Hymenobacter oligotrophus strain sh-6 plasmid unnamed1, complete sequence.
type: Entry
definition: Hymenobacter oligotrophus strain sh-6 plasmid unnamed1, complete sequence.
sequence version: NZ_CP032318.1
sequence date: 2022-10-06
sequence: sequence
division: CON
label: NZ_CP032318.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN10031373
keyword: RefSeq
source: Hymenobacter oligotrophus
organism: Hymenobacter oligotrophus
taxonomy: Bacteria; Bacteroidota; Cytophagia; Cytophagales; Hymenobacteraceae; Hymenobacter.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP032318.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 3.0 AUGAUST-2018\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 187.42x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 10/06/2022 01:01:25\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 3,657\nCDSs (total) :: 3,596\nGenes (coding) :: 3,575\nCDSs (with protein) :: 3,575\nGenes (RNA) :: 61\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 46\nncRNAs :: 3\nPseudo Genes (total) :: 21\nCDSs (without protein) :: 21\nPseudo Genes (ambiguous residues) :: 0 of 21\nPseudo Genes (frameshifted) :: 5 of 21\nPseudo Genes (incomplete) :: 16 of 21\nPseudo Genes (internal stop) :: 1 of 21\nPseudo Genes (multiple problems) :: 1 of 21\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 42169
topology: circular
so has quality: SO_0000988
location: 1..42169
location: region:1-42169:1
RO_0002162: 2319843

NZ_CP032318
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN10031373
type: BioSample
SIO_000068: biosample

1
title: Hymenobacter medium sp. nov., isolated from R2A medium
author: Yingchao, G.
journal: Unpublished

2
title: Direct Submission
author: Yingchao, G.
journal: Submitted (11-SEP-2018) Wuhan Uiversity, College of Life Science, Guangba Road, Wuhan 430000, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42169:1
position: 42169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-42169:1:source
so part of: sequence
organism: Hymenobacter oligotrophus
mol type: genomic DNA
strain: sh-6
isolation source: R2A medium
type material: type material of Hymenobacter oligotrophus
plasmid: unnamed1
country: China
collection date: 2016

2319843
type: Taxonomy
SIO_000068: taxonomy

D3Y59_RS17680
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17680
old locus tag: D3Y59_17680
so part of: sequence
location: join(41940..42169,1..7)
location: region:1-42169:1
so has part: feature:41940-42169:1:exon
so has part: feature:1-7:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:41940-42169:1:exon

position:41940:1
position: 41940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-7:1:exon

position:7:1
position: 7
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

D3Y59_RS17680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17680
old locus tag: D3Y59_17680
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MNKTFGYARVSTLDQNLDTQLDILTKAGCDRIFQDKITGMSLQRPALDELLGLLREGDTVLVARFFRLGRSRDHVIQP
SIO_010081: D3Y59_RS17680
subclass of: SO_0000673
so part of: D3Y59_RS17680
location: join(41940..42169,1..7)
location: region:1-42169:1
so has part: feature:41940-42169:1:exon
so has part: feature:1-7:1:exon

WP_119446574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41940-42169:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-7:1:exon

D3Y59_RS17685
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17685
old locus tag: D3Y59_17685
so part of: sequence
location: complement(102..662)
location: region:102-662:-1
so has part: feature:102-662:-1:exon
subclass of: SO_0000010

position:102:-1
position: 102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662:-1
position: 662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102-662:-1:exon

D3Y59_RS17685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17685
old locus tag: D3Y59_17685
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014681690.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YeeE/YedE thiosulfate transporter family protein
translation: MLELLRQPWPWYIAGPLIGLTVPALLLIGNKALGISSSLRHVCAACVPAGIPFLTYNWRAELWNLFFVLGIGLGGFIGYQVLGHADTIAISPETVRDLKAQLHLTDFSGLLPKELFALENLSNWKGWVFLVLGGFLVGFGTRYAGGCTSGHAISGLSNLQWVSLVAVIGFFVGGLLMTWVFYPMMF
SIO_010081: D3Y59_RS17685
subclass of: SO_0000673
so part of: D3Y59_RS17685
location: complement(102..662)
location: region:102-662:-1
so has part: feature:102-662:-1:exon

WP_119446543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102-662:-1:exon

D3Y59_RS17690
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17690
old locus tag: D3Y59_17690
so part of: sequence
location: complement(757..1131)
location: region:757-1131:-1
so has part: feature:757-1131:-1:exon
subclass of: SO_0000010

position:757:-1
position: 757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1131:-1
position: 1131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757-1131:-1:exon

D3Y59_RS17690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17690
old locus tag: D3Y59_17690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009779119.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rhodanese-like domain-containing protein
translation: MSSLTLLLSFFAMFGLFQGASPAYKNLTPAQFSAALRQPGAVLLDVRRPDEFAGGHLPGAVNIDVTAPDFAQRVAALDKTKPTYVYCRSGARSANAAGQLTKSGFEHVSNLLGGVMDWPEKLVR
SIO_010081: D3Y59_RS17690
subclass of: SO_0000673
so part of: D3Y59_RS17690
location: complement(757..1131)
location: region:757-1131:-1
so has part: feature:757-1131:-1:exon

WP_119446544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:757-1131:-1:exon

D3Y59_RS17695
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17695
old locus tag: D3Y59_17695
so part of: sequence
location: complement(1198..2553)
location: region:1198-2553:-1
so has part: feature:1198-2553:-1:exon
subclass of: SO_0000010

position:1198:-1
position: 1198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2553:-1
position: 2553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1198-2553:-1:exon

D3Y59_RS17695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17695
old locus tag: D3Y59_17695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019948667.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rhodanese-like domain-containing protein
translation: MKIEQFEDKGLAHFSYAILSECAREIVLIDPARDPQPYYDYAKAHDAKIVSVIETHPHADFVSSHLEIAQQTGATIRVSKLLGADYNFEAFDEGDAFTVGKLTFRALNTPGHSPDSISIVVSREGKDEAVFTGDTLFIGDVGRPDLREKAGNMTAKREELAKQMYHSLRDKLMPLDGTVLVYPAHGAGSLCGKALSGANSSTIADEKFGNPMLRALTEEEFVKELLADQPFIPKYFGYDVALNKAGAPDYQPSVQQVKRLAAGTTLEAGVLVVDTRPEAEFKQGHVDGAINIQQGGKFETWLGSIVGPEESFYLVAADEATLEDLIRKTAKIGYEALIKGALVGTPATDATMPKMDVEQFRQHPEQYTIVDIRNATEHRDEPLFAGSLNIPLPELRERAQEIPTGKPVVVHCAGGYRSAAGSSIVADALPGTEVLDLSEAVKSFQSASAQH
SIO_010081: D3Y59_RS17695
subclass of: SO_0000673
so part of: D3Y59_RS17695
location: complement(1198..2553)
location: region:1198-2553:-1
so has part: feature:1198-2553:-1:exon

