Levilactobacillus suantsaii strain CBA3634 plasmid pCBA3634-03, complete sequence.
type: Entry
definition: Levilactobacillus suantsaii strain CBA3634 plasmid pCBA3634-03, complete sequence.
sequence version: NZ_CP059606.1
sequence date: 2022-12-08
sequence: sequence
division: CON
label: NZ_CP059606.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN15659520
keyword: RefSeq
source: Levilactobacillus suantsaii
organism: Levilactobacillus suantsaii
taxonomy: Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Levilactobacillus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP059606.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: DEC-2019\nAssembly Method :: HGAP v. 3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 273.0x\nSequencing Technology :: PacBio RSII; Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/08/2022 06:34:17\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,568\nCDSs (total) :: 2,477\nGenes (coding) :: 2,405\nCDSs (with protein) :: 2,405\nGenes (RNA) :: 91\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 70\nncRNAs :: 3\nPseudo Genes (total) :: 72\nCDSs (without protein) :: 72\nPseudo Genes (ambiguous residues) :: 0 of 72\nPseudo Genes (frameshifted) :: 36 of 72\nPseudo Genes (incomplete) :: 21 of 72\nPseudo Genes (internal stop) :: 23 of 72\nPseudo Genes (multiple problems) :: 8 of 72\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 37690
topology: circular
so has quality: SO_0000988
location: 1..37690
location: region:1-37690:1
RO_0002162: 2292255

NZ_CP059606
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN15659520
type: BioSample
SIO_000068: biosample

1
title: Culture-independent analysis of the bacterial communities in Chinese fermented vegetables and genomic analysis of lactic acid bacteria
author: Roh, S.W.
author: Song, H.S.
journal: Unpublished

2
title: Direct Submission
author: Roh, S.W.
author: Song, H.S.
journal: Submitted (28-JUL-2020) Microbiology and Functionality Research Group, World Institute of Kimchi, 86, Kimchi-ro, Nam-gu, Gwangju, Gwangju 61755, South Korea

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37690:1
position: 37690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-37690:1:source
so part of: sequence
organism: Levilactobacillus suantsaii
mol type: genomic DNA
strain: CBA3634
plasmid: pCBA3634-03
country: South Korea
collection date: 2019-07

2292255
type: Taxonomy
SIO_000068: taxonomy

H3M12_RS12445
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12445
old locus tag: H3M12_12445
so part of: sequence
location: complement(join(37341..37690,1..571))
location: region:1-37690:-1
so has part: feature:1-571:-1:exon
so has part: feature:37341-37690:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37690:-1
position: 37690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-571:-1:exon

position:571:-1
position: 571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:37341-37690:-1:exon

position:37341:-1
position: 37341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

H3M12_RS12445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12445
old locus tag: H3M12_12445
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011373852.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30-like element ISLsa1 family transposase
translation: MGTSTLSRFQRGALAQLVNEGNKSYQVMADALGVAKATISYELDRVKPYDPELAQQDADRKRRNCGRRSMLTAALVTLITNHLRLTWSPETIAAAYNLSTASIYNWLNRGWLPFKLTDLPNRNVRQHRVSENRGKFTSGTSIEQRPTTVTQRLAFGHWEVDTVLSSRSESRSCLVTFVERKTRLLWAIKAPNRTAKALNTAFGKFMGAFGPQVKSITVDHGKEFANYQALEQDYQIKVYFCHPYSPWERGSNEYFNRRLRWFFPKKTNFSQVTTDEILAALELINQRPLKIHHQQTAIERFRACSD
SIO_010081: H3M12_RS12445
subclass of: SO_0000673
so part of: H3M12_RS12445
location: complement(join(37341..37690,1..571))
location: region:1-37690:-1
so has part: feature:1-571:-1:exon
so has part: feature:37341-37690:-1:exon

WP_182151147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-571:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:37341-37690:-1:exon

H3M12_RS12450
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12450
old locus tag: H3M12_12450
so part of: sequence
location: 978..1040
location: region:978-1040:1
so has part: feature:978-1040:1:exon
subclass of: SO_0000010

position:978:1
position: 978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040:1
position: 1040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:978-1040:1:exon

H3M12_RS12450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12450
old locus tag: H3M12_12450
inference: COORDINATES: protein motif:HMM:NF028245.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative holin-like toxin
translation: MLLFGTFLIALLSYIDKHHK
SIO_010081: H3M12_RS12450
subclass of: SO_0000673
so part of: H3M12_RS12450
location: 978..1040
location: region:978-1040:1
so has part: feature:978-1040:1:exon

WP_222843308.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:978-1040:1:exon

H3M12_RS12455
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12455
old locus tag: H3M12_12455
so part of: sequence
location: complement(1377..2945)
location: region:1377-2945:-1
so has part: feature:1377-2945:-1:exon
subclass of: SO_0000010

position:1377:-1
position: 1377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2945:-1
position: 2945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1377-2945:-1:exon

H3M12_RS12455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12455
old locus tag: H3M12_12455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016526665.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0005247 - voltage-gated chloride channel activity [Evidence IEA]
GO process: GO:0006821 - chloride transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ClC family H(+)/Cl(-) exchange transporter
translation: MIQLVKEKFDVTRLRFVLLGLLVGLMSGTVVSLFRYCIEIGLHYSRLVYRYLRIAPFVWWEWALLIGINLGLALIVARLLKREPYIAGSGIPQVEGQLAGELEMHWWSILWRKFIGGILALGPGLFLGREGPAIQLSASVGQGFASEFKLSGTDRRLLIASGAAAGLAAAFNAPIAGTLFVLEEIYHNFSPLVWLTALAGAIGSNLISLNVFGLVPVLHLSYSRSLPVSNYWHLILLGIVLGLFGYLYQRVLLVMPRWYHQLTHLPRPIQGIVPFLLVILVGYFSTNLLGGGNGLILGFGQHVPPLFVLIAIFIIRFVFSMISYGSGLPGGIFLPILSLGAVIGAVYGVLMNQLGLLSHVYIMNLIIFSMAGYFAGIGKAPFTAILLVTEMVGNLTHLMPLAVISLTAYLVVDLLGGAPIYEALLKQMTMPKTVQQLHRPDYLEIPVFFGSPLNGKMVRDMPWPKEALLIGIRRGEQEVIPHGDTLIHEGDTLVLLTDTTQRPQVKQRIDALLATLEKKHQD
SIO_010081: H3M12_RS12455
subclass of: SO_0000673
so part of: H3M12_RS12455
location: complement(1377..2945)
location: region:1377-2945:-1
so has part: feature:1377-2945:-1:exon

