_0000010

position:60215:-1
position: 60215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60463:-1
position: 60463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60215-60463:-1:exon

SOPEG_RS00330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00330
old locus tag: SOPEG_0064
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012768124.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alternative ribosome-rescue factor A
translation: MKENYRHTKGTIHDNALAALLYDPLFRQRRAKNKKGKGSYNRKHQQGKNWEASGKRIIDTVATGFLVCCRTASGLTFSAAAR
SIO_010081: SOPEG_RS00330
subclass of: SO_0000673
so part of: SOPEG_RS00330
location: complement(60215..60463)
location: region:60215-60463:-1
so has part: feature:60215-60463:-1:exon

WP_025243870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60215-60463:-1:exon

SOPEG_RS00335
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00335
old locus tag: SOPEG_0065
so part of: sequence
location: complement(60508..60876)
location: region:60508-60876:-1
so has part: feature:60508-60876:-1:exon
subclass of: SO_0000010

position:60508:-1
position: 60508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60876:-1
position: 60876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60508-60876:-1:exon

SOPEG_RS00335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00335
old locus tag: SOPEG_0065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004929724.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1992 domain-containing protein
translation: MGIVDDWAERHIQQAQQAGEFDALPGYGKPQQLDDDSAVPETLRTGYRLLKNAGYLPAELQDRKEALQLADLLHTLCEDDPRFAPLDARLRLLEMKLRQSGLSTDFLHQHYQQQLRARFART
SIO_010081: SOPEG_RS00335
subclass of: SO_0000673
so part of: SOPEG_RS00335
location: complement(60508..60876)
location: region:60508-60876:-1
so has part: feature:60508-60876:-1:exon

WP_025243871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60508-60876:-1:exon

SOPEG_RS00345
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: fhuE
locus tag: SOPEG_RS00345
old locus tag: SOPEG_ps0066
pseudo: true
so part of: sequence
location: 61364..63560
location: region:61364-63560:1
so has part: feature:61364-63560:1:exon
subclass of: SO_0000010

position:61364:1
position: 61364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63560:1
position: 63560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61364-63560:1:exon

SOPEG_RS00345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: fhuE
locus tag: SOPEG_RS00345
old locus tag: SOPEG_ps0066
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007670675.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
GO function: GO:0015344 - siderophore uptake transmembrane transporter activity [Evidence IEA]; GO:0038023 - signaling receptor activity [Evidence IEA]
GO process: GO:0015891 - siderophore transport [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ferric-rhodotorulic acid/ferric-coprogen receptor FhuE
SIO_010081: SOPEG_RS00345
subclass of: SO_0000673
so part of: SOPEG_RS00345
location: 61364..63560
location: region:61364-63560:1
so has part: feature:61364-63560:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:61364-63560:1:exon

SOPEG_RS00355
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00355
old locus tag: SOPEG_ps0067
pseudo: true
so part of: sequence
location: complement(63799..65008)
location: region:63799-65008:-1
so has part: feature:63799-65008:-1:exon
subclass of: SO_0000010

position:63799:-1
position: 63799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65008:-1
position: 65008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63799-65008:-1:exon

SOPEG_RS00355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00355
old locus tag: SOPEG_ps0067
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS256-like element ISSoEn2 family transposase
SIO_010081: SOPEG_RS00355
subclass of: SO_0000673
so part of: SOPEG_RS00355
location: complement(63799..65008)
location: region:63799-65008:-1
so has part: feature:63799-65008:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:63799-65008:-1:exon

SOPEG_RS23695
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS23695
old locus tag: SOPEG_ps0068
pseudo: true
so part of: sequence
location: complement(65109..66033)
location: region:65109-66033:-1
so has part: feature:65109-66033:-1:exon
subclass of: SO_0000010

position:65109:-1
position: 65109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66033:-1
position: 66033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65109-66033:-1:exon

SOPEG_RS23695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS23695
old locus tag: SOPEG_ps0068
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
SIO_010081: SOPEG_RS23695
subclass of: SO_0000673
so part of: SOPEG_RS23695
location: complement(65109..66033)
location: region:65109-66033:-1
so has part: feature:65109-66033:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65109-66033:-1:exon

SOPEG_RS00365
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00365
so part of: sequence
location: complement(66098..66643)
location: region:66098-66643:-1
so has part: feature:66098-66643:-1:exon
subclass of: SO_0000010

position:66098:-1
position: 66098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66643:-1
position: 66643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66098-66643:-1:exon

SOPEG_RS00365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00365
inference: COORDINATES: protein motif:HMM:NF024206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MIAISSGIDDDMLMTLFAFVEPRGLNVNLYDADGHSAMTKAIIFTPGTAVVKKIIDMGFKVDDFTTLSYLQKRRLPGADNFMNYHQYQYTPLYFAIERNDYDKVKLLLDKGANGNGFSLWDVNFRGARKQITPLRLAEKLGHKDIVNLLMDRGFNDSRSSSRWNSSDSDESGTVSLSDRLC
SIO_010081: SOPEG_RS00365
subclass of: SO_0000673
so part of: SOPEG_RS00365
location: complement(66098..66643)
location: region:66098-66643:-1
so has part: feature:66098-66643:-1:exon

WP_025243872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66098-66643:-1:exon

SOPEG_RS00370
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00370
so part of: sequence
location: complement(66666..67082)
location: region:66666-67082:-1
so has part: feature:66666-67082:-1:exon
subclass of: SO_0000010

position:66666:-1
position: 66666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67082:-1
position: 67082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66666-67082:-1:exon

SOPEG_RS00370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00370
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMPISSISSSLSHYPFATSASSAYLVADLKNRIVTGDHNAFIAALENAKAADISIDVEIDSDKNTLLMYALRKGRYHIATHLLEMGTDHKITDDDGNTVLMLLFSHYATDADLSEATRQAFLELSGKLIKQRGGYQQG
SIO_010081: SOPEG_RS00370
subclass of: SO_0000673
so part of: SOPEG_RS00370
location: complement(66666..67082)
location: region:66666-67082:-1
so has part: feature:66666-67082:-1:exon

WP_148296966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66666-67082:-1:exon

SOPEG_RS00375
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rplQ
locus tag: SOPEG_RS00375
old locus tag: SOPEG_0070
so part of: sequence
location: complement(67574..67969)
location: region:67574-67969:-1
so has part: feature:67574-67969:-1:exon
subclass of: SO_0000010

position:67574:-1
position: 67574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67969:-1
position: 67969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67574-67969:-1:exon

SOPEG_RS00375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rplQ
locus tag: SOPEG_RS00375
old locus tag: SOPEG_0070
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229143.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L17
translation: MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRAEATAPAAKATAE
SIO_010081: SOPEG_RS00375
subclass of: SO_0000673
so part of: SOPEG_RS00375
location: complement(67574..67969)
location: region:67574-67969:-1
so has part: feature:67574-67969:-1:exon

WP_025243874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67574-67969:-1:exon

SOPEG_RS00380
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rpoA
locus tag: SOPEG_RS00380
old locus tag: SOPEG_0071
pseudo: true
so part of: sequence
location: complement(68010..69000)
location: region:68010-69000:-1
so has part: feature:68010-69000:-1:exon
subclass of: SO_0000010

position:68010:-1
position: 68010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69000:-1
position: 69000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68010-69000:-1:exon

SOPEG_RS00380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rpoA
locus tag: SOPEG_RS00380
old locus tag: SOPEG_0071
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit alpha
SIO_010081: SOPEG_RS00380
subclass of: SO_0000673
so part of: SOPEG_RS00380
location: complement(68010..69000)
location: region:68010-69000:-1
so has part: feature:68010-69000:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:68010-69000:-1:exon

SOPEG_RS00385
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rpsD
locus tag: SOPEG_RS00385
old locus tag: SOPEG_0072
so part of: sequence
location: complement(69026..69646)
location: region:69026-69646:-1
so has part: feature:69026-69646:-1:exon
subclass of: SO_0000010

position:69026:-1
position: 69026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69646:-1
position: 69646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69026-69646:-1:exon

SOPEG_RS00385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rpsD
locus tag: SOPEG_RS00385
old locus tag: SOPEG_0072
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1
GO component: GO:0015935 - small ribosomal subunit [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S4
translation: MARYLGPKLKLSRREGTDLFLKSGVHAIDSKCKIEQPPGQHGARKPRLSDYGVQLREKQKVRRIYGVLERQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAESRQLVSHKAIMVNGRVVNIASYQVTPNDVVSIREKAKKQSRVRASLELAEQREKPTWLEVDAAKMEGVFKRIPERTDLSADINEHLIVELYSK
SIO_010081: SOPEG_RS00385
subclass of: SO_0000673
so part of: SOPEG_RS00385
location: complement(69026..69646)
location: region:69026-69646:-1
so has part: feature:69026-69646:-1:exon

WP_025243875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69026-69646:-1:exon

SOPEG_RS00390
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rpsK
locus tag: SOPEG_RS00390
old locus tag: SOPEG_0073
so part of: sequence
location: complement(69677..70066)
location: region:69677-70066:-1
so has part: feature:69677-70066:-1:exon
subclass of: SO_0000010

position:69677:-1
position: 69677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70066:-1
position: 70066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69677-70066:-1:exon

SOPEG_RS00390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rpsK
locus tag: SOPEG_RS00390
old locus tag: SOPEG_0073
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S11
translation: MAKAPIRARKRVKKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPFAAQVAAERCAEAVKEYGIKNLEVMVKGPGPGRESTVRALNAVGFRITNITDVTPIPHNGCRPPKKRRV
SIO_010081: SOPEG_RS00390
subclass of: SO_0000673
so part of: SOPEG_RS00390
location: complement(69677..70066)
location: region:69677-70066:-1
so has part: feature:69677-70066:-1:exon

WP_025243876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69677-70066:-1:exon

SOPEG_RS00395
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rpsM
locus tag: SOPEG_RS00395
old locus tag: SOPEG_0074
so part of: sequence
location: complement(70083..70439)
location: region:70083-70439:-1
so has part: feature:70083-70439:-1:exon
subclass of: SO_0000010

position:70083:-1
position: 70083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70439:-1
position: 70439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70083-70439:-1:exon

SOPEG_RS00395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rpsM
locus tag: SOPEG_RS00395
old locus tag: SOPEG_0074
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S13
translation: MARIAGINIPDHKHTVIALTSIYGIGKTRSQHICAATSIAENVKISELSEEQIDTLRDAVAKFVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK
SIO_010081: SOPEG_RS00395
subclass of: SO_0000673
so part of: SOPEG_RS00395
location: complement(70083..70439)
location: region:70083-70439:-1
so has part: feature:70083-70439:-1:exon

WP_025243877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70083-70439:-1:exon

SOPEG_RS23700
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rpmJ
locus tag: SOPEG_RS23700
old locus tag: SOPEG_0075
so part of: sequence
location: complement(70587..70703)
location: region:70587-70703:-1
so has part: feature:70587-70703:-1:exon
subclass of: SO_0000010

position:70587:-1
position: 70587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70703:-1
position: 70703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70587-70703:-1:exon

SOPEG_RS23700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rpmJ
locus tag: SOPEG_RS23700
old locus tag: SOPEG_0075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L36
translation: MKVRASVKKLCRNCKIVKRNGVVRVICSAEPKHKQRQG
SIO_010081: SOPEG_RS23700
subclass of: SO_0000673
so part of: SOPEG_RS23700
location: complement(70587..70703)
location: region:70587-70703:-1
so has part: feature:70587-70703:-1:exon

WP_002227352.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70587-70703:-1:exon

SOPEG_RS00400
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: secY
locus tag: SOPEG_RS00400
old locus tag: SOPEG_0076
so part of: sequence
location: complement(70737..72068)
location: region:70737-72068:-1
so has part: feature:70737-72068:-1:exon
subclass of: SO_0000010

position:70737:-1
position: 70737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72068:-1
position: 72068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70737-72068:-1:exon

SOPEG_RS00400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: secY
locus tag: SOPEG_RS00400
old locus tag: SOPEG_0076
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312192.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecY
translation: MARQPGLDFQSAKGGLGELKRRLLFVIGALIVFRIGSFIPIPGIDATVLAKLLEQQRGTIIEMFNMFSGGALSRASIFALGIMPYISASIIIQLLTVVHPALAEIKKEGEAGRRKISQYTRYGTLVLAIFQSIGIATGLPNMSEMQGLVINPGFAFYFTAVVSMVCGTMFLMWLGEQITERGIGNGISIIIFAGIVAGLPPAIGHTIEQARQGDMHFLVLLLVAVLVFAVTFFVVFVERGQRRIVVNYAKRQQGRRVYAAQSTYLPLKVNMAGVIPAIFASSIILFPATIASWFGGGTGWGWLSAISLYLQPGQPLYVLLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTARYIDKVMTRLTLVGAMYITFICLIPEFMRDAMKVPFYFGGTSLLIVVVVIMDFMTQVQTLMMSSQYESALKKANLKGYNR
SIO_010081: SOPEG_RS00400
subclass of: SO_0000673
so part of: SOPEG_RS00400
location: complement(70737..72068)
location: region:70737-72068:-1
so has part: feature:70737-72068:-1:exon

WP_025243878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70737-72068:-1:exon

SOPEG_RS00405
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rplO
locus tag: SOPEG_RS00405
old locus tag: SOPEG_0077
so part of: sequence
location: complement(72047..72511)
location: region:72047-72511:-1
so has part: feature:72047-72511:-1:exon
subclass of: SO_0000010

position:72047:-1
position: 72047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72511:-1
position: 72511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72047-72511:-1:exon

SOPEG_RS00405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rplO
locus tag: SOPEG_RS00405
old locus tag: SOPEG_0077
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L15
translation: MRLNTLSPAEGSKHASKRPGRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRRLPKFGFTSRKSMVTAEVRLSDLAHVEGEVVDLNALKAANIVGIQTEFAKIMLSGEVKRAVTVRGLRVSKGARAAIEAAGGKIEELSSRWLDNRD
SIO_010081: SOPEG_RS00405
subclass of: SO_0000673
so part of: SOPEG_RS00405
location: complement(72047..72511)
location: region:72047-72511:-1
so has part: feature:72047-72511:-1:exon

WP_025243879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72047-72511:-1:exon

SOPEG_RS00410
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rpmD
locus tag: SOPEG_RS00410
old locus tag: SOPEG_0078
so part of: sequence
location: complement(72515..72694)
location: region:72515-72694:-1
so has part: feature:72515-72694:-1:exon
subclass of: SO_0000010

position:72515:-1
position: 72515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72694:-1
position: 72694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72515-72694:-1:exon

SOPEG_RS00410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rpmD
locus tag: SOPEG_RS00410
old locus tag: SOPEG_0078
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L30
translation: MAQTIKITQTRSSIGRLPKHKATLVGLGLRRIGHTVERENTPAVRGMVNLVSYMVKVEE
SIO_010081: SOPEG_RS00410
subclass of: SO_0000673
so part of: SOPEG_RS00410
location: complement(72515..72694)
location: region:72515-72694:-1
so has part: feature:72515-72694:-1:exon

WP_025243880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72515-72694:-1:exon

SOPEG_RS00415
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rpsE
locus tag: SOPEG_RS00415
old locus tag: SOPEG_0079
so part of: sequence
location: complement(72701..73201)
location: region:72701-73201:-1
so has part: feature:72701-73201:-1:exon
subclass of: SO_0000010

position:72701:-1
position: 72701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73201:-1
position: 73201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72701-73201:-1:exon

SOPEG_RS00415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rpsE
locus tag: SOPEG_RS00415
old locus tag: SOPEG_0079
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002445361.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S5
translation: MAHIEKQAGELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNGRVGFGYGKAREVPAAIQKAMEKARRNMMNVALNSGTLQHPIKGAHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDALGNMKSPEMVAAKRGKSVEEILG
SIO_010081: SOPEG_RS00415
subclass of: SO_0000673
so part of: SOPEG_RS00415
location: complement(72701..73201)
location: region:72701-73201:-1
so has part: feature:72701-73201:-1:exon

WP_025243881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72701-73201:-1:exon

SOPEG_RS00420
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rplR
locus tag: SOPEG_RS00420
old locus tag: SOPEG_0080
so part of: sequence
location: complement(73216..73569)
location: region:73216-73569:-1
so has part: feature:73216-73569:-1:exon
subclass of: SO_0000010

position:73216:-1
position: 73216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73569:-1
position: 73569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73216-73569:-1:exon

SOPEG_RS00420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rplR
locus tag: SOPEG_RS00420
old locus tag: SOPEG_0080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L18
translation: MDKKAARIRRATRARRKLQELGATRLVVHRTPRHIYAQVIAPNGSEVLVAASTVEKAIVEQLKGTGNKDAAAAVGKTIAERALEKGIKDVSFDRSGFQYHGRVQALADAAREAGLQF
SIO_010081: SOPEG_RS00420
subclass of: SO_0000673
so part of: SOPEG_RS00420
location: complement(73216..73569)
location: region:73216-73569:-1
so has part: feature:73216-73569:-1:exon

WP_025243882.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73216-73569:-1:exon

SOPEG_RS00425
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rplF
locus tag: SOPEG_RS00425
old locus tag: SOPEG_0081
so part of: sequence
location: complement(73579..74112)
location: region:73579-74112:-1
so has part: feature:73579-74112:-1:exon
subclass of: SO_0000010

position:73579:-1
position: 73579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74112:-1
position: 74112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73579-74112:-1:exon

SOPEG_RS00425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rplF
locus tag: SOPEG_RS00425
old locus tag: SOPEG_0081
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L6
translation: MSRVAKAPVVIPAGVEVKLNGQDISIKGKNGELTRTIHEAVDVQHADNQLTFAPREGHANGWALAGTTRALLNGMVIGVTDGFIKKLQLVGVGYRAAVKGNVVNLSLGFSHPIDHQLPAGITAECPSQTEIVLKGADKQIIGQVAADLRAYRRPEPYKGKGVRYADEVVRTKEAKKK
SIO_010081: SOPEG_RS00425
subclass of: SO_0000673
so part of: SOPEG_RS00425
location: complement(73579..74112)
location: region:73579-74112:-1
so has part: feature:73579-74112:-1:exon

WP_025243883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73579-74112:-1:exon

SOPEG_RS00430
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rpsH
locus tag: SOPEG_RS00430
old locus tag: SOPEG_0082
so part of: sequence
location: complement(74126..74518)
location: region:74126-74518:-1
so has part: feature:74126-74518:-1:exon
subclass of: SO_0000010

position:74126:-1
position: 74126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74518:-1
position: 74518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74126-74518:-1:exon

SOPEG_RS00430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rpsH
locus tag: SOPEG_RS00430
old locus tag: SOPEG_0082
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S8
translation: MSMQDPIADMLTRIRNGQAANKTAVSMPSSKLKVAIANLLKEEGFIEDYKVEGDTMPTLELVLKYFQGKPVVESIQRISRPGLRIYKKKDALPKVMAGMGIAVVSTSKGLMTDRAARQAGLGGEIICYVA
SIO_010081: SOPEG_RS00430
subclass of: SO_0000673
so part of: SOPEG_RS00430
location: complement(74126..74518)
location: region:74126-74518:-1
so has part: feature:74126-74518:-1:exon

WP_025243884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74126-74518:-1:exon

SOPEG_RS00435
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rpsN
locus tag: SOPEG_RS00435
old locus tag: SOPEG_0083
so part of: sequence
location: complement(74553..74858)
location: region:74553-74858:-1
so has part: feature:74553-74858:-1:exon
subclass of: SO_0000010

position:74553:-1
position: 74553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74858:-1
position: 74858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74553-74858:-1:exon

SOPEG_RS00435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rpsN
locus tag: SOPEG_RS00435
old locus tag: SOPEG_0083
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S14
translation: MAKQSMKAREVKRVKLADKFFAKRAELKTIISDVNASDEERWDAVLKLQTLPRDSSPSRQRNRCRQTGRPHAFLRKFGLSRIKVREAAMRGEIPGLRKASW
SIO_010081: SOPEG_RS00435
subclass of: SO_0000673
so part of: SOPEG_RS00435
location: complement(74553..74858)
location: region:74553-74858:-1
so has part: feature:74553-74858:-1:exon

WP_025243885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74553-74858:-1:exon

SOPEG_RS00440
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rplE
locus tag: SOPEG_RS00440
old locus tag: SOPEG_0084
so part of: sequence
location: complement(74872..75411)
location: region:74872-75411:-1
so has part: feature:74872-75411:-1:exon
subclass of: SO_0000010

position:74872:-1
position: 74872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75411:-1
position: 75411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74872-75411:-1:exon

SOPEG_RS00440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rplE
locus tag: SOPEG_RS00440
old locus tag: SOPEG_0084
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L5
translation: MAKLHDYYKDEVVSQLMKQFGYHSVMQVPRVGKITLNMGVGEAIADKKLLDNATANLTAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLISIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDDEGRALLTAFNFPFRK
SIO_010081: SOPEG_RS00440
subclass of: SO_0000673
so part of: SOPEG_RS00440
location: complement(74872..75411)
location: region:74872-75411:-1
so has part: feature:74872-75411:-1:exon

WP_025243886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74872-75411:-1:exon

SOPEG_RS00445
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rplX
locus tag: SOPEG_RS00445
old locus tag: SOPEG_0085
so part of: sequence
location: complement(75426..75740)
location: region:75426-75740:-1
so has part: feature:75426-75740:-1:exon
subclass of: SO_0000010

position:75426:-1
position: 75426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75740:-1
position: 75740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75426-75740:-1:exon

SOPEG_RS00445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rplX
locus tag: SOPEG_RS00445
old locus tag: SOPEG_0085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L24
translation: MAAKIRRDDEVIVLTGKDKGKRGKVKNVLSTGKAIVEGINLVKKHRKPVPAMNQPGGIVEKEAAIDLSNLAIFNAASSKADRVGFKIEDGKKVRVFKSNGETIK
SIO_010081: SOPEG_RS00445
subclass of: SO_0000673
so part of: SOPEG_RS00445
location: complement(75426..75740)
location: region:75426-75740:-1
so has part: feature:75426-75740:-1:exon

WP_025243887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75426-75740:-1:exon

SOPEG_RS00450
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rplN
locus tag: SOPEG_RS00450
old locus tag: SOPEG_0086
so part of: sequence
location: complement(75751..76122)
location: region:75751-76122:-1
so has part: feature:75751-76122:-1:exon
subclass of: SO_0000010

position:75751:-1
position: 75751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76122:-1
position: 76122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75751-76122:-1:exon

SOPEG_RS00450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rplN
locus tag: SOPEG_RS00450
old locus tag: SOPEG_0086
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L14
translation: MIQEQTMLTVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVVRFDGNACVLLNNNSEQPIGTRIFGPVTRELRTEKFMKIISLAPEVL
SIO_010081: SOPEG_RS00450
subclass of: SO_0000673
so part of: SOPEG_RS00450
location: complement(75751..76122)
location: region:75751-76122:-1
so has part: feature:75751-76122:-1:exon

WP_011412078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75751-76122:-1:exon

SOPEG_RS00455
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rpsQ
locus tag: SOPEG_RS00455
old locus tag: SOPEG_0087
so part of: sequence
location: complement(76298..76552)
location: region:76298-76552:-1
so has part: feature:76298-76552:-1:exon
subclass of: SO_0000010

position:76298:-1
position: 76298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76552:-1
position: 76552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76298-76552:-1:exon

SOPEG_RS00455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rpsQ
locus tag: SOPEG_RS00455
old locus tag: SOPEG_0087
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S17
translation: MSDQIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKLHVHDENNDSNIGDIVEISECRPISKTKSWTLVRVVEKAIL
SIO_010081: SOPEG_RS00455
subclass of: SO_0000673
so part of: SOPEG_RS00455
location: complement(76298..76552)
location: region:76298-76552:-1
so has part: feature:76298-76552:-1:exon

WP_025243888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76298-76552:-1:exon

SOPEG_RS00460
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rpmC
locus tag: SOPEG_RS00460
old locus tag: SOPEG_0088
so part of: sequence
location: complement(76552..76743)
location: region:76552-76743:-1
so has part: feature:76552-76743:-1:exon
subclass of: SO_0000010

position:76743:-1
position: 76743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76552-76743:-1:exon

SOPEG_RS00460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rpmC
locus tag: SOPEG_RS00460
old locus tag: SOPEG_0088
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L29
translation: MKANELREKSAEELNTELLNLLREQFNLRMQAASGQLQQTHLLKQVRRNVARVKTLLTEKAGA
SIO_010081: SOPEG_RS00460
subclass of: SO_0000673
so part of: SOPEG_RS00460
location: complement(76552..76743)
location: region:76552-76743:-1
so has part: feature:76552-76743:-1:exon

WP_025243889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76552-76743:-1:exon

SOPEG_RS00465
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rplP
locus tag: SOPEG_RS00465
old locus tag: SOPEG_0089
so part of: sequence
location: complement(76743..77153)
location: region:76743-77153:-1
so has part: feature:76743-77153:-1:exon
subclass of: SO_0000010

position:77153:-1
position: 77153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76743-77153:-1:exon

SOPEG_RS00465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rplP
locus tag: SOPEG_RS00465
old locus tag: SOPEG_0089
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L16
translation: MLQPKRTKFRKMHKGRNRGLAAGTDVSFGTFGLKAVGRGRLTARQIEAARRAMTRAVKRQGKIWIRIFPDKPITEKPLEVRMGKGKGNVEYWVALIQPGKVLYEMDGVPEELAREAFKLAAAKLPIKTTFVTKTVM
SIO_010081: SOPEG_RS00465
subclass of: SO_0000673
so part of: SOPEG_RS00465
location: complement(76743..77153)
location: region:76743-77153:-1
so has part: feature:76743-77153:-1:exon

WP_025243890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76743-77153:-1:exon

SOPEG_RS00470
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rpsC
locus tag: SOPEG_RS00470
old locus tag: SOPEG_0090
so part of: sequence
location: complement(77166..77864)
location: region:77166-77864:-1
so has part: feature:77166-77864:-1:exon
subclass of: SO_0000010

position:77166:-1
position: 77166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77864:-1
position: 77864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77166-77864:-1:exon

SOPEG_RS00470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rpsC
locus tag: SOPEG_RS00470
old locus tag: SOPEG_0090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S3
translation: MGQKVHPNGIRLGIVKPWNSTWYANTKEFADNLDSDFKVRQFLTKELSKASVSRVVIERPAKSIRATIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSISSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRKGRK
SIO_010081: SOPEG_RS00470
subclass of: SO_0000673
so part of: SOPEG_RS00470
location: complement(77166..77864)
location: region:77166-77864:-1
so has part: feature:77166-77864:-1:exon

WP_025243891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77166-77864:-1:exon

SOPEG_RS00475
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rplV
locus tag: SOPEG_RS00475
old locus tag: SOPEG_0091
so part of: sequence
location: complement(77882..78214)
location: region:77882-78214:-1
so has part: feature:77882-78214:-1:exon
subclass of: SO_0000010

position:77882:-1
position: 77882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78214:-1
position: 78214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77882-78214:-1:exon

SOPEG_RS00475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rplV
locus tag: SOPEG_RS00475
old locus tag: SOPEG_0091
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L22
translation: METIAQHRHARSSAQKVRLVADLIRGKKVSQALEVLTYTNKKAAGLVKKVLESAIANAEHNDGADIDDLKVAKIFVDAGPSMKRIMPRAKGRADRILKRTSHITVVVSDR
SIO_010081: SOPEG_RS00475
subclass of: SO_0000673
so part of: SOPEG_RS00475
location: complement(77882..78214)
location: region:77882-78214:-1
so has part: feature:77882-78214:-1:exon

WP_011412083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77882-78214:-1:exon

SOPEG_RS00480
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rpsS
locus tag: SOPEG_RS00480
old locus tag: SOPEG_0092
so part of: sequence
location: complement(78229..78507)
location: region:78229-78507:-1
so has part: feature:78229-78507:-1:exon
subclass of: SO_0000010

position:78229:-1
position: 78229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78507:-1
position: 78507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78229-78507:-1:exon

SOPEG_RS00480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rpsS
locus tag: SOPEG_RS00480
old locus tag: SOPEG_0092
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S19
translation: MPRSLKKGPFIDLHLLKKVEKAVESGDKKPIRTWSRRSTIFPTMIGLTIAVHNGRQHVPVFVADEMVGHKLGEFAPTRTYRGHAADKKAKKR
SIO_010081: SOPEG_RS00480
subclass of: SO_0000673
so part of: SOPEG_RS00480
location: complement(78229..78507)
location: region:78229-78507:-1
so has part: feature:78229-78507:-1:exon

WP_011412084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78229-78507:-1:exon

SOPEG_RS00485
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rplB
locus tag: SOPEG_RS00485
old locus tag: SOPEG_0093
so part of: sequence
location: complement(78524..79345)
location: region:78524-79345:-1
so has part: feature:78524-79345:-1:exon
subclass of: SO_0000010

position:78524:-1
position: 78524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79345:-1
position: 79345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78524-79345:-1:exon

SOPEG_RS00485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rplB
locus tag: SOPEG_RS00485
old locus tag: SOPEG_0093
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L2
translation: MAIVKCKPTSPGRRHVVKVVNPELHKGKPYAPLLETLSKSGGRNNNGRITARHIGGGHKQHYRLIDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDGERRYILAPKGLKAGDQIQSGVDAAIKAGNALPMRNIPVGSTVHNVEMKPGKGGQLARSAGAYVQIVARDGAYVTLRLRSGEMRKIQSECRATLGEVGNAEHMLRVLGKAGASRWRGIRPTVRGTAMNPVDHPHGGGEGRNFGKHPVSPWGIQTKGKKTRSNKLTDKFIVRRRSK
SIO_010081: SOPEG_RS00485
subclass of: SO_0000673
so part of: SOPEG_RS00485
location: complement(78524..79345)
location: region:78524-79345:-1
so has part: feature:78524-79345:-1:exon

WP_025243892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78524-79345:-1:exon

SOPEG_RS00490
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rplW
locus tag: SOPEG_RS00490
old locus tag: SOPEG_0094
so part of: sequence
location: complement(79365..79667)
location: region:79365-79667:-1
so has part: feature:79365-79667:-1:exon
subclass of: SO_0000010

position:79365:-1
position: 79365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79667:-1
position: 79667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79365-79667:-1:exon

SOPEG_RS00490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rplW
locus tag: SOPEG_RS00490
old locus tag: SOPEG_0094
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L23
translation: MISEERLLKVLRAPHVSEKASTAMEKHNTIVLKVAKDATKVEIKAAVHKLFEVEVNDVRTLVVKGKTKRHGQRIGRRSDWKKAYVTLKESQNLDFIGGAE
SIO_010081: SOPEG_RS00490
subclass of: SO_0000673
so part of: SOPEG_RS00490
location: complement(79365..79667)
location: region:79365-79667:-1
so has part: feature:79365-79667:-1:exon

WP_025243893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79365-79667:-1:exon

SOPEG_RS00495
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rplD
locus tag: SOPEG_RS00495
old locus tag: SOPEG_0095
so part of: sequence
location: complement(79664..80269)
location: region:79664-80269:-1
so has part: feature:79664-80269:-1:exon
subclass of: SO_0000010

position:79664:-1
position: 79664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80269:-1
position: 80269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79664-80269:-1:exon

SOPEG_RS00495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rplD
locus tag: SOPEG_RS00495
old locus tag: SOPEG_0095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L4
translation: MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRGQKTRAEVTGSGKKPWRQKGTGRARSGSVKSPLWRSGGVTFAAKPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEQFSVEAPKTKLLSQKLRDMALEDVLIITGELDENLFLAARNLYKVDVRDAQGIDPVSLIAFGKVVMTADAVKQVEEMLA
SIO_010081: SOPEG_RS00495
subclass of: SO_0000673
so part of: SOPEG_RS00495
location: complement(79664..80269)
location: region:79664-80269:-1
so has part: feature:79664-80269:-1:exon

WP_025243894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79664-80269:-1:exon

SOPEG_RS00500
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rplC
locus tag: SOPEG_RS00500
old locus tag: SOPEG_0096
so part of: sequence
location: complement(80286..80915)
location: region:80286-80915:-1
so has part: feature:80286-80915:-1:exon
subclass of: SO_0000010

position:80286:-1
position: 80286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80915:-1
position: 80915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80286-80915:-1:exon

SOPEG_RS00500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rplC
locus tag: SOPEG_RS00500
old locus tag: SOPEG_0096
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L3
translation: MKGLIGRKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLENDGYRAIQITAGTKKANRVTKPEAGHFAKVGVEAGRGLWEFRVEDGEEVIVGQSITVELFADVKKVDVTGTSKGKGFAGTVKCWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVDVERNLLLVKGTVPGATGGDLIVKPAVKA
SIO_010081: SOPEG_RS00500
subclass of: SO_0000673
so part of: SOPEG_RS00500
location: complement(80286..80915)
location: region:80286-80915:-1
so has part: feature:80286-80915:-1:exon

WP_025243895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80286-80915:-1:exon

SOPEG_RS00505
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rpsJ
locus tag: SOPEG_RS00505
old locus tag: SOPEG_0097
so part of: sequence
location: complement(80948..81259)
location: region:80948-81259:-1
so has part: feature:80948-81259:-1:exon
subclass of: SO_0000010

position:80948:-1
position: 80948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81259:-1
position: 81259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80948-81259:-1:exon

SOPEG_RS00505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rpsJ
locus tag: SOPEG_RS00505
old locus tag: SOPEG_0097
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S10
translation: MQNQRIRIRLKAFDHRLIDQSTAEIVETAKRTGAQVRGPIPLPTRKERFTILISPHVNKDARDQYEIRTHKRLVDIVEPTEKTVDALMCLDLAAGVDVQISLG
SIO_010081: SOPEG_RS00505
subclass of: SO_0000673
so part of: SOPEG_RS00505
location: complement(80948..81259)
location: region:80948-81259:-1
so has part: feature:80948-81259:-1:exon

WP_025243896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80948-81259:-1:exon

SOPEG_RS00510
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: bfr
locus tag: SOPEG_RS00510
old locus tag: SOPEG_0098
so part of: sequence
location: complement(81791..82270)
location: region:81791-82270:-1
so has part: feature:81791-82270:-1:exon
subclass of: SO_0000010

position:81791:-1
position: 81791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82270:-1
position: 82270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81791-82270:-1:exon

SOPEG_RS00510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: bfr
locus tag: SOPEG_RS00510
old locus tag: SOPEG_0098
EC number: 1.16.3.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014333589.1
GO function: GO:0008199 - ferric iron binding [Evidence IEA]; GO:0004322 - ferroxidase activity [Evidence IEA]
GO process: GO:0006880 - intracellular sequestering of iron ion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bacterioferritin
translation: MKGDAQIINHLNKLLGNELVAINQYFLHARMFKNWGLMRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGRLNIGEDVEEMLRSDLYLELQGAQDLREGIAYADSIRDYVSRDLMIEILTDEEEHIDFLETELALITRIGTQNYLQSQLKDAAQ
SIO_010081: SOPEG_RS00510
subclass of: SO_0000673
so part of: SOPEG_RS00510
location: complement(81791..82270)
location: region:81791-82270:-1
so has part: feature:81791-82270:-1:exon

WP_025243897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81791-82270:-1:exon

SOPEG_RS00515
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: bfd
locus tag: SOPEG_RS00515
old locus tag: SOPEG_0099
so part of: sequence
location: complement(82345..82539)
location: region:82345-82539:-1
so has part: feature:82345-82539:-1:exon
subclass of: SO_0000010

position:82345:-1
position: 82345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82539:-1
position: 82539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82345-82539:-1:exon

SOPEG_RS00515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: bfd
locus tag: SOPEG_RS00515
old locus tag: SOPEG_0099
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013573671.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bacterioferritin-associated ferredoxin
translation: MYVCLCNAVSDKAIRAAVRLHQPQTFQQLKRLVPMGTQCGKCVCVARRIMEDELQHIAPLENIA
SIO_010081: SOPEG_RS00515
subclass of: SO_0000673
so part of: SOPEG_RS00515
location: complement(82345..82539)
location: region:82345-82539:-1
so has part: feature:82345-82539:-1:exon

WP_025243898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82345-82539:-1:exon

SOPEG_RS29005
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS29005
so part of: sequence
location: 82807..82956
location: region:82807-82956:1
so has part: feature:82807-82956:1:exon
subclass of: SO_0000010

position:82807:1
position: 82807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82956:1
position: 82956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82807-82956:1:exon

SOPEG_RS29005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS29005
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTNPIPTAEETSLAALAGELRISLGKLVRRLRAQRFHLCAKIGVAAAGS
SIO_010081: SOPEG_RS29005
subclass of: SO_0000673
so part of: SOPEG_RS29005
location: 82807..82956
location: region:82807-82956:1
so has part: feature:82807-82956:1:exon

WP_236851870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82807-82956:1:exon

SOPEG_RS00520
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00520
old locus tag: SOPEG_ps0100
so part of: sequence
location: 82934..83248
location: region:82934-83248:1
so has part: feature:82934-83248:1:exon
subclass of: SO_0000010

position:82934:1
position: 82934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83248:1
position: 83248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82934-83248:1:exon

SOPEG_RS00520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00520
old locus tag: SOPEG_ps0100
inference: COORDINATES: protein motif:HMM:NF024212.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MarR family transcriptional regulator
translation: MLLRLDRDGPATVSALARAESVRPQSMRSTVAALQALGAVMGVADPVDGRQTLITLTDAFRQRLEAHRSAKNDWLHGALERQPSAAEQAQLAAAVRLLQRLADY
SIO_010081: SOPEG_RS00520
subclass of: SO_0000673
so part of: SOPEG_RS00520
location: 82934..83248
location: region:82934-83248:1
so has part: feature:82934-83248:1:exon

WP_236851589.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82934-83248:1:exon

SOPEG_RS00525
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00525
old locus tag: SOPEG_ps0101
so part of: sequence
location: 83395..83661
location: region:83395-83661:1
so has part: feature:83395-83661:1:exon
subclass of: SO_0000010

position:83395:1
position: 83395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83661:1
position: 83661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83395-83661:1:exon

SOPEG_RS00525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00525
old locus tag: SOPEG_ps0101
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MWHYWFSWFAGGLLLTNAVPHLCGGFLMGRAFPTPFAKPRGRGLSSAPVNVLWGCVNLVLGNVFLCRIGDFDIRITLPPPPPLSGSAF
SIO_010081: SOPEG_RS00525
subclass of: SO_0000673
so part of: SOPEG_RS00525
location: 83395..83661
location: region:83395-83661:1
so has part: feature:83395-83661:1:exon

WP_200867847.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83395-83661:1:exon

SOPEG_RS00530
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00530
old locus tag: SOPEG_ps0102
so part of: sequence
location: 83849..84631
location: region:83849-84631:1
so has part: feature:83849-84631:1:exon
subclass of: SO_0000010

position:83849:1
position: 83849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84631:1
position: 84631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83849-84631:1:exon

SOPEG_RS00530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00530
old locus tag: SOPEG_ps0102
inference: COORDINATES: protein motif:HMM:NF019310.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MLTQLTQHNASAVGTVMALQFGPQLLLLPWTGFAADHFNQRRLLLATQASMGVLALVLGALILFGVVQLWQVYLFVLLFGCAAAFDAPVRQTFVAEMVGDADLPNAVALNSTLYNGVRLVGPAIAGVIIASVGTGWAFLLNGVSFLAVLVSLSFLRVADLQANARARRTRGSLTEGFRYVASRPDLKVILVMLLLIGTFGLNFPIFISTMAVNVFHTDARGFGLLSSIMAIGTLSGALLAAGGGAVFGLGCLLAAVAPGY
SIO_010081: SOPEG_RS00530
subclass of: SO_0000673
so part of: SOPEG_RS00530
location: 83849..84631
location: region:83849-84631:1
so has part: feature:83849-84631:1:exon

WP_200867848.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83849-84631:1:exon

SOPEG_RS00535
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: istA
locus tag: SOPEG_RS00535
old locus tag: SOPEG_ps0103
pseudo: true
so part of: sequence
location: 85045..86579
location: region:85045-86579:1
so has part: feature:85045-86579:1:exon
subclass of: SO_0000010

position:85045:1
position: 85045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86579:1
position: 86579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85045-86579:1:exon

SOPEG_RS00535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: istA
locus tag: SOPEG_RS00535
old locus tag: SOPEG_ps0103
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025245097.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21 family transposase
SIO_010081: SOPEG_RS00535
subclass of: SO_0000673
so part of: SOPEG_RS00535
location: 85045..86579
location: region:85045-86579:1
so has part: feature:85045-86579:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:85045-86579:1:exon

SOPEG_RS00540
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00540
old locus tag: SOPEG_ps0104
pseudo: true
so part of: sequence
location: 86591..>87037
location: region:86591-87037:1
so has part: feature:86591-87037:1:exon
subclass of: SO_0000010

position:86591:1
position: 86591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87037:1
position: 87037
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86591-87037:1:exon

SOPEG_RS00540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00540
old locus tag: SOPEG_ps0104
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025245096.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-binding protein
SIO_010081: SOPEG_RS00540
subclass of: SO_0000673
so part of: SOPEG_RS00540
location: 86591..>87037
location: region:86591-87037:1
so has part: feature:86591-87037:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:86591-87037:1:exon

SOPEG_RS00545
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00545
old locus tag: SOPEG_0105
so part of: sequence
location: complement(87282..87833)
location: region:87282-87833:-1
so has part: feature:87282-87833:-1:exon
subclass of: SO_0000010

position:87282:-1
position: 87282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87833:-1
position: 87833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87282-87833:-1:exon

SOPEG_RS00545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00545
old locus tag: SOPEG_0105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012303420.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MGTKENKFAFGWEGKESFRERLEMLIGGRSIRSAAKAWGLPASTINNYLHKGTEPALKVVLSIAEAENVSLEWLASGLNKDHGAKSSSKTQEHDNLKHTWLMIYESLDRQDIESLIRLIHKEGAKGILLSSSRIDSVDNALLLLSQEEKERLMRLYDQIKKGASEEGEVASEDSLASERKRAV
SIO_010081: SOPEG_RS00545
subclass of: SO_0000673
so part of: SOPEG_RS00545
location: complement(87282..87833)
location: region:87282-87833:-1
so has part: feature:87282-87833:-1:exon

WP_025243901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87282-87833:-1:exon

SOPEG_RS00550
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00550
old locus tag: SOPEG_0106
so part of: sequence
location: 88002..88238
location: region:88002-88238:1
so has part: feature:88002-88238:1:exon
subclass of: SO_0000010

position:88002:1
position: 88002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88238:1
position: 88238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88002-88238:1:exon

SOPEG_RS00550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00550
old locus tag: SOPEG_0106
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000989761.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MIDRNEVNHRDWHRIDIVASLHKKGITMQDLSRGSGLASSTLKNALYRPYPKGERIIANALNVDPASIWPSRYMIKVS
SIO_010081: SOPEG_RS00550
subclass of: SO_0000673
so part of: SOPEG_RS00550
location: 88002..88238
location: region:88002-88238:1
so has part: feature:88002-88238:1:exon

WP_025243902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88002-88238:1:exon

SOPEG_RS00555
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00555
old locus tag: SOPEG_ps0107
pseudo: true
so part of: sequence
location: 88241..90282
location: region:88241-90282:1
so has part: feature:88241-90282:1:exon
subclass of: SO_0000010

position:88241:1
position: 88241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90282:1
position: 90282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88241-90282:1:exon

SOPEG_RS00555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00555
old locus tag: SOPEG_ps0107
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003030404.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Mu transposase C-terminal domain-containing protein
SIO_010081: SOPEG_RS00555
subclass of: SO_0000673
so part of: SOPEG_RS00555
location: 88241..90282
location: region:88241-90282:1
so has part: feature:88241-90282:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:88241-90282:1:exon

SOPEG_RS00560
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00560
old locus tag: SOPEG_ps0108
pseudo: true
so part of: sequence
location: 90294..91223
location: region:90294-91223:1
so has part: feature:90294-91223:1:exon
subclass of: SO_0000010

position:90294:1
position: 90294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91223:1
position: 91223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90294-91223:1:exon

SOPEG_RS00560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00560
old locus tag: SOPEG_ps0108
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016192740.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: AAA family ATPase
SIO_010081: SOPEG_RS00560
subclass of: SO_0000673
so part of: SOPEG_RS00560
location: 90294..91223
location: region:90294-91223:1
so has part: feature:90294-91223:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90294-91223:1:exon

SOPEG_RS00565
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00565
so part of: sequence
location: 91235..91450
location: region:91235-91450:1
so has part: feature:91235-91450:1:exon
subclass of: SO_0000010

position:91235:1
position: 91235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91450:1
position: 91450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91235-91450:1:exon

SOPEG_RS00565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00565
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVHHKAASTNTYLIAAMTQAGAVIHYLTIRGVSVKSVILHNCKSVIRIEHALLNKSEIFDDFLPIRAIVT
SIO_010081: SOPEG_RS00565
subclass of: SO_0000673
so part of: SOPEG_RS00565
location: 91235..91450
location: region:91235-91450:1
so has part: feature:91235-91450:1:exon

WP_025243903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91235-91450:1:exon

SOPEG_RS00570
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00570
old locus tag: SOPEG_0109
so part of: sequence
location: complement(91443..92366)
location: region:91443-92366:-1
so has part: feature:91443-92366:-1:exon
subclass of: SO_0000010

position:91443:-1
position: 91443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92366:-1
position: 92366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91443-92366:-1:exon

SOPEG_RS00570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00570
old locus tag: SOPEG_0109
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDMTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDAIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKIFGEGEWKVRQHGAERRRVWRKLHLAVDSATHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKILLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS00570
subclass of: SO_0000673
so part of: SOPEG_RS00570
location: complement(91443..92366)
location: region:91443-92366:-1
so has part: feature:91443-92366:-1:exon

WP_025243904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91443-92366:-1:exon

SOPEG_RS22335
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS22335
old locus tag: SOPEG_ps0110
so part of: sequence
location: 92455..93057
location: region:92455-93057:1
so has part: feature:92455-93057:1:exon
subclass of: SO_0000010

position:92455:1
position: 92455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93057:1
position: 93057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92455-93057:1:exon

SOPEG_RS22335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS22335
old locus tag: SOPEG_ps0110
inference: COORDINATES: protein motif:HMM:NF012798.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MRPGELAALSWRDIDFNRKEMTISRALSDRIFKLPKTNKPRTIILSPPAIEALKCQQKHTAMLQDIDVIIYCTKKEKRHEKIRPVFAPSTTASSDNHGKFFMASSLLNLWEKAVRRSGIRYRPIYQLRHTFACWNLTAHGNVAFIAKQMGHADYTMLVNVYGRWMDSESHTENDKIWESLAAKGHQEALKWSQKCPKKIG
SIO_010081: SOPEG_RS22335
subclass of: SO_0000673
so part of: SOPEG_RS22335
location: 92455..93057
location: region:92455-93057:1
so has part: feature:92455-93057:1:exon

WP_071882103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92455-93057:1:exon

SOPEG_RS00580
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: kdsC
locus tag: SOPEG_RS00580
old locus tag: SOPEG_0111
so part of: sequence
location: 93151..93714
location: region:93151-93714:1
so has part: feature:93151-93714:1:exon
subclass of: SO_0000010

position:93151:1
position: 93151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93714:1
position: 93714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93151-93714:1:exon

SOPEG_RS00580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: kdsC
locus tag: SOPEG_RS00580
old locus tag: SOPEG_0111
EC number: 3.1.3.45
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410067.1
GO function: GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-deoxy-manno-octulosonate-8-phosphatase KdsC
translation: MQQTPTVETCYGPVAQQVLQRARHIRLLICDVDGVMSDGLIYMGNHGEELKAFNVRDGYGIRCLLTSGIEVAIITGRFARLLEDRCATLGITYLYQGQSDKTLAFKALLSKLTLTAEQVAYVGDDLIDAPVMDQVGLSVAVADAHPLLRPRADYVTRIAGGRGAVREVCDLLLLAQRKLEDAKGQSV
SIO_010081: SOPEG_RS00580
subclass of: SO_0000673
so part of: SOPEG_RS00580
location: 93151..93714
location: region:93151-93714:1
so has part: feature:93151-93714:1:exon

WP_025243906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93151-93714:1:exon

SOPEG_RS00585
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: lptC
locus tag: SOPEG_RS00585
old locus tag: SOPEG_0112
so part of: sequence
location: 93711..94289
location: region:93711-94289:1
so has part: feature:93711-94289:1:exon
subclass of: SO_0000010

position:93711:1
position: 93711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94289:1
position: 94289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93711-94289:1:exon

SOPEG_RS00585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: lptC
locus tag: SOPEG_RS00585
old locus tag: SOPEG_0112
EC number: 7.5.2.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015369495.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LPS export ABC transporter periplasmic protein LptC
translation: MNKNLRWTTALLGLLVLVLIGWNLADTDSAPAQAPVNTGEPIYQSEYTTTVVYNPAGGLNYKLVADHVNHYAEQQITWFTRPVATTFDEDKVPTWTVKADKAKLTQDRMLYLYGHVQVDSLTDASQLKRITTDNAVVNLVTQDVSSDDEVTLYGTGFNSTGMKMRGNLRNKTAELIEKVKTSYEIQNSQRTP
SIO_010081: SOPEG_RS00585
subclass of: SO_0000673
so part of: SOPEG_RS00585
location: 93711..94289
location: region:93711-94289:1
so has part: feature:93711-94289:1:exon

WP_025243907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93711-94289:1:exon

SOPEG_RS00590
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: lptA
locus tag: SOPEG_RS00590
old locus tag: SOPEG_0113
so part of: sequence
location: 94258..94809
location: region:94258-94809:1
so has part: feature:94258-94809:1:exon
subclass of: SO_0000010

position:94258:1
position: 94258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94809:1
position: 94809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94258-94809:1:exon

SOPEG_RS00590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: lptA
locus tag: SOPEG_RS00590
old locus tag: SOPEG_0113
EC number: 7.5.2.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014888553.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipopolysaccharide ABC transporter substrate-binding protein LptA
translation: MKSRIHNVRPSLLLAGGLMLASAQALALTSDNQQPIHLDSAQQAVDMATNTVTLTGDVVVKRGSIDIRADKVVITRPDGKDGNEVVEGFGNPVTFYQLQDDGKPVRGHSQKMRYETANDLVILTGNAYLEQLDSNVKGDRITYLVKKQQMEAFSDKGKRVTTVLAPAQLQDKSGAKAPAKSAK
SIO_010081: SOPEG_RS00590
subclass of: SO_0000673
so part of: SOPEG_RS00590
location: 94258..94809
location: region:94258-94809:1
so has part: feature:94258-94809:1:exon

WP_025243908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94258-94809:1:exon

SOPEG_RS00595
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: lptB
locus tag: SOPEG_RS00595
old locus tag: SOPEG_0114
so part of: sequence
location: 94825..95550
location: region:94825-95550:1
so has part: feature:94825-95550:1:exon
subclass of: SO_0000010

position:94825:1
position: 94825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95550:1
position: 95550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94825-95550:1:exon

SOPEG_RS00595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: lptB
locus tag: SOPEG_RS00595
old locus tag: SOPEG_0114
EC number: 7.5.2.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LPS export ABC transporter ATP-binding protein
translation: MATLIAENLAKAYKGRRVVEDVSLKVSSGEIVGLLGPNGAGKTTTFYMVVGIIPRDAGRIVIDEDDISLLPLHTRARRGIGYLPQEASIFRRLSVFDNLMAVLQIRQDLTSEQRNDRTKELMEEFHISHLRDNLGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKKIIEHLRDSGLGVLITDHNVRETLDVCERAYIVSQGKLIAHGSPADILLDEQVKRVYLGEEFRL
SIO_010081: SOPEG_RS00595
subclass of: SO_0000673
so part of: SOPEG_RS00595
location: 94825..95550
location: region:94825-95550:1
so has part: feature:94825-95550:1:exon

WP_025243909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94825-95550:1:exon

SOPEG_RS00600
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rpoN
locus tag: SOPEG_RS00600
old locus tag: SOPEG_ps0115
pseudo: true
so part of: sequence
location: 95598..97024
location: region:95598-97024:1
so has part: feature:95598-97024:1:exon
subclass of: SO_0000010

position:95598:1
position: 95598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97024:1
position: 97024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95598-97024:1:exon

SOPEG_RS00600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rpoN
locus tag: SOPEG_RS00600
old locus tag: SOPEG_ps0115
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229051.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: RNA polymerase factor sigma-54
SIO_010081: SOPEG_RS00600
subclass of: SO_0000673
so part of: SOPEG_RS00600
location: 95598..97024
location: region:95598-97024:1
so has part: feature:95598-97024:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95598-97024:1:exon

SOPEG_RS00605
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: hpf
locus tag: SOPEG_RS00605
old locus tag: SOPEG_0116
so part of: sequence
location: 97048..97335
location: region:97048-97335:1
so has part: feature:97048-97335:1:exon
subclass of: SO_0000010

position:97048:1
position: 97048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97335:1
position: 97335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97048-97335:1:exon

SOPEG_RS00605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: hpf
locus tag: SOPEG_RS00605
old locus tag: SOPEG_0116
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004125711.1
GO process: GO:0044238 - primary metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome hibernation promoting factor
translation: MQLNITGQHVDITDALREFVTTKFSKLEQFFDRINQVYIVLKVEKVQKIAEAKVHLNGGELHATAEADDMYAAIDLLIDKLTRQLNKHKEKLKQY
SIO_010081: SOPEG_RS00605
subclass of: SO_0000673
so part of: SOPEG_RS00605
location: 97048..97335
location: region:97048-97335:1
so has part: feature:97048-97335:1:exon

WP_025243910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97048-97335:1:exon

SOPEG_RS00610
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: ptsN
locus tag: SOPEG_RS00610
old locus tag: SOPEG_0117
so part of: sequence
location: 97441..97920
location: region:97441-97920:1
so has part: feature:97441-97920:1:exon
subclass of: SO_0000010

position:97441:1
position: 97441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97920:1
position: 97920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97441-97920:1:exon

SOPEG_RS00610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: ptsN
locus tag: SOPEG_RS00610
old locus tag: SOPEG_0117
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410061.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS IIA-like nitrogen regulatory protein PtsN
translation: MTNDTAMQIDSVLNIECTRSDIHCQSKKRALEIISELAAKQLNLAPQVVFDAVLTRERMGSTGIGNGIAIPHGKLEEDTLRAVGVFIRLEQPIAFDAIDNQPVDLLFALLVPAEQCKVHLHTLSLVAKRLADKTVCRRLRAAQSDEELYQIMTETDDGD
SIO_010081: SOPEG_RS00610
subclass of: SO_0000673
so part of: SOPEG_RS00610
location: 97441..97920
location: region:97441-97920:1
so has part: feature:97441-97920:1:exon

WP_025243911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97441-97920:1:exon

SOPEG_RS00615
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rapZ
locus tag: SOPEG_RS00615
old locus tag: SOPEG_0118
so part of: sequence
location: 98014..98886
location: region:98014-98886:1
so has part: feature:98014-98886:1:exon
subclass of: SO_0000010

position:98014:1
position: 98014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98886:1
position: 98886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98014-98886:1:exon

SOPEG_RS00615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rapZ
locus tag: SOPEG_RS00615
old locus tag: SOPEG_0118
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229054.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNase adapter RapZ
translation: MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPQLASTLAASNISAAVSIDVRNMPESPEIFEQAMDNLPQAFSPQLLFLDADRNTLIRRYSDTRRLHPLSARNLSLESAIDEEDSLLEPLRSCADLVIDTSEMSVHELAEMLRTRLLGKRERELTMVFESFGYKHGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDRPVAAFLDRHTEVHNFIYQTRSYLELWLPMLETNNRSYLTVAIGCTGGKHRSVYIAEQLADYFRSRGKNVQSRHRTLEKRKSWRSNKR
SIO_010081: SOPEG_RS00615
subclass of: SO_0000673
so part of: SOPEG_RS00615
location: 98014..98886
location: region:98014-98886:1
so has part: feature:98014-98886:1:exon

WP_025243912.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98014-98886:1:exon

SOPEG_RS00620
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: npr
locus tag: SOPEG_RS00620
old locus tag: SOPEG_0119
so part of: sequence
location: 98865..99137
location: region:98865-99137:1
so has part: feature:98865-99137:1:exon
subclass of: SO_0000010

position:98865:1
position: 98865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99137:1
position: 99137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98865-99137:1:exon

SOPEG_RS00620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: npr
locus tag: SOPEG_RS00620
old locus tag: SOPEG_0119
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS phosphocarrier protein NPr
translation: MAVKQTVEIKNHLGMHARPAMKLFELVQSFDAEVLLRNDSGTEAEASSVIGLLMLDSAKGRMIEVEATGPDEVQALAAVIELFNTGFDED
SIO_010081: SOPEG_RS00620
subclass of: SO_0000673
so part of: SOPEG_RS00620
location: 98865..99137
location: region:98865-99137:1
so has part: feature:98865-99137:1:exon

WP_025243913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98865-99137:1:exon

SOPEG_RS00625
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00625
old locus tag: SOPEG_ps0120
so part of: sequence
location: 99741..100310
location: region:99741-100310:1
so has part: feature:99741-100310:1:exon
subclass of: SO_0000010

position:99741:1
position: 99741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100310:1
position: 100310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99741-100310:1:exon

SOPEG_RS00625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00625
old locus tag: SOPEG_ps0120
inference: COORDINATES: protein motif:HMM:NF024895.2
GO component: GO:0044384 - host outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ail/Lom family outer membrane beta-barrel protein
translation: MALSQPVPALAEFHSLSASYLHNFIKIKTGGTEADAGALDGINVKYRYEWGGPLSFIGSLSYMTANAYSRQVSENSFQEDARYRYSAVSLKAGPAWRFNEYVSLYGIIGVNYDDYSLHASKTAIKAGTSTATQHYRDQRQKAALAYGAGVQINPVQNMVVDLGYEASRFDHRGLTFTRNALLFGVGYRF
SIO_010081: SOPEG_RS00625
subclass of: SO_0000673
so part of: SOPEG_RS00625
location: 99741..100310
location: region:99741-100310:1
so has part: feature:99741-100310:1:exon

WP_257720401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99741-100310:1:exon

SOPEG_RS23705
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS23705
old locus tag: SOPEG_ps0122
pseudo: true
so part of: sequence
location: 100655..101852
location: region:100655-101852:1
so has part: feature:100655-101852:1:exon
subclass of: SO_0000010

position:100655:1
position: 100655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101852:1
position: 101852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100655-101852:1:exon

SOPEG_RS23705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS23705
old locus tag: SOPEG_ps0122
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS256 family transposase
SIO_010081: SOPEG_RS23705
subclass of: SO_0000673
so part of: SOPEG_RS23705
location: 100655..101852
location: region:100655-101852:1
so has part: feature:100655-101852:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100655-101852:1:exon

SOPEG_RS00640
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00640
old locus tag: SOPEG_ps0121
so part of: sequence
location: complement(101863..102330)
location: region:101863-102330:-1
so has part: feature:101863-102330:-1:exon
subclass of: SO_0000010

position:101863:-1
position: 101863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102330:-1
position: 102330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101863-102330:-1:exon

SOPEG_RS00640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00640
old locus tag: SOPEG_ps0121
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNQLMAYTCLNLTTPCAVTGKSGMPYFNPEMKALIDSPLALELFLAQEKKAREGKSYFSVQNVQPYGPEQTLQPYQFDFYPQFDCVDDPSEEVEFECIGTICHARPFKFGSTLECVDGEAPRPATFDPGERFTQKEWEIIFFSLHGLTEPVPDSV
SIO_010081: SOPEG_RS00640
subclass of: SO_0000673
so part of: SOPEG_RS00640
location: complement(101863..102330)
location: region:101863-102330:-1
so has part: feature:101863-102330:-1:exon

WP_025243917.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101863-102330:-1:exon

SOPEG_RS00645
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00645
old locus tag: SOPEG_ps0123
pseudo: true
so part of: sequence
location: complement(102522..103495)
location: region:102522-103495:-1
so has part: feature:102522-103495:-1:exon
subclass of: SO_0000010

position:102522:-1
position: 102522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103495:-1
position: 103495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102522-103495:-1:exon

SOPEG_RS00645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00645
old locus tag: SOPEG_ps0123
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006324713.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
SIO_010081: SOPEG_RS00645
subclass of: SO_0000673
so part of: SOPEG_RS00645
location: complement(102522..103495)
location: region:102522-103495:-1
so has part: feature:102522-103495:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:102522-103495:-1:exon

SOPEG_RS23710
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS23710
old locus tag: SOPEG_0124
so part of: sequence
location: complement(103618..103914)
location: region:103618-103914:-1
so has part: feature:103618-103914:-1:exon
subclass of: SO_0000010

position:103618:-1
position: 103618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103914:-1
position: 103914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103618-103914:-1:exon

SOPEG_RS23710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS23710
old locus tag: SOPEG_0124
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011411833.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MLIGKKLRDIREAEGLTREELAEITGIPVPTMKRYETGRIANVGSDTLTKFTQHPRFSKYALWLMTNQVVPESGQISPSLSPDGYTSTCSPQKIQKAG
SIO_010081: SOPEG_RS23710
subclass of: SO_0000673
so part of: SOPEG_RS23710
location: complement(103618..103914)
location: region:103618-103914:-1
so has part: feature:103618-103914:-1:exon

WP_071882104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103618-103914:-1:exon

SOPEG_RS23715
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: istA
locus tag: SOPEG_RS23715
old locus tag: SOPEG_ps0125
pseudo: true
so part of: sequence
location: 104261..105811
location: region:104261-105811:1
so has part: feature:104261-105811:1:exon
subclass of: SO_0000010

position:104261:1
position: 104261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105811:1
position: 105811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104261-105811:1:exon

SOPEG_RS23715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: istA
locus tag: SOPEG_RS23715
old locus tag: SOPEG_ps0125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025245097.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21 family transposase
SIO_010081: SOPEG_RS23715
subclass of: SO_0000673
so part of: SOPEG_RS23715
location: 104261..105811
location: region:104261-105811:1
so has part: feature:104261-105811:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:104261-105811:1:exon

SOPEG_RS00660
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: istB
locus tag: SOPEG_RS00660
old locus tag: SOPEG_0126
so part of: sequence
location: 105823..106572
location: region:105823-106572:1
so has part: feature:105823-106572:1:exon
subclass of: SO_0000010

position:105823:1
position: 105823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106572:1
position: 106572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105823-106572:1:exon

SOPEG_RS00660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: istB
locus tag: SOPEG_RS00660
old locus tag: SOPEG_0126
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025245096.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element ISSoEn3 family helper ATPase IstB
translation: MDTLLMALQELKLSAMVQALETQRELPGSYGELGFEERLSLMVEAENLHRKNNHICRLRRQSQMRLQAKPEDIRYIPSRGVTPEQMRDLLGGQYLKYQKSILITGPTGTGKTWLSCALGEQACRQQYNVHYWRVGRLLAHLHQCQVDGTYLKQLKQLEKIELLILDDVGLESISPMQATMLLEVMEDRYDKSSSILISQLPVKKWYGLIENPTTADALLDRLVHPSYRLELKGESLRKEQGVASTGKID
SIO_010081: SOPEG_RS00660
subclass of: SO_0000673
so part of: SOPEG_RS00660
location: 105823..106572
location: region:105823-106572:1
so has part: feature:105823-106572:1:exon

WP_025243921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105823-106572:1:exon

SOPEG_RS22340
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS22340
so part of: sequence
location: 106688..107455
location: region:106688-107455:1
so has part: feature:106688-107455:1:exon
subclass of: SO_0000010

position:106688:1
position: 106688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107455:1
position: 107455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106688-107455:1:exon

SOPEG_RS22340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS22340
inference: COORDINATES: protein motif:HMM:NF021648.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail tape measure protein
translation: MQVLSQDELPRFAVAANTLAMAVKSSAGEGADYMGSLYHKFDSVAEKMGRVPFAEQMASKTAYMAQAFGTTLQKISDLMEGARGTGDNYGIGLNEQLAALGMLEKILGTEASSSYESFYKVAEDGAKQLGMSFVNSAGQMLSLPEMLTKLQGHYGASIEGNLKAQAELDKAFGDGANVIKQLYGNTDVLNKHIHALGSNDGLKRAREMAEKMIVPRDRLAAIWTAIRIAWGAPCCRCYTRLSIKWRTAGKNWPAG
SIO_010081: SOPEG_RS22340
subclass of: SO_0000673
so part of: SOPEG_RS22340
location: 106688..107455
location: region:106688-107455:1
so has part: feature:106688-107455:1:exon

WP_257720402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106688-107455:1:exon

SOPEG_RS22345
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS22345
so part of: sequence
location: 107374..108363
location: region:107374-108363:1
so has part: feature:107374-108363:1:exon
subclass of: SO_0000010

position:107374:1
position: 107374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108363:1
position: 108363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107374-108363:1:exon

SOPEG_RS22345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS22345
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGRTLLPVLYPFINKMADGGQKLARWLTLFPNIARVVGYAVLAFLSLAGAGAVVNIAMGASAFVMVGLKGLWAGLTAVVKLHVAALWLYQKAVFAWAAVIRMMRGVLLAVRIAAVLTGIAMNFMSWPVLLIVGTVALLVVGCIALVKYWDTLKAAMMQTTAFKLIAAYVSWLASLFTRAWEGIRAGWQALCAYFADFSLSDTFEDMIDGVSALFIGLWASVKATFARTWNTIAETLNHLPGVNLSLSALPGDNTAGVTPSGPAPTRPASGPKLLTGGQTKGLSPGGLSREITSHQRSVTDNSRHIGQVHIHTTQGMTPEGLLEWQEMHA
SIO_010081: SOPEG_RS22345
subclass of: SO_0000673
so part of: SOPEG_RS22345
location: 107374..108363
location: region:107374-108363:1
so has part: feature:107374-108363:1:exon

WP_148296967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107374-108363:1:exon

SOPEG_RS00670
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00670
old locus tag: SOPEG_0128
so part of: sequence
location: 108360..108701
location: region:108360-108701:1
so has part: feature:108360-108701:1:exon
subclass of: SO_0000010

position:108360:1
position: 108360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108701:1
position: 108701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108360-108701:1:exon

SOPEG_RS00670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00670
old locus tag: SOPEG_0128
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012303694.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2590 family protein
translation: MSRYRDLLITDGDFTLNSGHEPKRCTDRVSITQDCAHALLESGLLTRLVAERSRTLRADLLMQVTLLLEEDERLIPGTVLVSEETPKRLWVTAQPYDFDRIEMSPRYDEQTRD
SIO_010081: SOPEG_RS00670
subclass of: SO_0000673
so part of: SOPEG_RS00670
location: 108360..108701
location: region:108360-108701:1
so has part: feature:108360-108701:1:exon

WP_025243922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108360-108701:1:exon

SOPEG_RS00675
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00675
old locus tag: SOPEG_0129
so part of: sequence
location: 108679..109863
location: region:108679-109863:1
so has part: feature:108679-109863:1:exon
subclass of: SO_0000010

position:108679:1
position: 108679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109863:1
position: 109863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108679-109863:1:exon

SOPEG_RS00675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00675
old locus tag: SOPEG_0129
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015386837.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: baseplate J/gp47 family protein
translation: MTNKPEIDYEQALKDSGMPTTEEAIHQAFAEQVSAAGLITNTSRMSPFWRLIQATVTTPVLWLKNALVSVVMKNMFLMTADGAFLDAFAAGVSLSRKPATAARGVVRFFKENAEAEVTVPAGTVIETERLNGTIYRLMTEADHTLGAGAESALVNVSAGQTGGGSNLAPGYYRILPHAVPGIAQVTTEEGWLLTPGADAESDDELRERCRNQYNLAGNYHTDAVYRSMIAAVAGLSIDRIFFEHDAPRGPGTSNAYLLLDSGVASGPFIQAVNAYITTQGHHGHGDDMRCFALPDTRHDLTVTLFVKNKTNFTLEALTTLTTGCETLIRCAFRENAAYDVKKTWPHARFSFSSLARSLHQTFGALDSVAFSLSDIVSQLDVPRLKTLTLEVKDA
SIO_010081: SOPEG_RS00675
subclass of: SO_0000673
so part of: SOPEG_RS00675
location: 108679..109863
location: region:108679-109863:1
so has part: feature:108679-109863:1:exon

WP_025243923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108679-109863:1:exon

SOPEG_RS00680
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00680
old locus tag: SOPEG_0130
so part of: sequence
location: 109856..110422
location: region:109856-110422:1
so has part: feature:109856-110422:1:exon
subclass of: SO_0000010

position:109856:1
position: 109856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110422:1
position: 110422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109856-110422:1:exon

SOPEG_RS00680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00680
old locus tag: SOPEG_0130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010847111.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail protein
translation: MRDFDKQLDQLHLPVWMDKGEPARLLRACHAFWRQVYGALTWSLRQLDATTCAESLLSVLAWQRDISRFDGEPLALFRLRVRYAFVNARDAGSVAGFIAIFARLGIGYVEIVERLDGLDWDVVRVRLSDGQLAGHPDLLRQIIRQYGRTCRRYQFEVINGTDLHLRAGWVGGDYQCYSAMLPPSREKN
SIO_010081: SOPEG_RS00680
subclass of: SO_0000673
so part of: SOPEG_RS00680
location: 109856..110422
location: region:109856-110422:1
so has part: feature:109856-110422:1:exon