WP_119446545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1198-2553:-1:exon

D3Y59_RS17700
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17700
old locus tag: D3Y59_17700
so part of: sequence
location: complement(2637..3452)
location: region:2637-3452:-1
so has part: feature:2637-3452:-1:exon
subclass of: SO_0000010

position:2637:-1
position: 2637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3452:-1
position: 3452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2637-3452:-1:exon

D3Y59_RS17700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17700
old locus tag: D3Y59_17700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019948668.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfite exporter TauE/SafE family protein
translation: MLHIVGYFAAIFIGLSLGIMGGGGSILTVPVLVYLMGVSPVLSTAYSLFVVGSTSVVGASGYFRKGLVSLKTAVVFLIPSLLAVFAVRKLLMPAIPHELFTLGSLVFTKDLLVLVAFAVLMVVAATSMIRSKQAEEVLDEELHHKHAFNYPLILGIGLVVGTLTGFVGAGGGFLIIPALVLGARLPMKLAVGTSLAIIALNSLIGFTGDLSAGTPIAWTFLLGFLAFALMGIVLGTYLARFIPGAKLKPAFGWFTLAMGTFILLRELVFSH
SIO_010081: D3Y59_RS17700
subclass of: SO_0000673
so part of: D3Y59_RS17700
location: complement(2637..3452)
location: region:2637-3452:-1
so has part: feature:2637-3452:-1:exon

WP_205590908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2637-3452:-1:exon

D3Y59_RS17705
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17705
old locus tag: D3Y59_17705
so part of: sequence
location: complement(3524..3841)
location: region:3524-3841:-1
so has part: feature:3524-3841:-1:exon
subclass of: SO_0000010

position:3524:-1
position: 3524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3841:-1
position: 3841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3524-3841:-1:exon

D3Y59_RS17705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17705
old locus tag: D3Y59_17705
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015027247.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloregulator ArsR/SmtB family transcription factor
translation: MTPTPTSADLNLTTEKMEKVAFILKTTAHPTRIAIVQLLANQESLSVTDISEKLNVEQSLLSHHLTGMKLKGILSSHRDGKNIFYSLKMREVVDVIQCLAGCTFL
SIO_010081: D3Y59_RS17705
subclass of: SO_0000673
so part of: D3Y59_RS17705
location: complement(3524..3841)
location: region:3524-3841:-1
so has part: feature:3524-3841:-1:exon

WP_240410611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3524-3841:-1:exon

D3Y59_RS17710
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17710
old locus tag: D3Y59_17710
so part of: sequence
location: 4101..4769
location: region:4101-4769:1
so has part: feature:4101-4769:1:exon
subclass of: SO_0000010

position:4101:1
position: 4101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4769:1
position: 4769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4101-4769:1:exon

D3Y59_RS17710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17710
old locus tag: D3Y59_17710
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSKTVNPLSLLPKGRRFNANQAMKRKIASSFAADSNDFLWRVGLLKDNRPHDTTSFFAKLYVDLLMSAECALKSLIVSLSPASETPEDAYLKIRRIGHKLDKLYEEVERRASRRLKLLTPKQRALLMEANTIGVGYRYDITTFFFLSRESRLDRAFQQGPVSGILNYEFITAFYTMLHDLRDLAGTAERKRFGQLSPLTIKQLGKVNKREDDFFAAVGGRL
SIO_010081: D3Y59_RS17710
subclass of: SO_0000673
so part of: D3Y59_RS17710
location: 4101..4769
location: region:4101-4769:1
so has part: feature:4101-4769:1:exon

WP_162910893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4101-4769:1:exon

D3Y59_RS17715
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17715
old locus tag: D3Y59_17715
so part of: sequence
location: 4912..5283
location: region:4912-5283:1
so has part: feature:4912-5283:1:exon
subclass of: SO_0000010

position:4912:1
position: 4912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5283:1
position: 5283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4912-5283:1:exon

D3Y59_RS17715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17715
old locus tag: D3Y59_17715
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHRLLTHLLLLLYAGIYLHCQPLPARAPATTIGLGSPQEQSRTGLCKKKLQTVQADPQADHAQIAQAKLLPLDLALNSDFAALYFGLLFPADEPTLNPARGPNAGPEQSFANHPNKAPPVRFS
SIO_010081: D3Y59_RS17715
subclass of: SO_0000673
so part of: D3Y59_RS17715
location: 4912..5283
location: region:4912-5283:1
so has part: feature:4912-5283:1:exon

WP_119446547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4912-5283:1:exon

D3Y59_RS17720
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17720
old locus tag: D3Y59_17720
so part of: sequence
location: 5516..6940
location: region:5516-6940:1
so has part: feature:5516-6940:1:exon
subclass of: SO_0000010

position:5516:1
position: 5516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6940:1
position: 6940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5516-6940:1:exon

D3Y59_RS17720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17720
old locus tag: D3Y59_17720
inference: COORDINATES: protein motif:HMM:NF014385.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TolC family protein
translation: MFFPFVPPVRRLPAGSGWLLVALLLAGPVSQAQQRPVRPATGRPLSLKEALELARTQAPHLQAKAYQVQAAEAEITQTKTQRLPSVRLSGQVSYGSTNAVAGTMLPVGTIIPSSGSLSGVNSYNAVFGSMGTALAEWSPVTFGQYPAQRARAEAARSFAQADADNELFTQQLRVAQTYLDLLATQSLRRVREQDVQRVAVLHKTITRLTLHGLRPGVDSTLARATAAQSQLALLTVREQEADRQARLSTLLGQPGAIRQPDTLYNQLLPPALAPPAATHPTLGLQQRAIDLGQARETVIRRQYRPRLSLLGATWGRGSGLGYNGQTDYGLGGAAPTRFNYAVGVGVVFDLLDWPRVQAQAKAENLRTQGLQAEYRQQQLELSNQATLAQERLQLAAERARQAPLQLAAARQAYRQKLALYNSGLATVVDVTQALYGLQQAEQDQVLTANAAWQAVLLQTAAAGDFSFFFNHVTP
SIO_010081: D3Y59_RS17720
subclass of: SO_0000673
so part of: D3Y59_RS17720
location: 5516..6940
location: region:5516-6940:1
so has part: feature:5516-6940:1:exon

WP_119446548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5516-6940:1:exon

