Tolypothrix tenuis PCC 7101 plasmid plasmid2 DNA, complete genome.
Bacteria; Cyanobacteriota; Cyanophyceae; Nostocales; Tolypothrichaceae; Tolypothrix.
Genome sequencing of cyanobaciteial culture collection at National Institute for Environmental Studies (NIES)
Submitted (23-JUN-2017) Contact:Yuu Hirose Toyohashi University of Technology, Department of Environmental and Life Sciences; Hibarigaoka-1-1 Tenpakucho, Toyohashi, Aichi 441-8122, Japan
REFSEQ INFORMATION: The reference sequence was derived from\nAP018250.\nNBRP Genome Information Upgrading Program.: Genome sequencing of\ncyanobaciteial culture collection at National Institute for\nEnvironmental Studies (NIES).\n\nAnnotated using prokka 1.11 from http://www.vicbioinformatics.com.\nAnnotated at D-FAST https://dfast.nig.ac.jp\n\nAnnotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (released 2013). Information about the Pipeline can be\nfound here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: GS De Novo Assembler v. 2.9\nGenome Coverage :: 55x\nSequencing Technology :: Ilumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Date :: 09/28/2017 13:20:53\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS+\nAnnotation Software revision :: 4.2\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 7,460\nCDS (total) :: 7,369\nGenes (coding) :: 7,118\nCDS (coding) :: 7,118\nGenes (RNA) :: 91\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 72\nncRNAs :: 4\nPseudo Genes (total) :: 251\nPseudo Genes (ambiguous residues) :: 7 of 251\nPseudo Genes (frameshifted) :: 42 of 251\nPseudo Genes (incomplete) :: 186 of 251\nPseudo Genes (internal stop) :: 48 of 251\nPseudo Genes (multiple problems) :: 30 of 251\nCRISPR Arrays :: 18\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS+
Derived by automated computational analysis using gene prediction method: GeneMarkS+.
COORDINATES: similar to AA sequence:RefSeq:WP_011316698.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010994004.1
phage terminase large subunit family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010994005.1
COORDINATES: similar to AA sequence:RefSeq:WP_017740811.1
COORDINATES: similar to AA sequence:RefSeq:WP_010994007.1
COORDINATES: similar to AA sequence:RefSeq:WP_017314025.1
COORDINATES: protein motif:HMM:PF00271.29
COORDINATES: similar to AA sequence:RefSeq:WP_006634663.1
DUF2791 family P-loop domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015198006.1
COORDINATES: similar to AA sequence:RefSeq:WP_015198007.1
COORDINATES: similar to AA sequence:RefSeq:WP_015328998.1
COORDINATES: similar to AA sequence:RefSeq:WP_012408906.1
COORDINATES: similar to AA sequence:RefSeq:WP_012408907.1
COORDINATES: similar to AA sequence:RefSeq:WP_012408908.1
BREX-6 system adenine-specific DNA-methyltransferase PglX
COORDINATES: similar to AA sequence:RefSeq:WP_012632492.1
COORDINATES: similar to AA sequence:RefSeq:WP_015329007.1
COORDINATES: similar to AA sequence:RefSeq:WP_015329008.1
COORDINATES: similar to AA sequence:RefSeq:WP_015329009.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869176.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869175.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869174.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869173.1
incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010999645.1
RNA-guided endonuclease TnpB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017307653.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307654.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869169.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869168.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869164.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307664.1
COORDINATES: protein motif:HMM:PF13238.4
COORDINATES: similar to AA sequence:RefSeq:WP_019914319.1
COORDINATES: similar to AA sequence:RefSeq:WP_013301522.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_016876043.1
COORDINATES: similar to AA sequence:RefSeq:WP_016877634.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869160.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869159.1
COORDINATES: protein motif:HMM:PF13374.4
COORDINATES: similar to AA sequence:RefSeq:WP_015129122.1
COORDINATES: similar to AA sequence:RefSeq:WP_017308251.1
COORDINATES: similar to AA sequence:RefSeq:WP_017308252.1
COORDINATES: protein motif:HMM:PF14279.4
COORDINATES: similar to AA sequence:RefSeq:WP_016869158.1
COORDINATES: similar to AA sequence:RefSeq:WP_017308255.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307475.1
COORDINATES: similar to AA sequence:RefSeq:WP_012413367.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993845.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993846.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307478.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316880.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993848.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307575.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364272.1
COORDINATES: similar to AA sequence:RefSeq:WP_012412427.1
COORDINATES: similar to AA sequence:RefSeq:WP_017656170.1
COORDINATES: similar to AA sequence:RefSeq:WP_015162916.1
COORDINATES: similar to AA sequence:RefSeq:WP_015364270.1
COORDINATES: similar to AA sequence:RefSeq:WP_016871571.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307599.1
incomplete; partial in the middle of a contig; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_016869148.1
COORDINATES: similar to AA sequence:RefSeq:WP_006196382.1
reverse transcriptase domain-containing protein
incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017307485.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869146.1
COORDINATES: similar to AA sequence:RefSeq:WP_017740895.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307488.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993860.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869142.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307491.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869140.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869139.1
COORDINATES: similar to AA sequence:RefSeq:WP_016877657.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869137.1
COORDINATES: similar to AA sequence:RefSeq:WP_012409736.1
type IV secretion system DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016877661.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316855.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307499.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008184783.1
