Hymenobacter oligotrophus strain sh-6 plasmid unnamed3, complete sequence.
type: Entry
definition: Hymenobacter oligotrophus strain sh-6 plasmid unnamed3, complete sequence.
sequence version: NZ_CP032320.1
sequence date: 2022-10-06
sequence: sequence
division: CON
label: NZ_CP032320.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN10031373
keyword: RefSeq
source: Hymenobacter oligotrophus
organism: Hymenobacter oligotrophus
taxonomy: Bacteria; Bacteroidota; Cytophagia; Cytophagales; Hymenobacteraceae; Hymenobacter.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP032320.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 3.0 AUGAUST-2018\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 187.42x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 10/06/2022 01:01:25\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 3,657\nCDSs (total) :: 3,596\nGenes (coding) :: 3,575\nCDSs (with protein) :: 3,575\nGenes (RNA) :: 61\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 46\nncRNAs :: 3\nPseudo Genes (total) :: 21\nCDSs (without protein) :: 21\nPseudo Genes (ambiguous residues) :: 0 of 21\nPseudo Genes (frameshifted) :: 5 of 21\nPseudo Genes (incomplete) :: 16 of 21\nPseudo Genes (internal stop) :: 1 of 21\nPseudo Genes (multiple problems) :: 1 of 21\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 11152
topology: circular
so has quality: SO_0000988
location: 1..11152
location: region:1-11152:1
RO_0002162: 2319843

NZ_CP032320
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN10031373
type: BioSample
SIO_000068: biosample

1
title: Hymenobacter medium sp. nov., isolated from R2A medium
author: Yingchao, G.
journal: Unpublished

2
title: Direct Submission
author: Yingchao, G.
journal: Submitted (11-SEP-2018) Wuhan Uiversity, College of Life Science, Guangba Road, Wuhan 430000, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11152:1
position: 11152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-11152:1:source
so part of: sequence
organism: Hymenobacter oligotrophus
mol type: genomic DNA
strain: sh-6
isolation source: R2A medium
type material: type material of Hymenobacter oligotrophus
plasmid: unnamed3
country: China
collection date: 2016

2319843
type: Taxonomy
SIO_000068: taxonomy

D3Y59_RS18030
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS18030
old locus tag: D3Y59_18030
so part of: sequence
location: join(10425..11152,1..304)
location: region:1-11152:1
so has part: feature:10425-11152:1:exon
so has part: feature:1-304:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:10425-11152:1:exon

position:10425:1
position: 10425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-304:1:exon

position:304:1
position: 304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

D3Y59_RS18030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS18030
old locus tag: D3Y59_18030
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: ParA family protein
translation: MKNTRVIAFATQKGGAGKSTIGTHVASALCYLYGYKVAMLDCDYPQNTLHAYRNHEQQLLQSDVAFQERLIKQGVTPYPIAISSVEKAVEAIDTLAEKEFDFILVDTPGTVNVVGLSELLERVDYIFLPMEPDMGTIASTMSYMHILGNFTRQQRPESNLEGFYAFWNKFLKAEKRTVYTKTAELFREKGYPLLNSRVESLVSIKDKRSTMFPMPEKELGKLGLGSLITEILELVLGKGTVTPAAHSVGIFRLWRDAGYAIGALLTGVLADTLGLGAALAAIGGLTVLSSLVIRRRMYCLPAPDSIDTATGGCTRPAQTFRLNSTQLVRPLSPHPFWSLLRCA
SIO_010081: D3Y59_RS18030
subclass of: SO_0000673
so part of: D3Y59_RS18030
location: join(10425..11152,1..304)
location: region:1-11152:1
so has part: feature:10425-11152:1:exon
so has part: feature:1-304:1:exon

WP_162910902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10425-11152:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-304:1:exon

D3Y59_RS18035
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS18035
old locus tag: D3Y59_18035
so part of: sequence
location: 551..853
location: region:551-853:1
so has part: feature:551-853:1:exon
subclass of: SO_0000010

position:551:1
position: 551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:853:1
position: 853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:551-853:1:exon