WP_025243924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109856-110422:1:exon

SOPEG_RS00685
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00685
old locus tag: SOPEG_ps0131
so part of: sequence
location: 110422..111675
location: region:110422-111675:1
so has part: feature:110422-111675:1:exon
subclass of: SO_0000010

position:111675:1
position: 111675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110422-111675:1:exon

SOPEG_RS00685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00685
old locus tag: SOPEG_ps0131
inference: COORDINATES: protein motif:HMM:NF023985.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail protein
translation: MSQTIITTAFEQWKAQEAAEEKSVVLDEFVFAQVLGLDPAAPIDRNETLPAAEHIVHRQAVNKTGVVNQHAVVYAVTLGTEVGDFDFNWIGLANRASGTLAMIVHAPVQRKRATANGQQGNAITRSFLMAYTGAAVETGITTPAESWQIDFTARLSGLDERQRLINLDHYGAAAFFGDGFRVTRSGQRYTVTASIGYIGGLRAELTKNQPLTMRATPSRVWVDASLQGNVVSRWETVITFSLGEAKTDYVDESGFAHYVFALARIDEDGTVTDLRPAGSLSEQAANNAYLRKDDNLSALTDKAKSRKHLGLGKLATQDSEQAATLTRAGISALSNATDSEEDTKAATPKAVKTVQDNANRRLEKTQNLADLPDKGIARHHLNVHSKNDADGRYYQKTGGTVTGSMILLGRHIIFAGG
SIO_010081: SOPEG_RS00685
subclass of: SO_0000673
so part of: SOPEG_RS00685
location: 110422..111675
location: region:110422-111675:1
so has part: feature:110422-111675:1:exon

WP_025243925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110422-111675:1:exon

SOPEG_RS00690
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00690
old locus tag: SOPEG_0132
so part of: sequence
location: 111903..112826
location: region:111903-112826:1
so has part: feature:111903-112826:1:exon
subclass of: SO_0000010

position:111903:1
position: 111903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112826:1
position: 112826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111903-112826:1:exon

SOPEG_RS00690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00690
old locus tag: SOPEG_0132
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDMTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDAIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKIFGEGEWKVRQHGAERRRVWRKLHLAVDSATHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKTLLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS00690
subclass of: SO_0000673
so part of: SOPEG_RS00690
location: 111903..112826
location: region:111903-112826:1
so has part: feature:111903-112826:1:exon

WP_025243926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111903-112826:1:exon

SOPEG_RS00700
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00700
old locus tag: SOPEG_0134
so part of: sequence
location: 113343..113681
location: region:113343-113681:1
so has part: feature:113343-113681:1:exon
subclass of: SO_0000010

position:113343:1
position: 113343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113681:1
position: 113681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113343-113681:1:exon

SOPEG_RS00700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00700
old locus tag: SOPEG_0134
inference: COORDINATES: protein motif:HMM:NF014467.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tail fiber assembly protein
translation: MIDSYKKVGSLPDDLIDIDDKTYAKYCRNPPRGKTRGADSQGYPIWIDAPFMKQRRMDEATRAIAPLQDAVDLDMATDAEKAALLAWKKYRVLLNRVDITQVPDIDWPEAPA
SIO_010081: SOPEG_RS00700
subclass of: SO_0000673
so part of: SOPEG_RS00700
location: 113343..113681
location: region:113343-113681:1
so has part: feature:113343-113681:1:exon

WP_236851861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113343-113681:1:exon

SOPEG_RS00705
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00705
old locus tag: SOPEG_ps0135
so part of: sequence
location: 113907..114404
location: region:113907-114404:1
so has part: feature:113907-114404:1:exon
subclass of: SO_0000010

position:113907:1
position: 113907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114404:1
position: 114404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113907-114404:1:exon

SOPEG_RS00705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00705
old locus tag: SOPEG_ps0135
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSLLAAFSAVLPLPVLGQVSRMAQTAATQAITRMQLPPKASGGLPAPQPLSADTLRLAQRAKIMAEAKAEAASGANVAQLQAHLTALSDARQSAHEAIGQALGDLSQKSVNAWVFTGEGLAASLAANMQKEVPPPDAVMTLATLFAGEEVSALEAMVHDNHHIGP
SIO_010081: SOPEG_RS00705
subclass of: SO_0000673
so part of: SOPEG_RS00705
location: 113907..114404
location: region:113907-114404:1
so has part: feature:113907-114404:1:exon

WP_236851591.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113907-114404:1:exon

SOPEG_RS00710
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00710
old locus tag: SOPEG_ps0136
pseudo: true
so part of: sequence
location: 114379..114901
location: region:114379-114901:1
so has part: feature:114379-114901:1:exon
subclass of: SO_0000010

position:114379:1
position: 114379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114901:1
position: 114901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114379-114901:1:exon

SOPEG_RS00710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00710
old locus tag: SOPEG_ps0136
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000200792.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: SOPEG_RS00710
subclass of: SO_0000673
so part of: SOPEG_RS00710
location: 114379..114901
location: region:114379-114901:1
so has part: feature:114379-114901:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:114379-114901:1:exon

SOPEG_RS00715
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00715
old locus tag: SOPEG_ps0137
pseudo: true
so part of: sequence
location: 114906..116562
location: region:114906-116562:1
so has part: feature:114906-116562:1:exon
subclass of: SO_0000010

position:114906:1
position: 114906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116562:1
position: 116562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114906-116562:1:exon

SOPEG_RS00715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00715
old locus tag: SOPEG_ps0137
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005171191.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: SOPEG_RS00715
subclass of: SO_0000673
so part of: SOPEG_RS00715
location: 114906..116562
location: region:114906-116562:1
so has part: feature:114906-116562:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:114906-116562:1:exon

SOPEG_RS00720
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00720
old locus tag: SOPEG_0140
old locus tag: SOPEG_0141
so part of: sequence
location: 117375..117527
location: region:117375-117527:1
so has part: feature:117375-117527:1:exon
subclass of: SO_0000010

position:117375:1
position: 117375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117527:1
position: 117527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117375-117527:1:exon

SOPEG_RS00720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00720
old locus tag: SOPEG_0140
old locus tag: SOPEG_0141
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004704431.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hok/Gef family protein
translation: MPQKFAITTLVVICITLLVFTWITRKSLCEIHTRKGETEVATIMAYESVR
SIO_010081: SOPEG_RS00720
subclass of: SO_0000673
so part of: SOPEG_RS00720
location: 117375..117527
location: region:117375-117527:1
so has part: feature:117375-117527:1:exon

WP_200867878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117375-117527:1:exon

SOPEG_RS00725
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00725
old locus tag: SOPEG_ps0142
so part of: sequence
location: complement(117826..118068)
location: region:117826-118068:-1
so has part: feature:117826-118068:-1:exon
subclass of: SO_0000010

position:117826:-1
position: 117826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118068:-1
position: 118068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117826-118068:-1:exon

SOPEG_RS00725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00725
old locus tag: SOPEG_ps0142
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKKISVGYSTLSGRILAGHSTQEANTTRFTGKKYDVTDEAITAVTRKMLHREESIDVNFGDGLIFRLQINLCEDAFVSR
SIO_010081: SOPEG_RS00725
subclass of: SO_0000673
so part of: SOPEG_RS00725
location: complement(117826..118068)
location: region:117826-118068:-1
so has part: feature:117826-118068:-1:exon

WP_025243929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117826-118068:-1:exon

SOPEG_RS00730
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00730
old locus tag: SOPEG_ps0143
so part of: sequence
location: complement(118065..118493)
location: region:118065-118493:-1
so has part: feature:118065-118493:-1:exon
subclass of: SO_0000010

position:118065:-1
position: 118065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118493:-1
position: 118493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118065-118493:-1:exon

SOPEG_RS00730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00730
old locus tag: SOPEG_ps0143
inference: COORDINATES: protein motif:HMM:NF016343.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF551 domain-containing protein
translation: MIRAASHLKVRFIQQSLIDNEKVSEEVRVMHEAGVLADYACLETTIPQEDAVLLARFVLTSLDGKNENSDAENNGWIACSEQMPKDGRLLLVTGNGHIDIAYFDDGDCQGFLNGYVTHWMHLPDLPSVDTLLPNSAKTGGEA
SIO_010081: SOPEG_RS00730
subclass of: SO_0000673
so part of: SOPEG_RS00730
location: complement(118065..118493)
location: region:118065-118493:-1
so has part: feature:118065-118493:-1:exon

WP_025243930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118065-118493:-1:exon

SOPEG_RS00735
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00735
old locus tag: SOPEG_ps0144
pseudo: true
so part of: sequence
location: 118520..119444
location: region:118520-119444:1
so has part: feature:118520-119444:1:exon
subclass of: SO_0000010

position:118520:1
position: 118520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119444:1
position: 119444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118520-119444:1:exon

SOPEG_RS00735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00735
old locus tag: SOPEG_ps0144
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
SIO_010081: SOPEG_RS00735
subclass of: SO_0000673
so part of: SOPEG_RS00735
location: 118520..119444
location: region:118520-119444:1
so has part: feature:118520-119444:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:118520-119444:1:exon

SOPEG_RS00740
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00740
old locus tag: SOPEG_0145
so part of: sequence
location: complement(119716..120639)
location: region:119716-120639:-1
so has part: feature:119716-120639:-1:exon
subclass of: SO_0000010

position:119716:-1
position: 119716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120639:-1
position: 120639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119716-120639:-1:exon

SOPEG_RS00740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00740
old locus tag: SOPEG_0145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDLTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDSIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKIFGEGEWKVRQHGAERRRVWRKLHLAVDSATHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKILLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS00740
subclass of: SO_0000673
so part of: SOPEG_RS00740
location: complement(119716..120639)
location: region:119716-120639:-1
so has part: feature:119716-120639:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:119716-120639:-1:exon

SOPEG_RS29010
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS29010
old locus tag: SOPEG_ps0146
pseudo: true
so part of: sequence
location: complement(<120720..>120815)
location: region:120720-120815:-1
so has part: feature:120720-120815:-1:exon
subclass of: SO_0000010

position:120720:-1
position: 120720
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:120815:-1
position: 120815
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120720-120815:-1:exon

SOPEG_RS29010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS29010
old locus tag: SOPEG_ps0146
inference: COORDINATES: similar to AA sequence:RefSeq:WP_034524650.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: SOPEG_RS29010
subclass of: SO_0000673
so part of: SOPEG_RS29010
location: complement(<120720..>120815)
location: region:120720-120815:-1
so has part: feature:120720-120815:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:120720-120815:-1:exon

SOPEG_RS00745
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00745
old locus tag: SOPEG_0147
so part of: sequence
location: complement(121027..121467)
location: region:121027-121467:-1
so has part: feature:121027-121467:-1:exon
subclass of: SO_0000010

position:121027:-1
position: 121027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121467:-1
position: 121467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121027-121467:-1:exon

SOPEG_RS00745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00745
old locus tag: SOPEG_0147
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011411515.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1640 domain-containing protein
translation: MGQVAFDTQEFVETLESAGLPKDQAKAISIAVRKSHEVADVATKRDLEDVRKDLTIQIADIRKDMDARFEKNEAQMQARFEKLETQMQTRFEKTDVQIADARKETSTQIALLRKDVESISTWLLIKMAAMMTALLGVAVTLVKILI
SIO_010081: SOPEG_RS00745
subclass of: SO_0000673
so part of: SOPEG_RS00745
location: complement(121027..121467)
location: region:121027-121467:-1
so has part: feature:121027-121467:-1:exon

WP_025243931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121027-121467:-1:exon

SOPEG_RS23735
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS23735
so part of: sequence
location: 121987..122157
location: region:121987-122157:1
so has part: feature:121987-122157:1:exon
subclass of: SO_0000010

position:121987:1
position: 121987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122157:1
position: 122157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121987-122157:1:exon

SOPEG_RS23735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS23735
inference: COORDINATES: protein motif:HMM:NF018262.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0060567 - negative regulation of termination of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antiterminator Q family protein
translation: MRDIKYVLESWGAWVVNSNDSPIAKSLSGLIPHKIKSRKRCSDDDGICISNCMGLC
SIO_010081: SOPEG_RS23735
subclass of: SO_0000673
so part of: SOPEG_RS23735
location: 121987..122157
location: region:121987-122157:1
so has part: feature:121987-122157:1:exon

WP_081742887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121987-122157:1:exon

SOPEG_RS00750
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00750
old locus tag: SOPEG_0149
so part of: sequence
location: 122222..123145
location: region:122222-123145:1
so has part: feature:122222-123145:1:exon
subclass of: SO_0000010

position:122222:1
position: 122222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123145:1
position: 123145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122222-123145:1:exon

SOPEG_RS00750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00750
old locus tag: SOPEG_0149
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDLTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDSIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKIFGEGEWKVRQHGAERRRVWRKLHLAVDSATHEIICADLSLSGTTDAQELPGLINQTHRKIREASADSAYDTCYCHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKTLLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS00750
subclass of: SO_0000673
so part of: SOPEG_RS00750
location: 122222..123145
location: region:122222-123145:1
so has part: feature:122222-123145:1:exon

WP_025243932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122222-123145:1:exon

SOPEG_RS00755
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00755
pseudo: true
so part of: sequence
location: complement(123318..>123518)
location: region:123318-123518:-1
so has part: feature:123318-123518:-1:exon
subclass of: SO_0000010

position:123318:-1
position: 123318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123518:-1
position: 123518
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123318-123518:-1:exon

SOPEG_RS00755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00755
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002215636.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0060567 - negative regulation of termination of DNA-templated transcription [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: antiterminator Q family protein
SIO_010081: SOPEG_RS00755
subclass of: SO_0000673
so part of: SOPEG_RS00755
location: complement(123318..>123518)
location: region:123318-123518:-1
so has part: feature:123318-123518:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:123318-123518:-1:exon

SOPEG_RS00760
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00760
old locus tag: SOPEG_0150
so part of: sequence
location: complement(123580..124503)
location: region:123580-124503:-1
so has part: feature:123580-124503:-1:exon
subclass of: SO_0000010

position:123580:-1
position: 123580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124503:-1
position: 124503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123580-124503:-1:exon

SOPEG_RS00760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00760
old locus tag: SOPEG_0150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
translation: MAKQKFKIINWPAYNNALRQRGDLTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKHVFNLSLRALQGFVDAIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKIFGEGEWKVRQHGAERRRVWRKLHLAVDSATHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKILLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS00760
subclass of: SO_0000673
so part of: SOPEG_RS00760
location: complement(123580..124503)
location: region:123580-124503:-1
so has part: feature:123580-124503:-1:exon

WP_025243933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123580-124503:-1:exon

SOPEG_RS00765
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00765
old locus tag: SOPEG_ps0151
pseudo: true
so part of: sequence
location: 124738..125948
location: region:124738-125948:1
so has part: feature:124738-125948:1:exon
subclass of: SO_0000010

position:124738:1
position: 124738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125948:1
position: 125948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124738-125948:1:exon

SOPEG_RS00765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00765
old locus tag: SOPEG_ps0151
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS256-like element ISSoEn2 family transposase
SIO_010081: SOPEG_RS00765
subclass of: SO_0000673
so part of: SOPEG_RS00765
location: 124738..125948
location: region:124738-125948:1
so has part: feature:124738-125948:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:124738-125948:1:exon

SOPEG_RS00775
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00775
old locus tag: SOPEG_ps0152
so part of: sequence
location: 126018..126359
location: region:126018-126359:1
so has part: feature:126018-126359:1:exon
subclass of: SO_0000010

position:126018:1
position: 126018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126359:1
position: 126359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126018-126359:1:exon

SOPEG_RS00775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00775
old locus tag: SOPEG_ps0152
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQNIPSRQMREEIIATSLRDMLSAGKRGADFNPGGFADWYQNMRANGQLRLLAQHAPRELMSGLSDVYTVARAIQKAKANEITTGKLNEFVARFNRVLRKVTKWRRNTRNGQG
SIO_010081: SOPEG_RS00775
subclass of: SO_0000673
so part of: SOPEG_RS00775
location: 126018..126359
location: region:126018-126359:1
so has part: feature:126018-126359:1:exon

WP_025243936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126018-126359:1:exon

SOPEG_RS00780
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00780
old locus tag: SOPEG_0153
so part of: sequence
location: 126523..127446
location: region:126523-127446:1
so has part: feature:126523-127446:1:exon
subclass of: SO_0000010

position:126523:1
position: 126523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127446:1
position: 127446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126523-127446:1:exon

SOPEG_RS00780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00780
old locus tag: SOPEG_0153
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDLTVWLDESAIAAWTESIPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDSIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKVFGEGEWKVRQHGAERRRVWRKLHLAVDSVTHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYYERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKTLLGGHPSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS00780
subclass of: SO_0000673
so part of: SOPEG_RS00780
location: 126523..127446
location: region:126523-127446:1
so has part: feature:126523-127446:1:exon

WP_025243937.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126523-127446:1:exon

SOPEG_RS00785
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00785
old locus tag: SOPEG_ps0154
pseudo: true
so part of: sequence
location: complement(127617..>128750)
location: region:127617-128750:-1
so has part: feature:127617-128750:-1:exon
subclass of: SO_0000010

position:127617:-1
position: 127617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128750:-1
position: 128750
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127617-128750:-1:exon

SOPEG_RS00785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00785
old locus tag: SOPEG_ps0154
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS256-like element ISSoEn2 family transposase
SIO_010081: SOPEG_RS00785
subclass of: SO_0000673
so part of: SOPEG_RS00785
location: complement(127617..>128750)
location: region:127617-128750:-1
so has part: feature:127617-128750:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:127617-128750:-1:exon

SOPEG_RS00790
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00790
old locus tag: SOPEG_0155
so part of: sequence
location: 128830..129753
location: region:128830-129753:1
so has part: feature:128830-129753:1:exon
subclass of: SO_0000010

position:128830:1
position: 128830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129753:1
position: 129753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128830-129753:1:exon

SOPEG_RS00790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00790
old locus tag: SOPEG_0155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
translation: MAKQKFKIINWPAYNNALRQRGDMTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDAIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKIFGEGEWKVRQHGAERRRVWRKLHLAVDSATHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKTLLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS00790
subclass of: SO_0000673
so part of: SOPEG_RS00790
location: 128830..129753
location: region:128830-129753:1
so has part: feature:128830-129753:1:exon

WP_025243939.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128830-129753:1:exon

SOPEG_RS28135
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS28135
so part of: sequence
location: complement(129746..129898)
location: region:129746-129898:-1
so has part: feature:129746-129898:-1:exon
subclass of: SO_0000010

position:129746:-1
position: 129746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129898:-1
position: 129898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129746-129898:-1:exon

SOPEG_RS28135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS28135
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDEKLLQALANEQAKNLKTPEDLSHFDRLLALLNKSEICDDFLPIRAIVT
SIO_010081: SOPEG_RS28135
subclass of: SO_0000673
so part of: SOPEG_RS28135
location: complement(129746..129898)
location: region:129746-129898:-1
so has part: feature:129746-129898:-1:exon

WP_025243940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129746-129898:-1:exon

SOPEG_RS28570
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS28570
old locus tag: SOPEG_ps0156
pseudo: true
so part of: sequence
location: 130215..>130685
location: region:130215-130685:1
so has part: feature:130215-130685:1:exon
subclass of: SO_0000010

position:130215:1
position: 130215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130685:1
position: 130685
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130215-130685:1:exon

SOPEG_RS28570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS28570
old locus tag: SOPEG_ps0156
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001280399.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: phage tailspike protein
SIO_010081: SOPEG_RS28570
subclass of: SO_0000673
so part of: SOPEG_RS28570
location: 130215..>130685
location: region:130215-130685:1
so has part: feature:130215-130685:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:130215-130685:1:exon

SOPEG_RS00805
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00805
old locus tag: SOPEG_0158
so part of: sequence
location: 131005..131928
location: region:131005-131928:1
so has part: feature:131005-131928:1:exon
subclass of: SO_0000010

position:131005:1
position: 131005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131928:1
position: 131928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131005-131928:1:exon

SOPEG_RS00805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00805
old locus tag: SOPEG_0158
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDLTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDSIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKVFGEGEWKVRQHGAERRRVWRKLHLAVDSVTHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYYERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKTLLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS00805
subclass of: SO_0000673
so part of: SOPEG_RS00805
location: 131005..131928
location: region:131005-131928:1
so has part: feature:131005-131928:1:exon

WP_025243942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131005-131928:1:exon

SOPEG_RS23740
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS23740
old locus tag: SOPEG_ps0159
pseudo: true
so part of: sequence
location: complement(132427..133349)
location: region:132427-133349:-1
so has part: feature:132427-133349:-1:exon
subclass of: SO_0000010

position:132427:-1
position: 132427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133349:-1
position: 133349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132427-133349:-1:exon

SOPEG_RS23740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS23740
old locus tag: SOPEG_ps0159
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
SIO_010081: SOPEG_RS23740
subclass of: SO_0000673
so part of: SOPEG_RS23740
location: complement(132427..133349)
location: region:132427-133349:-1
so has part: feature:132427-133349:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:132427-133349:-1:exon

SOPEG_RS26925
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS26925
so part of: sequence
location: 133450..134370
location: region:133450-134370:1
so has part: feature:133450-134370:1:exon
subclass of: SO_0000010

position:133450:1
position: 133450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134370:1
position: 134370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133450-134370:1:exon

SOPEG_RS26925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS26925
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIVGANNNDFYNDLYLSNFLMVADSTCFKFGALRLLGRIESLNVEYCDIMGGVHSLTSDPGKTSGVRFSVFTSMYLDSATYSCEFNGINHSSLTDCWISGGRESGSSGAEFQSCHSFSMTGMRAYNCGSNAITFKSCNNFTVDKTIIGGNNKSSIPETPDVNFIGCDKFNVVNTHGTDVGNTNYGIRIASGCTAYTLMNNKFTERSAGLILEDDINSASRLVDGNPGYTTRSGGRASLPAGAKSVDVSHGLSVEPKINMVTIQQNGQTLTPLYVSSVSKDTFTVSTLQENQSDASFSWRVDATRSG
SIO_010081: SOPEG_RS26925
subclass of: SO_0000673
so part of: SOPEG_RS26925
location: 133450..134370
location: region:133450-134370:1
so has part: feature:133450-134370:1:exon

WP_148296969.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133450-134370:1:exon

SOPEG_RS00825
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00825
old locus tag: SOPEG_0160
so part of: sequence
location: 134757..135680
location: region:134757-135680:1
so has part: feature:134757-135680:1:exon
subclass of: SO_0000010

position:134757:1
position: 134757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135680:1
position: 135680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134757-135680:1:exon

SOPEG_RS00825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00825
old locus tag: SOPEG_0160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDLTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDSIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKVFGEGEWKVRQHGAERRRVWRKLHLAVDSVTHEIISADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHYALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHPSGNNDTWKKKVGYHRRSLAETAMFRFKTLLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS00825
subclass of: SO_0000673
so part of: SOPEG_RS00825
location: 134757..135680
location: region:134757-135680:1
so has part: feature:134757-135680:1:exon

WP_025243945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134757-135680:1:exon

SOPEG_RS00830
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: kdsD
locus tag: SOPEG_RS00830
old locus tag: SOPEG_0161
so part of: sequence
location: complement(135823..136809)
location: region:135823-136809:-1
so has part: feature:135823-136809:-1:exon
subclass of: SO_0000010

position:135823:-1
position: 135823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136809:-1
position: 136809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135823-136809:-1:exon

SOPEG_RS00830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: kdsD
locus tag: SOPEG_RS00830
old locus tag: SOPEG_0161
EC number: 5.3.1.13
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312103.1
GO function: GO:0097367 - carbohydrate derivative binding [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]
GO process: GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arabinose-5-phosphate isomerase KdsD
translation: MSQNTLAPAFDFIAAGKQVLAIERESLAQLDQYINDDFRRACEALFRCTGKVVVMGMGKSGHIGRKLAATFASTGTPAFFVHPGEASHGDLGMVSPQDIVIALSNSGESHEVLALIPVLKRLRIPLICMTGKPDSTMRKAAEIHLCVHVPEEACPLGLAPTASTTAALVMGDALAVALLRARGFTAEDFALSHPGGALGRKLLLRVSDIMHSGDDIPQTARTASLRDALLEITRKNLGMTVICDAQNVIAGIFTDGDLRRVFDMGIDLNRARIADVMTPGGGRVAPDMLAVEALNLMQARNITSLLVAQDDHLIGVVHMHDMLRAGVV
SIO_010081: SOPEG_RS00830
subclass of: SO_0000673
so part of: SOPEG_RS00830
location: complement(135823..136809)
location: region:135823-136809:-1
so has part: feature:135823-136809:-1:exon

WP_025246990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135823-136809:-1:exon

SOPEG_RS00835
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00835
old locus tag: SOPEG_0162
so part of: sequence
location: complement(136843..137793)
location: region:136843-137793:-1
so has part: feature:136843-137793:-1:exon
subclass of: SO_0000010

position:136843:-1
position: 136843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137793:-1
position: 137793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136843-137793:-1:exon

SOPEG_RS00835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00835
old locus tag: SOPEG_0162
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005162457.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: calcium/sodium antiporter
translation: MLFATSLLIIGLILLVYGADRLVYSAAVLSRSLGVAPWLVGCTIVAFGTSLPELLVSVTAALNNQIDMAVGNILGSNIINIMLIVGGAAFIRPVTFRSDIVRRELPLLPLITLLCGLLLADHSLGRLDGVLLLAAGYLLIIVTISRLALHEGSDTLTREQLAELPQDSNNTVAVLWLVLAFIIMPISARMVSDNASVLARYFGLSDLIVGLTVLAIGTSLPELATLVAGALKGENDIALGNVIGSNIFNSVIVLGVPALLPPGPFNPDAFARDYWVMLVASIILAALCLRKRRRINRLSGTLLVCGFIAYLAVLLI
SIO_010081: SOPEG_RS00835
subclass of: SO_0000673
so part of: SOPEG_RS00835
location: complement(136843..137793)
location: region:136843-137793:-1
so has part: feature:136843-137793:-1:exon

WP_038468016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136843-137793:-1:exon

SOPEG_RS00840
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: mlaF
locus tag: SOPEG_RS00840
old locus tag: SOPEG_0163
so part of: sequence
location: 138042..138851
location: region:138042-138851:1
so has part: feature:138042-138851:1:exon
subclass of: SO_0000010

position:138042:1
position: 138042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138851:1
position: 138851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138042-138851:1:exon

SOPEG_RS00840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: mlaF
locus tag: SOPEG_RS00840
old locus tag: SOPEG_0163
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410069.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospholipid ABC transporter ATP-binding protein MlaF
translation: MNQSDNLVEIRGLSFCRGDRVIFDDISMQFPRGKVTAIMGPSGIGKTTLLRLLGGQLPPDSGEIWVDGDNIPTLSRRRLYEVRKKISMLFQSGALFTDINVFENVAFPLRRHTRLPEPVLRSTVLMKLEAVGLRGAAALMPAELSGGMARRAALARAIALDPELIMFDEPFVGQDPITMGVLVKLIDELNHALGVTCIVVSHDVPEVLSIADYAYIVAEQHVVAEGTPASLCDNQDLRVRQFLDGIADGPVPFNIPAEDYQTQLLGAGS
SIO_010081: SOPEG_RS00840
subclass of: SO_0000673
so part of: SOPEG_RS00840
location: 138042..138851
location: region:138042-138851:1
so has part: feature:138042-138851:1:exon

WP_025243946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138042-138851:1:exon

SOPEG_RS00845
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: mlaE
locus tag: SOPEG_RS00845
old locus tag: SOPEG_0164
so part of: sequence
location: 138860..139642
location: region:138860-139642:1
so has part: feature:138860-139642:1:exon
subclass of: SO_0000010

position:138860:1
position: 138860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139642:1
position: 139642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138860-139642:1:exon

SOPEG_RS00845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: mlaE
locus tag: SOPEG_RS00845
old locus tag: SOPEG_0164
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312100.1
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipid asymmetry maintenance ABC transporter permease subunit MlaE
translation: MVLEAIASFGRRGISICHGFGRAGVMLFNVLIGKPALREQWPLLVKQLYGVGVLSLVIIMVSGLFIGMVLGLQGYIILTTYSAESSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLTAIFVAVGIWGGTVVGVEWKDIDSGFFWSAMQGAVDWRQDLVNCVIKSVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHVSLAVLGLDFVLTALMFGN
SIO_010081: SOPEG_RS00845
subclass of: SO_0000673
so part of: SOPEG_RS00845
location: 138860..139642
location: region:138860-139642:1
so has part: feature:138860-139642:1:exon

WP_025243947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138860-139642:1:exon

SOPEG_RS00850
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: mlaD
locus tag: SOPEG_RS00850
old locus tag: SOPEG_0165
so part of: sequence
location: 139647..140168
location: region:139647-140168:1
so has part: feature:139647-140168:1:exon
subclass of: SO_0000010

position:139647:1
position: 139647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140168:1
position: 140168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139647-140168:1:exon

SOPEG_RS00850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: mlaD
locus tag: SOPEG_RS00850
old locus tag: SOPEG_0165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410071.1
GO process: GO:0015914 - phospholipid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane lipid asymmetry maintenance protein MlaD
translation: MQTKKSEIWVGAFMIIALCAIVFLCLKVADIRSVSNAATYRISASFDNIGGLKVRSPVRVGGVVIGRVADITLDPQTYTPKVTMDIEQTYNHIPDTSSLAIRTSGLLGEQYLALNIGFEDPEMGTSILKGGGVIQDTKSAIVLEDLIGQFLYKSGGDNNSAGAAQSNGTAAGQ
SIO_010081: SOPEG_RS00850
subclass of: SO_0000673
so part of: SOPEG_RS00850
location: 139647..140168
location: region:139647-140168:1
so has part: feature:139647-140168:1:exon

WP_025243948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139647-140168:1:exon

SOPEG_RS00855
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: mlaC
locus tag: SOPEG_RS00855
old locus tag: SOPEG_0166
so part of: sequence
location: 140317..140952
location: region:140317-140952:1
so has part: feature:140317-140952:1:exon
subclass of: SO_0000010

position:140317:1
position: 140317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140952:1
position: 140952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140317-140952:1:exon

SOPEG_RS00855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: mlaC
locus tag: SOPEG_RS00855
old locus tag: SOPEG_0166
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012883044.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospholipid-binding protein MlaC
translation: MFKRLLMVALLVIAPLTQAADQTNPYHLMNDAASKTFTRLKNEQGKIHQDPNYLRTVVREEQLPYVQVKYAGALVLGRYYREATPAQRDAYFKAFQAYLEQAYGQALALYSNQTYQIAPEKPLGDATIVAIRVTIIDQGGRPPVRLDFQWRKNSVSGNWQAYDMIAEGVSMITTKQNEWASTLRTKGIDGLTQQLQAAASQPITLDKQRNG
SIO_010081: SOPEG_RS00855
subclass of: SO_0000673
so part of: SOPEG_RS00855
location: 140317..140952
location: region:140317-140952:1
so has part: feature:140317-140952:1:exon

WP_025243949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140317-140952:1:exon

SOPEG_RS00860
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: mlaB
locus tag: SOPEG_RS00860
old locus tag: SOPEG_0167
so part of: sequence
location: 140945..141253
location: region:140945-141253:1
so has part: feature:140945-141253:1:exon
subclass of: SO_0000010

position:140945:1
position: 140945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141253:1
position: 141253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140945-141253:1:exon

SOPEG_RS00860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: mlaB
locus tag: SOPEG_RS00860
old locus tag: SOPEG_0167
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009114744.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipid asymmetry maintenance protein MlaB
translation: MADELSWHTQGQTLILRGELDRDTLPTLWQQRQGLLDGIRFLDVSGLKRVDSAGVALMLHFYHQQQQRGATLALTGVTDRLRTLIALYKLQAILPCAPSASV
SIO_010081: SOPEG_RS00860
subclass of: SO_0000673
so part of: SOPEG_RS00860
location: 140945..141253
location: region:140945-141253:1
so has part: feature:140945-141253:1:exon

WP_025243950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140945-141253:1:exon

SOPEG_RS00865
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: ibaG
locus tag: SOPEG_RS00865
old locus tag: SOPEG_0168
so part of: sequence
location: 141380..141634
location: region:141380-141634:1
so has part: feature:141380-141634:1:exon
subclass of: SO_0000010

position:141380:1
position: 141380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141634:1
position: 141634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141380-141634:1:exon

SOPEG_RS00865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: ibaG
locus tag: SOPEG_RS00865
old locus tag: SOPEG_0168
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229039.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BolA family iron metabolism protein IbaG
translation: METSEIKAVLMEALKLDEAHVSGDGSHFQVIAVSAQFTGMSRVKKQQTIYAPLMEYISDNRIHALSIKAYTPEEWQRDRKLNGF
SIO_010081: SOPEG_RS00865
subclass of: SO_0000673
so part of: SOPEG_RS00865
location: 141380..141634
location: region:141380-141634:1
so has part: feature:141380-141634:1:exon

WP_025243951.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141380-141634:1:exon

SOPEG_RS00870
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: murA
locus tag: SOPEG_RS00870
old locus tag: SOPEG_0169
so part of: sequence
location: 141686..142945
location: region:141686-142945:1
so has part: feature:141686-142945:1:exon
subclass of: SO_0000010

position:141686:1
position: 141686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142945:1
position: 142945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141686-142945:1:exon

SOPEG_RS00870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: murA
locus tag: SOPEG_RS00870
old locus tag: SOPEG_0169
EC number: 2.5.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312095.1
GO function: GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylglucosamine 1-carboxyvinyltransferase
translation: MDKFRVQGPTRLSGEVTISGAKNAALPILFVALLAEEPVEIQNVPKLKDIDTTMKLLGQLGARVERNGSVHVDASGVNVYCAPYELVKTMRASIWALGPLVARFGQGQVSLPGGCTIGARPVDLHISGLEQLGATIKLEEGYVKASMDGRLRGAHIVMDKVSVGATVTIMSAATLATGTTIIENAAREPEIVDTANFLITLGAKISGAGTDKITVEGVKRLGGGVYRVLSDRIETGTFLVAAAISRGRVVCHATRPDTLDAVLAKLREAGADIAVGDDWISLDMHGQRPKAVTVRTAPHPGFPTDMQAQFSLLNLVADGTGVITETIFENRFMHVPELIRMGAHAEIESNTVICHGVATLSGAQVMATDLRASASLVLAGCIAEGVTVVDRIYHIDRGYDCIEEKLRRMGANIERISGE
SIO_010081: SOPEG_RS00870
subclass of: SO_0000673
so part of: SOPEG_RS00870
location: 141686..142945
location: region:141686-142945:1
so has part: feature:141686-142945:1:exon

WP_025243952.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141686-142945:1:exon

SOPEG_RS00875
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: degS
locus tag: SOPEG_RS00875
old locus tag: SOPEG_0170
so part of: sequence
location: complement(143061..144122)
location: region:143061-144122:-1
so has part: feature:143061-144122:-1:exon
subclass of: SO_0000010

position:143061:-1
position: 143061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144122:-1
position: 144122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143061-144122:-1:exon

SOPEG_RS00875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: degS
locus tag: SOPEG_RS00875
old locus tag: SOPEG_0170
EC number: 3.4.21.107
inference: COORDINATES: similar to AA sequence:RefSeq:NP_462259.1
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane-stress sensor serine endopeptidase DegS
translation: MLLKLLRAVIIGFIVAALLLALVPTLRSTTGQLLHRADNIAIARSPSVIIRGCAAPAVVYVYNRSMNSSAHNQLEIRTLGSGVIMNQKGYLLTNKHVINDAEQIIVALQDGRVYEALLVGSDSLTDLAVLKIDANNLPVISINPDRQPHIGDVVMAIGNPYNLGQTITQGIISATGRIGLSPSGRQNFLQTDASINHGNSGGALINTLGELVGINTLSFDKSNNGETPEGIGFAIPTALATKVMNKLIRDGRVIRGYIGIGGREVASMHNGGGLDRIQGIIVNEVTPGGPAAQAGIQVEDVILSVNHKPAISAIETMDQVAEIRPGSRIPVEILRNGKKLTVEVTIQEYPASN
SIO_010081: SOPEG_RS00875
subclass of: SO_0000673
so part of: SOPEG_RS00875
location: complement(143061..144122)
location: region:143061-144122:-1
so has part: feature:143061-144122:-1:exon

WP_025243953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143061-144122:-1:exon

SOPEG_RS00880
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00880
old locus tag: SOPEG_0171
so part of: sequence
location: complement(144209..145579)
location: region:144209-145579:-1
so has part: feature:144209-145579:-1:exon
subclass of: SO_0000010

position:144209:-1
position: 144209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145579:-1
position: 145579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144209-145579:-1:exon

SOPEG_RS00880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00880
old locus tag: SOPEG_0171
EC number: 3.4.21.107
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410077.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0005515 - protein binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]; GO:0006950 - response to stress [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine endoprotease DegQ
translation: MKTTPLFSALALSIGLSLLPFLAPRAALPAEVAGQSMPSLAPMLTKVLPAVVSVHVEGSQPVRRPTLPKEFKYFFGPDTPGGNGGTRPFEGLGSGVIINAAKGYVITNNHVVNGADKIKVQLNDGREFDAKLVGHDEQTDLALLQLPSPKNLSEVTMADSDVLKVGDFAVAVGNPFGLGQTVTSGIVSALGRSGLNLEGLENFIQTDASINRGNSGGALVNLNGELIGINTAILAPGGGNIGIGFAIPSNIVKNLSQQLIEYGEVKRGQLGIKGTELTADIAKAFNIDAQRGAFIREVLPNSAAAKAGIKAGDIIVSVENKPIQSFAELRVKVGTTAPGKTVKLGLLRNGKPQTASVVLDDSASATTSEEILTPALQGTSLSNGQLKDGTKGVQVEDVVKDSPAAAIGLQKGDVIVGLNRERVQSLAQLRKVLEAKPAVMALNIVRGDASIFLLLR
SIO_010081: SOPEG_RS00880
subclass of: SO_0000673
so part of: SOPEG_RS00880
location: complement(144209..145579)
location: region:144209-145579:-1
so has part: feature:144209-145579:-1:exon

WP_025243954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144209-145579:-1:exon

SOPEG_RS00885
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: zapG
locus tag: SOPEG_RS00885
old locus tag: SOPEG_0172
so part of: sequence
location: complement(145725..146129)
location: region:145725-146129:-1
so has part: feature:145725-146129:-1:exon
subclass of: SO_0000010

position:145725:-1
position: 145725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146129:-1
position: 146129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145725-146129:-1:exon

SOPEG_RS00885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: zapG
locus tag: SOPEG_RS00885
old locus tag: SOPEG_0172
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005975485.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Z-ring associated protein ZapG
translation: MTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQTLQHELEKSKAELDEYREELTSHFARSAELLDNMADDYRQLYQHMAKSSNSLLPDQRREDNPFRYRLTEAEADNDQIPAEMQPRDYPESASGLLRTTRGLRK
SIO_010081: SOPEG_RS00885
subclass of: SO_0000673
so part of: SOPEG_RS00885
location: complement(145725..146129)
location: region:145725-146129:-1
so has part: feature:145725-146129:-1:exon

WP_025243955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145725-146129:-1:exon

SOPEG_RS00890
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: zapE
locus tag: SOPEG_RS00890
old locus tag: SOPEG_0173
so part of: sequence
location: 146340..147479
location: region:146340-147479:1
so has part: feature:146340-147479:1:exon
subclass of: SO_0000010

position:146340:1
position: 146340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147479:1
position: 147479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146340-147479:1:exon

SOPEG_RS00890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: zapE
locus tag: SOPEG_RS00890
old locus tag: SOPEG_0173
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002220218.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0051301 - cell division [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division protein ZapE
translation: MQATSPLSLYQQMLAQGEYQPDDVQAAAIARLDRIHQQLGAAQNTAASAPSGLLRLLGKKWLGKGERATDEPVQGLYMWGGVGRGKTWLMDLFYRSLPGERKLRLHFHRFMLRVHEEMTRLQGHQDPLEIIADGFKAETDVLCFDEFFVTDITDAMLLGTLMQALFARGITLVATSNIPLDDLYRNGLQRARFLPAIELIKRHCEVMNVDAGIDYRLRTLTQANLWLSPLGGETDRAMARMFSALAGKHLALEGEAPALEINHRPLPTLGVTDGVVALDFAELCGGARSQNDYIVLSERFHSVLLHNVRPMSSDEENTTRRFLALVDEFYERHVKLVVAASVPMAALYQGQLLRFEYQRYLSRLQEMQSEEYLRLAHQP
SIO_010081: SOPEG_RS00890
subclass of: SO_0000673
so part of: SOPEG_RS00890
location: 146340..147479
location: region:146340-147479:1
so has part: feature:146340-147479:1:exon

WP_025243956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146340-147479:1:exon

SOPEG_RS00895
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rplM
locus tag: SOPEG_RS00895
old locus tag: SOPEG_0174
so part of: sequence
location: 147691..148119
location: region:147691-148119:1
so has part: feature:147691-148119:1:exon
subclass of: SO_0000010

position:147691:1
position: 147691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148119:1
position: 148119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147691-148119:1:exon

SOPEG_RS00895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rplM
locus tag: SOPEG_RS00895
old locus tag: SOPEG_0174
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L13
translation: MKTFTAKPETVKRDWYVVDAEGKTLGRLATELARRLRGKHKAEYTPHVDTGDYLIVLNADKVAVTGNKRNDKIYYHYTGHVGGIKQATFEEMIARRPERVIEIAVKGMLPKGPLGRAMFRKLKVYAGTEHNHAAQQPQVLDI
SIO_010081: SOPEG_RS00895
subclass of: SO_0000673
so part of: SOPEG_RS00895
location: 147691..148119
location: region:147691-148119:1
so has part: feature:147691-148119:1:exon

WP_011410080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147691-148119:1:exon

SOPEG_RS00900
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rpsI
locus tag: SOPEG_RS00900
old locus tag: SOPEG_0175
so part of: sequence
location: 148135..148527
location: region:148135-148527:1
so has part: feature:148135-148527:1:exon
subclass of: SO_0000010

position:148135:1
position: 148135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148527:1
position: 148527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148135-148527:1:exon

SOPEG_RS00900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rpsI
locus tag: SOPEG_RS00900
old locus tag: SOPEG_0175
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S9
translation: MAENQYYGTGRRKSSSARVFVKAGSGNIVINQRSLDQYFGRETARMVVRQPLELVDMVGKLDLYITVKGGGISGQAGAIRHGITRALMEYDETLRADLRKAGFVTRDARQVERKKVGLRKARRRPQFSKR
SIO_010081: SOPEG_RS00900
subclass of: SO_0000673
so part of: SOPEG_RS00900
location: 148135..148527
location: region:148135-148527:1
so has part: feature:148135-148527:1:exon

WP_011410081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148135-148527:1:exon

SOPEG_RS00905
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: sspA
locus tag: SOPEG_RS00905
old locus tag: SOPEG_0176
so part of: sequence
location: 148856..149497
location: region:148856-149497:1
so has part: feature:148856-149497:1:exon
subclass of: SO_0000010

position:148856:1
position: 148856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149497:1
position: 149497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148856-149497:1:exon

SOPEG_RS00905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: sspA
locus tag: SOPEG_RS00905
old locus tag: SOPEG_0176
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005162411.1
GO function: GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006749 - glutathione metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: stringent starvation protein SspA
translation: MAVAANKRSVMTLFSGTTDIFSHQVRIVLAEKGVSVEIEQVEMDNLPQDLIDLNPYRTVPTLVDRELTLYESRIIMEYLDERFPHPPLMPVYPVARGTSRLMMHRIENDWYTLMRKIEQSSGSEADNVRRQLREELLAVAPVFNEAPFFMSEEFSLVDCYLTPLLWRLPQLGIELAGAGAKELKGYMTRVFERDAFLASLTEAEREMRLQIRG
SIO_010081: SOPEG_RS00905
subclass of: SO_0000673
so part of: SOPEG_RS00905
location: 148856..149497
location: region:148856-149497:1
so has part: feature:148856-149497:1:exon

WP_025243957.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148856-149497:1:exon

SOPEG_RS00910
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: sspB
locus tag: SOPEG_RS00910
old locus tag: SOPEG_0177
so part of: sequence
location: 149502..149981
location: region:149502-149981:1
so has part: feature:149502-149981:1:exon
subclass of: SO_0000010

position:149502:1
position: 149502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149981:1
position: 149981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149502-149981:1:exon

SOPEG_RS00910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: sspB
locus tag: SOPEG_RS00910
old locus tag: SOPEG_0177
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012908489.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ClpXP protease specificity-enhancing factor
translation: MEVTQLSPRRPYLLRAFYEWLLDNQLTPHLVVDVNVDGVMVPMEFARDGQIVLNIAPRAVANLALGNDEVQFNARFSGVPRQVVVPMAAVLAIYARENGAGTMFEPEVADDDSAEDPTTETVMSVIDGDRPDNAQADDPEDEPPTPPRGGGRLSLRVVK
SIO_010081: SOPEG_RS00910
subclass of: SO_0000673
so part of: SOPEG_RS00910
location: 149502..149981
location: region:149502-149981:1
so has part: feature:149502-149981:1:exon

WP_025243958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149502-149981:1:exon

SOPEG_RS00915
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00915
old locus tag: SOPEG_0178
so part of: sequence
location: complement(150146..151564)
location: region:150146-151564:-1
so has part: feature:150146-151564:-1:exon
subclass of: SO_0000010

position:150146:-1
position: 150146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151564:-1
position: 151564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150146-151564:-1:exon

SOPEG_RS00915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00915
old locus tag: SOPEG_0178
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MSQNVYQFIDLQRVDPPKKPLKVRKIEFVEIYEPFSDSQSKAQADRCLSCGNPYCEWKCPVHNYIPNWLKLANEGRIIEAAELSHQTNSLPEVCGRVCPQDRLCEGSCTLNDEFGAVTIGNIERYINDKAIEMGWKPSVANVVPTGKRVAIVGAGPAGLACADVLALNGVQAVVFDRHPEIGGLLTFGIPAFKLEKEVMIKRREIFSDMGIEFRLNTEIGKDVQLSDLLGEYDAVFLGVGTYQSMRGGLDNEDAPGVYDALPFLVANTRELMGFGNPAEATYVNMSGKRVVVLGGGDTAMDCVRTSIRHGASRVVCAYRRDEENMPGSRREVKNSREEVVEFMFNLQPVSIEVDAEGRTCGVKMVRTAMSAPDAHGRRRAEIVTGSEHILDADAVVVAFGFRPHHMSWLADFSVELDSQGRIMAPEHGAAAFQTSNPKIFAGGDAVRGSDLVVTAIAEGRKAAEGIMDYLEV
SIO_010081: SOPEG_RS00915
subclass of: SO_0000673
so part of: SOPEG_RS00915
location: complement(150146..151564)
location: region:150146-151564:-1
so has part: feature:150146-151564:-1:exon

WP_025243959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150146-151564:-1:exon

SOPEG_RS00920
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: gltB
locus tag: SOPEG_RS00920
old locus tag: SOPEG_ps0179
pseudo: true
so part of: sequence
location: complement(151575..156031)
location: region:151575-156031:-1
so has part: feature:151575-156031:-1:exon
subclass of: SO_0000010

position:151575:-1
position: 151575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156031:-1
position: 156031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151575-156031:-1:exon

SOPEG_RS00920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: gltB
locus tag: SOPEG_RS00920
old locus tag: SOPEG_ps0179
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO process: GO:0006537 - glutamate biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glutamate synthase large subunit
SIO_010081: SOPEG_RS00920
subclass of: SO_0000673
so part of: SOPEG_RS00920
location: complement(151575..156031)
location: region:151575-156031:-1
so has part: feature:151575-156031:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:151575-156031:-1:exon

SOPEG_RS00925
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00925
old locus tag: SOPEG_ps0180
pseudo: true
so part of: sequence
location: 156724..157666
location: region:156724-157666:1
so has part: feature:156724-157666:1:exon
subclass of: SO_0000010

position:156724:1
position: 156724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157666:1
position: 157666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156724-157666:1:exon

SOPEG_RS00925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00925
old locus tag: SOPEG_ps0180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007902691.1
GO function: GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
note: This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein.; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: TIGR01212 family radical SAM protein
SIO_010081: SOPEG_RS00925
subclass of: SO_0000673
so part of: SOPEG_RS00925
location: 156724..157666
location: region:156724-157666:1
so has part: feature:156724-157666:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:156724-157666:1:exon

SOPEG_RS00930
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: arcB
locus tag: SOPEG_RS00930
old locus tag: SOPEG_0181
so part of: sequence
location: 157964..160306
location: region:157964-160306:1
so has part: feature:157964-160306:1:exon
subclass of: SO_0000010

position:157964:1
position: 157964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160306:1
position: 160306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157964-160306:1:exon

SOPEG_RS00930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: arcB
locus tag: SOPEG_RS00930
old locus tag: SOPEG_0181
EC number: 2.7.13.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019453121.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aerobic respiration two-component sensor histidine kinase ArcB
translation: MKQIRLLAQYYVDLMVKLGLVRFSLLLASALVVLAMIVQMAVTMVLRGEVESIDVVRSIFFGLLITPWAVYFLSVVVEQLEASRQRLSRLVGKLEEMRNRDLQLNAQLQNNIAQLNQEMADREKAEEARRGAMEKLTEEMARREQAQVELEQQSSLLRSFLDASPDLVYYRNENKEFSGCNRATELLTGKSEKQLVGLTPREVYSPEIAEKVIETDEKVFRHNVSLTYEQWLEYPDGRKACFELRKVPFYDRIGKRHGLMGFGRDITERKRYQDALESASREKTTFISTISHELRTPLNGIVGLSRILLDTQLTQEQHNYLKTIHVSAVTLGYIFNDIIEMDKLERRKVRLDNQPLDFTDFLMDLENLSGLLVQPKGLKLVMAPHQPLPRSIIADGTRLRQILWNLIGNAVKFTRQGEIVIHIWREQQDRLCFDVQDSGIGIPEEEQEKIFAMYYQVKGQHGGKPATGTGIGLAVSKRLAQAMGGDITVKSQPGQGSCFTLSIVAPEVAQVQEQVEDEEAMPLPALNVLLVEDIELNVLVARSVLEKLGSSVEVVMTGKDALAMFDPDEFDLVLLDIQLPDMTGLDIASQLKSRYQGRHMPPLIALTANVLKDKKEYQAAGMDDVLSKPLEIAALTQVIKTFWDHADSAAVVAPAEPAAVDKNRQVLDTAMLEQYLELVGLSLITQSLAMFEKMMPGYLVILDSNMTARDRQGIAEEGHKIKGAAGSVGLRHLQQLAQQIQNPELPAWWDNVQEWIDELKHEWRHDVQTLRDWVQLAEKK
SIO_010081: SOPEG_RS00930
subclass of: SO_0000673
so part of: SOPEG_RS00930
location: 157964..160306
location: region:157964-160306:1
so has part: feature:157964-160306:1:exon

WP_025243960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157964-160306:1:exon

SOPEG_RS00935
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: elbB
locus tag: SOPEG_RS00935
old locus tag: SOPEG_0182
so part of: sequence
location: 160538..161191
location: region:160538-161191:1
so has part: feature:160538-161191:1:exon
subclass of: SO_0000010

position:160538:1
position: 160538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161191:1
position: 161191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160538-161191:1:exon

SOPEG_RS00935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: elbB
locus tag: SOPEG_RS00935
old locus tag: SOPEG_0182
EC number: 4.2.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010280199.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isoprenoid biosynthesis glyoxalase ElbB
translation: MKRIGVVLRGCGVNDGSEIHEAVLTLLAIDRAGAGALCFAPDKPQLQVINHLSGEPCDERRNVLVEAARIARGHIQPLSAASADELDALIVPGGFGVAKNLSNLAQTGADCEVDAELARLVQAMHEKRKPLGFICIAPALLPKILAVPLRLTLGTDVDAAEMVDDMGAIHVTCPVDDIVIDGDNNIITTPAYMQETSIAEVAKGIDKLMARVLEFIP
SIO_010081: SOPEG_RS00935
subclass of: SO_0000673
so part of: SOPEG_RS00935
location: 160538..161191
location: region:160538-161191:1
so has part: feature:160538-161191:1:exon

WP_025243961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160538-161191:1:exon

SOPEG_RS00940
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: mtgA
locus tag: SOPEG_RS00940
old locus tag: SOPEG_0183
so part of: sequence
location: 161188..161865
location: region:161188-161865:1
so has part: feature:161188-161865:1:exon
subclass of: SO_0000010

position:161188:1
position: 161188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161865:1
position: 161865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161188-161865:1:exon

SOPEG_RS00940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: mtgA
locus tag: SOPEG_RS00940
old locus tag: SOPEG_0183
EC number: 2.4.1.129
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004948467.1
GO component: GO:0016020 - membrane [Evidence IEA]; GO:0009274 - peptidoglycan-based cell wall [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: monofunctional biosynthetic peptidoglycan transglycosylase
translation: MRGRAGDRSLLRRVWRWLLRGCLALVALWLLAIVLFAFVPVPFTAVMAERQIDHWLRGDFRYAAHSRWVPMRAIAPPMALAVMAAEDQKFSRHWGFDITAIRDALNHNARSRHIRGASTLSQQTAKNLLLWEGRSWLRKGLETGLTLGIEGVWTKRRILTVYLNIAEFGEGIFGVEAALLEAVLPNPLSLSADAPSVYVRQRQRWILRQMRQMGGDAYLAQTGLR
SIO_010081: SOPEG_RS00940
subclass of: SO_0000673
so part of: SOPEG_RS00940
location: 161188..161865
location: region:161188-161865:1
so has part: feature:161188-161865:1:exon

WP_025243962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161188-161865:1:exon

SOPEG_RS00945
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: dolP
locus tag: SOPEG_RS00945
old locus tag: SOPEG_0184
so part of: sequence
location: complement(161899..162474)
location: region:161899-162474:-1
so has part: feature:161899-162474:-1:exon
subclass of: SO_0000010

position:161899:-1
position: 161899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162474:-1
position: 162474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161899-162474:-1:exon

SOPEG_RS00945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: dolP
locus tag: SOPEG_RS00945
old locus tag: SOPEG_0184
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012822116.1
GO process: GO:0006970 - response to osmotic stress [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: division/outer membrane stress-associated lipid-binding lipoprotein
translation: MKVHTPLILLCTALMLQGCVGAVVVGTAAVATKTATDPRTVGTQVDDGTLEARVANALAKDQQLKKEARIVNTAYQGKVLLTGQAPTPELAERAKQIAMGVDGATEVYNEIRQGQPVSLGRASMDTWITTKIRSQLLASDAVKSSNVKVTTENGEVFLLGLVTNAEGKAVAEVASKVNGVKHVTTAFTYLQ
SIO_010081: SOPEG_RS00945
subclass of: SO_0000673
so part of: SOPEG_RS00945
location: complement(161899..162474)
location: region:161899-162474:-1
so has part: feature:161899-162474:-1:exon

WP_025243963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161899-162474:-1:exon

SOPEG_RS00950
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: diaA
locus tag: SOPEG_RS00950
old locus tag: SOPEG_0185
so part of: sequence
location: complement(162484..163074)
location: region:162484-163074:-1
so has part: feature:162484-163074:-1:exon
subclass of: SO_0000010

position:162484:-1
position: 162484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163074:-1
position: 163074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162484-163074:-1:exon

SOPEG_RS00950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: diaA
locus tag: SOPEG_RS00950
old locus tag: SOPEG_0185
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005228994.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DnaA initiator-associating protein DiaA
translation: MLERIKGCFTESIQTQIAAAEALPDAIAHAANVLAQALLGDKKILCCGNGTSAANAQHFAACMLNRFEAERPSLPAMTLNADTVVLTAIANDRQHDEIYAKQVRALGQVGDILLAISTRGNSRDIVKAVEAAVTRDMKIIALTGYDGGELAGLLGQQDVEIRIPSHRSARIQEMHMLTVNCLCDLIDNKLFPHLDD
SIO_010081: SOPEG_RS00950
subclass of: SO_0000673
so part of: SOPEG_RS00950
location: complement(162484..163074)
location: region:162484-163074:-1
so has part: feature:162484-163074:-1:exon

WP_025243964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:162484-163074:-1:exon

SOPEG_RS29015
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS29015
pseudo: true
so part of: sequence
location: complement(163115..>163213)
location: region:163115-163213:-1
so has part: feature:163115-163213:-1:exon
subclass of: SO_0000010

position:163115:-1
position: 163115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163213:-1
position: 163213
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163115-163213:-1:exon

SOPEG_RS29015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS29015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004948459.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: YraN family protein
SIO_010081: SOPEG_RS29015
subclass of: SO_0000673
so part of: SOPEG_RS29015
location: complement(163115..>163213)
location: region:163115-163213:-1
so has part: feature:163115-163213:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:163115-163213:-1:exon

SOPEG_RS00955
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00955
old locus tag: SOPEG_ps0186
pseudo: true
so part of: sequence
location: complement(163267..164768)
location: region:163267-164768:-1
so has part: feature:163267-164768:-1:exon
subclass of: SO_0000010

position:163267:-1
position: 163267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164768:-1
position: 164768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163267-164768:-1:exon

SOPEG_RS00955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00955
old locus tag: SOPEG_ps0186
inference: COORDINATES: similar to AA sequence:RefSeq:WP_041867331.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: penicillin-binding protein activator
SIO_010081: SOPEG_RS00955
subclass of: SO_0000673
so part of: SOPEG_RS00955
location: complement(163267..164768)
location: region:163267-164768:-1
so has part: feature:163267-164768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:163267-164768:-1:exon

SOPEG_RS00960
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rsmI
locus tag: SOPEG_RS00960
old locus tag: SOPEG_0187
so part of: sequence
location: 164831..165697
location: region:164831-165697:1
so has part: feature:164831-165697:1:exon
subclass of: SO_0000010

position:164831:1
position: 164831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165697:1
position: 165697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164831-165697:1:exon

SOPEG_RS00960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rsmI
locus tag: SOPEG_RS00960
old locus tag: SOPEG_0187
EC number: 2.1.1.198
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410090.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
translation: MNQHQQADISAATLYVVPTPIGNLEDITRRALSVLQGVDLIAAEDTRHTGLLLQHFAINARLFALHDHNEQQKADVLLAKLQDGQSIALVSDAGTPLINDPGYHLVRRCREAGIRVVPLPGACAAITALSAAGLPSDRFCYEGFLPAKRKARLDSLQGLAQEPRTLIFYESTHRLLESLEDMATAWGPLRYVVLARELTKTWESLHGGPVGELLAWVREDDMRRRGEMVLIVEGYRAPDDALPPEALRMLALLLAELPLKKAAALAAEIHGVKKNALYRYALDWQQKA
SIO_010081: SOPEG_RS00960
subclass of: SO_0000673
so part of: SOPEG_RS00960
location: 164831..165697
location: region:164831-165697:1
so has part: feature:164831-165697:1:exon

WP_038468022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164831-165697:1:exon

SOPEG_RS23655
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rnpB
locus tag: SOPEG_RS23655
so part of: sequence
location: 165773..166150
location: region:165773-166150:1
so has part: feature:165773-166150:1:exon
subclass of: SO_0000011

position:165773:1
position: 165773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166150:1
position: 166150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165773-166150:1:exon

SOPEG_RS23655
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2342
nc RNA class: RNase_P_RNA
gene: rnpB
locus tag: SOPEG_RS23655
product: RNase P RNA component class A
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00010
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: SOPEG_RS23655
subclass of: SO_0000673
so part of: SOPEG_RS23655
location: 165773..166150
location: region:165773-166150:1
so has part: feature:165773-166150:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:165773-166150:1:exon

SOPEG_RS00965
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00965
old locus tag: SOPEG_0188
so part of: sequence
location: complement(166213..166941)
location: region:166213-166941:-1
so has part: feature:166213-166941:-1:exon
subclass of: SO_0000010

position:166213:-1
position: 166213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166941:-1
position: 166941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166213-166941:-1:exon

SOPEG_RS00965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00965
old locus tag: SOPEG_0188
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019080027.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pirin family protein
translation: MITCRTAQQYGQADFGWLQARYTFSFGHYFDPAFLHYASLRALNQEVLAVGAAFQPRTYPPVDVLNIVLRGEAEYRDSNGHAVRVAAGDALMLAAQPGVSYSEHNIGAQPLTRMQLWLDACPTRENPAVQSLTLPVAPHVLLASPQGEQGSLRLRQQAWVHRVTLAAGESLTVPLNGRRAYVQSVYGQVEIGGMQSARGQLSCGDGAFVHDEQPLTLRATAPLQALLQALLIDLAGDDRPAP
SIO_010081: SOPEG_RS00965
subclass of: SO_0000673
so part of: SOPEG_RS00965
location: complement(166213..166941)
location: region:166213-166941:-1
so has part: feature:166213-166941:-1:exon

WP_025243965.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166213-166941:-1:exon

SOPEG_RS00970
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00970
old locus tag: SOPEG_0189
so part of: sequence
location: 167051..167941
location: region:167051-167941:1
so has part: feature:167051-167941:1:exon
subclass of: SO_0000010

position:167051:1
position: 167051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167941:1
position: 167941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167051-167941:1:exon

SOPEG_RS00970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00970
old locus tag: SOPEG_0189
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312014.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MAKDRALTLEALRVMDAIDRRGSFAAAAGELGRVPSALSYTMQKLEEELDVVLFDRSGHRTKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTLVTEALVPAEKLFPLIDKLARKANTQVSIISEVLAGAWERLEQGRADIVIAPDLHFRASLEINSRKLYRLLNVYVASPDHPIHQEPEPLSEVTRVKYRGIAIADTARERPVLTVQLLDKQQRLTVSTMADKHKALLAGLGVATMPYPLVEADIAAGRLRVVSPEYSAGSDIIMAWRRDSMGEAKSWFLREIPKLFS
SIO_010081: SOPEG_RS00970
subclass of: SO_0000673
so part of: SOPEG_RS00970
location: 167051..167941
location: region:167051-167941:1
so has part: feature:167051-167941:1:exon

WP_025243966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167051-167941:1:exon

SOPEG_RS00975
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00975
old locus tag: SOPEG_0190
pseudo: true
so part of: sequence
location: complement(168026..>169005)
location: region:168026-169005:-1
so has part: feature:168026-169005:-1:exon
subclass of: SO_0000010

position:168026:-1
position: 168026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169005:-1
position: 169005
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168026-169005:-1:exon

SOPEG_RS00975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00975
old locus tag: SOPEG_0190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000531189.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glutathione S-transferase family protein
SIO_010081: SOPEG_RS00975
subclass of: SO_0000673
so part of: SOPEG_RS00975
location: complement(168026..>169005)
location: region:168026-169005:-1
so has part: feature:168026-169005:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:168026-169005:-1:exon

SOPEG_RS00980
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00980
old locus tag: SOPEG_0191
so part of: sequence
location: complement(169223..169618)
location: region:169223-169618:-1
so has part: feature:169223-169618:-1:exon
subclass of: SO_0000010

position:169223:-1
position: 169223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169618:-1
position: 169618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169223-169618:-1:exon

SOPEG_RS00980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00980
old locus tag: SOPEG_0191
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DoxX family protein
translation: MKKLDDSALLVARVLMPILFIVAGYGKLGAGYAGTQQYMAAMGVPGFLLPLTILLEVGGGLAVLFGLLTRSVALITVVFTLLTAFIFHADFTQAGNQINFMKNLTIAGGYLLLAVSSPGAFSIDRLLAKKG
SIO_010081: SOPEG_RS00980
subclass of: SO_0000673
so part of: SOPEG_RS00980
location: complement(169223..169618)
location: region:169223-169618:-1
so has part: feature:169223-169618:-1:exon

WP_025243967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:169223-169618:-1:exon

SOPEG_RS00985
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00985
old locus tag: SOPEG_0192
so part of: sequence
location: 169851..170450
location: region:169851-170450:1
so has part: feature:169851-170450:1:exon
subclass of: SO_0000010

position:169851:1
position: 169851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170450:1
position: 170450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169851-170450:1:exon

SOPEG_RS00985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00985
old locus tag: SOPEG_0192
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410093.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MATNTETNPVRDSILAHGQRIMAGKGFSAVGLNEILAAARVPKGSFYHYFGSKEAFGEALLERYFADYLAYLDATLSAPDQNMAQRLMAYWQNWQDTQSFHDCQGKCLAVKLGAEVADLSEAMRLALARGTSGITRRLARAIEDGVAEGSLTIEGSPTEVAQSLYQLWLGASVMVKIARDTQPFVTAMATTRHILHLTL
SIO_010081: SOPEG_RS00985
subclass of: SO_0000673
so part of: SOPEG_RS00985
location: 169851..170450
location: region:169851-170450:1
so has part: feature:169851-170450:1:exon

WP_236851593.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:169851-170450:1:exon

SOPEG_RS00990
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS00990
old locus tag: SOPEG_0193
so part of: sequence
location: 170554..171237
location: region:170554-171237:1
so has part: feature:170554-171237:1:exon
subclass of: SO_0000010

position:170554:1
position: 170554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171237:1
position: 171237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170554-171237:1:exon

SOPEG_RS00990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS00990
old locus tag: SOPEG_0193
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014333871.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type 1 glutamine amidotransferase domain-containing protein
translation: MKVLMVLTSHDRLGDTGRKTGFWLEELAAPYYAFKDAGAEIVLASPNGGQPPLDPKSNEPAFQTGETRRFEADAGAMAQLSATVRLDNVAEADYDTVFYPGGHGPLWDLPEDRHSIALIAAFLAAGKPIALVCHAPGVLRHVKTPAGRPLVEGKHVTGFSNSEEAGVGLIEVVPFLVEDELKALGGLYAKVEDWASYVVSDGLLITGQNPASSAATSARLLEQLKAS
SIO_010081: SOPEG_RS00990
subclass of: SO_0000673
so part of: SOPEG_RS00990
location: 170554..171237
location: region:170554-171237:1
so has part: feature:170554-171237:1:exon

WP_025243969.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170554-171237:1:exon

SOPEG_RS23755
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS23755
old locus tag: SOPEG_ps0194
pseudo: true
so part of: sequence
location: 171373..172582
location: region:171373-172582:1
so has part: feature:171373-172582:1:exon
subclass of: SO_0000010

position:171373:1
position: 171373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172582:1
position: 172582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171373-172582:1:exon

SOPEG_RS23755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS23755
old locus tag: SOPEG_ps0194
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS256 family transposase
SIO_010081: SOPEG_RS23755
subclass of: SO_0000673
so part of: SOPEG_RS23755
location: 171373..172582
location: region:171373-172582:1
so has part: feature:171373-172582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:171373-172582:1:exon

SOPEG_RS25815
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: istA
locus tag: SOPEG_RS25815
old locus tag: SOPEG_ps0195
pseudo: true
so part of: sequence
location: complement(<172616..173365)
location: region:172616-173365:-1
so has part: feature:172616-173365:-1:exon
subclass of: SO_0000010

position:172616:-1
position: 172616
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:173365:-1
position: 173365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172616-173365:-1:exon

SOPEG_RS25815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: istA
locus tag: SOPEG_RS25815
old locus tag: SOPEG_ps0195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025245097.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21 family transposase
SIO_010081: SOPEG_RS25815
subclass of: SO_0000673
so part of: SOPEG_RS25815
location: complement(<172616..173365)
location: region:172616-173365:-1
so has part: feature:172616-173365:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:172616-173365:-1:exon

SOPEG_RS01005
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01005
old locus tag: SOPEG_0196
so part of: sequence
location: complement(173551..173838)
location: region:173551-173838:-1
so has part: feature:173551-173838:-1:exon
subclass of: SO_0000010

position:173551:-1
position: 173551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173838:-1
position: 173838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173551-173838:-1:exon

SOPEG_RS01005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01005
old locus tag: SOPEG_0196
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016534666.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YqjK-like family protein
translation: MSEPKPKHAKKLLLLHQIQQQRQALGVQSRRWQLVTAPWDRRWMRLLSFRRYLIAGTSLLALYNVCHPSRLMRWAKRGIGILGAVKMVRKALETR
SIO_010081: SOPEG_RS01005
subclass of: SO_0000673
so part of: SOPEG_RS01005
location: complement(173551..173838)
location: region:173551-173838:-1
so has part: feature:173551-173838:-1:exon

WP_025243973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173551-173838:-1:exon

SOPEG_RS01010
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01010
old locus tag: SOPEG_0197
pseudo: true
so part of: sequence
location: complement(<173928..174308)
location: region:173928-174308:-1
so has part: feature:173928-174308:-1:exon
subclass of: SO_0000010

position:173928:-1
position: 173928
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:174308:-1
position: 174308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173928-174308:-1:exon

