Peromyscus maniculatus bairdii strain BW stock mitochondrion, complete genome.
type: Entry
definition: Peromyscus maniculatus bairdii strain BW stock mitochondrion, complete genome.
sequence version: NC_039921.1
sequence date: 2023-04-03
sequence: sequence
division: ROD
label: NC_039921.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Peromyscus maniculatus bairdii (prairie deer mouse)
organism: Peromyscus maniculatus bairdii
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus.
reference: 1
reference: 2
reference: 3
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence is identical to MH260579.\n\n##Assembly-Data-START##\nAssembly Method :: CLC Genomics Workbench Assembly Cell v. 10\nCoverage :: 13517x\nSequencing Technology :: Illumina HiSeq 4000 PE100\n##Assembly-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 16322
topology: circular
so has quality: SO_0000988
location: 1..16322
location: region:1-16322:1
RO_0002162: 230844

NC_039921
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: Complete mitochondrial genome of a Peromyscus maniculatus bairdii mouse at the Peromyscus Genetic Stock Center
author: Barbour, A.G.
author: Cook, V.J.
author: Kaza, V.
author: Kiaris, H.
journal: Unpublished

2
title: Direct Submission
journal: Submitted (03-DEC-2018) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Barbour, A.G.
author: Cook, V.J.
journal: Submitted (26-APR-2018) Microbiology and Molecular Genetics, University of California Irvine, 843 Health Sciences Court, Irvine, CA 92697, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16322:1
position: 16322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16322:1:source
so part of: sequence
organism: Peromyscus maniculatus bairdii
organelle: mitochondrion
mol type: genomic DNA
strain: BW stock
isolation source: Liver
sub species: bairdii
country: USA:MI
collection date: 2017
collected by: Hippokratis Kiaris and Vimala Kaza
note: outbred; BW Stock at Peromyscus Genetic Stock Center of the University of South Carolina. Closed colony since 1948; started from 40 founders captured near Ann Arbor, MI.

230844
type: Taxonomy
SIO_000068: taxonomy

EI127_mgt01
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: trnF
locus tag: EI127_mgt01
so part of: sequence
location: 1..68
location: region:1-68:1
so has part: feature:1-68:1:exon
subclass of: SO_0000663

39105349
type: Gene
SIO_000068: ncbigene

position:68:1
position: 68
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-68:1:exon

EI127_mgt01
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 230844
gene: trnF
locus tag: EI127_mgt01
product: tRNA-Phe
SIO_010081: EI127_mgt01
subclass of: SO_0000673
so part of: EI127_mgt01
location: 1..68
location: region:1-68:1
so has part: feature:1-68:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1-68:1:exon

EI127_mgr02
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: RNR1
locus tag: EI127_mgr02
so part of: sequence
location: 71..1024
location: region:71-1024:1
so has part: feature:71-1024:1:exon
subclass of: SO_0000573

39105342
type: Gene
SIO_000068: ncbigene

position:71:1
position: 71
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024:1
position: 1024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71-1024:1:exon

EI127_mgr02
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 230844
gene: RNR1
locus tag: EI127_mgr02
product: 12S ribosomal RNA
SIO_010081: EI127_mgr02
subclass of: SO_0000673
so part of: EI127_mgr02
location: 71..1024
location: region:71-1024:1
so has part: feature:71-1024:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71-1024:1:exon

EI127_mgt02
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: trnV
locus tag: EI127_mgt02
so part of: sequence
location: 1025..1096
location: region:1025-1096:1
so has part: feature:1025-1096:1:exon
subclass of: SO_0000663

39105331
type: Gene
SIO_000068: ncbigene

position:1025:1
position: 1025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1096:1
position: 1096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1025-1096:1:exon

EI127_mgt02
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 230844
gene: trnV
locus tag: EI127_mgt02
product: tRNA-Val
SIO_010081: EI127_mgt02
subclass of: SO_0000673
so part of: EI127_mgt02
location: 1025..1096
location: region:1025-1096:1
so has part: feature:1025-1096:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1025-1096:1:exon

EI127_mgr01
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: RNR2
locus tag: EI127_mgr01
so part of: sequence
location: 1095..2626
location: region:1095-2626:1
so has part: feature:1095-2626:1:exon
subclass of: SO_0000573

39105334
type: Gene
SIO_000068: ncbigene

position:1095:1
position: 1095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2626:1
position: 2626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1095-2626:1:exon