D3Y59_RS17725
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17725
old locus tag: D3Y59_17725
so part of: sequence
location: 6945..10103
location: region:6945-10103:1
so has part: feature:6945-10103:1:exon
subclass of: SO_0000010

position:6945:1
position: 6945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10103:1
position: 10103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6945-10103:1:exon

D3Y59_RS17725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17725
old locus tag: D3Y59_17725
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020604907.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux RND transporter permease subunit
translation: MYELIRSALQRPLTVVVAMLAILFFAFAAVRDIAVDIFPSMDVPAIYVAEPYGGLSPEQLDGFMANQFQNNFLFVSGVKKIETKSIQGLTLIKLSFYPGTDMAQAAAEVATQVSRATAFMPLGTLPPQVVRFDASSLPVGQLVLESEKSSLTQLQDLAASRIRPMFTTIPGVTSTAPFGGNIRTIVVKADPAKLRGYQLTPDDVVKAIVASNQPSAAGNVKMGDVAYMAPVNSLIENPADFLDVPLRTGAGPGVYLRDVATVEDAADVTTGYAVINGKRAIYMPVIKKADASTLKVVQQVKDKLPTLRALLPEDVKLSYAFDQSTYVANSLKSLVTEGILGAVLTGLMVLLFLRDWRSVVIVVTTIPLSVLSAVILLKLFGQTLNIMTLSGLALAIGVLVDEATVTIENIHQHLERGKPKAQAIWDAAREIALPKLLILLCILAVFAPALIMEGVPRAMFLPLSLAVGFAMVASFLLSQTLVPVMANWLMRDHALGTGHGHDEPAEKPSFFARFQAGYQRLLVRAQGRQRGVVLGYLTLSVLVVVAGFAFIGTDIFPQANSGQFQLRLREKVGTRLEKTEQTVAAVQALINQEVGPENVEISSTFVGTQPASFAVNSVFVFTTGPHEALMQVALKEGVHVNLSQLKERLRKRIHAAQPGLQLSFEPIELVEKVMSDGAPTPIQVNVGGKNLKEAAGHARKVLAALRQIPYLRDVQIAQPLQYPALRIEVDRERAAQFGLTSQEITQSVVAATSSSRFTSKNLWLDPKSGLGYQVQVQLTEDQLTQLQDLEALPVKAGQARPTIGEVATVSARMMAGQIDRQGPYRLVSITANVQDRDLGTAAQAVRQALQQVGEPPRGVVANLVGQPQLLADTMSSLQTGLGMAIVVIFLLLAANFQSFRLSLVVLSVVPAVVGGSLLMLLAAGATLNLQSYMGMIMSVGVSVANAILLITSAEHQRHEHRDVPLAARLSADTRVRPILMTSIAMLAGMLPMASGLGEGGDQIAPLGQAVIGGLIASTLASLLVLPHVFGWAMRRVGYDSGSLLPARTRQAA
SIO_010081: D3Y59_RS17725
subclass of: SO_0000673
so part of: D3Y59_RS17725
location: 6945..10103
location: region:6945-10103:1
so has part: feature:6945-10103:1:exon

WP_119446549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6945-10103:1:exon

D3Y59_RS17730
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17730
old locus tag: D3Y59_17730
so part of: sequence
location: 10127..11296
location: region:10127-11296:1
so has part: feature:10127-11296:1:exon
subclass of: SO_0000010

position:10127:1
position: 10127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11296:1
position: 11296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10127-11296:1:exon

D3Y59_RS17730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17730
old locus tag: D3Y59_17730
inference: COORDINATES: protein motif:HMM:TIGR01730.1
GO function: GO:0005215 - transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux RND transporter periplasmic adaptor subunit
translation: MNAFLNIRIRSPRNFSLLATGLLLSGALGSCSSGASEPAAEKPMPAAPATVTTFRLTDAPAVRRLRLPAELKPFEQVDLFPRVGAFVKQVLVDRGARVTKGQTLAILEAPELAAQLARARSRWQAAQAKLSGTRASYERLLRTSQEPGTISPNDLERARAEMQADQANVQAAYSELQVSRELSNYLVVRAPFSGTITARNVSAGALVGPGGGQPAAPLFSLENSRTLRLEVAVPEAAAGQWLQPGAKVPFTVPAFPGQTFTGVFRRNASRLSQTVRSELVEMDVANPDGRLKAGMYAQVLVALPTDAKALAVPTSAVFASPDVPKQAQVVRVQQGRAQWVPVRKGQLLSRDTVVVFGPLSPGDELVREAAEQVPDGQPVTVAKAKPTGV
SIO_010081: D3Y59_RS17730
subclass of: SO_0000673
so part of: D3Y59_RS17730
location: 10127..11296
location: region:10127-11296:1
so has part: feature:10127-11296:1:exon

WP_119446550.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10127-11296:1:exon

D3Y59_RS17735
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17735
old locus tag: D3Y59_17735
so part of: sequence
location: 11349..11951
location: region:11349-11951:1
so has part: feature:11349-11951:1:exon
subclass of: SO_0000010

position:11349:1
position: 11349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11951:1
position: 11951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11349-11951:1:exon

D3Y59_RS17735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17735
old locus tag: D3Y59_17735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019946792.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TlpA disulfide reductase family protein
translation: MNRKTLSQWLPLAVFALVLFTPLRTPVLGFLQRGLLATGLWKADAPAQPASSAEPTPIVATGGAAYPHNLPLVTLDGKHANLSDLKGKVVFVNLWASWCPPCVAEMPGIHALYQKMDPKKVAFVMLSLDENPAKAQAMLKRQGYTFPVYFPAGPLAPPFDSNSIPSTVILAPDGQVAARHDGMAEYDTPEFKAALEKLAR
SIO_010081: D3Y59_RS17735
subclass of: SO_0000673
so part of: D3Y59_RS17735
location: 11349..11951
location: region:11349-11951:1
so has part: feature:11349-11951:1:exon

WP_162910894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11349-11951:1:exon

D3Y59_RS17740
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17740
old locus tag: D3Y59_17740
so part of: sequence
location: complement(12185..12877)
location: region:12185-12877:-1
so has part: feature:12185-12877:-1:exon
subclass of: SO_0000010

position:12185:-1
position: 12185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12877:-1
position: 12877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12185-12877:-1:exon

D3Y59_RS17740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17740
old locus tag: D3Y59_17740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008249967.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VIT family protein
translation: MRHDENHRTHRIGWLRAAVLGANDGIISTASLVVGVAAANASREAVLVAGVAGLVAGAMSMATGEYVSVSSQADTEQADMAREKAELAADPAAEHRELAAIYVERGLTQSLADEVAKQLMAHDALGTHARDELGITETAAANPVQAALASAGTFTVGAALPLLVILVSPVQQLTWTVSITSLVFLAALGGLAAYVGGSSVLKAAVRVTSWGVLAMGLTALVGYLFNVTPA
SIO_010081: D3Y59_RS17740
subclass of: SO_0000673
so part of: D3Y59_RS17740
location: complement(12185..12877)
location: region:12185-12877:-1
so has part: feature:12185-12877:-1:exon