SOPEG_RS01010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01010
old locus tag: SOPEG_0197
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015379160.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: phage holin family protein
SIO_010081: SOPEG_RS01010
subclass of: SO_0000673
so part of: SOPEG_RS01010
location: complement(<173928..174308)
location: region:173928-174308:-1
so has part: feature:173928-174308:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:173928-174308:-1:exon

SOPEG_RS01015
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01015
old locus tag: SOPEG_0198
so part of: sequence
location: complement(174314..174619)
location: region:174314-174619:-1
so has part: feature:174314-174619:-1:exon
subclass of: SO_0000010

position:174314:-1
position: 174314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174619:-1
position: 174619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174314-174619:-1:exon

SOPEG_RS01015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01015
old locus tag: SOPEG_0198
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004709853.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YqjD family protein
translation: MVKDATSEHLRAELKSLADTLEEVLRGSAQKPKAEFEKLRTKAERALKDTRSRLGDGSERLEEQTRVVASKADEYVHEYPWAGIGVGAVVGFILGALITRR
SIO_010081: SOPEG_RS01015
subclass of: SO_0000673
so part of: SOPEG_RS01015
location: complement(174314..174619)
location: region:174314-174619:-1
so has part: feature:174314-174619:-1:exon

WP_025243975.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174314-174619:-1:exon

SOPEG_RS01020
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: mzrA
locus tag: SOPEG_RS01020
old locus tag: SOPEG_0199
so part of: sequence
location: complement(175048..175407)
location: region:175048-175407:-1
so has part: feature:175048-175407:-1:exon
subclass of: SO_0000010

position:175048:-1
position: 175048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175407:-1
position: 175407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175048-175407:-1:exon

SOPEG_RS01020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: mzrA
locus tag: SOPEG_RS01020
old locus tag: SOPEG_0199
inference: COORDINATES: protein motif:HMM:NF007915.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EnvZ/OmpR regulon moderator MzrA
translation: MKRSRLGLLAVVVVVSLTLLLPTLCRDDSTLQITVARERGSLPDGFFLYQLLEDRGIHVKSITPAKDSMIIHLDTPEQAQAAQLVLQSHLPEGYAILKSRRYSAWQWLYRPAADEERLG
SIO_010081: SOPEG_RS01020
subclass of: SO_0000673
so part of: SOPEG_RS01020
location: complement(175048..175407)
location: region:175048-175407:-1
so has part: feature:175048-175407:-1:exon

WP_158382309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175048-175407:-1:exon

SOPEG_RS01025
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01025
old locus tag: SOPEG_0200
so part of: sequence
location: complement(175434..176105)
location: region:175434-176105:-1
so has part: feature:175434-176105:-1:exon
subclass of: SO_0000010

position:175434:-1
position: 175434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176105:-1
position: 176105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175434-176105:-1:exon

SOPEG_RS01025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01025
old locus tag: SOPEG_0200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410094.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DedA family protein
translation: MDIFKELLHAIWQQDFETLSDPSLVWTIYLLVFVILFLENGLLPAAFLPGDSLLILIGVLIAKGTLNFPLVLLLLTVAASLGSWISYIQGKWLENNRLVKSWLAHLPAHYHQRAYRMFHRHGLSALLIGRFVAFVRTLLPTIAGLSGLGSSRFHFFNWISAFLWVFILTLVGFILGKTPVFQRYEEELMLCLMLLPLALLTIGLVSSLVVIWRRKRLTDSDKE
SIO_010081: SOPEG_RS01025
subclass of: SO_0000673
so part of: SOPEG_RS01025
location: complement(175434..176105)
location: region:175434-176105:-1
so has part: feature:175434-176105:-1:exon

WP_025243977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175434-176105:-1:exon

SOPEG_RS01030
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01030
old locus tag: SOPEG_ps0201
so part of: sequence
location: complement(176137..176511)
location: region:176137-176511:-1
so has part: feature:176137-176511:-1:exon
subclass of: SO_0000010

position:176137:-1
position: 176137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176511:-1
position: 176511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176137-176511:-1:exon

SOPEG_RS01030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01030
old locus tag: SOPEG_ps0201
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQREAAARADKVSKRDFMSADVKLTAQGLFFPLKAPISWHFRLYLHCLNGVGFVTVWMIFLHFSRFASRRFARGFSLASDAGTGFAGADRAAFSLPFAVDRRVSVRSEANAAGSLPLFRFGGGQ
SIO_010081: SOPEG_RS01030
subclass of: SO_0000673
so part of: SOPEG_RS01030
location: complement(176137..176511)
location: region:176137-176511:-1
so has part: feature:176137-176511:-1:exon

WP_025243978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176137-176511:-1:exon

SOPEG_RS25820
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS25820
old locus tag: SOPEG_ps0202
pseudo: true
so part of: sequence
location: 177056..177669
location: region:177056-177669:1
so has part: feature:177056-177669:1:exon
subclass of: SO_0000010

position:177056:1
position: 177056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177669:1
position: 177669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177056-177669:1:exon

SOPEG_RS25820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS25820
old locus tag: SOPEG_ps0202
inference: COORDINATES: protein motif:HMM:NF017916.2
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF969 domain-containing protein
SIO_010081: SOPEG_RS25820
subclass of: SO_0000673
so part of: SOPEG_RS25820
location: 177056..177669
location: region:177056-177669:1
so has part: feature:177056-177669:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:177056-177669:1:exon

SOPEG_RS01040
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01040
old locus tag: SOPEG_0203
so part of: sequence
location: complement(177680..178888)
location: region:177680-178888:-1
so has part: feature:177680-178888:-1:exon
subclass of: SO_0000010

position:177680:-1
position: 177680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178888:-1
position: 178888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177680-178888:-1:exon

SOPEG_RS01040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01040
old locus tag: SOPEG_0203
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256-like element ISSoEn2 family transposase
translation: MDEKQLQALANELAKNLKTPEDLSHFDRLLKKISVEAALNAEMTQHLGYDKNQPKPGTNARNGYSTKTVTTGDGPLALRTPRDRDGSFEPQLVKKNQTRITGMDNQILSLYAKGMTTREIAAAFKELYDADVSPALVSKVTDAVMEQVVEWQNRPLDAVYPIVYLDCIVLKVRQDSRIINKSVFLALGINIEGQKELLGMWLAENEGAKFWLNVLTELKNRGLNDILIACVDGLKGFPDAINAVYPEARLQLCIVHMVRNSLRFVSWKDYKAVTRDLKAIYQAPTEEAGLQALEAFSSAWDIRYPQISRSWQANWANLATFFAYPTDIRKVIYTTNAIESLNSVIRHAIKKRKVFPTDDAVKKVVWLAIQAASQKWTMPLRDWRIAMSRFIIEFGDRLDDHF
SIO_010081: SOPEG_RS01040
subclass of: SO_0000673
so part of: SOPEG_RS01040
location: complement(177680..178888)
location: region:177680-178888:-1
so has part: feature:177680-178888:-1:exon

WP_025243979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177680-178888:-1:exon

SOPEG_RS01045
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: istB
locus tag: SOPEG_RS01045
old locus tag: SOPEG_0204
so part of: sequence
location: complement(179183..179932)
location: region:179183-179932:-1
so has part: feature:179183-179932:-1:exon
subclass of: SO_0000010

position:179183:-1
position: 179183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179932:-1
position: 179932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179183-179932:-1:exon

SOPEG_RS01045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: istB
locus tag: SOPEG_RS01045
old locus tag: SOPEG_0204
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025245096.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element ISSoEn3 family helper ATPase IstB
translation: MDTLLMALRELKLSAMVQALETQRELPGSYGELGFEERLSLMVEVENLHRKNNHICRMRRQSQMRLQAKPEDIRYIPSRGVTPEQMRDLLGGQYLKYQKSILITGPTGTGKTWLSCALGEQACRQQYSVRYWRVGRLLAHLHQCQVDGTYLKQLKQLEKIELLILNDVGLESISPMQATMLLEVMEDRYDKSSSILISQLPVKKWYGLIENPTTADALLDRLVHPSYRLELKGESLRKEQGVASTGKID
SIO_010081: SOPEG_RS01045
subclass of: SO_0000673
so part of: SOPEG_RS01045
location: complement(179183..179932)
location: region:179183-179932:-1
so has part: feature:179183-179932:-1:exon

WP_025243980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179183-179932:-1:exon

SOPEG_RS01050
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: istA
locus tag: SOPEG_RS01050
old locus tag: SOPEG_0205
so part of: sequence
location: complement(179944..181494)
location: region:179944-181494:-1
so has part: feature:179944-181494:-1:exon
subclass of: SO_0000010

position:179944:-1
position: 179944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181494:-1
position: 181494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179944-181494:-1:exon

SOPEG_RS01050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: istA
locus tag: SOPEG_RS01050
old locus tag: SOPEG_0205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025245097.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element ISSoEn3 family transposase
translation: MARKKKKARTEMCIYINVLRMKFEQRRSNRTIAAALGIGCTTVHDILGRFTVANLVWPLPAELSPVDLDRLLYPGKSGKVINTLPSWLDIDTELSRKGMTKQLLWMEYQSAVGGDALGYSQFCALFRDWKKKQRRSMRMEHKAGEKLFIDFCGPTVPIVNPATGSVRQVAIFVAAMGVSGYAYIEACEGQDMASWLNANSRCLHFMGGVPELMIPDNLRSAVSTPDRYEPVINQSYQALANHYETVVLPARPRKPKDKAKAESTVQLVERWVLARLRKRRFYSLAELNQVIRELNHELNLRPMRHYGGQSRLERFEQLDKPALGPLPPTQWEYSEYLVARVGPDYHIDYGKNWYSVPHPLVGERVDVIATQRLVQIHHKGVCVATHPRSDNAYRHTTQAAHMPANHQGQSQWTPERLCSWALSVGVCTLKVVESIQKSKAHPEQAYRSVLGLLNLQRRYETTRLEKACALALEKGCINRSFIANVLKHGRESEVTQDGAGVSMLVHENLRGPDSYH
SIO_010081: SOPEG_RS01050
subclass of: SO_0000673
so part of: SOPEG_RS01050
location: complement(179944..181494)
location: region:179944-181494:-1
so has part: feature:179944-181494:-1:exon

WP_081742890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179944-181494:-1:exon

SOPEG_RS01055
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01055
old locus tag: SOPEG_ps0206
so part of: sequence
location: complement(181588..181857)
location: region:181588-181857:-1
so has part: feature:181588-181857:-1:exon
subclass of: SO_0000010

position:181588:-1
position: 181588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181857:-1
position: 181857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181588-181857:-1:exon

SOPEG_RS01055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01055
old locus tag: SOPEG_ps0206
EC number: 3.1.-.-
inference: COORDINATES: protein motif:HMM:NF027788.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3'-5' exonuclease
translation: MNRPMNNVMLDIETLGKKAGCPILSVAAVMFEPATGLVGQIFYESIDYQAARQYGQPEEETLLWWCWFRSHPITDSDFTRSLILISSDH
SIO_010081: SOPEG_RS01055
subclass of: SO_0000673
so part of: SOPEG_RS01055
location: complement(181588..181857)
location: region:181588-181857:-1
so has part: feature:181588-181857:-1:exon

WP_081742891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181588-181857:-1:exon

SOPEG_RS01060
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01060
old locus tag: SOPEG_0207
so part of: sequence
location: complement(182020..182943)
location: region:182020-182943:-1
so has part: feature:182020-182943:-1:exon
subclass of: SO_0000010

position:182020:-1
position: 182020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182943:-1
position: 182943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182020-182943:-1:exon

SOPEG_RS01060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01060
old locus tag: SOPEG_0207
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDLTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDSIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKVFGEGAWKVRQHGAERRRVWRKLHLAVDSVTHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYYERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKTLLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS01060
subclass of: SO_0000673
so part of: SOPEG_RS01060
location: complement(182020..182943)
location: region:182020-182943:-1
so has part: feature:182020-182943:-1:exon

WP_025243983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182020-182943:-1:exon

SOPEG_RS01065
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01065
old locus tag: SOPEG_ps0208
pseudo: true
so part of: sequence
location: complement(<183019..183273)
location: region:183019-183273:-1
so has part: feature:183019-183273:-1:exon
subclass of: SO_0000010

position:183019:-1
position: 183019
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:183273:-1
position: 183273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183019-183273:-1:exon

SOPEG_RS01065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01065
old locus tag: SOPEG_ps0208
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: SOPEG_RS01065
subclass of: SO_0000673
so part of: SOPEG_RS01065
location: complement(<183019..183273)
location: region:183019-183273:-1
so has part: feature:183019-183273:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183019-183273:-1:exon

SOPEG_RS01070
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01070
old locus tag: SOPEG_0209
so part of: sequence
location: complement(183697..184620)
location: region:183697-184620:-1
so has part: feature:183697-184620:-1:exon
subclass of: SO_0000010

position:183697:-1
position: 183697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184620:-1
position: 184620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183697-184620:-1:exon

SOPEG_RS01070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01070
old locus tag: SOPEG_0209
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MAKQKFKITNWPPYNNALRQRGDLTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDSIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKVFGEGEWKVRQHRAERRRVWRKLHLAVDSVTHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKTLLGGHLSLHDYDAQVGETMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS01070
subclass of: SO_0000673
so part of: SOPEG_RS01070
location: complement(183697..184620)
location: region:183697-184620:-1
so has part: feature:183697-184620:-1:exon

WP_025243985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183697-184620:-1:exon

SOPEG_RS01075
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01075
old locus tag: SOPEG_0210
so part of: sequence
location: complement(184723..185646)
location: region:184723-185646:-1
so has part: feature:184723-185646:-1:exon
subclass of: SO_0000010

position:184723:-1
position: 184723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185646:-1
position: 185646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184723-185646:-1:exon

SOPEG_RS01075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01075
old locus tag: SOPEG_0210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
translation: MAKQKFKITNWPAGDNALRQRGDMTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDSIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKIFGEGEWKVRQHGAERRRVWRKLHLAVDSATHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKTLLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS01075
subclass of: SO_0000673
so part of: SOPEG_RS01075
location: complement(184723..185646)
location: region:184723-185646:-1
so has part: feature:184723-185646:-1:exon

WP_025243986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184723-185646:-1:exon

SOPEG_RS01080
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01080
old locus tag: SOPEG_0211
so part of: sequence
location: 185864..186787
location: region:185864-186787:1
so has part: feature:185864-186787:1:exon
subclass of: SO_0000010

position:185864:1
position: 185864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186787:1
position: 186787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185864-186787:1:exon

SOPEG_RS01080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01080
old locus tag: SOPEG_0211
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDLTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDSIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKIFGEGEWKVRQHGAERRRVWRKLHLAVDSATHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKILLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS01080
subclass of: SO_0000673
so part of: SOPEG_RS01080
location: 185864..186787
location: region:185864-186787:1
so has part: feature:185864-186787:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:185864-186787:1:exon

SOPEG_RS23765
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS23765
pseudo: true
so part of: sequence
location: 187280..>187496
location: region:187280-187496:1
so has part: feature:187280-187496:1:exon
subclass of: SO_0000010

position:187280:1
position: 187280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187496:1
position: 187496
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187280-187496:1:exon

SOPEG_RS23765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS23765
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000664222.1
GO function: GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO process: GO:0032775 - DNA methylation on adenine [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA adenine methylase
SIO_010081: SOPEG_RS23765
subclass of: SO_0000673
so part of: SOPEG_RS23765
location: 187280..>187496
location: region:187280-187496:1
so has part: feature:187280-187496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:187280-187496:1:exon

SOPEG_RS29020
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS29020
pseudo: true
so part of: sequence
location: <187858..188424
location: region:187858-188424:1
so has part: feature:187858-188424:1:exon
subclass of: SO_0000010

position:187858:1
position: 187858
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:188424:1
position: 188424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187858-188424:1:exon

SOPEG_RS29020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS29020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016192697.1
GO function: GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO process: GO:0032775 - DNA methylation on adenine [Evidence IEA]
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA adenine methylase
SIO_010081: SOPEG_RS29020
subclass of: SO_0000673
so part of: SOPEG_RS29020
location: <187858..188424
location: region:187858-188424:1
so has part: feature:187858-188424:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:187858-188424:1:exon

SOPEG_RS01090
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01090
old locus tag: SOPEG_ps0213
so part of: sequence
location: complement(188575..189264)
location: region:188575-189264:-1
so has part: feature:188575-189264:-1:exon
subclass of: SO_0000010

position:188575:-1
position: 188575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189264:-1
position: 189264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188575-189264:-1:exon

SOPEG_RS01090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01090
old locus tag: SOPEG_ps0213
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIITPFRECRTLTAAAGGMILVGETLDLSASRIDRLPNDMVIIGSLILRGCNITALPSGLRVLDYLDLNHMAIRRLPADLHVGGSLYIERSQLCQLPDNFSLDDHLVLENTPITSLPRNMCVGGCLNILGTGITYLPEDLYVGERLLLDAEKMTGNVAWRQLRNAELPPNPLFSPTSGSHQRDLTVYAVSLTGEIKISAGRFYGSPSAFIRNNPPQPFRQRGYWSAWRN
SIO_010081: SOPEG_RS01090
subclass of: SO_0000673
so part of: SOPEG_RS01090
location: complement(188575..189264)
location: region:188575-189264:-1
so has part: feature:188575-189264:-1:exon

WP_148296970.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188575-189264:-1:exon

SOPEG_RS26935
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS26935
so part of: sequence
location: 190232..190720
location: region:190232-190720:1
so has part: feature:190232-190720:1:exon
subclass of: SO_0000010

position:190232:1
position: 190232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190720:1
position: 190720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190232-190720:1:exon

SOPEG_RS26935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS26935
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTPPRWLAGHFIWLAQQLGPALNALPPSMPCYLVMQCDSGLPVEEEQQLLLQTGAPFNRHFTPLSASGLLALDDWLDDTARAPSALVVIAVQRAVPLEDALEEKGAVSGAEGIIESTVGLVMISEYCPSLPVLARIHHLDDVLGPAGMATPWLSLAVAGCSG
SIO_010081: SOPEG_RS26935
subclass of: SO_0000673
so part of: SOPEG_RS26935
location: 190232..190720
location: region:190232-190720:1
so has part: feature:190232-190720:1:exon

WP_148296971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:190232-190720:1:exon

SOPEG_RS01105
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01105
so part of: sequence
location: 191752..192783
location: region:191752-192783:1
so has part: feature:191752-192783:1:exon
subclass of: SO_0000010

position:191752:1
position: 191752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192783:1
position: 192783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191752-192783:1:exon

SOPEG_RS01105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01105
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVLPSRLIQRSPTNKTLLFQELEKANYWYGGQGHHVTLVSQQDTAIQLWLTQLLFGGTLEHWIVHTLFPQCDESELTLSKLRGKMYDQLLNLVECDASYTRDEANQLWQFLILAHCPLLIPLDQATDALRIDSLDWHDLHAGTLFLHYASPDHLIPKDKSFAQDIGNILFILSRATGQYGHFFKLSAALHAALTSSPTQGVMFKKRPYSLSHYFAARNAHLATHDRVAAFQEAVGQWRTRRQLAKDIIARHRPGLSPAEHAETLQRYLYPYAGLTARKPAHATDTPQPDLTDLPQLDEAYWQMTEKVSRSYVAQYRWLCAAGWEGLADDEQNYLRQATIHLI
SIO_010081: SOPEG_RS01105
subclass of: SO_0000673
so part of: SOPEG_RS01105
location: 191752..192783
location: region:191752-192783:1
so has part: feature:191752-192783:1:exon

WP_025243991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191752-192783:1:exon

SOPEG_RS26940
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS26940
so part of: sequence
location: 192793..193617
location: region:192793-193617:1
so has part: feature:192793-193617:1:exon
subclass of: SO_0000010

position:192793:1
position: 192793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193617:1
position: 193617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192793-193617:1:exon

SOPEG_RS26940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS26940
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQPSQRRPEWSQSEHVYRPKENIDVFKAVWGDEARFYAAINASDGCKVRRIDKIDNHLDELMQASTVAEAGIRVSFLMQVKSEQQSLATFIDTIAHRHEEMFTGRLSEYGKLTTSNEMLHTTLVAKMPFTGCYEYRPDAEGLDCHLNTHLLMTVMGEMAASAKDDAQRRVIDAVITGIRSNLLLTKRGGMDCVSPCPTRRITGSRPPSNLPARRRPVWITGSIRTWKAFTRCPKPRWPMSLRWGTPLAKRCTIMAGCWRRWTTVISCARCRTRR
SIO_010081: SOPEG_RS26940
subclass of: SO_0000673
so part of: SOPEG_RS26940
location: 192793..193617
location: region:192793-193617:1
so has part: feature:192793-193617:1:exon

WP_148296972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192793-193617:1:exon

SOPEG_RS01110
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01110
so part of: sequence
location: 193572..194078
location: region:193572-194078:1
so has part: feature:193572-194078:1:exon
subclass of: SO_0000010

position:193572:1
position: 193572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194078:1
position: 194078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193572-194078:1:exon

SOPEG_RS01110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01110
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDDRDFLRPLPDAPVADLIAVAGQYKLTLPFQRISQHGIYVKVMPEMGVLYGPQFMLQQRNKNRIGVIEKTSDVLDVYFMFPPSSSGASVMRAAHITLDLAGIATGDLPALQRFISLRPAMGLKYINVRKISVLLDRFLGKGQYYMLSHYDLQQNQKATSTFPTSFLH
SIO_010081: SOPEG_RS01110
subclass of: SO_0000673
so part of: SOPEG_RS01110
location: 193572..194078
location: region:193572-194078:1
so has part: feature:193572-194078:1:exon

WP_148296973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193572-194078:1:exon

SOPEG_RS01115
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01115
so part of: sequence
location: 194091..195065
location: region:194091-195065:1
so has part: feature:194091-195065:1:exon
subclass of: SO_0000010

position:194091:1
position: 194091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195065:1
position: 195065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194091-195065:1:exon

SOPEG_RS01115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01115
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKKTDEAREAVLALKQLFAEAGFLPRDRDKSLAQSPPLPRTSPIYHYLLFALGVKPADDKIIQYAARWLCYYTERIDEEFAARPFAENVLFVAHKARRIQPDGKPSLMGFTFCNVKYRRLLIMADSFDDANQTLPRMHLFHEASLRLASVNYLHAPIATDNGQTNERVEVYEDREDIREADLMYYNAESQFIDRYRRALLKSVAAPGETDPAARQRRNRAVTAMSRAAFIKRLWQDNLLRANLLMDDADTVATYIYDLGRGMRYIPEGQTRLPGDRLSQLPRKIYALIIASGRRRKPASQTDYCVPGHCSGSISRRISTGKKG
SIO_010081: SOPEG_RS01115
subclass of: SO_0000673
so part of: SOPEG_RS01115
location: 194091..195065
location: region:194091-195065:1
so has part: feature:194091-195065:1:exon

WP_025243993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194091-195065:1:exon

SOPEG_RS01120
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01120
old locus tag: SOPEG_0216
so part of: sequence
location: complement(195149..195583)
location: region:195149-195583:-1
so has part: feature:195149-195583:-1:exon
subclass of: SO_0000010

position:195149:-1
position: 195149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195583:-1
position: 195583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195149-195583:-1:exon

SOPEG_RS01120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01120
old locus tag: SOPEG_0216
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410056.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YhbP family protein
translation: MDEQLAAICRFITKQHVLTLCAGNLDDLWCANCFYVFHEPAMALWLLTSPQTRHGELMRQNARVAGTIAPQPKTVALIKGVQYRGIITCLEGEEEQQARRRYYHRFPLAKAMPSPIWQLDLLEVKMTDNTLGFGKKLRWRREAL
SIO_010081: SOPEG_RS01120
subclass of: SO_0000673
so part of: SOPEG_RS01120
location: complement(195149..195583)
location: region:195149-195583:-1
so has part: feature:195149-195583:-1:exon

WP_025243994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195149-195583:-1:exon

SOPEG_RS01125
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01125
old locus tag: SOPEG_ps0217
pseudo: true
so part of: sequence
location: 195928..196872
location: region:195928-196872:1
so has part: feature:195928-196872:1:exon
subclass of: SO_0000010

position:195928:1
position: 195928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196872:1
position: 196872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195928-196872:1:exon

SOPEG_RS01125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01125
old locus tag: SOPEG_ps0217
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009114687.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF1615 domain-containing protein
SIO_010081: SOPEG_RS01125
subclass of: SO_0000673
so part of: SOPEG_RS01125
location: 195928..196872
location: region:195928-196872:1
so has part: feature:195928-196872:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:195928-196872:1:exon

SOPEG_RS01130
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01130
old locus tag: SOPEG_0218
so part of: sequence
location: 197266..197757
location: region:197266-197757:1
so has part: feature:197266-197757:1:exon
subclass of: SO_0000010

position:197266:1
position: 197266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197757:1
position: 197757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197266-197757:1:exon

SOPEG_RS01130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01130
old locus tag: SOPEG_0218
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003850961.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YsnF/AvaK domain-containing protein
translation: MRNHSADDSSLPSTAEGETAETVQETLPLAQERVDVAKQRVVQGCVTVTRRTTEREQAIEEWLQQENVEIHRVIKGTPLEAHPAIREEDGVMIIPVVDEHIEVVRTLVLREEIHIRKVTTAVPYQESVTLRSQDITVEKQRDDCSDAKYFGLICKQFWTPLNY
SIO_010081: SOPEG_RS01130
subclass of: SO_0000673
so part of: SOPEG_RS01130
location: 197266..197757
location: region:197266-197757:1
so has part: feature:197266-197757:1:exon

WP_025243995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197266-197757:1:exon

SOPEG_RS29025
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS29025
pseudo: true
so part of: sequence
location: complement(197803..>198368)
location: region:197803-198368:-1
so has part: feature:197803-198368:-1:exon
subclass of: SO_0000010

position:197803:-1
position: 197803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198368:-1
position: 198368
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197803-198368:-1:exon

SOPEG_RS29025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS29025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016192697.1
GO function: GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO process: GO:0032775 - DNA methylation on adenine [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA adenine methylase
SIO_010081: SOPEG_RS29025
subclass of: SO_0000673
so part of: SOPEG_RS29025
location: complement(197803..>198368)
location: region:197803-198368:-1
so has part: feature:197803-198368:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:197803-198368:-1:exon

SOPEG_RS23770
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS23770
pseudo: true
so part of: sequence
location: complement(<198730..198945)
location: region:198730-198945:-1
so has part: feature:198730-198945:-1:exon
subclass of: SO_0000010

position:198730:-1
position: 198730
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:198945:-1
position: 198945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198730-198945:-1:exon

SOPEG_RS23770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS23770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000664222.1
GO function: GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO process: GO:0032775 - DNA methylation on adenine [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA adenine methylase
SIO_010081: SOPEG_RS23770
subclass of: SO_0000673
so part of: SOPEG_RS23770
location: complement(<198730..198945)
location: region:198730-198945:-1
so has part: feature:198730-198945:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:198730-198945:-1:exon

SOPEG_RS01140
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01140
old locus tag: SOPEG_ps0220
so part of: sequence
location: 199274..199531
location: region:199274-199531:1
so has part: feature:199274-199531:1:exon
subclass of: SO_0000010

position:199274:1
position: 199274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199531:1
position: 199531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199274-199531:1:exon

SOPEG_RS01140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01140
old locus tag: SOPEG_ps0220
EC number: 2.3.-.-
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: acyltransferase
translation: MKYLYDIDGLRAIAIIFVLAFYGGLTVFPSGFIGVDMFFVISGFLITSVIINSMKNNDFSFFGFYRRRLWRLQPALIAIVLGFVE
SIO_010081: SOPEG_RS01140
subclass of: SO_0000673
so part of: SOPEG_RS01140
location: 199274..199531
location: region:199274-199531:1
so has part: feature:199274-199531:1:exon

WP_025243998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199274-199531:1:exon

SOPEG_RS01145
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01145
old locus tag: SOPEG_0221
so part of: sequence
location: 199592..200515
location: region:199592-200515:1
so has part: feature:199592-200515:1:exon
subclass of: SO_0000010

position:199592:1
position: 199592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200515:1
position: 200515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199592-200515:1:exon

SOPEG_RS01145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01145
old locus tag: SOPEG_0221
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDLTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDAIFKLMGPSLPCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKIFGEGEWKVRQHGAERRRVWRKLHLAVDSATHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKTLLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS01145
subclass of: SO_0000673
so part of: SOPEG_RS01145
location: 199592..200515
location: region:199592-200515:1
so has part: feature:199592-200515:1:exon

WP_025243999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199592-200515:1:exon

SOPEG_RS01150
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01150
old locus tag: SOPEG_ps0222
so part of: sequence
location: 200634..201311
location: region:200634-201311:1
so has part: feature:200634-201311:1:exon
subclass of: SO_0000010

position:200634:1
position: 200634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201311:1
position: 201311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200634-201311:1:exon

SOPEG_RS01150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01150
old locus tag: SOPEG_ps0222
inference: COORDINATES: protein motif:HMM:NF017931.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF979 family protein
translation: MLIPLVTLLGTFVFKNLTWNGALLIPAGSSTLAALGLGIIVVFFVALMMLRETLASAMNEGRRLLDAIGWASVLPQMLAALGGGGGIFALVGVGKLVAGLITDVIPLGLPIVAVAAYCIGMTLFTIIMGNTFAAFPIMTAGIGLPIIVGHMGGNPAIMSAIGMLAGFCGTLMTPMVTPMAANFNIVPAALLELSDQHEVIKVQFHTAILLLIINILLMSILVFRF
SIO_010081: SOPEG_RS01150
subclass of: SO_0000673
so part of: SOPEG_RS01150
location: 200634..201311
location: region:200634-201311:1
so has part: feature:200634-201311:1:exon

WP_051419378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200634-201311:1:exon

SOPEG_RS01155
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01155
old locus tag: SOPEG_ps0223
pseudo: true
so part of: sequence
location: 201444..202329
location: region:201444-202329:1
so has part: feature:201444-202329:1:exon
subclass of: SO_0000010

position:201444:1
position: 201444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202329:1
position: 202329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201444-202329:1:exon

SOPEG_RS01155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01155
old locus tag: SOPEG_ps0223
inference: COORDINATES: protein motif:HMM:NF022646.2
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF2891 domain-containing protein
SIO_010081: SOPEG_RS01155
subclass of: SO_0000673
so part of: SOPEG_RS01155
location: 201444..202329
location: region:201444-202329:1
so has part: feature:201444-202329:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:201444-202329:1:exon

SOPEG_RS01160
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: exuR
locus tag: SOPEG_RS01160
old locus tag: SOPEG_ps0224
pseudo: true
so part of: sequence
location: complement(202346..203124)
location: region:202346-203124:-1
so has part: feature:202346-203124:-1:exon
subclass of: SO_0000010

position:202346:-1
position: 202346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203124:-1
position: 203124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202346-203124:-1:exon

SOPEG_RS01160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: exuR
locus tag: SOPEG_RS01160
old locus tag: SOPEG_ps0224
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016943152.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transcriptional regulator ExuR
SIO_010081: SOPEG_RS01160
subclass of: SO_0000673
so part of: SOPEG_RS01160
location: complement(202346..203124)
location: region:202346-203124:-1
so has part: feature:202346-203124:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:202346-203124:-1:exon

SOPEG_RS01165
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01165
old locus tag: SOPEG_0225
so part of: sequence
location: complement(203385..204674)
location: region:203385-204674:-1
so has part: feature:203385-204674:-1:exon
subclass of: SO_0000010

position:203385:-1
position: 203385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204674:-1
position: 204674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203385-204674:-1:exon

SOPEG_RS01165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01165
old locus tag: SOPEG_0225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004846755.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MRKIKGLRWYMIALVTVGTVLGYLTRNAIAVAAPTLQDQLHITTQQYSYIIAAYSACYTIMQPVAGYVLDMLGTKVGYAVFAILWAVFCMATALASSWGDRAIARGAVGMAEAAMIPAGLKASSEWFPAIERSIAVGYFNVGSSIGAMVVPPLVVWAIMIHSWEMAFIITGMLSLIWALCWLVFYNHPKNQKKLTEEERDYILSGQEAQHQVNNGKKMSAWEILHNRQFWGIALPRFLAEPAWGTFNAWIPLFMFKVYGFNLKKIAMFAWMPMLFADLGCIVGGYMPPFFQRVFGVNLIVSRKLVVTLGAFLMIGPGMIGLFTSPYVAIGLLCIGGFAHQSLSGALITLSSDVFGRNEVATANGLTDMAAWLASTLFALVVGALADTIGFSPLFAVLALFDLLGALCIWTILKNRPADEVESQRTPATV
SIO_010081: SOPEG_RS01165
subclass of: SO_0000673
so part of: SOPEG_RS01165
location: complement(203385..204674)
location: region:203385-204674:-1
so has part: feature:203385-204674:-1:exon

WP_025244003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203385-204674:-1:exon

SOPEG_RS01170
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01170
old locus tag: SOPEG_ps0226
pseudo: true
so part of: sequence
location: 205192..>205638
location: region:205192-205638:1
so has part: feature:205192-205638:1:exon
subclass of: SO_0000010

position:205192:1
position: 205192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205638:1
position: 205638
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205192-205638:1:exon

SOPEG_RS01170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01170
old locus tag: SOPEG_ps0226
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312001.1
GO function: GO:0008880 - glucuronate isomerase activity [Evidence IEA]
GO process: GO:0006064 - glucuronate catabolic process [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glucuronate isomerase
SIO_010081: SOPEG_RS01170
subclass of: SO_0000673
so part of: SOPEG_RS01170
location: 205192..>205638
location: region:205192-205638:1
so has part: feature:205192-205638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205192-205638:1:exon

SOPEG_RS22370
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS22370
old locus tag: SOPEG_0227
so part of: sequence
location: complement(205884..206435)
location: region:205884-206435:-1
so has part: feature:205884-206435:-1:exon
subclass of: SO_0000010

position:205884:-1
position: 205884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206435:-1
position: 206435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205884-206435:-1:exon

SOPEG_RS22370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS22370
old locus tag: SOPEG_0227
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MGTKENKFAFGWEGKESFRERLEMLIGGRSIRSAAKAWGLPASTINNYLHKGTEPALKVVLSLAEAENVSLEWLALGLNKERRAKSSPKTQEHDNLKHTWLMIYESLDRQDIESLIRLIHKERAKGILLSSSRIDSVDNALLLLSQEEKERLMQLYDQIKKGASEEGEVASEDSLASERKRVV
SIO_010081: SOPEG_RS22370
subclass of: SO_0000673
so part of: SOPEG_RS22370
location: complement(205884..206435)
location: region:205884-206435:-1
so has part: feature:205884-206435:-1:exon

WP_025244005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205884-206435:-1:exon

SOPEG_RS01180
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01180
old locus tag: SOPEG_0228
so part of: sequence
location: 206604..206840
location: region:206604-206840:1
so has part: feature:206604-206840:1:exon
subclass of: SO_0000010

position:206604:1
position: 206604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206840:1
position: 206840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206604-206840:1:exon

SOPEG_RS01180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01180
old locus tag: SOPEG_0228
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000989761.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MIDRNEVNHCDWHRIDIVASLHKKGITMQDLSRGSGLASSTLKNALYRPYPKGERIIANALNVDLASIWPSRYMVKVS
SIO_010081: SOPEG_RS01180
subclass of: SO_0000673
so part of: SOPEG_RS01180
location: 206604..206840
location: region:206604-206840:1
so has part: feature:206604-206840:1:exon

WP_025244006.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206604-206840:1:exon

SOPEG_RS01185
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01185
old locus tag: SOPEG_ps0229
pseudo: true
so part of: sequence
location: 206843..208885
location: region:206843-208885:1
so has part: feature:206843-208885:1:exon
subclass of: SO_0000010

position:206843:1
position: 206843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208885:1
position: 208885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206843-208885:1:exon

SOPEG_RS01185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01185
old locus tag: SOPEG_ps0229
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003030404.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Mu transposase C-terminal domain-containing protein
SIO_010081: SOPEG_RS01185
subclass of: SO_0000673
so part of: SOPEG_RS01185
location: 206843..208885
location: region:206843-208885:1
so has part: feature:206843-208885:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:206843-208885:1:exon

SOPEG_RS01190
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01190
old locus tag: SOPEG_0230
so part of: sequence
location: 208897..209826
location: region:208897-209826:1
so has part: feature:208897-209826:1:exon
subclass of: SO_0000010

position:208897:1
position: 208897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209826:1
position: 209826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208897-209826:1:exon

SOPEG_RS01190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01190
old locus tag: SOPEG_0230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016192740.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MTTRERIFQLMERSGYTQRKVADKTGLSGATISQYLKGVYNGNIDNVEGTLRDFLDRETERAHRRDIKVHFVPTHLARVALDLIGATHDFGDIGVIYGPAGMGKSMVLKEYVRANSANKGVILIEADPGYTTKVLLQALCARLGLRKTGNIHELVEECVQGLRDKNWLVLVDEAELLPYRALEVLRRIHDRSGVAIVLAGMPRLLLNLKGSRGEYAQLYSRVGMALDLESRKKDSEAEDFSAILGSLLSNGEATGEPLAPEIAAAFRKHSRGNYRRLFKLARGVARTSAIGNQGMSVTLIDRYAEMLIH
SIO_010081: SOPEG_RS01190
subclass of: SO_0000673
so part of: SOPEG_RS01190
location: 208897..209826
location: region:208897-209826:1
so has part: feature:208897-209826:1:exon

WP_025244007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208897-209826:1:exon

SOPEG_RS01195
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01195
old locus tag: SOPEG_ps0231
so part of: sequence
location: 209838..210128
location: region:209838-210128:1
so has part: feature:209838-210128:1:exon
subclass of: SO_0000010

position:209838:1
position: 209838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210128:1
position: 210128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209838-210128:1:exon

SOPEG_RS01195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01195
old locus tag: SOPEG_ps0231
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVHHKAASTNTHLIAAMTQAGAVIHYLTIRGVSVKSVILHNCKSVIRIEHHPLCEQLLKQGQADYITVGKNAQGGFKQGAFMKGGCKVIWSTSLH
SIO_010081: SOPEG_RS01195
subclass of: SO_0000673
so part of: SOPEG_RS01195
location: 209838..210128
location: region:209838-210128:1
so has part: feature:209838-210128:1:exon

WP_025244008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209838-210128:1:exon

SOPEG_RS26950
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS26950
so part of: sequence
location: 210136..210327
location: region:210136-210327:1
so has part: feature:210136-210327:1:exon
subclass of: SO_0000010

position:210136:1
position: 210136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210327:1
position: 210327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210136-210327:1:exon

SOPEG_RS26950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS26950
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPIKITVTLLDDEKGTHANIRAKQKKVTPHEDKCARLLLKLIEMYFSEIGENENRIKGVPHVH
SIO_010081: SOPEG_RS26950
subclass of: SO_0000673
so part of: SOPEG_RS26950
location: 210136..210327
location: region:210136-210327:1
so has part: feature:210136-210327:1:exon

WP_148296976.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210136-210327:1:exon

SOPEG_RS01200
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01200
old locus tag: SOPEG_ps0232
so part of: sequence
location: 210317..210559
location: region:210317-210559:1
so has part: feature:210317-210559:1:exon
subclass of: SO_0000010

position:210317:1
position: 210317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210559:1
position: 210559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210317-210559:1:exon

SOPEG_RS01200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01200
old locus tag: SOPEG_ps0232
inference: COORDINATES: protein motif:HMM:NF022807.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3164 family protein
translation: MSTNSHDNTVPAGYWQDAKRVLIPDAMVKPIDKERDALVKDIVGRARPLYEALRDFKHRAFVDIQALIDLSIEQYGGFVE
SIO_010081: SOPEG_RS01200
subclass of: SO_0000673
so part of: SOPEG_RS01200
location: 210317..210559
location: region:210317-210559:1
so has part: feature:210317-210559:1:exon

WP_025244009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210317-210559:1:exon

SOPEG_RS01205
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01205
old locus tag: SOPEG_0233
so part of: sequence
location: 210620..211543
location: region:210620-211543:1
so has part: feature:210620-211543:1:exon
subclass of: SO_0000010

position:210620:1
position: 210620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211543:1
position: 211543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210620-211543:1:exon

SOPEG_RS01205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01205
old locus tag: SOPEG_0233
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDMTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDAIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKIFGEGEWKVRQHGAERRRVWRKLHLAVDSATHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYYERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKTLLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS01205
subclass of: SO_0000673
so part of: SOPEG_RS01205
location: 210620..211543
location: region:210620-211543:1
so has part: feature:210620-211543:1:exon

WP_025244010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210620-211543:1:exon

SOPEG_RS30335
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS30335
so part of: sequence
location: complement(211585..211707)
location: region:211585-211707:-1
so has part: feature:211585-211707:-1:exon
subclass of: SO_0000010

position:211585:-1
position: 211585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211707:-1
position: 211707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211585-211707:-1:exon

SOPEG_RS30335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS30335
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKYLYDIDGLRAIAIIFVLAFYGGLTVFPSGFIGVDRFVE
SIO_010081: SOPEG_RS30335
subclass of: SO_0000673
so part of: SOPEG_RS30335
location: complement(211585..211707)
location: region:211585-211707:-1
so has part: feature:211585-211707:-1:exon

WP_257720367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211585-211707:-1:exon

SOPEG_RS23775
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS23775
pseudo: true
so part of: sequence
location: 212037..>212249
location: region:212037-212249:1
so has part: feature:212037-212249:1:exon
subclass of: SO_0000010

position:212037:1
position: 212037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212249:1
position: 212249
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212037-212249:1:exon

SOPEG_RS23775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS23775
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000664222.1
GO function: GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO process: GO:0032775 - DNA methylation on adenine [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA adenine methylase
SIO_010081: SOPEG_RS23775
subclass of: SO_0000673
so part of: SOPEG_RS23775
location: 212037..>212249
location: region:212037-212249:1
so has part: feature:212037-212249:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:212037-212249:1:exon

SOPEG_RS29030
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS29030
pseudo: true
so part of: sequence
location: <212614..213180
location: region:212614-213180:1
so has part: feature:212614-213180:1:exon
subclass of: SO_0000010

position:212614:1
position: 212614
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:213180:1
position: 213180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212614-213180:1:exon

SOPEG_RS29030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS29030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016192697.1
GO function: GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO process: GO:0032775 - DNA methylation on adenine [Evidence IEA]
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA adenine methylase
SIO_010081: SOPEG_RS29030
subclass of: SO_0000673
so part of: SOPEG_RS29030
location: <212614..213180
location: region:212614-213180:1
so has part: feature:212614-213180:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:212614-213180:1:exon

SOPEG_RS01215
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: istB
locus tag: SOPEG_RS01215
old locus tag: SOPEG_ps0235
pseudo: true
so part of: sequence
location: <213276..213596
location: region:213276-213596:1
so has part: feature:213276-213596:1:exon
subclass of: SO_0000010

position:213276:1
position: 213276
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:213596:1
position: 213596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213276-213596:1:exon

SOPEG_RS01215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: istB
locus tag: SOPEG_RS01215
old locus tag: SOPEG_ps0235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025245096.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21-like element ISSoEn3 family helper ATPase IstB
SIO_010081: SOPEG_RS01215
subclass of: SO_0000673
so part of: SOPEG_RS01215
location: <213276..213596
location: region:213276-213596:1
so has part: feature:213276-213596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:213276-213596:1:exon

SOPEG_RS01220
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: tuf
locus tag: SOPEG_RS01220
old locus tag: SOPEG_0236
so part of: sequence
location: complement(213947..215131)
location: region:213947-215131:-1
so has part: feature:213947-215131:-1:exon
subclass of: SO_0000010

position:213947:-1
position: 213947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215131:-1
position: 215131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213947-215131:-1:exon

SOPEG_RS01220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: tuf
locus tag: SOPEG_RS01220
old locus tag: SOPEG_0236
inference: COORDINATES: similar to AA sequence:RefSeq:NP_462349.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor Tu
translation: MSKEKFQRTKPHVNVGTIGHVDHGKTTLTAAITTVLAKAYGGSARAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFMNKCDMVDDEELLELVEMEVRELLSQYDFPGDDTPVIYGSALKALEGDEAWTQKIIELAEALDSYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIVKVGEEVEIVGIKDTTKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDDVERGQVLAKPGSIKPHTQFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMVVNLIAPIAMDDGLRFAIREGGRTVGAGVVAKVIG
SIO_010081: SOPEG_RS01220
subclass of: SO_0000673
so part of: SOPEG_RS01220
location: complement(213947..215131)
location: region:213947-215131:-1
so has part: feature:213947-215131:-1:exon

WP_025244013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213947-215131:-1:exon

SOPEG_RS01225
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: fusA
locus tag: SOPEG_RS01225
old locus tag: SOPEG_0237
so part of: sequence
location: complement(215203..217308)
location: region:215203-217308:-1
so has part: feature:215203-217308:-1:exon
subclass of: SO_0000010

position:215203:-1
position: 215203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217308:-1
position: 217308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215203-217308:-1:exon

SOPEG_RS01225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: fusA
locus tag: SOPEG_RS01225
old locus tag: SOPEG_0237
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412092.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor G
translation: MARITPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHNGAATMDWMAQEQERGITITSAATTCFWAGMAKQFDSHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANYLRVVEQLKTRLAANPVPIQLAIGAEEKFTGVVDLVKMKAINWSEADQGVTFTYEDIPADLTELADKWHQHLVESAAEVSEELMDKYLGGEDLTEEEIKTGLRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIEYLPAPTDVAAIDGVLDDGETHAERHSSDDEPFSALAFKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKDKRERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDPSSPIILERMEFPEPVISVAVEPKTKADQEKMGLALGRLAQEDPSFRVWTDEESGQTIIAGMGELHLEILVDRMRREFNVEANVGKPQVAYRETIRSTVEQEGKFVRQSGGRGQFGHVWLRIEPMEPGGKGYEFLNEIVGGVVPKEYVPAVDKGVQEQLKSGVLAGYPIVDVRVAAFDGSYHEVDSSEMAFKIAGSMAFKEGFMKAKPVLLEPIMKVEVETPEDYMGDVIGDLNRRRGMIDGMEDTTTGKTVRAQVPLSEMFGYATDLRSQTQGRASYSMEFLKYNEAPNNVAQAIIETRRAK
SIO_010081: SOPEG_RS01225
subclass of: SO_0000673
so part of: SOPEG_RS01225
location: complement(215203..217308)
location: region:215203-217308:-1
so has part: feature:215203-217308:-1:exon

WP_025244014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215203-217308:-1:exon

SOPEG_RS01230
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rpsG
locus tag: SOPEG_RS01230
old locus tag: SOPEG_0238
so part of: sequence
location: complement(217403..217873)
location: region:217403-217873:-1
so has part: feature:217403-217873:-1:exon
subclass of: SO_0000010

position:217403:-1
position: 217403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217873:-1
position: 217873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217403-217873:-1:exon

SOPEG_RS01230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rpsG
locus tag: SOPEG_RS01230
old locus tag: SOPEG_0238
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S7
translation: MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAEAIVYTALETLAQRSGKGHLEAFEVALDNVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRLANELSDAAENKGTAVKKREDVHRMADANKAFAHYRW
SIO_010081: SOPEG_RS01230
subclass of: SO_0000673
so part of: SOPEG_RS01230
location: complement(217403..217873)
location: region:217403-217873:-1
so has part: feature:217403-217873:-1:exon

WP_011412093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217403-217873:-1:exon

SOPEG_RS01235
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rpsL
locus tag: SOPEG_RS01235
old locus tag: SOPEG_0239
so part of: sequence
location: complement(217968..218342)
location: region:217968-218342:-1
so has part: feature:217968-218342:-1:exon
subclass of: SO_0000010

position:217968:-1
position: 217968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218342:-1
position: 218342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217968-218342:-1:exon

SOPEG_RS01235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rpsL
locus tag: SOPEG_RS01235
old locus tag: SOPEG_0239
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003852912.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S12
translation: MATINQLVRKPRSMKVAKNNVPALDACPQKRGVCTRVYTTTPKKPNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCSGVKDRKQGRSKYGVKKPKA
SIO_010081: SOPEG_RS01235
subclass of: SO_0000673
so part of: SOPEG_RS01235
location: complement(217968..218342)
location: region:217968-218342:-1
so has part: feature:217968-218342:-1:exon

WP_025244015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217968-218342:-1:exon

SOPEG_RS01240
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: tusB
locus tag: SOPEG_RS01240
old locus tag: SOPEG_0240
so part of: sequence
location: complement(218476..218763)
location: region:218476-218763:-1
so has part: feature:218476-218763:-1:exon
subclass of: SO_0000010

position:218476:-1
position: 218476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218763:-1
position: 218763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218476-218763:-1:exon

SOPEG_RS01240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: tusB
locus tag: SOPEG_RS01240
old locus tag: SOPEG_0240
EC number: 2.8.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016930327.1
GO process: GO:0002143 - tRNA wobble position uridine thiolation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase complex subunit TusB
translation: MLYTLSRSPYACDLAALLRTARPGDDLLLLSDGVIAGLRGSPAARALSASPLALHALENDIAARGLSVHFSPNIAIISYNDFVRLTEKQPQQMAW
SIO_010081: SOPEG_RS01240
subclass of: SO_0000673
so part of: SOPEG_RS01240
location: complement(218476..218763)
location: region:218476-218763:-1
so has part: feature:218476-218763:-1:exon

WP_025244016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:218476-218763:-1:exon

SOPEG_RS01245
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: tusC
locus tag: SOPEG_RS01245
old locus tag: SOPEG_0241
so part of: sequence
location: complement(218779..219138)
location: region:218779-219138:-1
so has part: feature:218779-219138:-1:exon
subclass of: SO_0000010

position:218779:-1
position: 218779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219138:-1
position: 219138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218779-219138:-1:exon

SOPEG_RS01245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: tusC
locus tag: SOPEG_RS01245
old locus tag: SOPEG_0241
EC number: 2.8.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005174640.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase complex subunit TusC
translation: MNRIAFVFTHGPHGDAAGREGLDALLATSALAEDIGVFFIADGVLLLLPQQQPAQILARDFVATFGVLSLYDVDRLYLCADSAAERGLDAGAGWVLDAEWLPAADWRQRLAAYDTVLTF
SIO_010081: SOPEG_RS01245
subclass of: SO_0000673
so part of: SOPEG_RS01245
location: complement(218779..219138)
location: region:218779-219138:-1
so has part: feature:218779-219138:-1:exon

WP_025244017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:218779-219138:-1:exon

SOPEG_RS01250
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: tusD
locus tag: SOPEG_RS01250
old locus tag: SOPEG_0242
so part of: sequence
location: complement(219146..219538)
location: region:219146-219538:-1
so has part: feature:219146-219538:-1:exon
subclass of: SO_0000010

position:219146:-1
position: 219146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219538:-1
position: 219538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219146-219538:-1:exon

SOPEG_RS01250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: tusD
locus tag: SOPEG_RS01250
old locus tag: SOPEG_0242
EC number: 2.8.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412097.1
GO function: GO:0016783 - sulfurtransferase activity [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase complex subunit TusD
translation: MSLNYCLMVTGPAYGNQRASSALQFAQALLACGHRLGIVFFYQEGVANANRLSAPAGDEVDLVRAWHDLAQQHRVALHVCVAAALRRGVTDALQASLQNRAGENLQPGFELSGLGTLVQAVLGCDRFIQF
SIO_010081: SOPEG_RS01250
subclass of: SO_0000673
so part of: SOPEG_RS01250
location: complement(219146..219538)
location: region:219146-219538:-1
so has part: feature:219146-219538:-1:exon

WP_025244018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219146-219538:-1:exon

SOPEG_RS01255
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01255
old locus tag: SOPEG_ps0243
pseudo: true
so part of: sequence
location: complement(219535..220258)
location: region:219535-220258:-1
so has part: feature:219535-220258:-1:exon
subclass of: SO_0000010

position:219535:-1
position: 219535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220258:-1
position: 220258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219535-220258:-1:exon

SOPEG_RS01255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01255
old locus tag: SOPEG_ps0243
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010296984.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transcriptional regulator
SIO_010081: SOPEG_RS01255
subclass of: SO_0000673
so part of: SOPEG_RS01255
location: complement(219535..220258)
location: region:219535-220258:-1
so has part: feature:219535-220258:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219535-220258:-1:exon

SOPEG_RS01260
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: fkpA
locus tag: SOPEG_RS01260
old locus tag: SOPEG_0244
so part of: sequence
location: complement(220533..221321)
location: region:220533-221321:-1
so has part: feature:220533-221321:-1:exon
subclass of: SO_0000010

position:220533:-1
position: 220533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221321:-1
position: 221321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220533-221321:-1:exon

SOPEG_RS01260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: fkpA
locus tag: SOPEG_RS01260
old locus tag: SOPEG_0244
EC number: 5.2.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004951215.1
GO function: GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FKBP-type peptidyl-prolyl cis-trans isomerase
translation: MKSLIKVSLLASTMAFALNASSALAADAAPSATSDKFKSSEDQAAYALGASLGRYMDNSLKEQEKLGIKLDKGQLISGVQDAFGNNSKLSDQEIEAMLQSFEARVKQAAQTKMEQEAKDNAAKGDKYRADYAKQKGVKKTANGVLYKVDKAGTGIGSAPTDSDTVVVNYKGTLVDGTEFDNSYKRGEPLSFRLDGVIPGWTEGLKHIKKGGQIQLVIPPEQAYGKTGVPGIPANSTLVFDVELLDIKLAAAAPVPDTGAQQK
SIO_010081: SOPEG_RS01260
subclass of: SO_0000673
so part of: SOPEG_RS01260
location: complement(220533..221321)
location: region:220533-221321:-1
so has part: feature:220533-221321:-1:exon

WP_025244019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220533-221321:-1:exon

SOPEG_RS01265
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01265
old locus tag: SOPEG_0245
so part of: sequence
location: 221643..221861
location: region:221643-221861:1
so has part: feature:221643-221861:1:exon
subclass of: SO_0000010

position:221643:1
position: 221643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221861:1
position: 221861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221643-221861:1:exon

SOPEG_RS01265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01265
old locus tag: SOPEG_0245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015841942.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SlyX family protein
translation: MELSQLEQRLELLEGRVAFQEIMIEELNQTVVAHQRDISRLQEQLRLLSDKLRAQNTSLIASQSEETPPPHY
SIO_010081: SOPEG_RS01265
subclass of: SO_0000673
so part of: SOPEG_RS01265
location: 221643..221861
location: region:221643-221861:1
so has part: feature:221643-221861:1:exon

WP_025244020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221643-221861:1:exon

SOPEG_RS01270
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: slyD
locus tag: SOPEG_RS01270
old locus tag: SOPEG_0246
so part of: sequence
location: complement(221911..222423)
location: region:221911-222423:-1
so has part: feature:221911-222423:-1:exon
subclass of: SO_0000010

position:221911:-1
position: 221911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222423:-1
position: 222423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221911-222423:-1:exon

SOPEG_RS01270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: slyD
locus tag: SOPEG_RS01270
old locus tag: SOPEG_0246
EC number: 5.2.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006709785.1
GO function: GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidylprolyl isomerase
translation: MKVVKDRVVSLAYQLRTEDGVLVDESPVSAPLEYLHGHGSLIPGLEKALEDHAAGDSFDISIEANDAYGPYDENLVQRVPKDVFMGVDELEVGMRFLAETDQGQVPVEITEIDGDHVVVDDNPMLAGQNLNFHVDVIAVREATEEELAHGHVHGEHGHDHEHKGGGCGCH
SIO_010081: SOPEG_RS01270
subclass of: SO_0000673
so part of: SOPEG_RS01270
location: complement(221911..222423)
location: region:221911-222423:-1
so has part: feature:221911-222423:-1:exon

WP_025244021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221911-222423:-1:exon

SOPEG_RS01275
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01275
old locus tag: SOPEG_0247
so part of: sequence
location: complement(222517..222720)
location: region:222517-222720:-1
so has part: feature:222517-222720:-1:exon
subclass of: SO_0000010

position:222517:-1
position: 222517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222720:-1
position: 222720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222517-222720:-1:exon

SOPEG_RS01275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01275
old locus tag: SOPEG_0247
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012147237.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YheV family putative zinc ribbon protein
translation: MTAKRKRFIAGATCPVCHSGDTLAVWREENSDRVGCVKCGYSQRQDDEMISAKRPDKEHIIGIFHPE
SIO_010081: SOPEG_RS01275
subclass of: SO_0000673
so part of: SOPEG_RS01275
location: complement(222517..222720)
location: region:222517-222720:-1
so has part: feature:222517-222720:-1:exon

WP_025244022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:222517-222720:-1:exon

SOPEG_RS01280
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: kefB
locus tag: SOPEG_RS01280
old locus tag: SOPEG_ps0248
pseudo: true
so part of: sequence
location: complement(222704..224530)
location: region:222704-224530:-1
so has part: feature:222704-224530:-1:exon
subclass of: SO_0000010

position:222704:-1
position: 222704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224530:-1
position: 224530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222704-224530:-1:exon

SOPEG_RS01280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: kefB
locus tag: SOPEG_RS01280
old locus tag: SOPEG_ps0248
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010297021.1
GO function: GO:0015503 - glutathione-regulated potassium exporter activity [Evidence IEA]
GO process: GO:0006813 - potassium ion transport [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glutathione-regulated potassium-efflux system protein KefB
SIO_010081: SOPEG_RS01280
subclass of: SO_0000673
so part of: SOPEG_RS01280
location: complement(222704..224530)
location: region:222704-224530:-1
so has part: feature:222704-224530:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:222704-224530:-1:exon

SOPEG_RS01285
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: kefG
locus tag: SOPEG_RS01285
old locus tag: SOPEG_ps0249
pseudo: true
so part of: sequence
location: complement(<224600..225070)
location: region:224600-225070:-1
so has part: feature:224600-225070:-1:exon
subclass of: SO_0000010

position:224600:-1
position: 224600
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:225070:-1
position: 225070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224600-225070:-1:exon

SOPEG_RS01285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: kefG
locus tag: SOPEG_RS01285
old locus tag: SOPEG_ps0249
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002215966.1
GO process: GO:0006813 - potassium ion transport [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glutathione-regulated potassium-efflux system ancillary protein KefG
SIO_010081: SOPEG_RS01285
subclass of: SO_0000673
so part of: SOPEG_RS01285
location: complement(<224600..225070)
location: region:224600-225070:-1
so has part: feature:224600-225070:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:224600-225070:-1:exon

SOPEG_RS25835
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS25835
so part of: sequence
location: 225201..225779
location: region:225201-225779:1
so has part: feature:225201-225779:1:exon
subclass of: SO_0000010

position:225201:1
position: 225201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225779:1
position: 225779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225201-225779:1:exon

SOPEG_RS25835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS25835
inference: COORDINATES: protein motif:HMM:NF012235.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MIVFSSLQIRRGTRVLLDNATATINPGQKVGLVGKNGCGKSTLLSLLKKELSADAGSVSLPANWAMAWVNQETPALDVPALEYVIDGDREYRQLESELLVANEKNDGHAIATLHGKLDTINAWTIRARAANLLSGLGFSQPQLTQPVRAFSGGSGACALISRKPCCAGLICCCWTSRPTIWIWMRSSGWKSG
SIO_010081: SOPEG_RS25835
subclass of: SO_0000673
so part of: SOPEG_RS25835
location: 225201..225779
location: region:225201-225779:1
so has part: feature:225201-225779:1:exon

WP_025244023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225201-225779:1:exon

SOPEG_RS30340
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS30340
pseudo: true
so part of: sequence
location: 225668..>226465
location: region:225668-226465:1
so has part: feature:225668-226465:1:exon
subclass of: SO_0000010

position:225668:1
position: 225668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226465:1
position: 226465
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225668-226465:1:exon

SOPEG_RS30340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS30340
inference: COORDINATES: protein motif:HMM:NF012235.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
SIO_010081: SOPEG_RS30340
subclass of: SO_0000673
so part of: SOPEG_RS30340
location: 225668..>226465
location: region:225668-226465:1
so has part: feature:225668-226465:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:225668-226465:1:exon

SOPEG_RS29045
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS29045
old locus tag: SOPEG_ps0251
so part of: sequence
location: 226442..227326
location: region:226442-227326:1
so has part: feature:226442-227326:1:exon
subclass of: SO_0000010

position:226442:1
position: 226442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227326:1
position: 227326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226442-227326:1:exon

SOPEG_RS29045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS29045
old locus tag: SOPEG_ps0251
EC number: 2.7.1.19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412107.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0008974 - phosphoribulokinase activity [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribulokinase
translation: MGGFGFQGDKVTDQTARFSGAGTTTTSLAFRKIFQQLNIRAAELEGDSFHHFTRPEMDLAIRKALDLGRHVSYFGPDANNFDLLERTFYHYGESGRGQARKYLHTYDEAVPYNQVPGTFTPWQPLPEPTDVLFYEGLHGGVVTEHNDVARHVDLLVGVVPIVNLEWIQKLMRDTNERGHSREAVMDSVVRSMEDYINFITPQFFRTHINFQRVPTVDTSNQFAAKAIPSLDESFVVIHFRGLDAMDFPYLLAMLQGSFISNINTLVVPGGKMGLAMELIMAPLVKQLLEGKQIR
SIO_010081: SOPEG_RS29045
subclass of: SO_0000673
so part of: SOPEG_RS29045
location: 226442..227326
location: region:226442-227326:1
so has part: feature:226442-227326:1:exon

WP_051419983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:226442-227326:1:exon

SOPEG_RS01300
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01300
old locus tag: SOPEG_ps0252
pseudo: true
so part of: sequence
location: complement(227433..227832)
location: region:227433-227832:-1
so has part: feature:227433-227832:-1:exon
subclass of: SO_0000010

position:227433:-1
position: 227433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227832:-1
position: 227832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227433-227832:-1:exon

SOPEG_RS01300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01300
old locus tag: SOPEG_ps0252
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004250077.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: OsmC family protein
SIO_010081: SOPEG_RS01300
subclass of: SO_0000673
so part of: SOPEG_RS01300
location: complement(227433..227832)
location: region:227433-227832:-1
so has part: feature:227433-227832:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:227433-227832:-1:exon

SOPEG_RS01305
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: crp
locus tag: SOPEG_RS01305
old locus tag: SOPEG_0253
so part of: sequence
location: 228150..228782
location: region:228150-228782:1
so has part: feature:228150-228782:1:exon
subclass of: SO_0000010

position:228150:1
position: 228150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228782:1
position: 228782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228150-228782:1:exon

SOPEG_RS01305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: crp
locus tag: SOPEG_RS01305
old locus tag: SOPEG_0253
inference: COORDINATES: similar to AA sequence:RefSeq:NP_462369.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cAMP-activated global transcriptional regulator CRP
translation: MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSSQMASRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGTR
SIO_010081: SOPEG_RS01305
subclass of: SO_0000673
so part of: SOPEG_RS01305
location: 228150..228782
location: region:228150-228782:1
so has part: feature:228150-228782:1:exon

WP_011412109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:228150-228782:1:exon

SOPEG_RS01310
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01310
old locus tag: SOPEG_ps0254
pseudo: true
so part of: sequence
location: 228835..230911
location: region:228835-230911:1
so has part: feature:228835-230911:1:exon
subclass of: SO_0000010

position:228835:1
position: 228835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230911:1
position: 230911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228835-230911:1:exon

SOPEG_RS01310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01310
old locus tag: SOPEG_ps0254
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001380096.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: YccS/YhfK family putative transporter
SIO_010081: SOPEG_RS01310
subclass of: SO_0000673
so part of: SOPEG_RS01310
location: 228835..230911
location: region:228835-230911:1
so has part: feature:228835-230911:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:228835-230911:1:exon

SOPEG_RS01315
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: istB
locus tag: SOPEG_RS01315
old locus tag: SOPEG_0255
so part of: sequence
location: complement(231188..231937)
location: region:231188-231937:-1
so has part: feature:231188-231937:-1:exon
subclass of: SO_0000010

position:231188:-1
position: 231188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231937:-1
position: 231937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231188-231937:-1:exon

SOPEG_RS01315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: istB
locus tag: SOPEG_RS01315
old locus tag: SOPEG_0255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025245096.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element ISSoEn3 family helper ATPase IstB
translation: MDTLLMALRELKLSAMVQALETQRELPGSYGELGFEERLSLMVEAENLHRKNNYIFRMRRQSQMRLQAKPEDIRYIPSRGVTPEQMRDLLGGQYLKYQKSILITGPTGTGKTWLSCALGEQACRQQYSVRYWRVGRLLAHLHQCQVNGTYLKQLKQLEKIELLILDNVGLESISPMQATMLLEVMEDRYDKSSSILISQLPVKKWYGLIENPTTADALLDRLVHPSYRLELKGESLRKEQGVASTGKID
SIO_010081: SOPEG_RS01315
subclass of: SO_0000673
so part of: SOPEG_RS01315
location: complement(231188..231937)
location: region:231188-231937:-1
so has part: feature:231188-231937:-1:exon

WP_025244026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:231188-231937:-1:exon

SOPEG_RS01320
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: istA
locus tag: SOPEG_RS01320
old locus tag: SOPEG_ps0256
pseudo: true
so part of: sequence
location: complement(231949..233499)
location: region:231949-233499:-1
so has part: feature:231949-233499:-1:exon
subclass of: SO_0000010

position:231949:-1
position: 231949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233499:-1
position: 233499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231949-233499:-1:exon

SOPEG_RS01320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: istA
locus tag: SOPEG_RS01320
old locus tag: SOPEG_ps0256
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025245097.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21-like element ISSoEn3 family transposase
SIO_010081: SOPEG_RS01320
subclass of: SO_0000673
so part of: SOPEG_RS01320
location: complement(231949..233499)
location: region:231949-233499:-1
so has part: feature:231949-233499:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:231949-233499:-1:exon

SOPEG_RS01325
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01325
old locus tag: SOPEG_0257
so part of: sequence
location: complement(233724..234947)
location: region:233724-234947:-1
so has part: feature:233724-234947:-1:exon
subclass of: SO_0000010

position:233724:-1
position: 233724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234947:-1
position: 234947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233724-234947:-1:exon

SOPEG_RS01325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01325
old locus tag: SOPEG_0257
EC number: 2.6.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019845172.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate aminotransferase family protein
translation: MKTDDAAVTRETFDQVILPVYAPAQFIPVQGKGSRVWDQQGKEYVDFSGGIAVTALGHCHPAMVAALKTQGETLWHTSNVFTNEPVLRLARKLINATFADRVFFANSGGEANEAAFKLARHYAITRHSPCKTKIIAFHNAFHGRTLFTVSVGGLPKYSDGFGPKPADIVHVPFNDLDAVKAVIDDHTCAIVLEPIQGEGGITPATPAFLRGVRALCDKHQALLVMDEVQCGMGRSGKLFTYMHYGVQPDILTTAKALGGGFPISAMLTTENIASAMAVGIHGTTYGGNPLACAVAEAALDVINSPEVLAGINECHERFIQALQDINEKYQVFTQVRGMGLLLGAELAPRYQGRGRDFLHAAALEGLMILNAGPDVIRFAPSLVVTFADIDEGLARFEKAVVQVTGAA
SIO_010081: SOPEG_RS01325
subclass of: SO_0000673
so part of: SOPEG_RS01325
location: complement(233724..234947)
location: region:233724-234947:-1
so has part: feature:233724-234947:-1:exon

WP_025244027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:233724-234947:-1:exon

SOPEG_RS01330
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01330
old locus tag: SOPEG_0258
so part of: sequence
location: complement(235064..235645)
location: region:235064-235645:-1
so has part: feature:235064-235645:-1:exon
subclass of: SO_0000010

position:235064:-1
position: 235064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235645:-1
position: 235645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235064-235645:-1:exon

SOPEG_RS01330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01330
old locus tag: SOPEG_0258
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412110.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminodeoxychorismate synthase component II
translation: MNGLLIIDNYDSFTWNLYQYFCELGAQVMVRRHDSLDIADIERLAPARLVISPGPGTPDQAGISLAAIRHFAGKLPILGVCLGHQAIAQAFGARIVRARKVMHGKTSVIRHDGQGVFADLAQPLTVTRYHSLVIDAASVPSCLAVTAWSQREGEPDEIMAIRHRSLPLEGVQFHPESIMSEQGHRLLANFLDR
SIO_010081: SOPEG_RS01330
subclass of: SO_0000673
so part of: SOPEG_RS01330
location: complement(235064..235645)
location: region:235064-235645:-1
so has part: feature:235064-235645:-1:exon

WP_038468034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:235064-235645:-1:exon

SOPEG_RS01335
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01335
old locus tag: SOPEG_ps0259
pseudo: true
so part of: sequence
location: complement(<235822..236382)
location: region:235822-236382:-1
so has part: feature:235822-236382:-1:exon
subclass of: SO_0000010

position:235822:-1
position: 235822
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:236382:-1
position: 236382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235822-236382:-1:exon