EI127_mgr01
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 230844
gene: RNR2
locus tag: EI127_mgr01
product: 16S ribosomal RNA
SIO_010081: EI127_mgr01
subclass of: SO_0000673
so part of: EI127_mgr01
location: 1095..2626
location: region:1095-2626:1
so has part: feature:1095-2626:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1095-2626:1:exon

EI127_mgt03
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: trnL1
locus tag: EI127_mgt03
so part of: sequence
location: 2667..2741
location: region:2667-2741:1
so has part: feature:2667-2741:1:exon
subclass of: SO_0000663

39105359
type: Gene
SIO_000068: ncbigene

position:2667:1
position: 2667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2741:1
position: 2741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2667-2741:1:exon

EI127_mgt03
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 230844
gene: trnL1
locus tag: EI127_mgt03
product: tRNA-Leu
SIO_010081: EI127_mgt03
subclass of: SO_0000673
so part of: EI127_mgt03
location: 2667..2741
location: region:2667-2741:1
so has part: feature:2667-2741:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2667-2741:1:exon

EI127_mgp13
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: ND1
locus tag: EI127_mgp13
so part of: sequence
location: 2742..3696
location: region:2742-3696:1
so has part: feature:2742-3696:1:exon
subclass of: SO_0000010

39105338
type: Gene
SIO_000068: ncbigene

position:2742:1
position: 2742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3696:1
position: 3696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2742-3696:1:exon

EI127_mgp13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 230844
gene: ND1
locus tag: EI127_mgp13
note: similar to INSD accession ASN66849 of P. polionotus;TAA stop codon is completed by the addition of 3' A residues to the mRNA'
codon start: 1
transl except: (pos:3696,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 1
translation: MHLLNILTLLVPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFIKEPLRPLATSTSLFIIAPTLSLTLAFSLWIPMPMPHPLINLNLGAMFILATSSLSVYSILWSGWASNSKYSMFGALRAVAQTISYEVTMAIILLSVLLMNGSFSLQSLMFTQEALWLIIPTWPLGMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALSTIVFLGPFNDPNYPEMFTTNFMMKTLALTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISVPIFMASIPPYT
SIO_010081: EI127_mgp13
subclass of: SO_0000673
so part of: EI127_mgp13
location: 2742..3696
location: region:2742-3696:1
so has part: feature:2742-3696:1:exon

YP_009538416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2742-3696:1:exon

EI127_mgt04
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: trnI
locus tag: EI127_mgt04
so part of: sequence
location: 3697..3765
location: region:3697-3765:1
so has part: feature:3697-3765:1:exon
subclass of: SO_0000663

39105340
type: Gene
SIO_000068: ncbigene

position:3697:1
position: 3697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3765:1
position: 3765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3697-3765:1:exon

EI127_mgt04
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 230844
gene: trnI
locus tag: EI127_mgt04
product: tRNA-Ile
SIO_010081: EI127_mgt04
subclass of: SO_0000673
so part of: EI127_mgt04
location: 3697..3765
location: region:3697-3765:1
so has part: feature:3697-3765:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3697-3765:1:exon

EI127_mgt05
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: trnQ
locus tag: EI127_mgt05
so part of: sequence
location: complement(3763..3833)
location: region:3763-3833:-1
so has part: feature:3763-3833:-1:exon
subclass of: SO_0000663

39105354
type: Gene
SIO_000068: ncbigene

position:3763:-1
position: 3763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3833:-1
position: 3833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3763-3833:-1:exon

EI127_mgt05
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 230844
gene: trnQ
locus tag: EI127_mgt05
product: tRNA-Gln
SIO_010081: EI127_mgt05
subclass of: SO_0000673
so part of: EI127_mgt05
location: complement(3763..3833)
location: region:3763-3833:-1
so has part: feature:3763-3833:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3763-3833:-1:exon

EI127_mgt06
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: trnM
locus tag: EI127_mgt06
so part of: sequence
location: 3838..3906
location: region:3838-3906:1
so has part: feature:3838-3906:1:exon
subclass of: SO_0000663

39105335
type: Gene
SIO_000068: ncbigene

position:3838:1
position: 3838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3906:1
position: 3906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3838-3906:1:exon

EI127_mgt06
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 230844
gene: trnM
locus tag: EI127_mgt06
product: tRNA-Met
SIO_010081: EI127_mgt06
subclass of: SO_0000673
so part of: EI127_mgt06
location: 3838..3906
location: region:3838-3906:1
so has part: feature:3838-3906:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3838-3906:1:exon

