Hymenobacter oligotrophus strain sh-6 plasmid unnamed2, complete sequence.
type: Entry
definition: Hymenobacter oligotrophus strain sh-6 plasmid unnamed2, complete sequence.
sequence version: NZ_CP032319.1
sequence date: 2022-10-06
sequence: sequence
division: CON
label: NZ_CP032319.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN10031373
keyword: RefSeq
source: Hymenobacter oligotrophus
organism: Hymenobacter oligotrophus
taxonomy: Bacteria; Bacteroidota; Cytophagia; Cytophagales; Hymenobacteraceae; Hymenobacter.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP032319.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 3.0 AUGAUST-2018\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 187.42x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 10/06/2022 01:01:25\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 3,657\nCDSs (total) :: 3,596\nGenes (coding) :: 3,575\nCDSs (with protein) :: 3,575\nGenes (RNA) :: 61\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 46\nncRNAs :: 3\nPseudo Genes (total) :: 21\nCDSs (without protein) :: 21\nPseudo Genes (ambiguous residues) :: 0 of 21\nPseudo Genes (frameshifted) :: 5 of 21\nPseudo Genes (incomplete) :: 16 of 21\nPseudo Genes (internal stop) :: 1 of 21\nPseudo Genes (multiple problems) :: 1 of 21\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 31586
topology: circular
so has quality: SO_0000988
location: 1..31586
location: region:1-31586:1
RO_0002162: 2319843

NZ_CP032319
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN10031373
type: BioSample
SIO_000068: biosample

1
title: Hymenobacter medium sp. nov., isolated from R2A medium
author: Yingchao, G.
journal: Unpublished

2
title: Direct Submission
author: Yingchao, G.
journal: Submitted (11-SEP-2018) Wuhan Uiversity, College of Life Science, Guangba Road, Wuhan 430000, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31586:1
position: 31586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-31586:1:source
so part of: sequence
organism: Hymenobacter oligotrophus
mol type: genomic DNA
strain: sh-6
isolation source: R2A medium
type material: type material of Hymenobacter oligotrophus
plasmid: unnamed2
country: China
collection date: 2016

2319843
type: Taxonomy
SIO_000068: taxonomy

D3Y59_RS17865
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17865
old locus tag: D3Y59_17865
so part of: sequence
location: 99..788
location: region:99-788:1
so has part: feature:99-788:1:exon
subclass of: SO_0000010

position:99:1
position: 99
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788:1
position: 788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99-788:1:exon

D3Y59_RS17865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17865
old locus tag: D3Y59_17865
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKKTTETKEAAAERRQRELAALTSGVAAFSLMGDAPRPVAPAPAPVEAPAPAVAETPAAPSTPSAAEVAPPAAVKEPEGKKATPASEVAAVPVAPVQAVEPAVAPSPVGEEPRSAAPAPLPLSAPASAPEEEDGEEAEEELPVAPPVAAGGELDLAQLFVPSAEKKTTTLRITADHQQYFTQLGFILGGGASAPDIIHNILSRFREEHEAQLQKAMKKQIRQMMSPKK
SIO_010081: D3Y59_RS17865
subclass of: SO_0000673
so part of: D3Y59_RS17865
location: 99..788
location: region:99-788:1
so has part: feature:99-788:1:exon

WP_119446579.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99-788:1:exon

D3Y59_RS17870
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17870
old locus tag: D3Y59_17870
so part of: sequence
location: 991..2841
location: region:991-2841:1
so has part: feature:991-2841:1:exon
subclass of: SO_0000010

position:991:1
position: 991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2841:1
position: 2841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:991-2841:1:exon

D3Y59_RS17870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17870
old locus tag: D3Y59_17870
inference: COORDINATES: protein motif:HMM:NF019174.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sensor histidine kinase
translation: MKGGAIWAVLGLLLISLGARANNRTPSSTRTPRTPQTIDSLRALVRHAPLPDSTRFQALLALSDKLFAQDVTEGRRVGEQAVTFARRRFDWSGAADALYQLVVNCERAADYVAAMHYSQQGVELTRAHRPRDQWRFTQCLGLVAVDTKDAAGGLRYLRQAYRQQAATPSVGPRERGGLLLNLANTFLVLQRYDSVLHYVTRALPYMQRAADARGLGYVYQFRGEVYAKLTPRSRASLAAAATNMQRALRIMQRYRYQPQAASSALSLARVYRLQGRPRAAQRTAELALALARAEKMPEYEADALSSLAWAYADQKRPARADELDARAEDLRDSLFNGNKARALAQLQVRYDVQLLTEQKKAAEFEQRSQRAQLHSLWLLLGGLATTVGVGGGLYWRLRRQKALLALANQANCRAVAEKEVLLQEIHHRVKNNLQLVSSLLAWQRSTLPDPLLQQALASSQARIQSMALVHEFLYRADNLSQVRMNEYLGELLESLHRSLTTPQQRIQLSSSLAPLVMDPKEASALGLVVNELVTNAYKHAFRDRDRGNLHVALEQTAAGFLLTVQDDGVGLPAAETAPETHSLGLQLVNTLARQLKASVSTAPLLPTGTQVIVASV
SIO_010081: D3Y59_RS17870
subclass of: SO_0000673
so part of: D3Y59_RS17870
location: 991..2841
location: region:991-2841:1
so has part: feature:991-2841:1:exon

WP_119446580.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:991-2841:1:exon

D3Y59_RS17875
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17875
old locus tag: D3Y59_17875
so part of: sequence
location: 2876..3637
location: region:2876-3637:1
so has part: feature:2876-3637:1:exon
subclass of: SO_0000010

position:2876:1
position: 2876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3637:1
position: 3637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2876-3637:1:exon