SOPEG_RS01335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01335
old locus tag: SOPEG_ps0259
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007753048.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: putative adenosine monophosphate-protein transferase Fic
SIO_010081: SOPEG_RS01335
subclass of: SO_0000673
so part of: SOPEG_RS01335
location: complement(<235822..236382)
location: region:235822-236382:-1
so has part: feature:235822-236382:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:235822-236382:-1:exon

SOPEG_RS01340
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01340
old locus tag: SOPEG_0260
so part of: sequence
location: complement(236391..237599)
location: region:236391-237599:-1
so has part: feature:236391-237599:-1:exon
subclass of: SO_0000010

position:236391:-1
position: 236391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237599:-1
position: 237599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236391-237599:-1:exon

SOPEG_RS01340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01340
old locus tag: SOPEG_0260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256-like element ISSoEn2 family transposase
translation: MDEKQLQALANELAKNLKTPEDLSHFDRLLKKISVEAALNAEMTHHLGYDKNQPKPGTNARNGYSTKTVTTGDGPLALRTPRDRDGSFEPQLVKKNQTRITGMDNQILSLYAKGMTTREIAAAFKELYDADVSPALVSKVTDAVMEQVVEWQNRPLDAVYPIVYLDCIVLKVRQDSRIINKSVFLALGINIEGQKELLGMWLAENEGAKFWLNVLTELKNRGLNDILIACVDGLKGFPDAINAVYPEARLQLCIVHMVRNSLRFVSWKDYKAVTRDLKAIYQAPTEEAGLQALEAFSSAWDIRYPQISRSWQANWANLATFFAYPTDIRKVIYTTNAIESLNSVIRHAIKKRKVFPTDDAVKKVVWLAIQAASQKWTMPLRDWRMAMSRFIIEFGDRLDGHF
SIO_010081: SOPEG_RS01340
subclass of: SO_0000673
so part of: SOPEG_RS01340
location: complement(236391..237599)
location: region:236391-237599:-1
so has part: feature:236391-237599:-1:exon

WP_025244030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:236391-237599:-1:exon

SOPEG_RS23785
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS23785
old locus tag: SOPEG_0261
so part of: sequence
location: complement(237695..237862)
location: region:237695-237862:-1
so has part: feature:237695-237862:-1:exon
subclass of: SO_0000010

position:237695:-1
position: 237695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237862:-1
position: 237862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237695-237862:-1:exon

SOPEG_RS23785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS23785
old locus tag: SOPEG_0261
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001727359.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YhfG family protein
translation: MKKMTEKQKARLFAKRRNENFCASTRLEGYDIAPVTLEGEALSARLDELRRHYER
SIO_010081: SOPEG_RS23785
subclass of: SO_0000673
so part of: SOPEG_RS23785
location: complement(237695..237862)
location: region:237695-237862:-1
so has part: feature:237695-237862:-1:exon

WP_071882110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237695-237862:-1:exon

SOPEG_RS01345
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
alternative label: rotA
gene: ppiA
locus tag: SOPEG_RS01345
old locus tag: SOPEG_ps0262
gene synonym: rotA
pseudo: true
so part of: sequence
location: complement(238393..238967)
location: region:238393-238967:-1
so has part: feature:238393-238967:-1:exon
subclass of: SO_0000010

position:238393:-1
position: 238393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238967:-1
position: 238967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238393-238967:-1:exon

SOPEG_RS01345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
alternative label: rotA
gene: ppiA
locus tag: SOPEG_RS01345
old locus tag: SOPEG_ps0262
gene synonym: rotA
inference: COORDINATES: similar to AA sequence:RefSeq:NP_462375.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: peptidylprolyl isomerase A
SIO_010081: SOPEG_RS01345
subclass of: SO_0000673
so part of: SOPEG_RS01345
location: complement(238393..238967)
location: region:238393-238967:-1
so has part: feature:238393-238967:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:238393-238967:-1:exon

SOPEG_RS01350
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: tsgA
locus tag: SOPEG_RS01350
old locus tag: SOPEG_0263
so part of: sequence
location: 239267..240451
location: region:239267-240451:1
so has part: feature:239267-240451:1:exon
subclass of: SO_0000010

position:239267:1
position: 239267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240451:1
position: 240451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239267-240451:1:exon

SOPEG_RS01350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: tsgA
locus tag: SOPEG_RS01350
old locus tag: SOPEG_0263
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019084080.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter TsgA
translation: MNQNNKLRLTWISFFSYGLTGALVIVTGVVLGNIADYFQLPLSSMSNTFTFLNSGILAAIFLNAWLMEIISLKRQLMFGFLLMVLAVLELMSGHNLTVFSLSMFVLGVVSGITMSIGTYLITHLYAGRQRGSRLLFTDSFFSMAGTLFPMLAGVLLARHITWYWVYACIGVVYVVIFVLTLLSDFPALKSRATAGQTLQTREPWGPGVALLALAALCYILGQLGFISWVPEYATTRFQMDIQQAGGLVSHFWTAYMVGMWVFSALLRFFDLQRIVTVLAALSAAFMYLFIHAGDPAWLPWCLLALGFVSSAIYTTIITLGSQQTRVTSPRLVNFILTCGTIGTMLTFVVTGPIVARYGVGAALQTSNLLYVTVFILCLLLGFVSRHRTHSQAIV
SIO_010081: SOPEG_RS01350
subclass of: SO_0000673
so part of: SOPEG_RS01350
location: 239267..240451
location: region:239267-240451:1
so has part: feature:239267-240451:1:exon

WP_025244031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:239267-240451:1:exon

SOPEG_RS01355
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01355
old locus tag: SOPEG_ps0264
pseudo: true
so part of: sequence
location: 240743..241541
location: region:240743-241541:1
so has part: feature:240743-241541:1:exon
subclass of: SO_0000010

position:240743:1
position: 240743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241541:1
position: 241541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240743-241541:1:exon

SOPEG_RS01355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01355
old locus tag: SOPEG_ps0264
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016538788.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: HoxN/HupN/NixA family nickel/cobalt transporter
SIO_010081: SOPEG_RS01355
subclass of: SO_0000673
so part of: SOPEG_RS01355
location: 240743..241541
location: region:240743-241541:1
so has part: feature:240743-241541:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:240743-241541:1:exon

SOPEG_RS01360
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01360
old locus tag: SOPEG_ps0265
so part of: sequence
location: complement(241725..241982)
location: region:241725-241982:-1
so has part: feature:241725-241982:-1:exon
subclass of: SO_0000010

position:241725:-1
position: 241725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241982:-1
position: 241982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241725-241982:-1:exon

SOPEG_RS01360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01360
old locus tag: SOPEG_ps0265
inference: COORDINATES: protein motif:HMM:NF018294.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1127 domain-containing protein
translation: MKTSPQCLIASIPAATDPVARPATPGWSGFVRRGWARLRRWRLYRRDKQILLALSDDQLRDIGLTRGDIHHYNEALHQNWRARRR
SIO_010081: SOPEG_RS01360
subclass of: SO_0000673
so part of: SOPEG_RS01360
location: complement(241725..241982)
location: region:241725-241982:-1
so has part: feature:241725-241982:-1:exon

WP_025244032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:241725-241982:-1:exon

SOPEG_RS01365
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01365
old locus tag: SOPEG_ps0266
pseudo: true
so part of: sequence
location: 242144..243612
location: region:242144-243612:1
so has part: feature:242144-243612:1:exon
subclass of: SO_0000010

position:242144:1
position: 242144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243612:1
position: 243612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242144-243612:1:exon

SOPEG_RS01365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01365
old locus tag: SOPEG_ps0266
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008108406.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: PLP-dependent aminotransferase family protein
SIO_010081: SOPEG_RS01365
subclass of: SO_0000673
so part of: SOPEG_RS01365
location: 242144..243612
location: region:242144-243612:1
so has part: feature:242144-243612:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:242144-243612:1:exon

SOPEG_RS01370
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01370
old locus tag: SOPEG_ps0267
pseudo: true
so part of: sequence
location: complement(243625..244645)
location: region:243625-244645:-1
so has part: feature:243625-244645:-1:exon
subclass of: SO_0000010

position:243625:-1
position: 243625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244645:-1
position: 244645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243625-244645:-1:exon

SOPEG_RS01370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01370
old locus tag: SOPEG_ps0267
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013027500.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: amidohydrolase family protein
SIO_010081: SOPEG_RS01370
subclass of: SO_0000673
so part of: SOPEG_RS01370
location: complement(243625..244645)
location: region:243625-244645:-1
so has part: feature:243625-244645:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:243625-244645:-1:exon

SOPEG_RS01375
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: trpS
locus tag: SOPEG_RS01375
old locus tag: SOPEG_0268
so part of: sequence
location: complement(244827..245831)
location: region:244827-245831:-1
so has part: feature:244827-245831:-1:exon
subclass of: SO_0000010

position:244827:-1
position: 244827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245831:-1
position: 245831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244827-245831:-1:exon

SOPEG_RS01375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: trpS
locus tag: SOPEG_RS01375
old locus tag: SOPEG_0268
EC number: 6.1.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229207.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO process: GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tryptophan--tRNA ligase
translation: MSKPIVFSGAQPSGELTIGNYMGALRQWVSMQDDYDCIYCIVDLHAITARQDAQQLRKATLDVLALYLACGIDPARSTVFIQSHMPEHSQLGWLLNCYTYFGELSRMTQFKDKSARYAENINAGLFDYPVLMAADILLYQTNQVPVGEDQKQHLELSRDIAKRFNALYGDIFTIPEPFIPKSGARVMSLLDPTKKMSKSDDNRNNVITLLEDPKSVVKKLKRAVTDSDEPSVVRYDPVTKPGVSNLLDILSGVTGTPVAELEQAFVGKMYGHLKTAVADAVSEMLTSLQARYHALRADEAYLNQVLRDGAEKARAQASVTLAKVYETVGFVAKP
SIO_010081: SOPEG_RS01375
subclass of: SO_0000673
so part of: SOPEG_RS01375
location: complement(244827..245831)
location: region:244827-245831:-1
so has part: feature:244827-245831:-1:exon

WP_025244033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244827-245831:-1:exon

SOPEG_RS01380
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01380
old locus tag: SOPEG_0269
so part of: sequence
location: complement(245833..246534)
location: region:245833-246534:-1
so has part: feature:245833-246534:-1:exon
subclass of: SO_0000010

position:245833:-1
position: 245833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246534:-1
position: 246534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245833-246534:-1:exon

SOPEG_RS01380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01380
old locus tag: SOPEG_0269
EC number: 3.1.3.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011193233.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoglycolate phosphatase
translation: MREERPIRGITFDLDGTLTDSAPGLTAALDRTLSEQGLPPAGLARIATWIGNGADVLVERALRWVTQTEPDAALQRATRLRFDEHYAGTVAAGSTLFPEVADTLARLALLGLPMALVTNKPTPFVAPLLASLGIELHFALIIGGDDVSAKKPHPAPLYLVLGHSGLYARELLFVGDSRNDILAAKAAGCPSAGMTYGYNYGEAITLSHPDYVLDRFADLLPVLGLSPSVNQDV
SIO_010081: SOPEG_RS01380
subclass of: SO_0000673
so part of: SOPEG_RS01380
location: complement(245833..246534)
location: region:245833-246534:-1
so has part: feature:245833-246534:-1:exon

WP_025244034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245833-246534:-1:exon

SOPEG_RS01385
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rpe
locus tag: SOPEG_RS01385
old locus tag: SOPEG_0270
so part of: sequence
location: complement(246527..247207)
location: region:246527-247207:-1
so has part: feature:246527-247207:-1:exon
subclass of: SO_0000010

position:246527:-1
position: 246527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247207:-1
position: 247207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246527-247207:-1:exon

SOPEG_RS01385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rpe
locus tag: SOPEG_RS01385
old locus tag: SOPEG_0270
EC number: 5.1.3.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412113.1
GO function: GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
GO process: GO:0006098 - pentose-phosphate shunt [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribulose-phosphate 3-epimerase
translation: MKNFLIAPSILSADFARMGEDTARVISAGADVVHFDVMDNHYVPNLTMGPMVLKALRSYGITAPIDVHLMVKPVDRLIPDFAAAGASYITFHPEASEHIDRSLQLIKEHGCKAGLVFNPATPLSCLEYVLDKLDVILLMSVNPGFGGQSFLPSTLDKLRQARRLIDINGRDIRLEVDGGVKVDNIGAIAAAGADMFVAGSAIFSQPDYRTVIDAMRHELAGAAGNA
SIO_010081: SOPEG_RS01385
subclass of: SO_0000673
so part of: SOPEG_RS01385
location: complement(246527..247207)
location: region:246527-247207:-1
so has part: feature:246527-247207:-1:exon

WP_025244035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246527-247207:-1:exon

SOPEG_RS01390
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: dam
locus tag: SOPEG_RS01390
old locus tag: SOPEG_0271
so part of: sequence
location: complement(247255..248067)
location: region:247255-248067:-1
so has part: feature:247255-248067:-1:exon
subclass of: SO_0000010

position:247255:-1
position: 247255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248067:-1
position: 248067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247255-248067:-1:exon

SOPEG_RS01390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: dam
locus tag: SOPEG_RS01390
old locus tag: SOPEG_0271
EC number: 2.1.1.72
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014888435.1
GO function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO process: GO:0032775 - DNA methylation on adenine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenine-specific DNA-methyltransferase
translation: MKKNRAFLKWAGGKYPLIEAIRRHLPAGDCLIEPFVGAGSVFLNTDYDRYILADINSDLINLFNIVKERPNDFIRDARELFAADANISEVYYLLRSEFNLCTDAHRRAVLFLYLNRHCYNGLCRYNLSGEFNVPFGRYKKPYFPELELYRFAEKARRAVFVCEHYQQTLSRAEPGSVAYCDPPYVPLSTTANFTAYHTNSFNLTEQQNLARLASQLARESRIPVLISNHDTALTRKWYGDAVLHHVTARRTISSNIFGRSSVNELLALYL
SIO_010081: SOPEG_RS01390
subclass of: SO_0000673
so part of: SOPEG_RS01390
location: complement(247255..248067)
location: region:247255-248067:-1
so has part: feature:247255-248067:-1:exon

WP_025244036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247255-248067:-1:exon

SOPEG_RS01395
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01395
old locus tag: SOPEG_0272
so part of: sequence
location: complement(248151..249188)
location: region:248151-249188:-1
so has part: feature:248151-249188:-1:exon
subclass of: SO_0000010

position:248151:-1
position: 248151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249188:-1
position: 249188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248151-249188:-1:exon

SOPEG_RS01395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01395
old locus tag: SOPEG_0272
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015962196.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SPOR domain-containing protein
translation: MDEFKSEDELRPDSSDRRPPRQRKGPIVPKVPVSRQHLMIGIGILVLLLLVISIGSALKSPSRTDSSHQSADNNGQRNIDLSGSTSGSDATSSSPGATAPAANNSQTNGVPAAVNGSDGASSPQELRGPQVASTPTEAAPVTTPSGQQRVELPGNMADALTQQGNQVNGVAAQMNGQGPVSTLPTAAATLTPGSRSVTQPHKSASTAPAKAPAAARREPKQTPMVPAATAPKAASSARAPSAPAPSAAAGSAAGTIQSAPAGYYTLQLSSASQPATLNAYARQQQLSHYWVYQTRRDGKPWYVLVNGVYPSLSQVKNAVAQLPADVQAKKPWARQIGQVKKDQNN
SIO_010081: SOPEG_RS01395
subclass of: SO_0000673
so part of: SOPEG_RS01395
location: complement(248151..249188)
location: region:248151-249188:-1
so has part: feature:248151-249188:-1:exon

WP_025244037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:248151-249188:-1:exon

SOPEG_RS01400
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: aroB
locus tag: SOPEG_RS01400
old locus tag: SOPEG_0273
so part of: sequence
location: complement(249293..250378)
location: region:249293-250378:-1
so has part: feature:249293-250378:-1:exon
subclass of: SO_0000010

position:249293:-1
position: 249293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250378:-1
position: 250378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249293-250378:-1:exon

SOPEG_RS01400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: aroB
locus tag: SOPEG_RS01400
old locus tag: SOPEG_0273
EC number: 4.2.3.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412116.1
GO function: GO:0003856 - 3-dehydroquinate synthase activity [Evidence IEA]
GO process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-dehydroquinate synthase
translation: MEMITVTLGERSYPITIAAGLFNDPASFWPLTRGDNAMLVTNDRLAPLYLDSLSGRLRQAGVKVDRVVLPDGEQNKSLTVLDQVFTALLAKPHGRDTTIIALGGGVIGDLAGFAAASYQRGVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPASVVIDLDCLNTLPRRELSSGLAEVIKYGIILDAVFFAWLEDNLDALLALEPRALAYCIRRCCELKADVVAADEREQGQRALLNLGHTYGHAIETHMGYGNWLHGEAVAAGMVMAVRAARRLGQFSDADAERVSALLLRAGLPVSGPAEMAAEDYLPHMMRDKKVIAGQLRLVLPVTLGNAEVHAGVADDMVVASIKDCQA
SIO_010081: SOPEG_RS01400
subclass of: SO_0000673
so part of: SOPEG_RS01400
location: complement(249293..250378)
location: region:249293-250378:-1
so has part: feature:249293-250378:-1:exon

WP_025244038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:249293-250378:-1:exon

SOPEG_RS01405
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: aroK
locus tag: SOPEG_RS01405
old locus tag: SOPEG_0274
so part of: sequence
location: complement(250419..250940)
location: region:250419-250940:-1
so has part: feature:250419-250940:-1:exon
subclass of: SO_0000010

position:250419:-1
position: 250419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250940:-1
position: 250940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250419-250940:-1:exon

SOPEG_RS01405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: aroK
locus tag: SOPEG_RS01405
old locus tag: SOPEG_0274
EC number: 2.7.1.71
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: shikimate kinase AroK
translation: MAEKRNIILVGPMGAGKSTIGRQLAQQLNMEFFDSDQEIERRTGADVGWVFDVEGEDGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIEKQLARTQRDKKRPLLQVEAPPRDVLEALARERNPLYEEIADVTIRTDEQSAKVVANQIINMLESS
SIO_010081: SOPEG_RS01405
subclass of: SO_0000673
so part of: SOPEG_RS01405
location: complement(250419..250940)
location: region:250419-250940:-1
so has part: feature:250419-250940:-1:exon

WP_025244039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:250419-250940:-1:exon

SOPEG_RS01410
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01410
old locus tag: SOPEG_ps0275
pseudo: true
so part of: sequence
location: complement(251275..252489)
location: region:251275-252489:-1
so has part: feature:251275-252489:-1:exon
subclass of: SO_0000010

position:251275:-1
position: 251275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252489:-1
position: 252489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251275-252489:-1:exon

SOPEG_RS01410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01410
old locus tag: SOPEG_ps0275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012763975.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: secretin N-terminal domain-containing protein
SIO_010081: SOPEG_RS01410
subclass of: SO_0000673
so part of: SOPEG_RS01410
location: complement(251275..252489)
location: region:251275-252489:-1
so has part: feature:251275-252489:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:251275-252489:-1:exon

SOPEG_RS01420
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01420
old locus tag: SOPEG_ps0277
so part of: sequence
location: complement(253171..253707)
location: region:253171-253707:-1
so has part: feature:253171-253707:-1:exon
subclass of: SO_0000010

position:253171:-1
position: 253171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253707:-1
position: 253707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253171-253707:-1:exon

SOPEG_RS01420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01420
old locus tag: SOPEG_ps0277
inference: COORDINATES: protein motif:HMM:NF016992.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PilN domain-containing protein
translation: MEQVNLWPWRQARLRRRVRCLLLLTLVPLLLASALIATPAVYWRHQRLTLETRLAETHPSPEAAQAEPTARAAALSASAARTTQRQRRLAIANQRYVHLFRQLPALLPPQLWLTEIEQRGDRLYISGCSEGYPPVVTLRRRLIDHATLPDFRWREVRRRDALRWQFFLVAAWPPEEGA
SIO_010081: SOPEG_RS01420
subclass of: SO_0000673
so part of: SOPEG_RS01420
location: complement(253171..253707)
location: region:253171-253707:-1
so has part: feature:253171-253707:-1:exon

WP_025244041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:253171-253707:-1:exon

SOPEG_RS01425
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01425
old locus tag: SOPEG_ps0278
so part of: sequence
location: complement(253795..254124)
location: region:253795-254124:-1
so has part: feature:253795-254124:-1:exon
subclass of: SO_0000010

position:253795:-1
position: 253795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254124:-1
position: 254124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253795-254124:-1:exon

SOPEG_RS01425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01425
old locus tag: SOPEG_ps0278
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAFDRWRIGMDIEPDVLRALALSRERTQWCCRGWWQFPLPMGRDAQGDPCPVAATVDALRRQLPRRLSVRLCLTGLPVTLTRLRLEPRFAAGASVCQWRLSRRAAGFRL
SIO_010081: SOPEG_RS01425
subclass of: SO_0000673
so part of: SOPEG_RS01425
location: complement(253795..254124)
location: region:253795-254124:-1
so has part: feature:253795-254124:-1:exon

WP_025244042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:253795-254124:-1:exon

SOPEG_RS01430
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: mrcA
locus tag: SOPEG_RS01430
old locus tag: SOPEG_ps0280
pseudo: true
so part of: sequence
location: 254244..256746
location: region:254244-256746:1
so has part: feature:254244-256746:1:exon
subclass of: SO_0000010

position:254244:1
position: 254244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256746:1
position: 256746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254244-256746:1:exon

SOPEG_RS01430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: mrcA
locus tag: SOPEG_RS01430
old locus tag: SOPEG_ps0280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005121637.1
GO function: GO:0008658 - penicillin binding [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA
SIO_010081: SOPEG_RS01430
subclass of: SO_0000673
so part of: SOPEG_RS01430
location: 254244..256746
location: region:254244-256746:1
so has part: feature:254244-256746:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:254244-256746:1:exon

SOPEG_RS01435
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: nudE
locus tag: SOPEG_RS01435
old locus tag: SOPEG_0281
so part of: sequence
location: complement(256899..257462)
location: region:256899-257462:-1
so has part: feature:256899-257462:-1:exon
subclass of: SO_0000010

position:256899:-1
position: 256899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257462:-1
position: 257462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256899-257462:-1:exon

SOPEG_RS01435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: nudE
locus tag: SOPEG_RS01435
old locus tag: SOPEG_0281
EC number: 3.6.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412120.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ADP compounds hydrolase NudE
translation: MDKNLQKPKIHRVATVAQSRLFTVESVDLEFSNGARRVYERMKPSHREAVMIVPVLDDHLLLIREYGAGIEDYELGFPKGLIDPGEGVMEAANRELMEEAGFGGRAFTFLRRLSMAPSYFSSKMHIVVAQDLYPQRLQGDEPEPLPLVRWPISRMLALLDEPDFCEARDVSALFLAHAWLNQAPRSK
SIO_010081: SOPEG_RS01435
subclass of: SO_0000673
so part of: SOPEG_RS01435
location: complement(256899..257462)
location: region:256899-257462:-1
so has part: feature:256899-257462:-1:exon

WP_025244043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256899-257462:-1:exon

SOPEG_RS23790
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS23790
old locus tag: SOPEG_ps0282
pseudo: true
so part of: sequence
location: 257814..259346
location: region:257814-259346:1
so has part: feature:257814-259346:1:exon
subclass of: SO_0000010

position:257814:1
position: 257814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259346:1
position: 259346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257814-259346:1:exon

SOPEG_RS23790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS23790
old locus tag: SOPEG_ps0282
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412121.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IgaA/UmoB family intracellular growth attenuator
SIO_010081: SOPEG_RS23790
subclass of: SO_0000673
so part of: SOPEG_RS23790
location: 257814..259346
location: region:257814-259346:1
so has part: feature:257814-259346:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:257814-259346:1:exon

SOPEG_RS01445
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: yrfG
locus tag: SOPEG_RS01445
old locus tag: SOPEG_ps0283
pseudo: true
so part of: sequence
location: 259465..260162
location: region:259465-260162:1
so has part: feature:259465-260162:1:exon
subclass of: SO_0000010

position:259465:1
position: 259465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260162:1
position: 260162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259465-260162:1:exon

SOPEG_RS01445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: yrfG
locus tag: SOPEG_RS01445
old locus tag: SOPEG_ps0283
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412122.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: GMP/IMP nucleotidase
SIO_010081: SOPEG_RS01445
subclass of: SO_0000673
so part of: SOPEG_RS01445
location: 259465..260162
location: region:259465-260162:1
so has part: feature:259465-260162:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:259465-260162:1:exon

SOPEG_RS01450
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: hslR
locus tag: SOPEG_RS01450
old locus tag: SOPEG_0284
so part of: sequence
location: 260159..260581
location: region:260159-260581:1
so has part: feature:260159-260581:1:exon
subclass of: SO_0000010

position:260159:1
position: 260159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260581:1
position: 260581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260159-260581:1:exon

SOPEG_RS01450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: hslR
locus tag: SOPEG_RS01450
old locus tag: SOPEG_0284
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412123.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome-associated heat shock protein Hsp15
translation: MKPKDVNDEIPAVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSKPGKTMELGAEITLRQGNDEHQVSVRAISNQHRPASDAQQLYQETDASIAKREKMAEARKQNALTMPHPDRRPDKKERRNLIKFKYGEPGEAQ
SIO_010081: SOPEG_RS01450
subclass of: SO_0000673
so part of: SOPEG_RS01450
location: 260159..260581
location: region:260159-260581:1
so has part: feature:260159-260581:1:exon

WP_025244047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:260159-260581:1:exon

SOPEG_RS01455
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: hslO
locus tag: SOPEG_RS01455
old locus tag: SOPEG_0285
so part of: sequence
location: 260614..261492
location: region:260614-261492:1
so has part: feature:260614-261492:1:exon
subclass of: SO_0000010

position:260614:1
position: 260614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261492:1
position: 261492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260614-261492:1:exon

SOPEG_RS01455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: hslO
locus tag: SOPEG_RS01455
old locus tag: SOPEG_0285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412124.1
GO function: GO:0051082 - unfolded protein binding [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hsp33 family molecular chaperone HslO
translation: MTHQDQLHRYLFEKYSVRGELVSLQETYRQVLGQHNYPPAVKTLLGELLVATSLLTATLKFTGEITVQLQGDGPLHLAVINGDDRQNMRGLARVDGEIAADATLAQMVGNGYLVITLTPAEGERYQGVVGLEGPHLAACLENYFLQSEQLPTRLFIRTGEHQGQVAAAGLLLQVLPGQDTRADDFDHLTQLTATVKGNELFALPANDVLYRLYHQDEVTVYPPQSVQFLCTCSRQRCADALITLGEQELNDMLEQDGEVDMHCDFCGSHYRFDADAIAALQRQAAEGRAPQA
SIO_010081: SOPEG_RS01455
subclass of: SO_0000673
so part of: SOPEG_RS01455
location: 260614..261492
location: region:260614-261492:1
so has part: feature:260614-261492:1:exon

WP_025244048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:260614-261492:1:exon

SOPEG_RS01460
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: pckA
locus tag: SOPEG_RS01460
old locus tag: SOPEG_0286
so part of: sequence
location: 261688..263307
location: region:261688-263307:1
so has part: feature:261688-263307:1:exon
subclass of: SO_0000010

position:261688:1
position: 261688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263307:1
position: 263307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261688-263307:1:exon

SOPEG_RS01460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: pckA
locus tag: SOPEG_RS01460
old locus tag: SOPEG_0286
EC number: 4.1.1.49
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016942943.1
GO function: GO:0004612 - phosphoenolpyruvate carboxykinase (ATP) activity [Evidence IEA]
GO process: GO:0006094 - gluconeogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoenolpyruvate carboxykinase (ATP)
translation: MVSERITPQQWLSYGITGCRELMYNPDYNQLFAEETDPALSGFERGTLTRSGAVAVDTGIFTGRSPFDKYLVRDAKTRDTLWWSDQGKGANDNHPLDQQTWDHLKKRVGQQLSGKRLFVIDAFCGANEDSRLKVRFITEVAWQAHFVKNMFIRPSDEELRGFEPDFVVLNGAKCTNSDWREQGLHSENFVAFNLTEGIQLIGGTWYGGEMKKGLFSVMNYLLPLKGIASMHCSANVGADEDVALFFGLSGTGKTTLSTDPRRRLIGDDEHGWDDDGVFNFEGGCYAKTIRLSPEAEPEIYQAIRRNALLENVVVRADGSVDYDDGSKTENARVSYPIDHIENIVKPVSRAGHATRVIFLTADAFCVLPPVASLSMEQAQYHFLSGFTAKLAGTERGVVAPVPTFSACFGAAFLSLHPTAYADVLTKRMNAAGAGAFLVNTGWNGSGKRISLKDTRAIINAILRGDIDDAPTATLPIFNLTMPTALPGVDGAILDPRATYANAGEWRTKAEDLAQRFIDNFAKFTDTPAGAALVSAGPRR
SIO_010081: SOPEG_RS01460
subclass of: SO_0000673
so part of: SOPEG_RS01460
location: 261688..263307
location: region:261688-263307:1
so has part: feature:261688-263307:1:exon

WP_025244049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261688-263307:1:exon

SOPEG_RS01465
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: envZ
locus tag: SOPEG_RS01465
old locus tag: SOPEG_0287
so part of: sequence
location: complement(263480..264805)
location: region:263480-264805:-1
so has part: feature:263480-264805:-1:exon
subclass of: SO_0000010

position:263480:-1
position: 263480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264805:-1
position: 264805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263480-264805:-1:exon

SOPEG_RS01465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: envZ
locus tag: SOPEG_RS01465
old locus tag: SOPEG_0287
EC number: 2.7.13.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412126.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
GO process: GO:0016310 - phosphorylation [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: two-component system sensor histidine kinase EnvZ
translation: MMRWRISPRSSFARSLLLIVTLLFVSLVTTYLVVLNFAILPSLQQFNKVLAYEVRMLMTDRLQLEDGTLLEVSPAFRREIYRELGISLYTNPAAEESGLRWAQHYEFLSQQMAQQLGGPTDVRVEVIKNSPVVWLKTWLSPDIWVRIPLTEIHQGDFSPLFRYTLAIMLLAIGGAWLFIRIQNRPLVDLEHAALQVGKGIIPPPLREYGASEVRSVTRAFNQMTAGVKLLADDRTLLMAGVSHDLRTPLTRIRLATEMMSAEDGYLAESINKDIEECNAIIEQFIDYLRTGQEMQTEMADLNSILTEVVAAESGYERVIETDICGEELIVNVNPLSIKRAALNMVVNAARYGNGWIKVNSGRDTNRVWFEVEDDGPGIKPDQLQYLFQPFVRGDSARSTSGTGLGLAIVQRIIDAHAGKLEIGRSARQGLRIRANLPLPVA
SIO_010081: SOPEG_RS01465
subclass of: SO_0000673
so part of: SOPEG_RS01465
location: complement(263480..264805)
location: region:263480-264805:-1
so has part: feature:263480-264805:-1:exon

WP_038468042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:263480-264805:-1:exon

SOPEG_RS01470
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: ompR
locus tag: SOPEG_RS01470
old locus tag: SOPEG_0288
so part of: sequence
location: complement(264802..265521)
location: region:264802-265521:-1
so has part: feature:264802-265521:-1:exon
subclass of: SO_0000010

position:264802:-1
position: 264802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265521:-1
position: 265521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264802-265521:-1:exon

SOPEG_RS01470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: ompR
locus tag: SOPEG_RS01470
old locus tag: SOPEG_0288
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014646135.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: two-component system response regulator OmpR
translation: MQDNYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPGEDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLRRQANELPGAPSQEEAIIAFGKFKLNLGTREMFREDEPMPLTSGEFAVLKALVSHPREPLSRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAHPRYIQTVWGLGYVFVPDGSKA
SIO_010081: SOPEG_RS01470
subclass of: SO_0000673
so part of: SOPEG_RS01470
location: complement(264802..265521)
location: region:264802-265521:-1
so has part: feature:264802-265521:-1:exon

WP_025244050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264802-265521:-1:exon

SOPEG_RS01475
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: greB
locus tag: SOPEG_RS01475
old locus tag: SOPEG_ps0289
so part of: sequence
location: complement(265792..266235)
location: region:265792-266235:-1
so has part: feature:265792-266235:-1:exon
subclass of: SO_0000010

position:265792:-1
position: 265792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266235:-1
position: 266235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265792-266235:-1:exon

SOPEG_RS01475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: greB
locus tag: SOPEG_RS01475
old locus tag: SOPEG_ps0289
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016942941.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO process: GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription elongation factor GreB
translation: MKSNLITRQGYRELHDELDHLWKRYRPEITEKVAWAASLGDRSENADYHYNKKILREIDRRVRYLRRVLKEARVVDYSPQQEGRVFFGAWVEVESPEGETKRFRIAGPDEIYKHKDYISIDSPMARALIKKAVDDEAEVMTPGGRRT
SIO_010081: SOPEG_RS01475
subclass of: SO_0000673
so part of: SOPEG_RS01475
location: complement(265792..266235)
location: region:265792-266235:-1
so has part: feature:265792-266235:-1:exon

WP_038468044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:265792-266235:-1:exon

SOPEG_RS01480
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01480
old locus tag: SOPEG_0290
so part of: sequence
location: 266387..268714
location: region:266387-268714:1
so has part: feature:266387-268714:1:exon
subclass of: SO_0000010

position:266387:1
position: 266387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268714:1
position: 268714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266387-268714:1:exon

SOPEG_RS01480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01480
old locus tag: SOPEG_0290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011095594.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tex family protein
translation: MNKESLNHLIAGELKARAEQVDAAVRLLDEGNTVPFIARYRKEVTGGLDDTQLRTLETRLGYLRELDERRQSILKSIDEQGKLTEALAAAIQGTLSKTELEDLYLPYKPKRRTRSQIAIEAGLAPLADRLWQDASMDPESAAAEFVNPDAGVADVKAALDGARYILMERFAEDAALLAKIRAYLWKNAHLVSRVVPGKEEDGAKFRDYFDHHEPLSQVPSHRALAMLRGRNEGVLQLALNADPHTDEPPRASYCEEMIADHLQVRFNQAPADGWRKSVISWTWRIKILMHLETELMGNMREKAEEEAIQVFARNMHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDILYPHTGQADKAAAAVAALCLKHHVELVAIGNGTASLETERFYAEVQKRYPDVKGQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQSQLAKKLDTVVEDCVNAVGVDLNTASVPLLIRVAGLTRMMAQNIVNWRDENGRFRNRQQLLKVPRLGPKAFVQCAGFLRINHGDNPLDASTVHPESYPVVERILQATEKSLSDLMGDPSTLRGLSPSHFTDERVGLPTVTDIIKELEKPGRDPRPEFKTATFADGVETLQDLSQGMVLEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDRFIDDPHKVVKAGDIVKVKVMDVDMARKRIALTMRLDERPGEAPARRDMGERRRDNGATASRPPARGGGRQSGNAAGGRAGQTALKTAGP
SIO_010081: SOPEG_RS01480
subclass of: SO_0000673
so part of: SOPEG_RS01480
location: 266387..268714
location: region:266387-268714:1
so has part: feature:266387-268714:1:exon

WP_025244051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266387-268714:1:exon

SOPEG_RS01485
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: feoA
locus tag: SOPEG_RS01485
old locus tag: SOPEG_0291
so part of: sequence
location: 269472..269705
location: region:269472-269705:1
so has part: feature:269472-269705:1:exon
subclass of: SO_0000010

position:269472:1
position: 269472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269705:1
position: 269705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269472-269705:1:exon

SOPEG_RS01485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: feoA
locus tag: SOPEG_RS01485
old locus tag: SOPEG_0291
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412129.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferrous iron transporter A
translation: MQLQLQLQYHYKITGYAKEIPPAFRQKMLSLGMLPGSSFQVVRVAPLGDPVQIEVRRVQLVLRKKDLSLLLLSRTDH
SIO_010081: SOPEG_RS01485
subclass of: SO_0000673
so part of: SOPEG_RS01485
location: 269472..269705
location: region:269472-269705:1
so has part: feature:269472-269705:1:exon

WP_025244052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:269472-269705:1:exon

SOPEG_RS01490
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: feoB
locus tag: SOPEG_RS01490
old locus tag: SOPEG_0292
so part of: sequence
location: 269782..272085
location: region:269782-272085:1
so has part: feature:269782-272085:1:exon
subclass of: SO_0000010

position:269782:1
position: 269782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272085:1
position: 272085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269782-272085:1:exon

SOPEG_RS01490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: feoB
locus tag: SOPEG_RS01490
old locus tag: SOPEG_0292
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011906130.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO process: GO:0006826 - iron ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fe(2+) transporter permease subunit FeoB
translation: MTTRTVALIGNPNAGKTTLFNQLTGARQRVGNWAGVTVERKEGCFTTAAQHITLVDLPGAYSLTTLSQQSSLDEQIACRYILERQADVLINVVDAANLERNLYLTLQLLELGIPCIVALNMLDIACSQGINIDIPALERRLGCPVIPLVSTRAEGIETLKARLDGPLPAAPSLTVDYPPAVRQAVEQLQPFTPHAYSPRQRRWLALHMLEGDIHSRELLTSPQRLESLRAGLQQDAALAIADARYATIIALCQAVSNGHLTQTNCLTARLDAVLLNRWLGVPLFFMVMYLMFILAINLGGALQPLFEGGSAALFIDGTQWLGYQLHAPQWLTLLLAQGVGGGINTVLPLIPQIGIMYLCLSFLEDSGYMARAAFVIDRLMQFLGLPGKSFVPLIVGFGCNVPSVMGARTLNAPRERLMTIMMAPFMSCGARLAIFAVFAATFFGQYGATLVFSLYLLGIVVAILTGLMLKYTLMSGEAIPFIMELPVYHVPHIKSLLLQTWQRLKGFVLRAGKVIVLASMLIGALNSFTLHGEAADSVNHSALAAVSKTLTPLLKPMGVHEDNWQATVGLISGAMAKEVVVGTLNTLYTAEQITRTPFEPDAFDLLDELSDAMTETWQGLQDVFSFSVLANPIEASKGDGEMSGGAMGMMSSKFGSATAAYSYLIFVLLYVPCISVLGAITRESSRGWMLLSALWGVNVAYSLATLFYQAATFMQHPLYSATAIAAVIVVNGLLIACLYRCRDRFQPGLSAAESSPCCQPAGGESCH
SIO_010081: SOPEG_RS01490
subclass of: SO_0000673
so part of: SOPEG_RS01490
location: 269782..272085
location: region:269782-272085:1
so has part: feature:269782-272085:1:exon

WP_025244053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:269782-272085:1:exon

SOPEG_RS01495
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01495
old locus tag: SOPEG_0293
so part of: sequence
location: 272095..272337
location: region:272095-272337:1
so has part: feature:272095-272337:1:exon
subclass of: SO_0000010

position:272095:1
position: 272095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272337:1
position: 272337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272095-272337:1:exon

SOPEG_RS01495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01495
old locus tag: SOPEG_0293
inference: COORDINATES: protein motif:HMM:NF020581.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FeoC-like transcriptional regulator
translation: MSGLMQLRDALELMGQADARALSLRLRLPQAMAAAMLERLEMMGQAERMTGDDTTAGACRACSRSARCRLPCYRLRSPAA
SIO_010081: SOPEG_RS01495
subclass of: SO_0000673
so part of: SOPEG_RS01495
location: 272095..272337
location: region:272095-272337:1
so has part: feature:272095-272337:1:exon

WP_025244054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:272095-272337:1:exon

SOPEG_RS01500
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01500
old locus tag: SOPEG_ps0294
pseudo: true
so part of: sequence
location: 272658..274323
location: region:272658-274323:1
so has part: feature:272658-274323:1:exon
subclass of: SO_0000010

position:272658:1
position: 272658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274323:1
position: 274323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272658-274323:1:exon

SOPEG_RS01500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01500
old locus tag: SOPEG_ps0294
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412130.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: alpha-amylase family glycosyl hydrolase
SIO_010081: SOPEG_RS01500
subclass of: SO_0000673
so part of: SOPEG_RS01500
location: 272658..274323
location: region:272658-274323:1
so has part: feature:272658-274323:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:272658-274323:1:exon

SOPEG_RS01505
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: bioH
locus tag: SOPEG_RS01505
old locus tag: SOPEG_ps0295
so part of: sequence
location: complement(274374..275084)
location: region:274374-275084:-1
so has part: feature:274374-275084:-1:exon
subclass of: SO_0000010

position:274374:-1
position: 274374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275084:-1
position: 275084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274374-275084:-1:exon

SOPEG_RS01505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: bioH
locus tag: SOPEG_RS01505
old locus tag: SOPEG_ps0295
EC number: 3.1.1.85
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412131.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0009102 - biotin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pimeloyl-ACP methyl ester esterase BioH
translation: MTSLFWQTTGTGDRDLVLLHGWGLNAGVWSCIIPRLAPHFRLHLVDLPGYGRSRGYGALTLEQMAEEMASRVPAGALWLGWSLGGLVAYRRPQAVAGLITVASSPRFCADGYWPGIRPEVLEGFAQELRSDFTRTVSRFLGLQTLGTESARQDARWLKSVVLAQPTPETEVLAGGLALLRLYGYLGGLVPRKVVPLVDEFSPASQSIVFAGAAHAPFISHPALFCQALCDFSQTVT
SIO_010081: SOPEG_RS01505
subclass of: SO_0000673
so part of: SOPEG_RS01505
location: complement(274374..275084)
location: region:274374-275084:-1
so has part: feature:274374-275084:-1:exon

WP_025244055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274374-275084:-1:exon

SOPEG_RS01510
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01510
old locus tag: SOPEG_ps0296
pseudo: true
so part of: sequence
location: 275151..275745
location: region:275151-275745:1
so has part: feature:275151-275745:1:exon
subclass of: SO_0000010

position:275151:1
position: 275151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275745:1
position: 275745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275151-275745:1:exon

SOPEG_RS01510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01510
old locus tag: SOPEG_ps0296
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016942933.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: SOPEG_RS01510
subclass of: SO_0000673
so part of: SOPEG_RS01510
location: 275151..275745
location: region:275151-275745:1
so has part: feature:275151-275745:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:275151-275745:1:exon

SOPEG_RS01515
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: nfuA
locus tag: SOPEG_RS01515
old locus tag: SOPEG_0297
so part of: sequence
location: 275805..276380
location: region:275805-276380:1
so has part: feature:275805-276380:1:exon
subclass of: SO_0000010

position:275805:1
position: 275805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276380:1
position: 276380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275805-276380:1:exon

SOPEG_RS01515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: nfuA
locus tag: SOPEG_RS01515
old locus tag: SOPEG_0297
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]; GO:0051604 - protein maturation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fe-S biogenesis protein NfuA
translation: MIRITDAAQEHFAKLLSNQEPGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTELKFDKISAYVDELSAPYLQDAKIDFVTDKLGSQLTLKAPNAKMRKVNDDAPLIERVEYLLQSQINPQLAGHGGQVTLMEITDDMLAILQFGGGCNGCSMVDYTLKEGIEKELLEKFPELKGVHDLTEHQRGEHSYY
SIO_010081: SOPEG_RS01515
subclass of: SO_0000673
so part of: SOPEG_RS01515
location: 275805..276380
location: region:275805-276380:1
so has part: feature:275805-276380:1:exon

WP_025244056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275805-276380:1:exon

SOPEG_RS01520
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: malQ
locus tag: SOPEG_RS01520
old locus tag: SOPEG_0298
so part of: sequence
location: complement(276539..278653)
location: region:276539-278653:-1
so has part: feature:276539-278653:-1:exon
subclass of: SO_0000010

position:276539:-1
position: 276539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278653:-1
position: 278653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276539-278653:-1:exon

SOPEG_RS01520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: malQ
locus tag: SOPEG_RS01520
old locus tag: SOPEG_0298
EC number: 2.4.1.25
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004393198.1
GO function: GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-alpha-glucanotransferase
translation: MPVTGAEALYRRARRAGIITEYVDAWQWPRSISPETPLPPVWVTGGHRERSLTLPAGIVVAWTLTEESGKQHHGQTRAAPAVGDEALEPATTGRAHLLTLPMGVSDGYHRLTLCVKDARWECKVIVAPERCYEPPAIRAGQRLWGNTVQLYTLRSARNWGIGDFGDLAQMIAGTARLGGAFVGVNPLHALYPALPDWASPYSPSSRRYLNIIYIDVGGLDDFLHSEQAQLWWREPETGRRLQALRANDQVDYAQVMTLKLTALRYAWAQFNRRGTDDPERQSLAEFIAAGGDSLYQQATFDALHLEQVAHGCLSLGWRDWPAEYQQANSAALARFRRQHQDEIAFFSYLQWLAARQLDGCYRLSQRLAMPVGIYRDLAVGVGDDGVENWADPALYCLSASVGAPPDRLGPQGQNWQLPPQDPNVLRKRGYQPFIDMLRANMCYCGMCYCGALRLDHVMALMRLWWVPRGYGPEHGAYARYPVADLLAVLALESQHKQCMVIGEDLGTVPEDIVEKLRAVGVYSYKVLFFERGQDQQFRAPAEYPPQAMTTLTTHDLATLSGFWQGADIDLAHQLDLYDDEQTWRRLLEERRLERQALLDALRRAGCLPAATPVRAEEVPMSPALNAAIHRFVAQSRSALLGLQPEDWLQMATPVNVPGTTDAYPNWRRKLTRDLETLFSDPDIIQLLTAVGRWRGRCGEGNAED
SIO_010081: SOPEG_RS01520
subclass of: SO_0000673
so part of: SOPEG_RS01520
location: complement(276539..278653)
location: region:276539-278653:-1
so has part: feature:276539-278653:-1:exon

WP_038468050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276539-278653:-1:exon

SOPEG_RS01525
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: malP
locus tag: SOPEG_RS01525
old locus tag: SOPEG_0299
so part of: sequence
location: complement(278701..281097)
location: region:278701-281097:-1
so has part: feature:278701-281097:-1:exon
subclass of: SO_0000010

position:278701:-1
position: 278701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281097:-1
position: 281097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278701-281097:-1:exon

SOPEG_RS01525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: malP
locus tag: SOPEG_RS01525
old locus tag: SOPEG_0299
EC number: 2.4.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012147311.1
GO function: GO:0008184 - glycogen phosphorylase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: maltodextrin phosphorylase
translation: MPRPKFDKAVFQAALDRQWQRYGLAGAQEMTAFQWWQAVSAAVNESIVPPSAQPGDNKKILRHVNYLSMEFLLGRLTGNNLINLGGYDTVKRVLEAYQVSLADILEYEVDPALGNGGLGRLVACYMDSMATVGQPAIGYGLNYQYGLFRQTFAEGQQWESPDDWHRETYPWFRHNAALNVEVGFGGKLVKDGQGGSRWEPAFSLIGEAWDLPVVGFGNGAVLPLRLWQATHPHPFNLALFNDGKFLKAERDGIDAAKLTKVLYPNDNHQEGKQLRLMQQYFQCACAVTDILRRHHLAGRSLETLPDYEVIQLNDTHPAIAIPEMLRVLLDQHRLTWDEVWLITSRTFAYTNHTLMPEALECWDEKLLQTLLPRHFAIIRHINDRLRVLVEQRWPGDNAVWRRLAVVQDKQVRMANLCVVCGFAVNGVAALHSELVKSDLFPEYYQLWPRKFHNVTNGITPRRWLKQCNPALAGLIDETIGKGWITRLERLTALASYADDAAFRACFQQIKYDNKRRLADKIHQMTGIVVDPQAMFDVQIKRLHEYKRQHLNLLHILSLYRRLRDNPDLDIVPRVFLFGAKAAPGYALAKNIIYAINQVAHKINNDRKINDRLQVIFMPDYRVTLAEWMIPAADLSEQISTAGKEASGTGNMKLALNGALTIGTLDGANVEIAEQVGEENIFIFGHTVSQVKALLADGYKPEQDKALKGLLADLASGSYSFKDKHAFELLLHSLQKGGDPYLVLADFAAYCRAQQQVDALYRRPDDWTRSAVLNTARVGFFSSDRAIRDYQQRIWQAKR
SIO_010081: SOPEG_RS01525
subclass of: SO_0000673
so part of: SOPEG_RS01525
location: complement(278701..281097)
location: region:278701-281097:-1
so has part: feature:278701-281097:-1:exon

WP_025244058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278701-281097:-1:exon

SOPEG_RS01530
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01530
old locus tag: SOPEG_0300
so part of: sequence
location: complement(281414..282172)
location: region:281414-282172:-1
so has part: feature:281414-282172:-1:exon
subclass of: SO_0000010

position:281414:-1
position: 281414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282172:-1
position: 282172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281414-282172:-1:exon

SOPEG_RS01530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01530
old locus tag: SOPEG_0300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009635717.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DeoR/GlpR family transcriptional regulator
translation: MKQTQRHDAIIELVRQQGYVSTEELVDHFAVSPQTIRRDLNDLAEQNKIQRHHGGAALPSSSVNAAYHDRKVMWSAEKARIAARVASQIPDGATLFIDIGTTPEAVAHALQGHKNLRVVTNNLNVAMLLTAKEDFRLILAGGEVRTRDGGIIGEATLDFISQFRLDYSILGISGIDLDGSLLEFDYHEVRTKRAIIDNSRCVMLVTDHSKFGRSAMVNLGKMDLVDYLFTDQLPPPGVMTLIEHSDVKLELC
SIO_010081: SOPEG_RS01530
subclass of: SO_0000673
so part of: SOPEG_RS01530
location: complement(281414..282172)
location: region:281414-282172:-1
so has part: feature:281414-282172:-1:exon

WP_025244059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:281414-282172:-1:exon

SOPEG_RS01535
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: glpG
locus tag: SOPEG_RS01535
old locus tag: SOPEG_0301
so part of: sequence
location: complement(282197..283045)
location: region:282197-283045:-1
so has part: feature:282197-283045:-1:exon
subclass of: SO_0000010

position:282197:-1
position: 282197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283045:-1
position: 283045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282197-283045:-1:exon

SOPEG_RS01535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: glpG
locus tag: SOPEG_RS01535
old locus tag: SOPEG_0301
EC number: 3.4.21.105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412134.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rhomboid family intramembrane serine protease GlpG
translation: MIRVAALSNARLVLAFIDYIKTQGVDMELRPQGSYIELWLAQDEKLEQVEAALEAFLLEPQHPRYQAASWRTGSLHYRGVTGSGLRAWLPALRQQAGPLTLGVTALCVLVFVLMTLLGDDRVMAVLAYPAGPAQYGQIWRWVSHAFLHFSLLHLVFNVVWWWYLAGLTERYRGRASLLILFLLSAIVSGVVQSHFSGSFFGGLSGVVYALMGYVWWHGEKNPGGSLSMPRGVIVFALLWLIAGYFNILGIAIANAAHVAGLVTGLLMAFWQTRRRRSHGAQR
SIO_010081: SOPEG_RS01535
subclass of: SO_0000673
so part of: SOPEG_RS01535
location: complement(282197..283045)
location: region:282197-283045:-1
so has part: feature:282197-283045:-1:exon

WP_025244060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:282197-283045:-1:exon

SOPEG_RS01540
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: glpE
locus tag: SOPEG_RS01540
old locus tag: SOPEG_0302
so part of: sequence
location: complement(283340..283663)
location: region:283340-283663:-1
so has part: feature:283340-283663:-1:exon
subclass of: SO_0000010

position:283340:-1
position: 283340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283663:-1
position: 283663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283340-283663:-1:exon

SOPEG_RS01540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: glpE
locus tag: SOPEG_RS01540
old locus tag: SOPEG_0302
EC number: 2.8.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412135.1
GO function: GO:0004792 - thiosulfate sulfurtransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiosulfate sulfurtransferase GlpE
translation: MDQFATISVELARERWQRGDAVLVDIRDPQSFAAGHPRGAFHLTNDTLPAFLAQQDAARPVLVMCYHGNSSKGAAQYLLSQGFEAAYSVDGGFDAWLKAFPQDTESL
SIO_010081: SOPEG_RS01540
subclass of: SO_0000673
so part of: SOPEG_RS01540
location: complement(283340..283663)
location: region:283340-283663:-1
so has part: feature:283340-283663:-1:exon

WP_025244061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:283340-283663:-1:exon

SOPEG_RS01545
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: glpD
locus tag: SOPEG_RS01545
old locus tag: SOPEG_ps0303
pseudo: true
so part of: sequence
location: 283966..285465
location: region:283966-285465:1
so has part: feature:283966-285465:1:exon
subclass of: SO_0000010

position:283966:1
position: 283966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285465:1
position: 285465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283966-285465:1:exon

SOPEG_RS01545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: glpD
locus tag: SOPEG_RS01545
old locus tag: SOPEG_ps0303
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229244.1
GO component: GO:0009331 - glycerol-3-phosphate dehydrogenase complex [Evidence IEA]
GO function: GO:0004368 - glycerol-3-phosphate dehydrogenase (quinone) activity [Evidence IEA]
GO process: GO:0006072 - glycerol-3-phosphate metabolic process [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glycerol-3-phosphate dehydrogenase
SIO_010081: SOPEG_RS01545
subclass of: SO_0000673
so part of: SOPEG_RS01545
location: 283966..285465
location: region:283966-285465:1
so has part: feature:283966-285465:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:283966-285465:1:exon

SOPEG_RS25840
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS25840
old locus tag: SOPEG_ps0304
pseudo: true
so part of: sequence
location: complement(285493..>287056)
location: region:285493-287056:-1
so has part: feature:285493-287056:-1:exon
subclass of: SO_0000010

position:285493:-1
position: 285493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287056:-1
position: 287056
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285493-287056:-1:exon

SOPEG_RS25840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS25840
old locus tag: SOPEG_ps0304
inference: COORDINATES: similar to AA sequence:RefSeq:NP_462435.1
GO function: GO:0008184 - glycogen phosphorylase activity [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glycogen/starch/alpha-glucan phosphorylase
SIO_010081: SOPEG_RS25840
subclass of: SO_0000673
so part of: SOPEG_RS25840
location: complement(285493..>287056)
location: region:285493-287056:-1
so has part: feature:285493-287056:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:285493-287056:-1:exon

SOPEG_RS01555
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01555
old locus tag: SOPEG_0305
so part of: sequence
location: 287131..288054
location: region:287131-288054:1
so has part: feature:287131-288054:1:exon
subclass of: SO_0000010

position:287131:1
position: 287131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288054:1
position: 288054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287131-288054:1:exon

SOPEG_RS01555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01555
old locus tag: SOPEG_0305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDMTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDAIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKIFGEGEWKVRQHGAERRRVWRKLHLAINSATHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKTLLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS01555
subclass of: SO_0000673
so part of: SOPEG_RS01555
location: 287131..288054
location: region:287131-288054:1
so has part: feature:287131-288054:1:exon

WP_025244062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287131-288054:1:exon

SOPEG_RS23795
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS23795
pseudo: true
so part of: sequence
location: complement(<288109..288897)
location: region:288109-288897:-1
so has part: feature:288109-288897:-1:exon
subclass of: SO_0000010

position:288109:-1
position: 288109
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:288897:-1
position: 288897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288109-288897:-1:exon

SOPEG_RS23795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS23795
inference: COORDINATES: similar to AA sequence:RefSeq:NP_462435.1
GO function: GO:0008184 - glycogen phosphorylase activity [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glycogen/starch/alpha-glucan phosphorylase
SIO_010081: SOPEG_RS23795
subclass of: SO_0000673
so part of: SOPEG_RS23795
location: complement(<288109..288897)
location: region:288109-288897:-1
so has part: feature:288109-288897:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:288109-288897:-1:exon

SOPEG_RS01565
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: glgA
locus tag: SOPEG_RS01565
old locus tag: SOPEG_ps0306
pseudo: true
so part of: sequence
location: complement(288922..290351)
location: region:288922-290351:-1
so has part: feature:288922-290351:-1:exon
subclass of: SO_0000010

position:288922:-1
position: 288922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290351:-1
position: 290351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288922-290351:-1:exon

SOPEG_RS01565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: glgA
locus tag: SOPEG_RS01565
old locus tag: SOPEG_ps0306
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312301.1
GO function: GO:0004373 - glycogen (starch) synthase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glycogen synthase GlgA
SIO_010081: SOPEG_RS01565
subclass of: SO_0000673
so part of: SOPEG_RS01565
location: complement(288922..290351)
location: region:288922-290351:-1
so has part: feature:288922-290351:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:288922-290351:-1:exon

SOPEG_RS01570
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: glgC
locus tag: SOPEG_RS01570
old locus tag: SOPEG_ps0307
pseudo: true
so part of: sequence
location: complement(290404..291682)
location: region:290404-291682:-1
so has part: feature:290404-291682:-1:exon
subclass of: SO_0000010

position:290404:-1
position: 290404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291682:-1
position: 291682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290404-291682:-1:exon

SOPEG_RS01570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: glgC
locus tag: SOPEG_RS01570
old locus tag: SOPEG_ps0307
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004714739.1
GO function: GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO process: GO:0005978 - glycogen biosynthetic process [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glucose-1-phosphate adenylyltransferase
SIO_010081: SOPEG_RS01570
subclass of: SO_0000673
so part of: SOPEG_RS01570
location: complement(290404..291682)
location: region:290404-291682:-1
so has part: feature:290404-291682:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:290404-291682:-1:exon

SOPEG_RS01575
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: glgX
locus tag: SOPEG_RS01575
old locus tag: SOPEG_ps0308
pseudo: true
so part of: sequence
location: complement(291694..293673)
location: region:291694-293673:-1
so has part: feature:291694-293673:-1:exon
subclass of: SO_0000010

position:291694:-1
position: 291694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293673:-1
position: 293673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291694-293673:-1:exon

SOPEG_RS01575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: glgX
locus tag: SOPEG_RS01575
old locus tag: SOPEG_ps0308
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005157476.1
GO function: GO:0004133 - glycogen debranching enzyme activity [Evidence IEA]
GO process: GO:0005980 - glycogen catabolic process [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glycogen debranching protein GlgX
SIO_010081: SOPEG_RS01575
subclass of: SO_0000673
so part of: SOPEG_RS01575
location: complement(291694..293673)
location: region:291694-293673:-1
so has part: feature:291694-293673:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291694-293673:-1:exon

SOPEG_RS01580
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: glgB
locus tag: SOPEG_RS01580
old locus tag: SOPEG_ps0309
pseudo: true
so part of: sequence
location: complement(293670..>295688)
location: region:293670-295688:-1
so has part: feature:293670-295688:-1:exon
subclass of: SO_0000010

position:293670:-1
position: 293670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295688:-1
position: 295688
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293670-295688:-1:exon

SOPEG_RS01580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: glgB
locus tag: SOPEG_RS01580
old locus tag: SOPEG_ps0309
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012147322.1
GO function: GO:0003844 - 1,4-alpha-glucan branching enzyme activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0005978 - glycogen biosynthetic process [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 1,4-alpha-glucan branching protein GlgB
SIO_010081: SOPEG_RS01580
subclass of: SO_0000673
so part of: SOPEG_RS01580
location: complement(293670..>295688)
location: region:293670-295688:-1
so has part: feature:293670-295688:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:293670-295688:-1:exon

SOPEG_RS01585
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01585
old locus tag: SOPEG_0310
so part of: sequence
location: complement(295744..296667)
location: region:295744-296667:-1
so has part: feature:295744-296667:-1:exon
subclass of: SO_0000010

position:295744:-1
position: 295744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296667:-1
position: 296667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295744-296667:-1:exon

SOPEG_RS01585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01585
old locus tag: SOPEG_0310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDLTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDSIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKIFGEGEWKVRQHGAERRRVWRKLHLAVDSATHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKILLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS01585
subclass of: SO_0000673
so part of: SOPEG_RS01585
location: complement(295744..296667)
location: region:295744-296667:-1
so has part: feature:295744-296667:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:295744-296667:-1:exon

SOPEG_RS28145
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS28145
pseudo: true
so part of: sequence
location: complement(<296744..296893)
location: region:296744-296893:-1
so has part: feature:296744-296893:-1:exon
subclass of: SO_0000010

position:296744:-1
position: 296744
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:296893:-1
position: 296893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296744-296893:-1:exon

SOPEG_RS28145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS28145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004150069.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: SOPEG_RS28145
subclass of: SO_0000673
so part of: SOPEG_RS28145
location: complement(<296744..296893)
location: region:296744-296893:-1
so has part: feature:296744-296893:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296744-296893:-1:exon

SOPEG_RS01590
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: asd
locus tag: SOPEG_RS01590
old locus tag: SOPEG_0311
so part of: sequence
location: complement(297612..298718)
location: region:297612-298718:-1
so has part: feature:297612-298718:-1:exon
subclass of: SO_0000010

position:297612:-1
position: 297612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298718:-1
position: 298718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297612-298718:-1:exon

SOPEG_RS01590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: asd
locus tag: SOPEG_RS01590
old locus tag: SOPEG_0311
EC number: 1.2.1.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412137.1
GO function: GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate-semialdehyde dehydrogenase
translation: MKNVGFIGWRGMVGSVLMQRMTEERDFDAIRPVFFSTSQHGQPAPAVNGQQGVLQDARDLAALSALDIIVTCQGGDYTNEIYPRLREIGWQGYWIDAASSLRMRDDAIIILDPVNQAVIQQGLDRGIKTFVGGNCTVSLMLMSLGGLFAQDLVEWASVATYQAASGGGARHMRELLVQMGQLHDAVAKPLQNPASAIQDIERRVTDLTRSGTLPTDNFGVPLAGSLIPWIDKQLENGQSREEWKGQAETNKILNTRQAISVDGLCVRIGALRCHSQAFTLKLKKDVPLAEIERLLATHNDWVTVVPNDRELSMRELTPAAVTGTLKTPVGRLRKLNMGPEYLSAFTVGDQLLWGAAEPLRRMLRQLAH
SIO_010081: SOPEG_RS01590
subclass of: SO_0000673
so part of: SOPEG_RS01590
location: complement(297612..298718)
location: region:297612-298718:-1
so has part: feature:297612-298718:-1:exon

WP_025244064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:297612-298718:-1:exon

SOPEG_RS01595
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01595
old locus tag: SOPEG_0312
so part of: sequence
location: 298926..299519
location: region:298926-299519:1
so has part: feature:298926-299519:1:exon
subclass of: SO_0000010

position:298926:1
position: 298926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299519:1
position: 299519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298926-299519:1:exon

SOPEG_RS01595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01595
old locus tag: SOPEG_0312
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004951434.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YhgN family NAAT transporter
translation: MSEMISATVLLFLIMDPLGNLPIFMSVLKHLEPKRRRVIVIREMLIALLLMLVFLFAGEHILSFLSLRTETVSISGGIILFLIAIKMIFPSQEGNSTGLPAGEEPFLVPLAIPLVAGPSILAALMLLSHQYPLQINHLVLALLIAWGLSVVILMLSNVFLRLLGSKGVSALERLMGLLLVMISTQMFLDGVRAYLRT
SIO_010081: SOPEG_RS01595
subclass of: SO_0000673
so part of: SOPEG_RS01595
location: 298926..299519
location: region:298926-299519:1
so has part: feature:298926-299519:1:exon

WP_025244065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298926-299519:1:exon

SOPEG_RS01600
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: gntT
locus tag: SOPEG_RS01600
old locus tag: SOPEG_0313
so part of: sequence
location: complement(299661..300977)
location: region:299661-300977:-1
so has part: feature:299661-300977:-1:exon
subclass of: SO_0000010

position:299661:-1
position: 299661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300977:-1
position: 300977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299661-300977:-1:exon

SOPEG_RS01600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: gntT
locus tag: SOPEG_RS01600
old locus tag: SOPEG_0313
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229237.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: gluconate transporter
translation: MPLFIVAIGVALLLLLMIRFKLNGFIALILVALAVGVLQGMPVNKVIGSIKNGVGGTLGSLALIMGFGAMLGKLLADCGGAQRIATTLIDKFGQCYIQWAVVLTGFTVGFALFYEIGFVLMLPLVFSIAANARISLLCVGVPMAAALSVAHGFLPPHPGPTAIAAIFHADMGKTLLYGTILAIPTVILAGPVYSQFLRHIDKPVPEVLYNPKKFTEQEMPSFAVSVWTSLVPVVLMALRAITEMLLPAGNPILAYTEFFDDPIMATLIAVLIAIFTFGLNRGRSMDDVMGTITDSIKIIAMMLLIIGGGGAFKQVLVDSGVDKYIASLMEGSTISPLLLAWTIAATLRIALGSATVAAITAGGIAAPLIATTGVSPELMVIAVGSGSVIFSHVNDPGFWLFKEYFNLTIGETIRSWSVLETIIAVSGLVGCLLLNMVI
SIO_010081: SOPEG_RS01600
subclass of: SO_0000673
so part of: SOPEG_RS01600
location: complement(299661..300977)
location: region:299661-300977:-1
so has part: feature:299661-300977:-1:exon

WP_025244066.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299661-300977:-1:exon

SOPEG_RS01605
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: gntR
locus tag: SOPEG_RS01605
old locus tag: SOPEG_0314
so part of: sequence
location: complement(301275..302270)
location: region:301275-302270:-1
so has part: feature:301275-302270:-1:exon
subclass of: SO_0000010

position:301275:-1
position: 301275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302270:-1
position: 302270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301275-302270:-1:exon

SOPEG_RS01605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: gntR
locus tag: SOPEG_RS01605
old locus tag: SOPEG_0314
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002209514.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: gluconate operon transcriptional repressor GntR
translation: MKKKRPGLQDVADQVGVTKMTVSRYLRDPDRVSQALQAKIAAALDRLGYIPNRAPDILFNATSRAIGVLLSSLTNQVFAEVLRGIEQVTDANGYQTMLAHYGYSPELEELRLTSLLSYNIDGLILFERHHTPRTLKMIEVAGIPVVEIMDYVSPCLDMAVGFDNFEAARQMTRLIIERGHRQVVYFGARQDERTIIKQQGYEQGMRDAGLPAYSVMIADSSNYTAGVELLRQAQREYPGINGIISTNDDLAIGALFECQRQGIAVPDKMAIAGFHGHDFARVVHPRLASVLTPREEMGRLSADCLLARLRGEPRGDGQIDVGFTLLAGESI
SIO_010081: SOPEG_RS01605
subclass of: SO_0000673
so part of: SOPEG_RS01605
location: complement(301275..302270)
location: region:301275-302270:-1
so has part: feature:301275-302270:-1:exon

WP_025244067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:301275-302270:-1:exon

SOPEG_RS01610
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01610
old locus tag: SOPEG_ps0315
pseudo: true
so part of: sequence
location: complement(302346..303025)
location: region:302346-303025:-1
so has part: feature:302346-303025:-1:exon
subclass of: SO_0000010

position:302346:-1
position: 302346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303025:-1
position: 303025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302346-303025:-1:exon

SOPEG_RS01610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01610
old locus tag: SOPEG_ps0315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002209515.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: pirin family protein
SIO_010081: SOPEG_RS01610
subclass of: SO_0000673
so part of: SOPEG_RS01610
location: complement(302346..303025)
location: region:302346-303025:-1
so has part: feature:302346-303025:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:302346-303025:-1:exon

SOPEG_RS01615
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: yigL
locus tag: SOPEG_RS01615
old locus tag: SOPEG_ps0316
pseudo: true
so part of: sequence
location: complement(303285..304083)
location: region:303285-304083:-1
so has part: feature:303285-304083:-1:exon
subclass of: SO_0000010

position:303285:-1
position: 303285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304083:-1
position: 304083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303285-304083:-1:exon

SOPEG_RS01615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: yigL
locus tag: SOPEG_RS01615
old locus tag: SOPEG_ps0316
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014888708.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: sugar/pyridoxal phosphate phosphatase YigL
SIO_010081: SOPEG_RS01615
subclass of: SO_0000673
so part of: SOPEG_RS01615
location: complement(303285..304083)
location: region:303285-304083:-1
so has part: feature:303285-304083:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:303285-304083:-1:exon

SOPEG_RS01620
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: pldB
locus tag: SOPEG_RS01620
old locus tag: SOPEG_ps0317
pseudo: true
so part of: sequence
location: complement(304130..305076)
location: region:304130-305076:-1
so has part: feature:304130-305076:-1:exon
subclass of: SO_0000010

position:304130:-1
position: 304130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305076:-1
position: 305076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304130-305076:-1:exon

SOPEG_RS01620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: pldB
locus tag: SOPEG_RS01620
old locus tag: SOPEG_ps0317
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007704530.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: lysophospholipase L2
SIO_010081: SOPEG_RS01620
subclass of: SO_0000673
so part of: SOPEG_RS01620
location: complement(304130..305076)
location: region:304130-305076:-1
so has part: feature:304130-305076:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:304130-305076:-1:exon

SOPEG_RS01625
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rhtC
locus tag: SOPEG_RS01625
old locus tag: SOPEG_ps0318
pseudo: true
so part of: sequence
location: complement(305091..305653)
location: region:305091-305653:-1
so has part: feature:305091-305653:-1:exon
subclass of: SO_0000010

position:305091:-1
position: 305091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305653:-1
position: 305653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305091-305653:-1:exon