EI127_mgp12
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: ND2
locus tag: EI127_mgp12
so part of: sequence
location: 3907..4943
location: region:3907-4943:1
so has part: feature:3907-4943:1:exon
subclass of: SO_0000010

39105351
type: Gene
SIO_000068: ncbigene

position:3907:1
position: 3907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4943:1
position: 4943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3907-4943:1:exon

EI127_mgp12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 230844
gene: ND2
locus tag: EI127_mgp12
note: similar to INSD accession ASN66850 of P. polionotus; TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:4942..4943,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MNPITLLIIYFTILSGPMVTMLSANLFLMWIGLEMNLLAIIPMMTKNTNPRSTEAATKYFLTQATASMIFLLSIILNYKQLGVWTLQPQTNNQITTLMFISLAIKMGLAPFHAWLPEVTQGIPMQTGMILLTWQKMAPMSILFQMYEMTNPMILMTSAILSVLIGAWNGLNQTQTRKIMAYSSISHMGWMIAVLPFNPSLTMLNLLIYISLTVPTFIMLKHNSSNNINSLSLMWSKTPMMLPTISLILLSTGGLPPLTGFLPKWAIISELLKNNNIMLATLMAMTALINLFFYTRLIYSTTLTTFPTNNNSKMSLHHTNHKNNFILPSMAILSTMTLPLSPLLMT
SIO_010081: EI127_mgp12
subclass of: SO_0000673
so part of: EI127_mgp12
location: 3907..4943
location: region:3907-4943:1
so has part: feature:3907-4943:1:exon

YP_009538417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3907-4943:1:exon

EI127_mgt07
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: trnW
locus tag: EI127_mgt07
so part of: sequence
location: 4944..5009
location: region:4944-5009:1
so has part: feature:4944-5009:1:exon
subclass of: SO_0000663

39105362
type: Gene
SIO_000068: ncbigene

position:4944:1
position: 4944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5009:1
position: 5009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4944-5009:1:exon

EI127_mgt07
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 230844
gene: trnW
locus tag: EI127_mgt07
product: tRNA-Trp
SIO_010081: EI127_mgt07
subclass of: SO_0000673
so part of: EI127_mgt07
location: 4944..5009
location: region:4944-5009:1
so has part: feature:4944-5009:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4944-5009:1:exon

EI127_mgt08
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: trnA
locus tag: EI127_mgt08
so part of: sequence
location: complement(5011..5079)
location: region:5011-5079:-1
so has part: feature:5011-5079:-1:exon
subclass of: SO_0000663

39105333
type: Gene
SIO_000068: ncbigene

position:5011:-1
position: 5011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5079:-1
position: 5079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5011-5079:-1:exon

EI127_mgt08
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 230844
gene: trnA
locus tag: EI127_mgt08
product: tRNA-Ala
SIO_010081: EI127_mgt08
subclass of: SO_0000673
so part of: EI127_mgt08
location: complement(5011..5079)
location: region:5011-5079:-1
so has part: feature:5011-5079:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5011-5079:-1:exon

EI127_mgt09
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: trnN
locus tag: EI127_mgt09
so part of: sequence
location: complement(5082..5151)
location: region:5082-5151:-1
so has part: feature:5082-5151:-1:exon
subclass of: SO_0000663

39105343
type: Gene
SIO_000068: ncbigene

position:5082:-1
position: 5082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5151:-1
position: 5151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5082-5151:-1:exon

EI127_mgt09
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 230844
gene: trnN
locus tag: EI127_mgt09
product: tRNA-Asn
SIO_010081: EI127_mgt09
subclass of: SO_0000673
so part of: EI127_mgt09
location: complement(5082..5151)
location: region:5082-5151:-1
so has part: feature:5082-5151:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5082-5151:-1:exon

EI127_mgt10
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: trnC
locus tag: EI127_mgt10
so part of: sequence
location: complement(5183..5250)
location: region:5183-5250:-1
so has part: feature:5183-5250:-1:exon
subclass of: SO_0000663

39105345
type: Gene
SIO_000068: ncbigene

position:5183:-1
position: 5183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5250:-1
position: 5250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5183-5250:-1:exon

EI127_mgt10
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 230844
gene: trnC
locus tag: EI127_mgt10
product: tRNA-Cys
SIO_010081: EI127_mgt10
subclass of: SO_0000673
so part of: EI127_mgt10
location: complement(5183..5250)
location: region:5183-5250:-1
so has part: feature:5183-5250:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5183-5250:-1:exon