WP_119446551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12185-12877:-1:exon

D3Y59_RS17745
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17745
old locus tag: D3Y59_17745
so part of: sequence
location: complement(13018..13794)
location: region:13018-13794:-1
so has part: feature:13018-13794:-1:exon
subclass of: SO_0000010

position:13018:-1
position: 13018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13794:-1
position: 13794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13018-13794:-1:exon

D3Y59_RS17745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17745
old locus tag: D3Y59_17745
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005796426.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transporter
translation: MPHAAAHSSTILLFSLLPVLVMVAGATLAVWRAPGPALRSAILHFAAGVVFSVVAVELLPDIVRQHAPLEVGLGFGLGVATMFGLRQLTRKLEDANAPSTPEPTTAASTPAAPSRLPWGLLVGVGIDIFIDGLLLGIGFAAGAKEGTLLAVALTIELLSLGLATAVQLREDGHGKAQTVGIVAGTSLLLLAGAGLGTTLLSGASGNLLEIVLSFGLAALLFLVTEELLLEAHEEPESPWLTSAFFVGFLLFLLLGMLV
SIO_010081: D3Y59_RS17745
subclass of: SO_0000673
so part of: D3Y59_RS17745
location: complement(13018..13794)
location: region:13018-13794:-1
so has part: feature:13018-13794:-1:exon

WP_240410612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13018-13794:-1:exon

D3Y59_RS17750
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17750
old locus tag: D3Y59_17750
pseudo: true
so part of: sequence
location: complement(13861..15986)
location: region:13861-15986:-1
so has part: feature:13861-15986:-1:exon
subclass of: SO_0000010

position:13861:-1
position: 13861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15986:-1
position: 15986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13861-15986:-1:exon

D3Y59_RS17750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17750
old locus tag: D3Y59_17750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019946788.1
GO function: GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: heavy metal translocating P-type ATPase
SIO_010081: D3Y59_RS17750
subclass of: SO_0000673
so part of: D3Y59_RS17750
location: complement(13861..15986)
location: region:13861-15986:-1
so has part: feature:13861-15986:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13861-15986:-1:exon

D3Y59_RS17755
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17755
old locus tag: D3Y59_17755
so part of: sequence
location: complement(16035..16649)
location: region:16035-16649:-1
so has part: feature:16035-16649:-1:exon
subclass of: SO_0000010

position:16035:-1
position: 16035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16649:-1
position: 16649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16035-16649:-1:exon

D3Y59_RS17755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17755
old locus tag: D3Y59_17755
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLELLTGALLLSLLHATIPNHWAPVLAVARAEKWPVRRAVGVTAVAGLAHVLSTVGIGLALGLLGWHLSGRFAQVAAWIAPVLLIGIGLLYAFSGPGHTHPDPAPVRPRRSARKVVLGLAATMFLAPCLEIQTFFLAAGTHGPAALALLMGLYLLATVSAMCALVALAHRGLGRLPLNGLAHHERRLTGAVLVLVGVANFFVDW
SIO_010081: D3Y59_RS17755
subclass of: SO_0000673
so part of: D3Y59_RS17755
location: complement(16035..16649)
location: region:16035-16649:-1
so has part: feature:16035-16649:-1:exon

WP_119446553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16035-16649:-1:exon

D3Y59_RS17760
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17760
old locus tag: D3Y59_17760
so part of: sequence
location: complement(16679..17866)
location: region:16679-17866:-1
so has part: feature:16679-17866:-1:exon
subclass of: SO_0000010

position:16679:-1
position: 16679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17866:-1
position: 17866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16679-17866:-1:exon

D3Y59_RS17760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17760
old locus tag: D3Y59_17760
inference: COORDINATES: protein motif:HMM:TIGR01730.1
GO function: GO:0005215 - transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux RND transporter periplasmic adaptor subunit
translation: MNKIASLSLLLSLTLMASCGKDKPTEAETNTTETAPAGKDGGTESTEAASDVVTLSPAEQQAGGIKTGRIADRPMGAGLAVNGTLDVPPESSLSITAPLGGYVQSTELLQGSRVRKGEVLAVIRNPEFVTLQQAYLETRSRLKFAQAELARQKELYQQEVAPLKNYQRAQAEVEALQVQTSAQAARLRIAGLPVGGGIVTTAALRAPRAGFVRAVNVTVGQSVTATEPLFEIVDPEHLHVELTVFERDVARVQKGQLIRFTLASDSTGKPHTRTAHVYLVGKAIGADRTVRVHGHLDKENDPALLPGLYVRALIETGRTNAPTLPNAALVRFEGQQYAFAVEQPGRYRMVPVKPGRSEDDFTEVTLPETVPATTTFVTEGAYSLLAKLKNAEEEE
SIO_010081: D3Y59_RS17760
subclass of: SO_0000673
so part of: D3Y59_RS17760
location: complement(16679..17866)
location: region:16679-17866:-1
so has part: feature:16679-17866:-1:exon

WP_119446554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16679-17866:-1:exon

D3Y59_RS17765
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17765
old locus tag: D3Y59_17765
so part of: sequence
location: complement(17891..22300)
location: region:17891-22300:-1
so has part: feature:17891-22300:-1:exon
subclass of: SO_0000010

position:17891:-1
position: 17891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22300:-1
position: 22300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17891-22300:-1:exon