D3Y59_RS17875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17875
old locus tag: D3Y59_17875
inference: COORDINATES: protein motif:HMM:NF012301.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LytTR family transcriptional regulator DNA-binding domain-containing protein
translation: MATILIVEDELLIAAEIERALVRLGHTPLPPVDNSDEALSVLATQPVELVLMDINIAGDCDGIAAALLVRRQFAVPVVFLTARSDSATLNRAKLAQPYGFLVKPFTDDSLRVQIELALFNAYQAGPVGPVLDTADAGTEVLGSAERCPKFKDYLFVRKGSGHVKVLLSDILYFEALQNYVRLHTVRERFVFDSTLKELEQKLPDQFFKTHRSHIVNLDHVQAYEESSVLLGSEYVPVSRSCKDELKNRIHLVG
SIO_010081: D3Y59_RS17875
subclass of: SO_0000673
so part of: D3Y59_RS17875
location: 2876..3637
location: region:2876-3637:1
so has part: feature:2876-3637:1:exon

WP_119446581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2876-3637:1:exon

D3Y59_RS17880
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17880
old locus tag: D3Y59_17880
pseudo: true
so part of: sequence
location: complement(3626..4677)
location: region:3626-4677:-1
so has part: feature:3626-4677:-1:exon
subclass of: SO_0000010

position:3626:-1
position: 3626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4677:-1
position: 4677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3626-4677:-1:exon

D3Y59_RS17880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17880
old locus tag: D3Y59_17880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007247288.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ArsO family NAD(P)H-dependent flavin-containing monooxygenase
SIO_010081: D3Y59_RS17880
subclass of: SO_0000673
so part of: D3Y59_RS17880
location: complement(3626..4677)
location: region:3626-4677:-1
so has part: feature:3626-4677:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3626-4677:-1:exon

D3Y59_RS17885
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17885
old locus tag: D3Y59_17885
so part of: sequence
location: complement(4692..5126)
location: region:4692-5126:-1
so has part: feature:4692-5126:-1:exon
subclass of: SO_0000010

position:4692:-1
position: 4692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5126:-1
position: 5126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4692-5126:-1:exon

D3Y59_RS17885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17885
old locus tag: D3Y59_17885
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010568731.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arsenate reductase ArsC
translation: MSDKKNVLVLCTGNSCRSQLLHGYLNQLLGDAANVYSAGVETHGLNPQAVQVMREDGVDISHHTSNHVDEYAHVPFDYVLTVCDHANEVCPVFPSTARKLHHNFPDPAKATGTEEEVLQQFRAVRDQVKAYAQEFVQREFVPAE
SIO_010081: D3Y59_RS17885
subclass of: SO_0000673
so part of: D3Y59_RS17885
location: complement(4692..5126)
location: region:4692-5126:-1
so has part: feature:4692-5126:-1:exon

WP_119446582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4692-5126:-1:exon

D3Y59_RS17890
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
gene: arsB
locus tag: D3Y59_RS17890
old locus tag: D3Y59_17890
so part of: sequence
location: complement(5142..6233)
location: region:5142-6233:-1
so has part: feature:5142-6233:-1:exon
subclass of: SO_0000010

position:5142:-1
position: 5142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6233:-1
position: 6233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5142-6233:-1:exon

D3Y59_RS17890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
gene: arsB
locus tag: D3Y59_RS17890
old locus tag: D3Y59_17890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018478211.1
GO function: GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ACR3 family arsenite efflux transporter
translation: MTNLPPTASAVAVARKKLSGLDQGLTLWIFLAMGAGVALGYFVPGVEQAINYFSVGTVNVPLAVGLILMMYPPLAKVRYEQLPKVFRNTRIIGLSLLLNWVVGPLLMFLLAIWLLPDKPEYMMGLILIGIARCIAMVLVWNDLADGSREYAAGLVALNSIFQVLFYSVLAWLFITVLPPYFGLKGYAVNIGIGDIAQSVLVYLGIPFAGGFLSRLVLRRLKGDAWYERVFLPAISPITLVALLLTIVVMFSLKGELIVRIPFDVLRIALPLALYFGIMFVLSFVAGKYLGASYAENTSIAFTATGNNFELAIAVAIGVFGLNSGQAFAGVIGPLIEVPALIALVNLAFWFRRRYYGDSAPSPR
SIO_010081: D3Y59_RS17890
subclass of: SO_0000673
so part of: D3Y59_RS17890
location: complement(5142..6233)
location: region:5142-6233:-1
so has part: feature:5142-6233:-1:exon

WP_119446583.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5142-6233:-1:exon

D3Y59_RS17895
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17895
old locus tag: D3Y59_17895
so part of: sequence
location: complement(6239..6733)
location: region:6239-6733:-1
so has part: feature:6239-6733:-1:exon
subclass of: SO_0000010

position:6239:-1
position: 6239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6733:-1
position: 6733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6239-6733:-1:exon

D3Y59_RS17895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17895
old locus tag: D3Y59_17895
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018615858.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MTLQPFAPAHWPAAKAIYEAGIATGNATFATSAPSWEEWDRGHLPHSRLVALDDNGQVLGWAALSPVSSRCVYGGVGEVSVYVADAARGRGVGRQLLAALVRESEQHDMWTLQAGIFPENETSVRLHEATGFRLVGRRERIGKMGGQWRDTLLLERRSAEVGLT
SIO_010081: D3Y59_RS17895
subclass of: SO_0000673
so part of: D3Y59_RS17895
location: complement(6239..6733)
location: region:6239-6733:-1
so has part: feature:6239-6733:-1:exon

WP_119446584.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6239-6733:-1:exon

D3Y59_RS17900
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17900
old locus tag: D3Y59_17900
so part of: sequence
location: complement(6783..7361)
location: region:6783-7361:-1
so has part: feature:6783-7361:-1:exon
subclass of: SO_0000010

position:6783:-1
position: 6783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7361:-1
position: 7361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6783-7361:-1:exon