EI127_mgt11
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: trnY
locus tag: EI127_mgt11
so part of: sequence
location: complement(5251..5318)
location: region:5251-5318:-1
so has part: feature:5251-5318:-1:exon
subclass of: SO_0000663

39105365
type: Gene
SIO_000068: ncbigene

position:5251:-1
position: 5251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5318:-1
position: 5318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5251-5318:-1:exon

EI127_mgt11
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 230844
gene: trnY
locus tag: EI127_mgt11
product: tRNA-Tyr
SIO_010081: EI127_mgt11
subclass of: SO_0000673
so part of: EI127_mgt11
location: complement(5251..5318)
location: region:5251-5318:-1
so has part: feature:5251-5318:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5251-5318:-1:exon

EI127_mgp11
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: COX1
locus tag: EI127_mgp11
so part of: sequence
location: 5320..6864
location: region:5320-6864:1
so has part: feature:5320-6864:1:exon
subclass of: SO_0000010

39105350
type: Gene
SIO_000068: ncbigene

position:5320:1
position: 5320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6864:1
position: 6864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5320-6864:1:exon

EI127_mgp11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 230844
gene: COX1
locus tag: EI127_mgp11
note: similar to INSD accession ASN66851 of P. polionotus
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTINDTWAKTHFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLVMIFMIWEAFASKREVLSVEYSSTNLEWLHGCPPPYHTFEEPTYVKVK
SIO_010081: EI127_mgp11
subclass of: SO_0000673
so part of: EI127_mgp11
location: 5320..6864
location: region:5320-6864:1
so has part: feature:5320-6864:1:exon

YP_009538418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5320-6864:1:exon

EI127_mgt12
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: trnS1
locus tag: EI127_mgt12
so part of: sequence
location: complement(6862..6930)
location: region:6862-6930:-1
so has part: feature:6862-6930:-1:exon
subclass of: SO_0000663

39105341
type: Gene
SIO_000068: ncbigene

position:6862:-1
position: 6862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6930:-1
position: 6930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6862-6930:-1:exon

EI127_mgt12
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 230844
gene: trnS1
locus tag: EI127_mgt12
product: tRNA-Ser
SIO_010081: EI127_mgt12
subclass of: SO_0000673
so part of: EI127_mgt12
location: complement(6862..6930)
location: region:6862-6930:-1
so has part: feature:6862-6930:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6862-6930:-1:exon

EI127_mgt13
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: trnD
locus tag: EI127_mgt13
so part of: sequence
location: 6934..7001
location: region:6934-7001:1
so has part: feature:6934-7001:1:exon
subclass of: SO_0000663

39105352
type: Gene
SIO_000068: ncbigene

position:6934:1
position: 6934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7001:1
position: 7001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6934-7001:1:exon

EI127_mgt13
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 230844
gene: trnD
locus tag: EI127_mgt13
product: tRNA-Asp
SIO_010081: EI127_mgt13
subclass of: SO_0000673
so part of: EI127_mgt13
location: 6934..7001
location: region:6934-7001:1
so has part: feature:6934-7001:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6934-7001:1:exon

EI127_mgp10
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: COX2
locus tag: EI127_mgp10
so part of: sequence
location: 7003..7686
location: region:7003-7686:1
so has part: feature:7003-7686:1:exon
subclass of: SO_0000010

39105364
type: Gene
SIO_000068: ncbigene

position:7003:1
position: 7003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7686:1
position: 7686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7003-7686:1:exon

EI127_mgp10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 230844
gene: COX2
locus tag: EI127_mgp10
note: similar to INSD accession AEK94174 and AVC52699 of P. leucopus
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit II
translation: MAYPFQLGLQDATSPIMEELTNFHDHTLMIVFLISSLVLYIITLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATISSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSSSMI
SIO_010081: EI127_mgp10
subclass of: SO_0000673
so part of: EI127_mgp10
location: 7003..7686
location: region:7003-7686:1
so has part: feature:7003-7686:1:exon

YP_009538419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7003-7686:1:exon

EI127_mgt14
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: trnK
locus tag: EI127_mgt14
so part of: sequence
location: 7690..7754
location: region:7690-7754:1
so has part: feature:7690-7754:1:exon
subclass of: SO_0000663