D3Y59_RS17765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17765
old locus tag: D3Y59_17765
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019949149.1
GO component: GO:0016021 - integral component of membrane [Evidence IEA]
GO function: GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CusA/CzcA family heavy metal efflux RND transporter
translation: MFDRLIHFSIHNKLIIGLLTLALVAWGGYSLSRLPIDAVPDITTNQVVVYTVAPSLAAGDIERLVSFPVEQSVATIPGREEVRSFSRFGLSVVTIVFQDKVDIYWARQQVAERLREAESQIPQGVGRPELAPVSTGLGEVYQYLVRAKPGYEKKYDARELRTIQDWIVRRQLLGTPGVADVSSFGGLLKQYEIALDPARLRSLNVTVDQVYQAVARNNQNAGGAYIDQKPTAYYIRTEGLAENGADLGNIVVRNTQGGLPVLVRDVAQVRLGSAVRYGAMTRNNEGEVTGGIVLMLKGANANEVIQAVKQRMETVRKSLPEGVTIDVYLDRSDLVGRAIGTVEKNLAEGALIVIFVLVLFLGNWRAGLVVASVIPLAMLFAISMMRLFGVSGNLLSLGAIDFGLVVDGAVIIVEAIVHRLHRHAGVAAHPDGEQGRLTSGQMNEATYEAASQIRSSAAFGEIIILIVYLPLLALAGIEGKMFRPMAETVAFAIIGAFILSLTYVPMMSALALSRHTEHKRNFSDRMMGWLEARYRPVLEWALRRRALVLGSAVALFAGSLLLFRTLGGEFIPQLAEGDFAIEMRTLTGSSLSYTVDKGLQAGGILKKQFPEVKEVVARIGAAEIPTDPMPVEAADVMVVLEKDQRKWTSANTQEELAEKMAAALSVIPGVTFGFQQPIQMRFNELISGAKQDVVLKIYGEDLQLLGRYANQAAALVRQVEGAEDVYVEQVTGLPQIVVKLDRNRLARFGLNADDVNRTVQTAFAGQSAGQLFEQERRFDVVLRLAPELRQSIDNVRQLLIATPAGEQVPLEQVATVDLQEGPNQIQRDDAKRRISVAFNVRGRDVESIVEELQGQVDRQLKMAPGYYTTYGGQFENLRQATERLSIAVPVALLLIFVLLFFTFRSFKQSVMIFTAIPLSAIGGVVALWLRGMPFSISAGVGFIALFGVAVLNGIVLIGYFNQLKAEGMSNLYHRILTGTQVRLRPVLMTATVASLGFLPMALSTSAGAEVQRPLATVVIGGLVTATLLTLLVLPVLYALSERKQTASPKPTAPVPAALLVVVLALGGLLGPTPTQAQGSLTSTQAVSQALQANGTVQAAQRALEAQQALRRTTYDVGRTTLLGTYGQVNSPLSDNVVSIGQSLALPGYYKAQAGLSQALIAGREQQLAQVQAELRRQVRRSYEQAVFARHRLRTLRGQDSIYSEFLRSAQLRFKTGEVARLEPANAIIQQGETQNLLAQAQADYVIARRQLQALLQAPQLVAVADSTLQRLPAPAGGDTALLAATPQARALRQQIAERQAETRLEQAQGLPQVTVGYTNQSLRGTYEVDGRPQTYGTGDRFQSVQAGVAIPLLRGPQKARVQAAKLQEQAAAATYQRYQAEAAAQLDELRTRLQEQQRRVQFYEQTALPQAAVIVRLSQRAYKAGETTYSELLLNLERALAVRTAYLDAVLQHNHTVIDLDYLLGTAAQ
SIO_010081: D3Y59_RS17765
subclass of: SO_0000673
so part of: D3Y59_RS17765
location: complement(17891..22300)
location: region:17891-22300:-1
so has part: feature:17891-22300:-1:exon

WP_119446555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17891-22300:-1:exon

D3Y59_RS17770
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17770
old locus tag: D3Y59_17770
so part of: sequence
location: complement(22486..22815)
location: region:22486-22815:-1
so has part: feature:22486-22815:-1:exon
subclass of: SO_0000010

position:22486:-1
position: 22486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22815:-1
position: 22815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22486-22815:-1:exon

D3Y59_RS17770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17770
old locus tag: D3Y59_17770
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRLLALFFAFYFALLSGMSCSDEASVCKDPTQTTVAAASHSDCGADALGDWCSPFCQCHCCGGAVMPLVPTPALATAPLPEWATTQRHAHLVVAAPTRGSGAVWQPPQA
SIO_010081: D3Y59_RS17770
subclass of: SO_0000673
so part of: D3Y59_RS17770
location: complement(22486..22815)
location: region:22486-22815:-1
so has part: feature:22486-22815:-1:exon

WP_119446556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22486-22815:-1:exon

D3Y59_RS17775
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17775
old locus tag: D3Y59_17775
so part of: sequence
location: complement(22911..23630)
location: region:22911-23630:-1
so has part: feature:22911-23630:-1:exon
subclass of: SO_0000010

position:22911:-1
position: 22911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23630:-1
position: 23630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22911-23630:-1:exon

D3Y59_RS17775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17775
old locus tag: D3Y59_17775
inference: COORDINATES: protein motif:HMM:NF024946.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transporter
translation: MSTDRPDVTESAYSLDAGHLQVETDVVRFGTRRFGVNTSQEELALNHANVKLGLTSRLDVQLVVESYTRQTERPTNRAEPSTYRAGFGDLTLRLKRNLWGNDGGRSALAVMPFIKLPTGRSCGNRAWEGGVVVPFALQLPRDWSLGSQLQTTLIRDEDSGYNCVELAPTVTVGHDLYKTLGGFVELAGSWDTREQGRSLTVNGGPIWRVSDNLQLDLGINYPLTADTETTYFLGVSFRR
SIO_010081: D3Y59_RS17775
subclass of: SO_0000673
so part of: D3Y59_RS17775
location: complement(22911..23630)
location: region:22911-23630:-1
so has part: feature:22911-23630:-1:exon

WP_162910895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22911-23630:-1:exon

D3Y59_RS17780
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17780
old locus tag: D3Y59_17780
so part of: sequence
location: 24110..24334
location: region:24110-24334:1
so has part: feature:24110-24334:1:exon
subclass of: SO_0000010

position:24110:1
position: 24110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24334:1
position: 24334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24110-24334:1:exon

D3Y59_RS17780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17780
old locus tag: D3Y59_17780
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSARRNLREVLNHPAFSPERRRKAEPLLSACTDAAQLLRWKLLALQESEAWEDAQLAREIQELGPAAHPDYLY
SIO_010081: D3Y59_RS17780
subclass of: SO_0000673
so part of: D3Y59_RS17780
location: 24110..24334
location: region:24110-24334:1
so has part: feature:24110-24334:1:exon

WP_119446558.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24110-24334:1:exon

D3Y59_RS17785
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17785
old locus tag: D3Y59_17785
so part of: sequence
location: 24367..25275
location: region:24367-25275:1
so has part: feature:24367-25275:1:exon
subclass of: SO_0000010

position:24367:1
position: 24367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25275:1
position: 25275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24367-25275:1:exon

