Levilactobacillus suantsaii strain CBA3634 plasmid pCBA3634-02, complete sequence.
type: Entry
definition: Levilactobacillus suantsaii strain CBA3634 plasmid pCBA3634-02, complete sequence.
sequence version: NZ_CP059605.1
sequence date: 2022-12-08
sequence: sequence
division: CON
label: NZ_CP059605.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN15659520
keyword: RefSeq
source: Levilactobacillus suantsaii
organism: Levilactobacillus suantsaii
taxonomy: Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Levilactobacillus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP059605.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: DEC-2019\nAssembly Method :: HGAP v. 3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 273.0x\nSequencing Technology :: PacBio RSII; Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/08/2022 06:34:17\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,568\nCDSs (total) :: 2,477\nGenes (coding) :: 2,405\nCDSs (with protein) :: 2,405\nGenes (RNA) :: 91\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 70\nncRNAs :: 3\nPseudo Genes (total) :: 72\nCDSs (without protein) :: 72\nPseudo Genes (ambiguous residues) :: 0 of 72\nPseudo Genes (frameshifted) :: 36 of 72\nPseudo Genes (incomplete) :: 21 of 72\nPseudo Genes (internal stop) :: 23 of 72\nPseudo Genes (multiple problems) :: 8 of 72\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 42530
topology: circular
so has quality: SO_0000988
location: 1..42530
location: region:1-42530:1
RO_0002162: 2292255

NZ_CP059605
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN15659520
type: BioSample
SIO_000068: biosample

1
title: Culture-independent analysis of the bacterial communities in Chinese fermented vegetables and genomic analysis of lactic acid bacteria
author: Roh, S.W.
author: Song, H.S.
journal: Unpublished

2
title: Direct Submission
author: Roh, S.W.
author: Song, H.S.
journal: Submitted (28-JUL-2020) Microbiology and Functionality Research Group, World Institute of Kimchi, 86, Kimchi-ro, Nam-gu, Gwangju, Gwangju 61755, South Korea

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42530:1
position: 42530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-42530:1:source
so part of: sequence
organism: Levilactobacillus suantsaii
mol type: genomic DNA
strain: CBA3634
plasmid: pCBA3634-02
country: South Korea
collection date: 2019-07

2292255
type: Taxonomy
SIO_000068: taxonomy

H3M12_RS12170
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12170
old locus tag: H3M12_12170
so part of: sequence
location: join(42467..42530,1..134)
location: region:1-42530:1
so has part: feature:42467-42530:1:exon
so has part: feature:1-134:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:42467-42530:1:exon

position:42467:1
position: 42467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-134:1:exon

position:134:1
position: 134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

H3M12_RS12170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12170
old locus tag: H3M12_12170
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: DUF1056 family protein
translation: MIFKRFFAMIWHYFDLICFVSALIVADYGAFLFGKPWGVMAVAVTLFVIGWLSEVINTSQSEGGD
SIO_010081: H3M12_RS12170
subclass of: SO_0000673
so part of: H3M12_RS12170
location: join(42467..42530,1..134)
location: region:1-42530:1
so has part: feature:42467-42530:1:exon
so has part: feature:1-134:1:exon

WP_182151115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42467-42530:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-134:1:exon

H3M12_RS12175
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12175
old locus tag: H3M12_12175
so part of: sequence
location: 137..1291
location: region:137-1291:1
so has part: feature:137-1291:1:exon
subclass of: SO_0000010

position:137:1
position: 137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1291:1
position: 1291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137-1291:1:exon

H3M12_RS12175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12175
old locus tag: H3M12_12175
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015380482.1
GO component: GO:0044423 - virion component [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0019068 - virion assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage portal protein
translation: MPVFRPPEIKNQVQSVPVEDSDIVNFLTPNGQRDYVSATDALKNSDIYSVVSQLSGDLATVQLSANMPRAQGILNNPSSTANGHAFWQSMFAQLLLGGECFAYRWRNRNGLDMRWEYLRPSQVETYLLEDGSGLTYTVTFDETQLGVRQYVPQGDMIHIRLTGINGGQTGISPLESLTSELQIKDASNDLTLAALARSISAPGVLSIQHGGLLSEKMKASRSRNFMRQVNKSNGGPVVIDELEEYKPLEMKADVTKLLSQTDWTSKQIAKVFGIPDSYLNGQGDQQSNIDQIKGMYANALNRYMQCIISELDNKLNATITANLRPAIDPLGDAFATTLSGLAKDGTIANNQATWVLQQLGYFPVDMPEAIQSVEGGDNNEEGND
SIO_010081: H3M12_RS12175
subclass of: SO_0000673
so part of: H3M12_RS12175
location: 137..1291
location: region:137-1291:1
so has part: feature:137-1291:1:exon

WP_182151116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137-1291:1:exon

H3M12_RS12180
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12180
old locus tag: H3M12_12180
so part of: sequence
location: 1284..1988
location: region:1284-1988:1
so has part: feature:1284-1988:1:exon
subclass of: SO_0000010

position:1284:1
position: 1284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1988:1
position: 1988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1284-1988:1:exon

H3M12_RS12180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12180
old locus tag: H3M12_12180
EC number: 3.4.21.92
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002833128.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Clp protease ClpP
translation: MIKGDVVDNETAAFYQFFGMPAVSPASVSDVLDSAGPNDDVEVDIASNGGDVFAASEIYTMLKNYQGNVTVNVQGLAASAASVIAMAGDKVSISPTAQIMIHKAWSGVQGNADDLSHESNVLDSIDQSIVAAYVAKTGMAAEDVLQLMANETWMTAQDAVDKGFADEIMFVDDKQPQFTNSVSEIPSKAAINKFMNLISKSQPKPTQPKESQPANALMQSRLAILIDKYNKEAN
SIO_010081: H3M12_RS12180
subclass of: SO_0000673
so part of: H3M12_RS12180
location: 1284..1988
location: region:1284-1988:1
so has part: feature:1284-1988:1:exon

WP_182151133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1284-1988:1:exon

H3M12_RS12185
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12185
old locus tag: H3M12_12185
so part of: sequence
location: 1988..3229
location: region:1988-3229:1
so has part: feature:1988-3229:1:exon
subclass of: SO_0000010

position:3229:1
position: 3229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1988-3229:1:exon

H3M12_RS12185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12185
old locus tag: H3M12_12185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015380480.1
GO component: GO:0044423 - virion component [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0019068 - virion assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage major capsid protein
translation: MVVENKNINQLNDAWIDQGQKVSAMTDKLNLIALSDKFDKKEFDELSAERDNAVARRDALHTQLEEERKAQEIANMADNDKKPLNDQEVKIEDEFIKNFQGMIKGDPKVMNLITSSTDESGNAIGLTIPQDIQTAINTLVRQYDSLQQYVKREAVSTPTGSRVWEKWTDVTPLADLDDETAKIGDNDDPHLTLIKYAIHRYAGISTVTNSLLKDTADNIMAWLSQWIAKKVVVTRNAKIIEVMNKAPKKPTLAKFDDIITMINTAVDPAIKSTSVLMTNTSGFNVLSEVKDAMGRYLLQPDPTQPDRYLIRGKQIVEVADKWLPNTGTASAPVYPLYYGDLSQAVTLFDRENMSLLTTNIGGGAFETDQTKIRVIDRFDVEPTDTEAFVAGSFAAIADQPANFAAGSTTTTGK
SIO_010081: H3M12_RS12185
subclass of: SO_0000673
so part of: H3M12_RS12185
location: 1988..3229
location: region:1988-3229:1
so has part: feature:1988-3229:1:exon

WP_182151117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1988-3229:1:exon

H3M12_RS12190
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12190
old locus tag: H3M12_12190
so part of: sequence
location: 3252..3578
location: region:3252-3578:1
so has part: feature:3252-3578:1:exon
subclass of: SO_0000010

position:3252:1
position: 3252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3578:1
position: 3578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3252-3578:1:exon

H3M12_RS12190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12190
old locus tag: H3M12_12190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015380479.1
GO process: GO:0016032 - viral process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: head-tail connector protein
translation: MPTLDDLKLSLRLDGDADDELLTGYLNTAKSYITQAVGTESDSFYEDASVVDLFNTAVMALASAYYNYRSSLVPTTAISVNLPVNSIIGQLRGLYDLKMEAITDDQSN
SIO_010081: H3M12_RS12190
subclass of: SO_0000673
so part of: H3M12_RS12190
location: 3252..3578
location: region:3252-3578:1
so has part: feature:3252-3578:1:exon