39105339
type: Gene
SIO_000068: ncbigene

position:7690:1
position: 7690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7754:1
position: 7754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7690-7754:1:exon

EI127_mgt14
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 230844
gene: trnK
locus tag: EI127_mgt14
product: tRNA-Lys
SIO_010081: EI127_mgt14
subclass of: SO_0000673
so part of: EI127_mgt14
location: 7690..7754
location: region:7690-7754:1
so has part: feature:7690-7754:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7690-7754:1:exon

EI127_mgp09
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: ATP8
locus tag: EI127_mgp09
so part of: sequence
location: 7756..7959
location: region:7756-7959:1
so has part: feature:7756-7959:1:exon
subclass of: SO_0000010

39105361
type: Gene
SIO_000068: ncbigene

position:7756:1
position: 7756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7959:1
position: 7959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7756-7959:1:exon

EI127_mgp09
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 230844
gene: ATP8
locus tag: EI127_mgp09
note: similar to INSD accession AVC527726 of RML strain of P. leucopus
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLDTSTWFITILSAIITLFVLMQLKISTINFPLSPSIKSTEMVKTDNPWETKWTKIYSPLSLLPQ
SIO_010081: EI127_mgp09
subclass of: SO_0000673
so part of: EI127_mgp09
location: 7756..7959
location: region:7756-7959:1
so has part: feature:7756-7959:1:exon

YP_009538420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7756-7959:1:exon

EI127_mgp08
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: ATP6
locus tag: EI127_mgp08
so part of: sequence
location: 7917..8597
location: region:7917-8597:1
so has part: feature:7917-8597:1:exon
subclass of: SO_0000010

39105332
type: Gene
SIO_000068: ncbigene

position:7917:1
position: 7917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8597:1
position: 8597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7917-8597:1:exon

EI127_mgp08
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 230844
gene: ATP6
locus tag: EI127_mgp08
note: similar to INSD accession ASN66854 of P. polionotus
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 6
translation: MNENLFASFITPTMMGLPIVVFIIMLPSMLLSSSKRLVTNRYFSFLYWLVKLITKQMMLIHTPKGRTWSLMLVSLMMFIGSTNLLGLLPHTFTPTTQLSMNLGMAIPLWAGAVILGFRHKLKSSLAHFLPQGTPISLIPMLIIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLVLTSISPPTASITFIILALLTILEFAVALIQAYVFTLLVSLYLHDNT
SIO_010081: EI127_mgp08
subclass of: SO_0000673
so part of: EI127_mgp08
location: 7917..8597
location: region:7917-8597:1
so has part: feature:7917-8597:1:exon

YP_009538421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7917-8597:1:exon

EI127_mgp07
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: COX3
locus tag: EI127_mgp07
so part of: sequence
location: 8597..9380
location: region:8597-9380:1
so has part: feature:8597-9380:1:exon
subclass of: SO_0000010

39105355
type: Gene
SIO_000068: ncbigene

position:9380:1
position: 9380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8597-9380:1:exon

EI127_mgp07
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 230844
gene: COX3
locus tag: EI127_mgp07
note: similar to INSD ASN66855 of Peromyscus polionotus; TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9380,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit III
translation: MTHQTHAYHMVNPSPWPLTGAFSALLLTSGLVMWFHYNSYTLMTIGLLANILTMYQWWRDIVREGTYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTHDLGGCWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNNMNQALIITILLGIYFTILQASEYFETPFSISDGIYGSTFFMATGFHGLHVIIGTTFLMVCLLRQLKYHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS
SIO_010081: EI127_mgp07
subclass of: SO_0000673
so part of: EI127_mgp07
location: 8597..9380
location: region:8597-9380:1
so has part: feature:8597-9380:1:exon

YP_009538422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8597-9380:1:exon

EI127_mgt15
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: trnG
locus tag: EI127_mgt15
so part of: sequence
location: 9381..9449
location: region:9381-9449:1
so has part: feature:9381-9449:1:exon
subclass of: SO_0000663

39105358
type: Gene
SIO_000068: ncbigene

position:9381:1
position: 9381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9449:1
position: 9449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9381-9449:1:exon

EI127_mgt15
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 230844
gene: trnG
locus tag: EI127_mgt15
product: tRNA-Gly
SIO_010081: EI127_mgt15
subclass of: SO_0000673
so part of: EI127_mgt15
location: 9381..9449
location: region:9381-9449:1
so has part: feature:9381-9449:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9381-9449:1:exon