D3Y59_RS17785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17785
old locus tag: D3Y59_17785
inference: COORDINATES: protein motif:HMM:NF037521.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zincin-like metallopeptidase domain-containing protein
translation: MKNAPAAAPRADVYDIITNRIILALKSGVAPWKQSWNAAHGAPRNYRSKHVYQGINALLLAMLQHEHPYYLTYNQAKELGGQVRKGEKGMPVVFFKVSKKEDAQGKEKKVAILQYSTVFNIAQIDGVDWKLPEPVQREHTPQQAAEQIVASYAGGPRICYAGNEPHYRTSTDTVTVPEPANFHTPEDFYTTLFHELAHSTGHAKRLDRSTLTEKAAFGSETYAKEELVAELGATFLSNAAGLNLAVTEPSTAAYLANWLQALRNDKRLIISAASQAQKAANHILGIVPSYEADSAEALPEAA
SIO_010081: D3Y59_RS17785
subclass of: SO_0000673
so part of: D3Y59_RS17785
location: 24367..25275
location: region:24367-25275:1
so has part: feature:24367-25275:1:exon

WP_119446559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24367-25275:1:exon

D3Y59_RS17790
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17790
old locus tag: D3Y59_17790
so part of: sequence
location: 25405..25812
location: region:25405-25812:1
so has part: feature:25405-25812:1:exon
subclass of: SO_0000010

position:25405:1
position: 25405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25812:1
position: 25812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25405-25812:1:exon

D3Y59_RS17790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17790
old locus tag: D3Y59_17790
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSSSASAARQPTLSPTAWAGEPQACPAWVGFPSLAGFPAGLQWSGRGAVPAIGDRVHIYLNGFGPAEVKAYFHAEGFLGVVCAPEVLPAWFQRQCPGVTLGHCFGRELEPYQPMPAPVVGSPDDWIPDYPPQDE
SIO_010081: D3Y59_RS17790
subclass of: SO_0000673
so part of: D3Y59_RS17790
location: 25405..25812
location: region:25405-25812:1
so has part: feature:25405-25812:1:exon

WP_162910896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25405-25812:1:exon

D3Y59_RS17795
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17795
old locus tag: D3Y59_17795
so part of: sequence
location: complement(25921..26862)
location: region:25921-26862:-1
so has part: feature:25921-26862:-1:exon
subclass of: SO_0000010

position:25921:-1
position: 25921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26862:-1
position: 26862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25921-26862:-1:exon

D3Y59_RS17795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17795
old locus tag: D3Y59_17795
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019949660.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MSTPVTASTPSTGVEIRQHNAITTARYEMSAVEMDIVFSLLSVLRKEDKPGTIYRIRVKELEQMTGRSWNYQRLLEATSNLRSREYVIEDNKHVLQVGLLASALYVKGEGIIELEISERMRRYLIDLKNNFTSYRLQSVFSLSSKYAKRIYQIASQWKDIGETKTFTLDEFKIMLSLKDPKGHEPEQYEKISALQKYVLDVATTQINEHTDLRINYELIKKGRSFHSIRFFVNGQVPQQLPIPFEDGAEEEKQRRALLNLEELEIRDPKLVSQILGDAKKLNALFSFCYKHKTGKVKADKNPGGLFLKMVGLR
SIO_010081: D3Y59_RS17795
subclass of: SO_0000673
so part of: D3Y59_RS17795
location: complement(25921..26862)
location: region:25921-26862:-1
so has part: feature:25921-26862:-1:exon

WP_119446561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25921-26862:-1:exon

D3Y59_RS18690
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS18690
so part of: sequence
location: 28128..28484
location: region:28128-28484:1
so has part: feature:28128-28484:1:exon
subclass of: SO_0000010

position:28128:1
position: 28128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28484:1
position: 28484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28128-28484:1:exon

D3Y59_RS18690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS18690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004069457.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDKSAPNSPEIVEEAYIILLQLGGRRFLAMTGADRLLAAGRTATNPNPWLRMNLRRNEAGVNRLKITLMPNDTYTVEFYHQQLVDCEAVITRKQTFDLVYGEDLPGLFTSVTGYATHL
SIO_010081: D3Y59_RS18690
subclass of: SO_0000673
so part of: D3Y59_RS18690
location: 28128..28484
location: region:28128-28484:1
so has part: feature:28128-28484:1:exon

WP_240410610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28128-28484:1:exon

D3Y59_RS17810
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17810
old locus tag: D3Y59_17810
so part of: sequence
location: 28496..28786
location: region:28496-28786:1
so has part: feature:28496-28786:1:exon
subclass of: SO_0000010

position:28496:1
position: 28496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28786:1
position: 28786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28496-28786:1:exon

D3Y59_RS17810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17810
old locus tag: D3Y59_17810
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKATQAPTICHPDWNRFRSRVIAAVTDVEAQMQQLGKSLNYEGLACEVAPRLGLEIDTPDDFDVLEKLVRAIRPIAQEALRCTREDQGGQFALVLL
SIO_010081: D3Y59_RS17810
subclass of: SO_0000673
so part of: D3Y59_RS17810
location: 28496..28786
location: region:28496-28786:1
so has part: feature:28496-28786:1:exon

WP_119446563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28496-28786:1:exon

D3Y59_RS17815
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17815
old locus tag: D3Y59_17815
so part of: sequence
location: 28891..29223
location: region:28891-29223:1
so has part: feature:28891-29223:1:exon
subclass of: SO_0000010

position:28891:1
position: 28891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29223:1
position: 29223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28891-29223:1:exon

D3Y59_RS17815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17815
old locus tag: D3Y59_17815
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTPKSSPPSVHVQPLEREQLPVAPVACSSLAELIHSLGTRKEVAEAWKVVPRTLALRMQKPETATLEELQRLAVLARLDLPTVFELAYYQMQHPVAVPAPQLGRPKQQH
SIO_010081: D3Y59_RS17815
subclass of: SO_0000673
so part of: D3Y59_RS17815
location: 28891..29223
location: region:28891-29223:1
so has part: feature:28891-29223:1:exon

WP_162910897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28891-29223:1:exon

D3Y59_RS17820
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17820
old locus tag: D3Y59_17820
so part of: sequence
location: 29469..29825
location: region:29469-29825:1
so has part: feature:29469-29825:1:exon
subclass of: SO_0000010

position:29469:1
position: 29469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29825:1
position: 29825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29469-29825:1:exon

D3Y59_RS17820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17820
old locus tag: D3Y59_17820
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEAECPVVVPLPFPDLQLTVSYAEALCYAQGRLKMLGSGGLKPFCAAHQLTYPNIINLKNGKLKREEPRLLQRLLGCLAVPTELLQYPLDSKTPCFLLPDAGALTTFRDQLQFLTKAE
SIO_010081: D3Y59_RS17820
subclass of: SO_0000673
so part of: D3Y59_RS17820
location: 29469..29825
location: region:29469-29825:1
so has part: feature:29469-29825:1:exon

WP_162910898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29469-29825:1:exon