D3Y59_RS17900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17900
old locus tag: D3Y59_17900
inference: COORDINATES: protein motif:HMM:NF013098.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ArsI/CadI family heavy metal resistance metalloenzyme
translation: METSVFPRMHVSLYVSDLTATVNFYTAFFGQPATKIKPGYAKYVLDKPSLIISFVQNPERVASNFGHLGFQVETVQEMEQRLEVARRAGLVAREEMGTSCCYAKQDKFWVNDPDGVEWEVYYFHEDAEFNDPRYQAEYDQASGNSQCCIAPAAQQAPLAAEMLTTAPMAFTLVDATPATPAANACTPGGGCC
SIO_010081: D3Y59_RS17900
subclass of: SO_0000673
so part of: D3Y59_RS17900
location: complement(6783..7361)
location: region:6783-7361:-1
so has part: feature:6783-7361:-1:exon

WP_119446585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6783-7361:-1:exon

D3Y59_RS17905
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17905
old locus tag: D3Y59_17905
so part of: sequence
location: complement(7392..7739)
location: region:7392-7739:-1
so has part: feature:7392-7739:-1:exon
subclass of: SO_0000010

position:7392:-1
position: 7392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7739:-1
position: 7739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7392-7739:-1:exon

D3Y59_RS17905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17905
old locus tag: D3Y59_17905
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018477586.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloregulator ArsR/SmtB family transcription factor
translation: MTYAKTAAFTEEQQQLARVAKALAHPARVAIIQLLASKKTCISGDIAAELPLSRTTVSQHLQELKALDLIRGEIDGLTVCYCLNTELLRQVHQQFTAFFVESTANEACAPGGSCC
SIO_010081: D3Y59_RS17905
subclass of: SO_0000673
so part of: D3Y59_RS17905
location: complement(7392..7739)
location: region:7392-7739:-1
so has part: feature:7392-7739:-1:exon

WP_119446586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7392-7739:-1:exon

D3Y59_RS17910
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17910
old locus tag: D3Y59_17910
so part of: sequence
location: 8110..8919
location: region:8110-8919:1
so has part: feature:8110-8919:1:exon
subclass of: SO_0000010

position:8110:1
position: 8110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8919:1
position: 8919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8110-8919:1:exon

D3Y59_RS17910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17910
old locus tag: D3Y59_17910
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLSAYSWSQFGLFMLVVVLLYYLVVGLLYYRAELAPLLSLGKRGGGSTPAPTTAPPALVRPTSAFTPPQPAAAEAAPEAAAEEEGAAENLPPTTEAVVEGQLPASTATATGQDQSADDSAPMDAASASAEEQAAAQDQIRTEAPDQADERLAELVRREAHAEADPAAAADQPTELLDAEPALQQQLPVSYEPLASFEEPVASPLDIITAGPAPQLVAAESVSEYIALLQAGQNPPAPAGLQGSCLAEQMAQHLEEYQAELAALFGADEL
SIO_010081: D3Y59_RS17910
subclass of: SO_0000673
so part of: D3Y59_RS17910
location: 8110..8919
location: region:8110-8919:1
so has part: feature:8110-8919:1:exon

WP_119446587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8110-8919:1:exon

D3Y59_RS17915
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17915
old locus tag: D3Y59_17915
so part of: sequence
location: 8963..9280
location: region:8963-9280:1
so has part: feature:8963-9280:1:exon
subclass of: SO_0000010

position:8963:1
position: 8963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9280:1
position: 9280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8963-9280:1:exon

D3Y59_RS17915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17915
old locus tag: D3Y59_17915
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004378854.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4134 domain-containing protein
translation: MNQKRFSTSLAVLALLLSSHLLYAQTGGGNGTAGIQDATTQVTSYFDPLTKLMYAIGAVLGLVGAIKVYSKWNSGDQDTQKTAVSWFGSMIFLVIVATVVRSFFL
SIO_010081: D3Y59_RS17915
subclass of: SO_0000673
so part of: D3Y59_RS17915
location: 8963..9280
location: region:8963-9280:1
so has part: feature:8963-9280:1:exon

WP_119446588.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8963-9280:1:exon

D3Y59_RS17920
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17920
old locus tag: D3Y59_17920
so part of: sequence
location: 9292..9624
location: region:9292-9624:1
so has part: feature:9292-9624:1:exon
subclass of: SO_0000010

position:9292:1
position: 9292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9624:1
position: 9624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9292-9624:1:exon

D3Y59_RS17920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17920
old locus tag: D3Y59_17920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005834165.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4133 domain-containing protein
translation: MPVYDLNRGINKPVEFKGLVGSNIYFLVAGIGLVFALFVTCYLAGVPLALTVLLTFLAGGGMWAGVFALNRRFGEHGLMKAAARRSSPRYITNRHSRLFQRLNEDPPGRA
SIO_010081: D3Y59_RS17920
subclass of: SO_0000673
so part of: D3Y59_RS17920
location: 9292..9624
location: region:9292-9624:1
so has part: feature:9292-9624:1:exon

WP_119446589.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9292-9624:1:exon

D3Y59_RS17925
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17925
old locus tag: D3Y59_17925
so part of: sequence
location: 9651..12137
location: region:9651-12137:1
so has part: feature:9651-12137:1:exon
subclass of: SO_0000010

position:9651:1
position: 9651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12137:1
position: 12137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9651-12137:1:exon