WP_182151148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1377-2945:-1:exon

H3M12_RS12460
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12460
old locus tag: H3M12_12460
so part of: sequence
location: complement(3068..4222)
location: region:3068-4222:-1
so has part: feature:3068-4222:-1:exon
subclass of: SO_0000010

position:3068:-1
position: 3068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4222:-1
position: 4222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3068-4222:-1:exon

H3M12_RS12460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12460
old locus tag: H3M12_12460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013356282.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation:proton antiporter
translation: MEFLGTLVIILIATSLFGHLASRVGIPAVIGQLFVGIILGPALLNWVHANDFIHIFSEIGVIILMFIAGLESDLTLLKKYLRPSIIVALLGVLIPMVLIYPVGIVFGLTQFESLFLSVIFAATSVSISVAVMKELNLLDSKSGSTVLGAAVVDDVLAVVLLSIMVSLIGTKAGTDTQIPLALTFLEQLIYFAAIYFVMRFIAPLLARLGTKLLNPVGPTIMAMILCFGMAYIANLIGLSAVIGAFFAGIAIAQTHVAHEVDQSIEPIGYAIFIPVFFVSIGLSMSLAGIEHDLLLIIVLTIVATLTKLLGAGSGAKWAGFSSNEAYLVGAGMVSRGEMALIIAQIGYQSKLISDDYYSAIITAIILTTLLAPLLLKHAARHINY
SIO_010081: H3M12_RS12460
subclass of: SO_0000673
so part of: H3M12_RS12460
location: complement(3068..4222)
location: region:3068-4222:-1
so has part: feature:3068-4222:-1:exon

WP_013356282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3068-4222:-1:exon

H3M12_RS12465
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12465
old locus tag: H3M12_12465
so part of: sequence
location: 4600..5529
location: region:4600-5529:1
so has part: feature:4600-5529:1:exon
subclass of: SO_0000010

position:4600:1
position: 4600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5529:1
position: 5529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4600-5529:1:exon

H3M12_RS12465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12465
old locus tag: H3M12_12465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_053338758.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30-like element ISLpl1 family transposase
translation: MSSITYSERIKIETFCELGLSNIQMGVRLNRSPSTISYELSRCQPYQAELAQTDAEYKRSRCGRKTKLSDELKQTILNHLRLSWSPGMIAHEFKLATKSIYNWLNQGRIGFSLNDLPEHGVRQRRNVDQRSKYNQSLGRSIEQRPMMINQRNRIGDFELDTVVGPRGHSKAVLLTLIDRKSRFLWAYRLKDRTTASVNEALTKFLTTFNGPVHSFTVDRGTEFSGLVSFESQYGIKTYYCHAYTPAERGSNERFNRNLRYFYPKGTRFEHISAQDLTTTLLQINQRPLKILDWKTPYQVMLTNLSKNSD
SIO_010081: H3M12_RS12465
subclass of: SO_0000673
so part of: H3M12_RS12465
location: 4600..5529
location: region:4600-5529:1
so has part: feature:4600-5529:1:exon

WP_110140130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4600-5529:1:exon

H3M12_RS12475
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12475
old locus tag: H3M12_12475
so part of: sequence
location: complement(5823..6065)
location: region:5823-6065:-1
so has part: feature:5823-6065:-1:exon
subclass of: SO_0000010

position:5823:-1
position: 5823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6065:-1
position: 6065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5823-6065:-1:exon

H3M12_RS12475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12475
old locus tag: H3M12_12475
inference: COORDINATES: protein motif:HMM:NF024094.2
GO function: GO:0010181 - FMN binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flavodoxin
translation: MKITKHELDERTFPKIMPITADIAGSNHIILAFPNWWNHLPRPIVTFMEQYQWQDKTIYPVCTHEGNRFGDSLNELSEIA
SIO_010081: H3M12_RS12475
subclass of: SO_0000673
so part of: H3M12_RS12475
location: complement(5823..6065)
location: region:5823-6065:-1
so has part: feature:5823-6065:-1:exon

WP_015474657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5823-6065:-1:exon

H3M12_RS12480
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12480
old locus tag: H3M12_12480
pseudo: true
so part of: sequence
location: 6192..7126
location: region:6192-7126:1
so has part: feature:6192-7126:1:exon
subclass of: SO_0000010

position:6192:1
position: 6192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7126:1
position: 7126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6192-7126:1:exon

H3M12_RS12480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12480
old locus tag: H3M12_12480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_053338758.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS30 family transposase
SIO_010081: H3M12_RS12480
subclass of: SO_0000673
so part of: H3M12_RS12480
location: 6192..7126
location: region:6192-7126:1
so has part: feature:6192-7126:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6192-7126:1:exon

H3M12_RS12485
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12485
old locus tag: H3M12_12485
so part of: sequence
location: 7359..9395
location: region:7359-9395:1
so has part: feature:7359-9395:1:exon
subclass of: SO_0000010

position:7359:1
position: 7359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9395:1
position: 9395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7359-9395:1:exon

H3M12_RS12485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12485
old locus tag: H3M12_12485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013356293.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015079 - potassium ion transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: KUP/HAK/KT family potassium transporter
translation: MNKQLERVSLAGALVTLGIVYGDIGTSPLYVMNALIGDAGKMENISPEYVIGSVSLIFWTLMIITTLKYVVIAMQADNKHEGGIFALYALVRKNAKWLIWPALIGGAAILADGTLTPAVTVTSAIEGLKKQHLGPVVFSNSQHNVLIITTVVLLVLFMIQRFGTGVIGKSFGPVMILWFGFLAVFGIVNLINYPMILKAISPYYAIKILFSPVNKVGIFILGSIFLATTGAEALYSDMGHVGKKNIYVTWPLVYSTLFLNYLGQGAWIIRHAGDTAYRHLSNLNPFYEMLPGPWRLVGILLATLAAIIASQALITGSYTLVDEAIGLKFLPRMVIRHPSNIKNQIYIATVNWILCIITISVVWFFGSSQKMEAAYGLAITITMLMTTVLLHEFLNKHLNKGTALIIALFFGFIELIFLISSLVKFIHGGYVTLTIMLGILYIMWLWYFGNKRREHYEKESEYVSLLDYRDQLSKLSADNTIPLFTTNLVYMTKIKGDYQIKRSTMYSILDRQPKRAKVYWFVTVNETNAPYESNYTVDLLETHNVVNVQLYLGFRKSQSVSVYLHQIVNHLVEQGILEPQIPTYSTERQRKVGDFKFVIIKEQPADLIVNDQLSSLDRRLIGGRIYLQKITASPISWYGLEFSNVIEESSPLFITQDQDQYLIQKKIYHRDILNNPKK
SIO_010081: H3M12_RS12485
subclass of: SO_0000673
so part of: H3M12_RS12485
location: 7359..9395
location: region:7359-9395:1
so has part: feature:7359-9395:1:exon