D3Y59_RS17825
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17825
old locus tag: D3Y59_17825
so part of: sequence
location: 29898..30200
location: region:29898-30200:1
so has part: feature:29898-30200:1:exon
subclass of: SO_0000010

position:29898:1
position: 29898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30200:1
position: 30200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29898-30200:1:exon

D3Y59_RS17825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17825
old locus tag: D3Y59_17825
inference: COORDINATES: protein motif:HMM:NF037437.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antitoxin VbhA family protein
translation: MQEPITYSEREKTPAQRQELIDNARAWSVAQGAVPSARAEALYARYVAGEMTLQGVTEELRRQDAPRVAAAAAQAAFGTNDTGITTPRRAEMQPEQDFLT
SIO_010081: D3Y59_RS17825
subclass of: SO_0000673
so part of: D3Y59_RS17825
location: 29898..30200
location: region:29898-30200:1
so has part: feature:29898-30200:1:exon

WP_119446566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29898-30200:1:exon

D3Y59_RS17830
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17830
old locus tag: D3Y59_17830
so part of: sequence
location: 30273..31358
location: region:30273-31358:1
so has part: feature:30273-31358:1:exon
subclass of: SO_0000010

position:30273:1
position: 30273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31358:1
position: 31358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30273-31358:1:exon

D3Y59_RS17830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17830
old locus tag: D3Y59_17830
inference: COORDINATES: protein motif:HMM:NF014691.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MAIQDGFFNARDQVIYNRLGITNAEQLRQVEADYSIPIMAQLLAGTLEIPGQFNAAHLKQIHRTLFQDVYDWAGQTRAHGPEGPFQGQKPAFVLNPQGDMMRYAPYAQLDQRLDAIGAQLQQENTLRGLSPAQFAERAAYYFDQYNHAHAFREGNGRTIQGVLAVLGRQAGYQVELKPAAAAQLNNARDLAIIRPHGPGQPVKNLEPLTLLLRSGITPLPGPEAVHWRDPSQARPLTEPTPAMQRMEAQRVLQASAYVIGAALRDIDRGDTTRGNQLLQQMTLVLHDPARAGEQSASLQQAALEVSKHPMLRQEAPLMQQAVALAHSVQQLVQLDSLARKKTQNQSPSDTVAAPKRRGPRL
SIO_010081: D3Y59_RS17830
subclass of: SO_0000673
so part of: D3Y59_RS17830
location: 30273..31358
location: region:30273-31358:1
so has part: feature:30273-31358:1:exon

WP_119446567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30273-31358:1:exon

D3Y59_RS17835
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17835
old locus tag: D3Y59_17835
so part of: sequence
location: complement(31362..32711)
location: region:31362-32711:-1
so has part: feature:31362-32711:-1:exon
subclass of: SO_0000010

position:31362:-1
position: 31362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32711:-1
position: 32711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31362-32711:-1:exon

D3Y59_RS17835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17835
old locus tag: D3Y59_17835
inference: COORDINATES: protein motif:HMM:NF025386.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4236 domain-containing protein
translation: MGFSFRKSISFGPMRVNLSTRGIGYSAGVKGARIGVNQRGTYVSLGAGGIQYRKYLQHTTPHSPSYPPAPLPTAQGHLHTITSDEITQLSDVDSQDFINELTEKAAKISFAKWGTLALALLLGVGLFSYFGQVTRTEETIIPKVEITASSGIKIRQQPDPEAPVVGSAIYGSMLPLTDSTMNHWYGVSTGQYVSKKFARIARVPEVKQYLRLDEQPGLFWTGLAFCLAAVLAAYIYLARIDKRRLTLEINYEFNDDLAQVHADFLKAFGQISNSHRVWQYLHSERINDRRRNAGASNAISRIGLGGVSLNRKPTRHLQTNVPIPYLGLRNTELYFFPERLVIRRNNQFAAVFYKNLHLISRDSTFIEDGSVPSDATIVGHTWRYVNKSGSPDRRFNNNRQIPKCAYSEYVFRSGTGVYEVITTSRRGALDLFTRYIAAIGEVQQRMNLN
SIO_010081: D3Y59_RS17835
subclass of: SO_0000673
so part of: D3Y59_RS17835
location: complement(31362..32711)
location: region:31362-32711:-1
so has part: feature:31362-32711:-1:exon

WP_119446568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31362-32711:-1:exon

D3Y59_RS17840
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17840
old locus tag: D3Y59_17840
so part of: sequence
location: 32882..33730
location: region:32882-33730:1
so has part: feature:32882-33730:1:exon
subclass of: SO_0000010

position:32882:1
position: 32882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33730:1
position: 33730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32882-33730:1:exon

D3Y59_RS17840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17840
old locus tag: D3Y59_17840
inference: COORDINATES: protein motif:HMM:NF024491.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospholipase D-like domain-containing protein
translation: MKILQPHQISSEVLEVIHSAQQYLILVSPYVKLTQWQQLAAALTAAKGRGVRIDFFVRNDPDNAGSWEQVEALGLKARLVSNLHAKFYFSETSGVISSMNLLASSNSNSIEIGCKLETQTELDELKSFVKRFVVPHEMTERPTEADLYLTKERFSVALEHYIADQTRRDARVTFQKDEFEIRAVSNTFFLYVDKATNRLFLSAIVSEAEASVFEARRSMFFTSPAFRYELDRGDRGHYSMVEGAYQPRLSTAYLDNLRLPEKKQLIAEVMTFIKSVRAFKDA
SIO_010081: D3Y59_RS17840
subclass of: SO_0000673
so part of: D3Y59_RS17840
location: 32882..33730
location: region:32882-33730:1
so has part: feature:32882-33730:1:exon

WP_119446569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32882-33730:1:exon

D3Y59_RS17850
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17850
old locus tag: D3Y59_17850
so part of: sequence
location: complement(34427..35341)
location: region:34427-35341:-1
so has part: feature:34427-35341:-1:exon
subclass of: SO_0000010

position:34427:-1
position: 34427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35341:-1
position: 35341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34427-35341:-1:exon

D3Y59_RS17850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17850
old locus tag: D3Y59_17850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013406981.1
GO function: GO:0004527 - exonuclease activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exonuclease domain-containing protein
translation: MKFIAIDFETATADRDSACEVGLAFVEDGQVTSTRSWLVKPPSYPYFDSFNISIHGIQPADVADQPTWAELWPELQPLLEGQLLVAHNAGFDFSVLRRTMEAYELPFPSLQYVCSYIFSKKVWSGLPAYDLRTLCKFHGIPLQHHRAASDAHACAQLALKTFAHAGVTSRDDFAEKLLTTIGQLHPDGYHPCITRRIYPSKDPSLIKGDPAKHKPDNLFYGRSVVFTGTLSSMQRASAQQLIADIGGINSNGVTKDTSFLVVGQQDYRVVGDDGMSSKQEKAVKLIAKGAPLEILSELDFLRNL
SIO_010081: D3Y59_RS17850
subclass of: SO_0000673
so part of: D3Y59_RS17850
location: complement(34427..35341)
location: region:34427-35341:-1
so has part: feature:34427-35341:-1:exon