EI127_mgp06
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: ND3
locus tag: EI127_mgp06
so part of: sequence
location: 9450..9797
location: region:9450-9797:1
so has part: feature:9450-9797:1:exon
subclass of: SO_0000010

39105344
type: Gene
SIO_000068: ncbigene

position:9450:1
position: 9450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9797:1
position: 9797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9450-9797:1:exon

EI127_mgp06
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 230844
gene: ND3
locus tag: EI127_mgp06
note: similar to INSD accession ASN66856 of P. polionotus
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MNMLTALLVNITLSILLITIAFWLPQLNLYTEKANPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQMYNINIMMLTAFILVSVLALGLAYEWLQKGLEWTE
SIO_010081: EI127_mgp06
subclass of: SO_0000673
so part of: EI127_mgp06
location: 9450..9797
location: region:9450-9797:1
so has part: feature:9450-9797:1:exon

YP_009538423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9450-9797:1:exon

EI127_mgt16
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: trnR
locus tag: EI127_mgt16
so part of: sequence
location: 9799..9866
location: region:9799-9866:1
so has part: feature:9799-9866:1:exon
subclass of: SO_0000663

39105348
type: Gene
SIO_000068: ncbigene

position:9799:1
position: 9799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9866:1
position: 9866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9799-9866:1:exon

EI127_mgt16
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 230844
gene: trnR
locus tag: EI127_mgt16
product: tRNA-Arg
SIO_010081: EI127_mgt16
subclass of: SO_0000673
so part of: EI127_mgt16
location: 9799..9866
location: region:9799-9866:1
so has part: feature:9799-9866:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9799-9866:1:exon

EI127_mgp05
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: ND4L
locus tag: EI127_mgp05
so part of: sequence
location: 9869..10165
location: region:9869-10165:1
so has part: feature:9869-10165:1:exon
subclass of: SO_0000010

39105356
type: Gene
SIO_000068: ncbigene

position:9869:1
position: 9869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10165:1
position: 10165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9869-10165:1:exon

EI127_mgp05
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 230844
gene: ND4L
locus tag: EI127_mgp05
note: similar to accession AVC52704 of P. leucopus
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MSSVTSNIMLAFSFSFLGTLVFRSHLMSTLLCLEGMMLSLFIMTTITSLNSHSMIMYPLPIVILVFAACEAAIGLALLAKVSNSYGTDYVQNLNLLQC
SIO_010081: EI127_mgp05
subclass of: SO_0000673
so part of: EI127_mgp05
location: 9869..10165
location: region:9869-10165:1
so has part: feature:9869-10165:1:exon

YP_009538424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9869-10165:1:exon

EI127_mgp04
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: ND4
locus tag: EI127_mgp04
so part of: sequence
location: 10159..11536
location: region:10159-11536:1
so has part: feature:10159-11536:1:exon
subclass of: SO_0000010

39105337
type: Gene
SIO_000068: ncbigene

position:10159:1
position: 10159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11536:1
position: 11536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10159-11536:1:exon

EI127_mgp04
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 230844
gene: ND4
locus tag: EI127_mgp04
note: similar to INSD accession ASN66858 of P. polionotus; TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:11536,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLKIIFPSIMLLPLTWLSNKKNLWINVTSYSFMISLTSAMFLWQNDMNNLNFSLLFSTDSLSSPLIILTTWLLPLMLLASQNHMKKETELNKKTYISMLVLLQILLIMTFSANELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSIPLLIALIHIQNMKGTLNFMLFPLTFTPLDQTWSNNILWLACMMAFMIKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRIAMILDPVTKTMAYPFILLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIAAIMIQTPWSFMGATTLMIAHGLTSSLLFCLANTNYERIHSRTMIMTRGLQTIFPLMTTLWVLASLANLALPPSINLIGELLITVSLFSWSYPTILLLGGNILITSLYSMYMIITTQRGKLTSHMINLQPSHTREFTLMMLHITPLILLTINPKLIMGPTM
SIO_010081: EI127_mgp04
subclass of: SO_0000673
so part of: EI127_mgp04
location: 10159..11536
location: region:10159-11536:1
so has part: feature:10159-11536:1:exon

YP_009538425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10159-11536:1:exon

EI127_mgt17
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: trnH
locus tag: EI127_mgt17
so part of: sequence
location: 11537..11605
location: region:11537-11605:1
so has part: feature:11537-11605:1:exon
subclass of: SO_0000663