D3Y59_RS17925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17925
old locus tag: D3Y59_17925
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007139564.1
GO component: GO:0032991 - protein-containing complex [Evidence IEA]
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0032196 - transposition [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraG family conjugative transposon ATPase
translation: MSNKVLPSVSLESKQPIYKVEKDCLVSKNADVTVAFRLELPEIFTLSREDYAQLQAAFVKAVRLLPDHCVVHKQDWYVEDKYAPGFEAERTLLSAAYERHFNERPFLNHFCYLYITKTSSERPNWGSTSGLLARRHIVPKDMLDTKVLESFFDSVGQFVRTLEGVGPTNAPFIRSHRLTSDELAGTQEKAGLLEKYLSLDLSDQALQVDLDLTNGLKVGQEFCQMFSVANLDDLPTSVETDIRYEAYSTQYSDFPISFAAPLGLLLGTSHILNQYVFLDNTQKTVKTFEQKKDRLNSLSLYSRQNAINVEYYHAFLNELITHKRRPVRVHCNVLTWGRSEEELAEVRKLVNAAFNQMNCKPRQNTVDIAALYWGGIPGNAGDFPSEETFYTFIEQAVCFWASETNYRSTGATKGIKLSDRLTGKPVLVDISDEPMKRQVIFNRNKFVLGPSGSGKSFFTNHMVRQYYEQGAHVLLVDTGNSYKGLCELVGGVYFTYEEDAPIAFNPFLISGKLDVEKKESIKTLLQALWKKDDEAVSQSEYVSLSTAVSLYYVMLEANPAIQPSFNTFYEFVKGTYRKVLEEEKVREKDFDIDNFLYVLGPYYRGGEYDYLLNSDKELDLVQAPFIVFELDNIKDHPILFPVVTLIIMETFISKMRKLKGVRKMILIEEAWKALTTPGMAAYIKYLFKTVRKFFGEAIVVTQEIDDIIGNEIVKDAIINNSDCKILLDQRKFINRFEEIQALLSLTPKEKDLVLSINRDNKPARGRYTEVFISLGGVVSKVYAIEVSKEEYVTYTTEETEKVRLFEKLRQTGDMPTAIKLFAAELREG
SIO_010081: D3Y59_RS17925
subclass of: SO_0000673
so part of: D3Y59_RS17925
location: 9651..12137
location: region:9651-12137:1
so has part: feature:9651-12137:1:exon

WP_119446590.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9651-12137:1:exon

D3Y59_RS18485
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS18485
so part of: sequence
location: 12181..12729
location: region:12181-12729:1
so has part: feature:12181-12729:1:exon
subclass of: SO_0000010

position:12181:1
position: 12181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12729:1
position: 12729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12181-12729:1:exon

D3Y59_RS18485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS18485
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLHLALPLALLSSCGSDTSPADSPAATAPAAGAPAPASAEVAAAQALADSLVALPAAEPADKAAARHYAQFVADWQGSDLDASVKEHPVVRSGWARYRYVLRAVARSRGLPRVQPEDVATWNGLAGRCETVATMLLALTKEPNVTATQALPTLLGFEGGTGQARFAAERHLKYLLHPQTRNQ
SIO_010081: D3Y59_RS18485
subclass of: SO_0000673
so part of: D3Y59_RS18485
location: 12181..12729
location: region:12181-12729:1
so has part: feature:12181-12729:1:exon

WP_205590909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12181-12729:1:exon

D3Y59_RS17935
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17935
old locus tag: D3Y59_17935
so part of: sequence
location: 12757..13410
location: region:12757-13410:1
so has part: feature:12757-13410:1:exon
subclass of: SO_0000010

position:12757:1
position: 12757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13410:1
position: 13410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12757-13410:1:exon

D3Y59_RS17935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17935
old locus tag: D3Y59_17935
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKKIILLSLALLGLSATRASAQLVVSAPLLEGQSAVQTGLQKTMKGLEAAANKLVAFGVKEQELTKTFARKNLEQHKEWYDGLLKVSAAVRDYRRVRSIYAKQTQIIQQYSDAINVLRTSPYITPQQLTQMTNVYAQLLGEGANTVADLRTVVSPAMLKMTDAERMEFIDQLDAKITDQLGLVSYFTRRNMLQLRAAQQIEQDRQTLLSFMGASAR
SIO_010081: D3Y59_RS17935
subclass of: SO_0000673
so part of: D3Y59_RS17935
location: 12757..13410
location: region:12757-13410:1
so has part: feature:12757-13410:1:exon

WP_119446591.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12757-13410:1:exon

D3Y59_RS17940
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17940
old locus tag: D3Y59_17940
so part of: sequence
location: 13426..14082
location: region:13426-14082:1
so has part: feature:13426-14082:1:exon
subclass of: SO_0000010

position:13426:1
position: 13426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14082:1
position: 14082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13426-14082:1:exon

D3Y59_RS17940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17940
old locus tag: D3Y59_17940
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTTSFFALLALLTLVARPARAQTVISAPISEQISRKQILHQGVSTTLKGRAKVLAGDIKQLSTAIKGITDQTQALHAQWYSSLLQISAGVRNYRRVREIYDAQAAMITQFSSGVTELRTRALTPAQITEASAMYQVLLQENVSLITELATIMTTNRAQMTDAQRLKFINRIADRMQQQQHLMTYYTNKCRAVAYQQQQARQDRASVLALIGAENAPR
SIO_010081: D3Y59_RS17940
subclass of: SO_0000673
so part of: D3Y59_RS17940
location: 13426..14082
location: region:13426-14082:1
so has part: feature:13426-14082:1:exon

WP_119446592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13426-14082:1:exon

D3Y59_RS17945
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17945
old locus tag: D3Y59_17945
so part of: sequence
location: 14122..15231
location: region:14122-15231:1
so has part: feature:14122-15231:1:exon
subclass of: SO_0000010

position:14122:1
position: 14122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15231:1
position: 15231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14122-15231:1:exon

D3Y59_RS17945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17945
old locus tag: D3Y59_17945
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDMNSITMQMLQMEQMLGRLYDSMLPLVAQFVTLGRAVGGIAALIFISSRVWGHIARAEPIDLYPLLRPFLIGLAILLFPQLLGGLRGITGALATSTDSVRTDQTARIDQLQQQKKALLARQPGNEYFATDEAYEKRLEELGGATGMSNLGQQAALGFDKLKYEVKQDFREWMKNTLELFHIAARLLVNVLATFLLIVLSVLGPLTFGIAIFPGFTGSIAKWLGQFVTISLWVPVANIFGAIMGQFQVMMLEADIGRLNTGAGVDSADFGYLVFLCIAIAGYLVIPFITDMMLAASGVSGVARAMQGALVGTAATAGAAAGTATRLGTAPAAVAAATGPAATDNRSWGEQLGHRAGTALRERVFGRRSA
SIO_010081: D3Y59_RS17945
subclass of: SO_0000673
so part of: D3Y59_RS17945
location: 14122..15231
location: region:14122-15231:1
so has part: feature:14122-15231:1:exon