WP_182151118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3252-3578:1:exon

H3M12_RS12195
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12195
old locus tag: H3M12_12195
so part of: sequence
location: 3562..3918
location: region:3562-3918:1
so has part: feature:3562-3918:1:exon
subclass of: SO_0000010

position:3562:1
position: 3562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3918:1
position: 3918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3562-3918:1:exon

H3M12_RS12195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12195
old locus tag: H3M12_12195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008470458.1
GO component: GO:0044423 - virion component [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0019068 - virion assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage head closure protein
translation: MTKAINPSRMTFRIAFGHDADIGEVNPNTGTPIQKFSADFSCWAGQWSLNVQQQLTIAGAGITNAVVFFIRHNPAVNETLQVQRGFDLYKIDSISADDGLQNEGFDLITCHRVVTKHG
SIO_010081: H3M12_RS12195
subclass of: SO_0000673
so part of: H3M12_RS12195
location: 3562..3918
location: region:3562-3918:1
so has part: feature:3562-3918:1:exon

WP_182151119.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3562-3918:1:exon

H3M12_RS12200
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12200
old locus tag: H3M12_12200
so part of: sequence
location: 3911..4330
location: region:3911-4330:1
so has part: feature:3911-4330:1:exon
subclass of: SO_0000010

position:3911:1
position: 3911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4330:1
position: 4330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3911-4330:1:exon

H3M12_RS12200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12200
old locus tag: H3M12_12200
inference: COORDINATES: protein motif:HMM:TIGR01725.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HK97 gp10 family phage protein
translation: MASLDEQLQHYFLQVKKKVPNKVQQQVITKAGADQLRDSYFQAAKSKHYRYGRDTSHVKHLADAVVADDHDVDGYATGNSTVGFDKDPINHARIALFLNNGTVHIKGDHFIDTAIQSSKDKVLAAEYAKYKELTGGDSH
SIO_010081: H3M12_RS12200
subclass of: SO_0000673
so part of: H3M12_RS12200
location: 3911..4330
location: region:3911-4330:1
so has part: feature:3911-4330:1:exon

WP_182151120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3911-4330:1:exon

H3M12_RS12205
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12205
old locus tag: H3M12_12205
so part of: sequence
location: 4317..4712
location: region:4317-4712:1
so has part: feature:4317-4712:1:exon
subclass of: SO_0000010

position:4317:1
position: 4317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4712:1
position: 4712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4317-4712:1:exon

H3M12_RS12205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12205
old locus tag: H3M12_12205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008214381.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF806 family protein
translation: MILIKLPVTQVYEIIKANKSSWIDGLYPENIPNIVDKSGSKTLVLITSVSEPLSGYKNDTFSEVSASIQVQIFFSKTVAINVLDAQLELMNLLDDNGWIIATRYPNVVDPDTEQVTATFSVFKKIKIKRGN
SIO_010081: H3M12_RS12205
subclass of: SO_0000673
so part of: H3M12_RS12205
location: 4317..4712
location: region:4317-4712:1
so has part: feature:4317-4712:1:exon

WP_233449252.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4317-4712:1:exon

H3M12_RS12210
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12210
old locus tag: H3M12_12210
so part of: sequence
location: 4716..5336
location: region:4716-5336:1
so has part: feature:4716-5336:1:exon
subclass of: SO_0000010

position:4716:1
position: 4716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5336:1
position: 5336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4716-5336:1:exon

H3M12_RS12210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12210
old locus tag: H3M12_12210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003636428.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail protein
translation: MSTHGVKDVTFGLIDSTGAIIADATKGISTTGIYLVDGDTQGATQANVTGLEAAGTVQYANDGPKRVSNGSMEPQVALEFLDIDFDILQKLKGFVNDGKGGWTRQLPKPHVAMLVHSRSYGGVDIYEGFANGQLIEAGMNHGTDNNAETDANTTLTYQGLDPLKADTFDGQPYKIWTSADTDFDKTAMMAEVFGGYKAASSNPTNG
SIO_010081: H3M12_RS12210
subclass of: SO_0000673
so part of: H3M12_RS12210
location: 4716..5336
location: region:4716-5336:1
so has part: feature:4716-5336:1:exon

WP_182151121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4716-5336:1:exon

H3M12_RS12215
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12215
old locus tag: H3M12_12215
so part of: sequence
location: 5500..5871
location: region:5500-5871:1
so has part: feature:5500-5871:1:exon
subclass of: SO_0000010

position:5500:1
position: 5500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5871:1
position: 5871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5500-5871:1:exon

H3M12_RS12215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12215
old locus tag: H3M12_12215
inference: COORDINATES: protein motif:HMM:NF018589.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail tube assembly chaperone
translation: MKINIAKLGLKKKTAEVKTTVKVVNEATNLQILMLKMDKMQLDSDADPLTVMEQSQQAVTAMTSFLQAVLKLSEKDLDTVMNAVTMEELSNFISYVLARIQGLTEEQWKQILKENAEEEDPKK
SIO_010081: H3M12_RS12215
subclass of: SO_0000673
so part of: H3M12_RS12215
location: 5500..5871
location: region:5500-5871:1
so has part: feature:5500-5871:1:exon

WP_182151122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5500-5871:1:exon

H3M12_RS12220
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12220
old locus tag: H3M12_12220
so part of: sequence
location: 5871..6083
location: region:5871-6083:1
so has part: feature:5871-6083:1:exon
subclass of: SO_0000010

position:6083:1
position: 6083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5871-6083:1:exon

H3M12_RS12220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12220
old locus tag: H3M12_12220
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGRLNVLIHDLEDAQEDQAYFKQQMMANSGVLPSQLDGEDYYELIRINQAKPKDKRAEDPMAMVNRLRGK
SIO_010081: H3M12_RS12220
subclass of: SO_0000673
so part of: H3M12_RS12220
location: 5871..6083
location: region:5871-6083:1
so has part: feature:5871-6083:1:exon

WP_024525141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5871-6083:1:exon

H3M12_RS12225
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12225
old locus tag: H3M12_12225
so part of: sequence
location: 6099..10781
location: region:6099-10781:1
so has part: feature:6099-10781:1:exon
subclass of: SO_0000010

position:6099:1
position: 6099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10781:1
position: 10781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6099-10781:1:exon

H3M12_RS12225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12225
old locus tag: H3M12_12225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020282073.1
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0016032 - viral process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail tape measure protein
translation: MATVSNTMATEVKLDTVSAASSLKTLNNAIKATTNEWKANEISLKSAKDSLGAAQAKYEGLGKTMQALQAKIDRLKERQESLDTSTTKGSDKYARLSKDLANAENKMASLTAQQDRAKKSVDYYQSGLADLQTKYKSITAVSKSYVDALENQGNKAQAGRAKLNGLRESYRNLSDQLKIQQTELAKLKTSSGGASEAYNKQLIRVNQTTTSMAKQKTEIGKLAGKYGTMSSSMAKMSDGAAKARHRIANIGQAFKGAAITAASGLTSLGVATIAGAKKATNLNKVYQVNQNLLVTSGEKARKAISQVSKMQRDGAKYSIKYGVAQKEIAEQYQDLIKRGHTGAEAIAVMKSELQASVASGDDFKDVIKVSSQAIEAFGMKTNNTAKMVKNTKRVVNDLAYASDVTATDFHSLGKGMEYVGDTAKNAGFSIEQTSAAMGELSNHGMEADKAGTGLRKTITSLASPTKTAMGALKEIGIKSTKIFQDAKGNFKSLPAIFKIIEEHTKNLGGAKKADVFKRIFGQTGMQAAQTLAKYDGSLKKLTDDVTKAGEKGKYVETLAKRNSDNAKMNVERFKMAGQQLEIMIGAKLLPVITRAAQDMTKAFNNKDTQKGLTWLIGGVAKLASGFLKIIEFTSKHTKTIAAFAVAFGSVLAVSKIARFIAATTEAIGVIKDFTAVQWLLNVAMDANPIGLAVVAIGLLAAGLYEAYKHIKPFRKWVNKTAKSVVHFGKSIGKWAGHIGKSVKNGINRIGRNWNKFKSSFKKSWDKHWSAVGSKLKHSWNASVHNTKSFFGSMGSHFSSFKNSFKKSWDKHWSAVGSKLKHSWNTSVHNTKSFFGSMGSHFHSFRNRFSHSWTSHWNKMRSKLHSYWNKDLKHTKRFGTSMGHWLGAFKKSFKEGWTSLVSGVKHIFSHLWKDLKKLASNGMNDMINIINSGINLVDGVIHTFGGKKKAIGDIGHVHFATGTGVFSNQRRAITKPTMAVLNDGSDSPETGNKEAVFLPNGQSGIVQGRNTKAMLPAGTEVLNASETKLFMGMQGITHFAKGSSNWFGSLMSGIGSGIGDVSGWLIKKATGLKKFFTTAEKIIAHPIKSLDSMFNYTKSGAGVVADITKGMFHNVKKQAGNWWSSLWSMVDLDGGSAGGNWRHNPGLSETNGFGDSRSFGSHDGVDFSGPLGSAIRAVHGGTVTHVGRPLYGWPYSQLGDVITVASNDGWQEIYQEFGGMNNIKTSTGDVIKTGQKIATLGRLNGAGSGSHVHIGVSHGSLWDHGGSSTKGWYDVTKMHGKSDGSPKSSKQSGNIKGIKSQVGSGFFKFMDKLANMFSSIGGSGGASYGGASMIEKAAKAMHVNLSSGELAIIKRVIMHESGGNAKVMQKVHDINSASGHPAKGLLQFVPSTFSSYAVKGHKNILSAYDQLLAMFNDSNWRSDVHAGGWGPSGHRRYANGGISRFEKLAHISEGNKTESIVPWDITKRARAYQIMDTTMKEFAKTDKPQQSTTQSAQSTDLSELIKQGKEIIGLMAELISGQQNPVPAVVSANDIYNGYNRMDTKTKLSKNLGRGYTNGIQ
SIO_010081: H3M12_RS12225
subclass of: SO_0000673
so part of: H3M12_RS12225
location: 6099..10781
location: region:6099-10781:1
so has part: feature:6099-10781:1:exon