39105347
type: Gene
SIO_000068: ncbigene

position:11537:1
position: 11537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11605:1
position: 11605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11537-11605:1:exon

EI127_mgt17
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 230844
gene: trnH
locus tag: EI127_mgt17
product: tRNA-His
SIO_010081: EI127_mgt17
subclass of: SO_0000673
so part of: EI127_mgt17
location: 11537..11605
location: region:11537-11605:1
so has part: feature:11537-11605:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11537-11605:1:exon

EI127_mgt18
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: trnS2
locus tag: EI127_mgt18
so part of: sequence
location: 11606..11664
location: region:11606-11664:1
so has part: feature:11606-11664:1:exon
subclass of: SO_0000663

39105357
type: Gene
SIO_000068: ncbigene

position:11606:1
position: 11606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11664:1
position: 11664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11606-11664:1:exon

EI127_mgt18
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 230844
gene: trnS2
locus tag: EI127_mgt18
product: tRNA-Ser
SIO_010081: EI127_mgt18
subclass of: SO_0000673
so part of: EI127_mgt18
location: 11606..11664
location: region:11606-11664:1
so has part: feature:11606-11664:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11606-11664:1:exon

EI127_mgt19
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: trnL2
locus tag: EI127_mgt19
so part of: sequence
location: 11664..11733
location: region:11664-11733:1
so has part: feature:11664-11733:1:exon
subclass of: SO_0000663

39105363
type: Gene
SIO_000068: ncbigene

position:11733:1
position: 11733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11664-11733:1:exon

EI127_mgt19
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 230844
gene: trnL2
locus tag: EI127_mgt19
product: tRNA-Leu
SIO_010081: EI127_mgt19
subclass of: SO_0000673
so part of: EI127_mgt19
location: 11664..11733
location: region:11664-11733:1
so has part: feature:11664-11733:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11664-11733:1:exon

EI127_mgp03
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: ND5
locus tag: EI127_mgp03
so part of: sequence
location: 11734..13548
location: region:11734-13548:1
so has part: feature:11734-13548:1:exon
subclass of: SO_0000010

39105353
type: Gene
SIO_000068: ncbigene

position:11734:1
position: 11734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13548:1
position: 13548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11734-13548:1:exon

EI127_mgp03
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 230844
gene: ND5
locus tag: EI127_mgp03
note: similar to INSD accession ASN66859 of P. polionotus
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 5
translation: MNTITSSILLIFFLLTFPIMLSMTNLIKSINFPNYVTLSIKYAFLLSLVPLTTFFSSNTDMLITNWHWMTINTMKLSVSLKFDFFCIIFLSVALFVTWSIMEFSSWYMHSDPHLNRFIKYLLMFLITMIILTSANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILTMAWFCLHSNSWELQQIFMTNDPTNIAPLMGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLMVRFHPITSNNNLILTMMLCLGSITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGNLTKPMPFTSSCLMIGSLALTGMPFLTGFYSKDLIIEAANTCYTNAWALLITLIATSLTAVYSMRIIYFVSMTKPRFPPMIIINENNPKLMNPIKRLALGSILAGFFISQNIPPTTTQIMTMPWYLKTTAMIVTISGFIIALELNNLTSNLVMNKPTPSSSFSTSLGYYPLIMHRLLPLKMLTKSFNTSLQLLDLVWLEKTIPNTTSTLQTTASKNLANQKGLIKLYFLSFLITFLSIPILFIT
SIO_010081: EI127_mgp03
subclass of: SO_0000673
so part of: EI127_mgp03
location: 11734..13548
location: region:11734-13548:1
so has part: feature:11734-13548:1:exon

YP_009538426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11734-13548:1:exon

EI127_mgp02
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: ND6
locus tag: EI127_mgp02
so part of: sequence
location: complement(13545..14072)
location: region:13545-14072:-1
so has part: feature:13545-14072:-1:exon
subclass of: SO_0000010

39105346
type: Gene
SIO_000068: ncbigene

position:13545:-1
position: 13545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14072:-1
position: 14072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13545-14072:-1:exon