WP_141374141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7359-9395:1:exon

H3M12_RS12490
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12490
old locus tag: H3M12_12490
so part of: sequence
location: 9771..10340
location: region:9771-10340:1
so has part: feature:9771-10340:1:exon
subclass of: SO_0000010

position:9771:1
position: 9771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10340:1
position: 10340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9771-10340:1:exon

H3M12_RS12490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12490
old locus tag: H3M12_12490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011674065.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MKYGYARVSTTDQKLANQIELLKLAGAEKIFQEKFTGTTTERPEFQKLLRVLKTGDTLIVTKLDRFARNTREALAIIQELFKENVKVNILNMGLIDNTPTGQLVFTIFSAFAQFERDMIVTRTQEGKLYAKQHDPLFREGRPKTYSEEQIRFAYELRKQGMTYKMIERKTGISKRTQQRRFKLVKNNIF
SIO_010081: H3M12_RS12490
subclass of: SO_0000673
so part of: H3M12_RS12490
location: 9771..10340
location: region:9771-10340:1
so has part: feature:9771-10340:1:exon

WP_016526904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9771-10340:1:exon

H3M12_RS12495
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12495
old locus tag: H3M12_12495
so part of: sequence
location: complement(11130..11498)
location: region:11130-11498:-1
so has part: feature:11130-11498:-1:exon
subclass of: SO_0000010

position:11130:-1
position: 11130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11498:-1
position: 11498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11130-11498:-1:exon

H3M12_RS12495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12495
old locus tag: H3M12_12495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020090532.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5388 domain-containing protein
translation: MSGLLNNPNLKKQPKTDPLDRGQDIKPKNTFTTDDLKSNNGKPSKLGKSVADSVTFYANVRINNHIKNKAEALSGIGLYKSQKDAIDNALDYLIDSLDAEDKRKFTFQLDILESRDARTRGK
SIO_010081: H3M12_RS12495
subclass of: SO_0000673
so part of: H3M12_RS12495
location: complement(11130..11498)
location: region:11130-11498:-1
so has part: feature:11130-11498:-1:exon

WP_003646127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11130-11498:-1:exon

H3M12_RS12500
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12500
old locus tag: H3M12_12500
so part of: sequence
location: complement(11501..12307)
location: region:11501-12307:-1
so has part: feature:11501-12307:-1:exon
subclass of: SO_0000010

position:11501:-1
position: 11501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12307:-1
position: 12307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11501-12307:-1:exon

H3M12_RS12500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12500
old locus tag: H3M12_12500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010010558.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MDSKVITFSNFKGGTGKTTNSTMTGIELARRGYKTLLIDLDPQANATNLYLKTKNNVGDEVTSFDETLMTAIKNKNLKPAIINVIQNLDILPSSADFSLYPRYMENIISDYTDRVKYLSTLINPWKDDYDYLLVDVPPTISLITDTALYMTDYAIVVLQTQERSLQGAQAFIKYMQDQIINEFHAPTLDLLGILPVLLKNGAPVDKSTLAKAIDIFGKENIFDITIKNMERLKRYDVTGVTFKDQFDKAVQDVYSNVTDEIFSRMAGE
SIO_010081: H3M12_RS12500
subclass of: SO_0000673
so part of: H3M12_RS12500
location: complement(11501..12307)
location: region:11501-12307:-1
so has part: feature:11501-12307:-1:exon

WP_182151149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11501-12307:-1:exon

H3M12_RS12505
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12505
old locus tag: H3M12_12505
so part of: sequence
location: 13214..14137
location: region:13214-14137:1
so has part: feature:13214-14137:1:exon
subclass of: SO_0000010

position:13214:1
position: 13214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14137:1
position: 14137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13214-14137:1:exon

H3M12_RS12505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12505
old locus tag: H3M12_12505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013355080.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MGTTILSFEDRVVIETLHHEKHSLQYIADYLGFSKTTIFNEVHRLAGEYHAVKAQTDHEVKLSHRGRKTILTTNLKRLIEEKIKIQKWSIEQVAHVVRIAYKTIYNWIDQGLLDINVTDLPDHGIRRKRAKETRGTFSHGRSIEDRPAEISDRNTSGHFEADTVLSGKRKGQAVATFVERKSRLTIVKRLNGRDSTSITKAILELANQLGDNLKTLTVDHGKEFANYNLIEEQTGVPLYFAHAYSPHERGSNENRNRVLRRFIPKGQPIDEITDDELIQINWYLNSRPLKCLNWRTPIEIFLRDLRY
SIO_010081: H3M12_RS12505
subclass of: SO_0000673
so part of: H3M12_RS12505
location: 13214..14137
location: region:13214-14137:1
so has part: feature:13214-14137:1:exon

WP_182151150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13214-14137:1:exon

H3M12_RS12510
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12510
old locus tag: H3M12_12510
so part of: sequence
location: 14315..15046
location: region:14315-15046:1
so has part: feature:14315-15046:1:exon
subclass of: SO_0000010

position:14315:1
position: 14315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15046:1
position: 15046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14315-15046:1:exon

H3M12_RS12510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12510
old locus tag: H3M12_12510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020090459.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Wzz/FepE/Etk N-terminal domain-containing protein
translation: MDSEQTISVMQIFGILRKHIKAILITTLVVFLASIFVTFFVMTPKYEATTEILVNRKLSASMQAAQYQQVQADVQMISTYKDIITSPTVLKTVNNTTSGYPGYPGSMRALKNAISISNQQNSQVFSITVKATDAKTAATIANETAKVFKKQVVKMMSVHNVSIVSKATPNYSAVSPRKTINLAIGLIVGLILGIGLALLREVTDRTVTSESYLTDELGLTSLGIVSEIDDKEVKKRITRERHS
SIO_010081: H3M12_RS12510
subclass of: SO_0000673
so part of: H3M12_RS12510
location: 14315..15046
location: region:14315-15046:1
so has part: feature:14315-15046:1:exon

WP_182151151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14315-15046:1:exon