WP_119446593.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14122-15231:1:exon

D3Y59_RS17950
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
gene: traK
locus tag: D3Y59_RS17950
old locus tag: D3Y59_17950
so part of: sequence
location: 15270..15884
location: region:15270-15884:1
so has part: feature:15270-15884:1:exon
subclass of: SO_0000010

position:15270:1
position: 15270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15884:1
position: 15884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15270-15884:1:exon

D3Y59_RS17950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
gene: traK
locus tag: D3Y59_RS17950
old locus tag: D3Y59_17950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008503811.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugative transposon protein TraK
translation: MFASLKTIDSAFQQVKTLALLFIVAVLVLAGTIAYFAFQTTTAAANRIYVLEGGQLLTAGARDARANRPVEARTHVTRFHELFFTLDPDQKAIDSNVNKALYLADNSAKRQYENFKEKGFYNDLIAANISLGMSVDSVVITNSRPLVARCYGHQRVIRATSVTTRNFLSECSLRDVTRSENNPHGFLMENWRVLRNEDLSTQPR
SIO_010081: D3Y59_RS17950
subclass of: SO_0000673
so part of: D3Y59_RS17950
location: 15270..15884
location: region:15270-15884:1
so has part: feature:15270-15884:1:exon

WP_119446594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15270-15884:1:exon

D3Y59_RS17955
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
gene: traM
locus tag: D3Y59_RS17955
old locus tag: D3Y59_17955
so part of: sequence
location: 15895..17094
location: region:15895-17094:1
so has part: feature:15895-17094:1:exon
subclass of: SO_0000010

position:15895:1
position: 15895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17094:1
position: 17094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15895-17094:1:exon

D3Y59_RS17955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
gene: traM
locus tag: D3Y59_RS17955
old locus tag: D3Y59_17955
inference: COORDINATES: protein motif:HMM:NF023922.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugative transposon protein TraM
translation: METKPHDAQFLRTRKMATFLPVVVVPFLAVMFYLGGGGQGAPAEAQSVPSGFNTSLPTAEKGSITASKLEAYASPVDTLRNRGLVDARLDTAAGSGLSYSIGADGKPGPNGSVDKSVVEAQQQLIAAQQAQLNGGTTPGTAVAPTTAAPGSLTPQEQLELMRSQHERELAEKDAQLQMAQLLAQSNSGGGGVARPAAPTAAKPKKKARTRAKVVDDDAVVSRLGSNGAGRRRTASFTGLYDGRAATEDANTLPAVIHESQEVVSGSLVKMRLTESAVVNGRALPANTFIYGKCSLAGERLNISIETLKTGNRVFPVALEVYDVDGLEGLHIPGAITRDAAKQAGADGLNAADAMTMSADPTLAAAGVAVTAVKGLGQKKIRLVKVRLKAGYQVMLKIDK
SIO_010081: D3Y59_RS17955
subclass of: SO_0000673
so part of: D3Y59_RS17955
location: 15895..17094
location: region:15895-17094:1
so has part: feature:15895-17094:1:exon

WP_119446595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15895-17094:1:exon

D3Y59_RS17960
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
gene: traN
locus tag: D3Y59_RS17960
old locus tag: D3Y59_17960
so part of: sequence
location: 17103..18263
location: region:17103-18263:1
so has part: feature:17103-18263:1:exon
subclass of: SO_0000010

position:17103:1
position: 17103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18263:1
position: 18263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17103-18263:1:exon

D3Y59_RS17960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
gene: traN
locus tag: D3Y59_RS17960
old locus tag: D3Y59_17960
inference: COORDINATES: protein motif:HMM:NF024982.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugative transposon protein TraN
translation: MRIVLALCTLPLSLAAMPAQAQSTTLASTRPIAPAAAAKLSTYPLYVSDQKTTHLVFPSPVTYVDLGSAGLIAAKATGSENIVRVKAAGSGFSETNMTVLTASGKLYSFVVGYQRNPRQLGLDLGPPNAGPAKLPVLPLYVSDQKTTHLVFPYPVTYVDLGNSGILAAKATGADNIVRVKAASNRLTETNMTVLTSGGKLYMFVVNYQHDPKVLSLDLSTPANSTAQAGSGSEAILSNTPIPQGNLDAYSQQALARGGSAASDTKNQFSVRAGSVGYQQETLFFPLHLRNRSNVTYDVDFVKFYIQDKKVAKRTAEQAIELTPTYVYNGNLKKIEAAGKLQQVFVFKKFTIPDQKNLVVEVYEKGGGRNIKLKLSNSDLLRARGFR
SIO_010081: D3Y59_RS17960
subclass of: SO_0000673
so part of: D3Y59_RS17960
location: 17103..18263
location: region:17103-18263:1
so has part: feature:17103-18263:1:exon

WP_119446596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17103-18263:1:exon

D3Y59_RS17965
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17965
old locus tag: D3Y59_17965
so part of: sequence
location: 18392..18580
location: region:18392-18580:1
so has part: feature:18392-18580:1:exon
subclass of: SO_0000010

position:18392:1
position: 18392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18580:1
position: 18580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18392-18580:1:exon

D3Y59_RS17965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17965
old locus tag: D3Y59_17965
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRILLLIALVIFLYSSWAPSWGAQVATWGLLLYFGYKFFRLSSSVMHRASRSPQDRYDPHNH
SIO_010081: D3Y59_RS17965
subclass of: SO_0000673
so part of: D3Y59_RS17965
location: 18392..18580
location: region:18392-18580:1
so has part: feature:18392-18580:1:exon