EI127_mgp02
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 230844
gene: ND6
locus tag: EI127_mgp02
note: similar to INSD accession ASN66860 of P. polionotus
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MTEYIFILSSFIALGCLGVSLKPSPIYGGMCLIVSGCSGCLAVLGFGGSFLGAMVFLIYLGGMLVVFGYTTAMSTEEFPETLMSSWSVFGALMTGIFMEMGVVYASNEYNLVNSVLVHNSNTGGWVVYDSDELGLMGEGGAGVAALYSCSAWLMVVSGWTLLMGVMVIIEIVRIN
SIO_010081: EI127_mgp02
subclass of: SO_0000673
so part of: EI127_mgp02
location: complement(13545..14072)
location: region:13545-14072:-1
so has part: feature:13545-14072:-1:exon

YP_009538427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13545-14072:-1:exon

EI127_mgt20
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: trnE
locus tag: EI127_mgt20
so part of: sequence
location: complement(14073..14141)
location: region:14073-14141:-1
so has part: feature:14073-14141:-1:exon
subclass of: SO_0000663

39105336
type: Gene
SIO_000068: ncbigene

position:14073:-1
position: 14073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14141:-1
position: 14141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14073-14141:-1:exon

EI127_mgt20
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 230844
gene: trnE
locus tag: EI127_mgt20
product: tRNA-Glu
SIO_010081: EI127_mgt20
subclass of: SO_0000673
so part of: EI127_mgt20
location: complement(14073..14141)
location: region:14073-14141:-1
so has part: feature:14073-14141:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14073-14141:-1:exon

EI127_mgp01
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: CYTB
locus tag: EI127_mgp01
so part of: sequence
location: 14147..15290
location: region:14147-15290:1
so has part: feature:14147-15290:1:exon
subclass of: SO_0000010

39105360
type: Gene
SIO_000068: ncbigene

position:14147:1
position: 14147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15290:1
position: 15290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14147-15290:1:exon

EI127_mgp01
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 230844
gene: CYTB
locus tag: EI127_mgp01
note: similar to INSD accession ASN66861 of P. polionotus; TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:15290,aa:TERM)
transl table: 2
product: cytochrome b
translation: MTNIRKKHPLIKIINESFIDLPAPSNISSWWNFGSLLGVCLMIQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGMYYGSYTFMETWNIGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVVVHLLFLHETGSNNPSGLNSDADKIPFHPYYTIKDILGILLLLMVLMILVLFFPDILGDPDNYTPANPLNTPAHIKPEWYFLFAYAILRSIPNKLGGVMALVLSILILALLPLLQTSKQRGLMFRPISQTLFWILVANLFILTWIGGQPVEHPFVMIGQLASISYFTIIIILMPVAGMIENNMLKFTH
SIO_010081: EI127_mgp01
subclass of: SO_0000673
so part of: EI127_mgp01
location: 14147..15290
location: region:14147-15290:1
so has part: feature:14147-15290:1:exon

YP_009538428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14147-15290:1:exon

EI127_mgt21
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: trnT
locus tag: EI127_mgt21
so part of: sequence
location: 15291..15358
location: region:15291-15358:1
so has part: feature:15291-15358:1:exon
subclass of: SO_0000663

39105330
type: Gene
SIO_000068: ncbigene

position:15291:1
position: 15291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15358:1
position: 15358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15291-15358:1:exon

EI127_mgt21
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 230844
gene: trnT
locus tag: EI127_mgt21
product: tRNA-Thr
SIO_010081: EI127_mgt21
subclass of: SO_0000673
so part of: EI127_mgt21
location: 15291..15358
location: region:15291-15358:1
so has part: feature:15291-15358:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15291-15358:1:exon

EI127_mgt22
type: Gene
subclass of: SO_0000704
RO_0002162: 230844
gene: trnP
locus tag: EI127_mgt22
so part of: sequence
location: complement(15359..15425)
location: region:15359-15425:-1
so has part: feature:15359-15425:-1:exon
subclass of: SO_0000663

39105366
type: Gene
SIO_000068: ncbigene

position:15359:-1
position: 15359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15425:-1
position: 15425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15359-15425:-1:exon

EI127_mgt22
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 230844
gene: trnP
locus tag: EI127_mgt22
product: tRNA-Pro
SIO_010081: EI127_mgt22
subclass of: SO_0000673
so part of: EI127_mgt22
location: complement(15359..15425)
location: region:15359-15425:-1
so has part: feature:15359-15425:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15359-15425:-1:exon

D-loop
type: Displacement Loop
subclass of: SO_0000297
RO_0002162: 230844
so part of: sequence
location: 15426..16322
location: region:15426-16322:1
so has part: feature:15426-16322:1:region

position:15426:1
position: 15426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15426-16322:1:region