D3Y59_RS18035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS18035
old locus tag: D3Y59_18035
inference: COORDINATES: protein motif:HMM:NF014687.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF202 domain-containing protein
translation: MPVLSPSPPNYDQQGLAAARTRMANERTFLTYMRTSLAMLGFGLALIQLHPVRAGSLGYWAVGAAGVVLLTGWLRFRMRQREIEECRIAVNASETSLPPH
SIO_010081: D3Y59_RS18035
subclass of: SO_0000673
so part of: D3Y59_RS18035
location: 551..853
location: region:551-853:1
so has part: feature:551-853:1:exon

WP_119446610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:551-853:1:exon

D3Y59_RS18040
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS18040
old locus tag: D3Y59_18040
so part of: sequence
location: complement(890..1129)
location: region:890-1129:-1
so has part: feature:890-1129:-1:exon
subclass of: SO_0000010

position:890:-1
position: 890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1129:-1
position: 1129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:890-1129:-1:exon

D3Y59_RS18040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS18040
old locus tag: D3Y59_18040
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MCAAGLEAARLQEVSKQLLTRPALTGINQENIARVLAVVDTLDTLKTSPAVTQLRQAAQLLQVPKPLTQENRPRTSPRW
SIO_010081: D3Y59_RS18040
subclass of: SO_0000673
so part of: D3Y59_RS18040
location: complement(890..1129)
location: region:890-1129:-1
so has part: feature:890-1129:-1:exon

WP_119446611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:890-1129:-1:exon

D3Y59_RS18045
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS18045
old locus tag: D3Y59_18045
so part of: sequence
location: complement(1144..2301)
location: region:1144-2301:-1
so has part: feature:1144-2301:-1:exon
subclass of: SO_0000010

position:1144:-1
position: 1144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2301:-1
position: 2301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1144-2301:-1:exon

D3Y59_RS18045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS18045
old locus tag: D3Y59_18045
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAEPAARGPARHGARGQRVGPRYAVLRAAAPQESALYASTAGTLTQNKIFELKRLLREEQIPAIRAAFDNDTQGHHFDMRLLAGLASDQNPMKVVREHEHQLTVEIVAPQPAGVQALSRQLQAYNEQTRQQFSQANGAPGTPATSPTLRDELIHSQKLGAHTYQFHLPMSAGALHAFNQAASQTLAFEHRVELVKSQGKDWNQDLKQDQLQQVVRRELGEVDEDQYGFGQQHWDNPEISGSGKIAQLHQAQAEARTQGERLLVVELRESRDEAALLPALRENLERIGLHIDHATRHSPGAAREILTELTLRYPVQSPELPAISDALDALGQNPQVTVVESGQDAVERRQLAAVREQERQAGPRCGPVTPPPVTRPVRTSSRRRGK
SIO_010081: D3Y59_RS18045
subclass of: SO_0000673
so part of: D3Y59_RS18045
location: complement(1144..2301)
location: region:1144-2301:-1
so has part: feature:1144-2301:-1:exon

WP_162910901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1144-2301:-1:exon

D3Y59_RS18055
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS18055
old locus tag: D3Y59_18055
so part of: sequence
location: complement(3066..4865)
location: region:3066-4865:-1
so has part: feature:3066-4865:-1:exon
subclass of: SO_0000010

position:3066:-1
position: 3066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4865:-1
position: 4865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3066-4865:-1:exon

D3Y59_RS18055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS18055
old locus tag: D3Y59_18055
inference: COORDINATES: protein motif:HMM:NF024745.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3945 domain-containing protein
translation: MAEQDDEMTPAPVHQIKAGEADESLTTGHAQTSPQPIPQADEAALPPGVAPAGDKAPTTLTPDEQPSKAPEAQATPVGEGQETPTADLATDAVAAAPVGELRITWQQKGDEVAPLLEMRAYLDQLREAGVAVGTLQFERNPAGKLMGGFAVSYDPESNKLGQLEATLQGFRQIGNGVAVVEKPEQAAARRQEAGYDDGYEPPRSKQVREAFGAGQWDALSAQLAAVPRHALTVPEQGQQAAAEQRVQQLAQQQGKTTEQVLRDGKSIFDIDTSGNPASAFLKNFYAHLNGGPKTRQHLEVDYEQTRQDLQARLLRKAGTAQVEVLLDQAPTDPTARAVAVADPSKPAPAEVVAPPAPVAPPFQASEVPQQVLASLGLTLQTLEQSGQLEKLLSGQQTDLLAMQVTSRPDQDPVRFAGKMVLCREADGTATLKMELPQARLVIPNEIGGLPFTPEQRQRLETEGNAGLLRGLKDEQGRAYNGYVAVDKAMNKVVILPEDKVTLHDTIAGVKLTPEQSHDLREGKVVALAGMASGDGGRQFHGTVQVNAAKACIEVRPAAHELVQRQAPQVQQTVPAATKTVVVTPAKEQTTQLKTRGPRH
SIO_010081: D3Y59_RS18055
subclass of: SO_0000673
so part of: D3Y59_RS18055
location: complement(3066..4865)
location: region:3066-4865:-1
so has part: feature:3066-4865:-1:exon