WP_119446597.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18392-18580:1:exon

D3Y59_RS17970
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17970
old locus tag: D3Y59_17970
so part of: sequence
location: 18766..19515
location: region:18766-19515:1
so has part: feature:18766-19515:1:exon
subclass of: SO_0000010

position:18766:1
position: 18766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19515:1
position: 19515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18766-19515:1:exon

D3Y59_RS17970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17970
old locus tag: D3Y59_17970
inference: COORDINATES: protein motif:HMM:NF040319.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6088 family protein
translation: MEKATKSTTARQKILNRLQKLEPGALVRYQDFASLGIAPGTVAVNLSRLRQEGLVQQVTKGTYRLPLQSRFGPVPVSEQQVLQVLLQTPSKKLRGYPTGVAAFNRLGLTTQVPQEIQIATSRPGRPKKVGNVRVRFVRSRADVKPEEVKLCQLLDALRQIKRLPDTSPAAALLRLREQIKQLPPNEQAALVRLAQDYNPATRALLGALLEGLGEAKLATKLKASLNPLSTYKLGLSEQALPNRAQWQIR
SIO_010081: D3Y59_RS17970
subclass of: SO_0000673
so part of: D3Y59_RS17970
location: 18766..19515
location: region:18766-19515:1
so has part: feature:18766-19515:1:exon

WP_119446598.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18766-19515:1:exon

D3Y59_RS17975
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17975
old locus tag: D3Y59_17975
so part of: sequence
location: 19500..20486
location: region:19500-20486:1
so has part: feature:19500-20486:1:exon
subclass of: SO_0000010

position:19500:1
position: 19500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20486:1
position: 20486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19500-20486:1:exon

D3Y59_RS17975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17975
old locus tag: D3Y59_17975
inference: COORDINATES: protein motif:HMM:NF020419.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyl transferase AbiEii/AbiGii toxin family protein
translation: MANPMTLHTHEQDFRNLITITAAARAMRQSFIEKDYWVTWVLRNLADSAVADHVVFKGGTSLSKGYGLIERFSEDVDLAVILQEQQSDGALKRLIRDIHKIAAGDLPEVDVPGSTSKRGHNRLVYHQYPHLFTDPVPTATEHILLEITAFGEPEPHSKRPLISYLGQYLLDYGQPEAVQEYGLAAFDFNVLSLARTFAEKIMALVRASYEEDPLAATGRKVRHLYDLHQLASQPEVAALLASPGLAQQLAAVQRDDARAGVIGPTREWKTKPLTACWAYAEEAANLRQLQQPYEQELPSLLHSPLPAFDQVLHIMQRIVQQLRAYDGL
SIO_010081: D3Y59_RS17975
subclass of: SO_0000673
so part of: D3Y59_RS17975
location: 19500..20486
location: region:19500-20486:1
so has part: feature:19500-20486:1:exon

WP_119446599.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19500-20486:1:exon

D3Y59_RS17980
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17980
old locus tag: D3Y59_17980
so part of: sequence
location: complement(20543..22288)
location: region:20543-22288:-1
so has part: feature:20543-22288:-1:exon
subclass of: SO_0000010

position:20543:-1
position: 20543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22288:-1
position: 22288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20543-22288:-1:exon

D3Y59_RS17980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17980
old locus tag: D3Y59_17980
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRGLLVDFTYLFSEPILPVEEYLSGISRLRRLQCVSHLLGYLSQVPAPTRNHISDMQQFFGAHNQRFADEVFDRAKVLQKQGHSRLSFLHPKTVLQLYNYCFELPDDPDTKSEAELEQSLFKACLVLNGPYIAEQDQASAAAKVLLPTQPLAAMTLALTFSDFELVNLRLLHVAVLQLIKSVRLFEFLEAEARFAPLLQGFLQRFGCRDWPEYFRRLSGVTKPVMQANNPGRISVEIPDTQPDFETDRAFLRHFALREGQILDKADFTSLRATPLVEETPGTFVLAYPVLVVEAMHKGLFFQFNSVNRSLPKSQRESDWRSVYCDLFSEQYLMYLLLDAIFQGRGLALSGRAIFEGWQLKGQSEPDYYFRHDNRAVLFESKDVWVNKVAKAGHDFATYLNEVKKKFYEDDKGHPKAARQLANNVKRLLCQKLPFDTSFDPAELIIYPVLVVHDRLYNQPGLNVVVNDWFQEELAKLEQQGLPVHNVRPLIIVDVDTLLAYHEDFRDGRMVFEDVLEEYLAYLQAPAWTGISEAEDEQRQMQSIHPFALFLENYAEKRDMLGIPKEMLYQVLPIINRGAKD
SIO_010081: D3Y59_RS17980
subclass of: SO_0000673
so part of: D3Y59_RS17980
location: complement(20543..22288)
location: region:20543-22288:-1
so has part: feature:20543-22288:-1:exon

WP_119446600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20543-22288:-1:exon

D3Y59_RS17985
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17985
old locus tag: D3Y59_17985
so part of: sequence
location: complement(22415..23038)
location: region:22415-23038:-1
so has part: feature:22415-23038:-1:exon
subclass of: SO_0000010

position:22415:-1
position: 22415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23038:-1
position: 23038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22415-23038:-1:exon

D3Y59_RS17985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17985
old locus tag: D3Y59_17985
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009283511.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
translation: MKADISVAHVLPPPAAHRLLIKNMVCPQCIRVVGEELAALGLQVHRVALGEADISTPDNAAPDYAAIRTSLQEAGFELLEDPRAQLVDRIKTLLVALIHYPPPGPRLLNYSAYLVEHLGKDYHYLSHLFSASEGLTIEKFIIRQKVERAKELIGYGELSMAEVAQQLGYSSPAHLSRQFRQVTGLTPTEFQKLGPASHARRSLDSLI
SIO_010081: D3Y59_RS17985
subclass of: SO_0000673
so part of: D3Y59_RS17985
location: complement(22415..23038)
location: region:22415-23038:-1
so has part: feature:22415-23038:-1:exon