SOPEG_RS01625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rhtC
locus tag: SOPEG_RS01625
old locus tag: SOPEG_ps0318
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004714274.1
GO process: GO:0006865 - amino acid transport [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: threonine export protein RhtC
SIO_010081: SOPEG_RS01625
subclass of: SO_0000673
so part of: SOPEG_RS01625
location: complement(305091..305653)
location: region:305091-305653:-1
so has part: feature:305091-305653:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:305091-305653:-1:exon

SOPEG_RS01630
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: recQ
locus tag: SOPEG_RS01630
old locus tag: SOPEG_ps0319
pseudo: true
so part of: sequence
location: complement(305804..307641)
location: region:305804-307641:-1
so has part: feature:305804-307641:-1:exon
subclass of: SO_0000010

position:305804:-1
position: 305804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307641:-1
position: 307641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305804-307641:-1:exon

SOPEG_RS01630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: recQ
locus tag: SOPEG_RS01630
old locus tag: SOPEG_ps0319
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019080187.1
GO function: GO:0003678 - DNA helicase activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-dependent DNA helicase RecQ
SIO_010081: SOPEG_RS01630
subclass of: SO_0000673
so part of: SOPEG_RS01630
location: complement(305804..307641)
location: region:305804-307641:-1
so has part: feature:305804-307641:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:305804-307641:-1:exon

SOPEG_RS01635
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: pldA
locus tag: SOPEG_RS01635
old locus tag: SOPEG_0320
so part of: sequence
location: complement(307707..308501)
location: region:307707-308501:-1
so has part: feature:307707-308501:-1:exon
subclass of: SO_0000010

position:307707:-1
position: 307707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308501:-1
position: 308501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307707-308501:-1:exon

SOPEG_RS01635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: pldA
locus tag: SOPEG_RS01635
old locus tag: SOPEG_0320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412145.1
GO function: GO:0004620 - phospholipase activity [Evidence IEA]
GO process: GO:0006629 - lipid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospholipase A
translation: MRRLWGATALLLGSTSFVYAQEATVEKIHDTPAVKGSIIANLLQEHDNSFTLYPYESNYLLYTYTSNINKQAISSYDWANNAKKDEVAFQLSLGFPLWRGIAGDNSLLGASYTQRSWWQLSNSEESSPFRETNYEPQLFIGWATDYDFAGWTLRDVEVGLNHQSNGRSDPTSRSWNRAYTRLMAQNGNWQVEVKPWLWLDDSSDNPDIIKYMGHYRLKIGYAWGESIFSAEGRYNWNSGYGESLIDYNHRQIRIGMGFMLNDMM
SIO_010081: SOPEG_RS01635
subclass of: SO_0000673
so part of: SOPEG_RS01635
location: complement(307707..308501)
location: region:307707-308501:-1
so has part: feature:307707-308501:-1:exon

WP_025244068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307707-308501:-1:exon

SOPEG_RS01640
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01640
old locus tag: SOPEG_0321
so part of: sequence
location: 308707..309171
location: region:308707-309171:1
so has part: feature:308707-309171:1:exon
subclass of: SO_0000010

position:308707:1
position: 308707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309171:1
position: 309171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308707-309171:1:exon

SOPEG_RS01640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01640
old locus tag: SOPEG_0321
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002211482.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioesterase family protein
translation: MSLTPLTADHARRLIGDIFVYHMPFNHELGLKLTQHENDAAQLEFARDEKLVGNTLQRILHGGVIASELDVAAGITCVTGALLRQPALSEQDLRHRLARMGTIDMRVDYLLPGHGEHFTVTSHLLRGGNKISVARAELHNNRGHHLATATYLVG
SIO_010081: SOPEG_RS01640
subclass of: SO_0000673
so part of: SOPEG_RS01640
location: 308707..309171
location: region:308707-309171:1
so has part: feature:308707-309171:1:exon

WP_025244069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308707-309171:1:exon

SOPEG_RS01645
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rarD
locus tag: SOPEG_RS01645
old locus tag: SOPEG_0322
so part of: sequence
location: 309175..310071
location: region:309175-310071:1
so has part: feature:309175-310071:1:exon
subclass of: SO_0000010

position:309175:1
position: 309175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310071:1
position: 310071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309175-310071:1:exon

SOPEG_RS01645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rarD
locus tag: SOPEG_RS01645
old locus tag: SOPEG_0322
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412147.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0005215 - transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EamA family transporter RarD
translation: MNENTARQGVLCALGAYFIWGLAPAYFKLIDYVPANEILAHRILWSAVFMLVLLTLGRRWPQVRRSFRRGRLLLTLALTSVLIGSNWLLFIWAVNHHHMLEASLGYFINPLVNVLLGMLFLGERFRRWQWLAVVLASAGALVQLWMFGSLPLIALGLALTFALYGLLQKKIGIDAQTGMLIETLWLLPAAAVYLFFIADTPTSHLSANGWHLNTLLASAGVLTTVPLLLFTAVANRLRLSTVGFFQYLGPTLMFLLAVGFYGEALSADKLYTFAFIWLALGVFIADALLAQRRRLQTA
SIO_010081: SOPEG_RS01645
subclass of: SO_0000673
so part of: SOPEG_RS01645
location: 309175..310071
location: region:309175-310071:1
so has part: feature:309175-310071:1:exon

WP_025244070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:309175-310071:1:exon

SOPEG_RS01650
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01650
old locus tag: SOPEG_ps0323
pseudo: true
so part of: sequence
location: complement(310079..310976)
location: region:310079-310976:-1
so has part: feature:310079-310976:-1:exon
subclass of: SO_0000010

position:310079:-1
position: 310079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310976:-1
position: 310976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310079-310976:-1:exon

SOPEG_RS01650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01650
old locus tag: SOPEG_ps0323
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004861179.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: AbrB family transcriptional regulator
SIO_010081: SOPEG_RS01650
subclass of: SO_0000673
so part of: SOPEG_RS01650
location: complement(310079..310976)
location: region:310079-310976:-1
so has part: feature:310079-310976:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:310079-310976:-1:exon

SOPEG_RS01655
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: corA
locus tag: SOPEG_RS01655
old locus tag: SOPEG_0324
so part of: sequence
location: complement(311188..312138)
location: region:311188-312138:-1
so has part: feature:311188-312138:-1:exon
subclass of: SO_0000010

position:311188:-1
position: 311188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312138:-1
position: 312138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311188-312138:-1:exon

SOPEG_RS01655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: corA
locus tag: SOPEG_RS01655
old locus tag: SOPEG_0324
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1
GO function: GO:0015087 - cobalt ion transmembrane transporter activity [Evidence IEA]; GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO process: GO:0006824 - cobalt ion transport [Evidence IEA]; GO:0015693 - magnesium ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: magnesium/cobalt transporter CorA
translation: MLNAFQLENHRLSRLDADELGTLPEAVWVDLIEPGDDERERVQHELGQSLATRLELEDIEASARFFEDEDGLHIHSFFFYADAEDHAGNATVAFTIRDGRLYTLRERELPAFRLYRMRTRSQTLIDGNAYELLLDLFETKIEQLADEIENIYSDLEALSLVIMDGHQGDEYDNALSTLAELEDVGWKVRLCLMDTQRALNFLVRKARLPSGQLEQAREILRDIESLLPHNESLFQKVNFLMQAAMGFINIEQNRIIKIFSVVSVVFLPPTLVASSYGMNFEFMPELKWSFGYPGAIMLMILAGLAPYLYFKRKNWL
SIO_010081: SOPEG_RS01655
subclass of: SO_0000673
so part of: SOPEG_RS01655
location: complement(311188..312138)
location: region:311188-312138:-1
so has part: feature:311188-312138:-1:exon

WP_025244071.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:311188-312138:-1:exon

SOPEG_RS01660
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
alternative label: mutU
alternative label: recL
gene: uvrD
locus tag: SOPEG_RS01660
old locus tag: SOPEG_0325
gene synonym: mutU; recL
so part of: sequence
location: complement(312476..314638)
location: region:312476-314638:-1
so has part: feature:312476-314638:-1:exon
subclass of: SO_0000010

position:312476:-1
position: 312476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314638:-1
position: 314638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312476-314638:-1:exon

SOPEG_RS01660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
alternative label: mutU
alternative label: recL
gene: uvrD
locus tag: SOPEG_RS01660
old locus tag: SOPEG_0325
gene synonym: mutU; recL
EC number: 3.6.4.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008455510.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
GO process: GO:0006268 - DNA unwinding involved in DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA helicase II
translation: MDVSDLLNSLNDKQREAVAAPRGNLLVLAGAGSGKTWVLVHRIAWLLSVKNCSPYSVMAVTFTNKAAAEMRHRIEHLVGTSQGGMWIGTFHGLAHRLLRAHHQDANLPQDFQILDSEDQLRLLKRLIRAMNLDEKQWPPRQAMWYIGGKKDEGLRPQHVESYGNPVEATWQRIYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILRHYRERFTNILVDEFQDTNQIQYAWIRMLAGNDGNVMIVGDDDQSIYGWRGAQVENIQRFLDDFPGAQTIRLEQNYRSTSNILQAANALIAHNGGRLGKNLWTEGAEGEPITLYCAFNELDEARFVVNRIKVSQEQGGALKDCAILYRSNAQSRVLEEALLQTGLPYRIYGGMRFFERQEIKDALAYLRLIANRNDDAAYERVVNTPTRGLGDRTLDVVRQTARDRQLTLWQSSRALLAERVLAGRAAAALQRFLELVDALAQETAELPLHVQTDRVIKNSGLWSMYEQEKGEKGQARIENLEELVTATRQFSYNDEDQDLLPLQAFLSHAALEAGEGQADAYQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMDKLTITYAETRRLYGKEAYHRPSRFVGELPPSCVEEVRLRASVTRPASQQRLGAPLSENDSGFTLGQRVRHPKFGEGTVVNLEGSGEHSRLQIAFQGQGIKWLAAAYARLETV
SIO_010081: SOPEG_RS01660
subclass of: SO_0000673
so part of: SOPEG_RS01660
location: complement(312476..314638)
location: region:312476-314638:-1
so has part: feature:312476-314638:-1:exon

WP_025244072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312476-314638:-1:exon

SOPEG_RS01665
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01665
old locus tag: SOPEG_0326
so part of: sequence
location: 314769..315989
location: region:314769-315989:1
so has part: feature:314769-315989:1:exon
subclass of: SO_0000010

position:314769:1
position: 314769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315989:1
position: 315989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314769-315989:1:exon

SOPEG_RS01665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01665
old locus tag: SOPEG_0326
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025244073.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ISL3-like element ISSoEn4 family transposase
translation: MDEKSLYAHILNLSAPWQVQSLSLNEKSGSVTVIVGIAEHTQLACPTCGKSCSIHDHRRRKWRHLDTCQFTTLVEADVPRVDCPEHGCQTLPVPWAGSGSRYTLLFEAFVLSWLKVSTVDAVRKQLKLSWNAVEGIMMRAVKRGLARIKQPLSARYLCVDEVGFKKGHQYVTVISDRQGRALQLTDDRGVESLASYLRSLRDHQLDEIKTLSMDMNMAYISAARIHLPNAVDKIAFDHFHVAKMLCAVVDKTRQGEMKQIPSSDRKDAHRSRYLWFYSKQNRLGCWAERLEVARLMLPQTSQCWVMKELARDLWHRRYDNHSRKLWQEWMAMAKDTGIPLMASIARMVAKRLYGILNAMKNRVSNGNAESLNSKIRLFRIKSQGFRNKERFKLGVMFHYGKLNMNF
SIO_010081: SOPEG_RS01665
subclass of: SO_0000673
so part of: SOPEG_RS01665
location: 314769..315989
location: region:314769-315989:1
so has part: feature:314769-315989:1:exon

WP_025244073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314769-315989:1:exon

SOPEG_RS26955
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS26955
so part of: sequence
location: complement(315994..316290)
location: region:315994-316290:-1
so has part: feature:315994-316290:-1:exon
subclass of: SO_0000010

position:315994:-1
position: 315994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316290:-1
position: 316290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315994-316290:-1:exon

SOPEG_RS26955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS26955
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSCLKKYAYTPFILLLHGVAASTSPNMMYDTDKKDYSLSPEVTPKLSWEKSESQVDKTQYCLTPSDPGCSNMWQKEKEKENDERIQHHQQKKFYNSLK
SIO_010081: SOPEG_RS26955
subclass of: SO_0000673
so part of: SOPEG_RS26955
location: complement(315994..316290)
location: region:315994-316290:-1
so has part: feature:315994-316290:-1:exon

WP_148296978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:315994-316290:-1:exon

SOPEG_RS01670
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: yigB
locus tag: SOPEG_RS01670
old locus tag: SOPEG_0327
so part of: sequence
location: complement(316439..317152)
location: region:316439-317152:-1
so has part: feature:316439-317152:-1:exon
subclass of: SO_0000010

position:316439:-1
position: 316439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317152:-1
position: 317152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316439-317152:-1:exon

SOPEG_RS01670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: yigB
locus tag: SOPEG_RS01670
old locus tag: SOPEG_0327
EC number: 3.1.3.104
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011815342.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB
translation: MHFYRPLQELRALTFDLDDTLYDNRPVIARTEYESVQFLQQYHPALRCLGQDDYQRLRRELCQREPEIYHDVSHWRWRSIELAMRNAGLSEREARVGADAAMEVVLRWRSQIDVPAETHSTLAALSARWPLVAITNGNASPEACGLAGYFRHILRAGPDGRAKPRQDMYALAAARLNVPPCNILHVGDDLEADVTGAIRYGMQACWINGRGGNFAAADARLLPHLEISRLASLAALL
SIO_010081: SOPEG_RS01670
subclass of: SO_0000673
so part of: SOPEG_RS01670
location: complement(316439..317152)
location: region:316439-317152:-1
so has part: feature:316439-317152:-1:exon

WP_025244074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:316439-317152:-1:exon

SOPEG_RS01675
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: xerC
locus tag: SOPEG_RS01675
old locus tag: SOPEG_0328
so part of: sequence
location: complement(317152..318063)
location: region:317152-318063:-1
so has part: feature:317152-318063:-1:exon
subclass of: SO_0000010

position:318063:-1
position: 318063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317152-318063:-1:exon

SOPEG_RS01675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: xerC
locus tag: SOPEG_RS01675
old locus tag: SOPEG_0328
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011815341.1
GO function: GO:0009009 - site-specific recombinase activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine recombinase XerC
translation: MTDTRSPLWPQVDAFLQYLRVERQLSAKTRESYLRQLATLIAMASEMGLTEWRQLEVSQVRALATRSKRQGLQPASLALRLSALRSFLDWLVSIGQLGANPARGVPAPRHGRHLPKNMDVDEVDHLLDIDTHDPLALRDRAMLEVMYGAGLRLAELVGLNCADVDLSGGEVRVVGKGNKERKLPIGATAVAWLRRWLALRDQYTPQNDAVFIAQRGGRISARNVQKRFAEWGVKQGVNSHIHPHKLRHSFATHMLESSGNLRAVQELLGHANLSTTQIYTHLDFQHLASVYDAAHPRAKRGKI
SIO_010081: SOPEG_RS01675
subclass of: SO_0000673
so part of: SOPEG_RS01675
location: complement(317152..318063)
location: region:317152-318063:-1
so has part: feature:317152-318063:-1:exon

WP_025244075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:317152-318063:-1:exon

SOPEG_RS01680
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01680
old locus tag: SOPEG_0329
so part of: sequence
location: complement(318060..318764)
location: region:318060-318764:-1
so has part: feature:318060-318764:-1:exon
subclass of: SO_0000010

position:318060:-1
position: 318060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318764:-1
position: 318764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318060-318764:-1:exon

SOPEG_RS01680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01680
old locus tag: SOPEG_0329
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015344141.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF484 domain-containing protein
translation: MKQVGEQADSAQTLDDEQVVRYLLTHPDFFIRNVRSVEQMVVPHPVHGCVSLLEWQLGRQRAHIQQLEDDITRLMEHASTNEPLFNRLLRLQSDLAAADSLQELLNRLQRWARGLGLAGAHVRLFSDQWQLGAPSGFTYLALARSSFEPLRIQRLGQGNHYLGKLNGPELLLLLPQVRQVGSVAMSLLGDDGSLGVLMFTSRDSQHFQDGMGTVLLQQLATLLPGLLERWVSRA
SIO_010081: SOPEG_RS01680
subclass of: SO_0000673
so part of: SOPEG_RS01680
location: complement(318060..318764)
location: region:318060-318764:-1
so has part: feature:318060-318764:-1:exon

WP_025244076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318060-318764:-1:exon

SOPEG_RS01685
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: dapF
locus tag: SOPEG_RS01685
old locus tag: SOPEG_0330
so part of: sequence
location: complement(318761..319585)
location: region:318761-319585:-1
so has part: feature:318761-319585:-1:exon
subclass of: SO_0000010

position:318761:-1
position: 318761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319585:-1
position: 319585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318761-319585:-1:exon

SOPEG_RS01685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: dapF
locus tag: SOPEG_RS01685
old locus tag: SOPEG_0330
EC number: 5.1.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1
GO function: GO:0008837 - diaminopimelate epimerase activity [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diaminopimelate epimerase
translation: MQFSKMHGLGNDFMVVDAVTQNVYFSPEMIRRLSDRHCGVGFDQLLVVESPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRMKNLTNKRDILVSTQMGRMMLTVTEDDMVRVNMGEPNFDPQQVPFRAAKAEKTYIMRAAEQTVLCGVVSMGNPHCVIAVDSVGSAPVLTLGPVLESHERFPERANIGFMQVLNRGHIRLRVYERGAGETQACGSGACAAVAVGISQGQLVEQVQVDLPGGRLDISWRGPGHPLYMTGPATHIYDGFIHL
SIO_010081: SOPEG_RS01685
subclass of: SO_0000673
so part of: SOPEG_RS01685
location: complement(318761..319585)
location: region:318761-319585:-1
so has part: feature:318761-319585:-1:exon

WP_025244077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318761-319585:-1:exon

SOPEG_RS01690
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01690
old locus tag: SOPEG_0331
so part of: sequence
location: complement(319655..319876)
location: region:319655-319876:-1
so has part: feature:319655-319876:-1:exon
subclass of: SO_0000010

position:319655:-1
position: 319655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319876:-1
position: 319876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319655-319876:-1:exon

SOPEG_RS01690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01690
old locus tag: SOPEG_0331
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015344139.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipoprotein
translation: MKSELRRAALVLMLLGLYGCGLKGPLYFPPADKADKSEQKHQLTTTPSSTQSPVQTASPGDDGSSAAVGTEQP
SIO_010081: SOPEG_RS01690
subclass of: SO_0000673
so part of: SOPEG_RS01690
location: complement(319655..319876)
location: region:319655-319876:-1
so has part: feature:319655-319876:-1:exon

WP_025244078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:319655-319876:-1:exon

SOPEG_RS01695
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01695
old locus tag: SOPEG_0332
so part of: sequence
location: complement(320017..322566)
location: region:320017-322566:-1
so has part: feature:320017-322566:-1:exon
subclass of: SO_0000010

position:320017:-1
position: 320017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322566:-1
position: 322566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320017-322566:-1:exon

SOPEG_RS01695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01695
old locus tag: SOPEG_0332
EC number: 4.6.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412154.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I adenylate cyclase
translation: MYFYIETLKQRLDAINQLRVDRALAAMGPGFQHVYSLLPTLLHFHHPMLPGYLDGNVPHGICFYSPNETQRAWLDDISRQAGAAVAETDSGEQPITGVYSMGSTSTIGQNTNSDFDIWVCHQSWLDNEERAQLQRKCHLLEQWATRQGVDVNFFLIDENRFRHNESGSLGDEDCGSTQHILLLDEFYRTAVRMGGKRILWNMVPGDEEAHYDEYVLSLYARGALTPNEWLDLGGLGTLSAEEYFGASLWQLYKSIDSPYKAVLKTLLLEAYSWEYPHTELLAMKIKQRLHDGEIVSFGLDPYCMMLERVTYYLTQINDMTRLDLVRRCFYLKVCEKLSQDPTGTPWRRGILTQLVTNWGWDEARLKMLDDRANWKIGQVREAHNELLDAMMQSYRNLIRFARRNNLSVSASPQDIGVLTRKLYAAFEALPGKVTLLNPQISPDLSEPHLTFIHVPQGRANRTGWYLYNQSPSMDSIISHQPLEYNRYLNKLVAWAWFNGLLTRSTQVHIKGSDTCDSAKLNELIADVAGHFPLRVPAPTPKALYSPCEIRHLAIIVNLEHDPTAVFRNQVVHFDFRKLDVFSFGQQQCLVGSIDLLYRDSWNEVRTLHFSGEQAVLEALKTILGKMHQDAAPPDTVEVFCYSQHLRGLIRTRVQQLVSECIELRLSSTRQDPARFKAVRVAGQTWGLFFERLSVSVQKLENAVEFYGAISNNKLHGLSIQMETEQIHLPPVVDGFASEGIIQFFFEDTTDDSGCNIYILDETNRVEAYHHCEGSKEELVRDVSRFYSSSHDRFTYGSSFINFNLPQFYQIMNLDGRIQVVPFRSSVLSHLCATPLENGAPPLAQNARSS
SIO_010081: SOPEG_RS01695
subclass of: SO_0000673
so part of: SOPEG_RS01695
location: complement(320017..322566)
location: region:320017-322566:-1
so has part: feature:320017-322566:-1:exon

WP_025244079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:320017-322566:-1:exon

SOPEG_RS01700
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: hemC
locus tag: SOPEG_RS01700
old locus tag: SOPEG_0333
so part of: sequence
location: 322855..323796
location: region:322855-323796:1
so has part: feature:322855-323796:1:exon
subclass of: SO_0000010

position:322855:1
position: 322855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323796:1
position: 323796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322855-323796:1:exon

SOPEG_RS01700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: hemC
locus tag: SOPEG_RS01700
old locus tag: SOPEG_0333
EC number: 2.5.1.61
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002211465.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
GO process: GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydroxymethylbilane synthase
translation: MQDNLLRIATRQSPLALWQAGYVRDALLRHHPHLQVELVPLVTRGDILLDTPLAKVGGKGLFIKELERALLEHRADIAVHSMKDVTVSFPDGLGLCVLCERDDPRDAFVSSHYANLDALPPGAIIGTSSLRRQCQLRERRPDLQVRDLRGNVGTRLAKLDRGDFDAIILAVAGLKRLGLVDRIRQAIDPADSLPAVGQGAVGIECRLDDARTLALLAPLHHRETALRVGAERAMNARLQSGCQVPIGSYAVLDGDQVWLRVLVGSPDGTTVIRSEGRAPLALAEQLGLRLADDLLDRGARAILAQVYQDDPPQ
SIO_010081: SOPEG_RS01700
subclass of: SO_0000673
so part of: SOPEG_RS01700
location: 322855..323796
location: region:322855-323796:1
so has part: feature:322855-323796:1:exon

WP_025244080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:322855-323796:1:exon

SOPEG_RS01705
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: hemD
locus tag: SOPEG_RS01705
old locus tag: SOPEG_0334
so part of: sequence
location: 323793..324533
location: region:323793-324533:1
so has part: feature:323793-324533:1:exon
subclass of: SO_0000010

position:323793:1
position: 323793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324533:1
position: 324533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323793-324533:1:exon

SOPEG_RS01705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: hemD
locus tag: SOPEG_RS01705
old locus tag: SOPEG_0334
EC number: 4.2.1.75
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013975444.1
GO function: GO:0004852 - uroporphyrinogen-III synthase activity [Evidence IEA]
GO process: GO:0006780 - uroporphyrinogen III biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uroporphyrinogen-III synthase
translation: MSILVTRPSPAGEQLVNRLRARGKSAWHLPLIDFTPGNDLPHLPQRLADLSDGDLLFIVSQHAINYAHPWLTQQGVSWPPGLHYFAVGRSTGLRLHDLSGLPISYPDEGETSEDLLRLPALARINGKRALILRGNGGRDVLEKTLRQRGVQATYCECYRRSPIHYDGEEQGRRMRTLGIDTLVITSGEMLQQFYTLMPEYYRRTWLMPCRLIVVSERLAMLARQLGWTNIVVANAADNDALMRVLL
SIO_010081: SOPEG_RS01705
subclass of: SO_0000673
so part of: SOPEG_RS01705
location: 323793..324533
location: region:323793-324533:1
so has part: feature:323793-324533:1:exon

WP_025244081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:323793-324533:1:exon

SOPEG_RS01710
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: hemX
locus tag: SOPEG_RS01710
old locus tag: SOPEG_0335
so part of: sequence
location: 324542..325774
location: region:324542-325774:1
so has part: feature:324542-325774:1:exon
subclass of: SO_0000010

position:324542:1
position: 324542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325774:1
position: 325774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324542-325774:1:exon

SOPEG_RS01710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: hemX
locus tag: SOPEG_RS01710
old locus tag: SOPEG_0335
EC number: 2.1.1.107
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412174.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uroporphyrinogen-III C-methyltransferase
translation: MGQANMTEHTTSTIPQDDATKKTDSPHASTPLSGDAEPRPAAPSRLAGGKIPPAGNGTPGKTAGGRRPLALILAALALAIAVLLAIGVYIAARQQAHQQEAARAQLQASLVELNQAQQTQRQQYQESLAAQRQALDAARAQQAAQGRELEDLQNKLTAITGTNANTWLLSQADFLVKMAGRKLWSDRDVVTAGALLKSADASLAQMNDPSLTEARRAITEDIGTLAGVSQIDFDGIILKLNQLTNQVDNLRLADNDSDESSMDSDSGELSGSIQEWRQNLSKSWHNFMNDFITVRRRDTGAEPLLAPNQDVYLRENIRARLLVAAQAVPRHQNEIYQQSLDSVSTWVRAYFDADDANTRAFLSQLDALGQEDITMNLPDSLQSQPLLDKLTQTRVRNLLAQPASPAAQGE
SIO_010081: SOPEG_RS01710
subclass of: SO_0000673
so part of: SOPEG_RS01710
location: 324542..325774
location: region:324542-325774:1
so has part: feature:324542-325774:1:exon

WP_038468059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324542-325774:1:exon

SOPEG_RS01715
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: hemY
locus tag: SOPEG_RS01715
old locus tag: SOPEG_0336
so part of: sequence
location: 325778..327061
location: region:325778-327061:1
so has part: feature:325778-327061:1:exon
subclass of: SO_0000010

position:325778:1
position: 325778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327061:1
position: 327061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325778-327061:1:exon

SOPEG_RS01715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: hemY
locus tag: SOPEG_RS01715
old locus tag: SOPEG_0336
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009111049.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0042168 - heme metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protoheme IX biogenesis protein HemY
translation: MIKVLLLFILLFAGIVLGPLIAGHQGYVLIQTDNYNIETSVTGLVIILILTFIVLFIIEWAIRRLFRTGARTRRWFHGRKNHRARKHTSAALMKLAEGDYRQVEKLLARNADHADQPVVNYLLAAEVAQQRGDDLRTNQYLARAAEVADNDQLPVDITRVRIQLARHEDHAARHGVDRLLETAPRHPEVLRLAEQAFIRTHAWQSLLDILPAMRKVQVYDEATINRLQYQAFNGLMDQIMENQGSEGLNRWWRDQSRKVRNDASLQVALAEHLIECNDHDTAQRLIVKALKHRTDDELLLLLPRLKNGDPEQVEKALRLQIRQQGDTPLLSSTLGQLLMKRGEWQAAADAFRAALKQRPDAHDYAWLADVLDRLHKPEESAQMRREGLMLTLAASPSKTPGASLAPQTPANDTRAEPVKTPPADPRP
SIO_010081: SOPEG_RS01715
subclass of: SO_0000673
so part of: SOPEG_RS01715
location: 325778..327061
location: region:325778-327061:1
so has part: feature:325778-327061:1:exon

WP_025244083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:325778-327061:1:exon

SOPEG_RS01720
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01720
old locus tag: SOPEG_0337
so part of: sequence
location: complement(327200..328051)
location: region:327200-328051:-1
so has part: feature:327200-328051:-1:exon
subclass of: SO_0000010

position:327200:-1
position: 327200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328051:-1
position: 328051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327200-328051:-1:exon

SOPEG_RS01720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01720
old locus tag: SOPEG_0337
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020077791.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fumarylacetoacetate hydrolase family protein
translation: MKLLRYGPPGEERPALPDGDGQLRSLAGEIEDIAGETLLPAALDRLRALDPATLPKVAGDPRIGPCVGRVGKFVCIRLNYADHAAETDAAIPTESIVFNKWISVISGPFDALHIPRGSLKTDWEVELGVVIGQGGRDIAEQDALQHVAGYCVVNDVSERNWQLERGGTWDKGKGYDSFGPIGPWLVTADEDEIADPQALQLWLEVDGKRYQAGSTATMIFSVKEIISYLSRFMRLLPGDIIATGTPPGVGMGQKPQPVFLRAGQRLRLGVEGLGEQRQLTVQD
SIO_010081: SOPEG_RS01720
subclass of: SO_0000673
so part of: SOPEG_RS01720
location: complement(327200..328051)
location: region:327200-328051:-1
so has part: feature:327200-328051:-1:exon

WP_025244084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327200-328051:-1:exon

SOPEG_RS01725
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01725
old locus tag: SOPEG_ps0338
so part of: sequence
location: complement(328357..329052)
location: region:328357-329052:-1
so has part: feature:328357-329052:-1:exon
subclass of: SO_0000010

position:328357:-1
position: 328357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329052:-1
position: 329052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328357-329052:-1:exon

SOPEG_RS01725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01725
old locus tag: SOPEG_ps0338
inference: COORDINATES: protein motif:HMM:NF024880.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MQQRVDPAGKAIADIGCGGGIYSAAWAGLGARQVTGQDEQETVQGLTNVAFVQGDATATGLADASQDIVFARALIHHFDSPHPFLHEAWRILAPGGLLLIQDRTPEDVFLPGSPEHMRGWFFDLFPQLAAIERARRPPRAAIEAAITAAGFELRPTTTLWETRREYADSAALAADLRGRTGRSILHELSDEALAQMIAYILARLTAGQPIVENDRWTFWWAQKPDVAGNCL
SIO_010081: SOPEG_RS01725
subclass of: SO_0000673
so part of: SOPEG_RS01725
location: complement(328357..329052)
location: region:328357-329052:-1
so has part: feature:328357-329052:-1:exon

WP_257720374.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328357-329052:-1:exon

SOPEG_RS01730
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01730
old locus tag: SOPEG_ps0339
so part of: sequence
location: complement(329343..329600)
location: region:329343-329600:-1
so has part: feature:329343-329600:-1:exon
subclass of: SO_0000010

position:329343:-1
position: 329343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329600:-1
position: 329600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329343-329600:-1:exon

SOPEG_RS01730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01730
old locus tag: SOPEG_ps0339
inference: COORDINATES: protein motif:HMM:NF022255.2
GO process: GO:0071468 - cellular response to acidic pH [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: biofilm development regulator YmgB/AriR family protein
translation: MSSVNVETGQPIASPATLPAAGAAGADGLLTTIIEEIQLTGRPVTHKLILAVLLERLETEHDPQMQDRYREALNSFMHTSVMDDI
SIO_010081: SOPEG_RS01730
subclass of: SO_0000673
so part of: SOPEG_RS01730
location: complement(329343..329600)
location: region:329343-329600:-1
so has part: feature:329343-329600:-1:exon

WP_025244085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:329343-329600:-1:exon

SOPEG_RS01740
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01740
old locus tag: SOPEG_ps0341
pseudo: true
so part of: sequence
location: complement(329911..330771)
location: region:329911-330771:-1
so has part: feature:329911-330771:-1:exon
subclass of: SO_0000010

position:329911:-1
position: 329911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330771:-1
position: 330771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329911-330771:-1:exon

SOPEG_RS01740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01740
old locus tag: SOPEG_ps0341
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006687642.1
GO function: GO:0016832 - aldehyde-lyase activity [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ketose-bisphosphate aldolase
SIO_010081: SOPEG_RS01740
subclass of: SO_0000673
so part of: SOPEG_RS01740
location: complement(329911..330771)
location: region:329911-330771:-1
so has part: feature:329911-330771:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329911-330771:-1:exon

SOPEG_RS01745
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01745
old locus tag: SOPEG_0342
so part of: sequence
location: complement(330859..331710)
location: region:330859-331710:-1
so has part: feature:330859-331710:-1:exon
subclass of: SO_0000010

position:330859:-1
position: 330859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331710:-1
position: 331710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330859-331710:-1:exon

SOPEG_RS01745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01745
old locus tag: SOPEG_0342
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012773042.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class II fructose-bisphosphate aldolase
translation: MFAAIKSLLADASRRRYALLAINCFNLETARATIRAAEQQRAPMILNLYQGHCGHLPPRVAVPLIRALADEAAVPVTLSLDHGSDAAIIGQAFRAGFSGLMIDASSQPLAENIRQTRQVVQLAATDGVCVEGELGHIADAPVYQIADARQMMTAVEDVEPFLRQTGIDLLAISVGTAHGLYPPGVTPEVDFERLEAIHRVSRVPLALHGGSGTRPEDIRRVSQHGVAKINVGVAVAQAGKTALHDGLRQHPDAELADMLRLMESACQEVVAEYLGWSGSAHKA
SIO_010081: SOPEG_RS01745
subclass of: SO_0000673
so part of: SOPEG_RS01745
location: complement(330859..331710)
location: region:330859-331710:-1
so has part: feature:330859-331710:-1:exon

WP_025244087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330859-331710:-1:exon

SOPEG_RS01750
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01750
old locus tag: SOPEG_ps0343
pseudo: true
so part of: sequence
location: complement(331722..332814)
location: region:331722-332814:-1
so has part: feature:331722-332814:-1:exon
subclass of: SO_0000010

position:331722:-1
position: 331722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332814:-1
position: 332814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331722-332814:-1:exon

SOPEG_RS01750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01750
old locus tag: SOPEG_ps0343
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009112672.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: PTS fructose transporter subunit IIC
SIO_010081: SOPEG_RS01750
subclass of: SO_0000673
so part of: SOPEG_RS01750
location: complement(331722..332814)
location: region:331722-332814:-1
so has part: feature:331722-332814:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:331722-332814:-1:exon

SOPEG_RS01755
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01755
old locus tag: SOPEG_ps0344
pseudo: true
so part of: sequence
location: complement(332841..333157)
location: region:332841-333157:-1
so has part: feature:332841-333157:-1:exon
subclass of: SO_0000010

position:332841:-1
position: 332841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333157:-1
position: 333157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332841-333157:-1:exon

SOPEG_RS01755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01755
old locus tag: SOPEG_ps0344
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009127717.1
GO function: GO:0022877 - protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity [Evidence IEA]; GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
GO process: GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: fructose PTS transporter subunit IIB
SIO_010081: SOPEG_RS01755
subclass of: SO_0000673
so part of: SOPEG_RS01755
location: complement(332841..333157)
location: region:332841-333157:-1
so has part: feature:332841-333157:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:332841-333157:-1:exon

SOPEG_RS01760
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01760
old locus tag: SOPEG_ps0345
so part of: sequence
location: complement(333206..333652)
location: region:333206-333652:-1
so has part: feature:333206-333652:-1:exon
subclass of: SO_0000010

position:333206:-1
position: 333206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333652:-1
position: 333652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333206-333652:-1:exon

SOPEG_RS01760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01760
old locus tag: SOPEG_ps0345
EC number: 2.7.1.202
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007370547.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
GO process: GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fructose PTS transporter subunit IIA
translation: MDINKILTPRRVNLNMQATNKEDAIQELADLLYDDGALTSKEDFIQDVWQREAEGSTGFENHIAIPHGKSQAVKQTTLAIGRTAQDIPWETLDGSKVRCIILFAVRLEDQNTTHIRLLSQVAAALADDDVIDRLLTETDANNIIALFS
SIO_010081: SOPEG_RS01760
subclass of: SO_0000673
so part of: SOPEG_RS01760
location: complement(333206..333652)
location: region:333206-333652:-1
so has part: feature:333206-333652:-1:exon

WP_038468062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333206-333652:-1:exon

SOPEG_RS01765
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01765
old locus tag: SOPEG_ps0346
pseudo: true
so part of: sequence
location: complement(333639..>334975)
location: region:333639-334975:-1
so has part: feature:333639-334975:-1:exon
subclass of: SO_0000010

position:333639:-1
position: 333639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334975:-1
position: 334975
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333639-334975:-1:exon

SOPEG_RS01765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01765
old locus tag: SOPEG_ps0346
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014594630.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: PRD domain-containing protein
SIO_010081: SOPEG_RS01765
subclass of: SO_0000673
so part of: SOPEG_RS01765
location: complement(333639..>334975)
location: region:333639-334975:-1
so has part: feature:333639-334975:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:333639-334975:-1:exon

SOPEG_RS23800
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS23800
old locus tag: SOPEG_ps0347
pseudo: true
so part of: sequence
location: complement(335068..>335334)
location: region:335068-335334:-1
so has part: feature:335068-335334:-1:exon
subclass of: SO_0000010

position:335068:-1
position: 335068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335334:-1
position: 335334
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335068-335334:-1:exon

SOPEG_RS23800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS23800
old locus tag: SOPEG_ps0347
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: SOPEG_RS23800
subclass of: SO_0000673
so part of: SOPEG_RS23800
location: complement(335068..>335334)
location: region:335068-335334:-1
so has part: feature:335068-335334:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:335068-335334:-1:exon

SOPEG_RS23805
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: istA
locus tag: SOPEG_RS23805
old locus tag: SOPEG_ps0348
pseudo: true
so part of: sequence
location: 335475..337024
location: region:335475-337024:1
so has part: feature:335475-337024:1:exon
subclass of: SO_0000010

position:335475:1
position: 335475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337024:1
position: 337024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335475-337024:1:exon

SOPEG_RS23805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: istA
locus tag: SOPEG_RS23805
old locus tag: SOPEG_ps0348
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025245097.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21 family transposase
SIO_010081: SOPEG_RS23805
subclass of: SO_0000673
so part of: SOPEG_RS23805
location: 335475..337024
location: region:335475-337024:1
so has part: feature:335475-337024:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:335475-337024:1:exon

SOPEG_RS01785
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: istB
locus tag: SOPEG_RS01785
old locus tag: SOPEG_0349
so part of: sequence
location: 337036..337785
location: region:337036-337785:1
so has part: feature:337036-337785:1:exon
subclass of: SO_0000010

position:337036:1
position: 337036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337785:1
position: 337785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337036-337785:1:exon

SOPEG_RS01785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: istB
locus tag: SOPEG_RS01785
old locus tag: SOPEG_0349
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025245096.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element ISSoEn3 family helper ATPase IstB
translation: MDTLLMALRELKLSAMVQALETQRELPGSYGELGFEERLSLMVEAENLHRKNNHICRLRRQSQMRLQAKPEDIRYIPSRGVTPEQMRDLLGGQYLKYQKSILITGPTGTGKTWISCALGEQACRQQYSVRYWRVGRLLAHLHQCQVDGTYLKQLNQLEKIELLILDEMGLESISPMQATILLEVMEDRYDKSSSILISQLPVKKWYGLIENPTTADALLDRLVHPSYRLELKGESLRKEQGVASTGKID
SIO_010081: SOPEG_RS01785
subclass of: SO_0000673
so part of: SOPEG_RS01785
location: 337036..337785
location: region:337036-337785:1
so has part: feature:337036-337785:1:exon

WP_025244089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337036-337785:1:exon

SOPEG_RS01790
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01790
old locus tag: SOPEG_0350
so part of: sequence
location: 338014..339222
location: region:338014-339222:1
so has part: feature:338014-339222:1:exon
subclass of: SO_0000010

position:338014:1
position: 338014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339222:1
position: 339222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338014-339222:1:exon

SOPEG_RS01790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01790
old locus tag: SOPEG_0350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256-like element ISSoEn2 family transposase
translation: MDEKQLQALANELAKNLKTPEDLSHFDRLLKKISVEAALNAEMTHHLGYDKNQPKPGTNARNGYSTKTVITGDGPLALRTPRDRDGSFEPQLVKKNQTRITGMDNQILSLYAKGMTTREIAAAFKELYDADVSPALVSKVTDAVMEQVVEWQNRPLDAVYPIVYLDCIVLKVRQDSRIINKSVFLALGINIEGQKELLGMWLAENEGAKFWLNVLTELKNRGLNDILIACVDGLKGFPDAINAVYPEARLQLCIVHMVRNSLRFVSWKDYKAVTRDLKAIYQAPTEEAGLQALEAFSSAWDIRYPQISRSWQTNWANLATFFAYPTDIRKVIYTTNAIESLNSVIRHAIKKRKVFPTDDAVKKVVWLAIQAASQKWTMPLRDWRMAMSRFIIEFGDRLDGHF
SIO_010081: SOPEG_RS01790
subclass of: SO_0000673
so part of: SOPEG_RS01790
location: 338014..339222
location: region:338014-339222:1
so has part: feature:338014-339222:1:exon

WP_025244090.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:338014-339222:1:exon

SOPEG_RS30345
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS30345
so part of: sequence
location: complement(339130..339399)
location: region:339130-339399:-1
so has part: feature:339130-339399:-1:exon
subclass of: SO_0000010

position:339130:-1
position: 339130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339399:-1
position: 339399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339130-339399:-1:exon

SOPEG_RS30345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS30345
inference: COORDINATES: protein motif:HMM:NF019016.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1488 domain-containing protein
translation: MNQAIHFPDLEQWDAERQSVCFPALVGGMRAECQVSAGWLCSRFSSAASPYRILCKCLFSEVTVQAVTELDNKAAHCHAPVPQRHCPFL
SIO_010081: SOPEG_RS30345
subclass of: SO_0000673
so part of: SOPEG_RS30345
location: complement(339130..339399)
location: region:339130-339399:-1
so has part: feature:339130-339399:-1:exon

WP_071882111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:339130-339399:-1:exon

SOPEG_RS01795
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: aroE
locus tag: SOPEG_RS01795
old locus tag: SOPEG_0352
so part of: sequence
location: complement(339396..340214)
location: region:339396-340214:-1
so has part: feature:339396-340214:-1:exon
subclass of: SO_0000010

position:339396:-1
position: 339396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340214:-1
position: 340214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339396-340214:-1:exon

SOPEG_RS01795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: aroE
locus tag: SOPEG_RS01795
old locus tag: SOPEG_0352
EC number: 1.1.1.25
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002919126.1
GO function: GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity [Evidence IEA]
GO process: GO:0019632 - shikimate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: shikimate dehydrogenase
translation: MDTYAVFGNPINHSRSPRIHALFAAETGLAHPYGRVLAPLDGFEQTLRQFFDAGGLGANITLPFKERAFSLCDQLTERGSLAGAVNTIKKLPDGTLLGDNTDGIGLVSDLQRLALLRQDSRVLLVGAGGAARGVILPLLSYGCKVVLTNRTFPRAQELVEFYHHVGDISALPLERLGTPDYDLIINATSTGVQGGIPPLPASVIAPAVCCYDMFYQQGETPFIAWCRRHGALHCADGLGMLVGQAASAFFLWHGVLPSVLPVLETLRAELAA
SIO_010081: SOPEG_RS01795
subclass of: SO_0000673
so part of: SOPEG_RS01795
location: complement(339396..340214)
location: region:339396-340214:-1
so has part: feature:339396-340214:-1:exon

WP_025244091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:339396-340214:-1:exon

SOPEG_RS01800
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: tsaC
locus tag: SOPEG_RS01800
old locus tag: SOPEG_0353
so part of: sequence
location: complement(340234..340806)
location: region:340234-340806:-1
so has part: feature:340234-340806:-1:exon
subclass of: SO_0000010

position:340234:-1
position: 340234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340806:-1
position: 340806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340234-340806:-1:exon

SOPEG_RS01800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: tsaC
locus tag: SOPEG_RS01800
old locus tag: SOPEG_0353
EC number: 2.7.7.87
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014888126.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003725 - double-stranded RNA binding [Evidence IEA]
GO process: GO:0002949 - tRNA threonylcarbamoyladenosine modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-threonylcarbamoyladenylate synthase type 1 TsaC
translation: MKNETLLPDLTNVVTALRQQQVIAYPTEAVFGLGCDPDSESAVQALLKLKQRPWQKGLILVAEHYAQLTDYIDDSALDNAARERMFACWPGPVTWVVPARPTTPRWLTGQYASLAVRVSAFEPVRRLCLAFGKPLVSTSANLIGLPPARTAGEVREQLGAVFPVLDEAVEGRCNPSEIRDALSGELIRQG
SIO_010081: SOPEG_RS01800
subclass of: SO_0000673
so part of: SOPEG_RS01800
location: complement(340234..340806)
location: region:340234-340806:-1
so has part: feature:340234-340806:-1:exon

WP_025244092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340234-340806:-1:exon

SOPEG_RS01805
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01805
old locus tag: SOPEG_0354
so part of: sequence
location: complement(340796..341350)
location: region:340796-341350:-1
so has part: feature:340796-341350:-1:exon
subclass of: SO_0000010

position:340796:-1
position: 340796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341350:-1
position: 341350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340796-341350:-1:exon

SOPEG_RS01805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01805
old locus tag: SOPEG_0354
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412055.1
GO component: GO:0005694 - chromosome [Evidence IEA]
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: topoisomerase DNA-binding C4 zinc finger domain-containing protein
translation: MTKAALFSAKHPASCPQCGVELVIRSGQHGPFLGCSHYPQCDYIRSLKPQGDGHVVKVLEGQLCPECQSTLVLRQGRFGIFIGCSNYPECGHIAPTAVADATAFTCPQCRTGKLVQRTSRFGKSFYACDRYPACKYALNNQPVAGECAYCHFPLLMEKNTARGAKRFCADKGCGRPVATNDNEE
SIO_010081: SOPEG_RS01805
subclass of: SO_0000673
so part of: SOPEG_RS01805
location: complement(340796..341350)
location: region:340796-341350:-1
so has part: feature:340796-341350:-1:exon

WP_025244093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340796-341350:-1:exon

SOPEG_RS01810
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01810
old locus tag: SOPEG_0355
so part of: sequence
location: complement(341374..341847)
location: region:341374-341847:-1
so has part: feature:341374-341847:-1:exon
subclass of: SO_0000010

position:341374:-1
position: 341374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341847:-1
position: 341847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341374-341847:-1:exon

SOPEG_RS01810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01810
old locus tag: SOPEG_0355
inference: COORDINATES: similar to AA sequence:RefSeq:NP_462308.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF494 family protein
translation: MFDVLMYLFETYIHNEVEMCVDQDKLTDDLTRAGFHQDDIYNALNWLEKLADLQDGQGRAFALNADPLAMRIYTDEESQFLDTDCRGFLLFLEQIQVLNLETREMVIDRVMALDAAKFDLEDLKWVILMVLFNIPGCENAYQQMEDLVFEEDEQRLH
SIO_010081: SOPEG_RS01810
subclass of: SO_0000673
so part of: SOPEG_RS01810
location: complement(341374..341847)
location: region:341374-341847:-1
so has part: feature:341374-341847:-1:exon

WP_025244094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:341374-341847:-1:exon

SOPEG_RS01815
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: dprA
locus tag: SOPEG_RS01815
old locus tag: SOPEG_ps0356
pseudo: true
so part of: sequence
location: complement(341819..342938)
location: region:341819-342938:-1
so has part: feature:341819-342938:-1:exon
subclass of: SO_0000010

position:341819:-1
position: 341819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342938:-1
position: 342938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341819-342938:-1:exon

SOPEG_RS01815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: dprA
locus tag: SOPEG_RS01815
old locus tag: SOPEG_ps0356
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002445347.1
GO process: GO:0009294 - DNA-mediated transformation [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA-protecting protein DprA
SIO_010081: SOPEG_RS01815
subclass of: SO_0000673
so part of: SOPEG_RS01815
location: complement(341819..342938)
location: region:341819-342938:-1
so has part: feature:341819-342938:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:341819-342938:-1:exon

SOPEG_RS01820
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: def
locus tag: SOPEG_RS01820
old locus tag: SOPEG_0357
so part of: sequence
location: 343071..343586
location: region:343071-343586:1
so has part: feature:343071-343586:1:exon
subclass of: SO_0000010

position:343071:1
position: 343071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343586:1
position: 343586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343071-343586:1:exon

SOPEG_RS01820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: def
locus tag: SOPEG_RS01820
old locus tag: SOPEG_0357
EC number: 3.5.1.88
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412057.1
GO function: GO:0042586 - peptide deformylase activity [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide deformylase
translation: MSLLQVLHYPDERLRKVAKPVADVNDAIRRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDQRLVLINPELLEKSGETGIDEGCLSIPDQRGFVPRAEKVKVRALDRDGNSFELETDDLLAICIQHEMDHLVGKLFVDYLSPLKRQRIRQKMEKLARMTARAEK
SIO_010081: SOPEG_RS01820
subclass of: SO_0000673
so part of: SOPEG_RS01820
location: 343071..343586
location: region:343071-343586:1
so has part: feature:343071-343586:1:exon

WP_025244096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:343071-343586:1:exon

SOPEG_RS01825
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: fmt
locus tag: SOPEG_RS01825
old locus tag: SOPEG_0358
so part of: sequence
location: 343609..344565
location: region:343609-344565:1
so has part: feature:343609-344565:1:exon
subclass of: SO_0000010

position:343609:1
position: 343609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344565:1
position: 344565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343609-344565:1:exon

SOPEG_RS01825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: fmt
locus tag: SOPEG_RS01825
old locus tag: SOPEG_0358
EC number: 2.1.2.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412058.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
GO process: GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionyl-tRNA formyltransferase
translation: MSDSLRIIFAGTPDFAVRHLDALIRAQHQVVGVFTQPDRPAGRGNRLTPSPVKQLAERHSLPVFQPSSLRKPEGQGWVAALKADIMVVVAYGLILPQAVLDLPRLGCINVHGSLLPRWRGAAPIQRALWAGDDRTGVTIMQIDAGLDTGAMLHKATCVIEPNDTSASLYDKLAQIGPDALLSTLEQLAAGRAAAEPQDNALATYADKPSKDEAQLDWRLPAAQLERCIRAFNPWPISYFPLSGQPIKVWAASVDARQTASCAPGTIVAVDKAGIHIATGQGMLTLTQLQPAGKKAMPVQDLLNSRPEWFIPGTLLDNC
SIO_010081: SOPEG_RS01825
subclass of: SO_0000673
so part of: SOPEG_RS01825
location: 343609..344565
location: region:343609-344565:1
so has part: feature:343609-344565:1:exon

WP_025244097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:343609-344565:1:exon

SOPEG_RS26965
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS26965
old locus tag: SOPEG_ps0359
pseudo: true
so part of: sequence
location: complement(344867..>345046)
location: region:344867-345046:-1
so has part: feature:344867-345046:-1:exon
subclass of: SO_0000010

position:344867:-1
position: 344867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345046:-1
position: 345046
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344867-345046:-1:exon

SOPEG_RS26965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS26965
old locus tag: SOPEG_ps0359
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: SOPEG_RS26965
subclass of: SO_0000673
so part of: SOPEG_RS26965
location: complement(344867..>345046)
location: region:344867-345046:-1
so has part: feature:344867-345046:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:344867-345046:-1:exon

SOPEG_RS01835
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01835
old locus tag: SOPEG_ps0360
so part of: sequence
location: 345119..346357
location: region:345119-346357:1
so has part: feature:345119-346357:1:exon
subclass of: SO_0000010

position:345119:1
position: 345119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346357:1
position: 346357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345119-346357:1:exon

SOPEG_RS01835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01835
old locus tag: SOPEG_ps0360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256-like element ISSoEn2 family transposase
translation: MDEKQLQALANELAKNLKTPEDLSHFDRLLKKISVEAALNAEMTHHLGYDKNQPKPGTNARNGYSTKTVTTGDGPLALRTPRDRDGSFEPQLVKKNQTRITGMDNQILSLYAKGMTTREIAAAFKELYDAYVSPALVSKVTDAVMEQVVEWQNRPLDAVYPIVYLDCIVLKVRQDSRIINKSVFLALGINIEGQKELLGMWLAENEGAKFWLNVLTELKNRGLNDILIACVDGLKGFPDTINAVYPEARLQLCIVHMVRNSLRFVSWKDYKAVTRDLKAIYQAPTEEAGLQALEAFSSAWDIRYPQISRSWQANWANLATFFAYPTDIRKVIYTTNAIESLNSVIRHAIKKRKVFPTDDAVKKVVWLAIQAASQKWTMPLRDWRMAMSRFIIEFGERLDGHRRACLEICVFA
SIO_010081: SOPEG_RS01835
subclass of: SO_0000673
so part of: SOPEG_RS01835
location: 345119..346357
location: region:345119-346357:1
so has part: feature:345119-346357:1:exon

WP_025244098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:345119-346357:1:exon

SOPEG_RS23815
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS23815
pseudo: true
so part of: sequence
location: complement(<346470..>346586)
location: region:346470-346586:-1
so has part: feature:346470-346586:-1:exon
subclass of: SO_0000010

position:346470:-1
position: 346470
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:346586:-1
position: 346586
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346470-346586:-1:exon

SOPEG_RS23815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS23815
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006708494.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: PhoU domain-containing protein
SIO_010081: SOPEG_RS23815
subclass of: SO_0000673
so part of: SOPEG_RS23815
location: complement(<346470..>346586)
location: region:346470-346586:-1
so has part: feature:346470-346586:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:346470-346586:-1:exon

SOPEG_RS01840
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01840
old locus tag: SOPEG_ps0362
pseudo: true
so part of: sequence
location: complement(<346588..347274)
location: region:346588-347274:-1
so has part: feature:346588-347274:-1:exon
subclass of: SO_0000010

position:346588:-1
position: 346588
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:347274:-1
position: 347274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346588-347274:-1:exon

SOPEG_RS01840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01840
old locus tag: SOPEG_ps0362
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017490418.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: phosphate ABC transporter ATP-binding protein
SIO_010081: SOPEG_RS01840
subclass of: SO_0000673
so part of: SOPEG_RS01840
location: complement(<346588..347274)
location: region:346588-347274:-1
so has part: feature:346588-347274:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:346588-347274:-1:exon

SOPEG_RS01845
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01845
old locus tag: SOPEG_ps0363
pseudo: true
so part of: sequence
location: complement(347313..>347738)
location: region:347313-347738:-1
so has part: feature:347313-347738:-1:exon
subclass of: SO_0000010

position:347313:-1
position: 347313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347738:-1
position: 347738
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347313-347738:-1:exon

SOPEG_RS01845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01845
old locus tag: SOPEG_ps0363
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004707315.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ABC transporter permease subunit
SIO_010081: SOPEG_RS01845
subclass of: SO_0000673
so part of: SOPEG_RS01845
location: complement(347313..>347738)
location: region:347313-347738:-1
so has part: feature:347313-347738:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:347313-347738:-1:exon

SOPEG_RS26970
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS26970
old locus tag: SOPEG_ps0364
pseudo: true
so part of: sequence
location: <347725..347934
location: region:347725-347934:1
so has part: feature:347725-347934:1:exon
subclass of: SO_0000010

position:347725:1
position: 347725
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:347934:1
position: 347934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347725-347934:1:exon

SOPEG_RS26970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS26970
old locus tag: SOPEG_ps0364
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611744.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: SOPEG_RS26970
subclass of: SO_0000673
so part of: SOPEG_RS26970
location: <347725..347934
location: region:347725-347934:1
so has part: feature:347725-347934:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:347725-347934:1:exon

SOPEG_RS01855
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01855
old locus tag: SOPEG_ps0365
so part of: sequence
location: complement(347980..348204)
location: region:347980-348204:-1
so has part: feature:347980-348204:-1:exon
subclass of: SO_0000010

position:347980:-1
position: 347980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348204:-1
position: 348204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347980-348204:-1:exon

SOPEG_RS01855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01855
old locus tag: SOPEG_ps0365
inference: COORDINATES: protein motif:HMM:NF012514.2
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NUDIX domain-containing protein
translation: MSRYVKDIRAMIGHRPLLLAGSNVIILDERGDILLQQRLNGYRGLPEGLLELGESLEETARREVLEETGLTALC
SIO_010081: SOPEG_RS01855
subclass of: SO_0000673
so part of: SOPEG_RS01855
location: complement(347980..348204)
location: region:347980-348204:-1
so has part: feature:347980-348204:-1:exon

WP_081742897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:347980-348204:-1:exon

SOPEG_RS01860
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01860
so part of: sequence
location: complement(348207..348521)
location: region:348207-348521:-1
so has part: feature:348207-348521:-1:exon
subclass of: SO_0000010

position:348207:-1
position: 348207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348521:-1
position: 348521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348207-348521:-1:exon

SOPEG_RS01860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01860
inference: COORDINATES: protein motif:HMM:NF013227.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DegT/DnrJ/EryC1/StrS family aminotransferase
translation: MSTYKDFSIQVDKQLFGCDRDVLEAALCAEGIPTRRYFFPVVHKMKAYKEFNATVLPVSENIAATIFCLPIYPLLPLNDIAVISSAIAKIQRQAHRIANYIDGS
SIO_010081: SOPEG_RS01860
subclass of: SO_0000673
so part of: SOPEG_RS01860
location: complement(348207..348521)
location: region:348207-348521:-1
so has part: feature:348207-348521:-1:exon

WP_038468070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:348207-348521:-1:exon

SOPEG_RS01865
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01865
old locus tag: SOPEG_0367
so part of: sequence
location: 348601..349524
location: region:348601-349524:1
so has part: feature:348601-349524:1:exon
subclass of: SO_0000010

position:348601:1
position: 348601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349524:1
position: 349524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348601-349524:1:exon

SOPEG_RS01865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01865
old locus tag: SOPEG_0367
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDLTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDSIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKIFGEGEWKVRQHGAERRRVWRKLHLAVDSATHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKILLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS01865
subclass of: SO_0000673
so part of: SOPEG_RS01865
location: 348601..349524
location: region:348601-349524:1
so has part: feature:348601-349524:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:348601-349524:1:exon

SOPEG_RS01870
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01870
so part of: sequence
location: complement(349517..350455)
location: region:349517-350455:-1
so has part: feature:349517-350455:-1:exon
subclass of: SO_0000010

position:349517:-1
position: 349517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350455:-1
position: 350455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349517-350455:-1:exon

SOPEG_RS01870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01870
inference: COORDINATES: protein motif:HMM:NF013227.2
GO function: GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
translation: MKGKPAILYGVKAYSQGIPFLKPYIPSIATIKESIAEILASGMLTKEKYLQAYEDKAKAYSEDAQMNVVAVSSATIGLTLTLQALGITGDVLVPSFTFCASANAIVQTGAKPVFVDCCPDTYNISISALAQKITNQTEAILAVHVFGVPADCLALEKLAKAHNIKLIFDAAHGMGSTLDNIKIGRFGDAEVFSTTPMKTLVTGEGGLIFTRDAVLAQRLRTYREYGNLGDYDCTYVGTNGRLNEISCLMGVTSFDLLPENIRLHNAAANAYTQRLKSVPGISLQHIPNNVVSALLNKSEICDDFLPIRAIVT
SIO_010081: SOPEG_RS01870
subclass of: SO_0000673
so part of: SOPEG_RS01870
location: complement(349517..350455)
location: region:349517-350455:-1
so has part: feature:349517-350455:-1:exon

WP_025244101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349517-350455:-1:exon

SOPEG_RS01875
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01875
old locus tag: SOPEG_ps0368
pseudo: true
so part of: sequence
location: complement(350452..351450)
location: region:350452-351450:-1
so has part: feature:350452-351450:-1:exon
subclass of: SO_0000010

position:350452:-1
position: 350452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351450:-1
position: 351450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350452-351450:-1:exon

SOPEG_RS01875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS01875
old locus tag: SOPEG_ps0368
inference: COORDINATES: protein motif:HMM:NF013255.2
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: NAD-dependent epimerase/dehydratase family protein
SIO_010081: SOPEG_RS01875
subclass of: SO_0000673
so part of: SOPEG_RS01875
location: complement(350452..351450)
location: region:350452-351450:-1
so has part: feature:350452-351450:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:350452-351450:-1:exon

SOPEG_RS01885
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01885
old locus tag: SOPEG_t0369
so part of: sequence
location: complement(352224..352300)
location: region:352224-352300:-1
so has part: feature:352224-352300:-1:exon
subclass of: SO_0000663

position:352224:-1
position: 352224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352300:-1
position: 352300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352224-352300:-1:exon

SOPEG_RS01885
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2342
locus tag: SOPEG_RS01885
old locus tag: SOPEG_t0369
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(352264..352266),aa:Pro,seq:tgg)
SIO_010081: SOPEG_RS01885
subclass of: SO_0000673
so part of: SOPEG_RS01885
location: complement(352224..352300)
location: region:352224-352300:-1
so has part: feature:352224-352300:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:352224-352300:-1:exon

SOPEG_RS01890
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01890
old locus tag: SOPEG_t0370
so part of: sequence
location: complement(352382..352468)
location: region:352382-352468:-1
so has part: feature:352382-352468:-1:exon
subclass of: SO_0000663

position:352382:-1
position: 352382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352468:-1
position: 352468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352382-352468:-1:exon

SOPEG_RS01890
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2342
locus tag: SOPEG_RS01890
old locus tag: SOPEG_t0370
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(352432..352434),aa:Leu,seq:cag)
SIO_010081: SOPEG_RS01890
subclass of: SO_0000673
so part of: SOPEG_RS01890
location: complement(352382..352468)
location: region:352382-352468:-1
so has part: feature:352382-352468:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:352382-352468:-1:exon

SOPEG_RS01895
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01895
old locus tag: SOPEG_t0371
so part of: sequence
location: complement(352483..352558)
location: region:352483-352558:-1
so has part: feature:352483-352558:-1:exon
subclass of: SO_0000663

position:352483:-1
position: 352483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352558:-1
position: 352558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352483-352558:-1:exon

SOPEG_RS01895
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2342
locus tag: SOPEG_RS01895
old locus tag: SOPEG_t0371
product: tRNA-His
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(352523..352525),aa:His,seq:gtg)
SIO_010081: SOPEG_RS01895
subclass of: SO_0000673
so part of: SOPEG_RS01895
location: complement(352483..352558)
location: region:352483-352558:-1
so has part: feature:352483-352558:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:352483-352558:-1:exon

SOPEG_RS01900
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS01900
old locus tag: SOPEG_t0372
so part of: sequence
location: complement(352620..352696)
location: region:352620-352696:-1
so has part: feature:352620-352696:-1:exon
subclass of: SO_0000663

position:352620:-1
position: 352620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352696:-1
position: 352696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352620-352696:-1:exon

SOPEG_RS01900
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2342
locus tag: SOPEG_RS01900
old locus tag: SOPEG_t0372
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(352660..352662),aa:Arg,seq:ccg)
SIO_010081: SOPEG_RS01900
subclass of: SO_0000673
so part of: SOPEG_RS01900
location: complement(352620..352696)
location: region:352620-352696:-1
so has part: feature:352620-352696:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:352620-352696:-1:exon

SOPEG_RS01905
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rffM
locus tag: SOPEG_RS01905
old locus tag: SOPEG_0373
so part of: sequence
location: complement(352825..353565)
location: region:352825-353565:-1
so has part: feature:352825-353565:-1:exon
subclass of: SO_0000010

position:352825:-1
position: 352825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353565:-1
position: 353565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352825-353565:-1:exon

SOPEG_RS01905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rffM
locus tag: SOPEG_RS01905
old locus tag: SOPEG_0373
EC number: 2.4.1.180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412180.1
GO function: GO:0016740 - transferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipopolysaccharide N-acetylmannosaminouronosyltransferase
translation: MHNNDGVPHYQIRGLALWGFRDREEFIDYLFAGGRLKTGTLVAINAEKVLRAERDAALKQLLDEAEYKYADGISIVRSIRRKYRHAEVSRIAGADLWEDLMARAGREGVSVFLLGGRPVVLMQTEAQLRARWNVNIVGRQDGYFTADAQPALIERIRASGAAIVTVAMGSPRQEQLMQACRRVYPVALYMGVGGTYDVFTGHVKRAPKVWQDLGLEWLCRLLSQPSRLQRQLKLLRYLGYHISGRL
SIO_010081: SOPEG_RS01905
subclass of: SO_0000673
so part of: SOPEG_RS01905
location: complement(352825..353565)
location: region:352825-353565:-1
so has part: feature:352825-353565:-1:exon

WP_025244104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352825-353565:-1:exon

SOPEG_RS29050
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: wzyE
locus tag: SOPEG_RS29050
so part of: sequence
location: complement(353565..354941)
location: region:353565-354941:-1
so has part: feature:353565-354941:-1:exon
subclass of: SO_0000010

position:354941:-1
position: 354941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353565-354941:-1:exon

SOPEG_RS29050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: wzyE
locus tag: SOPEG_RS29050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412181.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0009246 - enterobacterial common antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ECA oligosaccharide polymerase
translation: MTLAQFGGLLVVYLLSLALVLSLIYQEFRRVRFNFNVFFSVLYLLTFYLGFPFTCLLVYRYGVEVVPVENLLESLLAATAFYGIYYVSYRTRLFARPRGPRPPWFSISRTEIHLLWLLLALIAVATVMVFFIHNGFLLFRLHAYSQIFSSDVYGVALKRFFYFFIPAMLLIYFLNPTRRSWIIFLIATVAFGIFTYIVVGGTRANIIIAFALFLFIGIQRGWITLWMLAGAGVVAIAGMFWLALKRYGLNVSGDEAFYTFLYLTRDTFSPWENLALLLQNYGHIDFQGLAPIVRDFYVFIPGWLWPDRPSLVLNTANYFTWEVLNNHSGLAISPTLIGSLIVMGGVGFIPLGAIVVGLIIKGFDTLYERGTAAGDRYRASFLQSFCFGAVFNMIVLAREGLDAFVSRVVFFCQVFGLCLIAAKLLFLLFRHAELIRPRSARLNGHPPCRNRLPPMGRI
SIO_010081: SOPEG_RS29050
subclass of: SO_0000673
so part of: SOPEG_RS29050
location: complement(353565..354941)
location: region:353565-354941:-1
so has part: feature:353565-354941:-1:exon

WP_025244105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:353565-354941:-1:exon

SOPEG_RS29055
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS29055
pseudo: true
so part of: sequence
location: complement(<355008..356024)
location: region:355008-356024:-1
so has part: feature:355008-356024:-1:exon
subclass of: SO_0000010

position:355008:-1
position: 355008
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:356024:-1
position: 356024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355008-356024:-1:exon

SOPEG_RS29055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS29055
inference: COORDINATES: protein motif:HMM:NF002753.0
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase
SIO_010081: SOPEG_RS29055
subclass of: SO_0000673
so part of: SOPEG_RS29055
location: complement(<355008..356024)
location: region:355008-356024:-1
so has part: feature:355008-356024:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355008-356024:-1:exon

SOPEG_RS01915
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: wzxE
locus tag: SOPEG_RS01915
old locus tag: SOPEG_0375
so part of: sequence
location: complement(356021..357271)
location: region:356021-357271:-1
so has part: feature:356021-357271:-1:exon
subclass of: SO_0000010

position:356021:-1
position: 356021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357271:-1
position: 357271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356021-357271:-1:exon

SOPEG_RS01915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: wzxE
locus tag: SOPEG_RS01915
old locus tag: SOPEG_0375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412183.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0009246 - enterobacterial common antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipid III flippase WzxE
translation: MSLANASVWTALSTLIKIGSGLLVVKVLAVAFGPDGVGQAGNFRQLVTVLGVLSGAGIFNGMTKLVAQHQHQPDRLRAALGTGSAMVLASSLLLAAVFVFAADPVSRALFGHERYRDAVVALAVIQLGIACANLGLAILKGYRDATGNALAISVGSLLGVAAFFVCYRLGGYAGALAGLALLPAMALLPVLFMLCYQRHLPLSFLLPAWDGGYAALLAKFTVMALITAVTLPVAYVMMRNLLARTEGWAAVGIWQGVSSISDSYLQFITASFTIYLLPTLSRLNDKRSVAREIARALRFVLPAVATVSLTLWLLRDVAIRLLFSAEFSAMSGLFAWQLVGDVLKVGAYVFGYLVVARAVLRVYLLAEISQFVLLTGFSHWLIPRHGALGATQAYMATYIVYFALCSGVFLLYLRKK
SIO_010081: SOPEG_RS01915
subclass of: SO_0000673
so part of: SOPEG_RS01915
location: complement(356021..357271)
location: region:356021-357271:-1
so has part: feature:356021-357271:-1:exon

WP_025244106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:356021-357271:-1:exon

SOPEG_RS01920
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
alternative label: fcnA
alternative label: wecE
gene: rffA
locus tag: SOPEG_RS01920
old locus tag: SOPEG_0376
gene synonym: fcnA; wecE
so part of: sequence
location: complement(357273..358394)
location: region:357273-358394:-1
so has part: feature:357273-358394:-1:exon
subclass of: SO_0000010

position:357273:-1
position: 357273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358394:-1
position: 358394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357273-358394:-1:exon