WP_119446571.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34427-35341:-1:exon

D3Y59_RS17855
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17855
old locus tag: D3Y59_17855
so part of: sequence
location: complement(35458..38511)
location: region:35458-38511:-1
so has part: feature:35458-38511:-1:exon
subclass of: SO_0000010

position:35458:-1
position: 35458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38511:-1
position: 38511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35458-38511:-1:exon

D3Y59_RS17855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17855
old locus tag: D3Y59_17855
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012929343.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
translation: MAARFLSGFIGINRHSDPDISDLSCARRDATALWSLWQDTLPDATPMLLVDEEATRSRIDELLTQTLDAATDDDVVLLTFSGHGTHNHRLVAHDTNIEDLAGTTVSMADLATRFRQSKARHILLVLDCCFSGGAPAKVIEDGLQPRGGGFSLESAFSGRGRMLLAAANVDEEAWEAAGHGLLTSALTAALRAATGPVEVGGLMAEVAGRVRAEAQRLGLTQTPKWVGDIDGGFTIPPLQAGRHYYQAFPEQTGLKVSENIQDLMGFGLPEEVVQLWDQQFSQGLNELQLGAVNDYRILDGESLLVVAPTSSGKTFIGELAAVKAAVSTQRAVFLVPYKALANEKYEQFSDFYGTRLGLRVVRCTGDYQDATNAFVRGKYDIALLTYEMFLNLVVKNQGALNRIGVVVVDEAQFITDPSRGISVELLLTYILSARERGITPQLVALSAVIGNTNGFEHWLRCQAMITTRRPVPLEEGVIDRSGVFEYVDPDTGLQQKRQLLSAHAVQIRRDKASTQDVIVPLAQALLAQQPTAKLIVFRNIRGKAEGVAGYLAKDLGLPSADAVIAALPAQDRSSTSTRLRDCLRGGTAFHNSNLSREEREVVERAFRDQQGPVRVLGATTTVAAGINTPASAVILGETEFLGEDQKPFTIAEYKNMVGRAGRLGYNERGQSFIVANTPMERRQLFQHYVLGQPEALRSSFSNGNLSTWVLRLLAQISRVGRREVATLLANTYGGYIAGRNNPDWRPQMDAQVENIIISLIRASIVEQEGSMLQLTLVGFACANSSLSFDSILRLLHLLQKLNPATVSLERLLALTQALPELDDTYTPLFKNGNKEKTWPYHAAHKIGNDLVQLYQISLPDQVAYLRRAKRALLVEAWLQGDSLEDLEQAYTNSPFVPVSYGDVRRIVDATRYHFRSVVPIVQALHPMVLLEDDALNLLTTRLEVGLPASALPLLKVAALNRGEILLLAHHNIVDPSQAWAAVEPIANKLFGPERSQVIGTSWEKQQLASLAKAAPAS
SIO_010081: D3Y59_RS17855
subclass of: SO_0000673
so part of: D3Y59_RS17855
location: complement(35458..38511)
location: region:35458-38511:-1
so has part: feature:35458-38511:-1:exon

WP_119446572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35458-38511:-1:exon

D3Y59_RS17860
type: Gene
subclass of: SO_0000704
RO_0002162: 2319843
locus tag: D3Y59_RS17860
old locus tag: D3Y59_17860
so part of: sequence
location: complement(38826..41789)
location: region:38826-41789:-1
so has part: feature:38826-41789:-1:exon
subclass of: SO_0000010

position:38826:-1
position: 38826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41789:-1
position: 41789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38826-41789:-1:exon

D3Y59_RS17860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2319843
locus tag: D3Y59_RS17860
old locus tag: D3Y59_17860
inference: COORDINATES: protein motif:HMM:NF033527.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MILPFLTAPERQSYQQVPATLSESDLRQHFHLTAADRELIQRQRRDGNRLGCAVQLGLVRLMGYLPEDWFEQVPAPVAAFVGQQLGIAPEALAAYGERAATRSEHLQLVLRHLSYRKWQPLDSPGLEAWLLERALEHDQPRLLLQAACQKLHQDRLLRPAISVLELLVSQALLQTDAATYQRLGPLLTPAVEARLDALLAVDPALRVTPHRWLCQPATANTPAAINQALAKLDFLHQLGLADWDTGGLNANRRKRLAHRARHRTSQAIGRYAPAKRYPLLVAFVLESYRDVLDAVLTMFSDYWAGAQRKAQREHEAHLQAIRQARETALRVFAQVARTVVDEQIPAGLVREAVFETIPREQVEQALQAYYALSDTRLDSPLAFLLRRYAHLKQFSANLLRQVSFASAFAGDRFAEALTLVVELQTGARRKLPADAPTDFITPSWHGFVHPQQVPERLPYELCVLATLRERLRSGDVFVPGSRKYADLESYLIPAAQWPGLRGEVLRQLGLPEDPRQRLHARLAELEALLPQVTALLAEGGEVRLEAGELVVTALEAEELPDSLRVLDEHIRARMPVVELTDILVEVDGWTGFSELLREASAGTVDDPEPVYAALLAAACNIPLSDMARSTGLDYQTVWWATHQFLHEQPLRAATTRVVNQQHRQWLARHWGGGGLSSSDGQRFPVSGAVRNAKALPRYFGYGRGVTFYTHTADHYAQYGSKVIPATERDATYVLDEVLGNETDVVILEHATDTHGYTDLIFGLFDLLGLQYSPRLRDIGDQKLCRIRGRELSYPGLHFTGHVQPGYIEARLDDLLRVAGSFKLGYVTASLFISKLQAYPRQHNLTYVLQQYGRLIKTNFILRYLLHQPLRRKIHVQLNKGEQLHAMRVFLWFGGDGLIRRKQEEAQQEVVSALNLVTNLVVLWNTVYLQQVVQTLRAEGVEVRDEDLARLSPARYEHINRLGKYTFPRQVEVQPNGLRSLRKPLETA
SIO_010081: D3Y59_RS17860
subclass of: SO_0000673
so part of: D3Y59_RS17860
location: complement(38826..41789)
location: region:38826-41789:-1
so has part: feature:38826-41789:-1:exon

WP_119446573.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38826-41789:-1:exon