WP_119446614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3066-4865:-1:exon

D3Y59_RS18060
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS18060
old locus tag: D3Y59_18060
so part of: sequence
location: 5190..5492
location: region:5190-5492:1
so has part: feature:5190-5492:1:exon
subclass of: SO_0000010

position:5190:1
position: 5190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5492:1
position: 5492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5190-5492:1:exon

D3Y59_RS18060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS18060
old locus tag: D3Y59_18060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018480087.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloregulator ArsR/SmtB family transcription factor
translation: MDSSLQIMATVLALTGNEVRLRILYLLATEQQLCVCDIADILRMTVSAVSQHLRKLKDGDVLQARKVGQTVFYALSPTHAPVVQPLLAGLIASSTSAPTL
SIO_010081: D3Y59_RS18060
subclass of: SO_0000673
so part of: D3Y59_RS18060
location: 5190..5492
location: region:5190-5492:1
so has part: feature:5190-5492:1:exon

WP_240410613.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5190-5492:1:exon

D3Y59_RS18065
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
gene: merTP
locus tag: D3Y59_RS18065
old locus tag: D3Y59_18065
so part of: sequence
location: 5489..6100
location: region:5489-6100:1
so has part: feature:5489-6100:1:exon
subclass of: SO_0000010

position:5489:1
position: 5489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6100:1
position: 6100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5489-6100:1:exon

D3Y59_RS18065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
gene: merTP
locus tag: D3Y59_RS18065
old locus tag: D3Y59_18065
inference: COORDINATES: protein motif:HMM:NF033556.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mercuric transport protein MerTP
translation: MSKTNQSLLGTGLLAALAASLCCITPLLAVVGGLGASAASFSWLAPFRPFLVALTVGVLAFAWYQALKPAGIEDDCGCAVSSQKPVLQSKAFLGFVTVLATVLLAFPYYGTYLQPQAAVAPTSPASTAESPVWQTASYRIKGMTCEACARHVEQAVQRLPGVQSVTVSYDQATALVRFDATKSPVAQVQQAINGTGYHIVPSR
SIO_010081: D3Y59_RS18065
subclass of: SO_0000673
so part of: D3Y59_RS18065
location: 5489..6100
location: region:5489-6100:1
so has part: feature:5489-6100:1:exon

WP_119446616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5489-6100:1:exon

D3Y59_RS18695
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS18695
old locus tag: D3Y59_18070
so part of: sequence
location: 6116..6334
location: region:6116-6334:1
so has part: feature:6116-6334:1:exon
subclass of: SO_0000010

position:6116:1
position: 6116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6334:1
position: 6334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6116-6334:1:exon

D3Y59_RS18695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS18695
old locus tag: D3Y59_18070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014022306.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GDCCVxC domain-containing (seleno)protein
translation: MKPLQLTSTLTCPVCAHQQSEQMPTDACQYFYECPSCHTILKPLAGHCCVYCSYGTVPCPPMQQPGTSSCCG
SIO_010081: D3Y59_RS18695
subclass of: SO_0000673
so part of: D3Y59_RS18695
location: 6116..6334
location: region:6116-6334:1
so has part: feature:6116-6334:1:exon

WP_119446617.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6116-6334:1:exon

D3Y59_RS18075
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS18075
old locus tag: D3Y59_18075
so part of: sequence
location: complement(6347..8356)
location: region:6347-8356:-1
so has part: feature:6347-8356:-1:exon
subclass of: SO_0000010

position:6347:-1
position: 6347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8356:-1
position: 8356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6347-8356:-1:exon