SOPEG_RS01920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
alternative label: fcnA
alternative label: wecE
gene: rffA
locus tag: SOPEG_RS01920
old locus tag: SOPEG_0376
gene synonym: fcnA; wecE
EC number: 2.6.1.59
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312751.1
GO function: GO:0019180 - dTDP-4-amino-4,6-dideoxygalactose transaminase activity [Evidence IEA]
GO process: GO:0009246 - enterobacterial common antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTDP-4-amino-4,6-dideoxygalactose transaminase
translation: MIPFNAPPVVGTELGFMQTAMGSGKLCGDGGFTQRCQHWLQQRFGSAKVLLTPSCTASLEMAAILLDIRPGDEVIMPSYTFVSTANAFVLRGATIVFVDIRQDTMNMDEALIEVAITPKTRAIVPVHYAGVACEMDTIMAIAERHRLWVVEDAAQGVMATYKGRALGTLGHIGCFSFHETKNYTAGGEGGATLINDAALVERAEIVREKGTNRSQFFRGQVDKYTWRDIGSSYLMADIQAAYLWAQLEAADIINQRRLALWHCYASALASLDGLTLPTVPATCLHNAHMFYVKLRDIDDRDGFIRHLKAADILSVFHYIPLHDSPAGRRFGRFHGSDRHTQRESQRLVRLPLFYNLSDDDQQRVIDAIYGYFN
SIO_010081: SOPEG_RS01920
subclass of: SO_0000673
so part of: SOPEG_RS01920
location: complement(357273..358394)
location: region:357273-358394:-1
so has part: feature:357273-358394:-1:exon

WP_025244107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357273-358394:-1:exon

SOPEG_RS01925
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
alternative label: wecD
gene: rffC
locus tag: SOPEG_RS01925
old locus tag: SOPEG_0377
gene synonym: wecD
so part of: sequence
location: complement(358381..359124)
location: region:358381-359124:-1
so has part: feature:358381-359124:-1:exon
subclass of: SO_0000010

position:358381:-1
position: 358381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359124:-1
position: 359124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358381-359124:-1:exon

SOPEG_RS01925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
alternative label: wecD
gene: rffC
locus tag: SOPEG_RS01925
old locus tag: SOPEG_0377
gene synonym: wecD
EC number: 2.3.1.210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012763847.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase
translation: MSARASIDLLAWESEFFGRRLGRVVFDDAAPRLTPSALTGFALVQAKVAAQATAQMDALSAIGFRPVEGEMDCCYTLPACAGGAPVAGAAALPAAEMRLAGEADISALRVLAAQTLVQSRFRAPWFSDEERQRFYAQWVENAVRGSFDHLCLVAQEPDDISGLVTLRDIGGHAARIGLLAVSPAARGRGTGKLLCRAALGWCRSRGFRQLWVATQTANLPALRLYLASGARVVHAAHWLYREPHDSI
SIO_010081: SOPEG_RS01925
subclass of: SO_0000673
so part of: SOPEG_RS01925
location: complement(358381..359124)
location: region:358381-359124:-1
so has part: feature:358381-359124:-1:exon

WP_025244108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:358381-359124:-1:exon

SOPEG_RS01930
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rfbA
locus tag: SOPEG_RS01930
old locus tag: SOPEG_0378
so part of: sequence
location: complement(359102..359983)
location: region:359102-359983:-1
so has part: feature:359102-359983:-1:exon
subclass of: SO_0000010

position:359102:-1
position: 359102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359983:-1
position: 359983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359102-359983:-1:exon

SOPEG_RS01930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rfbA
locus tag: SOPEG_RS01930
old locus tag: SOPEG_0378
EC number: 2.7.7.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004957327.1
GO function: GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucose-1-phosphate thymidylyltransferase RfbA
translation: MKGIVLAGGSGSRLYPITRGISKQLLPVYDKPMIYYPLSVLMLAGIRDILIITTPEEMPLFKRLLGAGEAFGIRLTYAAQPSSEGIAQAFLIGESFIGDDRCCLVLGDNIYFGQGFSPKLRQVAAREQGATLFAYQVMDPERFGVVAFDDDFRAVALEEKPAHPRSRWAVTGLYFYDRQVVEFARRVTPSARGELEITSINQMYLEQGGLHVELLGRGFAWLDTGTHDSLIEASTFVQTVEKRQGFKIACLEEIGWRNGWLDDDGARRAAQALAKTGYGQYLMDLLHVRPRQY
SIO_010081: SOPEG_RS01930
subclass of: SO_0000673
so part of: SOPEG_RS01930
location: complement(359102..359983)
location: region:359102-359983:-1
so has part: feature:359102-359983:-1:exon

WP_025244109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:359102-359983:-1:exon

SOPEG_RS01935
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rfbB
locus tag: SOPEG_RS01935
old locus tag: SOPEG_0379
so part of: sequence
location: complement(359998..361071)
location: region:359998-361071:-1
so has part: feature:359998-361071:-1:exon
subclass of: SO_0000010

position:359998:-1
position: 359998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361071:-1
position: 361071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359998-361071:-1:exon

SOPEG_RS01935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rfbB
locus tag: SOPEG_RS01935
old locus tag: SOPEG_0379
EC number: 4.2.1.46
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412187.1
GO function: GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTDP-glucose 4,6-dehydratase
translation: MRCLLITGGAGFIGSALVRYILGATADRVLVVDKLTYAGNLDSLAPVADHPHYRFARADIGDGPTMAQLLAEFQPDAIMHLAAESHVDRSIDGPAAFIDTNITGTSILLEAARGYWQTLPTAARAAFRFHHVSTDEVYGDLPNDGSQFNESSPYAPSSPYSASKAASDHLARAWMRTYGLPVLVTNCSNNYGPYHFPEKLIPLMIINALAGKPLPVYGDGGQIRDWLYVEDHARALYQVVTRGRPGETYVIGGHNERRNIDVVEALCGLLEQAGAPHPPGVVAFRQLITQVEDRPGHDRRYAIDAGKIARELGWRPQETFDSGMAKTVQWYLTHHEWWQRVLDGSYRGERLGLGPGQ
SIO_010081: SOPEG_RS01935
subclass of: SO_0000673
so part of: SOPEG_RS01935
location: complement(359998..361071)
location: region:359998-361071:-1
so has part: feature:359998-361071:-1:exon

WP_025244110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:359998-361071:-1:exon

SOPEG_RS01940
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: wecC
locus tag: SOPEG_RS01940
old locus tag: SOPEG_0380
so part of: sequence
location: complement(361068..362330)
location: region:361068-362330:-1
so has part: feature:361068-362330:-1:exon
subclass of: SO_0000010

position:361068:-1
position: 361068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362330:-1
position: 362330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361068-362330:-1:exon

SOPEG_RS01940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: wecC
locus tag: SOPEG_RS01940
old locus tag: SOPEG_0380
EC number: 1.1.1.336
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014172152.1
GO function: GO:0051287 - NAD binding [Evidence IEA]; GO:0089714 - UDP-N-acetyl-D-mannosamine dehydrogenase activity [Evidence IEA]
GO process: GO:0009246 - enterobacterial common antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetyl-D-mannosamine dehydrogenase
translation: MNFDTISVIGLGYIGLPTAAAFASRRKRVIGVDTNQYAVDTINRGAIHIIEPDLDRVVTDAVRQGLLRAVSQPQPADAFLIAVPTPFQDDHEPDLSYVKAAALSLVPVLEPGCLVILESTSPVGTTEQMAGWLAAARPDLTFPHQAGEAADINIAYCPERVLPGKIMVELIKNDRVIGGMTPRCSARAAELYRIFLEGECVVTNARTAEMCKLTENSFRDVNIAFANELSVICAEQQINVWELIALANRHPRVNILQPGPGVGGHCIAVDPWFIVAQNPAPARLIRTARQVNDDKPDWVVEKVKAAVADCLNDSGRGSSDVTIACFGLAFKPDIDDLRESPALHVTELIARWHRGQTLAVEPNVDALPASLDGLVTLADRDQALATADVLVMLVDHRQFRALAPSAIRQRWVVDTRGVWR
SIO_010081: SOPEG_RS01940
subclass of: SO_0000673
so part of: SOPEG_RS01940
location: complement(361068..362330)
location: region:361068-362330:-1
so has part: feature:361068-362330:-1:exon

WP_025244111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361068-362330:-1:exon

SOPEG_RS01945
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: wecB
locus tag: SOPEG_RS01945
old locus tag: SOPEG_0381
so part of: sequence
location: complement(362335..363459)
location: region:362335-363459:-1
so has part: feature:362335-363459:-1:exon
subclass of: SO_0000010

position:362335:-1
position: 362335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363459:-1
position: 363459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362335-363459:-1:exon

SOPEG_RS01945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: wecB
locus tag: SOPEG_RS01945
old locus tag: SOPEG_0381
EC number: 5.1.3.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412189.1
GO function: GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
GO process: GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
translation: MKVLVVFGTRPEAIKMAPLVLALAADPAFETRVCVTAQHREMLDQVLRLFAIVPDYDLDIMRPAQGLGEITSRILTGMQPVLDDFRPDVVLVHGDTTTTLAASLAAFYQHIPVGHVEAGLRTGDLSSPWPEEANRKLTGHLARWHFAPTDNARANLLAEGLPAARIAVTGNTVIDALFWVWDRVMSNAGLRASLDERYAFLDGVQKMILVTGHRRESFGDGFKRICAALARIALDHPDVQVVYPVHLNPNVSEPVNRMLSGIANIKLIDPQDYLPFVYLMNRATIILTDSGGIQEEAPSLGKAVLVMRDTTERPEAVAAGTVRLVGTDEQAIHQAVSQLLNDAQAYQRMSRAHNPYGDGHACERIITVLKKDSR
SIO_010081: SOPEG_RS01945
subclass of: SO_0000673
so part of: SOPEG_RS01945
location: complement(362335..363459)
location: region:362335-363459:-1
so has part: feature:362335-363459:-1:exon

WP_025244112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362335-363459:-1:exon

SOPEG_RS01950
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: wzzE
locus tag: SOPEG_RS01950
old locus tag: SOPEG_0382
so part of: sequence
location: complement(363566..364618)
location: region:363566-364618:-1
so has part: feature:363566-364618:-1:exon
subclass of: SO_0000010

position:363566:-1
position: 363566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364618:-1
position: 364618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363566-364618:-1:exon

SOPEG_RS01950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: wzzE
locus tag: SOPEG_RS01950
old locus tag: SOPEG_0382
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412190.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0009246 - enterobacterial common antigen biosynthetic process [Evidence IEA]; GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ECA polysaccharide chain length modulation protein
translation: MTPASSPSSAGRGQAIDNELDLRGLLCVLWRGKVTVIAYALAFALGALIYSFVARQEWTAIAITDKPTMNVQGGYFSQQQFLRNLDVKNTALPTSDTPSIADEAYQEFLRQLASYDTRWDFWLASPYYQTRKKGDAHADAVLLDELINAIQFLPRDEVKKLPDSARLVAETAPDANQLLRRYVDFANQRAANHLNEDVMAAWAARTVSLKAQVKRQEAVAAAVYQREQQQLNQALKLALTQGIDRSRTDVAAENLPQSEMFLLGHPLLQARLDALQAAGPAYDTDYDQNRAMLTTLNVGPVLNKSFKTYRYLRTPEEPVKRDKPRRLFLLVLWGAVGMLLGAGVALARRR
SIO_010081: SOPEG_RS01950
subclass of: SO_0000673
so part of: SOPEG_RS01950
location: complement(363566..364618)
location: region:363566-364618:-1
so has part: feature:363566-364618:-1:exon

WP_025244113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363566-364618:-1:exon

SOPEG_RS01955
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: wecA
locus tag: SOPEG_RS01955
old locus tag: SOPEG_0383
so part of: sequence
location: complement(364638..365732)
location: region:364638-365732:-1
so has part: feature:364638-365732:-1:exon
subclass of: SO_0000010

position:364638:-1
position: 364638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365732:-1
position: 365732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364638-365732:-1:exon

SOPEG_RS01955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: wecA
locus tag: SOPEG_RS01955
old locus tag: SOPEG_0383
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011095681.1
GO function: GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
GO process: GO:0009246 - enterobacterial common antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase
translation: MNILNMSTDFVAIFLFSLLFLFLARKVAKKIGLVDKPNYRKRHQGQIPLVGGISIYAGICFAFLYTDHYIPHVSLYLMCAGVLVVTGALDDRFDISVVARAIIQALVAVAMMVFSGRYIINSLGYIFGPWEMVLGPFGYLVTLFAVWAAINAFNMVDGIDGLLGGLSCVSLGAMGILLTLDNNPGLALWCFAMIAAILPYILLNLGVFGRRYKVFMGDAGSTMIGFTIIWLLLQSTQGWGHPMNPVTALWIIAVPLMDMIAIMYRRMRKGMSPFAPDRQHIHHLIMRAGFSSRQAFIIITLTAALLAFFGVAGERWLRWPESVMLLLWIGVFLLYGYVLKCAWRVARFVKRTKRRLSHYKKTPP
SIO_010081: SOPEG_RS01955
subclass of: SO_0000673
so part of: SOPEG_RS01955
location: complement(364638..365732)
location: region:364638-365732:-1
so has part: feature:364638-365732:-1:exon

WP_025244114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:364638-365732:-1:exon

SOPEG_RS28150
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS28150
so part of: sequence
location: 365767..365982
location: region:365767-365982:1
so has part: feature:365767-365982:1:exon
subclass of: SO_0000010

position:365767:1
position: 365767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365982:1
position: 365982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365767-365982:1:exon

SOPEG_RS28150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS28150
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRHHGLRLNSDALLVTEFCDNEIGFLLSLYVPPESPSGVQIGSKSPGQAQTRVTGHTKDVTILALEKKNAT
SIO_010081: SOPEG_RS28150
subclass of: SO_0000673
so part of: SOPEG_RS28150
location: 365767..365982
location: region:365767-365982:1
so has part: feature:365767-365982:1:exon

WP_158382314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:365767-365982:1:exon

SOPEG_RS01960
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rho
locus tag: SOPEG_RS01960
old locus tag: SOPEG_0384
so part of: sequence
location: complement(366012..367271)
location: region:366012-367271:-1
so has part: feature:366012-367271:-1:exon
subclass of: SO_0000010

position:366012:-1
position: 366012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367271:-1
position: 367271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366012-367271:-1:exon

SOPEG_RS01960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rho
locus tag: SOPEG_RS01960
old locus tag: SOPEG_0384
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1
GO function: GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination factor Rho
translation: MNLTELKNTPVSELVTLGENMGLENLARMRKQDIIFDILKQHAKSGEDIFGDGVLEILQDGFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVNYDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRFFGAARNMEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLMNKLAMTKTNDEFFDMMKRS
SIO_010081: SOPEG_RS01960
subclass of: SO_0000673
so part of: SOPEG_RS01960
location: complement(366012..367271)
location: region:366012-367271:-1
so has part: feature:366012-367271:-1:exon

WP_025244115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:366012-367271:-1:exon

SOPEG_RS01965
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: trxA
locus tag: SOPEG_RS01965
old locus tag: SOPEG_0385
so part of: sequence
location: complement(367663..367989)
location: region:367663-367989:-1
so has part: feature:367663-367989:-1:exon
subclass of: SO_0000010

position:367663:-1
position: 367663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367989:-1
position: 367989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367663-367989:-1:exon

SOPEG_RS01965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: trxA
locus tag: SOPEG_RS01965
old locus tag: SOPEG_0385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011906449.1
GO function: GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
GO process: GO:0006662 - glycerol ether metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin TrxA
translation: MSDKIIHLSDDSFEKDVLQAKGLFLVDFWAEWCGPCKMIAPILAEIADEFDGKLTIAKLNIDENPATAPKYGIRGIPTLLLFRDGEVVATKVGALSKGQLKEFLNANL
SIO_010081: SOPEG_RS01965
subclass of: SO_0000673
so part of: SOPEG_RS01965
location: complement(367663..367989)
location: region:367663-367989:-1
so has part: feature:367663-367989:-1:exon

WP_025244116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367663-367989:-1:exon

SOPEG_RS01970
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rhlB
locus tag: SOPEG_RS01970
old locus tag: SOPEG_0386
so part of: sequence
location: 368107..369375
location: region:368107-369375:1
so has part: feature:368107-369375:1:exon
subclass of: SO_0000010

position:368107:1
position: 368107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369375:1
position: 369375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368107-369375:1:exon

SOPEG_RS01970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rhlB
locus tag: SOPEG_RS01970
old locus tag: SOPEG_0386
EC number: 3.6.4.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002228177.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003724 - RNA helicase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent RNA helicase RhlB
translation: MSKTHLTEKKFSDFALHPLIVESLDSKGVNNCTPIQALTLPITLAGKDVAGQAQTGTGKTLAFLTATFHHLLTHPAAEGRQTNQPRALIMAPTRELAVQIHSDAEPLAQATGLKMGLAYGGDGYDKQLNVLEAGVDILVGTTGRLIDYTKQNYVNMGAIQVVVLDEADRMFDLGFIKDICWLFRRMPAAAERLNMLFSATLSYRVRELAFEHMNNAEYVEVEPLQKTGHRIQEELFYPSNEEKMRLLQTLVEEEWPDRCIIFANTKHRCEDIWGHLAADGHRVGLLTGDVSQKRRLRILEEFTQGALDILVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGESGCSISLACEEYALNLTAIESYIGHQIPVSKYNSDALLTDLPAPKRLTRPRTGSGPRRSGAPLHNRKRPG
SIO_010081: SOPEG_RS01970
subclass of: SO_0000673
so part of: SOPEG_RS01970
location: 368107..369375
location: region:368107-369375:1
so has part: feature:368107-369375:1:exon

WP_025244117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:368107-369375:1:exon

SOPEG_RS01975
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: gppA
locus tag: SOPEG_RS01975
old locus tag: SOPEG_0387
so part of: sequence
location: 369382..370881
location: region:369382-370881:1
so has part: feature:369382-370881:1:exon
subclass of: SO_0000010

position:369382:1
position: 369382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370881:1
position: 370881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369382-370881:1:exon

SOPEG_RS01975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: gppA
locus tag: SOPEG_RS01975
old locus tag: SOPEG_0387
EC number: 3.6.1.40
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017492507.1
GO function: GO:0008894 - guanosine-5'-triphosphate,3'-diphosphate diphosphatase activity [Evidence IEA]
GO process: GO:0015974 - guanosine pentaphosphate catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: guanosine-5'-triphosphate,3'-diphosphate diphosphatase
translation: MISASSLYAAIDLGSNSFHMLVVREVAGTVQMLARIKRKVRLAAGLNGDNRLSSDAMQRGWQCLRLFAEHLQDIPPAHVRVVTTATLRLATNAAEFLGPASDILGCPVQVISGEEEARLIYQGVAHTTGGSDERLVVDIGGGSTELVVGRGAQALELFSLEMGCVTWLERYFNDRSLTRENFERAEQAAREKIRPVAFRLLARGWQVCVGASGTVQALQEIMVAQGMDEHITLSKLLQLKQRVIHCGKLEELEIEGLTLDRALVFPSGLAILLAVFAELGIKTMTLAGGALREGMMYGMMALPAGGDIRQHTLENLQHRYQLDTEQAQRVARLAEGFARQVAETWQLDERCFTLLRCASMIHEIGLSIDIKRAPHHAAYLVRHTDLPGFTPAQQKLIATLLQNQSNHIDLTQLNDQNSLPLRIAQRLCRLMRLAIIFASRRRDDALPAVELRAMDETLHVLLPHDWLNQHPLRAEYLEQESQWQSYVHWPLLLEEAPQS
SIO_010081: SOPEG_RS01975
subclass of: SO_0000673
so part of: SOPEG_RS01975
location: 369382..370881
location: region:369382-370881:1
so has part: feature:369382-370881:1:exon

WP_025244118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:369382-370881:1:exon

SOPEG_RS01980
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rep
locus tag: SOPEG_RS01980
old locus tag: SOPEG_0388
so part of: sequence
location: complement(370942..372969)
location: region:370942-372969:-1
so has part: feature:370942-372969:-1:exon
subclass of: SO_0000010

position:370942:-1
position: 370942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372969:-1
position: 372969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370942-372969:-1:exon

SOPEG_RS01980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rep
locus tag: SOPEG_RS01980
old locus tag: SOPEG_0388
EC number: 3.6.4.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015842109.1
GO function: GO:0003678 - DNA helicase activity [Evidence IEA]
GO process: GO:0006268 - DNA unwinding involved in DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA helicase Rep
translation: MRLNPSQQQAVEFVTGSCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKASREMKERVAQTLGRAEARGLTVATFHTLGLAIIKREYKALGMKAKFSLFDEQDQLALLKDLTEPWLEGDKDLLNQLTAAISNWKNDLLSPPQAAVAARSERDKLFAHCYELYDNHLVACNVLDFDDLILRPTKLLQRDEAVRECWQNRLRYLLVDEYQDTNTSQYELVKLLVGPRGRFTVVGDDDQSIYSWRGARPQNLALLQQDFPTLAVIKLEQNYRSTERILNAANILIANNPHVFEKKLFSRLGYGEILKVITANNEDHEAERVVRELIAHHFINKTRYRDYAILYRGNHQSRLFEKMLMQNRIPYRISGGTSFFSRPEIKDLLAYLRVLTNPDDDSAFLRMVNTPRREIGAATLAKLGTWATQRDKSLFTASFDLGLEQTLSGRGLESLQQFTRWLEGIARQAEREPVAAVRELIHGIDYESWLYESSPGPRAAEMRMKNVNQLFSWMTEMLTGSDLNEAMTLDQVVTRFTLRDMMERGESEEELDQVQLMTLHASKGLEFPYVFLVGMEEGLLPHQSSIAENNIDEERRLAYVGITRAQKELTFTLCRERRQYGELVKPEPSRFLLELPQDDLAWEQVRKPVSAEERMSRGQGHLASLRAQLAKARGEGG
SIO_010081: SOPEG_RS01980
subclass of: SO_0000673
so part of: SOPEG_RS01980
location: complement(370942..372969)
location: region:370942-372969:-1
so has part: feature:370942-372969:-1:exon

WP_025244119.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:370942-372969:-1:exon

SOPEG_RS01985
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: ilvC
locus tag: SOPEG_RS01985
old locus tag: SOPEG_0389
so part of: sequence
location: complement(373191..374669)
location: region:373191-374669:-1
so has part: feature:373191-374669:-1:exon
subclass of: SO_0000010

position:373191:-1
position: 373191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374669:-1
position: 374669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373191-374669:-1:exon

SOPEG_RS01985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: ilvC
locus tag: SOPEG_RS01985
old locus tag: SOPEG_0389
EC number: 1.1.1.86
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012907949.1
GO function: GO:0004455 - ketol-acid reductoisomerase activity [Evidence IEA]
GO process: GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ketol-acid reductoisomerase
translation: MANYFNTLNLRQQLAQLGKCRFMSRDEFVDEAGYLQGKKVVIIGCGAQGLNQGLNMRDSGLDIAYALRKEAIAEKRPSWRKATENGFRVGTYEELVPEADLVVNLTPDKQHSAVVQAVQPLMKQDAALGYSHGFNIVEVGEQIRRDITVIMVAPKCPGTEVREEYKRGFGVPTLIAVHPENDPKGEGMALAKAWAAATGGHRAGVLESSFVAEVKSDLMGEQTILCGMLQAGSLLCFDKMVADGVDPAYAGKLIQFGWETTTEALKQGGITLMMDRLSNSAKLRAFALSEQLKQLMQPLFEKHMDDIITGAFSSGMMADWANDDVKLLGWREETGRTPFENAPQYDGKISEQTYFDHGVLMIAMAKAGVELAFETMTRSGIIAESAYYESLHELPLIANTVARKRLYEMNVVISDTAEYGNYLFANAAVPLLKEAFMGNLQAGDLGKPVAEGEIDNACLRDVNEAIRQHPIEIVGAELRGYMKDMKRIAVAN
SIO_010081: SOPEG_RS01985
subclass of: SO_0000673
so part of: SOPEG_RS01985
location: complement(373191..374669)
location: region:373191-374669:-1
so has part: feature:373191-374669:-1:exon

WP_025244120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373191-374669:-1:exon

SOPEG_RS01990
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: ilvY
locus tag: SOPEG_RS01990
old locus tag: SOPEG_0390
so part of: sequence
location: 374865..375752
location: region:374865-375752:1
so has part: feature:374865-375752:1:exon
subclass of: SO_0000010

position:374865:1
position: 374865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375752:1
position: 375752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374865-375752:1:exon

SOPEG_RS01990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: ilvY
locus tag: SOPEG_RS01990
old locus tag: SOPEG_0390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011412198.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HTH-type transcriptional activator IlvY
translation: MDIRDLKLFLHLAESRHFGHSAKAMHVSPSTLSRQIQRLEEDVGQTLFLRDNRTVQLTDAGQQLKEFAQQTLLQYQQLRHRLGQHGPSLSGELRLFCSVTAAYSHLPPILDLFRAEHPLVEIKLTTGDAANALDKVQSGEADLGIAGHPEILPASIDFTPIGEIPMILIAPALPCPVRARVKTPQPDWSNTPFILPDHGPARRRIELWFRSNHISNPLIYATVAGNEAIVSMVALGCGIALIPSVVMDNSPEPVRSRITLLEHGTPVAPLALGVCAQRKRLQESLIDAFWQLLER
SIO_010081: SOPEG_RS01990
subclass of: SO_0000673
so part of: SOPEG_RS01990
location: 374865..375752
location: region:374865-375752:1
so has part: feature:374865-375752:1:exon

WP_025244121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:374865-375752:1:exon

SOPEG_RS28575
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS28575
so part of: sequence
location: complement(375637..375999)
location: region:375637-375999:-1
so has part: feature:375637-375999:-1:exon
subclass of: SO_0000010

position:375637:-1
position: 375637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375999:-1
position: 375999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375637-375999:-1:exon

SOPEG_RS28575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS28575
inference: COORDINATES: protein motif:HMM:NF012794.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKFLYTLGTRWNITLFHYRSHGTDYGRVLAGFELAEREPEFDHHLSALGYECHDVTANPAFRLFLADLPPCSPGRIGRQAAVSAPAVARRRRSATLVAAFVVHRLPAPTARPGCRAPAG
SIO_010081: SOPEG_RS28575
subclass of: SO_0000673
so part of: SOPEG_RS28575
location: complement(375637..375999)
location: region:375637-375999:-1
so has part: feature:375637-375999:-1:exon

WP_200867851.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:375637-375999:-1:exon

SOPEG_RS28580
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS28580
old locus tag: SOPEG_ps0391
so part of: sequence
location: complement(375899..376702)
location: region:375899-376702:-1
so has part: feature:375899-376702:-1:exon
subclass of: SO_0000010

position:375899:-1
position: 375899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376702:-1
position: 376702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375899-376702:-1:exon

SOPEG_RS28580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS28580
old locus tag: SOPEG_ps0391
inference: COORDINATES: protein motif:HMM:NF012512.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyridoxal-phosphate dependent enzyme
translation: MPVGGGGLAAALRAGEPVDLPRVGLFAEGVAVRRIGNETFRLCRDYLDDVITVDSDAICTAVKDLFEDVRAIAEPSGALALAGMKKYVQLHGIHDERLAHVLSGANVNFHGLRYVSERCELGEQREALMAVTIPERKGSFLAFCELLGGRPVTEFNYRYSDADNACIFVGVRLTRGREEREEILAEMAAGGYQVADLSDDEMAKLHVRYMVGGRPSKPLRERLYSFEFPESPRSVAKIFVHAGHALEYYAVSLPQPRHGLWPGAGGI
SIO_010081: SOPEG_RS28580
subclass of: SO_0000673
so part of: SOPEG_RS28580
location: complement(375899..376702)
location: region:375899-376702:-1
so has part: feature:375899-376702:-1:exon

WP_071882112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:375899-376702:-1:exon

SOPEG_RS28585
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: ilvD
locus tag: SOPEG_RS28585
old locus tag: SOPEG_ps0392
pseudo: true
so part of: sequence
location: complement(<376922..378568)
location: region:376922-378568:-1
so has part: feature:376922-378568:-1:exon
subclass of: SO_0000010

position:376922:-1
position: 376922
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:378568:-1
position: 378568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376922-378568:-1:exon

SOPEG_RS28585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: ilvD
locus tag: SOPEG_RS28585
old locus tag: SOPEG_ps0392
inference: COORDINATES: similar to AA sequence:RefSeq:NP_709576.1
GO function: GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
GO process: GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: dihydroxy-acid dehydratase
SIO_010081: SOPEG_RS28585
subclass of: SO_0000673
so part of: SOPEG_RS28585
location: complement(<376922..378568)
location: region:376922-378568:-1
so has part: feature:376922-378568:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:376922-378568:-1:exon

SOPEG_RS02005
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02005
old locus tag: SOPEG_0393
so part of: sequence
location: complement(378634..379572)
location: region:378634-379572:-1
so has part: feature:378634-379572:-1:exon
subclass of: SO_0000010

position:378634:-1
position: 378634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379572:-1
position: 379572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378634-379572:-1:exon

SOPEG_RS02005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02005
old locus tag: SOPEG_0393
EC number: 2.6.1.42
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312731.1
GO function: GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO process: GO:0009081 - branched-chain amino acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid transaminase
translation: MTTKKADFIWFNGEMVPWAEAKVHVMSHALHYGSSVFEGVRCYDSHKGPVVFRHREHMQRLHNSAKIYRMPVTQSVDELMAATRAVILKNKLVSAYIRPLVFVGDVGDVGMGVNPPAGYTTDVIIAAFPWGAYLGEEALDQGIDAMVSSWNRAAANTIPTAAKAGGNYLSSMLVGSEARRHGYQEGIALDVHGYVSEGAGENLFEVKDGILFTPPFTSSALPGITRDAIIKLAVTAGLEVREQVLSRESLYLADEVFMSGTAAEITPVRSVDGIKVGIGKCGPVTKQLQQAFFGLFTGETEDKWGWLDSVNQ
SIO_010081: SOPEG_RS02005
subclass of: SO_0000673
so part of: SOPEG_RS02005
location: complement(378634..379572)
location: region:378634-379572:-1
so has part: feature:378634-379572:-1:exon

WP_025244122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:378634-379572:-1:exon

SOPEG_RS02010
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: ilvM
locus tag: SOPEG_RS02010
old locus tag: SOPEG_0394
so part of: sequence
location: complement(379595..379852)
location: region:379595-379852:-1
so has part: feature:379595-379852:-1:exon
subclass of: SO_0000010

position:379595:-1
position: 379595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379852:-1
position: 379852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379595-379852:-1:exon

SOPEG_RS02010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: ilvM
locus tag: SOPEG_RS02010
old locus tag: SOPEG_0394
EC number: 2.2.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002212016.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetolactate synthase 2 small subunit
translation: MMQHSLSIQAHFRPEVVERILRVVRHRGFELCALNMTPRTEAEGINIHLTFASKRSVDLLSAQLSKLMDVACVEIQQLTSQQIRA
SIO_010081: SOPEG_RS02010
subclass of: SO_0000673
so part of: SOPEG_RS02010
location: complement(379595..379852)
location: region:379595-379852:-1
so has part: feature:379595-379852:-1:exon

WP_025244123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379595-379852:-1:exon

SOPEG_RS02015
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02015
old locus tag: SOPEG_ps0395
so part of: sequence
location: complement(379849..381342)
location: region:379849-381342:-1
so has part: feature:379849-381342:-1:exon
subclass of: SO_0000010

position:379849:-1
position: 379849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381342:-1
position: 381342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379849-381342:-1:exon

SOPEG_RS02015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02015
old locus tag: SOPEG_ps0395
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005224414.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetolactate synthase 2 catalytic subunit
translation: MNGAQWVVQALRAQGVDMVFGYPSGAIMPVYDALYDGGVEHLLCRHEQGAAIAAIGYARATGKVGVCIATSGPGATNLITGLADALLDSVPVVAITGQVGSAFIGTDAFQEIDVLGLSLACTKHSFLVESLDALPGIITEAFAIATSGRPGPVLIDIPKDIQLADGDLTPHLLSLDDQAGSIQGDLEGDDACYLGMLGMHGNQAANLAVQACDLLIAVGARFDDRVTGRLNAFAPQAKVIHLDIDPAELGKLRQAHIALLGDLNHLLPALAQPMSIDAWRVETQVLKAEYHWRYDHPGEGIYAPALLRAISDRAPDDAIVTTDVGQHQMWAAQHMRFSRPKNFITSSGLGMMGFGIPAAIGAQIARPQDTVICVSGDGSFMMNVQELTTIKRKRLPLKIVLLDNQRLGMVRQWQQLFFDKRYSETTLTDNPDFLTLASAFDIPGLHITRKDHIPQALETLFTQPGPFLLHVSIDELENVWPLVPPGAGNETMLEKSS
SIO_010081: SOPEG_RS02015
subclass of: SO_0000673
so part of: SOPEG_RS02015
location: complement(379849..381342)
location: region:379849-381342:-1
so has part: feature:379849-381342:-1:exon

WP_025244124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379849-381342:-1:exon

SOPEG_RS23830
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: ilvL
locus tag: SOPEG_RS23830
so part of: sequence
location: complement(381479..381580)
location: region:381479-381580:-1
so has part: feature:381479-381580:-1:exon
subclass of: SO_0000010

position:381479:-1
position: 381479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381580:-1
position: 381580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381479-381580:-1:exon

SOPEG_RS23830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: ilvL
locus tag: SOPEG_RS23830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015699153.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ilv operon leader peptide
translation: MKAVVQVISLVVISVVVIIIPPCGAALGRRKAY
SIO_010081: SOPEG_RS23830
subclass of: SO_0000673
so part of: SOPEG_RS23830
location: complement(381479..381580)
location: region:381479-381580:-1
so has part: feature:381479-381580:-1:exon

WP_011412204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381479-381580:-1:exon

SOPEG_RS02020
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02020
old locus tag: SOPEG_0396
so part of: sequence
location: 382228..383436
location: region:382228-383436:1
so has part: feature:382228-383436:1:exon
subclass of: SO_0000010

position:382228:1
position: 382228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383436:1
position: 383436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382228-383436:1:exon

SOPEG_RS02020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02020
old locus tag: SOPEG_0396
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256-like element ISSoEn2 family transposase
translation: MDEKQLQALANELAKNLKTPEDLSHFDRLLKKISVEAALNAEMTHHLGYDKNQPKPGTNARNGYSTKTVTTGDGPLALRTPRDRDGSFEPQLVKKNQTRITGMDNQILSLYAKGMTTREIAAAFKELYDADVSPALVSKVTDAVMEQVVEWQNRPLDAVYPIVYLDCIVLKVRQDSRIINKSVFLALGIIIEGQKELLGMWLAENEGAKFWLNVLTELKNRGLNDILIACVDGLKGFPDAINAVYPEARLQLCIVHMVRNSLRFVSWKDYKVVTRDLKAIYQAPTEEAGLQALEAFSSAWDIRYPQISRSWQANWANLATFFAYPTDIRKVIYTTNAIESLNSVIRHAIKKRKVFPTDDAVKKVVWLAIQAASQKWTMPLRDWRMAMSRFIIEFGDRLDGHF
SIO_010081: SOPEG_RS02020
subclass of: SO_0000673
so part of: SOPEG_RS02020
location: 382228..383436
location: region:382228-383436:1
so has part: feature:382228-383436:1:exon

WP_025244125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382228-383436:1:exon

SOPEG_RS23835
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS23835
old locus tag: SOPEG_ps0397
pseudo: true
so part of: sequence
location: 383517..>383780
location: region:383517-383780:1
so has part: feature:383517-383780:1:exon
subclass of: SO_0000010

position:383517:1
position: 383517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383780:1
position: 383780
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383517-383780:1:exon

SOPEG_RS23835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS23835
old locus tag: SOPEG_ps0397
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015461794.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: flagellin FliC
SIO_010081: SOPEG_RS23835
subclass of: SO_0000673
so part of: SOPEG_RS23835
location: 383517..>383780
location: region:383517-383780:1
so has part: feature:383517-383780:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:383517-383780:1:exon

SOPEG_RS22410
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS22410
old locus tag: SOPEG_ps0398
pseudo: true
so part of: sequence
location: complement(383837..384761)
location: region:383837-384761:-1
so has part: feature:383837-384761:-1:exon
subclass of: SO_0000010

position:383837:-1
position: 383837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384761:-1
position: 384761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383837-384761:-1:exon

SOPEG_RS22410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS22410
old locus tag: SOPEG_ps0398
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
SIO_010081: SOPEG_RS22410
subclass of: SO_0000673
so part of: SOPEG_RS22410
location: complement(383837..384761)
location: region:383837-384761:-1
so has part: feature:383837-384761:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:383837-384761:-1:exon

SOPEG_RS02035
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02035
old locus tag: SOPEG_0399
so part of: sequence
location: complement(385012..385935)
location: region:385012-385935:-1
so has part: feature:385012-385935:-1:exon
subclass of: SO_0000010

position:385012:-1
position: 385012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385935:-1
position: 385935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385012-385935:-1:exon

SOPEG_RS02035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02035
old locus tag: SOPEG_0399
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDLTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDSILRLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKIFGEGEWKVRQHGAERRRVWRKLHLAVDSATHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKILLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS02035
subclass of: SO_0000673
so part of: SOPEG_RS02035
location: complement(385012..385935)
location: region:385012-385935:-1
so has part: feature:385012-385935:-1:exon

WP_025244127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385012-385935:-1:exon

SOPEG_RS29060
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS29060
pseudo: true
so part of: sequence
location: <386012..>386186
location: region:386012-386186:1
so has part: feature:386012-386186:1:exon
subclass of: SO_0000010

position:386012:1
position: 386012
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:386186:1
position: 386186
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386012-386186:1:exon

SOPEG_RS29060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS29060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015461794.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: flagellin FliC
SIO_010081: SOPEG_RS29060
subclass of: SO_0000673
so part of: SOPEG_RS29060
location: <386012..>386186
location: region:386012-386186:1
so has part: feature:386012-386186:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:386012-386186:1:exon

SOPEG_RS02040
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02040
old locus tag: SOPEG_0401
so part of: sequence
location: 386314..387237
location: region:386314-387237:1
so has part: feature:386314-387237:1:exon
subclass of: SO_0000010

position:386314:1
position: 386314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387237:1
position: 387237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386314-387237:1:exon

SOPEG_RS02040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02040
old locus tag: SOPEG_0401
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDLTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDSIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKVFGEGEWKVRQHGAERRRVWRKLHLAVDSVTHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYYERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKTLLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS02040
subclass of: SO_0000673
so part of: SOPEG_RS02040
location: 386314..387237
location: region:386314-387237:1
so has part: feature:386314-387237:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:386314-387237:1:exon

SOPEG_RS28590
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS28590
pseudo: true
so part of: sequence
location: complement(387882..>388151)
location: region:387882-388151:-1
so has part: feature:387882-388151:-1:exon
subclass of: SO_0000010

position:387882:-1
position: 387882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388151:-1
position: 388151
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387882-388151:-1:exon

SOPEG_RS28590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS28590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017374776.1
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: flagellin
SIO_010081: SOPEG_RS28590
subclass of: SO_0000673
so part of: SOPEG_RS28590
location: complement(387882..>388151)
location: region:387882-388151:-1
so has part: feature:387882-388151:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:387882-388151:-1:exon

SOPEG_RS02045
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02045
old locus tag: SOPEG_ps0400
so part of: sequence
location: complement(388165..389175)
location: region:388165-389175:-1
so has part: feature:388165-389175:-1:exon
subclass of: SO_0000010

position:388165:-1
position: 388165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389175:-1
position: 389175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388165-389175:-1:exon

SOPEG_RS02045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02045
old locus tag: SOPEG_ps0400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007370648.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSQVIITNILSMAAQNNLNKSQASLGSAIQRLSSGWRINSAKDDAAGQAIANRFTSLINGLTQSSLNANDGISVAQTAEGAINEINENLHAIRRLTVQVKSTAMISEADKKSIQNEIGKRLDEIDRIAAQTEFNGVRILSKNQNLSIQVGANDGETVDIELKQLDTKELGIDTFSVVQVVKSSDIKTEQTDNVDNWAKPTIEFAGTAADKIDIDGKVYRKGLQYYVKKSGTEEYYKAQTGNSGAGNAKLTYTAAAATKVEADAAEGMAPSPQDVKTGTTSVTPPAGMTVHACEDKSVQSGYVLKGTDNGEPVYYSASIDAKGKGDPGRENRGERGG
SIO_010081: SOPEG_RS02045
subclass of: SO_0000673
so part of: SOPEG_RS02045
location: complement(388165..389175)
location: region:388165-389175:-1
so has part: feature:388165-389175:-1:exon

WP_081742902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:388165-389175:-1:exon

SOPEG_RS02050
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02050
old locus tag: SOPEG_ps0402
so part of: sequence
location: 389622..390170
location: region:389622-390170:1
so has part: feature:389622-390170:1:exon
subclass of: SO_0000010

position:389622:1
position: 389622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390170:1
position: 390170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389622-390170:1:exon

SOPEG_RS02050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02050
old locus tag: SOPEG_ps0402
inference: COORDINATES: protein motif:HMM:NF014518.2
GO component: GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar cap protein FliD N-terminal domain-containing protein
translation: MEGISISGIRDALMANQTKQFQLMLRPIQLRQKSIEWKISAWRKIRSSLQTLLEKSNALKNDAFYAMKISENKAFSARASRGAMAGTHDIKVNELAQNHTLSFQTKKGIDTPLGDNKPTRTLTISQKGENGEMKDIVITLAQEETSLAGIAKAINNQKAGVHAEVKNVDNDGTLRLVLRGLC
SIO_010081: SOPEG_RS02050
subclass of: SO_0000673
so part of: SOPEG_RS02050
location: 389622..390170
location: region:389622-390170:1
so has part: feature:389622-390170:1:exon

WP_025244128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:389622-390170:1:exon

SOPEG_RS02055
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02055
old locus tag: SOPEG_0403
so part of: sequence
location: 390235..391158
location: region:390235-391158:1
so has part: feature:390235-391158:1:exon
subclass of: SO_0000010

position:390235:1
position: 390235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391158:1
position: 391158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390235-391158:1:exon

SOPEG_RS02055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02055
old locus tag: SOPEG_0403
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDLTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDSIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKVFGEGEWKVRQHGAERRRVWRKLHLAVDSVTHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKTLLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS02055
subclass of: SO_0000673
so part of: SOPEG_RS02055
location: 390235..391158
location: region:390235-391158:1
so has part: feature:390235-391158:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:390235-391158:1:exon

SOPEG_RS23840
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS23840
so part of: sequence
location: complement(391441..391563)
location: region:391441-391563:-1
so has part: feature:391441-391563:-1:exon
subclass of: SO_0000010

position:391441:-1
position: 391441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391563:-1
position: 391563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391441-391563:-1:exon

SOPEG_RS23840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS23840
inference: COORDINATES: protein motif:HMM:NF014143.2
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO function: GO:0003774 - cytoskeletal motor activity [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook-basal body complex protein FliE
translation: MSDLFNKAVEMQKASLALHLGIQVNNKLINAYQEVMNMAI
SIO_010081: SOPEG_RS23840
subclass of: SO_0000673
so part of: SOPEG_RS23840
location: complement(391441..391563)
location: region:391441-391563:-1
so has part: feature:391441-391563:-1:exon

WP_257720375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391441-391563:-1:exon

SOPEG_RS02065
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02065
old locus tag: SOPEG_0405
so part of: sequence
location: complement(391596..392519)
location: region:391596-392519:-1
so has part: feature:391596-392519:-1:exon
subclass of: SO_0000010

position:391596:-1
position: 391596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392519:-1
position: 392519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391596-392519:-1:exon

SOPEG_RS02065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02065
old locus tag: SOPEG_0405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDMTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDAIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKVFGEGEWKVRQHGAERRRVWRKLHLAVDSATHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKTLLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS02065
subclass of: SO_0000673
so part of: SOPEG_RS02065
location: complement(391596..392519)
location: region:391596-392519:-1
so has part: feature:391596-392519:-1:exon

WP_025244129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391596-392519:-1:exon

SOPEG_RS02070
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02070
old locus tag: SOPEG_ps0404
so part of: sequence
location: complement(392581..392829)
location: region:392581-392829:-1
so has part: feature:392581-392829:-1:exon
subclass of: SO_0000010

position:392581:-1
position: 392581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392829:-1
position: 392829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392581-392829:-1:exon

SOPEG_RS02070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02070
old locus tag: SOPEG_ps0404
inference: COORDINATES: protein motif:HMM:NF014143.2
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO function: GO:0003774 - cytoskeletal motor activity [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook-basal body complex protein FliE
translation: MTTQAIHSVLAMMKVTAQQAAGTTITLSAPAVAGAGFISELNSSIKQINGMQINARRKAEKFELGVPGIALNDVMVEMGFVE
SIO_010081: SOPEG_RS02070
subclass of: SO_0000673
so part of: SOPEG_RS02070
location: complement(392581..392829)
location: region:392581-392829:-1
so has part: feature:392581-392829:-1:exon

WP_025244130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:392581-392829:-1:exon

SOPEG_RS02075
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: fliF
locus tag: SOPEG_RS02075
old locus tag: SOPEG_0406
so part of: sequence
location: 393087..394769
location: region:393087-394769:1
so has part: feature:393087-394769:1:exon
subclass of: SO_0000010

position:393087:1
position: 393087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394769:1
position: 394769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393087-394769:1:exon

SOPEG_RS02075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: fliF
locus tag: SOPEG_RS02075
old locus tag: SOPEG_0406
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409918.1
GO component: GO:0009431 - bacterial-type flagellum basal body, MS ring [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar basal-body MS-ring/collar protein FliF
translation: MDINAKSAISLTNLIARFRDHPKYTLLAAGAAGIALAIVLLLWARTPDYRILYSNISDQDGGAVVAELTTMNIPYRFAGNSGAIMVPSDRVHETRLLLAQKGLPKGGALGFELLDREKFGMSQFSEQINYQRALEGEIARTIETLNPVKSARVHIAMPKPSLFVREHKPATASVTLALYPGRALDAGQIQAITWLISGTVPDLPAGNITLVDSQGQLLAQPGNDELNLSTTQLAYTREVEGDYQRRISAILAPVIGAANVRAEVTAQLDFTAVEQTAEQHKPNGRPEEMAIRSQQLNASDQIGIQAPGGVPGALSNQPTPPATAPIESPANPAAGKKPAAKDGAPAPAAIAQPPRSSQNEKTINYEVDRTLTHSRFRPGVLKRLSVAVVVNDRKDSAGKPVRLTPQEMQDVTALVREAMGFSSERGDTLNIVNTRFVANQDMPPSLPFWQDPGLQAMAFSTMRYALVALLFWLAWRKGFRPLWQRQQEIERERIRAQYEANLPRDEPRPVSRSELEKETREKARQAMEDSIQQLRDIAAARPQMVARILRQWITREQQPS
SIO_010081: SOPEG_RS02075
subclass of: SO_0000673
so part of: SOPEG_RS02075
location: 393087..394769
location: region:393087-394769:1
so has part: feature:393087-394769:1:exon

WP_200867881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:393087-394769:1:exon

SOPEG_RS02080
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: fliG
locus tag: SOPEG_RS02080
old locus tag: SOPEG_0407
so part of: sequence
location: 394766..395755
location: region:394766-395755:1
so has part: feature:394766-395755:1:exon
subclass of: SO_0000010

position:394766:1
position: 394766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395755:1
position: 395755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394766-395755:1:exon

SOPEG_RS02080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: fliG
locus tag: SOPEG_RS02080
old locus tag: SOPEG_0407
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409917.1
GO component: GO:0009433 - bacterial-type flagellum basal body, C ring [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0006935 - chemotaxis [Evidence IEA]; GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar motor switch protein FliG
translation: MNAIEKSAIVMLTLGEETAAAVFKHLRKQEVEAIGKTIASLGIYSRQQLTSVLEAFHSDAETMISPDKDCYDYLRAALISALGEDRAQLLLEELHITGADDDKGIDALNAMKPQAVTALIQAEHPQVIAAILVLLKRNLAAEILSGFEETLRNDILVRIATLDGLQPAALQELTLALNDLLRGQRGRQGNKGGVRPAAEILNYMQSRQEEAAIDAVRALDESLAERIVEHMFTFDDLQDLDDRSLRRILQEIDADMLVIALKGCAPSLVDRILGNMSQRQAEILRDDLSLSAPVKESRVETERKAIMAVVRRLADADEIVINKDGENYV
SIO_010081: SOPEG_RS02080
subclass of: SO_0000673
so part of: SOPEG_RS02080
location: 394766..395755
location: region:394766-395755:1
so has part: feature:394766-395755:1:exon

WP_025244132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:394766-395755:1:exon

SOPEG_RS02085
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: fliH
locus tag: SOPEG_RS02085
old locus tag: SOPEG_0408
so part of: sequence
location: 395748..396461
location: region:395748-396461:1
so has part: feature:395748-396461:1:exon
subclass of: SO_0000010

position:395748:1
position: 395748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396461:1
position: 396461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395748-396461:1:exon

SOPEG_RS02085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: fliH
locus tag: SOPEG_RS02085
old locus tag: SOPEG_0408
inference: COORDINATES: protein motif:HMM:NF004266.1
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO function: GO:0003774 - cytoskeletal motor activity [Evidence IEA]
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar assembly protein FliH
translation: MSEHVEQTRWQHWLPADLSLAFADSLPAPLLSADHDEKAWQAELTLLRTQAEQRGFKQGQQEGEQQGYRQGFDKGRSDGFEQGLQDAQTEQEHITAQMADFLSELKATLAGVDAVMPARLMQIALTAASKILGQSPVCDSRVVLSTIQQLLHDRPLFDGCLRLYVHPDDLPSLQSHLGSTLESQGWRLLADGQLLRGGCRIVAEDGEVDATLETRWQQLCQMLKEGLSHDRAAGTLD
SIO_010081: SOPEG_RS02085
subclass of: SO_0000673
so part of: SOPEG_RS02085
location: 395748..396461
location: region:395748-396461:1
so has part: feature:395748-396461:1:exon

WP_025244133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395748-396461:1:exon

SOPEG_RS02090
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: fliI
locus tag: SOPEG_RS02090
old locus tag: SOPEG_0409
so part of: sequence
location: 396433..397809
location: region:396433-397809:1
so has part: feature:396433-397809:1:exon
subclass of: SO_0000010

position:396433:1
position: 396433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397809:1
position: 397809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396433-397809:1:exon

SOPEG_RS02090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: fliI
locus tag: SOPEG_RS02090
old locus tag: SOPEG_0409
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409915.1
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar protein export ATPase FliI
translation: MTVQLERWINAMARQERMITTLPDCRHYGRLTRATGMVMEAVGLQLPLGATCLIERYTGKAVSQVECEVVGFKGRQLFLMPLENMEGILPGARVYAPGLVNGNVPARLLPLGPALLGRVLCGGGLPLDNLPPPETGYRASLHSPPLNPLSRSPITEVLDVGVRAINGLLTVGRGQRMGLFAGSGVGKSMLLGMMTRYTQADVIVVGLIGERGREVKDFIENILGEEGIARAVIIAAPADVSPMLRMQGAAYATRIAEDFRDRGKHVLLIMDSLTRYAMAQREIGLAIGEPPATKGYPPSVFAKLPALVERAGNGADGGGSITAFYTVLTEGDDQQDPIADAARAILDGHVVLSRQLAEAGHYPAIDIEASISRAMTALVDTPHFQQVQQVKQWLASYQRNRDLLSVGAYAAGSDPLLDQAIAHYPQLESYLRQDVSQRCNYAQSCQQLSSIFTPPSTA
SIO_010081: SOPEG_RS02090
subclass of: SO_0000673
so part of: SOPEG_RS02090
location: 396433..397809
location: region:396433-397809:1
so has part: feature:396433-397809:1:exon

WP_025244134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:396433-397809:1:exon

SOPEG_RS28165
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: fliJ
locus tag: SOPEG_RS28165
old locus tag: SOPEG_0411
so part of: sequence
location: 397820..399502
location: region:397820-399502:1
so has part: feature:397820-399502:1:exon
subclass of: SO_0000010

position:397820:1
position: 397820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399502:1
position: 399502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397820-399502:1:exon

SOPEG_RS28165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: fliJ
locus tag: SOPEG_RS28165
old locus tag: SOPEG_0411
inference: COORDINATES: protein motif:HMM:TIGR02473.1
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO function: GO:0003774 - cytoskeletal motor activity [Evidence IEA]
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]; GO:0006935 - chemotaxis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar export protein FliJ
translation: MTSTSPIETLREHAERALEEALLQLGACRRAHASAVAQLNQLMDYEQDYRKQLEENMTGTGLNVDKWINYQSFIASLYKIVAHHSQQVSVFQSRVDLAMAHWQQKKQRLNEFAILKTRSDNARQLRESRRNQKQMDEFALRASLKESGIMIPNASAVIRGGGQPIAAALPAELPQSEFADALEHYLAGIRRQDVGADSTATDPKATLTQRCKALTALIHRRLAEGDNALDDDELQHLQALLAQLALQQWPADGDPVLAKLGIASVPARDQRNGAGLALAEPRAEVDGPAQTPSGAGGERAVAPSALSAIAPEFTDAQSAEVQGKKEQQPLLLVPSTKRNASRAENTPLRLDTVNLQSVAARLRGEALSRTATPADKLAATATPTSSAPPSAGLEAITTDAPSLRTPAPPPAPIAHLRQPLGSPAWQQQLGEHITLFNRNGIFHAQLHLHPQELGAVKVNLRLNKEQLQVHFASDNQQVRAVLETAMTQLRTSLTENGIALGDTSVGTDESGHDASGHQQDRGDSPQHGQGRRKSLFVAHRNGGGSAGPGAWYRDGIDIYA
SIO_010081: SOPEG_RS28165
subclass of: SO_0000673
so part of: SOPEG_RS28165
location: 397820..399502
location: region:397820-399502:1
so has part: feature:397820-399502:1:exon

WP_025244135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:397820-399502:1:exon

SOPEG_RS02100
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02100
old locus tag: SOPEG_0412
so part of: sequence
location: 399689..400123
location: region:399689-400123:1
so has part: feature:399689-400123:1:exon
subclass of: SO_0000010

position:399689:1
position: 399689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400123:1
position: 400123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399689-400123:1:exon

SOPEG_RS02100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02100
old locus tag: SOPEG_0412
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014353858.1
GO component: GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]; GO:0006935 - chemotaxis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar basal body-associated FliL family protein
translation: MGLIAVLALSLFVYLQPGVKKELLPVTQTVDGLPAENDLPPVYFPLDPFTVSLQPEDGDYGAMLYVGLTLRLRDEKTRELVESQLPELRNHLILLLSQQSLASLTSAADKQALLKKIKRELNQQHPNGQPSFVTDVFFNSFIVR
SIO_010081: SOPEG_RS02100
subclass of: SO_0000673
so part of: SOPEG_RS02100
location: 399689..400123
location: region:399689-400123:1
so has part: feature:399689-400123:1:exon

WP_236851594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:399689-400123:1:exon

SOPEG_RS02105
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: fliM
locus tag: SOPEG_RS02105
old locus tag: SOPEG_0413
so part of: sequence
location: 400129..401142
location: region:400129-401142:1
so has part: feature:400129-401142:1:exon
subclass of: SO_0000010

position:400129:1
position: 400129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401142:1
position: 401142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400129-401142:1:exon

SOPEG_RS02105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: fliM
locus tag: SOPEG_RS02105
old locus tag: SOPEG_0413
inference: COORDINATES: protein motif:HMM:TIGR01397.1
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar motor switch protein FliM
translation: MSEKESVRFGPLTRKQAKQELRQAQARAAQQTPLQAGSGSPFDAVQRRRLGGERLKGLEMINQDFAGRFRRALFTLMQRRTDISAEAILIQPYREFAAQLRPPASLNLISLKPLRGNTLFAFTPGLIFTALDTLFGGNGRLPDTQERAFTPAEQRVIDRLLKLMLHAYGDAWLGLHPLEPEFITAETSCRFTGFSDGEMVVVSPFRVAIGAMQGEFAIIFSQAALESLHEMLSKPLPEHIRQDQGQWRQNLARQLQGTELELIARFADLPLCLSRVMALRRGDILPIPRPERLTAYVDGVPVFLGSYGSLNGQYALRVEHVINQDINQLNNKDISHE
SIO_010081: SOPEG_RS02105
subclass of: SO_0000673
so part of: SOPEG_RS02105
location: 400129..401142
location: region:400129-401142:1
so has part: feature:400129-401142:1:exon

WP_025244137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:400129-401142:1:exon

SOPEG_RS02110
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: fliN
locus tag: SOPEG_RS02110
old locus tag: SOPEG_0414
so part of: sequence
location: 401135..401539
location: region:401135-401539:1
so has part: feature:401135-401539:1:exon
subclass of: SO_0000010

position:401135:1
position: 401135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401539:1
position: 401539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401135-401539:1:exon

SOPEG_RS02110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: fliN
locus tag: SOPEG_RS02110
old locus tag: SOPEG_0414
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012668411.1
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO function: GO:0003774 - cytoskeletal motor activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar motor switch protein FliN
translation: MSDTSHMPDGEAPLHETDAQTNGDAARPAPTGPEFPAADAAEEESPLREDLSLILDIPVKMTVELGRTRMTIRELLHLSQDAVVPLEGLAGEPLDILINGYLIARGEVVVMGEQYGVRIADIVTPAERMRRLSR
SIO_010081: SOPEG_RS02110
subclass of: SO_0000673
so part of: SOPEG_RS02110
location: 401135..401539
location: region:401135-401539:1
so has part: feature:401135-401539:1:exon

WP_025244138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:401135-401539:1:exon

SOPEG_RS02115
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: fliO
locus tag: SOPEG_RS02115
old locus tag: SOPEG_0415
so part of: sequence
location: 401540..401914
location: region:401540-401914:1
so has part: feature:401540-401914:1:exon
subclass of: SO_0000010

position:401540:1
position: 401540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401914:1
position: 401914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401540-401914:1:exon

SOPEG_RS02115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: fliO
locus tag: SOPEG_RS02115
old locus tag: SOPEG_0415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012906239.1
GO process: GO:0044781 - bacterial-type flagellum organization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar biosynthetic protein FliO
translation: MKQTTLQSPVAYDSGHGAALFNVAGSLGAVLLLILLLLKLARRLGYFAPRHGGQPLLKVRAGCSLGNRERVVVVEAGEHWLVLGVTPGRITHLHTLPAGDAAPEELPPTFSTLCARGRQSRETT
SIO_010081: SOPEG_RS02115
subclass of: SO_0000673
so part of: SOPEG_RS02115
location: 401540..401914
location: region:401540-401914:1
so has part: feature:401540-401914:1:exon

WP_025244139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:401540-401914:1:exon

SOPEG_RS02120
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: fliP
locus tag: SOPEG_RS02120
old locus tag: SOPEG_0416
so part of: sequence
location: 401911..402711
location: region:401911-402711:1
so has part: feature:401911-402711:1:exon
subclass of: SO_0000010

position:401911:1
position: 401911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402711:1
position: 402711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401911-402711:1:exon

SOPEG_RS02120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: fliP
locus tag: SOPEG_RS02120
old locus tag: SOPEG_0416
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017375274.1
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar type III secretion system pore protein FliP
translation: MSMPTLRASLRARRGTAGGVWPFWLLLALPLLLLPYQAAHAAEQGLLQIHTLPDGGQRWSLPVQTLVLLTSLTFLPAALLLMSGFTRIIIVLGILRNALGTPSAPPNQVLLGLALCLTFFVMSPVLDSIYRDAYLPFSKDQIGMETAVQRAAQPLRQFMLTQTRKTDLSLYARLGKQTELAGPEQVPMRILLPAFVTSELKTAFQIGFTLFIPFLIIDLVIASVLMALGMMMLPPTTVSLPFKLMLFVMVDGWQLLLGSLAQSFFS
SIO_010081: SOPEG_RS02120
subclass of: SO_0000673
so part of: SOPEG_RS02120
location: 401911..402711
location: region:401911-402711:1
so has part: feature:401911-402711:1:exon

WP_025244140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:401911-402711:1:exon

SOPEG_RS02125
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: fliQ
locus tag: SOPEG_RS02125
old locus tag: SOPEG_ps0417
pseudo: true
so part of: sequence
location: 402730..403000
location: region:402730-403000:1
so has part: feature:402730-403000:1:exon
subclass of: SO_0000010

position:402730:1
position: 402730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403000:1
position: 403000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402730-403000:1:exon

SOPEG_RS02125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: fliQ
locus tag: SOPEG_RS02125
old locus tag: SOPEG_ps0417
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013202684.1
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: flagellar biosynthesis protein FliQ
SIO_010081: SOPEG_RS02125
subclass of: SO_0000673
so part of: SOPEG_RS02125
location: 402730..403000
location: region:402730-403000:1
so has part: feature:402730-403000:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:402730-403000:1:exon

SOPEG_RS02130
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: fliR
locus tag: SOPEG_RS02130
old locus tag: SOPEG_0418
so part of: sequence
location: 403006..403794
location: region:403006-403794:1
so has part: feature:403006-403794:1:exon
subclass of: SO_0000010

position:403006:1
position: 403006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403794:1
position: 403794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403006-403794:1:exon

SOPEG_RS02130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: fliR
locus tag: SOPEG_RS02130
old locus tag: SOPEG_0418
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409906.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar biosynthetic protein FliR
translation: MLDLTALPAAIGPHFWPLARLLGLFVSAPLLSEKIITNKVKIGLAVLITLLIAPGLEPVATPLVSAAGLWLIMVQLIIGVTVGLTLQFAFSAMRFAGEVIGLQMGLSFATFFDPFSGPNSPIIARLFNVLLLLLFVSLDAHLLMIDVLVDTFQLLPIAPLPLNGENFLALARAAGLLFSCGLMLALPAMTLLLLLNITLGVLNRLTPQFSVFVIGFPLTLGGGLLALMLVMPLLATFAEGLLSTLFQQLSAILAAMGGGQQA
SIO_010081: SOPEG_RS02130
subclass of: SO_0000673
so part of: SOPEG_RS02130
location: 403006..403794
location: region:403006-403794:1
so has part: feature:403006-403794:1:exon

WP_025244141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403006-403794:1:exon

SOPEG_RS02135
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: flgL
locus tag: SOPEG_RS02135
old locus tag: SOPEG_0419
so part of: sequence
location: complement(403844..404782)
location: region:403844-404782:-1
so has part: feature:403844-404782:-1:exon
subclass of: SO_0000010

position:403844:-1
position: 403844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404782:-1
position: 404782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403844-404782:-1:exon

SOPEG_RS02135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: flgL
locus tag: SOPEG_RS02135
old locus tag: SOPEG_0419
inference: COORDINATES: protein motif:HMM:TIGR02550.1
GO component: GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook-associated protein FlgL
translation: MNLSTHYMYQQQTQFIMSSASRFNDVAMHLSANTRVLRPSDDPAAAMDVVTYRNALAQLDYYSGTRGYARAVLTKEGDTLQTVTNTLSAINAKIMAIQKPAGDLAPIIQELEGLRDDLLASANAQDTSGNYIFAGYKADVKPFQKAQGSDDIVYQGGGTAIGQQVDEGREMKIGHIGSDIFNIEGQDTVFKKLDALIGALKSDAGNEGGGAWPGEELKAIMDAARSAVRKTEDNVGNAQVVSGLNLQLLDNLDAAGVSQREGITDRLQQGLGQDTGSQIALVTELQLSQVAMDSSMMVFQMMQNMSLFNLMK
SIO_010081: SOPEG_RS02135
subclass of: SO_0000673
so part of: SOPEG_RS02135
location: complement(403844..404782)
location: region:403844-404782:-1
so has part: feature:403844-404782:-1:exon

WP_025244142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403844-404782:-1:exon

SOPEG_RS02140
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: flgK
locus tag: SOPEG_RS02140
old locus tag: SOPEG_0420
so part of: sequence
location: complement(404840..406510)
location: region:404840-406510:-1
so has part: feature:404840-406510:-1:exon
subclass of: SO_0000010

position:404840:-1
position: 404840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406510:-1
position: 406510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404840-406510:-1:exon

SOPEG_RS02140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: flgK
locus tag: SOPEG_RS02140
old locus tag: SOPEG_0420
inference: COORDINATES: protein motif:HMM:TIGR02492.1
GO component: GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook-associated protein FlgK
translation: MLNLYYIASSGLQTGQQALSVIGNNLANATNPNYSRQNIILGAAGGRVTATGYIGNGVRVEGVARAFDEYANERVRGTETLLRVSGAHYDKMSSLDLEFSRTDNGIDTKLNSLFNALKNISKVPTNGNYRSSAFTALKELTGRFNKLSDELIKQEQKNNQDIRQSVNVINQLTGQLASLNREISNRQSIDGGGAYDLLDRRDALLQALSQQTGINTQIDSRTGAVNVTLSNGHMLVSGDKANALEVTTDNNNPGRQVIAYRDAENAIIPLQDSLLDKGVLGGLLAFRNQDLPEIRDRLNELARHLSHRFNEVNKQGYDANGEKGKNLFSYALPNAIANGKNQGEASLSVTALNTDPATEGGVAKPQEYTLRFENGTWQVTGTADGRKVESTFVDGKLTFEGVTVAVKGDAQEGDSYQLNPFNGIADSMAVSIKNGDEIAAASEKDPQDTDGKETGNNGNSIALGNIQHDKLINGATLSDAYAGLIGYVGTTTRNLMETASSQEKAFQDAYVERSEKTGVNLNQEYVQMEMFRQYYNASAQVLQTANSLLDTLLTIR
SIO_010081: SOPEG_RS02140
subclass of: SO_0000673
so part of: SOPEG_RS02140
location: complement(404840..406510)
location: region:404840-406510:-1
so has part: feature:404840-406510:-1:exon

WP_025244143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404840-406510:-1:exon

SOPEG_RS02145
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02145
old locus tag: SOPEG_ps0421
so part of: sequence
location: complement(406619..407242)
location: region:406619-407242:-1
so has part: feature:406619-407242:-1:exon
subclass of: SO_0000010

position:406619:-1
position: 406619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407242:-1
position: 407242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406619-407242:-1:exon

SOPEG_RS02145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02145
old locus tag: SOPEG_ps0421
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012848092.1
GO function: GO:0004040 - amidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucosaminidase domain-containing protein
translation: MKIRAAQASSQGVADAARQVEGLFVDMMLKSMRATLPQEGLLTSAQTQLYTSLYDQQLAQDLTARGVGLAQAALESGWGARKIRTAHGAPSHNLFGIKADAGWRGESTQITTTEWVDGVMQKVKAKFRVYASYGEALRDYTRLLTENTRYRRVMQASTPEQAARSLQSSGYATDPHYADKLITIIAQLKTVGQRAQAAYQHDLATLF
SIO_010081: SOPEG_RS02145
subclass of: SO_0000673
so part of: SOPEG_RS02145
location: complement(406619..407242)
location: region:406619-407242:-1
so has part: feature:406619-407242:-1:exon

WP_236851756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:406619-407242:-1:exon

SOPEG_RS02150
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02150
old locus tag: SOPEG_0422
so part of: sequence
location: complement(407299..408396)
location: region:407299-408396:-1
so has part: feature:407299-408396:-1:exon
subclass of: SO_0000010

position:407299:-1
position: 407299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408396:-1
position: 408396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:407299-408396:-1:exon

SOPEG_RS02150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02150
old locus tag: SOPEG_0422
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409902.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar basal body P-ring protein FlgI
translation: MMLSLCAVAGLLLAPSIQAERIRDLTTVLGVRENALIGYGLVVGLDGTGDQTTQTPFTTQSLRNMLSQLGVTVPTGTNMQLKNVAAVMVTAKLPAFARAGQKIDVVVSSLGSAKSLRGGTLLMTPLKGVDNQVYALAQGNILVSGSGAQAGGNRVQVNQLNGGRISGGAIVERSVPADFAGGNVIMLQLNNDDFSLAQQISDAINRHFGRRSALPLDSRTINVAVPRDGPGKVRFLASLQNIPITLGPTDAVVVINSRTGSVVMNRDVVLGSCAVAHDELTVEVNRTYKVSQPNTPFGGGHTVVVPDTAINVRNEGGALQQIDAGANLNDVVSALNGIGATPNDLMAILQSMQSAGCLNAKLEIN
SIO_010081: SOPEG_RS02150
subclass of: SO_0000673
so part of: SOPEG_RS02150
location: complement(407299..408396)
location: region:407299-408396:-1
so has part: feature:407299-408396:-1:exon

WP_025244145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:407299-408396:-1:exon

SOPEG_RS02155
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02155
old locus tag: SOPEG_ps0423
so part of: sequence
location: complement(408427..409092)
location: region:408427-409092:-1
so has part: feature:408427-409092:-1:exon
subclass of: SO_0000010

position:408427:-1
position: 408427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409092:-1
position: 409092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408427-409092:-1:exon