WP_119446601.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22415-23038:-1:exon

D3Y59_RS17990
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17990
old locus tag: D3Y59_17990
so part of: sequence
location: complement(23050..23427)
location: region:23050-23427:-1
so has part: feature:23050-23427:-1:exon
subclass of: SO_0000010

position:23050:-1
position: 23050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23427:-1
position: 23427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23050-23427:-1:exon

D3Y59_RS17990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17990
old locus tag: D3Y59_17990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019949129.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cupredoxin domain-containing protein
translation: MDTTAFIVTIAGVGLAAFVIWYFFFSARQTASAVSMSGGVQEVAITVKGGYSPDVIEVERGKPVQLSFYRDEENSCSEELLMPDFNVRRDLPAFKTTLVELLPQQAGTFTFTCGMGMLRGNLVVK
SIO_010081: D3Y59_RS17990
subclass of: SO_0000673
so part of: D3Y59_RS17990
location: complement(23050..23427)
location: region:23050-23427:-1
so has part: feature:23050-23427:-1:exon

WP_119446602.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23050-23427:-1:exon

D3Y59_RS17995
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17995
old locus tag: D3Y59_17995
so part of: sequence
location: complement(23440..25704)
location: region:23440-25704:-1
so has part: feature:23440-25704:-1:exon
subclass of: SO_0000010

position:23440:-1
position: 23440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25704:-1
position: 25704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23440-25704:-1:exon

D3Y59_RS17995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17995
old locus tag: D3Y59_17995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019949130.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal translocating P-type ATPase
translation: MEPTTKTETLDIEGMTCASCAAFVEKSLSRTPGVQRAMVNFATEKATIDYVPTQASPASLKEAVVNAGYGVAERAPDTSAAERSAEIDRQKALAYQKLKHRFWVAVGLAVVIMPLSMLMLWPAMLQRVNMQWLNYALLLLTLPVLLYSGREFYVSAWNGFKHRAANMDTLIAVGTGAAFLYSLVATVVPGFFTRRGLMPEVYYDTTATIIALILLGKVLEMRAKTQTSAAIRSLMGLQAKTARVVRPDGAEVDVPVEQVQLGDIVLVRPGEKVATDGLITEGSSALDEAMLTGESLPVQKQPGDAVFGATLNKTGAFRFRVTKVGADTMLSQIVKLVEDAQGSRAPIQRLADKVSAIFVPTVVVIAILTFVLWFDLAPVEHRLPLALVNFVAVLIIACPCALGLATPTAIMVSTGKGAEHGVLIRNAEALEKAYQVNTVLLDKTGTITRGEPAVTDFVAPGQDAARLLQLVAAVERQSEHPLAEAVVRYADAQGAGTGAAADFRAVEGKGAAAAVEGQAVLIGNRRLLTDEGVVLSPALTAQAEQLLAQAKTVLYVAVAGQAVGLIGVADTVRDSSAAAIKQLQALGIEVVMMTGDNPQTAAQVAGQVGVARYFAEVLPQDKAGKVKQLQGEGRTVAMVGDGINDAPALAQADIGLAIGSGTDVAMEAAGITLMRSDLRGVVTAIELSRQTIRTIKQNLFFAFIYNTLGIPIAAGLLYPFFGILLSPMLAAGAMALSSVSVLTNSLRLRAFAAH
SIO_010081: D3Y59_RS17995
subclass of: SO_0000673
so part of: D3Y59_RS17995
location: complement(23440..25704)
location: region:23440-25704:-1
so has part: feature:23440-25704:-1:exon

WP_119446603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23440-25704:-1:exon

D3Y59_RS18000
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS18000
old locus tag: D3Y59_18000
so part of: sequence
location: complement(25839..26750)
location: region:25839-26750:-1
so has part: feature:25839-26750:-1:exon
subclass of: SO_0000010

position:25839:-1
position: 25839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26750:-1
position: 26750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25839-26750:-1:exon

D3Y59_RS18000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS18000
old locus tag: D3Y59_18000
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: trypsin-like peptidase domain-containing protein
translation: MAATPTPSSLLQEVKAHPLSIATAAILRSTIQFFYTRKGRIAACGSGVLLTVDNRFFVVTAAHVLAGQAYTTFVILPPNEVTLAGTLLTTSPPPPGRRQDDKIDLAVLELTDEGQIARLQESYQFLTLNELSTSPRHLTDVYLSVGFPAAKTRSFNGHVKTAPYPLQVQQTKEFDYAGLRLHPGTHLVLDFTGDVLSAANPQPHRRPKMEGISGSGLWDTGNFLLGDPAHERKLVGIVTEELTVRRHKHLLVTRTTVLLEFMRQSFKLNIPVSTTVKVNLGRGLQRLTDWQAKQAAAAATTSA
SIO_010081: D3Y59_RS18000
subclass of: SO_0000673
so part of: D3Y59_RS18000
location: complement(25839..26750)
location: region:25839-26750:-1
so has part: feature:25839-26750:-1:exon

WP_162910900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25839-26750:-1:exon

D3Y59_RS18005
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS18005
old locus tag: D3Y59_18005
so part of: sequence
location: 27139..27606
location: region:27139-27606:1
so has part: feature:27139-27606:1:exon
subclass of: SO_0000010

position:27139:1
position: 27139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27606:1
position: 27606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27139-27606:1:exon

D3Y59_RS18005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS18005
old locus tag: D3Y59_18005
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFRSLFPFRRLLATSFLLVFVNVFVGQCWCATVNPPQAARPVAAHHRAEKPTHPGCKGHGAVAGHHGKQGSHPAKPSRSHDCCKDKSASLLSALTSPAQKQLLVPAPALVPVTLEFHFRPAAGKWDRTRAVTLVPREHLPPKIPDIRIFIQSLTV
SIO_010081: D3Y59_RS18005
subclass of: SO_0000673
so part of: D3Y59_RS18005
location: 27139..27606
location: region:27139-27606:1
so has part: feature:27139-27606:1:exon