WP_182151123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6099-10781:1:exon

H3M12_RS12230
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12230
old locus tag: H3M12_12230
so part of: sequence
location: 10768..12612
location: region:10768-12612:1
so has part: feature:10768-12612:1:exon
subclass of: SO_0000010

position:10768:1
position: 10768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12612:1
position: 12612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10768-12612:1:exon

H3M12_RS12230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12230
old locus tag: H3M12_12230
inference: COORDINATES: protein motif:HMM:NF017520.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail family protein
translation: MAFNDVNTFDYAFDENGTGGFNSDKDLEVLVNHVSKPIAPTITESFQDVPGRYGGVFLGNSYGEKQIDIPITLFPTDRDDYNRILNNLSKALINTHDDADTQYPLRFNDQPEVVYYGHFTAIPTPKFINEGVQDCTTTLTFMLADPRGFLPQRDIKITSNDQIISPAGNTTVQPVIHIIPKTDLYYFGYTLGDKYVAVGYHVDDGSTVTDANGHITSLTPHQELQVHDPCNSMSTWVQAGQDTQAIKVYRGKNDGKATATATALMVAKDSKGHYNWGTTGKHKDFYGPVIIHQGIPKISNYWKVSMRFHHIKRMKNERAMGKVEGYLLDSNGNVCGRMGISDYAHGRYPRGYIQLGSSFNAINDKGNYLTLLYNEGGRKKNGQNHHDVKVHLTKKVTVKTISKAKKKVSKPRVKTKSKTIKTYVMETTYMNKDAYSNFFGEFSLERQKKTIGGKVYDNWVAEIQEWDPVHGVAYSPNNTNRVHIHTEKLDKSGKFGFALANVAATFMKHDIKEDLVSPKVGYYSDFETLTDLKIYTSDGSDDPDDIPHVIAHAGEEIIIDSADNTVTVAGRNVDKYVSWLSTFPPIEGDVSQEMHFTPDPANADITLEYKPAIK
SIO_010081: H3M12_RS12230
subclass of: SO_0000673
so part of: H3M12_RS12230
location: 10768..12612
location: region:10768-12612:1
so has part: feature:10768-12612:1:exon

WP_182151124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10768-12612:1:exon

H3M12_RS12235
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12235
old locus tag: H3M12_12235
so part of: sequence
location: 12629..15220
location: region:12629-15220:1
so has part: feature:12629-15220:1:exon
subclass of: SO_0000010

position:12629:1
position: 12629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15220:1
position: 15220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12629-15220:1:exon

H3M12_RS12235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12235
old locus tag: H3M12_12235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020282070.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail spike protein
translation: MYVILDKNLKRVATLDTSTDTNIFWGETIQQQLADDNSSNDSITEASLANTSDPNANSKSWNDTFTGLTMVADSPAAQYLKVGNHLAAYDQANDRWRVYRIYTVDETMDTTYGTNLISADAINLLIWRLGKTIPTKKESKECTLSAAMNWIIAGTGITLVDNATSGLLSDFSIDGESSSQTLLQTILTTYDCEADGYVKLDSSGIVVDTILELSDQRGQNTGRRITYGDNMLSIKRETVDTTLITKLYVYGSGGASISTAKGNGGRNFVTDASANSRYNNDANTWLEGSITSSTVSEPDALLSLGLKTLRLYNHPRVNYSVDVTSDFDAQLGDTIKVIDLTMTPVLTLQARVIQRTTSESDPTQNKVVIGEFSTVTVVTPNFIKNMEQRWNDHVKKLFEDAKKNQNAASISLITPLGQSWTNTDTSKRVIARLFIEGENVTSFLSAAAFNWEYIQQDGTHNLTWESQHSKDGYEVTITPPFVGSLVVSIDDAFVKDESEMWIDTGVNADGTFKKLWETTDGNPDEFGNNHVGALQFSYKMSNGEVLASYAYKGKQNQSNLSDCQFLHWSADGKLIDSMIVQGGQHGGSFGYDEANNLIYSQIKDLSGGKNWLATFPYTPHAVITSGSSGVTKWCEMETYVRPNVDLTNGLWIGSQMNGTVEVCNISDLKAGNYLPIIRFKLQDFGWNPAPSGVTNNGTYNTIQANSIAYPYAFFTTGDINNKDDRLVMCINLITQSVIFNYQIEPSQDIQLSVPIEYGGHFEPEGIYPDLAHDQLIIGFNVSEYRDAVHNTMISHSGLWSIPIGIRDDSEDLAVTYPAEDEGENSEVEEPVVIPDDTDDSDSASDDDSDFNIDDGSTYKEVVE
SIO_010081: H3M12_RS12235
subclass of: SO_0000673
so part of: H3M12_RS12235
location: 12629..15220
location: region:12629-15220:1
so has part: feature:12629-15220:1:exon

WP_182151125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12629-15220:1:exon

H3M12_RS12240
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12240
old locus tag: H3M12_12240
so part of: sequence
location: 15217..16455
location: region:15217-16455:1
so has part: feature:15217-16455:1:exon
subclass of: SO_0000010

position:15217:1
position: 15217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16455:1
position: 16455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15217-16455:1:exon

H3M12_RS12240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12240
old locus tag: H3M12_12240
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: tail fiber domain-containing protein
translation: MIIATGSIDINEATKLAQQASDAAKDASDNLKKVSGNFDSMLNGKITQSIYKPGQAEDTNNHQKGDLWIVTDSPGYTGTATEMYIYNGTAWQEKKWDQQALSVKQLSALTANLGTVTSGTLNSVEVFAKNLTLDVGADSGDGTTGEFDGDAGHNAKNWHGMVSQGMGVNFNHGLMHMNAQNNNNGNYDATYIGPNDIKIRETSQLDPRSELFGRVDIDSTGIVIGTTWNDIKQTHLNSDGEVFVGGELNSLDGIKAGGRNDGYKHNCSISPTSGSVIYFHNKADNTIDIHAGDIVSHGQTIKSTLSSKRSISDISTAAALAKINATNIRRWQYKDDDNSKIHVGPIIDDVNELGNKQYSVPIDLITQAGDETGFNESNALSMTMAALQELSKRNDQLSQRVTQLERKVNNAK
SIO_010081: H3M12_RS12240
subclass of: SO_0000673
so part of: H3M12_RS12240
location: 15217..16455
location: region:15217-16455:1
so has part: feature:15217-16455:1:exon

WP_182151126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15217-16455:1:exon