H3M12_RS12515
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12515
old locus tag: H3M12_12515
so part of: sequence
location: 15116..15877
location: region:15116-15877:1
so has part: feature:15116-15877:1:exon
subclass of: SO_0000010

position:15116:1
position: 15116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15877:1
position: 15877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15116-15877:1:exon

H3M12_RS12515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12515
old locus tag: H3M12_12515
EC number: 2.7.10.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003677334.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CpsD/CapB family tyrosine-protein kinase
translation: MAWFKRNKKKLDDTSLKYGVGLVSYTEPNGMIAEQFKTIRTNIQFSLVDNQLQSILFTSSGPSEGKTTISNNMAVTWADQGTKVVLVDADLRRPAVHRSFDVSNRMGLTNYLSGNADLSAVVRETMVKDLSVITSGPVPPNPAELLGSKRIENLLSELTAEFDLVIVDAPPVNTVTDAQLLASQIDGTVLVVPQGIADKNGVRRAKKLLETVHANILGTVMNRVTAQKSVGYYGGNYYGGSYYGGYYGTDDKK
SIO_010081: H3M12_RS12515
subclass of: SO_0000673
so part of: H3M12_RS12515
location: 15116..15877
location: region:15116-15877:1
so has part: feature:15116-15877:1:exon

WP_182151152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15116-15877:1:exon

H3M12_RS12520
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12520
old locus tag: H3M12_12520
so part of: sequence
location: 15874..16656
location: region:15874-16656:1
so has part: feature:15874-16656:1:exon
subclass of: SO_0000010

position:15874:1
position: 15874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16656:1
position: 16656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15874-16656:1:exon

H3M12_RS12520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12520
old locus tag: H3M12_12520
EC number: 3.1.3.48
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002829826.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CpsB/CapC family capsule biosynthesis tyrosine phosphatase
translation: MTLVDLHCHILPGVDDGAKDLPMALGMARDAVAQGISHILLTPHHMDGEYTNHKTDVLRKTTAFQEALDAAKIPLTVFPGQEVHLTGELLRALDDDDILFMDEGGKYLLLELPHSGIPEYTEDMIFELQARGITPVIAHPERNHGFQKEPDRLYDFVEMGCLTQLTSSSYLGVFGDNVEKLTAKIIRSGMGFAFSSDAHNFKGRRFLMGDAFKKLEQQAGKDVATRFNDDARAILNGEEIVKPEFTRISVLKKKKRFWLF
SIO_010081: H3M12_RS12520
subclass of: SO_0000673
so part of: H3M12_RS12520
location: 15874..16656
location: region:15874-16656:1
so has part: feature:15874-16656:1:exon

WP_182151153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15874-16656:1:exon

H3M12_RS12525
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12525
old locus tag: H3M12_12525
so part of: sequence
location: 16656..17324
location: region:16656-17324:1
so has part: feature:16656-17324:1:exon
subclass of: SO_0000010

position:17324:1
position: 17324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16656-17324:1:exon

H3M12_RS12525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12525
old locus tag: H3M12_12525
EC number: 2.7.8.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020090461.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar transferase
translation: MDYGEEHTRNIAIDLNYERHRYVYRSVKRIFDFVASFFGLVLLLPVFLIVAIAIKLEEPKGPVFYSQIRLGRQQRPFKIYKFRSMVVNADSLKKYLIDKNEVDGAIFKIRMDPRVTKVGRFIRKHSIDELPQLLNVLLGQMSLVGPRPPLPGEVVNYTDYDKQRLFVKPGCTGLWQVTVRNEVGFDEMVGLDLKYILHRSVLFDLGVLIKTISVFFRPNGAY
SIO_010081: H3M12_RS12525
subclass of: SO_0000673
so part of: H3M12_RS12525
location: 16656..17324
location: region:16656-17324:1
so has part: feature:16656-17324:1:exon

WP_182151154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16656-17324:1:exon

H3M12_RS12530
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12530
old locus tag: H3M12_12530
so part of: sequence
location: complement(17415..18446)
location: region:17415-18446:-1
so has part: feature:17415-18446:-1:exon
subclass of: SO_0000010

position:17415:-1
position: 17415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18446:-1
position: 18446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17415-18446:-1:exon

H3M12_RS12530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12530
old locus tag: H3M12_12530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003679562.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MQEQNTTVRKKGQHLTSFERGRIATLHSQGYSNRAIARALNVCHQTINNELCRGEIDQVKKVNGQRQYYAVYSPETAQAKYEANRAHCHRPLKLVGVADFIDYFTTHLRQDGWSPDAAVGRAKLEGLYQPEEMVSTKTLYHYIDAQLLEVRNLDLLEKTRHRAKHHHSIKHKRLAGRSIDERPKSIDQRQEFGHFELDTVVGKRNGQESVILTLIERQSRCQILRLIDGRDADSVNYELAKICQEYGSIMKSVTADNGAEFSEVGAVLTGVADLYYAHPYRSSERGTNEAHNRMIRRDVPKGLSMDILGPHDIQAVESKLNNLPRRQTGYQTPKELFSAASAG
SIO_010081: H3M12_RS12530
subclass of: SO_0000673
so part of: H3M12_RS12530
location: complement(17415..18446)
location: region:17415-18446:-1
so has part: feature:17415-18446:-1:exon

WP_004270929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17415-18446:-1:exon

H3M12_RS12535
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12535
old locus tag: H3M12_12535
pseudo: true
so part of: sequence
location: <18570..18758
location: region:18570-18758:1
so has part: feature:18570-18758:1:exon
subclass of: SO_0000010

position:18570:1
position: 18570
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:18758:1
position: 18758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18570-18758:1:exon

H3M12_RS12535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12535
old locus tag: H3M12_12535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015473999.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: sugar nucleotide-binding protein
SIO_010081: H3M12_RS12535
subclass of: SO_0000673
so part of: H3M12_RS12535
location: <18570..18758
location: region:18570-18758:1
so has part: feature:18570-18758:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18570-18758:1:exon

H3M12_RS12540
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12540
old locus tag: H3M12_12540
so part of: sequence
location: 18810..19889
location: region:18810-19889:1
so has part: feature:18810-19889:1:exon
subclass of: SO_0000010

position:18810:1
position: 18810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19889:1
position: 19889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18810-19889:1:exon