D3Y59_RS18075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS18075
old locus tag: D3Y59_18075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015267003.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein MobC
translation: MEDEKGLRKIMEFMRLFAIGLLAVNIYYYCFGYFRSLGWTTGVVEHLLESFTRNTFLFKSSWVSKILAVVFLLLSCLGTRGRANQELKGRTVAGSAALGLVLLFGADAVRGLTLGAGSTTVLYAGLLTAGFLLLLSAGAWLSRLFNNDLLKDIFNKENESFPQEERLMENEYSVNLRTEYWLRGKKHRGWLNVVNPFRATMVLGTPGSGKSFAIINEFIRQHLQKGFCMYIYDYKFDDLSRICYNTLLRHQDKFDRPVGFYVINFDNPRKSHRCNPLLPELMTDIVDAYESASTIMLNLNKSWIQKQGDFFVESPINFVAAIIWFLKLFEKGKYCTFPHVIEFLSRDYEEIFPVLASYPEIENLVKPFVSAFQKDAIEQLEGQIASARIPLSRLASPQLYWVMSGNDFTLDINSNEEPKVLCVGNNPERQAIYGAALGLYNARLVKLVNQKGKRKSSLIIDELPTIYFKGLDNLIATARSNKVSTCLGFQDFSQLERDYGQKEAEVIKNTVGNVFSGQVSGNSGKWLSERFGKILQRRQSLSINMRETSTSLSTQMDSMIPASTIANLTQGNFVGAVADNFGEEIEQKVFHARIQVDVKAVAAEASGYQPIPDITSFINPATGKDEAEEMIKANFNRVKTDVKELCARELTRIKQDPALRHLIKEKAEQ
SIO_010081: D3Y59_RS18075
subclass of: SO_0000673
so part of: D3Y59_RS18075
location: complement(6347..8356)
location: region:6347-8356:-1
so has part: feature:6347-8356:-1:exon

WP_119446618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6347-8356:-1:exon

D3Y59_RS18085
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS18085
old locus tag: D3Y59_18085
so part of: sequence
location: complement(8750..9361)
location: region:8750-9361:-1
so has part: feature:8750-9361:-1:exon
subclass of: SO_0000010

position:8750:-1
position: 8750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9361:-1
position: 9361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8750-9361:-1:exon

D3Y59_RS18085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS18085
old locus tag: D3Y59_18085
inference: COORDINATES: protein motif:HMM:NF015397.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
translation: MIAKTITGSDFEGALTYGAGQRQGRGKEPGEAPLLVVSNVIPGSPKEMAQDMQAVAARSKRVQKPVWHTVLSWKAGEAVSQAQKVAAVKRYCELMGAPIDRHQVVVYEHRDKQHAHVHIYLNRVPIDGGPALRTDNNFYRQPAVTRQISQELGMDPLPERRRSLKALDPTKEAARQRVSQALAQVLRQSDREGNSGWRCNCKN
SIO_010081: D3Y59_RS18085
subclass of: SO_0000673
so part of: D3Y59_RS18085
location: complement(8750..9361)
location: region:8750-9361:-1
so has part: feature:8750-9361:-1:exon

WP_119446620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8750-9361:-1:exon

D3Y59_RS18090
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
gene: mobC
locus tag: D3Y59_RS18090
old locus tag: D3Y59_18090
so part of: sequence
location: complement(9363..9680)
location: region:9363-9680:-1
so has part: feature:9363-9680:-1:exon
subclass of: SO_0000010

position:9363:-1
position: 9363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9680:-1
position: 9680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9363-9680:-1:exon

D3Y59_RS18090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
gene: mobC
locus tag: D3Y59_RS18090
old locus tag: D3Y59_18090
inference: COORDINATES: protein motif:HMM:NF017524.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid mobilization relaxosome protein MobC
translation: MELEKPDETTAEAARTLRIDVRVSPDEKKELQEKAAAAGYKKVSAYLRDVGRGAEIKESVPPELRRQLVGIGTNLNQIARLAQAGKSFSNHEAQLLEVLKIIRDI
SIO_010081: D3Y59_RS18090
subclass of: SO_0000673
so part of: D3Y59_RS18090
location: complement(9363..9680)
location: region:9363-9680:-1
so has part: feature:9363-9680:-1:exon

WP_119446621.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9363-9680:-1:exon