H3M12_RS12245
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12245
old locus tag: H3M12_12245
so part of: sequence
location: 16445..16684
location: region:16445-16684:1
so has part: feature:16445-16684:1:exon
subclass of: SO_0000010

position:16445:1
position: 16445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16684:1
position: 16684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16445-16684:1:exon

H3M12_RS12245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12245
old locus tag: H3M12_12245
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLNSLFTSLNTDGSTHIKYTYTFTKMQHIIYGEFDASQEDTTKAQQAAKDTDSWAGFKQLVLTRLKTEATNALGGGTSE
SIO_010081: H3M12_RS12245
subclass of: SO_0000673
so part of: H3M12_RS12245
location: 16445..16684
location: region:16445-16684:1
so has part: feature:16445-16684:1:exon

WP_182151127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16445-16684:1:exon

H3M12_RS12250
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12250
old locus tag: H3M12_12250
so part of: sequence
location: 16677..17132
location: region:16677-17132:1
so has part: feature:16677-17132:1:exon
subclass of: SO_0000010

position:16677:1
position: 16677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17132:1
position: 17132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16677-17132:1:exon

H3M12_RS12250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12250
old locus tag: H3M12_12250
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKELYFADGNNEVKYLDTTASFNLAITQDGSAFDLTNATAIDVKVANDTGYVFDKSIDMATITQPLAGLITMPVDAEVMNALVPDDYLIEVWVTLSSLITPGSQEGLTDDGSTADTTTSTTDTTTYTAIFPSGDPQGFTITDNLMSATQN
SIO_010081: H3M12_RS12250
subclass of: SO_0000673
so part of: H3M12_RS12250
location: 16677..17132
location: region:16677-17132:1
so has part: feature:16677-17132:1:exon

WP_182151128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16677-17132:1:exon

H3M12_RS12255
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12255
old locus tag: H3M12_12255
so part of: sequence
location: 17144..17572
location: region:17144-17572:1
so has part: feature:17144-17572:1:exon
subclass of: SO_0000010

position:17144:1
position: 17144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17572:1
position: 17572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17144-17572:1:exon

H3M12_RS12255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12255
old locus tag: H3M12_12255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003558826.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFKEITDVFNWLNNVGVFAFLMVLIPAVYKLVKPLLTRKVQTEKNTHVKQGLEFGLNLANTIVPEMAVMAGLSLSDRKKEAIRFVNSQLTANGFDLDIQTISGLVEKAYQAYKMAGGDNHAPVVTPAPAEAITPLEGTDSND
SIO_010081: H3M12_RS12255
subclass of: SO_0000673
so part of: H3M12_RS12255
location: 17144..17572
location: region:17144-17572:1
so has part: feature:17144-17572:1:exon

WP_182151129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17144-17572:1:exon

H3M12_RS12260
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12260
old locus tag: H3M12_12260
so part of: sequence
location: 17565..18383
location: region:17565-18383:1
so has part: feature:17565-18383:1:exon
subclass of: SO_0000010

position:17565:1
position: 17565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18383:1
position: 18383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17565-18383:1:exon

H3M12_RS12260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12260
old locus tag: H3M12_12260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008214406.1
GO function: GO:0003796 - lysozyme activity [Evidence IEA]
GO process: GO:0016998 - cell wall macromolecule catabolic process [Evidence IEA]; GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GH25 family lysozyme
translation: MTKKIVDLSSYQSDSLAYMKRLKGWGAKDIMVKLTEGTGYLNPKAGNQIANGFKVFDTVGVYHFFHGRGTAEAKYFLSWVKKMGLDKSTVLAIDVEAPDLPWKTTSQVNVFLRYLISHGYKNVITYGSGSWFNAGRINRSRLVNKAIWVAAYGVSQPGVANANAWQYTDNWHGVDCSYDFDGKLSGKVTKATHKKASYWADNGLYEVITSKVNVYGKSALDKANKRRIHFSKGSTIYGKAVKYGKVYRIKTGVGYISANKEYVKLVRKSGGK
SIO_010081: H3M12_RS12260
subclass of: SO_0000673
so part of: H3M12_RS12260
location: 17565..18383
location: region:17565-18383:1
so has part: feature:17565-18383:1:exon

WP_182151130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17565-18383:1:exon

H3M12_RS12265
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12265
old locus tag: H3M12_12265
so part of: sequence
location: 18383..18655
location: region:18383-18655:1
so has part: feature:18383-18655:1:exon
subclass of: SO_0000010

position:18655:1
position: 18655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18383-18655:1:exon

H3M12_RS12265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12265
old locus tag: H3M12_12265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003558832.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTFDRWIELITLALAVVAGIYAALMVVMKPFTDRLQDIAQSMKDSSQRIERLFDSQNTLREDFITSRSEHKVINKRLDNVEGDVRELKSK
SIO_010081: H3M12_RS12265
subclass of: SO_0000673
so part of: H3M12_RS12265
location: 18383..18655
location: region:18383-18655:1
so has part: feature:18383-18655:1:exon

WP_182151131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18383-18655:1:exon

H3M12_RS12270
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12270
old locus tag: H3M12_12270
so part of: sequence
location: complement(18804..19133)
location: region:18804-19133:-1
so has part: feature:18804-19133:-1:exon
subclass of: SO_0000010

position:18804:-1
position: 18804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19133:-1
position: 19133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18804-19133:-1:exon

H3M12_RS12270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12270
old locus tag: H3M12_12270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004466180.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5388 domain-containing protein
translation: MANKLIRSNRNPIKPDKQAEISDFSNSNKGIKTPQNQVASVTFDTNLKINNHIRNKLQAMAVLGYSDNQKAAIEVALSVYIESLTSDERKELEFQIDSLEKRDVRVKNK
SIO_010081: H3M12_RS12270
subclass of: SO_0000673
so part of: H3M12_RS12270
location: complement(18804..19133)
location: region:18804-19133:-1
so has part: feature:18804-19133:-1:exon

WP_233449253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18804-19133:-1:exon

H3M12_RS12275
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12275
old locus tag: H3M12_12275
so part of: sequence
location: complement(19126..19935)
location: region:19126-19935:-1
so has part: feature:19126-19935:-1:exon
subclass of: SO_0000010

position:19126:-1
position: 19126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19935:-1
position: 19935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19126-19935:-1:exon

H3M12_RS12275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12275
old locus tag: H3M12_12275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010623287.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MTQTITFGNFKGGVGKTSNSTLVALDLSNRGYKTLLVDLDPQGNATNLLLNTKVNIDGKVGHFKKSLMASIEDGDLTQSLIHIKENFDILASAPDFALFPRYMEKIKDYNERVKEFSNLIKPIKDKYDYVIIDTPPTISLITDSALYASDYCVIVMQTHEHSFEGAQAFIEYIQEQVIDTYKAPRLEIVGILAVLLQAGAPVDEATIQNAINQFGTENIFKHKIHSMQRIKRYGITGITFNTQFDRRVFKVYKDVTDEMLKRMEAIENG
SIO_010081: H3M12_RS12275
subclass of: SO_0000673
so part of: H3M12_RS12275
location: complement(19126..19935)
location: region:19126-19935:-1
so has part: feature:19126-19935:-1:exon

WP_015474642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19126-19935:-1:exon

H3M12_RS12960
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12960
pseudo: true
so part of: sequence
location: complement(21404..>21628)
location: region:21404-21628:-1
so has part: feature:21404-21628:-1:exon
subclass of: SO_0000010

position:21404:-1
position: 21404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21628:-1
position: 21628
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21404-21628:-1:exon

H3M12_RS12960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017262788.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transporter
SIO_010081: H3M12_RS12960
subclass of: SO_0000673
so part of: H3M12_RS12960
location: complement(21404..>21628)
location: region:21404-21628:-1
so has part: feature:21404-21628:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21404-21628:-1:exon

H3M12_RS12280
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12280
old locus tag: H3M12_12280
so part of: sequence
location: 21767..22999
location: region:21767-22999:1
so has part: feature:21767-22999:1:exon
subclass of: SO_0000010

position:21767:1
position: 21767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22999:1
position: 22999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21767-22999:1:exon