H3M12_RS12540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12540
old locus tag: H3M12_12540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020090463.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LCP family protein
translation: MQHRKKTHPVRNTILVLILLLIAGGAAYGMTRYRSIKNAVNSSFNASGVTKERDVNKQLSDKKPISILLLGTDTGALGRSYKGRTDSMMVVTLNPTTNKTTITSVPRDTAVTIPGFASQSPSKINAAYAWGQAKTTIDTIQKMLNIPIDFYALINMGGLEKVIDQVGGVDVTPTLSFTYAGYTFKKGIKTHMNGKKALAYSRMRYDDPDNDYGRQKRQRAVLMALVKKRGSISTLLNQSFISSLAKQTQTDLTFDDLTSLAQNYRSATKNLKETHLQGTGKELNDQSMEVMKKSELQRVTNFIRNGLSLSYKKTGSIAVFSSTNSKSKSRSSSSSSSSSSTETNATTANGGTNNGRSRL
SIO_010081: H3M12_RS12540
subclass of: SO_0000673
so part of: H3M12_RS12540
location: 18810..19889
location: region:18810-19889:1
so has part: feature:18810-19889:1:exon

WP_233449257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18810-19889:1:exon

H3M12_RS12545
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12545
old locus tag: H3M12_12545
so part of: sequence
location: 19977..20906
location: region:19977-20906:1
so has part: feature:19977-20906:1:exon
subclass of: SO_0000010

position:19977:1
position: 19977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20906:1
position: 20906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19977-20906:1:exon

H3M12_RS12545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12545
old locus tag: H3M12_12545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_053338758.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30-like element ISLpl1 family transposase
translation: MSSITYSERIKIETFCELGLSNIQMGVRLNRSPSTISYELSRCQPYQAELAQTDAEYKRSRCGRKTKLSDELKQTILNHLHLSWSPGMIAHEFKLATKSIYNWLNQGRIGFSLNDLPEHGVRQRRNVDQRSKYNQSLGRSIEQRPMMINQRNRIGDFELDTVVGPRGHSKAVLLTLIDRKSRFLWAYRLKDRTTATVNEALTKFLTTFNGPVHSFTVDRGTEFSGLVSLESQYGIKTYYCHAYTPAERGSNERFNRNLRYFYPKGTRFEHISAQDLTTTLLQINQRPLKILDWQTPYQVMLTNLSKNSD
SIO_010081: H3M12_RS12545
subclass of: SO_0000673
so part of: H3M12_RS12545
location: 19977..20906
location: region:19977-20906:1
so has part: feature:19977-20906:1:exon

WP_182151138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19977-20906:1:exon

H3M12_RS12550
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12550
old locus tag: H3M12_12550
so part of: sequence
location: complement(20987..21337)
location: region:20987-21337:-1
so has part: feature:20987-21337:-1:exon
subclass of: SO_0000010

position:20987:-1
position: 20987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21337:-1
position: 21337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20987-21337:-1:exon

H3M12_RS12550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12550
old locus tag: H3M12_12550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011222016.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5388 domain-containing protein
translation: MVELLHNPNSNKSKIIPRKSAPQPQKEISISSLNESNKTKSKQIDGVTFDTTLRIDNHLKNFMKAMVILGYSSTQQNGLAQLQKTFFESLTESEQNTLTTQIQTLETGDANKVKSK
SIO_010081: H3M12_RS12550
subclass of: SO_0000673
so part of: H3M12_RS12550
location: complement(20987..21337)
location: region:20987-21337:-1
so has part: feature:20987-21337:-1:exon

WP_011222016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20987-21337:-1:exon

H3M12_RS12555
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12555
old locus tag: H3M12_12555
so part of: sequence
location: complement(21339..22139)
location: region:21339-22139:-1
so has part: feature:21339-22139:-1:exon
subclass of: SO_0000010

position:21339:-1
position: 21339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22139:-1
position: 22139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21339-22139:-1:exon

H3M12_RS12555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12555
old locus tag: H3M12_12555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015639692.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MGEVITFGNFKGGTGKTTNATLACLALARAGKKTLLIDFDPQANATDIYFKTAANLGHDDIKFNQTLLASIQEEDLSRSLVTLDKNIDFIPSSADFSLYPRIMEKKFKNNYKDRVTYFSKLLASLKEKYDFVVFDLPPTISLISDSALYASDWVLIILQTQEHSLQGAESFLKYIQEQVIDEYEAPSLNLLGILPVLLKNGAPVDHSTLEVAEEEFGKENMLKTLIRNMERIKRYSIRGVFLKDQFDKKIIRLYDSVAQEIIERAD
SIO_010081: H3M12_RS12555
subclass of: SO_0000673
so part of: H3M12_RS12555
location: complement(21339..22139)
location: region:21339-22139:-1
so has part: feature:21339-22139:-1:exon

WP_015639692.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21339-22139:-1:exon

H3M12_RS12560
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12560
old locus tag: H3M12_12560
pseudo: true
so part of: sequence
location: <23565..>23696
location: region:23565-23696:1
so has part: feature:23565-23696:1:exon
subclass of: SO_0000010

position:23565:1
position: 23565
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:23696:1
position: 23696
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23565-23696:1:exon

H3M12_RS12560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12560
old locus tag: H3M12_12560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002823702.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: plasmid replication initiation protein
SIO_010081: H3M12_RS12560
subclass of: SO_0000673
so part of: H3M12_RS12560
location: <23565..>23696
location: region:23565-23696:1
so has part: feature:23565-23696:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23565-23696:1:exon

H3M12_RS12565
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12565
old locus tag: H3M12_12565
so part of: sequence
location: complement(23712..24578)
location: region:23712-24578:-1
so has part: feature:23712-24578:-1:exon
subclass of: SO_0000010

position:23712:-1
position: 23712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24578:-1
position: 24578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23712-24578:-1:exon

H3M12_RS12565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12565
old locus tag: H3M12_12565
inference: COORDINATES: protein motif:HMM:NF033516.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MTELRRKFNVKLVAVLKAVRMSSSSYHDARHRKYQTNSSTLVDEIRSIRLNNPDYGYRTVTLALKNKGIQANHKAVLRIMRENNLLCQAFNRRTKKYNSYKGTVGKIAHNRLQRRFKTDRPFQKVVTDVTEVRWGEQTINERAYFTAYIDLYNGEIIEWAIDRKPTVDFVTCPLKRLLAKRPDLPYRMTIHSDQGFQYQNFRYVNILQQAHVFQSMSRKATCLDNAVAESIFHILKVGTVHNHQYRSYKELESGITNYVDYYNHRRIKAKLAGMSPVKYREHTSQLVA
SIO_010081: H3M12_RS12565
subclass of: SO_0000673
so part of: H3M12_RS12565
location: complement(23712..24578)
location: region:23712-24578:-1
so has part: feature:23712-24578:-1:exon