COORDINATES: similar to AA sequence:RefSeq:WP_016869132.1
internal stop; incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017307501.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993873.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307503.1
COORDINATES: similar to AA sequence:RefSeq:WP_016877668.1
COORDINATES: similar to AA sequence:RefSeq:WP_015113292.1
COORDINATES: similar to AA sequence:RefSeq:WP_016877475.1
COORDINATES: similar to AA sequence:RefSeq:WP_016863683.1
frameshifted; incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010993916.1
COORDINATES: similar to AA sequence:RefSeq:WP_019501319.1
COORDINATES: similar to AA sequence:RefSeq:WP_016863686.1
COORDINATES: similar to AA sequence:RefSeq:WP_016863687.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993918.1
isoprenylcysteine carboxylmethyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017307545.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993920.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993921.1
COORDINATES: similar to AA sequence:RefSeq:WP_016877571.1
COORDINATES: similar to AA sequence:RefSeq:WP_016879206.1
COORDINATES: similar to AA sequence:RefSeq:WP_016863694.1
COORDINATES: similar to AA sequence:RefSeq:WP_016863695.1
COORDINATES: similar to AA sequence:RefSeq:WP_016863696.1
COORDINATES: similar to AA sequence:RefSeq:WP_011320915.1
COORDINATES: similar to AA sequence:RefSeq:WP_016863698.1
COORDINATES: similar to AA sequence:RefSeq:WP_006635801.1
COORDINATES: similar to AA sequence:RefSeq:WP_015955932.1
COORDINATES: similar to AA sequence:RefSeq:WP_017744757.1
COORDINATES: similar to AA sequence:RefSeq:WP_016863699.1
heavy metal-responsive transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_016863700.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993966.1
heavy-metal-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016863702.1
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_016863703.1
COORDINATES: similar to AA sequence:RefSeq:WP_016863706.1
COORDINATES: similar to AA sequence:RefSeq:WP_016863707.1
COORDINATES: similar to AA sequence:RefSeq:WP_017655367.1
COORDINATES: similar to AA sequence:RefSeq:WP_016877587.1
COORDINATES: similar to AA sequence:RefSeq:WP_016877572.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307554.1
COORDINATES: similar to AA sequence:RefSeq:WP_015132054.1
COORDINATES: similar to AA sequence:RefSeq:WP_015132053.1
COORDINATES: similar to AA sequence:RefSeq:WP_017286528.1
COORDINATES: similar to AA sequence:RefSeq:WP_015328542.1
four-helix bundle copper-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016869117.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316840.1
COORDINATES: similar to AA sequence:RefSeq:WP_015198003.1
COORDINATES: similar to AA sequence:RefSeq:WP_016877671.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316837.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316836.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307515.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316834.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307517.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316832.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307519.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307520.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316828.1
type I restriction-modification system subunit M
COORDINATES: similar to AA sequence:RefSeq:WP_015163176.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307524.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993897.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316825.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993899.1
COORDINATES: similar to AA sequence:RefSeq:WP_016877439.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993901.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307529.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993903.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993904.1
COORDINATES: similar to AA sequence:RefSeq:WP_012413077.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307532.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316784.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316783.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307535.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993909.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316779.1
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_015174316.1
COORDINATES: similar to AA sequence:RefSeq:WP_012531667.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316729.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316728.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307615.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993973.1
COORDINATES: similar to AA sequence:RefSeq:WP_017740774.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993975.1
relaxase/mobilization nuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011316723.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316722.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316721.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316720.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307622.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993978.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307624.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316717.1
COORDINATES: similar to AA sequence:RefSeq:WP_015111325.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993982.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307628.1
COORDINATES: similar to AA sequence:RefSeq:WP_015111322.1
Rpn family recombination-promoting nuclease/putative transposase
COORDINATES: similar to AA sequence:RefSeq:WP_015111321.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316711.1
COORDINATES: similar to AA sequence:RefSeq:WP_015111320.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316709.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010993990.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316707.1
COORDINATES: similar to AA sequence:RefSeq:WP_010993992.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316705.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307638.1
COORDINATES: similar to AA sequence:RefSeq:WP_017307639.1
COORDINATES: similar to AA sequence:RefSeq:WP_011316701.1
COORDINATES: similar to AA sequence:RefSeq:WP_010994001.1