H3M12_RS12280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12280
old locus tag: H3M12_12280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020089731.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA-guided endonuclease TnpB family protein
translation: MSEFKYHYGIKMRIFPSREQKHQIDNNINASRFAYNEMVAIDKELFQLRKVKCYIASVVNRIAYLQKRKNNTQMLFALHPWLSGTNVGTDVVDQARRAYQSAWRLFRQVHRSGTPKFHKKQMSGSFQLPNRYAKVQPNLFNGSCRFLDSKHVKISLIGRLRVSGSHRRLFSCGNDVRIGTITVSRDATGRYYLSMQLGSDTPFVVGGKQQISPVGIDLNTDNFLTDSNGNIVANPRYYRSIKGKLAKAQRKLSRRALRAKKENRPLREAKNYQKQRVLVATLQRKVANQRNNFLHLVSTTLIKNHDLVVAEELRSKNMLRNHALAMSIADVGWRTFLGMLAYKADLYGHKFVTVNPRNTTQTCSECGYLMHGDEKLTLKDREWTCPQCGNHHIRDWNAAKNILKKGLASA
SIO_010081: H3M12_RS12280
subclass of: SO_0000673
so part of: H3M12_RS12280
location: 21767..22999
location: region:21767-22999:1
so has part: feature:21767-22999:1:exon

WP_182151135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21767-22999:1:exon

H3M12_RS12285
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12285
old locus tag: H3M12_12285
so part of: sequence
location: 23408..24886
location: region:23408-24886:1
so has part: feature:23408-24886:1:exon
subclass of: SO_0000010

position:23408:1
position: 23408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24886:1
position: 24886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23408-24886:1:exon

H3M12_RS12285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12285
old locus tag: H3M12_12285
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRSSFAKSIYLGAAVLGLAGLSAVTTTTASAKSYATAGAYSKLTTDATKRNVEATGTHALYTKPGTVKGAKIVASKATMAKLASSKKSADYFRAYGVKTTNRGSVYYRVVTMDQKYRGYVYGGKVADTFGGGIKAAETTTANTTDSTIGKTVTFTNPGTKHVTWTAPKYTQYKSGASKVVKNTTPFAGDTLKVTKAETKTREGSLYYYVEDQQNPTVNGWIYSKAVTTDASAAYNQASDVKVNFVNPNGTLIAKAPLRNLIENNTDNTGVSKSAVAAHAKGTQVGFDAQKKANNAWGKAALTGTGYVYSSKTASNMSALLGAKTGDTITLTVTKGTQVVQGVSAYYQKGTSITKLVAKSDDSKVDLNYQVTFPTLGSAFAGSKGATYTAADVQNFLTANKADTLNSANYAKDAGGDVVKTSDPSAIGAKGTAIGKQPSTDNPVVVYHTTYTLTSGVAGTYTDGGNASAFYNTAKEVKGSANTTNTGHVSAFS
SIO_010081: H3M12_RS12285
subclass of: SO_0000673
so part of: H3M12_RS12285
location: 23408..24886
location: region:23408-24886:1
so has part: feature:23408-24886:1:exon

WP_182151088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23408-24886:1:exon

H3M12_RS12290
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12290
old locus tag: H3M12_12290
so part of: sequence
location: complement(25057..25368)
location: region:25057-25368:-1
so has part: feature:25057-25368:-1:exon
subclass of: SO_0000010

position:25057:-1
position: 25057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25368:-1
position: 25368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25057-25368:-1:exon

H3M12_RS12290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12290
old locus tag: H3M12_12290
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTFELEEYLEANSQIVDNFRDKYAAFLSEQNADRPTNKKWSSLRIKNETSSAVIKFISNIQAKLSSAMKPRQRKSYDGWVDYMERNETIDNLEESLMDLDFV
SIO_010081: H3M12_RS12290
subclass of: SO_0000673
so part of: H3M12_RS12290
location: complement(25057..25368)
location: region:25057-25368:-1
so has part: feature:25057-25368:-1:exon

WP_182151089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25057-25368:-1:exon

H3M12_RS12295
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12295
old locus tag: H3M12_12295
so part of: sequence
location: complement(25495..26211)
location: region:25495-26211:-1
so has part: feature:25495-26211:-1:exon
subclass of: SO_0000010

position:25495:-1
position: 25495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26211:-1
position: 26211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25495-26211:-1:exon

H3M12_RS12295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12295
old locus tag: H3M12_12295
inference: COORDINATES: protein motif:HMM:NF012920.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XRE family transcriptional regulator
translation: MKPENKISSQIKVLRSKMGWSQSQLADKLGVSKQSVSNWETNLKTPRMGALQKMSDLFGVSIGKITDGDRFENNLIQQTAQLMQGLPYSKQQEVFDFAKSRLTLNANSNVIKFPKDDDTLEITASGVLSAGVGEFLDDSTKPFTVTVHKPVPSNYDYAFQINGHSMEPVYQDKQVVFVKKEDDYRDGQIIAAVMDGCAYLKKLSVVDGEATLVSLNPQYPNIKVDKETGVKVLGVVFS
SIO_010081: H3M12_RS12295
subclass of: SO_0000673
so part of: H3M12_RS12295
location: complement(25495..26211)
location: region:25495-26211:-1
so has part: feature:25495-26211:-1:exon

WP_182151090.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25495-26211:-1:exon

H3M12_RS12300
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12300
old locus tag: H3M12_12300
so part of: sequence
location: 26362..26631
location: region:26362-26631:1
so has part: feature:26362-26631:1:exon
subclass of: SO_0000010

position:26362:1
position: 26362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26631:1
position: 26631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26362-26631:1:exon

H3M12_RS12300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12300
old locus tag: H3M12_12300
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MQATKFRISLKAARINAGLSQRQVAEWFGHYFGKKVSRQWVSYLEANPDDIAPGYGKAFAELYQVPIDMINFAPKSTLSYTTERNEPHE
SIO_010081: H3M12_RS12300
subclass of: SO_0000673
so part of: H3M12_RS12300
location: 26362..26631
location: region:26362-26631:1
so has part: feature:26362-26631:1:exon

WP_182151091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26362-26631:1:exon

H3M12_RS12305
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12305
old locus tag: H3M12_12305
so part of: sequence
location: 26624..27340
location: region:26624-27340:1
so has part: feature:26624-27340:1:exon
subclass of: SO_0000010

position:26624:1
position: 26624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27340:1
position: 27340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26624-27340:1:exon

H3M12_RS12305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12305
old locus tag: H3M12_12305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005724925.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage antirepressor KilAC domain-containing protein
translation: MNELIKVTIKNDQQLVSARDLYKGLEVKTRFSQWVTQNFKVFIEGSDFTSVVGTTVVNNGAKREIQDYAMTVDMAKQVSLMSQTPQGKFYREYFISLEAKWNDPQEVVKRGYAILQNENAQLRIENTELKPKADYTDKMLANPGLETTSVIAKNYGYSAREFNKLLNGLGIQYKQGKTWLLYAKYQDKGYTHVEPYGYTNSDGIDKVRNTMKWTQKGQRFLYDFLESKGIMPKVEQTA
SIO_010081: H3M12_RS12305
subclass of: SO_0000673
so part of: H3M12_RS12305
location: 26624..27340
location: region:26624-27340:1
so has part: feature:26624-27340:1:exon

WP_182151092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26624-27340:1:exon

H3M12_RS12310
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12310
old locus tag: H3M12_12310
so part of: sequence
location: 27357..27557
location: region:27357-27557:1
so has part: feature:27357-27557:1:exon
subclass of: SO_0000010

position:27357:1
position: 27357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27557:1
position: 27557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27357-27557:1:exon

H3M12_RS12310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12310
old locus tag: H3M12_12310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003644550.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNLRKAIIMAQKTGRGIARRSQFPRPIWLIPTNTTEKIIIVADNKFTPRWEPSYEDLIAKDWVVHG
SIO_010081: H3M12_RS12310
subclass of: SO_0000673
so part of: H3M12_RS12310
location: 27357..27557
location: region:27357-27557:1
so has part: feature:27357-27557:1:exon

WP_182151093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27357-27557:1:exon

H3M12_RS12315
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12315
old locus tag: H3M12_12315
so part of: sequence
location: complement(27554..27901)
location: region:27554-27901:-1
so has part: feature:27554-27901:-1:exon
subclass of: SO_0000010

position:27554:-1
position: 27554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27901:-1
position: 27901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27554-27901:-1:exon

H3M12_RS12315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12315
old locus tag: H3M12_12315
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQLDELTNDAKFLLSVMYKQYISDRKSGHTKREAKLFGSETRIHDTLMSEWEQDDVHETINELSRNKLLDVIYGNDEAAIVNLSTNAIVLMEHKFQDKVDLILNYATKIKTLITF
SIO_010081: H3M12_RS12315
subclass of: SO_0000673
so part of: H3M12_RS12315
location: complement(27554..27901)
location: region:27554-27901:-1
so has part: feature:27554-27901:-1:exon

WP_182151094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27554-27901:-1:exon

H3M12_RS12320
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12320
old locus tag: H3M12_12320
so part of: sequence
location: 28113..28316
location: region:28113-28316:1
so has part: feature:28113-28316:1:exon
subclass of: SO_0000010

position:28113:1
position: 28113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28316:1
position: 28316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28113-28316:1:exon

H3M12_RS12320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12320
old locus tag: H3M12_12320
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKINVGDKVSYEDTYAAGIKMVSAGVGKVAELKPDVYGKSNKKIAVIKQRGHEPFEMFTNGLEVVDR
SIO_010081: H3M12_RS12320
subclass of: SO_0000673
so part of: H3M12_RS12320
location: 28113..28316
location: region:28113-28316:1
so has part: feature:28113-28316:1:exon

WP_182151095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28113-28316:1:exon

H3M12_RS12325
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12325
old locus tag: H3M12_12325
so part of: sequence
location: 28426..28686
location: region:28426-28686:1
so has part: feature:28426-28686:1:exon
subclass of: SO_0000010

position:28426:1
position: 28426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28686:1
position: 28686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28426-28686:1:exon

H3M12_RS12325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12325
old locus tag: H3M12_12325
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MALGGTSAEYDRKFAAPVVTHINQTDEEKAALEYNAHVEALETYAMDLQECLEHTTDEKYKWLLAVKLDRTNQRLEQLRTEKSEWN
SIO_010081: H3M12_RS12325
subclass of: SO_0000673
so part of: H3M12_RS12325
location: 28426..28686
location: region:28426-28686:1
so has part: feature:28426-28686:1:exon

WP_182151096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28426-28686:1:exon

H3M12_RS12330
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12330
old locus tag: H3M12_12330
so part of: sequence
location: 28677..28901
location: region:28677-28901:1
so has part: feature:28677-28901:1:exon
subclass of: SO_0000010

position:28677:1
position: 28677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28901:1
position: 28901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28677-28901:1:exon

H3M12_RS12330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12330
old locus tag: H3M12_12330
inference: COORDINATES: protein motif:HMM:NF024835.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MELAEIIGENLRVLMAVKQVTVSKVHQETNISRSTLATIKSGEFKMIQTRILETLANYFEVTVSQLVTPFKEEK
SIO_010081: H3M12_RS12330
subclass of: SO_0000673
so part of: H3M12_RS12330
location: 28677..28901
location: region:28677-28901:1
so has part: feature:28677-28901:1:exon

WP_182151097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28677-28901:1:exon

H3M12_RS12335
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12335
old locus tag: H3M12_12335
so part of: sequence
location: 28901..29443
location: region:28901-29443:1
so has part: feature:28901-29443:1:exon
subclass of: SO_0000010

position:29443:1
position: 29443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28901-29443:1:exon

H3M12_RS12335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12335
old locus tag: H3M12_12335
inference: COORDINATES: protein motif:HMM:NF019000.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: host-nuclease inhibitor Gam family protein
translation: MDALEKYDLENDELVSKPKFEITDLSSATWAMRKYRALAAKDDELKKVALEQKESIDTWLESKLQANQDSRAFFEGLFADYLTKLRKDDPKARIETPFGTVSTRKTPTGVNWSDETVVQSLEKQGLDDLVNIKKTPDKKQIKKQFYFVKGRYVNDEGQIIDGASEKEAVENLVVKPTKEI
SIO_010081: H3M12_RS12335
subclass of: SO_0000673
so part of: H3M12_RS12335
location: 28901..29443
location: region:28901-29443:1
so has part: feature:28901-29443:1:exon

WP_182151098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28901-29443:1:exon

H3M12_RS12340
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12340
old locus tag: H3M12_12340
so part of: sequence
location: 29446..30216
location: region:29446-30216:1
so has part: feature:29446-30216:1:exon
subclass of: SO_0000010

position:29446:1
position: 29446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30216:1
position: 30216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29446-30216:1:exon

H3M12_RS12340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12340
old locus tag: H3M12_12340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003638307.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ERF family protein
translation: MNISEPTENANVLESRSQIEVDYQLKIKLQSAFNKGLSHFRQQVKAPKKNGHVGYKTKSGGKNYDYVLLEDLIKAIDEGLKDTGLAWYQDCETANGVVRVRTIVTHENGYSKSSSWMEFKTSGNPQDAGSAMTYAKRYSLGTTFGVSSEADDDGQQATKAAPSNRTAQQPAHRNNGTQQNNCQPLPVTKQQATTLNGLFEAMSKAASAPIEAVRNGYLEKLNVSQVNDLMHDGANQLISLVTAQLKKQSEKGNSND
SIO_010081: H3M12_RS12340
subclass of: SO_0000673
so part of: H3M12_RS12340
location: 29446..30216
location: region:29446-30216:1
so has part: feature:29446-30216:1:exon

WP_182151099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29446-30216:1:exon

H3M12_RS12345
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
gene: ssb
locus tag: H3M12_RS12345
old locus tag: H3M12_12345
so part of: sequence
location: 30209..30640
location: region:30209-30640:1
so has part: feature:30209-30640:1:exon
subclass of: SO_0000010

position:30209:1
position: 30209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30640:1
position: 30640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30209-30640:1:exon

H3M12_RS12345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
gene: ssb
locus tag: H3M12_RS12345
old locus tag: H3M12_12345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003219228.1
GO function: GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded DNA-binding protein
translation: MINRVVLTGRLTRDVELRYTQGGAAVATFTLAVDRRFTNQQGEREADFVICVIWRKAAEAFANYMHKGSLVGIEGRIQTRNYENKQGQRVYVTEVIVENFSFLEAKNSTGNGSYQNNRPQNNTSDPFANNGEPVDIQDDQLPF
SIO_010081: H3M12_RS12345
subclass of: SO_0000673
so part of: H3M12_RS12345
location: 30209..30640
location: region:30209-30640:1
so has part: feature:30209-30640:1:exon

WP_182151100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30209-30640:1:exon

H3M12_RS12350
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12350
old locus tag: H3M12_12350
so part of: sequence
location: 30655..31371
location: region:30655-31371:1
so has part: feature:30655-31371:1:exon
subclass of: SO_0000010

position:30655:1
position: 30655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31371:1
position: 31371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30655-31371:1:exon

H3M12_RS12350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12350
old locus tag: H3M12_12350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002831826.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative HNHc nuclease
translation: MQRSRSKYFERNGKPYLLVELDHQPNLEHIETVSGSRDQLYLDWELADTRKARPQQRRLFFALLNDIADYFVVPQEFLKAMFYGQYREYTNGNEISLSDTTESSVSDANVLLDLVIDFMFTWRVPFKQGYELLPREQEYYQYQCCRHRRCMVCGREHSDINHVDTVGSGRDRNHLDHTQLRVNCLCREHHTEWHKIGPTAFGEKYHIPVAGIRLDEETLRKIGVRGNYRGETNGKSIN
SIO_010081: H3M12_RS12350
subclass of: SO_0000673
so part of: H3M12_RS12350
location: 30655..31371
location: region:30655-31371:1
so has part: feature:30655-31371:1:exon

WP_182151101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30655-31371:1:exon

H3M12_RS12355
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12355
old locus tag: H3M12_12355
so part of: sequence
location: 31352..32098
location: region:31352-32098:1
so has part: feature:31352-32098:1:exon
subclass of: SO_0000010

position:31352:1
position: 31352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32098:1
position: 32098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31352-32098:1:exon

H3M12_RS12355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12355
old locus tag: H3M12_12355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001037655.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication protein
translation: MGNLLISEPPLQVLPSLAVKVGLNEAIVLQQFHYWLQRSNNIRDGYKWIYNSFPNWNKQFPFWGLNTLKRAVTGLEKDGYLITANYNKAGFDRTKWYRIDYSKLDMSRPSTQNGSTNGPKWVDGTAQNGSTNTNRLPETTTETTKENSAAVAAHSSIESDFEEIWSAYPNKKGKKQAFNHYKAWRKKSAKHSNDYLFNQLKLYKQYIAQNKDWYRPMDGSTWFNGRFDDEYQASTEPKHEGREYWTGG
SIO_010081: H3M12_RS12355
subclass of: SO_0000673
so part of: H3M12_RS12355
location: 31352..32098
location: region:31352-32098:1
so has part: feature:31352-32098:1:exon

WP_233449254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31352-32098:1:exon

H3M12_RS12360
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12360
old locus tag: H3M12_12360
so part of: sequence
location: 32100..32870
location: region:32100-32870:1
so has part: feature:32100-32870:1:exon
subclass of: SO_0000010

position:32100:1
position: 32100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32870:1
position: 32870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32100-32870:1:exon

H3M12_RS12360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12360
old locus tag: H3M12_12360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016058311.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MEHVTFDKRYIQQLANAHHVDLNHLPTKEELDRKTAEQATQQLKRDKMARYYSYSVWSGNIPLKFSFGNWDIAKQDNPHLAKSLGKKAFVLAKQLENQNFNVAMMGDRGVGKTSLALAMLDHLMSHGRSGMFVSTAELLRMVNDKYEDTSVRSKLLNITRSMIEVDVLVLDDFGTEGGMTGNIKPVHKDLQDIMYRVSNARVDFNHNTAKGITIITTNNTKGQLKQMYEGKFIDRVYPDNPEQQLIFDGMKGVRNV
SIO_010081: H3M12_RS12360
subclass of: SO_0000673
so part of: H3M12_RS12360
location: 32100..32870
location: region:32100-32870:1
so has part: feature:32100-32870:1:exon

WP_182151103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32100-32870:1:exon

H3M12_RS12365
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12365
old locus tag: H3M12_12365
so part of: sequence
location: 33041..33451
location: region:33041-33451:1
so has part: feature:33041-33451:1:exon
subclass of: SO_0000010

position:33041:1
position: 33041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33451:1
position: 33451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33041-33451:1:exon

H3M12_RS12365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12365
old locus tag: H3M12_12365
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSNKKMAAAIRSAYANYGDDPDDWPEDVKQEIHGQYEEEHTAENNILRHMILHGYTSQYIAQERSRSLQYIWHLRGRMKKRDELDYQATPDELTQLKYNLDHMNKPNNKGIASAMGRDKDWVRCMRVKLREAEHE
SIO_010081: H3M12_RS12365
subclass of: SO_0000673
so part of: H3M12_RS12365
location: 33041..33451
location: region:33041-33451:1
so has part: feature:33041-33451:1:exon

WP_182151104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33041-33451:1:exon

H3M12_RS12370
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12370
old locus tag: H3M12_12370
so part of: sequence
location: 33444..33890
location: region:33444-33890:1
so has part: feature:33444-33890:1:exon
subclass of: SO_0000010

position:33444:1
position: 33444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33890:1
position: 33890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33444-33890:1:exon

H3M12_RS12370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12370
old locus tag: H3M12_12370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015380172.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO process: GO:0032775 - DNA methylation on adenine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA N-6-adenine-methyltransferase
translation: MNNALLSSEKNYWETPQDFFKKLNEKYYFSFDLAASSENTKCENFFSEEDNSLTKAWHELKGNLFLNPPYGRELRKWVKKAYEESLKKHDGYIVLLIPARTDTSYWHDFIFGKAQINFLRGRLKFELHGESKDAAPFPSAVVIYGGRQ
SIO_010081: H3M12_RS12370
subclass of: SO_0000673
so part of: H3M12_RS12370
location: 33444..33890
location: region:33444-33890:1
so has part: feature:33444-33890:1:exon

WP_182151105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33444-33890:1:exon

H3M12_RS12375
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12375
old locus tag: H3M12_12375
so part of: sequence
location: 34056..34247
location: region:34056-34247:1
so has part: feature:34056-34247:1:exon
subclass of: SO_0000010

position:34056:1
position: 34056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34247:1
position: 34247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34056-34247:1:exon

H3M12_RS12375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12375
old locus tag: H3M12_12375
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTHEQIEYRKYVLQGMKSYGGDVAQALVWCGNHFIKLSNSQRNAINKLSAKERNQVIHELTMM
SIO_010081: H3M12_RS12375
subclass of: SO_0000673
so part of: H3M12_RS12375
location: 34056..34247
location: region:34056-34247:1
so has part: feature:34056-34247:1:exon

WP_182151106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34056-34247:1:exon

H3M12_RS12380
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12380
old locus tag: H3M12_12380
so part of: sequence
location: 34256..34471
location: region:34256-34471:1
so has part: feature:34256-34471:1:exon
subclass of: SO_0000010

position:34256:1
position: 34256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34471:1
position: 34471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34256-34471:1:exon

H3M12_RS12380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12380
old locus tag: H3M12_12380
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDKTRDAMNGNQRMLLRYLEALVLKDDVLMGLAEFQSRLSEHSVPKEVYIALGMLSNAEITNVLHELTRPF
SIO_010081: H3M12_RS12380
subclass of: SO_0000673
so part of: H3M12_RS12380
location: 34256..34471
location: region:34256-34471:1
so has part: feature:34256-34471:1:exon

WP_182151107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34256-34471:1:exon

H3M12_RS12385
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12385
old locus tag: H3M12_12385
so part of: sequence
location: 34484..34909
location: region:34484-34909:1
so has part: feature:34484-34909:1:exon
subclass of: SO_0000010

position:34484:1
position: 34484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34909:1
position: 34909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34484-34909:1:exon

H3M12_RS12385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12385
old locus tag: H3M12_12385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003644538.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator
translation: MKRSTIRTVEDILRDYPKIDKYIEQREQELRYPVTPVDENVGGGRAQNGFNDSTERLIITLDEDKRINALKKQRQVIDDCLDEVGPDTQAIIDEQYFRKYPRYTLTGMVENNMLSVGKSRAYKLKNLFIKKCAKGLGLYDL
SIO_010081: H3M12_RS12385
subclass of: SO_0000673
so part of: H3M12_RS12385
location: 34484..34909
location: region:34484-34909:1
so has part: feature:34484-34909:1:exon

WP_182151108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34484-34909:1:exon

H3M12_RS12390
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12390
old locus tag: H3M12_12390
so part of: sequence
location: 34983..35040
location: region:34983-35040:1
so has part: feature:34983-35040:1:exon
subclass of: SO_0000663

position:34983:1
position: 34983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35040:1
position: 35040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34983-35040:1:exon

H3M12_RS12390
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2292255
locus tag: H3M12_RS12390
old locus tag: H3M12_12390
product: tRNA-OTHER
inference: COORDINATES: profile:tRNAscan-SE:2.0.9
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
SIO_010081: H3M12_RS12390
subclass of: SO_0000673
so part of: H3M12_RS12390
location: 34983..35040
location: region:34983-35040:1
so has part: feature:34983-35040:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34983-35040:1:exon

H3M12_RS12395
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12395
old locus tag: H3M12_12395
so part of: sequence
location: 35051..35124
location: region:35051-35124:1
so has part: feature:35051-35124:1:exon
subclass of: SO_0000663

position:35051:1
position: 35051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35124:1
position: 35124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35051-35124:1:exon

H3M12_RS12395
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 2292255
locus tag: H3M12_RS12395
old locus tag: H3M12_12395
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.9
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:35085..35087,aa:Ile,seq:cat)
SIO_010081: H3M12_RS12395
subclass of: SO_0000673
so part of: H3M12_RS12395
location: 35051..35124
location: region:35051-35124:1
so has part: feature:35051-35124:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35051-35124:1:exon

H3M12_RS12400
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12400
old locus tag: H3M12_12400
so part of: sequence
location: 35380..36195
location: region:35380-36195:1
so has part: feature:35380-36195:1:exon
subclass of: SO_0000010

position:35380:1
position: 35380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36195:1
position: 36195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35380-36195:1:exon

H3M12_RS12400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12400
old locus tag: H3M12_12400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005716170.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKSQELLSMIEHPEYFTHAEKISMEEKIRQKKLGTKEVSTAMIDTAKSEGKALVLDALNGKWGDLIFDVAETGDHLKTKLDDMKKVMLLAEYLQKVDDQEQGLLKLTDLITDPYGLSIYSKIISILSDSPADDDLLSLMSDYLKKLTEEDRLSEIFSKAKSILNLIDKSSPQALILLRNARDWPLVPNPGNVVTFNGRVQGDNTKLVASTFVKIPQFKKYSIVSLQMAIFDLETNGLAEFVSGTLQNDRQKNIYCEQLTATGNMLLESIQ
SIO_010081: H3M12_RS12400
subclass of: SO_0000673
so part of: H3M12_RS12400
location: 35380..36195
location: region:35380-36195:1
so has part: feature:35380-36195:1:exon

WP_182151109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35380-36195:1:exon

H3M12_RS12405
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12405
old locus tag: H3M12_12405
so part of: sequence
location: 36352..36519
location: region:36352-36519:1
so has part: feature:36352-36519:1:exon
subclass of: SO_0000010

position:36352:1
position: 36352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36519:1
position: 36519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36352-36519:1:exon

H3M12_RS12405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12405
old locus tag: H3M12_12405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013355638.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRHTEYGYVSPAENHCYHDLERWLADKKKRERRAKKHGAFKLHKGGDAHAKSKTL
SIO_010081: H3M12_RS12405
subclass of: SO_0000673
so part of: H3M12_RS12405
location: 36352..36519
location: region:36352-36519:1
so has part: feature:36352-36519:1:exon

WP_182151110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36352-36519:1:exon

H3M12_RS12410
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12410
old locus tag: H3M12_12410
so part of: sequence
location: 36539..37006
location: region:36539-37006:1
so has part: feature:36539-37006:1:exon
subclass of: SO_0000010

position:36539:1
position: 36539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37006:1
position: 37006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36539-37006:1:exon

H3M12_RS12410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12410
old locus tag: H3M12_12410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010623267.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HNH endonuclease signature motif containing protein
translation: MVKFPDHYCKQHYEHEAEYLASRERWARSHDKHYTHKYNTVTRNRDDTKRKQYNFYRTRQWSHLRQQVLERDHYLCAYCRVQGIITPAKTVDHLRPIEAFPNDKANINNLVVICRQCHALKTQFEQKYYGCGKENTPTGNKPVDDIKAISRMMRS
SIO_010081: H3M12_RS12410
subclass of: SO_0000673
so part of: H3M12_RS12410
location: 36539..37006
location: region:36539-37006:1
so has part: feature:36539-37006:1:exon

WP_182151136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36539-37006:1:exon

H3M12_RS12415
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12415
old locus tag: H3M12_12415
so part of: sequence
location: 37006..37551
location: region:37006-37551:1
so has part: feature:37006-37551:1:exon
subclass of: SO_0000010

position:37551:1
position: 37551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37006-37551:1:exon

H3M12_RS12415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12415
old locus tag: H3M12_12415
inference: COORDINATES: protein motif:HMM:NF019106.2
GO function: GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NUMOD4 domain-containing protein
translation: MEEVWKPVKGYEGYYEVSCFGNVRSVERYDTMGRKKHGMMLSGCNNGNGYLSVQLAKDGCKKRKYIHRLVAESFVNRVENNNEVNHKDENTLNNRADNLEWCNRKYNCNYGNHNNKMSESKGSKFVVTNNVTGTKMLFNSKDVASKVLKIGYKKIVQGIKDGRISYLFRQKKRDFSFKVIQ
SIO_010081: H3M12_RS12415
subclass of: SO_0000673
so part of: H3M12_RS12415
location: 37006..37551
location: region:37006-37551:1
so has part: feature:37006-37551:1:exon

WP_182151111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37006-37551:1:exon

H3M12_RS12420
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12420
old locus tag: H3M12_12420
so part of: sequence
location: 37767..38225
location: region:37767-38225:1
so has part: feature:37767-38225:1:exon
subclass of: SO_0000010

position:37767:1
position: 37767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38225:1
position: 38225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37767-38225:1:exon

H3M12_RS12420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12420
old locus tag: H3M12_12420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002833133.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage terminase small subunit P27 family
translation: MKKADKDVNNGQLTRTPPAYLGRQAKVVWRRLVPFLEDSTPVKRIDSGLVEQYASQYEIYRNAYKHIQKHGEVQAIYKTLQDQTGQKIGQDFVGYKRNPMTQIYDSAVKNLTKLGAELGLSPKSRSDLLKLNLDDHKDERSISDRMKEFLGG
SIO_010081: H3M12_RS12420
subclass of: SO_0000673
so part of: H3M12_RS12420
location: 37767..38225
location: region:37767-38225:1
so has part: feature:37767-38225:1:exon

WP_182151112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37767-38225:1:exon

H3M12_RS12425
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12425
old locus tag: H3M12_12425
so part of: sequence
location: 38451..38972
location: region:38451-38972:1
so has part: feature:38451-38972:1:exon
subclass of: SO_0000010

position:38451:1
position: 38451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38972:1
position: 38972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38451-38972:1:exon

H3M12_RS12425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12425
old locus tag: H3M12_12425
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPKKKSHDEVVSQIFSIVGNEYTVLSRYTKASNPIKIRHNTCGFVYETRTSNFISQGCRCPKCAGKLQYTNQSFKEKIFSIFGNEYTVLGNYKNTKTKIKIRHNVCGFVIDITPLNFLRRRSCPYCSGKFLNQTMFSKIISQTVDAKEYIFLEKYKGTNTSIFKSSATMITNP
SIO_010081: H3M12_RS12425
subclass of: SO_0000673
so part of: H3M12_RS12425
location: 38451..38972
location: region:38451-38972:1
so has part: feature:38451-38972:1:exon

WP_182151113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38451-38972:1:exon

H3M12_RS12430
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12430
old locus tag: H3M12_12430
so part of: sequence
location: complement(38988..40004)
location: region:38988-40004:-1
so has part: feature:38988-40004:-1:exon
subclass of: SO_0000010

position:38988:-1
position: 38988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40004:-1
position: 40004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38988-40004:-1:exon

H3M12_RS12430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12430
old locus tag: H3M12_12430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011674571.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MTHSQINTHKHYQQLSLSDRATIQALRATGDTATVIAQKLHRSKATISREITRGSVTQLDSKRHSHQVYLAETAQAIHDRKRDRTGHHAFLKTGRAFFKALTKELTRKPRVHSVDSFVHFYRDQGKSCPSTTTVYRYIDAGLLELDNMTLPKKLRRRVKGYKNAHKRKNKKIYGDSIELRPAAVNDRTGVGHWEGDLVKGIRSADEPALMTLTERYSRTEIIVKIPDYHADTCLKALQDTINDYGAKEFESITFDNGSEFAKLSEIVGTQIYFAHPYSPWERGTNENTNGLLREYFPKGKSLRDVTLVEIQAVQSALNHRPRRILNYLRPCDYYRRMA
SIO_010081: H3M12_RS12430
subclass of: SO_0000673
so part of: H3M12_RS12430
location: complement(38988..40004)
location: region:38988-40004:-1
so has part: feature:38988-40004:-1:exon

WP_096109476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38988-40004:-1:exon

H3M12_RS12435
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12435
old locus tag: H3M12_12435
so part of: sequence
location: 40181..40534
location: region:40181-40534:1
so has part: feature:40181-40534:1:exon
subclass of: SO_0000010

position:40181:1
position: 40181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40534:1
position: 40534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40181-40534:1:exon

H3M12_RS12435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12435
old locus tag: H3M12_12435
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: DUF559 domain-containing protein
translation: MTGRRCPFCKESHGEHEIEMWLSNKNVNHIRQKKFENCRFKKELPFDFYLPDSNVCIEYDGEQHFKKVDLFGGEKGLVIRRLRDNVKNEFCKKQGIKLLRIKYNENIKDVLNKSIEI
SIO_010081: H3M12_RS12435
subclass of: SO_0000673
so part of: H3M12_RS12435
location: 40181..40534
location: region:40181-40534:1
so has part: feature:40181-40534:1:exon

WP_182151114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40181-40534:1:exon

H3M12_RS12440
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12440
old locus tag: H3M12_12440
pseudo: true
so part of: sequence
location: 40570..42477
location: region:40570-42477:1
so has part: feature:40570-42477:1:exon
subclass of: SO_0000010

position:40570:1
position: 40570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42477:1
position: 42477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40570-42477:1:exon

H3M12_RS12440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12440
old locus tag: H3M12_12440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015380484.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: terminase large subunit
SIO_010081: H3M12_RS12440
subclass of: SO_0000673
so part of: H3M12_RS12440
location: 40570..42477
location: region:40570-42477:1
so has part: feature:40570-42477:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40570-42477:1:exon