WP_233449258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23712-24578:-1:exon

H3M12_RS12570
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12570
old locus tag: H3M12_12570
so part of: sequence
location: complement(24578..25060)
location: region:24578-25060:-1
so has part: feature:24578-25060:-1:exon
subclass of: SO_0000010

position:25060:-1
position: 25060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24578-25060:-1:exon

H3M12_RS12570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12570
old locus tag: H3M12_12570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010623500.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MFSAKIKQQVLSEYLQGTSSRLLMRKYGIKGSATIHQWLTHFKLFGIQGLENHSRKTFYDYSFKIKVIKWRQEHRASYPVTAAHFKLKHPVMIWDWERKLIEGRLKPFKGRSLKMTDKAKQSKTLKQLQEENELLRIRVAYLEKLEALAQKKSQTKRKPS
SIO_010081: H3M12_RS12570
subclass of: SO_0000673
so part of: H3M12_RS12570
location: complement(24578..25060)
location: region:24578-25060:-1
so has part: feature:24578-25060:-1:exon

WP_024748243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24578-25060:-1:exon

H3M12_RS12575
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12575
old locus tag: H3M12_12575
so part of: sequence
location: 25139..25378
location: region:25139-25378:1
so has part: feature:25139-25378:1:exon
subclass of: SO_0000010

position:25139:1
position: 25139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25378:1
position: 25378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25139-25378:1:exon

H3M12_RS12575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12575
old locus tag: H3M12_12575
inference: COORDINATES: protein motif:HMM:NF036540.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKALRRYFNALRSNEKHIKNVENYLCGTMQNLFGVWWNKQAAREYAAKHPEEEKSAETIKQWVVLLVLKGYKILSKRF
SIO_010081: H3M12_RS12575
subclass of: SO_0000673
so part of: H3M12_RS12575
location: 25139..25378
location: region:25139-25378:1
so has part: feature:25139-25378:1:exon

WP_233449255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25139-25378:1:exon

H3M12_RS12580
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12580
old locus tag: H3M12_12580
so part of: sequence
location: 25600..25881
location: region:25600-25881:1
so has part: feature:25600-25881:1:exon
subclass of: SO_0000010

position:25600:1
position: 25600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25881:1
position: 25881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25600-25881:1:exon

H3M12_RS12580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12580
old locus tag: H3M12_12580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005693113.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelB/DinJ family antitoxin
translation: MAVKEKKRVQVKIDKDLADETEAVLNELGLNPTTAINMFYKRIVANGALPFNVSLSEEEKANLRFLKATEGTPVTEFKDAKEVADWLNDPDED
SIO_010081: H3M12_RS12580
subclass of: SO_0000673
so part of: H3M12_RS12580
location: 25600..25881
location: region:25600-25881:1
so has part: feature:25600-25881:1:exon

WP_182151139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25600-25881:1:exon

H3M12_RS12585
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12585
old locus tag: H3M12_12585
pseudo: true
so part of: sequence
location: 25871..26377
location: region:25871-26377:1
so has part: feature:25871-26377:1:exon
subclass of: SO_0000010

position:25871:1
position: 25871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26377:1
position: 26377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25871-26377:1:exon

H3M12_RS12585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12585
old locus tag: H3M12_12585
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002823700.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: H3M12_RS12585
subclass of: SO_0000673
so part of: H3M12_RS12585
location: 25871..26377
location: region:25871-26377:1
so has part: feature:25871-26377:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25871-26377:1:exon

H3M12_RS12590
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12590
old locus tag: H3M12_12590
so part of: sequence
location: complement(26367..26645)
location: region:26367-26645:-1
so has part: feature:26367-26645:-1:exon
subclass of: SO_0000010

position:26367:-1
position: 26367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26645:-1
position: 26645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26367-26645:-1:exon

H3M12_RS12590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12590
old locus tag: H3M12_12590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003603789.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNQYEKLVEQQARLKQKIEREDFKLRQSKYYESRQDRKARSRRLIQKGALLEKYFQADNLSVEQTEELLKIFANYVNAHKPDKLKNDQPNN
SIO_010081: H3M12_RS12590
subclass of: SO_0000673
so part of: H3M12_RS12590
location: complement(26367..26645)
location: region:26367-26645:-1
so has part: feature:26367-26645:-1:exon

WP_182151140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26367-26645:-1:exon

H3M12_RS12595
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12595
old locus tag: H3M12_12595
so part of: sequence
location: complement(26668..26895)
location: region:26668-26895:-1
so has part: feature:26668-26895:-1:exon
subclass of: SO_0000010

position:26668:-1
position: 26668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26895:-1
position: 26895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26668-26895:-1:exon

H3M12_RS12595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12595
old locus tag: H3M12_12595
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012552807.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIGGIVMSQSNLEKQEAKLKALNQKIKDEKNKIEQRLGKQIISQANLDYANLSNDQIKLLAKQFSEFLKVKSVDH
SIO_010081: H3M12_RS12595
subclass of: SO_0000673
so part of: H3M12_RS12595
location: complement(26668..26895)
location: region:26668-26895:-1
so has part: feature:26668-26895:-1:exon

WP_003555660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26668-26895:-1:exon

H3M12_RS12600
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12600
old locus tag: H3M12_12600
so part of: sequence
location: 27147..29207
location: region:27147-29207:1
so has part: feature:27147-29207:1:exon
subclass of: SO_0000010

position:27147:1
position: 27147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29207:1
position: 29207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27147-29207:1:exon

H3M12_RS12600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12600
old locus tag: H3M12_12600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016511122.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobQ family relaxase
translation: MAIFHMSFSNISAGKGRSAIASAAYRSGEKLFDDKEGRHYFYARSVMPESFILTPKNAPEWASDREQLWNEVEKKDRKSNSRYAKEFNVALPVELSESEQKELLTKYVQENFVDEGMVADVAIHRDHPDNPHAHVMLTNRPFNPDGTWGQKTKTEYILDSNGNKTKTPAGNVRNRKIWLVDWDKKEKINQWRHNWAVSVNQVLEQKNISDRISEKSFIEEGIDDTPMQHEGINSKRHERKEFNQQVKDYRKAKASYKNNQEKVINRGHLDSLSKHFSFNEKRVVKELSHELKTYISLESLDDKRRMLFNWKNSTLIKHAVGEDVTKQLLTINQQESSLKKADELLNKVVDRTTKKLYPELDFEQATQAERRELIKETDSEQTVFKGSELNERLMNIRDDLSAQQLLAFTKRPYVGWKLLIQQEKEVKIELKYTLMIHDDNLESLEHVDQGLLEKYSPTEQQKITRAVKDLRAIMAVKQVIKTQYHEVLKRAFPKGDLDGLPLIKQEQAYTAVMYYDPVLKPCQAETIEQWQANPPQVFSPQEHQQGLAYLSGQLSLDQLENHHLQRVLKHDGTKQLFLGECKVDPTIKNSQIEKIQKQLKGQQAKDDQYRKANIGHYQPLNYKPVSPDYYLKTAFSNAIMTALYARDEDYQRQKQAQGLKETEWEMTKKQRQHQTRNRHEDGGMHL
SIO_010081: H3M12_RS12600
subclass of: SO_0000673
so part of: H3M12_RS12600
location: 27147..29207
location: region:27147-29207:1
so has part: feature:27147-29207:1:exon

WP_182151141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27147-29207:1:exon

H3M12_RS12605
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12605
old locus tag: H3M12_12605
so part of: sequence
location: 29292..29510
location: region:29292-29510:1
so has part: feature:29292-29510:1:exon
subclass of: SO_0000010

position:29292:1
position: 29292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29510:1
position: 29510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29292-29510:1:exon

H3M12_RS12605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12605
old locus tag: H3M12_12605
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARQHEWISLSQAGIKLGHDRSYVSLWLRRHPNSMPEEYLMETGTVKLISLEGIEWIRQIARNNLNEFSDVD
SIO_010081: H3M12_RS12605
subclass of: SO_0000673
so part of: H3M12_RS12605
location: 29292..29510
location: region:29292-29510:1
so has part: feature:29292-29510:1:exon

WP_233449256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29292-29510:1:exon

H3M12_RS12610
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12610
old locus tag: H3M12_12610
so part of: sequence
location: complement(29494..30417)
location: region:29494-30417:-1
so has part: feature:29494-30417:-1:exon
subclass of: SO_0000010

position:29494:-1
position: 29494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30417:-1
position: 30417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29494-30417:-1:exon

H3M12_RS12610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12610
old locus tag: H3M12_12610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013355080.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MSTTILSFQNRVVIETLHKEGRSLRYIANYLDFSKTTIFNELHRLNSEYQAGLAQTDFERKVSQRGRKSSLTKNLKHLIEEKIQVQKWSPEQVAHVVGIAYKTVYNWIDQGWLDIQLPDLPDHGIRRHRAKEKRGTFNHGRSIEERPHKVETRQEFGHFEADTVLSGKRKGQAVATFVERKSRLTIVKRLHGRDSQSMTQAVLELASQLQDKLKTLTVDHGKEFANYQTIEQLTGTQVYFAHAYSPHERGSNENRNRVLRRFIPKGQAIEELSDYQLVQINWYLNSRPLKCLNWHTPIEIFLLNLRH
SIO_010081: H3M12_RS12610
subclass of: SO_0000673
so part of: H3M12_RS12610
location: complement(29494..30417)
location: region:29494-30417:-1
so has part: feature:29494-30417:-1:exon

WP_182151142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29494-30417:-1:exon

H3M12_RS12615
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12615
old locus tag: H3M12_12615
so part of: sequence
location: complement(30506..31156)
location: region:30506-31156:-1
so has part: feature:30506-31156:-1:exon
subclass of: SO_0000010

position:30506:-1
position: 30506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31156:-1
position: 31156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30506-31156:-1:exon

H3M12_RS12615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12615
old locus tag: H3M12_12615
inference: COORDINATES: protein motif:HMM:NF033516.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MCRILGVSRAQYYRYRSPKPSKRRAEDAGLKQRILRIFAEFKQRYGVMKIHHELNLELQPLQLRCSPRRISRLMKELDIHSVTVNKWKAASASKTKVEQRPNLLKQDFSTTGLNQKWTADMTYIQTKRNGWCYLSTIMDLHSRRIIGYSFSKKMDTDLVLKTLESAVKNRTITGDLIIHTDLGSQYTSDDYNQRLTELHIRHSYSRKGCPYDNGRL
SIO_010081: H3M12_RS12615
subclass of: SO_0000673
so part of: H3M12_RS12615
location: complement(30506..31156)
location: region:30506-31156:-1
so has part: feature:30506-31156:-1:exon

WP_182151143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30506-31156:-1:exon

H3M12_RS12620
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12620
old locus tag: H3M12_12620
so part of: sequence
location: complement(31210..31461)
location: region:31210-31461:-1
so has part: feature:31210-31461:-1:exon
subclass of: SO_0000010

position:31210:-1
position: 31210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31461:-1
position: 31461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31210-31461:-1:exon

H3M12_RS12620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12620
old locus tag: H3M12_12620
inference: COORDINATES: protein motif:HMM:NF013677.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MPTHYDKEFKQNIINLYKQGESAAQLAREYGIGYSTVHKWIQGQAKTQSGKSPDEIKAMEKRLASLSEENEILKKALGFLAQK
SIO_010081: H3M12_RS12620
subclass of: SO_0000673
so part of: H3M12_RS12620
location: complement(31210..31461)
location: region:31210-31461:-1
so has part: feature:31210-31461:-1:exon

WP_003553354.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31210-31461:-1:exon

H3M12_RS12625
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12625
old locus tag: H3M12_12625
so part of: sequence
location: 31586..32779
location: region:31586-32779:1
so has part: feature:31586-32779:1:exon
subclass of: SO_0000010

position:31586:1
position: 31586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32779:1
position: 32779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31586-32779:1:exon

H3M12_RS12625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12625
old locus tag: H3M12_12625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016526707.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine betaine/L-proline ABC transporter ATP-binding protein
translation: MVEKVKVKNVTKIFGKQISLAKKLLREGKSKAEILSQTGCTVGVNQASFAVNEGELFVIMGLSGSGKSTIIRMINRLINSTDGDIEIDEQGVMGLSKEELRHLRQDKIGMVFQNFALFPHKSVLQNAAYGLELKKFPLDVRNRKAHEALTLVGLTGYDDQYPDQLSGGMQQRVGLARALANNAEILLMDEAFSALDPLYRKEMQDLLLQIQEKMHKTIIFIGHDLNEALKLGDRIMIMRDGHIEQIDNPEDILTHPANDYVERFIEGVDRTKVLTASSVMTQAQVVNIGKAGPRVALRRMRANDISSIYVVDNDNKFVGFADAHDVSDLIKKGSEDLKSVLRTDVPKTSVDMPINALINDISKAAIPYVVLDDDDHLLGIILRSSVLAAIAGEEVSA
SIO_010081: H3M12_RS12625
subclass of: SO_0000673
so part of: H3M12_RS12625
location: 31586..32779
location: region:31586-32779:1
so has part: feature:31586-32779:1:exon

WP_131510722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31586-32779:1:exon

H3M12_RS12630
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12630
old locus tag: H3M12_12630
so part of: sequence
location: 32779..33618
location: region:32779-33618:1
so has part: feature:32779-33618:1:exon
subclass of: SO_0000010

position:33618:1
position: 33618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32779-33618:1:exon

H3M12_RS12630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12630
old locus tag: H3M12_12630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013356275.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: proline/glycine betaine ABC transporter permease
translation: MNIGKIPLADWINSGVDWLSQFTGFFNSVTIFFQVIIDGIQWAFDFLPQWVFILVVLALTYWVKRGQKKISFMVFEVLGLLLIWNLGYWRDMTQTLTLVLSSSLIAIVVGIPLGIWMAKSSRAEIVIKPILDFMQTLPAFVYLIPAVSFFGIGMVPGVLASVIFATPPTVRMTNLGIRQVPSDLIEVADSFGSTSWQKLIKLQLPLAKTTIMSGINQTMMLGLSMVVIASMIGALGLGTQVYFAVGRNDAGAGFAAGIAVVIVAIILDRITQSFNKTSK
SIO_010081: H3M12_RS12630
subclass of: SO_0000673
so part of: H3M12_RS12630
location: 32779..33618
location: region:32779-33618:1
so has part: feature:32779-33618:1:exon

WP_020923853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32779-33618:1:exon

H3M12_RS12635
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12635
old locus tag: H3M12_12635
so part of: sequence
location: 33626..34543
location: region:33626-34543:1
so has part: feature:33626-34543:1:exon
subclass of: SO_0000010

position:33626:1
position: 33626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34543:1
position: 34543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33626-34543:1:exon

H3M12_RS12635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12635
old locus tag: H3M12_12635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013356274.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine betaine ABC transporter substrate-binding protein
translation: MISLKKRILRYLQMATVIICLTAIVSACAKPAEYDSHKKLGPQINYTITGIEAGAGEMANTQTLLSKYKLKQANWQIMPSSTAAMISTLSKAVKNKQPIVVTGWQPHWMVAKYSLKFLKDPKHVYGNGESMRTITRKGLEKDNPGATKLLKNFHWTISMSNPVMLNINGGMNKQKAVNQFIKNHPKQVKAWTAGVPNGHGKKIKLVYTPYDYEIAATTLVTTLLKQKGYKATMQQLDVGVMWNSIANGSSDASVTAELPVTQGLYAKKYKGKYVQLRKNLKGAQTGLAVPKYMKNINTVDDLKNK
SIO_010081: H3M12_RS12635
subclass of: SO_0000673
so part of: H3M12_RS12635
location: 33626..34543
location: region:33626-34543:1
so has part: feature:33626-34543:1:exon

WP_034546226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33626-34543:1:exon

H3M12_RS12640
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12640
old locus tag: H3M12_12640
so part of: sequence
location: complement(34788..35753)
location: region:34788-35753:-1
so has part: feature:34788-35753:-1:exon
subclass of: SO_0000010

position:34788:-1
position: 34788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35753:-1
position: 35753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34788-35753:-1:exon

H3M12_RS12640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12640
old locus tag: H3M12_12640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014215130.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MTYTHLTIDELATIYSFWKLGKEAYLVAPALHRSAETVYRIYRFLDAGGTIIDYQCHYRKHKQHCGRKPIQLRPDELAYIQAKTQAGWQPDTIINRQERAFSCGVRTLYRLFKRGVLGLSTKDLPMHGKRHPNGYIERRGKAGQLGRDLKNRYQDYPNFNQEFGHLEGDTVQGKNHQGAVTTLVERQTKVAIVLNSHTKSAHDVNRSLAGWLSKLPRHLFKSITFDNGKEFAGWRTIANQFDLNIYFAAVGAPNQRGLNENTNGLLRKDGLRHNLIMDQLSDGFFQTVASRRNHIPRKSLGYQTPLEAFISQITDEQLKNF
SIO_010081: H3M12_RS12640
subclass of: SO_0000673
so part of: H3M12_RS12640
location: complement(34788..35753)
location: region:34788-35753:-1
so has part: feature:34788-35753:-1:exon

WP_182151158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34788-35753:-1:exon

H3M12_RS12645
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12645
old locus tag: H3M12_12645
so part of: sequence
location: complement(35997..36581)
location: region:35997-36581:-1
so has part: feature:35997-36581:-1:exon
subclass of: SO_0000010

position:35997:-1
position: 35997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36581:-1
position: 36581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35997-36581:-1:exon

H3M12_RS12645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12645
old locus tag: H3M12_12645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014567995.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MAKIGYARVSSKEQHLDRQLAALKGVDKLFTDKLSGANTNRPELQKMLAYIREGDIVLVTELDRLGRNNQDLTKIMNSIQNKGATLDVLNLPSMTGIADPNLRQLMTNLIIELYKYQAESERKRIIDRQQQGIALAKQQGKYHGRKPQYAKDDPRLQHAFKLYQTGMSDVDVARNTGIKRTTFIRYRKKFNIQR
SIO_010081: H3M12_RS12645
subclass of: SO_0000673
so part of: H3M12_RS12645
location: complement(35997..36581)
location: region:35997-36581:-1
so has part: feature:35997-36581:-1:exon

WP_182151145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35997-36581:-1:exon

H3M12_RS12650
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12650
old locus tag: H3M12_12650
pseudo: true
so part of: sequence
location: complement(36873..>37322)
location: region:36873-37322:-1
so has part: feature:36873-37322:-1:exon
subclass of: SO_0000010

position:36873:-1
position: 36873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37322:-1
position: 37322
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36873-37322:-1:exon

H3M12_RS12650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12650
old locus tag: H3M12_12650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000616024.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA repair ATPase
SIO_010081: H3M12_RS12650
subclass of: SO_0000673
so part of: H3M12_RS12650
location: complement(36873..>37322)
location: region:36873-37322:-1
so has part: feature:36873-37322:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36873-37322:-1:exon