SOPEG_RS02155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02155
old locus tag: SOPEG_ps0423
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015367324.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar basal body L-ring protein FlgH
translation: MALATLLLGGCTAPPPRPLVAGATTAAPAPPMPIAVNGSVFQPGQAMNYGYQPLFEDRRPRNIGDTLTIMLQENVSASKSSSSNADRKGNADFGINALPSMLNGLMGGDRLATDIESSNGFNGKGGAAAKNTFSGTITVTVIDVLTNGNLRVVGEKQIAINQGTEFIRFSGIVNPRTIDGNNQVVSTLVSDARIEYVGDGYINEAQQMGWLQRFFLNYFPF
SIO_010081: SOPEG_RS02155
subclass of: SO_0000673
so part of: SOPEG_RS02155
location: complement(408427..409092)
location: region:408427-409092:-1
so has part: feature:408427-409092:-1:exon

WP_038468077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:408427-409092:-1:exon

SOPEG_RS02160
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: flgG
locus tag: SOPEG_RS02160
old locus tag: SOPEG_0424
so part of: sequence
location: complement(409259..410041)
location: region:409259-410041:-1
so has part: feature:409259-410041:-1:exon
subclass of: SO_0000010

position:409259:-1
position: 409259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410041:-1
position: 410041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409259-410041:-1:exon

SOPEG_RS02160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: flgG
locus tag: SOPEG_RS02160
old locus tag: SOPEG_0424
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004392149.1
GO component: GO:0009426 - bacterial-type flagellum basal body, distal rod [Evidence IEA]
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar basal-body rod protein FlgG
translation: MMRSLMIAKTGLEAQQTNMDVISNNIANVSTMGFKRQQAVFEDLLYQTVRQPGAKSSEQTTIPSGLQLGAGVRPVATTRIHLQGGLTNTGNPTDVAIEGSGFLQVLMPDGTNAYTRDGSLQRDQYGQLVTSSGYPIQPAVTIPNGASNLTISKDGLVSVTLPGQTEPQEVGQLTLATFINDAGLQSLGENLYYETPSSGAPMENKPGMNGAGALKQQFLENSNVNVAQELITMIQAQRAYELNSKAISTSDQMLQRLVQL
SIO_010081: SOPEG_RS02160
subclass of: SO_0000673
so part of: SOPEG_RS02160
location: complement(409259..410041)
location: region:409259-410041:-1
so has part: feature:409259-410041:-1:exon

WP_025244147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409259-410041:-1:exon

SOPEG_RS02165
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02165
old locus tag: SOPEG_0425
so part of: sequence
location: complement(410062..410820)
location: region:410062-410820:-1
so has part: feature:410062-410820:-1:exon
subclass of: SO_0000010

position:410062:-1
position: 410062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410820:-1
position: 410820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410062-410820:-1:exon

SOPEG_RS02165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02165
old locus tag: SOPEG_0425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004159246.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar basal body rod protein FlgF
translation: MDRAIYTAMGVASAALTQQSVAANNLANAATTGFRAQLAAFRAAPVNGPTLATRTLVVPSVPGNDFSPGPINISGNNLDVALDQHGWLAVRLPDGGEAYTRNGRIEIDSAGGLKVQNYPLLGADGQPLTVPPGAAVTFGPDGTLSVLGDGDEPKTLVQIGQLKLVRLEPDSLRHDDSGLFNLTDTARAQRGAVLPADPTLRLTPGAFEGSNVSPVQTMVEMIGNARSFEMQMKVISNVNDNARAGNQLLAIG
SIO_010081: SOPEG_RS02165
subclass of: SO_0000673
so part of: SOPEG_RS02165
location: complement(410062..410820)
location: region:410062-410820:-1
so has part: feature:410062-410820:-1:exon

WP_025244148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:410062-410820:-1:exon

SOPEG_RS02170
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: flgE
locus tag: SOPEG_RS02170
old locus tag: SOPEG_0426
so part of: sequence
location: complement(410833..412056)
location: region:410833-412056:-1
so has part: feature:410833-412056:-1:exon
subclass of: SO_0000010

position:410833:-1
position: 410833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412056:-1
position: 412056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410833-412056:-1:exon

SOPEG_RS02170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: flgE
locus tag: SOPEG_RS02170
old locus tag: SOPEG_0426
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409898.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook protein FlgE
translation: MGFAQGVSGLNAAAQALDVIGNNIANAQTVGFKSSSASFADMFSGSMIGLGVQLAGVQQDFNDGTMIAGAGNLNMAIAGSGFFRLADNGGKIYYSRNGEFDRNKYGEIVNKQGKHLTGYKATGTPPTISGGAPLENIIVPDAPIPASETTEGSISDNLPSGAKPLEIKDFDPTNDKSYNYTSQLQAYDSLGNLHIIKVFYIKGENAGEWKVHCFDETASVKEGDKNKLFTADIKFDEYGKVKEVNPKEFKVESESLNGAKKLNFALDLTAMTQQGDEKPSGKTSTNGYGVGKFNGYSVGDNGEIIANYSNQQTQLIAQVLMASFTNTGGLQPTGDNCWTETGASGAPLIGTSGTGSFGAIRGKMLEASNVDMSNELVKMMTQQRNYQSNAQTIKTQDQLLQTLVSMR
SIO_010081: SOPEG_RS02170
subclass of: SO_0000673
so part of: SOPEG_RS02170
location: complement(410833..412056)
location: region:410833-412056:-1
so has part: feature:410833-412056:-1:exon

WP_025244149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:410833-412056:-1:exon

SOPEG_RS02175
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02175
old locus tag: SOPEG_0427
so part of: sequence
location: complement(412108..412929)
location: region:412108-412929:-1
so has part: feature:412108-412929:-1:exon
subclass of: SO_0000010

position:412108:-1
position: 412108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412929:-1
position: 412929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412108-412929:-1:exon

SOPEG_RS02175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02175
old locus tag: SOPEG_0427
inference: COORDINATES: protein motif:HMM:NF015896.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook capping FlgD N-terminal domain-containing protein
translation: MELAGLAPREYSRGASTLLASRDASSTANNFALNAQDAQTHGALKAGNTDAATSDSRAATSAMDAQSEGTQELMDNFLQMMLAQIKNQDPTNPMDNNQLASQMAQMHVALGVEKLNNTVLGMGGMVNSVQAVNLSNWVGRTVLIVGKPSVSFEGQTAYGFELPSGADEVRVTFTDEQGKAYTQDYKDVKPGAYKLDIRKAQTTPPIDASSPLDDDKAKHYDVSIEAKNKDESRPMVNALKAAKVENVFFSNGSAKLALGLDGAIYLKDVILVE
SIO_010081: SOPEG_RS02175
subclass of: SO_0000673
so part of: SOPEG_RS02175
location: complement(412108..412929)
location: region:412108-412929:-1
so has part: feature:412108-412929:-1:exon

WP_025244150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:412108-412929:-1:exon

SOPEG_RS02180
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: flgC
locus tag: SOPEG_RS02180
old locus tag: SOPEG_ps0428
pseudo: true
so part of: sequence
location: complement(412941..>413294)
location: region:412941-413294:-1
so has part: feature:412941-413294:-1:exon
subclass of: SO_0000010

position:412941:-1
position: 412941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413294:-1
position: 413294
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412941-413294:-1:exon

SOPEG_RS02180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: flgC
locus tag: SOPEG_RS02180
old locus tag: SOPEG_ps0428
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002211111.1
GO component: GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: flagellar basal body rod protein FlgC
SIO_010081: SOPEG_RS02180
subclass of: SO_0000673
so part of: SOPEG_RS02180
location: complement(412941..>413294)
location: region:412941-413294:-1
so has part: feature:412941-413294:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:412941-413294:-1:exon

SOPEG_RS02185
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02185
old locus tag: SOPEG_0429
so part of: sequence
location: 413370..414293
location: region:413370-414293:1
so has part: feature:413370-414293:1:exon
subclass of: SO_0000010

position:413370:1
position: 413370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414293:1
position: 414293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413370-414293:1:exon

SOPEG_RS02185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02185
old locus tag: SOPEG_0429
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDLTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDSIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKIFGEGEWKVRQHGAERRRVWRKLHLAVDSATHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKTLLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS02185
subclass of: SO_0000673
so part of: SOPEG_RS02185
location: 413370..414293
location: region:413370-414293:1
so has part: feature:413370-414293:1:exon

WP_025244151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:413370-414293:1:exon

SOPEG_RS02190
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: flgA
locus tag: SOPEG_RS02190
old locus tag: SOPEG_ps0430
so part of: sequence
location: 414385..414969
location: region:414385-414969:1
so has part: feature:414385-414969:1:exon
subclass of: SO_0000010

position:414385:1
position: 414385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414969:1
position: 414969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414385-414969:1:exon

SOPEG_RS02190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: flgA
locus tag: SOPEG_RS02190
old locus tag: SOPEG_ps0430
inference: COORDINATES: protein motif:HMM:TIGR03170.1
GO component: GO:0009428 - bacterial-type flagellum basal body, distal rod, P ring [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar basal body P-ring formation chaperone FlgA
translation: MDSSLVQKVTLKTPAKLLPGCPSPHLQLASHGRLSGNMSVTACCGERRYFLQIQVRARGDYWVAARALPAGTSLSAKDIVKEHGELVGQARNVIFATQPVTGSLTTRTIQAGQPLAATMLCAPWKVRQGNPVAVVSRGPGFQVRHYGKAMSEAAVGDTLRVRLASGQMVSGAVDNQGVVLQNERAFSSFSVPGR
SIO_010081: SOPEG_RS02190
subclass of: SO_0000673
so part of: SOPEG_RS02190
location: 414385..414969
location: region:414385-414969:1
so has part: feature:414385-414969:1:exon

WP_158382318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414385-414969:1:exon

SOPEG_RS02195
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: flgM
locus tag: SOPEG_RS02195
old locus tag: SOPEG_0431
so part of: sequence
location: 415014..415289
location: region:415014-415289:1
so has part: feature:415014-415289:1:exon
subclass of: SO_0000010

position:415014:1
position: 415014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415289:1
position: 415289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415014-415289:1:exon

SOPEG_RS02195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: flgM
locus tag: SOPEG_RS02195
old locus tag: SOPEG_0431
inference: COORDINATES: protein motif:HMM:TIGR03824.1
GO process: GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar biosynthesis anti-sigma factor FlgM
translation: MSIERTLPAQAITAVVNDLRHGQSELPRRQPISRRDSRSQEITLSDTRLQVRSQDVDRTRVAQLQQAIGQGKLIMNSGRMADALLMNAWQN
SIO_010081: SOPEG_RS02195
subclass of: SO_0000673
so part of: SOPEG_RS02195
location: 415014..415289
location: region:415014-415289:1
so has part: feature:415014-415289:1:exon

WP_025244153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:415014-415289:1:exon

SOPEG_RS02200
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02200
old locus tag: SOPEG_0432
so part of: sequence
location: 415328..415771
location: region:415328-415771:1
so has part: feature:415328-415771:1:exon
subclass of: SO_0000010

position:415328:1
position: 415328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415771:1
position: 415771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415328-415771:1:exon

SOPEG_RS02200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02200
old locus tag: SOPEG_0432
inference: COORDINATES: protein motif:HMM:NF016985.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar protein FlgN
translation: MDNLTLALRQLDQALDKLGQILQAEYQLLATVPLQPVALQGVTHDKSQQISAVAHYDALRQRAEVDCGLRAPYTRHPDLDDLWAWIQVRTRDLHEQNRRNGVSLKAQMAHVRSLSSAIKALAPQQMFYCADGASHHGMRLQNLDINV
SIO_010081: SOPEG_RS02200
subclass of: SO_0000673
so part of: SOPEG_RS02200
location: 415328..415771
location: region:415328-415771:1
so has part: feature:415328-415771:1:exon

WP_025244154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:415328-415771:1:exon

SOPEG_RS02205
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: flhA
locus tag: SOPEG_RS02205
old locus tag: SOPEG_0433
so part of: sequence
location: complement(416161..418257)
location: region:416161-418257:-1
so has part: feature:416161-418257:-1:exon
subclass of: SO_0000010

position:416161:-1
position: 416161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418257:-1
position: 418257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416161-418257:-1:exon

SOPEG_RS02205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: flhA
locus tag: SOPEG_RS02205
old locus tag: SOPEG_0433
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409891.1
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar biosynthesis protein FlhA
translation: MVNLVAKLHLTDFSQTRWQIFTGPVVIIMILSMMILPLPPFALDLFFTFNIVLSIMILLVAMFTQRTLDFAAFPTVLLFSTLLRLALNVASARVILLQGHQGEAAAGQVIDAFGHFLVGGNFAIGIVVFAILVIINFMVITKGAGRIAEVGARFVLDGMPGKQMAIDADLNAGLIGEEEAKQRRSEVTQEADFYGSMDGASKFVRGDAIAGLLIMAINLIGGLLVGVMQHGMDLGRAGETYTLLTIGDGLVAQIPALVISTAAGVIVTRVATHQDVGEQMVSQLFNNPRVMMLSAAMIGLLGLVPGMPNIVFLLFTLVLLGMAWLLRHHAVMHGETATAGALGDNPAPETRQSEEASWDDVQPEDTLGLEVGYRLIPMVDSSQGAELLKRIRGIRKKFAREMGYLPPVVHIRDNLEIPPTHYRILLHGVEIGCGDTYPERWMAINPGNASDTLPGDPCQEPAFGLPAVWIDQVLCDEAKTLGYTVVDASTVVATHFNQLLMQHAEELFGRQETQELLAHLGREMPKLTEDLIPDVFSLTTLHKVLQNLLAEQVSIRDMRSIVECLAEHAPQQNDVDMLTSLVRHKLARAITQRWFPGTGDIQVIGLEVALEQALIQAVQNGGALEPGVADRLLVQAERALQRQLALGAPTVLLVNPVLRTMLSRFLRRSLPQLTVLASTEIADNRPVRFNTMIGAAAE
SIO_010081: SOPEG_RS02205
subclass of: SO_0000673
so part of: SOPEG_RS02205
location: complement(416161..418257)
location: region:416161-418257:-1
so has part: feature:416161-418257:-1:exon

WP_025244155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416161-418257:-1:exon

SOPEG_RS02210
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: flhB
locus tag: SOPEG_RS02210
old locus tag: SOPEG_ps0434
pseudo: true
so part of: sequence
location: complement(418238..419396)
location: region:418238-419396:-1
so has part: feature:418238-419396:-1:exon
subclass of: SO_0000010

position:418238:-1
position: 418238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419396:-1
position: 419396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418238-419396:-1:exon

SOPEG_RS02210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: flhB
locus tag: SOPEG_RS02210
old locus tag: SOPEG_ps0434
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409890.1
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: flagellar biosynthesis protein FlhB
SIO_010081: SOPEG_RS02210
subclass of: SO_0000673
so part of: SOPEG_RS02210
location: complement(418238..419396)
location: region:418238-419396:-1
so has part: feature:418238-419396:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:418238-419396:-1:exon

SOPEG_RS02215
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: motB
locus tag: SOPEG_RS02215
old locus tag: SOPEG_0435
so part of: sequence
location: complement(419596..420648)
location: region:419596-420648:-1
so has part: feature:419596-420648:-1:exon
subclass of: SO_0000010

position:419596:-1
position: 419596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420648:-1
position: 420648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419596-420648:-1:exon

SOPEG_RS02215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: motB
locus tag: SOPEG_RS02215
old locus tag: SOPEG_0435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409889.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar motor protein MotB
translation: MKKTSPPVVIKWRRVQHVDHHVSSWKIAYADFMTAMMAFFLVMWLLGATTQQQREQIAEYFRMPLSEAITHNRKFNINDFPLPANANDATEPARQRQLEHQRDIQRLNDTHLRLEQMLRNDPRLRELQPNMRITLMHEGLRIEIIDSKRRPMFATGGTEIAPYMRSIMHIIAPVLNDLPNRISLAGHTDNQPYLNGERGYGNWELSADRANASRRELVEGGLMSDKILQVIGMANTMAPPGKEDDNAAQRRISIVILTHEQEEAIRQENTEIHSEVIDGDQDAAAQLRRLTKPPRGKDTASSGPSVPSGSSAPSVSSGPSAPSDAMSSAPNDDNDGAGGKTPATIPPNAP
SIO_010081: SOPEG_RS02215
subclass of: SO_0000673
so part of: SOPEG_RS02215
location: complement(419596..420648)
location: region:419596-420648:-1
so has part: feature:419596-420648:-1:exon

WP_025244156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:419596-420648:-1:exon

SOPEG_RS02220
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: motA
locus tag: SOPEG_RS02220
old locus tag: SOPEG_ps0436
so part of: sequence
location: complement(420645..421508)
location: region:420645-421508:-1
so has part: feature:420645-421508:-1:exon
subclass of: SO_0000010

position:420645:-1
position: 420645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421508:-1
position: 421508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420645-421508:-1:exon

SOPEG_RS02220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: motA
locus tag: SOPEG_RS02220
old locus tag: SOPEG_ps0436
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409888.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar motor stator protein MotA
translation: MQQSGFLLAEGQLGALFQPAEFMIIVGAGLGTFVAGNNGKAIYATVKSIPRLFRSSRYNKAMYMDIMALMYRLLSKSRQSGLITLEKEIDDPHNSVIFNHYPSLHADKLVIDFLIDYLRLMVSGNLNAYEIEALMNEEIETYEQENDIPVNSLLHVGDALPAFGIVAAVMGVVNALAAAADRPAGELGALIANAMVGTLLGILLAYGCVMPLGALLKQKGDEHIKMLHCIRVTLLSSLNGYAPPIAIEFGRKTLYTSERPSFEELEAHLRQIKKTGLMESADTTVNS
SIO_010081: SOPEG_RS02220
subclass of: SO_0000673
so part of: SOPEG_RS02220
location: complement(420645..421508)
location: region:420645-421508:-1
so has part: feature:420645-421508:-1:exon

WP_051419391.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:420645-421508:-1:exon

SOPEG_RS02225
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02225
old locus tag: SOPEG_0437
so part of: sequence
location: complement(421552..422475)
location: region:421552-422475:-1
so has part: feature:421552-422475:-1:exon
subclass of: SO_0000010

position:421552:-1
position: 421552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422475:-1
position: 422475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421552-422475:-1:exon

SOPEG_RS02225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02225
old locus tag: SOPEG_0437
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDLTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDSIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKIFGEGEWKVRQHGAERRRVWRKLHLAVDSATHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKILLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS02225
subclass of: SO_0000673
so part of: SOPEG_RS02225
location: complement(421552..422475)
location: region:421552-422475:-1
so has part: feature:421552-422475:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:421552-422475:-1:exon

SOPEG_RS02230
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: flhC
locus tag: SOPEG_RS02230
old locus tag: SOPEG_0438
so part of: sequence
location: complement(422707..423297)
location: region:422707-423297:-1
so has part: feature:422707-423297:-1:exon
subclass of: SO_0000010

position:422707:-1
position: 422707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423297:-1
position: 423297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422707-423297:-1:exon

SOPEG_RS02230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: flhC
locus tag: SOPEG_RS02230
old locus tag: SOPEG_0438
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409887.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0045893 - positive regulation of DNA-templated transcription [Evidence IEA]; GO:1902208 - regulation of bacterial-type flagellum assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar transcriptional regulator FlhC
translation: MYRKSIMQESRDIQLAMELIALGARLPILENETCLSRSRLLRLYKEVKGTPAPKGLLPFSADWFLSWEQNIHSSAFYNAYLCLIRIGNIPTIEAMIKAYRLYLELCPQRQDGGPVLGLTRAWILLRFIDSQLLGQTRCKQCGGAFITYAFHPPHNFVCSFCHPPSRAVKKRKLSHAAADNRIYNLRQRNMCNVKPC
SIO_010081: SOPEG_RS02230
subclass of: SO_0000673
so part of: SOPEG_RS02230
location: complement(422707..423297)
location: region:422707-423297:-1
so has part: feature:422707-423297:-1:exon

WP_025244158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:422707-423297:-1:exon

SOPEG_RS02235
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: flhD
locus tag: SOPEG_RS02235
old locus tag: SOPEG_ps0439
so part of: sequence
location: complement(423309..423647)
location: region:423309-423647:-1
so has part: feature:423309-423647:-1:exon
subclass of: SO_0000010

position:423309:-1
position: 423309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423647:-1
position: 423647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423309-423647:-1:exon

SOPEG_RS02235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: flhD
locus tag: SOPEG_RS02235
old locus tag: SOPEG_ps0439
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011069834.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0045893 - positive regulation of DNA-templated transcription [Evidence IEA]; GO:1902208 - regulation of bacterial-type flagellum assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar transcriptional regulator FlhD
translation: MSSDNLLRNIHEINLSYLLLAQELIKKDKKVAGFRLGVGEDTLDKLAGLSLSELIKLGEINQLICLLRLDDEQIINCLTRESRVDELQQVHTGIVLSTQLLKFSDSRSYPFA
SIO_010081: SOPEG_RS02235
subclass of: SO_0000673
so part of: SOPEG_RS02235
location: complement(423309..423647)
location: region:423309-423647:-1
so has part: feature:423309-423647:-1:exon

WP_025244159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:423309-423647:-1:exon

SOPEG_RS02240
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02240
old locus tag: SOPEG_0440
so part of: sequence
location: complement(424347..425270)
location: region:424347-425270:-1
so has part: feature:424347-425270:-1:exon
subclass of: SO_0000010

position:424347:-1
position: 424347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425270:-1
position: 425270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424347-425270:-1:exon

SOPEG_RS02240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02240
old locus tag: SOPEG_0440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDLTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDSIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKVFGEGEWKVRQHRAERRRVWRKLHLAVDSVTHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKTLLGGHLSLHDYDAQVGETMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS02240
subclass of: SO_0000673
so part of: SOPEG_RS02240
location: complement(424347..425270)
location: region:424347-425270:-1
so has part: feature:424347-425270:-1:exon

WP_025244160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:424347-425270:-1:exon

SOPEG_RS02245
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02245
old locus tag: SOPEG_t0441
so part of: sequence
location: complement(425734..425810)
location: region:425734-425810:-1
so has part: feature:425734-425810:-1:exon
subclass of: SO_0000663

position:425734:-1
position: 425734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425810:-1
position: 425810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425734-425810:-1:exon

SOPEG_RS02245
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2342
locus tag: SOPEG_RS02245
old locus tag: SOPEG_t0441
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(425774..425776),aa:Pro,seq:cgg)
SIO_010081: SOPEG_RS02245
subclass of: SO_0000673
so part of: SOPEG_RS02245
location: complement(425734..425810)
location: region:425734-425810:-1
so has part: feature:425734-425810:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:425734-425810:-1:exon

SOPEG_RS02250
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: eptB
locus tag: SOPEG_RS02250
old locus tag: SOPEG_ps0442
pseudo: true
so part of: sequence
location: complement(425892..427595)
location: region:425892-427595:-1
so has part: feature:425892-427595:-1:exon
subclass of: SO_0000010

position:425892:-1
position: 425892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427595:-1
position: 427595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425892-427595:-1:exon

SOPEG_RS02250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: eptB
locus tag: SOPEG_RS02250
old locus tag: SOPEG_ps0442
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007890810.1
GO function: GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: kdo(2)-lipid A phosphoethanolamine 7''-transferase
SIO_010081: SOPEG_RS02250
subclass of: SO_0000673
so part of: SOPEG_RS02250
location: complement(425892..427595)
location: region:425892-427595:-1
so has part: feature:425892-427595:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:425892-427595:-1:exon

SOPEG_RS02255
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02255
old locus tag: SOPEG_0443
so part of: sequence
location: 427803..428726
location: region:427803-428726:1
so has part: feature:427803-428726:1:exon
subclass of: SO_0000010

position:427803:1
position: 427803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428726:1
position: 428726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427803-428726:1:exon

SOPEG_RS02255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02255
old locus tag: SOPEG_0443
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MAKQKFKITNWPAYNNVLRQRGDLTVWLDESAIAAWTESTPLEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDAIFKLMGLSLRCPDYSLVNRRAKTVDISIKTPTRGEISHLVIDGTGLKIFGEGEWKVRQHGAERRRVWSKLHLAVDNATHEIICADLSLSGTTDAQALPGLINQTHRKIREASAGSAYDTRYCHDTLLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKTLLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS02255
subclass of: SO_0000673
so part of: SOPEG_RS02255
location: 427803..428726
location: region:427803-428726:1
so has part: feature:427803-428726:1:exon

WP_025244161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:427803-428726:1:exon

SOPEG_RS02260
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02260
old locus tag: SOPEG_ps0444
pseudo: true
so part of: sequence
location: <428821..429096
location: region:428821-429096:1
so has part: feature:428821-429096:1:exon
subclass of: SO_0000010

position:428821:1
position: 428821
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:429096:1
position: 429096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428821-429096:1:exon

SOPEG_RS02260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02260
old locus tag: SOPEG_ps0444
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000079794.1
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: flagellin
SIO_010081: SOPEG_RS02260
subclass of: SO_0000673
so part of: SOPEG_RS02260
location: <428821..429096
location: region:428821-429096:1
so has part: feature:428821-429096:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:428821-429096:1:exon

SOPEG_RS02265
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02265
old locus tag: SOPEG_0445
so part of: sequence
location: 429260..429976
location: region:429260-429976:1
so has part: feature:429260-429976:1:exon
subclass of: SO_0000010

position:429260:1
position: 429260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429976:1
position: 429976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429260-429976:1:exon

SOPEG_RS02265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02265
old locus tag: SOPEG_0445
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011070003.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor FliA
translation: MYNHQGRLADDRGMWQQYAPIIRHEALRLQVRLPASVELEDLIQAGMIGLLAAIDSFDATQGASFTTYARSRIRWGMLDELRERDWVPRSVRRNAREIAAAIQRLEQRLGASASEQQIADELGVPLSAYQTMLHETNCSQLFSLDELMAQEAQGTGPALPAGAEQDPFQRLLAGGLRKRVKDEISRLPEREQLLLNLYYQQELNLKEIGEVLGVGESRVSQLHSLAIKRLRARLQESV
SIO_010081: SOPEG_RS02265
subclass of: SO_0000673
so part of: SOPEG_RS02265
location: 429260..429976
location: region:429260-429976:1
so has part: feature:429260-429976:1:exon

WP_257720376.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429260-429976:1:exon

SOPEG_RS02270
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02270
old locus tag: SOPEG_ps0446
pseudo: true
so part of: sequence
location: 430562..432168
location: region:430562-432168:1
so has part: feature:430562-432168:1:exon
subclass of: SO_0000010

position:430562:1
position: 430562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432168:1
position: 432168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430562-432168:1:exon

SOPEG_RS02270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02270
old locus tag: SOPEG_ps0446
inference: COORDINATES: similar to AA sequence:RefSeq:NP_462532.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
SIO_010081: SOPEG_RS02270
subclass of: SO_0000673
so part of: SOPEG_RS02270
location: 430562..432168
location: region:430562-432168:1
so has part: feature:430562-432168:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:430562-432168:1:exon

SOPEG_RS25860
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: dppB
locus tag: SOPEG_RS25860
old locus tag: SOPEG_ps0447
pseudo: true
so part of: sequence
location: 432369..>433358
location: region:432369-433358:1
so has part: feature:432369-433358:1:exon
subclass of: SO_0000010

position:432369:1
position: 432369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433358:1
position: 433358
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432369-433358:1:exon

SOPEG_RS25860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: dppB
locus tag: SOPEG_RS25860
old locus tag: SOPEG_ps0447
inference: COORDINATES: similar to AA sequence:RefSeq:NP_312450.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: dipeptide ABC transporter permease DppB
SIO_010081: SOPEG_RS25860
subclass of: SO_0000673
so part of: SOPEG_RS25860
location: 432369..>433358
location: region:432369-433358:1
so has part: feature:432369-433358:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:432369-433358:1:exon

SOPEG_RS28475
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS28475
old locus tag: SOPEG_ps0448
so part of: sequence
location: 433471..433950
location: region:433471-433950:1
so has part: feature:433471-433950:1:exon
subclass of: SO_0000010

position:433471:1
position: 433471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433950:1
position: 433950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433471-433950:1:exon

SOPEG_RS28475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS28475
old locus tag: SOPEG_ps0448
inference: COORDINATES: protein motif:HMM:NF012738.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease subunit
translation: MRVVDIMLALVLVAIFGPSIVNASLALTFVALPHYVRLTRASVLGEVNRDYVTASRVAGAGTLRQMFVNILPNCLAPLIVQASLGFSNAILDMAALGFLGMGAQPPTPEWGTMLADVLQFAQSAWWVVAFPGFVILLTVLAFNLMGDGLRDALDPKLKQ
SIO_010081: SOPEG_RS28475
subclass of: SO_0000673
so part of: SOPEG_RS28475
location: 433471..433950
location: region:433471-433950:1
so has part: feature:433471-433950:1:exon

WP_162149695.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433471-433950:1:exon

SOPEG_RS02285
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: dppD
locus tag: SOPEG_RS02285
old locus tag: SOPEG_0449
so part of: sequence
location: 433961..434941
location: region:433961-434941:1
so has part: feature:433961-434941:1:exon
subclass of: SO_0000010

position:433961:1
position: 433961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434941:1
position: 434941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433961-434941:1:exon

SOPEG_RS02285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: dppD
locus tag: SOPEG_RS02285
old locus tag: SOPEG_0449
EC number: 7.4.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409928.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0015833 - peptide transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dipeptide ABC transporter ATP-binding protein
translation: MALLSIDKLSVHFGDEGTPFRAVDRISYQVEQGQVLGIVGESGSGKSVSSLAVMGLIDYPGKVMADNLVFNGRDLQKISDNERRQLIGADMAMIFQDPMTSLNSCYTVGFQIIEAIKVHQGGNRRTRRQRAIDLLTLVGIPDPASRLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLDLQQRENMALVLITHDLALVAEAAHHIIVMYAGQVVETGKETEIFRAQRHPYTQALLRAPPEFAADKARLTSLPGTVPGKYDRPSGCLLNPRCPYATDHCRQSEPALRTLPDRQSKCHYPLDDAGRPTR
SIO_010081: SOPEG_RS02285
subclass of: SO_0000673
so part of: SOPEG_RS02285
location: 433961..434941
location: region:433961-434941:1
so has part: feature:433961-434941:1:exon

WP_025244164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433961-434941:1:exon

SOPEG_RS02290
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02290
old locus tag: SOPEG_ps0450
pseudo: true
so part of: sequence
location: 434938..435847
location: region:434938-435847:1
so has part: feature:434938-435847:1:exon
subclass of: SO_0000010

position:434938:1
position: 434938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435847:1
position: 435847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434938-435847:1:exon

SOPEG_RS02290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02290
old locus tag: SOPEG_ps0450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011409929.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
SIO_010081: SOPEG_RS02290
subclass of: SO_0000673
so part of: SOPEG_RS02290
location: 434938..435847
location: region:434938-435847:1
so has part: feature:434938-435847:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:434938-435847:1:exon

SOPEG_RS25865
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS25865
old locus tag: SOPEG_ps0451
pseudo: true
so part of: sequence
location: complement(436507..437730)
location: region:436507-437730:-1
so has part: feature:436507-437730:-1:exon
subclass of: SO_0000010

position:436507:-1
position: 436507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437730:-1
position: 437730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436507-437730:-1:exon

SOPEG_RS25865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS25865
old locus tag: SOPEG_ps0451
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025244073.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ISL3 family transposase
SIO_010081: SOPEG_RS25865
subclass of: SO_0000673
so part of: SOPEG_RS25865
location: complement(436507..437730)
location: region:436507-437730:-1
so has part: feature:436507-437730:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:436507-437730:-1:exon

SOPEG_RS02305
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02305
old locus tag: SOPEG_0453
so part of: sequence
location: 438091..439014
location: region:438091-439014:1
so has part: feature:438091-439014:1:exon
subclass of: SO_0000010

position:438091:1
position: 438091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439014:1
position: 439014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438091-439014:1:exon

SOPEG_RS02305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02305
old locus tag: SOPEG_0453
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDLTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDSIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKVFGEGEWKVRQHGAERRRVWRKLHLAVDSATHEIICADLSLNGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKTLLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS02305
subclass of: SO_0000673
so part of: SOPEG_RS02305
location: 438091..439014
location: region:438091-439014:1
so has part: feature:438091-439014:1:exon

WP_025244166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:438091-439014:1:exon

SOPEG_RS02310
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02310
old locus tag: SOPEG_ps0454
so part of: sequence
location: 439120..439425
location: region:439120-439425:1
so has part: feature:439120-439425:1:exon
subclass of: SO_0000010

position:439120:1
position: 439120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439425:1
position: 439425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439120-439425:1:exon

SOPEG_RS02310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02310
old locus tag: SOPEG_ps0454
inference: COORDINATES: protein motif:HMM:NF012422.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MNYINGKSPVKLTTHLSDNTFTERELEIIFFSYQGLSSKEIALRLGISRRTVENRLCGLYQRANVHNIQQFREFCKDLSFDYYIPESFLQPKIIVIEAVNA
SIO_010081: SOPEG_RS02310
subclass of: SO_0000673
so part of: SOPEG_RS02310
location: 439120..439425
location: region:439120-439425:1
so has part: feature:439120-439425:1:exon

WP_025244167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439120-439425:1:exon

SOPEG_RS02315
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02315
old locus tag: SOPEG_0455
so part of: sequence
location: 440250..441173
location: region:440250-441173:1
so has part: feature:440250-441173:1:exon
subclass of: SO_0000010

position:440250:1
position: 440250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441173:1
position: 441173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440250-441173:1:exon

SOPEG_RS02315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02315
old locus tag: SOPEG_0455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDLTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDSIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPIRGEISHLVIDGTGLKVFGEGEWKVRQHGAERRRVWRKLHLAVDSVTHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVDYHRRSLAETAMFRFKTLLGGHLSLHDYDAQVGKAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS02315
subclass of: SO_0000673
so part of: SOPEG_RS02315
location: 440250..441173
location: region:440250-441173:1
so has part: feature:440250-441173:1:exon

WP_025244168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440250-441173:1:exon

SOPEG_RS25870
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS25870
old locus tag: SOPEG_ps0456
pseudo: true
so part of: sequence
location: 441971..445218
location: region:441971-445218:1
so has part: feature:441971-445218:1:exon
subclass of: SO_0000010

position:441971:1
position: 441971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445218:1
position: 445218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441971-445218:1:exon

SOPEG_RS25870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS25870
old locus tag: SOPEG_ps0456
inference: COORDINATES: similar to AA sequence:RefSeq:NP_415985.1
GO component: GO:0009325 - nitrate reductase complex [Evidence IEA]
GO function: GO:0008940 - nitrate reductase activity [Evidence IEA]
GO process: GO:0009061 - anaerobic respiration [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: nitrate reductase subunit alpha
SIO_010081: SOPEG_RS25870
subclass of: SO_0000673
so part of: SOPEG_RS25870
location: 441971..445218
location: region:441971-445218:1
so has part: feature:441971-445218:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441971-445218:1:exon

SOPEG_RS02330
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: narH
locus tag: SOPEG_RS02330
old locus tag: SOPEG_ps0457
pseudo: true
so part of: sequence
location: 445215..446761
location: region:445215-446761:1
so has part: feature:445215-446761:1:exon
subclass of: SO_0000010

position:445215:1
position: 445215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446761:1
position: 446761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445215-446761:1:exon

SOPEG_RS02330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: narH
locus tag: SOPEG_RS02330
old locus tag: SOPEG_ps0457
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008501747.1
GO component: GO:0009325 - nitrate reductase complex [Evidence IEA]
GO function: GO:0008940 - nitrate reductase activity [Evidence IEA]
GO process: GO:0009061 - anaerobic respiration [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: nitrate reductase subunit beta
SIO_010081: SOPEG_RS02330
subclass of: SO_0000673
so part of: SOPEG_RS02330
location: 445215..446761
location: region:445215-446761:1
so has part: feature:445215-446761:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:445215-446761:1:exon

SOPEG_RS02335
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: narJ
locus tag: SOPEG_RS02335
old locus tag: SOPEG_ps0458
pseudo: true
so part of: sequence
location: 446758..>447129
location: region:446758-447129:1
so has part: feature:446758-447129:1:exon
subclass of: SO_0000010

position:446758:1
position: 446758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447129:1
position: 447129
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446758-447129:1:exon

SOPEG_RS02335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: narJ
locus tag: SOPEG_RS02335
old locus tag: SOPEG_ps0458
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019705698.1
GO function: GO:0051082 - unfolded protein binding [Evidence IEA]
GO process: GO:0051131 - chaperone-mediated protein complex assembly [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: nitrate reductase molybdenum cofactor assembly chaperone
SIO_010081: SOPEG_RS02335
subclass of: SO_0000673
so part of: SOPEG_RS02335
location: 446758..>447129
location: region:446758-447129:1
so has part: feature:446758-447129:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:446758-447129:1:exon

SOPEG_RS23865
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS23865
pseudo: true
so part of: sequence
location: 447198..>447374
location: region:447198-447374:1
so has part: feature:447198-447374:1:exon
subclass of: SO_0000010

position:447198:1
position: 447198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447374:1
position: 447374
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447198-447374:1:exon

SOPEG_RS23865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS23865
inference: COORDINATES: similar to AA sequence:RefSeq:NP_460717.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: respiratory nitrate reductase subunit gamma
SIO_010081: SOPEG_RS23865
subclass of: SO_0000673
so part of: SOPEG_RS23865
location: 447198..>447374
location: region:447198-447374:1
so has part: feature:447198-447374:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:447198-447374:1:exon

SOPEG_RS02345
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: istA
locus tag: SOPEG_RS02345
old locus tag: SOPEG_ps0460
pseudo: true
so part of: sequence
location: 447520..449070
location: region:447520-449070:1
so has part: feature:447520-449070:1:exon
subclass of: SO_0000010

position:447520:1
position: 447520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449070:1
position: 449070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447520-449070:1:exon

SOPEG_RS02345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: istA
locus tag: SOPEG_RS02345
old locus tag: SOPEG_ps0460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025245097.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21 family transposase
SIO_010081: SOPEG_RS02345
subclass of: SO_0000673
so part of: SOPEG_RS02345
location: 447520..449070
location: region:447520-449070:1
so has part: feature:447520-449070:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:447520-449070:1:exon

SOPEG_RS02350
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: istB
locus tag: SOPEG_RS02350
old locus tag: SOPEG_ps0461
pseudo: true
so part of: sequence
location: 449082..449832
location: region:449082-449832:1
so has part: feature:449082-449832:1:exon
subclass of: SO_0000010

position:449082:1
position: 449082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449832:1
position: 449832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449082-449832:1:exon

SOPEG_RS02350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: istB
locus tag: SOPEG_RS02350
old locus tag: SOPEG_ps0461
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025245096.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21-like element ISSoEn3 family helper ATPase IstB
SIO_010081: SOPEG_RS02350
subclass of: SO_0000673
so part of: SOPEG_RS02350
location: 449082..449832
location: region:449082-449832:1
so has part: feature:449082-449832:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:449082-449832:1:exon

SOPEG_RS02355
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02355
so part of: sequence
location: 449913..450146
location: region:449913-450146:1
so has part: feature:449913-450146:1:exon
subclass of: SO_0000010

position:449913:1
position: 449913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450146:1
position: 450146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449913-450146:1:exon

SOPEG_RS02355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02355
inference: COORDINATES: protein motif:HMM:NF014695.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: respiratory nitrate reductase subunit gamma
translation: MSPEQLIGYVGICSILEIFFGHLLGLLTPHWVYQPFLSIAVKQQMAMAAGGVFRIMTLIGGLLLLKRRLTHPRHHPP
SIO_010081: SOPEG_RS02355
subclass of: SO_0000673
so part of: SOPEG_RS02355
location: 449913..450146
location: region:449913-450146:1
so has part: feature:449913-450146:1:exon

WP_025244171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:449913-450146:1:exon

SOPEG_RS26995
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS26995
pseudo: true
so part of: sequence
location: <450352..>450530
location: region:450352-450530:1
so has part: feature:450352-450530:1:exon
subclass of: SO_0000010

position:450352:1
position: 450352
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:450530:1
position: 450530
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450352-450530:1:exon

SOPEG_RS26995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS26995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_032491235.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: SOPEG_RS26995
subclass of: SO_0000673
so part of: SOPEG_RS26995
location: <450352..>450530
location: region:450352-450530:1
so has part: feature:450352-450530:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:450352-450530:1:exon

SOPEG_RS23870
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS23870
old locus tag: SOPEG_ps0463
pseudo: true
so part of: sequence
location: 450923..451841
location: region:450923-451841:1
so has part: feature:450923-451841:1:exon
subclass of: SO_0000010

position:450923:1
position: 450923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451841:1
position: 451841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450923-451841:1:exon

SOPEG_RS23870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS23870
old locus tag: SOPEG_ps0463
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011411000.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
SIO_010081: SOPEG_RS23870
subclass of: SO_0000673
so part of: SOPEG_RS23870
location: 450923..451841
location: region:450923-451841:1
so has part: feature:450923-451841:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:450923-451841:1:exon

SOPEG_RS02370
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02370
old locus tag: SOPEG_ps0464
pseudo: true
so part of: sequence
location: complement(451852..453061)
location: region:451852-453061:-1
so has part: feature:451852-453061:-1:exon
subclass of: SO_0000010

position:451852:-1
position: 451852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453061:-1
position: 453061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451852-453061:-1:exon

SOPEG_RS02370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02370
old locus tag: SOPEG_ps0464
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS256-like element ISSoEn2 family transposase
SIO_010081: SOPEG_RS02370
subclass of: SO_0000673
so part of: SOPEG_RS02370
location: complement(451852..453061)
location: region:451852-453061:-1
so has part: feature:451852-453061:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:451852-453061:-1:exon

SOPEG_RS28170
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS28170
so part of: sequence
location: 453138..453305
location: region:453138-453305:1
so has part: feature:453138-453305:1:exon
subclass of: SO_0000010

position:453138:1
position: 453138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453305:1
position: 453305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453138-453305:1:exon

SOPEG_RS28170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS28170
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGALSKAELMATFSMLSDTEKERLMRFYDQIKKGAREEGEVASEDSLTSERKRAV
SIO_010081: SOPEG_RS28170
subclass of: SO_0000673
so part of: SOPEG_RS28170
location: 453138..453305
location: region:453138-453305:1
so has part: feature:453138-453305:1:exon

WP_158382320.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453138-453305:1:exon

SOPEG_RS02375
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: narI
locus tag: SOPEG_RS02375
pseudo: true
so part of: sequence
location: <453550..453819
location: region:453550-453819:1
so has part: feature:453550-453819:1:exon
subclass of: SO_0000010

position:453550:1
position: 453550
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:453819:1
position: 453819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453550-453819:1:exon

SOPEG_RS02375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: narI
locus tag: SOPEG_RS02375
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005227154.1
GO component: GO:0009325 - nitrate reductase complex [Evidence IEA]
GO function: GO:0008940 - nitrate reductase activity [Evidence IEA]
GO process: GO:0019645 - anaerobic electron transport chain [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: respiratory nitrate reductase subunit gamma
SIO_010081: SOPEG_RS02375
subclass of: SO_0000673
so part of: SOPEG_RS02375
location: <453550..453819
location: region:453550-453819:1
so has part: feature:453550-453819:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:453550-453819:1:exon

SOPEG_RS02380
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02380
old locus tag: SOPEG_ps0465
pseudo: true
so part of: sequence
location: complement(453975..454982)
location: region:453975-454982:-1
so has part: feature:453975-454982:-1:exon
subclass of: SO_0000010

position:453975:-1
position: 453975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454982:-1
position: 454982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453975-454982:-1:exon

SOPEG_RS02380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02380
old locus tag: SOPEG_ps0465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005276647.1
GO function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glycosyl hydrolase family 8
SIO_010081: SOPEG_RS02380
subclass of: SO_0000673
so part of: SOPEG_RS02380
location: complement(453975..454982)
location: region:453975-454982:-1
so has part: feature:453975-454982:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:453975-454982:-1:exon

SOPEG_RS29065
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS29065
old locus tag: SOPEG_ps0466
so part of: sequence
location: complement(455011..455289)
location: region:455011-455289:-1
so has part: feature:455011-455289:-1:exon
subclass of: SO_0000010

position:455011:-1
position: 455011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455289:-1
position: 455289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455011-455289:-1:exon

SOPEG_RS29065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS29065
old locus tag: SOPEG_ps0466
inference: COORDINATES: protein motif:HMM:NF015464.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGEQLACRFPQPAAATVGELEDGLNRLWSCFHWGYVRLTPEATAPRPPGKANRSGGRSGRRLCALAVRSGRAAARRAALAAGQRRWRNDLSL
SIO_010081: SOPEG_RS29065
subclass of: SO_0000673
so part of: SOPEG_RS29065
location: complement(455011..455289)
location: region:455011-455289:-1
so has part: feature:455011-455289:-1:exon

WP_236851758.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:455011-455289:-1:exon

SOPEG_RS02390
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02390
old locus tag: SOPEG_ps0467
so part of: sequence
location: complement(455439..458483)
location: region:455439-458483:-1
so has part: feature:455439-458483:-1:exon
subclass of: SO_0000010

position:455439:-1
position: 455439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458483:-1
position: 458483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455439-458483:-1:exon

SOPEG_RS02390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02390
old locus tag: SOPEG_ps0467
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004873982.1
GO component: GO:0019867 - outer membrane [Evidence IEA]
GO process: GO:0030244 - cellulose biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cellulose synthase subunit BcsC-related outer membrane protein
translation: MKRVAKPIFASWCAADNSPAINALLQQAAYWHDKSHDDLARESLQKVLAVDENNADALYLLALYALQDGNQAQAARWRARLTAVSPNDTRLGSLDSANAVQAIPPEQLDNARRLAASGSAAQAVASYRVLFRDAAPPDSLAVEYYDTLAGIPSARPQAADKADYDRYIQRHPGDSALWQHFQQNDLSGAEQTYRTILSRDAQNKDARLGLYYTLRQENKPRNAQQLLQTLPADERPREMAGNSVDPLRRQAQQALQAGNTQQELARLNKALQKQPTNVWVRLDMVRILQQQGDSARAQGLMSAIAQRGAPVDNLYTAALLASETGRMATAAQWLAWIPEGRRNRAVRDLAQCLQTLGDNTTEVSLVRTNLRQPIHGGIGDYAAQIGVLNQTGLTDEAAAFLNNPAIVAASTPAELSRLRQGAVINQADTLRERGQYAAAYDKLIVALQNDPQDTGLMLAMARLYQSGKMNAQAAKIYNYVLTREPQNTDAREGAVNTALAQGDIARARQLLDGMQGPRSVDRLILEARVAEAQGDHDQAMALLRSAKGRIIGMADTDTDNGAVSLVGGLQSADNPFGDDSRATTPTTTPETRTLTQINDLMNQVREKTATWAEGEVAVRSRDGENGLSNLTEVKAPLTISGSPVDNARLSLTVTPVSLDAGSSSGFANNRFGTGALQQGQRVANAAAGATTSTTTTSTTTGSDGATSTTTNTSTSDSINSGDYVADSSGAQKATGTEVNLALKGERYKVDVGSTPLGTDNDMASWVGGVEWSPRLSNFSQLTFRAERRAVTDSLLAYVGARDAISGKHWGQVTRNGGSVQYAYDDGDIGLYAGLGAYSYLGDNVKSNTGINASSGVYFRPYRADGRELRSGVNLTWMAFDRNLSYFSYGQGGYFSPQNYISLSLPVDYIQTFDDWNLTLGGVIGYQSYNQDKSDYYPHDPDMQAEMASLVANGYADDAYYSGSSEYGVGYNVHAKGVYKINPQMSVGGQLSYDTFGDYSEGSAQLFLKYLLGGQ
SIO_010081: SOPEG_RS02390
subclass of: SO_0000673
so part of: SOPEG_RS02390
location: complement(455439..458483)
location: region:455439-458483:-1
so has part: feature:455439-458483:-1:exon

WP_025244174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:455439-458483:-1:exon

SOPEG_RS29070
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS29070
so part of: sequence
location: complement(458521..458805)
location: region:458521-458805:-1
so has part: feature:458521-458805:-1:exon
subclass of: SO_0000010

position:458521:-1
position: 458521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458805:-1
position: 458805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458521-458805:-1:exon

SOPEG_RS29070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS29070
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAMAARAGNATGILGDVAVINNENGVRSFSVGALFPRGEMPWYMRVLWYANQHIILLALCGLLCALLVGSGVYLLLARHAAKRLANSANPHQDQ
SIO_010081: SOPEG_RS29070
subclass of: SO_0000673
so part of: SOPEG_RS29070
location: complement(458521..458805)
location: region:458521-458805:-1
so has part: feature:458521-458805:-1:exon

WP_051419393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458521-458805:-1:exon

SOPEG_RS30155
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS30155
so part of: sequence
location: complement(458805..458999)
location: region:458805-458999:-1
so has part: feature:458805-458999:-1:exon
subclass of: SO_0000010

position:458999:-1
position: 458999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458805-458999:-1:exon

SOPEG_RS30155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS30155
inference: COORDINATES: protein motif:HMM:NF015149.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0006011 - UDP-glucose metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB
translation: MPPSLLTSNTIKSRIDPDSYIDLSRTYHFGLLPNLSYYVGASFPFTRMADFSQTVMLLPAKSPR
SIO_010081: SOPEG_RS30155
subclass of: SO_0000673
so part of: SOPEG_RS30155
location: complement(458805..458999)
location: region:458805-458999:-1
so has part: feature:458805-458999:-1:exon

WP_051419394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458805-458999:-1:exon

SOPEG_RS02395
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02395
old locus tag: SOPEG_ps0468
so part of: sequence
location: complement(458989..460404)
location: region:458989-460404:-1
so has part: feature:458989-460404:-1:exon
subclass of: SO_0000010

position:458989:-1
position: 458989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460404:-1
position: 460404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458989-460404:-1:exon

SOPEG_RS02395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02395
old locus tag: SOPEG_ps0468
inference: COORDINATES: protein motif:HMM:NF015149.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB
translation: MMVSLAAALLSASVAAAATPANGADQDSAAPLYRLPPLPAGFPLAPMNPIDDETISIEEMGQPNGLTLSGGQLQSGIIFTLAQNQVVTNAHLSLALKVSPALAARDTRLRLMLNGQDLGDIRLNQTASGNNVYRLDVPSAMVVGKNNLSFSVSDDNTLTCERDLTDKYWVTLLPDTHMQLSSQLLDIGRDLSHFPRPLFDPQSMKGSSLAFLFSRTLKPDAVEAASMLASYFGLHSSYRSVDFAVLLDALPAQNGILFGEPEDKIGTLTLPQVTGPTLQVINNPQNPVYKLLLVVGRNGAELRQAAWQLISTPLPAKQDVIQVQEQAIPERQPYDAPRWIDTSRPVYLKELTQDIQSLTASGLYHDGIRIGFRAAPDLFMWDGDHIPVYVGYRFPADSGIDEDHSKLDVTLNGTFLYSLPVNKRGLLKGLWRKLGGDSRQERYTLQLAPYLIYGDNQMQFYFSLRPKPNAP
SIO_010081: SOPEG_RS02395
subclass of: SO_0000673
so part of: SOPEG_RS02395
location: complement(458989..460404)
location: region:458989-460404:-1
so has part: feature:458989-460404:-1:exon

WP_051419395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458989-460404:-1:exon

SOPEG_RS02400
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02400
old locus tag: SOPEG_ps0469
pseudo: true
so part of: sequence
location: complement(460443..>461909)
location: region:460443-461909:-1
so has part: feature:460443-461909:-1:exon
subclass of: SO_0000010

position:460443:-1
position: 460443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461909:-1
position: 461909
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460443-461909:-1:exon

SOPEG_RS02400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02400
old locus tag: SOPEG_ps0469
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017799694.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glycosyltransferase family 2 protein
SIO_010081: SOPEG_RS02400
subclass of: SO_0000673
so part of: SOPEG_RS02400
location: complement(460443..>461909)
location: region:460443-461909:-1
so has part: feature:460443-461909:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:460443-461909:-1:exon

SOPEG_RS02405
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02405
old locus tag: SOPEG_0470
so part of: sequence
location: complement(461965..462888)
location: region:461965-462888:-1
so has part: feature:461965-462888:-1:exon
subclass of: SO_0000010

position:461965:-1
position: 461965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462888:-1
position: 462888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461965-462888:-1:exon

SOPEG_RS02405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02405
old locus tag: SOPEG_0470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDLTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDSIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKIFGEGEWKVRQHGAERRRVWRKLHLAVDSATHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKILLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS02405
subclass of: SO_0000673
so part of: SOPEG_RS02405
location: complement(461965..462888)
location: region:461965-462888:-1
so has part: feature:461965-462888:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:461965-462888:-1:exon

SOPEG_RS02410
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02410
pseudo: true
so part of: sequence
location: complement(<462965..>463180)
location: region:462965-463180:-1
so has part: feature:462965-463180:-1:exon
subclass of: SO_0000010

position:462965:-1
position: 462965
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:463180:-1
position: 463180
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462965-463180:-1:exon

SOPEG_RS02410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02410
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229350.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glycosyltransferase
SIO_010081: SOPEG_RS02410
subclass of: SO_0000673
so part of: SOPEG_RS02410
location: complement(<462965..>463180)
location: region:462965-463180:-1
so has part: feature:462965-463180:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:462965-463180:-1:exon

SOPEG_RS02415
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02415
old locus tag: SOPEG_0471
so part of: sequence
location: complement(463224..464147)
location: region:463224-464147:-1
so has part: feature:463224-464147:-1:exon
subclass of: SO_0000010

position:463224:-1
position: 463224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464147:-1
position: 464147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463224-464147:-1:exon

SOPEG_RS02415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02415
old locus tag: SOPEG_0471
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDMTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDAIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKIFGEGEWKVRQHGAERRRVWRKLHLAVDSATHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKTLLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS02415
subclass of: SO_0000673
so part of: SOPEG_RS02415
location: complement(463224..464147)
location: region:463224-464147:-1
so has part: feature:463224-464147:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:463224-464147:-1:exon

SOPEG_RS02420
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02420
old locus tag: SOPEG_0473
so part of: sequence
location: complement(464430..465353)
location: region:464430-465353:-1
so has part: feature:464430-465353:-1:exon
subclass of: SO_0000010

position:464430:-1
position: 464430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465353:-1
position: 465353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464430-465353:-1:exon

SOPEG_RS02420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02420
old locus tag: SOPEG_0473
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDLTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDSIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKIFGEGEWKVRQHGAERRRVWRKLHLAVDSATHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKTLLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS02420
subclass of: SO_0000673
so part of: SOPEG_RS02420
location: complement(464430..465353)
location: region:464430-465353:-1
so has part: feature:464430-465353:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:464430-465353:-1:exon

SOPEG_RS02425
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02425
old locus tag: SOPEG_ps0474
pseudo: true
so part of: sequence
location: complement(<465431..465901)
location: region:465431-465901:-1
so has part: feature:465431-465901:-1:exon
subclass of: SO_0000010

position:465431:-1
position: 465431
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:465901:-1
position: 465901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465431-465901:-1:exon

SOPEG_RS02425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02425
old locus tag: SOPEG_ps0474
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410900.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: SOPEG_RS02425
subclass of: SO_0000673
so part of: SOPEG_RS02425
location: complement(<465431..465901)
location: region:465431-465901:-1
so has part: feature:465431-465901:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:465431-465901:-1:exon

SOPEG_RS02430
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02430
old locus tag: SOPEG_ps0475
so part of: sequence
location: complement(466415..466879)
location: region:466415-466879:-1
so has part: feature:466415-466879:-1:exon
subclass of: SO_0000010

position:466415:-1
position: 466415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466879:-1
position: 466879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466415-466879:-1:exon

SOPEG_RS02430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02430
old locus tag: SOPEG_ps0475
inference: COORDINATES: protein motif:HMM:NF014218.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytosine permease
translation: MIHTAGWIGVLTVILSAIKVNDTNLYSASINIIGFLEMLTGKRFNYTAITLLIGLLGTLLSLSGVLDAFIPFLMALGLIFPPIAGVILVDYYILRTSRHHLERSRKLGKLPNDVSMPITHSVTIISCALGSTVGVYLKYGIPSVNSIFAAGIGY
SIO_010081: SOPEG_RS02430
subclass of: SO_0000673
so part of: SOPEG_RS02430
location: complement(466415..466879)
location: region:466415-466879:-1
so has part: feature:466415-466879:-1:exon

WP_025244178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:466415-466879:-1:exon

SOPEG_RS02435
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02435
old locus tag: SOPEG_ps0476
pseudo: true
so part of: sequence
location: 466955..468164
location: region:466955-468164:1
so has part: feature:466955-468164:1:exon
subclass of: SO_0000010

position:466955:1
position: 466955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468164:1
position: 468164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466955-468164:1:exon

SOPEG_RS02435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02435
old locus tag: SOPEG_ps0476
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS256-like element ISSoEn2 family transposase
SIO_010081: SOPEG_RS02435
subclass of: SO_0000673
so part of: SOPEG_RS02435
location: 466955..468164
location: region:466955-468164:1
so has part: feature:466955-468164:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:466955-468164:1:exon

SOPEG_RS29075
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS29075
pseudo: true
so part of: sequence
location: complement(<468201..>468365)
location: region:468201-468365:-1
so has part: feature:468201-468365:-1:exon
subclass of: SO_0000010

position:468201:-1
position: 468201
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:468365:-1
position: 468365
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468201-468365:-1:exon

SOPEG_RS29075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS29075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014914325.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: cytosine permease
SIO_010081: SOPEG_RS29075
subclass of: SO_0000673
so part of: SOPEG_RS29075
location: complement(<468201..>468365)
location: region:468201-468365:-1
so has part: feature:468201-468365:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:468201-468365:-1:exon

SOPEG_RS23880
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS23880
old locus tag: SOPEG_ps0477
pseudo: true
so part of: sequence
location: 468442..469365
location: region:468442-469365:1
so has part: feature:468442-469365:1:exon
subclass of: SO_0000010

position:468442:1
position: 468442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469365:1
position: 469365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468442-469365:1:exon

SOPEG_RS23880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS23880
old locus tag: SOPEG_ps0477
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
SIO_010081: SOPEG_RS23880
subclass of: SO_0000673
so part of: SOPEG_RS23880
location: 468442..469365
location: region:468442-469365:1
so has part: feature:468442-469365:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:468442-469365:1:exon

SOPEG_RS02450
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02450
pseudo: true
so part of: sequence
location: <469397..469651
location: region:469397-469651:1
so has part: feature:469397-469651:1:exon
subclass of: SO_0000010

position:469397:1
position: 469397
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:469651:1
position: 469651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469397-469651:1:exon

SOPEG_RS02450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02450
inference: COORDINATES: protein motif:HMM:NF014467.2
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tail fiber assembly protein
SIO_010081: SOPEG_RS02450
subclass of: SO_0000673
so part of: SOPEG_RS02450
location: <469397..469651
location: region:469397-469651:1
so has part: feature:469397-469651:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:469397-469651:1:exon

SOPEG_RS02455
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02455
old locus tag: SOPEG_0478
so part of: sequence
location: 469730..470938
location: region:469730-470938:1
so has part: feature:469730-470938:1:exon
subclass of: SO_0000010

position:469730:1
position: 469730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470938:1
position: 470938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469730-470938:1:exon

SOPEG_RS02455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02455
old locus tag: SOPEG_0478
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256-like element ISSoEn2 family transposase
translation: MDEKQLQALANELAKNLKTPEDLSHFDRLLKKISVEAALNAEMTHHLGYDKNQPKPGTNARNGYSTKTVTTGDGPLALRTPRDRDGSFEPQLVKKNQTRITGMDNQILSLYAKGMTTREIAAAFKELYDADVSPALVSKVTDAVMEQVVEWQNRPLDAVYPIVYLDCIVLKVRQDSRIINKSVFLALGINIEGQKELLGMWLAENEGAKFWLNVLTELKNRGLNDILIACVDGLKGFPDAINAVYPEARLQLCIVHMVRNSLRFVSWKDYKAVTRDLKAIYQAPTEEAGLQALEAFSSAWDIRYPQISRSWQANWANLATFFAYPTDIRKVIYTTNAIESLNSVIRHAIKKRKVFPTDDAVKKVVWLAIQAASQKWTMPLRDWRMAMSRFIIEFGDRLDGHF
SIO_010081: SOPEG_RS02455
subclass of: SO_0000673
so part of: SOPEG_RS02455
location: 469730..470938
location: region:469730-470938:1
so has part: feature:469730-470938:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:469730-470938:1:exon

SOPEG_RS02460
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02460
old locus tag: SOPEG_0479
so part of: sequence
location: 471039..471962
location: region:471039-471962:1
so has part: feature:471039-471962:1:exon
subclass of: SO_0000010

position:471039:1
position: 471039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471962:1
position: 471962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471039-471962:1:exon

SOPEG_RS02460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02460
old locus tag: SOPEG_0479
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element ISSoEn1 family transposase
translation: MAKQKFKITNWPAYNNALRQRGDLTVWLDESAIAAWTESTPPEHRGRPLHYTDMAITTVLMIKRVFNLSLRALQGFVDSIFKLMGLSLRCPDYSLVSRRAKTVDISIKTPTRGEISHLVIDGTGLKVFGEGEWKVRQHGAERRRVWRKLHLAVDSVTHEIICADLSLSGTTDAQALPGLINQTHRKIREASADSAYDTRYCHDALLRKKIKPLIPPRSGAQYWPARYHERNHAVANQHLSGNNDTWKKKVGYHRRSLAETAMFRFKTLLGGHLSLHDYDAQVGEAMAMVKALNRITLLGMPNSVRIM
SIO_010081: SOPEG_RS02460
subclass of: SO_0000673
so part of: SOPEG_RS02460
location: 471039..471962
location: region:471039-471962:1
so has part: feature:471039-471962:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:471039-471962:1:exon

SOPEG_RS02465
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02465
old locus tag: SOPEG_ps0480
pseudo: true
so part of: sequence
location: 472327..473072
location: region:472327-473072:1
so has part: feature:472327-473072:1:exon
subclass of: SO_0000010

position:472327:1
position: 472327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473072:1
position: 473072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472327-473072:1:exon

SOPEG_RS02465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02465
old locus tag: SOPEG_ps0480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016192697.1
GO function: GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO process: GO:0032775 - DNA methylation on adenine [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA adenine methylase
SIO_010081: SOPEG_RS02465
subclass of: SO_0000673
so part of: SOPEG_RS02465
location: 472327..473072
location: region:472327-473072:1
so has part: feature:472327-473072:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:472327-473072:1:exon

SOPEG_RS02470
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02470
old locus tag: SOPEG_0481
so part of: sequence
location: complement(473475..473843)
location: region:473475-473843:-1
so has part: feature:473475-473843:-1:exon
subclass of: SO_0000010

position:473475:-1
position: 473475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473843:-1
position: 473843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473475-473843:-1:exon

SOPEG_RS02470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02470
old locus tag: SOPEG_0481
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013357165.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YbgS-like family protein
translation: MQTNISKKMAMLFLTTAMTLGSGAVLAAPDTGSNAGGSDGGVPELQNNAPNSVDNKDINNSSTNTNTIGTTTGTDASGLNKTEQHKNTMCKDGRCPDVNKKVETGTTGTGSPDGTKTDGTTQ
SIO_010081: SOPEG_RS02470
subclass of: SO_0000673
so part of: SOPEG_RS02470
location: complement(473475..473843)
location: region:473475-473843:-1
so has part: feature:473475-473843:-1:exon

WP_038468103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:473475-473843:-1:exon

SOPEG_RS02475
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: aroG
locus tag: SOPEG_RS02475
old locus tag: SOPEG_ps0482
pseudo: true
so part of: sequence
location: 474135..475186
location: region:474135-475186:1
so has part: feature:474135-475186:1:exon
subclass of: SO_0000010

position:474135:1
position: 474135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475186:1
position: 475186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474135-475186:1:exon

SOPEG_RS02475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: aroG
locus tag: SOPEG_RS02475
old locus tag: SOPEG_ps0482
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015839534.1
GO function: GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO process: GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 3-deoxy-7-phosphoheptulonate synthase AroG
SIO_010081: SOPEG_RS02475
subclass of: SO_0000673
so part of: SOPEG_RS02475
location: 474135..475186
location: region:474135-475186:1
so has part: feature:474135-475186:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:474135-475186:1:exon

SOPEG_RS02480
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: gpmA
locus tag: SOPEG_RS02480
old locus tag: SOPEG_0483
so part of: sequence
location: complement(475253..476005)
location: region:475253-476005:-1
so has part: feature:475253-476005:-1:exon
subclass of: SO_0000010

position:475253:-1
position: 475253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476005:-1
position: 476005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475253-476005:-1:exon

SOPEG_RS02480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: gpmA
locus tag: SOPEG_RS02480
old locus tag: SOPEG_0483
EC number: 5.4.2.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1
GO function: GO:0004619 - phosphoglycerate mutase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
translation: MAVTKLVLIRHGESQWNNENRFTGWTDVDLSDKGRTEAKQAGQVLKAEGYVFDFAYTSVLKRAIHTLWGVLDELDQPWLPVEKSWRLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFAITPPELTREDERFPGHDARYSNLTAAELPTTESLALTIDRVIPYWNETILPRMKSGERIIIAAHGNSIRAMVKFLDNLNEEEILELNIPTGVPLVYEFDDNMKPIKHYYLGNADEIAAKAAVVANQGKAK
SIO_010081: SOPEG_RS02480
subclass of: SO_0000673
so part of: SOPEG_RS02480
location: complement(475253..476005)
location: region:475253-476005:-1
so has part: feature:475253-476005:-1:exon

WP_025244183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:475253-476005:-1:exon

SOPEG_RS30350
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: galK
locus tag: SOPEG_RS30350
old locus tag: SOPEG_0484
so part of: sequence
location: complement(476126..477811)
location: region:476126-477811:-1
so has part: feature:476126-477811:-1:exon
subclass of: SO_0000010

position:476126:-1
position: 476126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477811:-1
position: 477811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476126-477811:-1:exon

SOPEG_RS30350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: galK
locus tag: SOPEG_RS30350
old locus tag: SOPEG_0484
EC number: 2.7.1.6
inference: COORDINATES: protein motif:HMM:TIGR00131.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004335 - galactokinase activity [Evidence IEA]
GO process: GO:0046835 - carbohydrate phosphorylation [Evidence IEA]; GO:0006012 - galactose metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: galactokinase
translation: MSLLNTTETVFRDAFGYDATLTVKTPGRVNLIGEHTDYNDGFVLPCAIDYETVISCARRDNRKIRVIAVDYDRQHDIFSLDEPILSQADQQWSNYVRGVVKHLQRRDGRFGGADLVISGNVPQRAGLSSSAALEVAVGKALQSLYHLSVDNVALALNGQEAENQFVGCNCGIMDQLISALGKDNHALLIDSRTLGTRAVPMPDNVAVVIVNSNVKRGLVDSEYNARREQCETGARFFAVEKLRDVALEQFEAVAHELDDMVTKRVRHVLSENARTLAAADALAADDLRLMGRLMAESHASMRDDFEITVPAIDTLGTIIKGEIGEAGGVRMTGGGFGGCVVALVPADGDQGYPGNLVADVRYTVTEDNALQIDYHATVDKPCPVNLTNHGYFHLDGANSDIRQQRLQIMANQYLPVDSEGIPCADPTDVDNTGMDFRQPKTIAADFLRDRNQQRMKGYDHGYLLYPGLSSAEEPAARLWSADGEVQMEVFTTAPALQLYTGNFLAGTPARQGDEYLNYSGVTLESEFLPDSPHHPEWPQPACLLKSTEAYASQTRYRFLAL
SIO_010081: SOPEG_RS30350
subclass of: SO_0000673
so part of: SOPEG_RS30350
location: complement(476126..477811)
location: region:476126-477811:-1
so has part: feature:476126-477811:-1:exon

WP_025244184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:476126-477811:-1:exon

SOPEG_RS02490
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: galT
locus tag: SOPEG_RS02490
old locus tag: SOPEG_ps0485
so part of: sequence
location: complement(477808..478641)
location: region:477808-478641:-1
so has part: feature:477808-478641:-1:exon
subclass of: SO_0000010

position:477808:-1
position: 477808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478641:-1
position: 478641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477808-478641:-1:exon