WP_119446605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27139-27606:1:exon

D3Y59_RS18010
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS18010
old locus tag: D3Y59_18010
so part of: sequence
location: 27911..28855
location: region:27911-28855:1
so has part: feature:27911-28855:1:exon
subclass of: SO_0000010

position:27911:1
position: 27911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28855:1
position: 28855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27911-28855:1:exon

D3Y59_RS18010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS18010
old locus tag: D3Y59_18010
inference: COORDINATES: protein motif:HMM:NF039593.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal-binding domain-containing protein
translation: MNRLLISALAAASLFTTVSCSSDSASSSATNTVTTPTGTEAGAAEHAGGHTYACPMHPEVTSTKPGEKCPKCGMELVHNDQVSNGKSYQMQFEPMPMQLVAGQPVTLTYTPQEVGNEKAPVPLAVVHEKRIHLIVVRKDLSAFYHEHPEFTADGNYKVLFTFAKGGDYVLFQDYTPAGAGHQLGRQVVSVQGPKYTPVKFSQDQLQWSQDGYQATLAFDKELKVGQLLGMKITIRKNGQPVTDLDNYLGALGHVVVISEDTENYLHVHPNEQTDKGPAIGFNTNFEKPGLYRVFLQFNHGGQIHTGDFTINVKG
SIO_010081: D3Y59_RS18010
subclass of: SO_0000673
so part of: D3Y59_RS18010
location: 27911..28855
location: region:27911-28855:1
so has part: feature:27911-28855:1:exon

WP_119446606.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27911-28855:1:exon

D3Y59_RS18015
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS18015
old locus tag: D3Y59_18015
so part of: sequence
location: 28905..29612
location: region:28905-29612:1
so has part: feature:28905-29612:1:exon
subclass of: SO_0000010

position:28905:1
position: 28905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29612:1
position: 29612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28905-29612:1:exon

D3Y59_RS18015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS18015
old locus tag: D3Y59_18015
inference: COORDINATES: protein motif:HMM:NF015658.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF305 domain-containing protein
translation: MKTSAFLLATLCSGTLLLGSCNSDNKADTTATETASAPAAGDMAGMDHSKMGGGAAGSSLLVASMNDMMSKMEAMPMKGNTDHDFAHMMLEHHKGAVAMADIELRDGKDATMRQMAEKIKADQQKEISELEAIAERLDSAPTNYKPKDPADPFTAQMKGSMDGMMKNMPPMVADADMNFNMLMTVHHQSAVDMAKAELAHGKDTKLKEMAQMMIDAQQKEIEQFKAWHAKNADKM
SIO_010081: D3Y59_RS18015
subclass of: SO_0000673
so part of: D3Y59_RS18015
location: 28905..29612
location: region:28905-29612:1
so has part: feature:28905-29612:1:exon

WP_119446607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28905-29612:1:exon

D3Y59_RS18020
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS18020
old locus tag: D3Y59_18020
so part of: sequence
location: 29668..30210
location: region:29668-30210:1
so has part: feature:29668-30210:1:exon
subclass of: SO_0000010

position:29668:1
position: 29668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30210:1
position: 30210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29668-30210:1:exon

D3Y59_RS18020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS18020
old locus tag: D3Y59_18020
inference: COORDINATES: protein motif:HMM:NF039593.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal-binding domain-containing protein
translation: MKFVRSLLAITLLAAPLSLFAQHTHQARAAHSHNAAGETHAHTAPHGGIVRTAGKYHVELVLAGSQMTVYLLDGNEQTLATKGLTGTAMVLQGGKTASVPLAPYGDNQLRGALPAGATPTTAIITLRRGGETISARFDKLASTSAKAKATSYICPMQCEGSASSKPGACPKCGMALVKKA
SIO_010081: D3Y59_RS18020
subclass of: SO_0000673
so part of: D3Y59_RS18020
location: 29668..30210
location: region:29668-30210:1
so has part: feature:29668-30210:1:exon

WP_119446608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29668-30210:1:exon

D3Y59_RS18025
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS18025
old locus tag: D3Y59_18025
so part of: sequence
location: 30315..31559
location: region:30315-31559:1
so has part: feature:30315-31559:1:exon
subclass of: SO_0000010

position:30315:1
position: 30315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31559:1
position: 31559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30315-31559:1:exon

D3Y59_RS18025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS18025
old locus tag: D3Y59_18025
inference: COORDINATES: protein motif:HMM:NF014385.2
GO function: GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TolC family protein
translation: MKYLKIKSRARAGLLLLGLLIGWLPARAQTTVIGLDSAEAQALRRHPRLRQSDEEIAEQRALKRGSFAPANPDFLWSAPTGEMWAPGVVQTIDLPNVYRRQRQIAQAGVVLAERNRDVSRATVLRDTRLAYLGLQFAEAQVRQYTYQDSLYRTLRLATERLFAAGEVTSLQRISTDAEARQATVQLQQATEDLRAAQRRLALLLGQPGTELTTSTDLRRSGPELAQAGAALLGTLPAADSSALVRSPTLAAATQNVALSQSGISLVRARRTPALTLGYQNQAFENSQLKYRFQFGVSVPIWFWTYRSQLQAATARSRAATYQLQTQRLELGTQYQQALADTRKFSASLTYYEQTGVPQSRAIISQSQRLFQAGEVSYLQLIMSLNQAFAIQNTYLTTIRDYRQALVELSYLQGE
SIO_010081: D3Y59_RS18025
subclass of: SO_0000673
so part of: D3Y59_RS18025
location: 30315..31559
location: region:30315-31559:1
so has part: feature:30315-31559:1:exon

WP_119446609.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30315-31559:1:exon