SOPEG_RS02490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: galT
locus tag: SOPEG_RS02490
old locus tag: SOPEG_ps0485
EC number: 2.7.7.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004713384.1
GO function: GO:0008108 - UDP-glucose:hexose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO process: GO:0006012 - galactose metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: galactose-1-phosphate uridylyltransferase
translation: MQPFNPVDHPHRRYNPLTGQWILVSPHRAKRPWQGQQEMPSAQTLPAHDPDCYLCPGNTRITGDRNPDYRTTHVFTNDFAALIPDTPDAPPSDDPLFRSQSARGTSRVICFSPDHSKTLPELSLPALEAVIAAWRDQSAELGKTYPWVQVFENKGAAMGCSNPHPHGQIWSNSFLPNEAEREDRLQREYYRQQGSSLLLNYAARELADGAPFTDGDHAHWQLHAHVYPPLLRSATVRKFMVGYEMLAETQRDLTAEQAAERLRAVSENYFRQSGASI
SIO_010081: SOPEG_RS02490
subclass of: SO_0000673
so part of: SOPEG_RS02490
location: complement(477808..478641)
location: region:477808-478641:-1
so has part: feature:477808-478641:-1:exon

WP_025244185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477808-478641:-1:exon

SOPEG_RS02495
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: galE
locus tag: SOPEG_RS02495
old locus tag: SOPEG_0486
so part of: sequence
location: complement(478684..479661)
location: region:478684-479661:-1
so has part: feature:478684-479661:-1:exon
subclass of: SO_0000010

position:478684:-1
position: 478684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479661:-1
position: 479661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478684-479661:-1:exon

SOPEG_RS02495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: galE
locus tag: SOPEG_RS02495
old locus tag: SOPEG_0486
EC number: 5.1.3.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016941918.1
GO function: GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO process: GO:0006012 - galactose metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-glucose 4-epimerase GalE
translation: MSVLVTGGYIGSHTCLQLIAAGITPVIVDNLCNSKSSVVATLGRLSGHTPAFYQGDIRDRQLLAKIFAEHDIEAVIHFAGLKAVGESVNLPIDYYDNNVYGTLALVEAMREAGVVNLIFSSSATVYGVQPVTPYDESLPTGHPASPYGRSKLMVEQILKDLQHADPRWSISLLRYFNPVGAHPSGEMGEDPQGMPNNLMPFIAQVAVGRRPSLAIYGNDFPTPDGTGVRDYIHVLDLADGHLAELTTLRDRPGVHIYNLGSSKGHSVLEVVEAFSQACGKPLPYHFAPRRDGDLAAYWAASEKAARELNWRVTRTLEDTVRNTWR
SIO_010081: SOPEG_RS02495
subclass of: SO_0000673
so part of: SOPEG_RS02495
location: complement(478684..479661)
location: region:478684-479661:-1
so has part: feature:478684-479661:-1:exon

WP_038468106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:478684-479661:-1:exon

SOPEG_RS02500
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: modF
locus tag: SOPEG_RS02500
old locus tag: SOPEG_0487
so part of: sequence
location: complement(479955..481415)
location: region:479955-481415:-1
so has part: feature:479955-481415:-1:exon
subclass of: SO_0000010

position:479955:-1
position: 479955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481415:-1
position: 481415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479955-481415:-1:exon

SOPEG_RS02500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: modF
locus tag: SOPEG_RS02500
old locus tag: SOPEG_0487
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012005729.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdate ABC transporter ATP-binding protein ModF
translation: MSSLQISQGSFRLNDTRVLTLNDVSIATGQSWAFVGANGSGKSALARALAEDLTLLAGERRTDYRRIARLSLEQVQRLVEEEWQRANTDLLSPGEDDTGSTAAEIIQQHHHDDARCQILADQFGISQLLTRRFKYLSTGESRKVLLCQALMARPDLLILDEPFDGLDVASRKQLSERLAGLADNACTLVLILNRFEDIPDYIDRVGILVDCALTCTGSRQSLLVAQLAHLESLQDLALPETDSPQQQAALPADQPLITLRDGVVSYQDRPILHHLDWQVAPSQHWQIVGPNGAGKSTLLSLVTGDHPQGYSNDLTLFGRRRGSGETIWDIKRHIGYVSSSLHLDYRVSASPRSVILSGFFDSIGVYQSPSERQQQLTRQWLRLLGLESQADAAFHGLSWGQQRLTLIARALVKHPALLILDEPLQGLDPLNRQLVRRWIDVLIGQGSTQLLFVSHHAEDAPECITHRLTFVPDGERYRYQLETLDA
SIO_010081: SOPEG_RS02500
subclass of: SO_0000673
so part of: SOPEG_RS02500
location: complement(479955..481415)
location: region:479955-481415:-1
so has part: feature:479955-481415:-1:exon

WP_025244186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:479955-481415:-1:exon

SOPEG_RS02505
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: modE
locus tag: SOPEG_RS02505
old locus tag: SOPEG_ps0488
pseudo: true
so part of: sequence
location: complement(481472..482268)
location: region:481472-482268:-1
so has part: feature:481472-482268:-1:exon
subclass of: SO_0000010

position:481472:-1
position: 481472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482268:-1
position: 482268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481472-482268:-1:exon

SOPEG_RS02505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: modE
locus tag: SOPEG_RS02505
old locus tag: SOPEG_ps0488
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007373937.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]
GO process: GO:0015689 - molybdate ion transport [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: molybdenum-dependent transcriptional regulator
SIO_010081: SOPEG_RS02505
subclass of: SO_0000673
so part of: SOPEG_RS02505
location: complement(481472..482268)
location: region:481472-482268:-1
so has part: feature:481472-482268:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:481472-482268:-1:exon

SOPEG_RS23890
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS23890
so part of: sequence
location: 482432..482608
location: region:482432-482608:1
so has part: feature:482432-482608:1:exon
subclass of: SO_0000010

position:482432:1
position: 482432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482608:1
position: 482608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482432-482608:1:exon

SOPEG_RS23890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS23890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000891513.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO process: GO:1990961 - xenobiotic detoxification by transmembrane export across the plasma membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AcrZ family multidrug efflux pump-associated protein
translation: MLELLESLAIVILMVPVVMAIILGLIYLLGELFNIISKFGQPKQRRQSSDDVKPASRQ
SIO_010081: SOPEG_RS23890
subclass of: SO_0000673
so part of: SOPEG_RS23890
location: 482432..482608
location: region:482432-482608:1
so has part: feature:482432-482608:1:exon

WP_025244187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482432-482608:1:exon

SOPEG_RS02515
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: ddlA
locus tag: SOPEG_RS02515
old locus tag: SOPEG_0490
so part of: sequence
location: 482993..484102
location: region:482993-484102:1
so has part: feature:482993-484102:1:exon
subclass of: SO_0000010

position:482993:1
position: 482993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484102:1
position: 484102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482993-484102:1:exon

SOPEG_RS02515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: ddlA
locus tag: SOPEG_RS02515
old locus tag: SOPEG_0490
EC number: 6.3.2.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410760.1
GO function: GO:0008716 - D-alanine-D-alanine ligase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-alanine--D-alanine ligase
translation: MEPRESGKLRVAVLFGGQSTEHEVSLRSSLNVIRAIDRQRYDLALIGVDKHGRWTLCDEQDYLLNPDDPAAIRLAPARRYLAVVPGQQRAQLIDAANGQPLPSIDVAFSVLHGASGEDGSVQGLLRVLNIPYAGPDVLGSAVCMDKDMTKCVLRDAGVPVTPSVTLLRTGDAAPDFDAIVSQLGLPLFIKPASQGSSVGVSKVTDRATFDAALALAFRYDAKVLVEQTITGREIETAVLGNDSPEVSVCGEILANDEFYAYDTKYLKGAQAGLVIPAPLAAPVADAIRQTARQAYLALGCSVMARVDFFLTEQGEILLNEVNTLPGFTSISMYPKLWEASGLDYPALVERLITLALARARAASLSQTER
SIO_010081: SOPEG_RS02515
subclass of: SO_0000673
so part of: SOPEG_RS02515
location: 482993..484102
location: region:482993-484102:1
so has part: feature:482993-484102:1:exon

WP_025244188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482993-484102:1:exon

SOPEG_RS02520
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02520
old locus tag: SOPEG_ps0491
pseudo: true
so part of: sequence
location: complement(484232..485052)
location: region:484232-485052:-1
so has part: feature:484232-485052:-1:exon
subclass of: SO_0000010

position:484232:-1
position: 484232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485052:-1
position: 485052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484232-485052:-1:exon

SOPEG_RS02520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02520
old locus tag: SOPEG_ps0491
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004713393.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: pyridoxal phosphatase
SIO_010081: SOPEG_RS02520
subclass of: SO_0000673
so part of: SOPEG_RS02520
location: complement(484232..485052)
location: region:484232-485052:-1
so has part: feature:484232-485052:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:484232-485052:-1:exon

SOPEG_RS02525
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: pgl
locus tag: SOPEG_RS02525
old locus tag: SOPEG_0492
so part of: sequence
location: 485252..486241
location: region:485252-486241:1
so has part: feature:485252-486241:1:exon
subclass of: SO_0000010

position:485252:1
position: 485252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486241:1
position: 486241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485252-486241:1:exon

SOPEG_RS02525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: pgl
locus tag: SOPEG_RS02525
old locus tag: SOPEG_0492
EC number: 3.1.1.31
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016928695.1
GO function: GO:0017057 - 6-phosphogluconolactonase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 6-phosphogluconolactonase
translation: MKHIVYVASPESQQIHVWQMDDQGALTLLQVVDTPGQGQPMAIHPANTHLYIGVRPAFGVVSYRIDERGLLTEAGMAPLPGGPTQLTTDLQGTTLYSVSYSGSCLSVSPIDEQGIVGALQQTLKGLTHCHSANVDTTNQELWVPCLQEDRIRRYGIGAAGRLTPLTPAALDSVAGPRHMAFHHGGDYAYAINELSGTVNVIAIDAAGAGPRIVQTLDIMPAGFSDTRWAADIHITPDGRWLYCCDRTASVISRFAVTEDGGVLRLLGHQATETQPRGFNIDSQGRFLVAAGQKSHHIAVYAIEGQSGELAPLARYAVGQGPMWVSILAR
SIO_010081: SOPEG_RS02525
subclass of: SO_0000673
so part of: SOPEG_RS02525
location: 485252..486241
location: region:485252-486241:1
so has part: feature:485252-486241:1:exon

WP_025244189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:485252-486241:1:exon

SOPEG_RS02530
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02530
old locus tag: SOPEG_ps0493
pseudo: true
so part of: sequence
location: complement(486327..486832)
location: region:486327-486832:-1
so has part: feature:486327-486832:-1:exon
subclass of: SO_0000010

position:486327:-1
position: 486327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486832:-1
position: 486832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486327-486832:-1:exon

SOPEG_RS02530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02530
old locus tag: SOPEG_ps0493
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015671394.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: YbhB/YbcL family Raf kinase inhibitor-like protein
SIO_010081: SOPEG_RS02530
subclass of: SO_0000673
so part of: SOPEG_RS02530
location: complement(486327..486832)
location: region:486327-486832:-1
so has part: feature:486327-486832:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:486327-486832:-1:exon

SOPEG_RS02535
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02535
old locus tag: SOPEG_0494
so part of: sequence
location: complement(486912..487535)
location: region:486912-487535:-1
so has part: feature:486912-487535:-1:exon
subclass of: SO_0000010

position:486912:-1
position: 486912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487535:-1
position: 487535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486912-487535:-1:exon

SOPEG_RS02535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02535
old locus tag: SOPEG_0494
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014729283.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type 1 glutamine amidotransferase domain-containing protein
translation: MKVAMILTSHDRLCNTGKQTGFWLEELVAPYYTLHDAGVEITLASPQGGQPPLDPKSDEPDAQTQDTERFHTDRAAQQALAATVRVDTLRAEDFDAVFYPGGHGPPWDLAEDPHSIALIEQTFADGKPVAAVCHAPGVLRHAKKPDGTPLVAGKRVTGFTNSEEQGVQLTKVVPFLVEDELRRLGGQFERTDDWQSYSVTDGHLVTG
SIO_010081: SOPEG_RS02535
subclass of: SO_0000673
so part of: SOPEG_RS02535
location: complement(486912..487535)
location: region:486912-487535:-1
so has part: feature:486912-487535:-1:exon

WP_051419397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:486912-487535:-1:exon

SOPEG_RS02540
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: bioA
locus tag: SOPEG_RS02540
old locus tag: SOPEG_ps0495
pseudo: true
so part of: sequence
location: complement(487680..488910)
location: region:487680-488910:-1
so has part: feature:487680-488910:-1:exon
subclass of: SO_0000010

position:487680:-1
position: 487680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488910:-1
position: 488910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487680-488910:-1:exon

SOPEG_RS02540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: bioA
locus tag: SOPEG_RS02540
old locus tag: SOPEG_ps0495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410763.1
GO function: GO:0004015 - adenosylmethionine-8-amino-7-oxononanoate transaminase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0009102 - biotin biosynthetic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: adenosylmethionine--8-amino-7-oxononanoate transaminase
SIO_010081: SOPEG_RS02540
subclass of: SO_0000673
so part of: SOPEG_RS02540
location: complement(487680..488910)
location: region:487680-488910:-1
so has part: feature:487680-488910:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:487680-488910:-1:exon

SOPEG_RS02545
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: bioB
locus tag: SOPEG_RS02545
old locus tag: SOPEG_ps0496
so part of: sequence
location: 489014..489868
location: region:489014-489868:1
so has part: feature:489014-489868:1:exon
subclass of: SO_0000010

position:489014:1
position: 489014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489868:1
position: 489868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489014-489868:1:exon

SOPEG_RS02545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: bioB
locus tag: SOPEG_RS02545
old locus tag: SOPEG_ps0496
EC number: 2.8.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014888763.1
GO function: GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004076 - biotin synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO process: GO:0009102 - biotin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: biotin synthase BioB
translation: MSTSQRWTLAQANALFDKPFLDLLFEAQQMHCQHFTPGEVQVSTLLSIKTGACPEDCKYCPQSARYHTGLESERLMQAQRLAEAVLDFYNHNLDTSSEFYGSIVTTRSYQDRLDTLSKVRQAGIKVCSGGIVGLGEDIRDRAGLLVQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPCSHVRLSAGREQMNEQTQALCFMAGANSVFYGCKLLTTPNPEEDRDMALFRKLGINIERRAASEGDVEQQAQLTGQLLAADTPQYYNAAR
SIO_010081: SOPEG_RS02545
subclass of: SO_0000673
so part of: SOPEG_RS02545
location: 489014..489868
location: region:489014-489868:1
so has part: feature:489014-489868:1:exon

WP_025244190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489014-489868:1:exon

SOPEG_RS02550
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02550
old locus tag: SOPEG_ps0497
pseudo: true
so part of: sequence
location: 489883..490652
location: region:489883-490652:1
so has part: feature:489883-490652:1:exon
subclass of: SO_0000010

position:489883:1
position: 489883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490652:1
position: 490652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489883-490652:1:exon

SOPEG_RS02550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02550
old locus tag: SOPEG_ps0497
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004965702.1
GO function: GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
SIO_010081: SOPEG_RS02550
subclass of: SO_0000673
so part of: SOPEG_RS02550
location: 489883..490652
location: region:489883-490652:1
so has part: feature:489883-490652:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:489883-490652:1:exon

SOPEG_RS02555
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: bioC
locus tag: SOPEG_RS02555
old locus tag: SOPEG_ps0498
pseudo: true
so part of: sequence
location: 490621..491386
location: region:490621-491386:1
so has part: feature:490621-491386:1:exon
subclass of: SO_0000010

position:490621:1
position: 490621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491386:1
position: 491386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490621-491386:1:exon

SOPEG_RS02555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: bioC
locus tag: SOPEG_RS02555
old locus tag: SOPEG_ps0498
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410766.1
GO function: GO:0008171 - O-methyltransferase activity [Evidence IEA]
GO process: GO:0009102 - biotin biosynthetic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: malonyl-ACP O-methyltransferase BioC
SIO_010081: SOPEG_RS02555
subclass of: SO_0000673
so part of: SOPEG_RS02555
location: 490621..491386
location: region:490621-491386:1
so has part: feature:490621-491386:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:490621-491386:1:exon

SOPEG_RS02560
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: bioD
locus tag: SOPEG_RS02560
old locus tag: SOPEG_ps0499
pseudo: true
so part of: sequence
location: 491379..492071
location: region:491379-492071:1
so has part: feature:491379-492071:1:exon
subclass of: SO_0000010

position:491379:1
position: 491379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492071:1
position: 492071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491379-492071:1:exon

SOPEG_RS02560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: bioD
locus tag: SOPEG_RS02560
old locus tag: SOPEG_ps0499
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014887784.1
GO function: GO:0004141 - dethiobiotin synthase activity [Evidence IEA]
GO process: GO:0009102 - biotin biosynthetic process [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: dethiobiotin synthase
SIO_010081: SOPEG_RS02560
subclass of: SO_0000673
so part of: SOPEG_RS02560
location: 491379..492071
location: region:491379-492071:1
so has part: feature:491379-492071:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:491379-492071:1:exon

SOPEG_RS02565
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02565
old locus tag: SOPEG_ps0500
pseudo: true
so part of: sequence
location: complement(492218..492821)
location: region:492218-492821:-1
so has part: feature:492218-492821:-1:exon
subclass of: SO_0000010

position:492218:-1
position: 492218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:492821:-1
position: 492821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492218-492821:-1:exon

SOPEG_RS02565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02565
old locus tag: SOPEG_ps0500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005158946.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
SIO_010081: SOPEG_RS02565
subclass of: SO_0000673
so part of: SOPEG_RS02565
location: complement(492218..492821)
location: region:492218-492821:-1
so has part: feature:492218-492821:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:492218-492821:-1:exon

SOPEG_RS02570
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02570
old locus tag: SOPEG_ps0501
pseudo: true
so part of: sequence
location: 493651..494871
location: region:493651-494871:1
so has part: feature:493651-494871:1:exon
subclass of: SO_0000010

position:493651:1
position: 493651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494871:1
position: 494871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493651-494871:1:exon

SOPEG_RS02570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02570
old locus tag: SOPEG_ps0501
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025244073.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ISL3 family transposase
SIO_010081: SOPEG_RS02570
subclass of: SO_0000673
so part of: SOPEG_RS02570
location: 493651..494871
location: region:493651-494871:1
so has part: feature:493651-494871:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:493651-494871:1:exon

SOPEG_RS27010
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS27010
so part of: sequence
location: complement(494876..495208)
location: region:494876-495208:-1
so has part: feature:494876-495208:-1:exon
subclass of: SO_0000010

position:494876:-1
position: 494876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:495208:-1
position: 495208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494876-495208:-1:exon

SOPEG_RS27010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS27010
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNVFTFKGITFMSCLKKYTYTPFILLLHGVAASASPNMMYNTDKKDYSLSPEVMPKLSWEKSKSQVDKTQYCLTPSDPGCSNMWQKEKEKENDERIQHHQQKKFYNSLK
SIO_010081: SOPEG_RS27010
subclass of: SO_0000673
so part of: SOPEG_RS27010
location: complement(494876..495208)
location: region:494876-495208:-1
so has part: feature:494876-495208:-1:exon

WP_158382322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494876-495208:-1:exon

SOPEG_RS02575
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: uvrB
locus tag: SOPEG_RS02575
old locus tag: SOPEG_0502
so part of: sequence
location: 495395..497404
location: region:495395-497404:1
so has part: feature:495395-497404:1:exon
subclass of: SO_0000010

position:495395:1
position: 495395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497404:1
position: 497404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495395-497404:1:exon

SOPEG_RS02575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: uvrB
locus tag: SOPEG_RS02575
old locus tag: SOPEG_0502
inference: COORDINATES: similar to AA sequence:RefSeq:NP_459776.1
GO component: GO:0009380 - excinuclease repair complex [Evidence IEA]
GO function: GO:0009381 - excinuclease ABC activity [Evidence IEA]
GO process: GO:0006289 - nucleotide-excision repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: excinuclease ABC subunit UvrB
translation: MSKAFKLVSSFKPSGDQPEAILCLEEGLEDGLAHQTLLGVTGSGKTFTVANVIADLNRPTMVLAPNKTLAAQLYGEMKAFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKALLERRDVIVVASVSAIYGLGDPDAYLKMMLHLTRGMIVSQRRIVNRLSELQYTRNDQAFQRGTFRVRGEVIDIFPAESDEVALRVELFDDGVERLSLFDPLTGHVDQEVPRYTIYPKTHYVTPRERLVQAMEDIKVELAERRQMLLANGKLLEEQRLSQRTAFDLEMMNELGYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPMKFEEFAALAPQTIYVSATPGPYELEMCGNEVIDQLVRPTGLLDPQIEVRPVTTQVDDLLSEIRRRVQVNERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIETVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLNGKAILYGDKITPSMARAIEETERRHEKQHAYNLANGIVPQALNKQIADIMELGQSPAHAKHKKRKTMEAAAKYGDLTPKALEQKIRELETRMQQHAQNLEFEEAASVRDQIHALREQFIAVS
SIO_010081: SOPEG_RS02575
subclass of: SO_0000673
so part of: SOPEG_RS02575
location: 495395..497404
location: region:495395-497404:1
so has part: feature:495395-497404:1:exon

WP_025244191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:495395-497404:1:exon

SOPEG_RS02580
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: yvcK
locus tag: SOPEG_RS02580
old locus tag: SOPEG_0503
so part of: sequence
location: complement(497503..498399)
location: region:497503-498399:-1
so has part: feature:497503-498399:-1:exon
subclass of: SO_0000010

position:497503:-1
position: 497503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498399:-1
position: 498399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497503-498399:-1:exon

SOPEG_RS02580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: yvcK
locus tag: SOPEG_RS02580
old locus tag: SOPEG_0503
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014831146.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uridine diphosphate-N-acetylglucosamine-binding protein YvcK
translation: MRNRTLADLGQVVALGGGHGLGRVMSALSFLGSRLTGIVTTTDNGGSSGRIRQSEGGIAWGDTRNCLNQLIASAMFEYRFGGQGELAGHNLGNLMLKALDNLSVRPLEAINLIRNLLKVNASLIPMSEQPVDLQATALSGYTVYGEVAIDRLNELPVQLKLTAPVPATREALLANAGADLIIIGPGSFLTSLMPLLLVEDLTLALRRTPALMIYLDNLGRELSVAAANMTLAQKVRMMEQAIGREKVIDGVIVGPGTATDGLAERIIIQRPLAADDGPHHHDRGLLRQALDLALQSLG
SIO_010081: SOPEG_RS02580
subclass of: SO_0000673
so part of: SOPEG_RS02580
location: complement(497503..498399)
location: region:497503-498399:-1
so has part: feature:497503-498399:-1:exon

WP_025244192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:497503-498399:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 2342
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01055
inference: COORDINATES: profile:INFERNAL:1.1.1
note: molybdenum cofactor riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: molybdenum cofactor
so part of: sequence
location: 498650..498791
location: region:498650-498791:1
so has part: feature:498650-498791:1:region

position:498650:1
position: 498650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498791:1
position: 498791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498650-498791:1:region

SOPEG_RS02585
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: moaA
locus tag: SOPEG_RS02585
old locus tag: SOPEG_0504
so part of: sequence
location: 498781..499767
location: region:498781-499767:1
so has part: feature:498781-499767:1:exon
subclass of: SO_0000010

position:498781:1
position: 498781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499767:1
position: 499767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498781-499767:1:exon

SOPEG_RS02585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: moaA
locus tag: SOPEG_RS02585
old locus tag: SOPEG_0504
EC number: 4.1.99.22
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012005754.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTP 3',8-cyclase MoaA
translation: MSQLIDAFERRFYYLRLSITDVCNFRCTYCLPDGYRPQGTRNTGFLTLDEIRRVTRAFAELGTEKVRLTGGEPSLRRDFTEIIAAVRANPAIRTVAVTTNGYRLARGVAAWRDAGLTALNVSVDSLDARQFQAITGQDKFHQVMAGIDAAFEAGFDKVKVNTVLLRDVSDIHLDTFLAWIKPRPLQLRFIELMETGEGNALFRERHVSGELIRQRLEQRGWRCQPRGRTDGPALVFHHEDYRGEIGLIMPYAKDFCASCNRLRVSSMGKLHLCLFGDGGIPLRDLLESDGALEALKTRIAGGLNHKKQTHFLHQGNTGITRNLSYIGG
SIO_010081: SOPEG_RS02585
subclass of: SO_0000673
so part of: SOPEG_RS02585
location: 498781..499767
location: region:498781-499767:1
so has part: feature:498781-499767:1:exon

WP_025244193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:498781-499767:1:exon

SOPEG_RS02590
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: moaC
locus tag: SOPEG_RS02590
old locus tag: SOPEG_ps0505
pseudo: true
so part of: sequence
location: 499787..500256
location: region:499787-500256:1
so has part: feature:499787-500256:1:exon
subclass of: SO_0000010

position:499787:1
position: 499787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500256:1
position: 500256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499787-500256:1:exon

SOPEG_RS02590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: moaC
locus tag: SOPEG_RS02590
old locus tag: SOPEG_ps0505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008456267.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: cyclic pyranopterin monophosphate synthase MoaC
SIO_010081: SOPEG_RS02590
subclass of: SO_0000673
so part of: SOPEG_RS02590
location: 499787..500256
location: region:499787-500256:1
so has part: feature:499787-500256:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:499787-500256:1:exon

SOPEG_RS02595
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02595
old locus tag: SOPEG_ps0506
pseudo: true
so part of: sequence
location: 500253..500425
location: region:500253-500425:1
so has part: feature:500253-500425:1:exon
subclass of: SO_0000010

position:500253:1
position: 500253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500425:1
position: 500425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500253-500425:1:exon

SOPEG_RS02595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02595
old locus tag: SOPEG_ps0506
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002210773.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: MoaD/ThiS family protein
SIO_010081: SOPEG_RS02595
subclass of: SO_0000673
so part of: SOPEG_RS02595
location: 500253..500425
location: region:500253-500425:1
so has part: feature:500253-500425:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:500253-500425:1:exon

SOPEG_RS02600
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02600
old locus tag: SOPEG_ps0507
pseudo: true
so part of: sequence
location: 500426..>500617
location: region:500426-500617:1
so has part: feature:500426-500617:1:exon
subclass of: SO_0000010

position:500426:1
position: 500426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500617:1
position: 500617
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500426-500617:1:exon

SOPEG_RS02600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02600
old locus tag: SOPEG_ps0507
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009091326.1
GO process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: molybdenum cofactor biosynthesis protein MoaE
SIO_010081: SOPEG_RS02600
subclass of: SO_0000673
so part of: SOPEG_RS02600
location: 500426..>500617
location: region:500426-500617:1
so has part: feature:500426-500617:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:500426-500617:1:exon

SOPEG_RS02605
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02605
old locus tag: SOPEG_0508
so part of: sequence
location: 500809..501519
location: region:500809-501519:1
so has part: feature:500809-501519:1:exon
subclass of: SO_0000010

position:500809:1
position: 500809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501519:1
position: 501519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500809-501519:1:exon

SOPEG_RS02605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02605
old locus tag: SOPEG_0508
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006708081.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bax inhibitor-1/YccA family protein
translation: MDRFPRSQGSIVERANSAVQPFMAQVYGWMTCGLLLTAFVAWYASRTPVLLQFIFSSQITFFGLIIAQLALVFVISGMINRVSGAVATSLFMLYSALTGLTLASIFIVYTASSIASTFVVTAGMFGAMTLYGYTTKRDLSSFGNLLFMALIGIVLASLVNIWLKSTALMWAVTYIGVLVFVGLTAYDTQKLKNMGAQLSLENKDQFRKYSIVGALSLYLDFINLFLMLLRIFGNRR
SIO_010081: SOPEG_RS02605
subclass of: SO_0000673
so part of: SOPEG_RS02605
location: 500809..501519
location: region:500809-501519:1
so has part: feature:500809-501519:1:exon

WP_025246991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:500809-501519:1:exon

SOPEG_RS02610
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02610
old locus tag: SOPEG_ps0509
pseudo: true
so part of: sequence
location: 501537..502504
location: region:501537-502504:1
so has part: feature:501537-502504:1:exon
subclass of: SO_0000010

position:501537:1
position: 501537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502504:1
position: 502504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501537-502504:1:exon

SOPEG_RS02610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02610
old locus tag: SOPEG_ps0509
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011410772.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: D-cysteine desulfhydrase
SIO_010081: SOPEG_RS02610
subclass of: SO_0000673
so part of: SOPEG_RS02610
location: 501537..502504
location: region:501537-502504:1
so has part: feature:501537-502504:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:501537-502504:1:exon

SOPEG_RS02615
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: yecC
locus tag: SOPEG_RS02615
old locus tag: SOPEG_ps0510
pseudo: true
so part of: sequence
location: 502501..503252
location: region:502501-503252:1
so has part: feature:502501-503252:1:exon
subclass of: SO_0000010

position:502501:1
position: 502501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503252:1
position: 503252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502501-503252:1:exon

SOPEG_RS02615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: yecC
locus tag: SOPEG_RS02615
old locus tag: SOPEG_ps0510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004387979.1
GO function: GO:0015424 - ABC-type amino acid transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0003333 - amino acid transmembrane transport [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: L-cystine ABC transporter ATP-binding protein YecC
SIO_010081: SOPEG_RS02615
subclass of: SO_0000673
so part of: SOPEG_RS02615
location: 502501..503252
location: region:502501-503252:1
so has part: feature:502501-503252:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:502501-503252:1:exon

SOPEG_RS02620
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: rhlE
locus tag: SOPEG_RS02620
old locus tag: SOPEG_0511
so part of: sequence
location: 503469..504704
location: region:503469-504704:1
so has part: feature:503469-504704:1:exon
subclass of: SO_0000010

position:503469:1
position: 503469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504704:1
position: 504704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503469-504704:1:exon

SOPEG_RS02620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: rhlE
locus tag: SOPEG_RS02620
old locus tag: SOPEG_0511
EC number: 3.6.4.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004941917.1
GO function: GO:0003724 - RNA helicase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent RNA helicase RhlE
translation: MSFDSLGLSAEILRTLAEKGYLEPTPVQQQAIPYVLQGRDIMASAQTGTGKTAAFTLPILQLLEQRPAPAGKQRRPVRALILTPTRELAAQIGENITEYSAHLGLRSLVVFGGVSINPQMMRLRGGVEVLVATPGRLLDLAQQRAVDLSQVEILVLDEADRMLDMGFIHDIRRVMKLLPTKRQSLMFSATFSDEIKTLANSLLDNPASVEVARRNTASEQITQFVHMVDKKRKRELLSDMIGRNNWQQVLVFTRTKHGANHLAEQLNKDGITTAAIHGNKSQGARTRALADFKQGGIRVLVATDIAARGLDIDLLPHVVNYELPQVAEDYVHRIGRTGRAAATGEALSLVCVDELGLLRDIERLLKKSIPRIALPGYDPDPSIKAEPIQQGRGSGRGGNYAGNGGTRSGNR
SIO_010081: SOPEG_RS02620
subclass of: SO_0000673
so part of: SOPEG_RS02620
location: 503469..504704
location: region:503469-504704:1
so has part: feature:503469-504704:1:exon

WP_025244195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:503469-504704:1:exon

SOPEG_RS02625
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02625
old locus tag: SOPEG_ps0512
pseudo: true
so part of: sequence
location: 504930..505582
location: region:504930-505582:1
so has part: feature:504930-505582:1:exon
subclass of: SO_0000010

position:504930:1
position: 504930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505582:1
position: 505582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504930-505582:1:exon

SOPEG_RS02625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02625
old locus tag: SOPEG_ps0512
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017349720.1
GO function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tRNA-dihydrouridine synthase
SIO_010081: SOPEG_RS02625
subclass of: SO_0000673
so part of: SOPEG_RS02625
location: 504930..505582
location: region:504930-505582:1
so has part: feature:504930-505582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:504930-505582:1:exon

SOPEG_RS02630
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02630
old locus tag: SOPEG_ps0513
so part of: sequence
location: 505702..506568
location: region:505702-506568:1
so has part: feature:505702-506568:1:exon
subclass of: SO_0000010

position:505702:1
position: 505702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506568:1
position: 506568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505702-506568:1:exon

SOPEG_RS02630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02630
old locus tag: SOPEG_ps0513
EC number: 2.1.-.-
inference: COORDINATES: protein motif:HMM:NF024880.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MKDNALRKTVILLNFPLQLPGLEISLLFRPATDKAQHNVCYTDYTSAEDSRQKHAHYEHDDIVDIDFIWHPHATLESCVPGHQRFDWAVASHVLEHVPDPLGWILEVLAVLNDGAIFSLVLPNKRYCFDRFRQISSAAQWLQWWLTRQRIPAPQQLYDFLRNCTSDDGEMYERLKDLTPEAYQNTRCPHYTQQQALEFVLNAWTIGHYFDAHCPVFTPESAAASAGGRAFGSPRAETGLLLIPPSAASRSRVSVISRQSKKGPRSFPPSPAAASGAHGGSVFTLVCRP
SIO_010081: SOPEG_RS02630
subclass of: SO_0000673
so part of: SOPEG_RS02630
location: 505702..506568
location: region:505702-506568:1
so has part: feature:505702-506568:1:exon

WP_025244196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:505702-506568:1:exon

SOPEG_RS02635
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02635
old locus tag: SOPEG_0514
so part of: sequence
location: 506774..507601
location: region:506774-507601:1
so has part: feature:506774-507601:1:exon
subclass of: SO_0000010

position:506774:1
position: 506774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507601:1
position: 507601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506774-507601:1:exon

SOPEG_RS02635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02635
old locus tag: SOPEG_0514
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005122843.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MAYFRQNSRLTRAAGALLMLSLAPLAARADQLADIQRTGVVRVATFDANPPFGAIDAKTHRIVGYDVDFACAIADALGVKLALVPTNPANRIPLLQSGKADLIIADITITPERAQVIDFSIPYFVTGQQFLVPAASSDKLEDYASARIGAVKGTTGEQALHHRFPNARVLAYDDIPLALSALRNGNVKAITQDSTILAGLLAGAPDKANYKILPALLSAEQIGIGVKKGEGVLLNAVNQQLIALEHSGEAQRIYNSWFGPQSPAPQPRSFTITSH
SIO_010081: SOPEG_RS02635
subclass of: SO_0000673
so part of: SOPEG_RS02635
location: 506774..507601
location: region:506774-507601:1
so has part: feature:506774-507601:1:exon

WP_025244197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:506774-507601:1:exon

SOPEG_RS02640
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02640
old locus tag: SOPEG_0515
so part of: sequence
location: 507616..508434
location: region:507616-508434:1
so has part: feature:507616-508434:1:exon
subclass of: SO_0000010

position:507616:1
position: 507616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508434:1
position: 508434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507616-508434:1:exon

SOPEG_RS02640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02640
old locus tag: SOPEG_0515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008456696.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid ABC transporter ATP-binding protein
translation: MKSLYVPAATLPPGAGDVPVAVEFRRVSKVFGQQPVLRDINFHVNAGEVVAICGPSGSGKSTLIRLINQLETLSSGEILVHQRATAGLRGRRLRALRTGIGFVFQQFNLYSHLTALDNVALALIKIQKLSVAAAHQHAREKLRQVGLADKAQHFPHQLSGGQQQRVAIARALATDADIILFDEPTSALDPEMIGEVLVVMRDLAGNGMTMMVVTHEMQFAREIADRVVFMDGGEILEQAEPALFFTRPQHPRAQRFLERVLSPLGVGEPTPL
SIO_010081: SOPEG_RS02640
subclass of: SO_0000673
so part of: SOPEG_RS02640
location: 507616..508434
location: region:507616-508434:1
so has part: feature:507616-508434:1:exon

WP_269465028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:507616-508434:1:exon

SOPEG_RS02645
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02645
old locus tag: SOPEG_0516
so part of: sequence
location: 508431..509186
location: region:508431-509186:1
so has part: feature:508431-509186:1:exon
subclass of: SO_0000010

position:508431:1
position: 508431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509186:1
position: 509186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508431-509186:1:exon

SOPEG_RS02645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02645
old locus tag: SOPEG_0516
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004129476.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid ABC transporter permease
translation: MIWHPDWAGVLSGQPLAWIGTGFVTTLLVTLVGSLLTTVILLLLALRMMPGRSGRLLVAGWVSLFRNTPLLVQLFFWYFAAWSALPVGWRDYLADDHRWATLPGNLPWLTPEFICAAWGLAVFSAAYLLEELQAGLNALSAGQREAAIAQGFSRLAMLRYILLPQGVRNAWQPLVGQYLNLMKLSSLASAIGFGELTYYISQIESYNAHALEGVAVGTALYLLLGLAMGAILLRLGPRPPAHGAREAGHEL
SIO_010081: SOPEG_RS02645
subclass of: SO_0000673
so part of: SOPEG_RS02645
location: 508431..509186
location: region:508431-509186:1
so has part: feature:508431-509186:1:exon

WP_025244199.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:508431-509186:1:exon

SOPEG_RS02650
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02650
old locus tag: SOPEG_0517
so part of: sequence
location: 509176..509889
location: region:509176-509889:1
so has part: feature:509176-509889:1:exon
subclass of: SO_0000010

position:509176:1
position: 509176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509889:1
position: 509889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509176-509889:1:exon

SOPEG_RS02650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02650
old locus tag: SOPEG_0517
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017492061.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO process: GO:0015837 - amine transport [Evidence IEA]
note: The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc.; The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease subunit
translation: MNFNWAVVQDNMTYLLWGMVAEGEPGGLLLTILIALAAGVIALALGVLLAALAWRFGGWTRRLLFVWADLIRGIPLIFVIFWLYFLLPVAFGHSLPGAVTVTLALAWFTSAAVMHATLAGLRALPTGQVEAGLASGLSHWHVLRLILLPQAWPNLLPSWTGLLTSLIKDTSLAFIVNVPELTTVAGQVNSRLQIYPAEIFLLVGALYYVLCALLTALAAWSGRSAGLRRGGERRLGA
SIO_010081: SOPEG_RS02650
subclass of: SO_0000673
so part of: SOPEG_RS02650
location: 509176..509889
location: region:509176-509889:1
so has part: feature:509176-509889:1:exon

WP_025244200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:509176-509889:1:exon

SOPEG_RS02655
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02655
old locus tag: SOPEG_0518
so part of: sequence
location: complement(510077..510559)
location: region:510077-510559:-1
so has part: feature:510077-510559:-1:exon
subclass of: SO_0000010

position:510077:-1
position: 510077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510559:-1
position: 510559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510077-510559:-1:exon

SOPEG_RS02655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02655
old locus tag: SOPEG_0518
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010845814.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MarR family transcriptional regulator
translation: MNQDHVDRVLEQWRSQRPDLDCLPIGLVGRLARMNNLIGAQVNALHARAGLEPVEFDILATLRRSGEEVTPTRLYQTLMLSSGAMSVRLDKLLTRGLIYRQPHEHDRRSCKVGLTDAGLALIDSAMTAHVENEQRLLAPLDVAQRQQLTALLRLWLQANE
SIO_010081: SOPEG_RS02655
subclass of: SO_0000673
so part of: SOPEG_RS02655
location: complement(510077..510559)
location: region:510077-510559:-1
so has part: feature:510077-510559:-1:exon

WP_025244201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510077-510559:-1:exon

SOPEG_RS02660
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02660
old locus tag: SOPEG_0519
so part of: sequence
location: 510658..511569
location: region:510658-511569:1
so has part: feature:510658-511569:1:exon
subclass of: SO_0000010

position:510658:1
position: 510658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511569:1
position: 511569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510658-511569:1:exon

SOPEG_RS02660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02660
old locus tag: SOPEG_0519
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004089681.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EamA family transporter
translation: MPILLALLAPILWGSTYATVRLFLQEQSPVWVAVWRALPAGILLLMIHPTKPPLPAKKMLALSFCNIAAFFLLLLIAAYRLPGSIAGTLNATMPLQVMLLRWLQEGKRPSWWMALLSLAEIAGVALLLNPSSSPDPVGVAAALAATLLIAQSTLWMSRWQYRDALALTAWQLLLGGMMLLPVALALAGPSALPRPHAWPGLIWLVLANSALAYWCWVWALNRFGPAVMSIVSLLNPLSAVLLGVMLLPERLSWPQWLGIALILFAVLLMKIPTALRRPVRAKAARGVPPAAVADRPEGSPEQR
SIO_010081: SOPEG_RS02660
subclass of: SO_0000673
so part of: SOPEG_RS02660
location: 510658..511569
location: region:510658-511569:1
so has part: feature:510658-511569:1:exon

WP_025244202.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510658-511569:1:exon

SOPEG_RS28595
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS28595
so part of: sequence
location: 511631..512050
location: region:511631-512050:1
so has part: feature:511631-512050:1:exon
subclass of: SO_0000010

position:511631:1
position: 511631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512050:1
position: 512050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511631-512050:1:exon

SOPEG_RS28595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS28595
inference: COORDINATES: protein motif:HMM:NF013199.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PQQ-binding-like beta-propeller repeat protein
translation: MTSERLYVQHAPLPAAAAATETDRTGRNEWRHYDRTPAWAIHTDDVMQPGEDKKGREFNFEATPIKVANRLYLCTPHRRVLVLNATTGKTLWTYDPHNDTRANEYLACRGVPITNRPPRQCPLRSAHYQHHRRCQTHRA
SIO_010081: SOPEG_RS28595
subclass of: SO_0000673
so part of: SOPEG_RS28595
location: 511631..512050
location: region:511631-512050:1
so has part: feature:511631-512050:1:exon

WP_051419398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:511631-512050:1:exon

SOPEG_RS28600
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS28600
so part of: sequence
location: 512097..512438
location: region:512097-512438:1
so has part: feature:512097-512438:1:exon
subclass of: SO_0000010

position:512097:1
position: 512097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512438:1
position: 512438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512097-512438:1:exon

SOPEG_RS28600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS28600
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNLTDLMGKVPPGFHFITSQPLVVNDRVVLGGRIYDNQARGEPSGVVRAFDPQSGKLAWAWDMGRSDPTAPLKPGETYTRGTPNGWRGPGAGAGLYPPGERHAGLLRRTASAV
SIO_010081: SOPEG_RS28600
subclass of: SO_0000673
so part of: SOPEG_RS28600
location: 512097..512438
location: region:512097-512438:1
so has part: feature:512097-512438:1:exon

WP_051419399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:512097-512438:1:exon

SOPEG_RS28605
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS28605
so part of: sequence
location: 512347..513567
location: region:512347-513567:1
so has part: feature:512347-513567:1:exon
subclass of: SO_0000010

position:512347:1
position: 512347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513567:1
position: 513567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512347-513567:1:exon

SOPEG_RS28605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS28605
inference: COORDINATES: protein motif:HMM:NF013199.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PQQ-binding-like beta-propeller repeat protein
translation: MAGADPALGLVYIPLGNATPDYYGAQRRPFDDKYSSAIVALDLATGRERWHFQTVHHDVWDFDLPIGPLLVDLPQPGGGTVPALVQTTKMGQLFLLDRRTGKPLAQVEERPVPQADPFPGERLSPTQPYSTSMPTFAPANLTEKDLWGATPFDQLWCRVQFRRFGYQGQYTPPGLGTRIAYPAFDGVMDWFGASIDPARHVLIANTSYIPFIAEGVTEQKALRRGLMQPWAGWESNQPYPKPKEFAVGPQYGTPYAEIVRSWLSPLGEPCNAPPWGKLAAIDLQSRKISWERPVGTTRDMNILNTHTNAVLPTGIFTMGGNIITAGGLIFMGATADDYLRAFDEASGKELWRGRLPAGGQATPITYLGADGCQYVVIAAGGHGGLGTRTGDSVVAWALPTRRAAGK
SIO_010081: SOPEG_RS28605
subclass of: SO_0000673
so part of: SOPEG_RS28605
location: 512347..513567
location: region:512347-513567:1
so has part: feature:512347-513567:1:exon

WP_071882117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:512347-513567:1:exon

SOPEG_RS02670
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02670
old locus tag: SOPEG_ps0521
so part of: sequence
location: complement(513754..513963)
location: region:513754-513963:-1
so has part: feature:513754-513963:-1:exon
subclass of: SO_0000010

position:513754:-1
position: 513754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513963:-1
position: 513963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513754-513963:-1:exon

SOPEG_RS02670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02670
old locus tag: SOPEG_ps0521
inference: COORDINATES: protein motif:HMM:NF027270.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YjcB family protein
translation: MTGTSNRSSRNATAFIFTGVGIGMACWFVTGLLGITLAQLLMIRHEMWESMKQGMLFMMANTPPDLQFT
SIO_010081: SOPEG_RS02670
subclass of: SO_0000673
so part of: SOPEG_RS02670
location: complement(513754..513963)
location: region:513754-513963:-1
so has part: feature:513754-513963:-1:exon

WP_025244203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513754-513963:-1:exon

SOPEG_RS23895
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: istA
locus tag: SOPEG_RS23895
old locus tag: SOPEG_ps0522
pseudo: true
so part of: sequence
location: 514116..515673
location: region:514116-515673:1
so has part: feature:514116-515673:1:exon
subclass of: SO_0000010

position:514116:1
position: 514116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515673:1
position: 515673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514116-515673:1:exon

SOPEG_RS23895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: istA
locus tag: SOPEG_RS23895
old locus tag: SOPEG_ps0522
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025245097.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21 family transposase
SIO_010081: SOPEG_RS23895
subclass of: SO_0000673
so part of: SOPEG_RS23895
location: 514116..515673
location: region:514116-515673:1
so has part: feature:514116-515673:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:514116-515673:1:exon

SOPEG_RS02680
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: istB
locus tag: SOPEG_RS02680
old locus tag: SOPEG_0523
so part of: sequence
location: 515685..516434
location: region:515685-516434:1
so has part: feature:515685-516434:1:exon
subclass of: SO_0000010

position:515685:1
position: 515685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516434:1
position: 516434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515685-516434:1:exon

SOPEG_RS02680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: istB
locus tag: SOPEG_RS02680
old locus tag: SOPEG_0523
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025245096.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element ISSoEn3 family helper ATPase IstB
translation: MDTLLMALRELKLSAMVQALETQRELPGSYGELGFEERLSLMVEAENLHRKNNHIFRMRRQSQMHLQAKPEDIRYIPSRGVTPEQMRDLLGGQYLKYQKSILITGPTGTGKTWLSCALGEQACRQQYSMRYWRVGRLLAHLHQCQVDGTYLKQLKQLEKIELLILDDVGLESISPMQATMLLEVMEDRYDKSSSILISQLPVKKWYGLIENPTTADALLDRLVHPSYRLELKGESLRKEQGVASTGKID
SIO_010081: SOPEG_RS02680
subclass of: SO_0000673
so part of: SOPEG_RS02680
location: 515685..516434
location: region:515685-516434:1
so has part: feature:515685-516434:1:exon

WP_025244204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:515685-516434:1:exon

SOPEG_RS27015
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS27015
so part of: sequence
location: complement(516472..516720)
location: region:516472-516720:-1
so has part: feature:516472-516720:-1:exon
subclass of: SO_0000010

position:516472:-1
position: 516472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516720:-1
position: 516720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516472-516720:-1:exon

SOPEG_RS27015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS27015
inference: COORDINATES: protein motif:HMM:NF027270.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MWRNAKKRGKITPSVDDWRNFYRGNACRKLSCDALGTAQRDDDVFCQPAARAVPPVQIPTYPISCSGDIRSVIPIFSDHPFQ
SIO_010081: SOPEG_RS27015
subclass of: SO_0000673
so part of: SOPEG_RS27015
location: complement(516472..516720)
location: region:516472-516720:-1
so has part: feature:516472-516720:-1:exon

WP_236851596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:516472-516720:-1:exon

SOPEG_RS02685
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02685
old locus tag: SOPEG_0524
so part of: sequence
location: complement(516775..518079)
location: region:516775-518079:-1
so has part: feature:516775-518079:-1:exon
subclass of: SO_0000010

position:516775:-1
position: 516775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518079:-1
position: 518079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516775-518079:-1:exon

SOPEG_RS02685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02685
old locus tag: SOPEG_0524
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015697609.1
GO function: GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TolC family protein
translation: MGPDYQPPQPSTPSAFNDLRRTDRTASRALAAQPDPKWWRTFNDAQLDSLIDRAIAGNLSLQQAVLRIAGAREQTLQAGAAGLPTVSANASATRQQLGLKGELDSYGVRAQVAESSEELASRLDSLTRPIHLYQGSFDTSWELDLWGRVRRSVEMANAQTQASVESRNDALVSLEAEVARAYLQFLQLRGAQSVSDTLMAQIDVAQYQAQQRQAMNGLAVPVGVPASLARRRPDVREAEAQLHAATANIGVSGAQLFPDLSLTGQFEMRNTDSDYLTHWSSHFYSYGPQVSIPIFQGGRLVSNVRLARAQQANAVLAYRQTVLTALQDVENALVSYRADQQRVDGLEQTADALQNAFNLASNSYRQGISTFIEVLDAQRQLAQARQQAASARVQSSVDLVSLYKALGGGLELYPQGDLPKFQIVGPAETVNGKS
SIO_010081: SOPEG_RS02685
subclass of: SO_0000673
so part of: SOPEG_RS02685
location: complement(516775..518079)
location: region:516775-518079:-1
so has part: feature:516775-518079:-1:exon

WP_236851597.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:516775-518079:-1:exon

SOPEG_RS02690
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02690
old locus tag: SOPEG_0525
so part of: sequence
location: complement(518171..519739)
location: region:518171-519739:-1
so has part: feature:518171-519739:-1:exon
subclass of: SO_0000010

position:518171:-1
position: 518171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519739:-1
position: 519739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518171-519739:-1:exon

SOPEG_RS02690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02690
old locus tag: SOPEG_0525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012441915.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO process: GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DHA2 family efflux MFS transporter permease subunit
translation: MSGDRHWTPSSNPWAVAIVVTLAVFMEILDTTIVNVALPHVAGTLSSSYDESTWVLTSYLVANGIVLPISAFLSRVRGRKQYFLICVAMFTVCSFLCGITTELWQMILFRVMQVFFGGGLQPVQQSVLLDYFKPEDRGKAFGLSSIAIIVAPVVGPTLGGWITDNYSWRWVFLINIPVGVLTFLAIYQMLEDPPWERKVKNGKLNIDYIGIGLIALGLGCLQVMLDRGEDDDWFASGLIQLFALLAVVGLVGAVYWLLYTRKPVVDLRCLKDRNFAVSSLLMAGMAMILYGSSVVMPQLAQQELGYTVTWSGLVLSPGAELIVMSITLVLKLMPVVQTLWLIAFGFTLMTLSFIYSSHFVPNIDFSTMVKMRAAQSIGLGFLFVPLTTLAFITLAPRLNADGSALFTMFRNVAGSIGISLSTAAITERSQAHSAYMVHNMSPFNEQFQQAIQRAAQAFRDAGSLIGDPTSLATGQLYQQMVAQSRILAYVDVFSLCALVSLILIPFCLLLSPVKSEGNAGAH
SIO_010081: SOPEG_RS02690
subclass of: SO_0000673
so part of: SOPEG_RS02690
location: complement(518171..519739)
location: region:518171-519739:-1
so has part: feature:518171-519739:-1:exon

WP_025244206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:518171-519739:-1:exon

SOPEG_RS02695
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02695
old locus tag: SOPEG_ps0526
pseudo: true
so part of: sequence
location: complement(519736..>520631)
location: region:519736-520631:-1
so has part: feature:519736-520631:-1:exon
subclass of: SO_0000010

position:519736:-1
position: 519736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520631:-1
position: 520631
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519736-520631:-1:exon

SOPEG_RS02695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02695
old locus tag: SOPEG_ps0526
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009091215.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: HlyD family secretion protein
SIO_010081: SOPEG_RS02695
subclass of: SO_0000673
so part of: SOPEG_RS02695
location: complement(519736..>520631)
location: region:519736-520631:-1
so has part: feature:519736-520631:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:519736-520631:-1:exon

SOPEG_RS02700
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02700
old locus tag: SOPEG_ps0527
pseudo: true
so part of: sequence
location: complement(<521221..521508)
location: region:521221-521508:-1
so has part: feature:521221-521508:-1:exon
subclass of: SO_0000010

position:521221:-1
position: 521221
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:521508:-1
position: 521508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521221-521508:-1:exon

SOPEG_RS02700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02700
old locus tag: SOPEG_ps0527
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019845625.1
GO function: GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006749 - glutathione metabolic process [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glutathione S-transferase N-terminal domain-containing protein
SIO_010081: SOPEG_RS02700
subclass of: SO_0000673
so part of: SOPEG_RS02700
location: complement(<521221..521508)
location: region:521221-521508:-1
so has part: feature:521221-521508:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:521221-521508:-1:exon

SOPEG_RS02705
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02705
old locus tag: SOPEG_0528
so part of: sequence
location: complement(521530..521871)
location: region:521530-521871:-1
so has part: feature:521530-521871:-1:exon
subclass of: SO_0000010

position:521530:-1
position: 521530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521871:-1
position: 521871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521530-521871:-1:exon

SOPEG_RS02705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02705
old locus tag: SOPEG_0528
inference: COORDINATES: protein motif:HMM:NF025054.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MENSLICVAESDSQLLGVAQLQVEEDEAFLARLFVSPARQKAGIGKSLFGWSIKAAHRAGATRLLIDADPLAAGFYQRMGARQEGSVDSVTVPGWRKPRFRVTLSTCASAHGF
SIO_010081: SOPEG_RS02705
subclass of: SO_0000673
so part of: SOPEG_RS02705
location: complement(521530..521871)
location: region:521530-521871:-1
so has part: feature:521530-521871:-1:exon

WP_158382324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:521530-521871:-1:exon

SOPEG_RS02710
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02710
old locus tag: SOPEG_ps0529
so part of: sequence
location: complement(522009..522332)
location: region:522009-522332:-1
so has part: feature:522009-522332:-1:exon
subclass of: SO_0000010

position:522009:-1
position: 522009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522332:-1
position: 522332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522009-522332:-1:exon

SOPEG_RS02710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02710
old locus tag: SOPEG_ps0529
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MALTSVRPGYPPRLEVCCEKGTFTLFNDCIDVWQIEGVDNPAQPRPPVADNGASNATLNDSRRHQAILADFERAVAGGGEPPLADDDDARRATELILQIYHQHERKE
SIO_010081: SOPEG_RS02710
subclass of: SO_0000673
so part of: SOPEG_RS02710
location: complement(522009..522332)
location: region:522009-522332:-1
so has part: feature:522009-522332:-1:exon

WP_051419404.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:522009-522332:-1:exon

SOPEG_RS25885
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS25885
old locus tag: SOPEG_ps0530
pseudo: true
so part of: sequence
location: <522310..523885
location: region:522310-523885:1
so has part: feature:522310-523885:1:exon
subclass of: SO_0000010

position:522310:1
position: 522310
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:523885:1
position: 523885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522310-523885:1:exon

SOPEG_RS25885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS25885
old locus tag: SOPEG_ps0530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017459806.1
GO function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glycoside hydrolase family 3 N-terminal domain-containing protein
SIO_010081: SOPEG_RS25885
subclass of: SO_0000673
so part of: SOPEG_RS25885
location: <522310..523885
location: region:522310-523885:1
so has part: feature:522310-523885:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:522310-523885:1:exon

SOPEG_RS29090
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS29090
so part of: sequence
location: complement(523872..524012)
location: region:523872-524012:-1
so has part: feature:523872-524012:-1:exon
subclass of: SO_0000010

position:523872:-1
position: 523872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524012:-1
position: 524012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523872-524012:-1:exon

SOPEG_RS29090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS29090
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYPPEARIIGGLREIHGAQTDAAQAQHLLFDAAPNRFQQPVRFIAA
SIO_010081: SOPEG_RS29090
subclass of: SO_0000673
so part of: SOPEG_RS29090
location: complement(523872..524012)
location: region:523872-524012:-1
so has part: feature:523872-524012:-1:exon

WP_236851872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:523872-524012:-1:exon

SOPEG_RS02720
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02720
old locus tag: SOPEG_ps0531
so part of: sequence
location: 524054..524737
location: region:524054-524737:1
so has part: feature:524054-524737:1:exon
subclass of: SO_0000010

position:524054:1
position: 524054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524737:1
position: 524737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524054-524737:1:exon

SOPEG_RS02720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02720
old locus tag: SOPEG_ps0531
inference: COORDINATES: protein motif:HMM:NF021509.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oxygenase MpaB family protein
translation: MAANVASLGAGGVWDHSHFRSDMLGRLRRTAQFISVTSFGPTAAAEWLIARVRQIHLQVNGVDPSGTAYRVSDPALLTWVHVAEARSFLAAHLRFRNPRLSGADQDAYYRQAMKVAWALGARDVSASRAEVEAYLQAMRPRLVCDDRTRGVTRLLLYAPMPSRLAQPAGWLLMRAGIDLLPDWAIDQLHLDGPALRRVLVTPAVHSLARVLRWSVRSGAWRASPPDG
SIO_010081: SOPEG_RS02720
subclass of: SO_0000673
so part of: SOPEG_RS02720
location: 524054..524737
location: region:524054-524737:1
so has part: feature:524054-524737:1:exon

WP_236851761.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:524054-524737:1:exon

SOPEG_RS02725
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: idi
locus tag: SOPEG_RS02725
old locus tag: SOPEG_ps0532
pseudo: true
so part of: sequence
location: 525015..525562
location: region:525015-525562:1
so has part: feature:525015-525562:1:exon
subclass of: SO_0000010

position:525015:1
position: 525015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525562:1
position: 525562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525015-525562:1:exon

SOPEG_RS02725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: idi
locus tag: SOPEG_RS02725
old locus tag: SOPEG_ps0532
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015839816.1
GO function: GO:0004452 - isopentenyl-diphosphate delta-isomerase activity [Evidence IEA]
GO process: GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: isopentenyl-diphosphate Delta-isomerase
SIO_010081: SOPEG_RS02725
subclass of: SO_0000673
so part of: SOPEG_RS02725
location: 525015..525562
location: region:525015-525562:1
so has part: feature:525015-525562:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:525015-525562:1:exon

SOPEG_RS02730
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02730
old locus tag: SOPEG_ps0533
pseudo: true
so part of: sequence
location: <525646..526430
location: region:525646-526430:1
so has part: feature:525646-526430:1:exon
subclass of: SO_0000010

position:525646:1
position: 525646
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:526430:1
position: 526430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525646-526430:1:exon

SOPEG_RS02730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02730
old locus tag: SOPEG_ps0533
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006324300.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ABC transporter permease
SIO_010081: SOPEG_RS02730
subclass of: SO_0000673
so part of: SOPEG_RS02730
location: <525646..526430
location: region:525646-526430:1
so has part: feature:525646-526430:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:525646-526430:1:exon

SOPEG_RS02735
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02735
pseudo: true
so part of: sequence
location: 526427..527315
location: region:526427-527315:1
so has part: feature:526427-527315:1:exon
subclass of: SO_0000010

position:526427:1
position: 526427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527315:1
position: 527315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526427-527315:1:exon

SOPEG_RS02735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007887828.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
SIO_010081: SOPEG_RS02735
subclass of: SO_0000673
so part of: SOPEG_RS02735
location: 526427..527315
location: region:526427-527315:1
so has part: feature:526427-527315:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:526427-527315:1:exon

SOPEG_RS02740
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02740
so part of: sequence
location: 527312..528034
location: region:527312-528034:1
so has part: feature:527312-528034:1:exon
subclass of: SO_0000010

position:527312:1
position: 527312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528034:1
position: 528034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527312-528034:1:exon

SOPEG_RS02740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004939366.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MMTRRILTDPLLWCLLLLLALLFGMPHMTRLFVALFPALDRPVYRQDSFASLAFAHLWLVLVSSMIAVVIGVGAGIWVTRPAGRAFRPLLETVAAVGQTFPPVPVMGFSAEPAVIALVLYGLRPIVQATIAGIETVPASLHDIATGAGMSRGQILRRLELPLAAPVIISGIRTSVIINIGTAAIASTVGVKSLGSPIIIGLSGFNIAYVLQGALLVALLAIISDMLFERWLRALDVSYGR
SIO_010081: SOPEG_RS02740
subclass of: SO_0000673
so part of: SOPEG_RS02740
location: 527312..528034
location: region:527312-528034:1
so has part: feature:527312-528034:1:exon

WP_025244212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:527312-528034:1:exon

SOPEG_RS02750
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02750
old locus tag: SOPEG_ps0536
so part of: sequence
location: 528290..528517
location: region:528290-528517:1
so has part: feature:528290-528517:1:exon
subclass of: SO_0000010

position:528290:1
position: 528290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528517:1
position: 528517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528290-528517:1:exon

SOPEG_RS02750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02750
old locus tag: SOPEG_ps0536
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTPTPLAIRLASPHSAAARSLMDELSAALSALTGDDGRTSFDPAQTFGAGGCFAIAYAVPDGTALGCGALQPLAP
SIO_010081: SOPEG_RS02750
subclass of: SO_0000673
so part of: SOPEG_RS02750
location: 528290..528517
location: region:528290-528517:1
so has part: feature:528290-528517:1:exon

WP_025244214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:528290-528517:1:exon

SOPEG_RS02755
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: dinG
locus tag: SOPEG_RS02755
old locus tag: SOPEG_0537
so part of: sequence
location: 528645..530777
location: region:528645-530777:1
so has part: feature:528645-530777:1:exon
subclass of: SO_0000010

position:528645:1
position: 528645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530777:1
position: 530777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528645-530777:1:exon

SOPEG_RS02755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: dinG
locus tag: SOPEG_RS02755
old locus tag: SOPEG_0537
EC number: 3.6.4.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004709075.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
GO process: GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent DNA helicase DinG
translation: MALSLATKAQIHDWYKALQQHVPDFIPREPQRQMIAEVARALAGDIERHLVIEAPTGVGKTLSYLIPGIAIGRAEQKPLVVSTANVALQDQIFSKDLPLLRKLIPDLTFIGAFGRRRYVCPRNLAADGVSQGDLLLFLDDPLAPASGAEHQQCVALQTSLNNASWDGLRDHYPQAVSDPLWARLSTDKANCLGRNCHYFRDCPFYLARKEIENADVVVANHALVMAALESESVLPEAKNMLLVLDEGHHLPDVARDALEMDGEISSRFFAHQLEQFRRQTALILSQFRPARPPQLSQETRLQAHCDELLALIGLFEQQAEAYLPHDSVQGEHRFALGVLPAPMSEAAAQLCKLSDRLRMLAEFLLADLGEKTGKHDIVRLRQALLQTSRIQGFWEATSRLWRLAALEKASNAPISKWLTRKQGDNGAQLFLHCVGIRVSDQLEKLLWSRIPHVVITSATLRSLESFARLQELSGLHERNGDRFITLASPFDHRHQGRLVIPRMPMDPVMAQEADHIAWMARYFRAEWEKASHRGMLVLFASHRALRLFLDQVTDLRPHLLVQGDKPRYRLVEEHRRRVDRGRTSALLGLQSFAEGLDLKGEWLTQVHIHKVAFPPVDSPVILTEGEWLKTQQRHPFEVQSLPSASFNLIQQVGRLIRSHDCHGEVIIYDRRLLTKSYGARLLAALPVFPIVQPALAPAAGASAQPATSSD
SIO_010081: SOPEG_RS02755
subclass of: SO_0000673
so part of: SOPEG_RS02755
location: 528645..530777
location: region:528645-530777:1
so has part: feature:528645-530777:1:exon

WP_038468113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:528645-530777:1:exon

SOPEG_RS02760
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02760
old locus tag: SOPEG_0538
so part of: sequence
location: 530874..531497
location: region:530874-531497:1
so has part: feature:530874-531497:1:exon
subclass of: SO_0000010

position:530874:1
position: 530874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531497:1
position: 531497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530874-531497:1:exon

SOPEG_RS02760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02760
old locus tag: SOPEG_0538
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013508415.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FMN-binding negative transcriptional regulator
translation: MYIPPALRQTDVEAQRALIAAHPLAQLISLGEQGLQADPLPLLLDSYPDGAWRLRGHLARANPHGKSLARDGTCLVIFQGEAGYISPGWYVAKAEHGKVVPTWNYQTVHCHGQAQVINDPAWLMALLRVLTDNQEARRQAPWRVEDVPPPGFIDTLIGAIVGIEIRVTRTEAKWKLSQNRSCADRDGAIAGLMADGNGPLAREMGRG
SIO_010081: SOPEG_RS02760
subclass of: SO_0000673
so part of: SOPEG_RS02760
location: 530874..531497
location: region:530874-531497:1
so has part: feature:530874-531497:1:exon

WP_038468116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:530874-531497:1:exon

SOPEG_RS02765
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: ybiB
locus tag: SOPEG_RS02765
old locus tag: SOPEG_ps0539
pseudo: true
so part of: sequence
location: 531530..532500
location: region:531530-532500:1
so has part: feature:531530-532500:1:exon
subclass of: SO_0000010

position:531530:1
position: 531530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532500:1
position: 532500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531530-532500:1:exon

SOPEG_RS02765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: ybiB
locus tag: SOPEG_RS02765
old locus tag: SOPEG_ps0539
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009638214.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA-binding protein YbiB
SIO_010081: SOPEG_RS02765
subclass of: SO_0000673
so part of: SOPEG_RS02765
location: 531530..532500
location: region:531530-532500:1
so has part: feature:531530-532500:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:531530-532500:1:exon

SOPEG_RS02770
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02770
old locus tag: SOPEG_0540
so part of: sequence
location: 532535..534394
location: region:532535-534394:1
so has part: feature:532535-534394:1:exon
subclass of: SO_0000010

position:532535:1
position: 532535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534394:1
position: 534394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532535-534394:1:exon

SOPEG_RS02770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02770
old locus tag: SOPEG_0540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006324329.1
GO function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M3 family metallopeptidase
translation: MPHAIDYFNRLNQDYLAVHQAKEDLFWQHYMGTGGAEVSGRFAAAETAYKRFIAEPTRPAELRHLISQLATAPSSPERDQMLHGLRGWARFFDCNVIEDPLAQGLMDEIIAAENDLYARRKTLTLKHLLAEQDPPVAATLGELLTNQANNDSERCRQSSQQALRDLEQWLLHNGFPELVSLRNRFARQMGYRNFFDYKVNKTEQMTPEQLFAILDSFELQTRDGMQASLRRLASEKGDAALAPWNIRYASAGDVTRQLDPYLPFADSLRSWVDSFKRLHIGFNGARMQLDLLVRQGKYENGFMHGSVPSFLSQGTWVPARINFTSLARPDQLGSGISGIATLFHEGGHAAHFANIRQNAPCFSQEFPPTSMAYAETQSMFCDSLLDDADWLKRYAVNDRGEAVSDALIHDAIAARQPMRAFNERHILLVPYFEWALYQWDDAQLTPEAITRLARDNERRILGIDGSPRPTMAIPHLLSQESACSYQGYLLALMAVEQTRRFFMQRDGYLTDNPAIGPSLARHYWQPGNSVSHDATLVSLTGEGFNPAYLANVCNQTVEQAWRQAQDCMAQAQTRPQPPVDFAWQAEIQVVDGDEVLASNAEGDDTVCRQFAQAIQRRYG
SIO_010081: SOPEG_RS02770
subclass of: SO_0000673
so part of: SOPEG_RS02770
location: 532535..534394
location: region:532535-534394:1
so has part: feature:532535-534394:1:exon

WP_025244215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:532535-534394:1:exon

SOPEG_RS02780
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
locus tag: SOPEG_RS02780
pseudo: true
so part of: sequence
location: complement(534797..>535078)
location: region:534797-535078:-1
so has part: feature:534797-535078:-1:exon
subclass of: SO_0000010

position:534797:-1
position: 534797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535078:-1
position: 535078
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534797-535078:-1:exon

SOPEG_RS02780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
locus tag: SOPEG_RS02780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012005902.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: flavin reductase family protein
SIO_010081: SOPEG_RS02780
subclass of: SO_0000673
so part of: SOPEG_RS02780
location: complement(534797..>535078)
location: region:534797-535078:-1
so has part: feature:534797-535078:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:534797-535078:-1:exon

SOPEG_RS02785
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: istA
locus tag: SOPEG_RS02785
old locus tag: SOPEG_ps0542
pseudo: true
so part of: sequence
location: 535209..536760
location: region:535209-536760:1
so has part: feature:535209-536760:1:exon
subclass of: SO_0000010

position:535209:1
position: 535209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536760:1
position: 536760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535209-536760:1:exon

SOPEG_RS02785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2342
gene: istA
locus tag: SOPEG_RS02785
old locus tag: SOPEG_ps0542
inference: COORDINATES: similar to AA sequence:RefSeq:WP_025245097.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21-like element ISSoEn3 family transposase
SIO_010081: SOPEG_RS02785
subclass of: SO_0000673
so part of: SOPEG_RS02785
location: 535209..536760
location: region:535209-536760:1
so has part: feature:535209-536760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:535209-536760:1:exon

SOPEG_RS02790
type: Gene
subclass of: SO_0000704
RO_0002162: 2342
gene: istB
locus tag: SOPEG_RS02790
old locus tag: SOPEG_ps0543
pseudo: true
so part of: sequence
location: 536772..>537341
location: region:536772-537341:1
so has part: feature:536772-537341:1:exon
subclass of: SO_0000010

position:536772:1
position: 536772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition