Levilactobacillus suantsaii strain CBA3634 plasmid pCBA3634-01, complete sequence.
type: Entry
definition: Levilactobacillus suantsaii strain CBA3634 plasmid pCBA3634-01, complete sequence.
sequence version: NZ_CP059604.1
sequence date: 2022-12-08
sequence: sequence
division: CON
label: NZ_CP059604.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN15659520
keyword: RefSeq
source: Levilactobacillus suantsaii
organism: Levilactobacillus suantsaii
taxonomy: Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Levilactobacillus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP059604.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: DEC-2019\nAssembly Method :: HGAP v. 3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 273.0x\nSequencing Technology :: PacBio RSII; Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/08/2022 06:34:17\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,568\nCDSs (total) :: 2,477\nGenes (coding) :: 2,405\nCDSs (with protein) :: 2,405\nGenes (RNA) :: 91\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 70\nncRNAs :: 3\nPseudo Genes (total) :: 72\nCDSs (without protein) :: 72\nPseudo Genes (ambiguous residues) :: 0 of 72\nPseudo Genes (frameshifted) :: 36 of 72\nPseudo Genes (incomplete) :: 21 of 72\nPseudo Genes (internal stop) :: 23 of 72\nPseudo Genes (multiple problems) :: 8 of 72\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 42774
topology: circular
so has quality: SO_0000988
location: 1..42774
location: region:1-42774:1
RO_0002162: 2292255

NZ_CP059604
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN15659520
type: BioSample
SIO_000068: biosample

1
title: Culture-independent analysis of the bacterial communities in Chinese fermented vegetables and genomic analysis of lactic acid bacteria
author: Roh, S.W.
author: Song, H.S.
journal: Unpublished

2
title: Direct Submission
author: Roh, S.W.
author: Song, H.S.
journal: Submitted (28-JUL-2020) Microbiology and Functionality Research Group, World Institute of Kimchi, 86, Kimchi-ro, Nam-gu, Gwangju, Gwangju 61755, South Korea

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42774:1
position: 42774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-42774:1:source
so part of: sequence
organism: Levilactobacillus suantsaii
mol type: genomic DNA
strain: CBA3634
plasmid: pCBA3634-01
country: South Korea
collection date: 2019-07

2292255
type: Taxonomy
SIO_000068: taxonomy

H3M12_RS11935
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS11935
old locus tag: H3M12_11935
so part of: sequence
location: join(42117..42774,1..1112)
location: region:1-42774:1
so has part: feature:42117-42774:1:exon
so has part: feature:1-1112:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:42117-42774:1:exon

position:42117:1
position: 42117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-1112:1:exon

position:1112:1
position: 1112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

H3M12_RS11935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS11935
old locus tag: H3M12_11935
EC number: 4.2.1.53
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019803487.1
GO function: GO:0071949 - FAD binding [Evidence IEA]; GO:0050151 - oleate hydratase activity [Evidence IEA]
GO process: GO:0006631 - fatty acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oleate hydratase
translation: MYYSSGNYEAFARPKKPANATKKSAYIVGAGLAGLAAAAFLVRDGQVPGNQIHVFEELGLPGGSMDGILNEQRGYIIRGGREMEPHFETLWDLFRSIPTLEDASVSVLDEFYWLNKADPSNSHTRVIEKRGNQLASDGQLTLSRKAIEEIAKLVLTPENQLDNVKINQVFSDDFFKSNFWLYWSTMFAFEPWASAMEMRRYLLRFVHHVGTLQNMSALKFTKYNQYESLIKPLIKYLEDHDVKFQYNTTVDNIIVEQTGEQKQAVKIELTIDGNQQSLDLTPDDLVFITNGSITESTTYGDNEHSAPATHPIGASWKLWEKLAAQDSAFGHPAKFYQDIPAANWVMSATCTFKDDRIVPYIQKITGKDPYSGSIVTSGPVSIRDSNWLLGISISRQPHFQQQKPNELIVWLYGLFSDQPGNYIHKKITDCSGAEICQEFLYHIGVPENQIAEIAQTANSIPIHMPYITSYFMPRQAGDRPLVVPEGSSNLAFIGNFAETERDTVFTTEYSVRTAMEAVYRLLDIDRGIPEVFDSAFDLRTILSALYYLNDKKSLTELPLNQIEKIGLNAFLKKVHGTYLEEILKSQKLL
SIO_010081: H3M12_RS11935
subclass of: SO_0000673
so part of: H3M12_RS11935
location: join(42117..42774,1..1112)
location: region:1-42774:1
so has part: feature:42117-42774:1:exon
so has part: feature:1-1112:1:exon

WP_021356718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42117-42774:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-1112:1:exon

H3M12_RS11940
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS11940
old locus tag: H3M12_11940
so part of: sequence
location: 1132..1326
location: region:1132-1326:1
so has part: feature:1132-1326:1:exon
subclass of: SO_0000010

position:1132:1
position: 1132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1326:1
position: 1326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1132-1326:1:exon

H3M12_RS11940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS11940
old locus tag: H3M12_11940
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKQHLILISIALATGVVIGKYLKPQKDSFCRHRLGCCSKNSQISKTDPVYLRETQTLGHGLTK
SIO_010081: H3M12_RS11940
subclass of: SO_0000673
so part of: H3M12_RS11940
location: 1132..1326
location: region:1132-1326:1
so has part: feature:1132-1326:1:exon

WP_182151075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1132-1326:1:exon

H3M12_RS11945
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS11945
old locus tag: H3M12_11945
so part of: sequence
location: complement(1408..1950)
location: region:1408-1950:-1
so has part: feature:1408-1950:-1:exon
subclass of: SO_0000010

position:1408:-1
position: 1408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1950:-1
position: 1950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1408-1950:-1:exon

H3M12_RS11945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS11945
old locus tag: H3M12_11945
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002834008.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MDKRIVRTQAKAEKALFELMQEQDFSEISITDIANQAKISRMAFYRNYNSKEDILNKFIQKEYATFVDDITTHHFKELEQLLEVYFDYFKNNPAVLSAIVSASIEGFALRKQSDYLLDFFKMRIKNQQPAPIEIAYYSGAIFASLLYWRENDYQYSAAELAEHLAEKIKNDLLQTGEKIF
SIO_010081: H3M12_RS11945
subclass of: SO_0000673
so part of: H3M12_RS11945
location: complement(1408..1950)
location: region:1408-1950:-1
so has part: feature:1408-1950:-1:exon

WP_182151076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1408-1950:-1:exon

H3M12_RS11950
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS11950
old locus tag: H3M12_11950
so part of: sequence
location: complement(2382..2966)
location: region:2382-2966:-1
so has part: feature:2382-2966:-1:exon
subclass of: SO_0000010

position:2382:-1
position: 2382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2966:-1
position: 2966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2382-2966:-1:exon

H3M12_RS11950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS11950
old locus tag: H3M12_11950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014567995.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MAKIGYARVSSKEQHLDRQLAALKGVDKLFTDKLSGANINRPELQKMLAYIREGDIVLVTELDRLGRNNHDLTKIMNSIQNKGATLDVLNLPSMTGIADPNLRQLMTNLIIELYKYQAESERKRIIERQQQGIALAKQQGKYHGRKPQYVKDDPRLQHAFKLYQAGMSDVDVSRNTGIKRTTFIRYRKKFDIKR
SIO_010081: H3M12_RS11950
subclass of: SO_0000673
so part of: H3M12_RS11950
location: complement(2382..2966)
location: region:2382-2966:-1
so has part: feature:2382-2966:-1:exon

WP_182151077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2382-2966:-1:exon

H3M12_RS12955
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12955
so part of: sequence
location: complement(3073..3408)
location: region:3073-3408:-1
so has part: feature:3073-3408:-1:exon
subclass of: SO_0000010

position:3073:-1
position: 3073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3408:-1
position: 3408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3073-3408:-1:exon

H3M12_RS12955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12955
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQIDKLTLKDVATTNRQYLETIFALGDGHMGVRDSVPFTGNQQATLPVMLINGYYATNPITYGESAYQEAPLHSNFTAPEDLSKMVNGNQNVINSRLNTDNLGKGEFFLFQ
SIO_010081: H3M12_RS12955
subclass of: SO_0000673
so part of: H3M12_RS12955
location: complement(3073..3408)
location: region:3073-3408:-1
so has part: feature:3073-3408:-1:exon

WP_233449248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3073-3408:-1:exon

H3M12_RS11960
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS11960
old locus tag: H3M12_11960
so part of: sequence
location: complement(3656..4633)
location: region:3656-4633:-1
so has part: feature:3656-4633:-1:exon
subclass of: SO_0000010

position:3656:-1
position: 3656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4633:-1
position: 4633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3656-4633:-1:exon

H3M12_RS11960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS11960
old locus tag: H3M12_11960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011102207.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LacI family DNA-binding transcriptional regulator
translation: MKPTIKDIAAKTGFSIATVSRVLAKKQGTYSDKTQERILKVAKDLGYRKNTLAMELVKKKTDVIAVIVNVTPTNFSSGIIDGIQQRATEIGLQVIILYAGNRNTELQHQAIVTALERTVSGILLMAIDPDKADLQLLTESKTPFCFVSINLADERVKSVSSDNYQAAYLATKYLISHGHRTIGLAGIDHYHTGSQRLAGYQAALKDYSIHGQAEWVQPGDYSYQAGYNVFNAYQELGITGVVAASDMTAAGLQKAAQESNVKLPGALSVVSIDGTLICDIATPALTSVTQNFVQIGIESVNCLVGKSATRLVPVTLVERESVTTI
SIO_010081: H3M12_RS11960
subclass of: SO_0000673
so part of: H3M12_RS11960
location: complement(3656..4633)
location: region:3656-4633:-1
so has part: feature:3656-4633:-1:exon

WP_182083332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3656-4633:-1:exon

H3M12_RS11965
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS11965
old locus tag: H3M12_11965
pseudo: true
so part of: sequence
location: 4802..6210
location: region:4802-6210:1
so has part: feature:4802-6210:1:exon
subclass of: SO_0000010

position:4802:1
position: 4802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6210:1
position: 6210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4802-6210:1:exon

H3M12_RS11965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS11965
old locus tag: H3M12_11965
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003645671.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: SLC45 family MFS transporter
SIO_010081: H3M12_RS11965
subclass of: SO_0000673
so part of: H3M12_RS11965
location: 4802..6210
location: region:4802-6210:1
so has part: feature:4802-6210:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4802-6210:1:exon

H3M12_RS11970
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS11970
old locus tag: H3M12_11970
so part of: sequence
location: 6241..8541
location: region:6241-8541:1
so has part: feature:6241-8541:1:exon
subclass of: SO_0000010

position:6241:1
position: 6241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8541:1
position: 8541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6241-8541:1:exon

H3M12_RS11970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS11970
old locus tag: H3M12_11970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003645670.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycoside hydrolase family 31 protein
translation: MSALPSYTQNGQTITFAFTQPLQLTIVTPEIIRVFINRGEQGDSYAIEGHKIQATDFTIESAGDHYIIRTSALTIHLDSERHLDTFDKDGNALITDYRGERIHLKGVDKVHERLVEAEGHSVTKAPTKSDQGYYEIIKSLAPDEYFYGLGDKTGYLNKRGFAYDNWNVDNPAPQLEILPNIYKSIPVILGLKNGHPYGIFFDNTYKSHLDMGKESNHYYFYSAVQGNLDYYIIGGTTLKDIVTNYTYLTGRTPLPQKWTLGYQQSRWGYSASQEEVQAIADNLAKYDLPCDAIHFDVDYMDGYRVFTWDKDKYQGNPKKFITKLNQQGLKVIPIIDPGVKQDSDYHIYAEGLKKGYFVKSADGDVYINKVWPGNAAFPDFGRPEVRQWWANNGKFLTDLGVAGIWIDMNEPATFEGPIPDDVVFNDQDTPSTHKKMHNVYGHNMAKATYTGLKEQTGNRPFVITRAAYAGTQKYSTVWTGDNRSMWPHIQMMIPQLCNLGLSGFSFTGTDIGGFASDTTSELLTRWIEGAIFSPLLRNHAALGTRQQEPWAFGEPTLNIYRKYLKLRYRLIPYLYDLFAKETKTGLPIMRPVVLNYDQDPRVRDLNDEYMVGDDILVAPVVQKSQFKRLVYLPAGNWVDFWNGAEYAGNQDIVVDTPLDKLPLFVKQNTILPWGPAVSHISDEPLKAMTFRVFGTQGTYQHYQDNGRDFKYQSGEWNNYTITVDHNKVNVQLTHHGYQPVYQQITVELSDHVVKLTYDNDSSCYRE
SIO_010081: H3M12_RS11970
subclass of: SO_0000673
so part of: H3M12_RS11970
location: 6241..8541
location: region:6241-8541:1
so has part: feature:6241-8541:1:exon

WP_182083330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6241-8541:1:exon

H3M12_RS11975
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS11975
old locus tag: H3M12_11975
pseudo: true
so part of: sequence
location: 8664..>8774
location: region:8664-8774:1
so has part: feature:8664-8774:1:exon
subclass of: SO_0000010

position:8664:1
position: 8664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8774:1
position: 8774
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8664-8774:1:exon

H3M12_RS11975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS11975
old locus tag: H3M12_11975
inference: COORDINATES: similar to AA sequence:RefSeq:WP_053338758.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
SIO_010081: H3M12_RS11975
subclass of: SO_0000673
so part of: H3M12_RS11975
location: 8664..>8774
location: region:8664-8774:1
so has part: feature:8664-8774:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8664-8774:1:exon

H3M12_RS11980
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS11980
old locus tag: H3M12_11980
so part of: sequence
location: complement(8785..9584)
location: region:8785-9584:-1
so has part: feature:8785-9584:-1:exon
subclass of: SO_0000010

position:8785:-1
position: 8785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9584:-1
position: 9584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8785-9584:-1:exon

H3M12_RS11980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS11980
old locus tag: H3M12_11980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013727908.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MQHFSHHYQSDISRQQFDLIRQDLEASRKRTHPKHIDPYDIFCAMLYVLKNGCTWRDLPADFPKWSTVYYYWMNWSKAPTPDKPALLTQVLKKLSLNRRLRQGRSARTSFVILDAQSIKNTATAENKGYDGGKKISGIKRHLAVDINGFPQAIHITRANITDRDGAIALVTLNLEQFKLVRTMMVDSGYTGQNFANEISSLTSAKVIVVKRNELHQFSVIPQRWLIERSFSWLGNYHRLWRNCERKLNTSLMMVSLAFIRLLLKRY
SIO_010081: H3M12_RS11980
subclass of: SO_0000673
so part of: H3M12_RS11980
location: complement(join(8785..9296,9296..9584))
location: region:8785-9584:-1
so has part: feature:9296-9584:-1:exon
so has part: feature:8785-9296:-1:exon

WP_099046409.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9296-9584:-1:exon

position:9296:-1
position: 9296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8785-9296:-1:exon

H3M12_RS11985
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS11985
old locus tag: H3M12_11985
pseudo: true
so part of: sequence
location: <9653..>10180
location: region:9653-10180:1
so has part: feature:9653-10180:1:exon
subclass of: SO_0000010

position:9653:1
position: 9653
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:10180:1
position: 10180
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9653-10180:1:exon

H3M12_RS11985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS11985
old locus tag: H3M12_11985
inference: COORDINATES: similar to AA sequence:RefSeq:WP_053338758.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS30 family transposase
SIO_010081: H3M12_RS11985
subclass of: SO_0000673
so part of: H3M12_RS11985
location: <9653..>10180
location: region:9653-10180:1
so has part: feature:9653-10180:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9653-10180:1:exon

H3M12_RS11995
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS11995
old locus tag: H3M12_11995
pseudo: true
so part of: sequence
location: <10177..11173
location: region:10177-11173:1
so has part: feature:10177-11173:1:exon
subclass of: SO_0000010

position:10177:1
position: 10177
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:11173:1
position: 11173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10177-11173:1:exon

H3M12_RS11995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS11995
old locus tag: H3M12_11995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_041092043.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: H3M12_RS11995
subclass of: SO_0000673
so part of: H3M12_RS11995
location: <10177..11173
location: region:10177-11173:1
so has part: feature:10177-11173:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10177-11173:1:exon

H3M12_RS12000
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12000
old locus tag: H3M12_12000
so part of: sequence
location: complement(11549..12994)
location: region:11549-12994:-1
so has part: feature:11549-12994:-1:exon
subclass of: SO_0000010

position:11549:-1
position: 11549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12994:-1
position: 12994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11549-12994:-1:exon

H3M12_RS12000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12000
old locus tag: H3M12_12000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004166596.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oligosaccharide flippase family protein
translation: MGTFTLKIIKNYLYNTAYQLFAIIVPLITTPYITRTLGSTGVGVYAYTNSVIQYFVLFGSIGISMYGNRLIAFDRDNNEKLSEDFWSLVVIRTVTIVIAYVAFIVYLVFVGEYRNEYLYQSIQIVAVIFDISWLFMGLEDFKRTVLRSFIVKLFSTIAIFVFVRDPSSVGVYILILSVSTLLGNILLWSYIKSFVISPRGLTLTFNKHILGSLKLFVPQISMQVYLVLNKTMLGSIDGVKSAGFYENSDKIIKISLTVITAIVTVMMPRMANTFAKKKFDQLHNYLYQTLDFVSFASILLAAGLAAVAPTFSIWFMGESFSETGRLIPVLALIGPMIAWSTVLGSQFLVMTRREHQFTISVTVGAIINVLANILLIKNQGTMGAVIATVLAETCVTLIDLFFVSKAIPNFSGLSGKWKYILAGAMTFGIIRCINYKLPGTFVSLLFQGVICVIVYFAICVATSSSFTNTIIRTIKQRKATN
SIO_010081: H3M12_RS12000
subclass of: SO_0000673
so part of: H3M12_RS12000
location: complement(11549..12994)
location: region:11549-12994:-1
so has part: feature:11549-12994:-1:exon

WP_233449249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11549-12994:-1:exon

H3M12_RS12005
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12005
old locus tag: H3M12_12005
so part of: sequence
location: 13139..14155
location: region:13139-14155:1
so has part: feature:13139-14155:1:exon
subclass of: SO_0000010

position:13139:1
position: 13139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14155:1
position: 14155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13139-14155:1:exon

H3M12_RS12005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12005
old locus tag: H3M12_12005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011674571.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MTHSQINTHKHYQQLSLSDRATIQALRATGDTATVIAQKLHRSKATISREITRGSVTQLDSKRHSHQVYLAETAQAIHDRKRDRTGHHAFLKTGRAFFKALTKELTRKPRVHSVDSFVHFYRDQGKSCPSTTTVYRYIDAGLLELDNMTLPKKLRRRVKGYKNAHKRKNKKIYGDSIELRPAAVNDRTGVGHWEGDLVKGIRSADEPALMTLTERYSRTEIIVKIPDYHADTCLKALQDTINDYGAKEFESITFDNGSEFAKLSEIVGTQIYFAHPYSPWERGTNENTNGLLREYFPKGKSLRDVTLVEIQAVQSALNHRPRRILNYLRPCDYYRRMA
SIO_010081: H3M12_RS12005
subclass of: SO_0000673
so part of: H3M12_RS12005
location: 13139..14155
location: region:13139-14155:1
so has part: feature:13139-14155:1:exon

WP_096109476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13139-14155:1:exon

H3M12_RS12010
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12010
old locus tag: H3M12_12010
so part of: sequence
location: complement(14314..15360)
location: region:14314-15360:-1
so has part: feature:14314-15360:-1:exon
subclass of: SO_0000010

position:14314:-1
position: 14314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15360:-1
position: 15360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14314-15360:-1:exon

H3M12_RS12010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12010
old locus tag: H3M12_12010
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF021616.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family A protein
translation: MNEKMITIVVPVFNGEKYIEESINSILNQKYKNFEILIVNDGSKDDTQKLLEQLYATNRKVKIVNTENRGVSSARNLGISLAKGEFLIFMDADDRLVKNALYLINEKLSKNIPELLIFGFSVFNDSRRHNDTYLLKNLEKKQEVSNNCLMKCMLSTKNNLLGYVWRAAYSVEMLKKNKIFFDERLKISEDYLFLLESIVNSRKIIVSSDELYEYHLSESSMSNKYIPTLLKDMMWVNKWIESNIISNNSQLKPQYINTLTNTYIRFVQNTIRDKHKSPLEKLKYIQVGRSNYHFEEVIDVSFKNLNDFDLKSRIGITLFKYKLESLYMFIFTLKYKLGELFCHRIRQR
SIO_010081: H3M12_RS12010
subclass of: SO_0000673
so part of: H3M12_RS12010
location: complement(14314..15360)
location: region:14314-15360:-1
so has part: feature:14314-15360:-1:exon

WP_182151079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14314-15360:-1:exon

H3M12_RS12015
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12015
old locus tag: H3M12_12015
so part of: sequence
location: complement(15353..16537)
location: region:15353-16537:-1
so has part: feature:15353-16537:-1:exon
subclass of: SO_0000010

position:15353:-1
position: 15353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16537:-1
position: 16537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15353-16537:-1:exon

H3M12_RS12015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12015
old locus tag: H3M12_12015
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLFKINNQLYSGRFFLFILLIVIYSFSSNDDNISGAGLFSVSSLLKYGILSLCVIFELLAYFSKKKLTSDTLLLNNFKKFFYFFVIVSIISISLSIKSSEFSLRIIQTFIFVFIPMLYAFLVINTWNKSEIHTAFKLGLLISIIGYVYSTKIGILGILDNLSTINYQNTNSTVLESSTFALLSVGFAGFFCYFKKGYLWKFLSVLFVILTFKRQITLTAILLFILGFFNIRRKKVNIYIFIISGLVLMALAFAYYYAIEPQHIVEFSQILGVDLRSFSTNRTDRLNWLLNSDFKTYGFGSSTDYMYKTFGGFALEMDTVQLYVEMGGIGIITFISSYLSFAKNNLYVYVFMCLLIVNSIFSSGMASTFAWIVILIGMALIMVENNDALKEDSHE
SIO_010081: H3M12_RS12015
subclass of: SO_0000673
so part of: H3M12_RS12015
location: complement(15353..16537)
location: region:15353-16537:-1
so has part: feature:15353-16537:-1:exon

WP_182151080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15353-16537:-1:exon

H3M12_RS12020
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12020
old locus tag: H3M12_12020
so part of: sequence
location: complement(16540..17259)
location: region:16540-17259:-1
so has part: feature:16540-17259:-1:exon
subclass of: SO_0000010

position:16540:-1
position: 16540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17259:-1
position: 17259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16540-17259:-1:exon

H3M12_RS12020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12020
old locus tag: H3M12_12020
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF025025.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MDNKISVVIRTYNEEKHIGEVLESLQKQTYKNYEIVIVDSGSTDGTVEILKKFDTKLVFIEKKEFNYSYASNIGVKNSMGDIVCFLSGHSVPVNDDYLLNINNIFQDEKIGGCYGDVIALPDGSIYEKTYNYLGYLKNRVKGMDNQVKYETTIHPGIFSCSNAAARKNLLVKHPFQVDLGNGGEDVEVAYRIIQDGYVIAKVPRLLVKHSHGQNLLAFMKQLKSWRIMYREVLSFINGD
SIO_010081: H3M12_RS12020
subclass of: SO_0000673
so part of: H3M12_RS12020
location: complement(16540..17259)
location: region:16540-17259:-1
so has part: feature:16540-17259:-1:exon

WP_182151081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16540-17259:-1:exon

H3M12_RS12025
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12025
old locus tag: H3M12_12025
so part of: sequence
location: complement(17290..17679)
location: region:17290-17679:-1
so has part: feature:17290-17679:-1:exon
subclass of: SO_0000010

position:17290:-1
position: 17290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17679:-1
position: 17679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17290-17679:-1:exon

H3M12_RS12025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12025
old locus tag: H3M12_12025
inference: COORDINATES: protein motif:HMM:NF017515.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MTINYIPKVIHLIDIAGTGKLEQATKYSMALKKFASDYEIKVWTNDNLPDVVTQNTYYRAAISNSRYAFASDVARMWVLLNEGGIYLDSDVELKKSFNPILNKEIPIIYHSNNDDFIAKFTHIVDALFQ
SIO_010081: H3M12_RS12025
subclass of: SO_0000673
so part of: H3M12_RS12025
location: complement(17290..17679)
location: region:17290-17679:-1
so has part: feature:17290-17679:-1:exon

WP_233449250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17290-17679:-1:exon

H3M12_RS12030
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12030
old locus tag: H3M12_12030
so part of: sequence
location: complement(17679..18173)
location: region:17679-18173:-1
so has part: feature:17679-18173:-1:exon
subclass of: SO_0000010

position:18173:-1
position: 18173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17679-18173:-1:exon

H3M12_RS12030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12030
old locus tag: H3M12_12030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016366257.1
GO function: GO:0016758 - hexosyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MKIFVTVATHEHSFTRLMKQIELAAKDNPQDEFYVQYGYSIVPTGKNIHCEKFMTYSHMKEMYQKCDCVVMHAGPASMFDALNAKITPIIVPRYHDLNEHVNNHQVEFTKFLESKAFPIIAVYKDDSLEGALDDVRKGMAVKGYKSHQQKFCSDLENIIEQLVP
SIO_010081: H3M12_RS12030
subclass of: SO_0000673
so part of: H3M12_RS12030
location: complement(17679..18173)
location: region:17679-18173:-1
so has part: feature:17679-18173:-1:exon

WP_182151082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17679-18173:-1:exon

H3M12_RS12035
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12035
old locus tag: H3M12_12035
so part of: sequence
location: complement(18173..18622)
location: region:18173-18622:-1
so has part: feature:18173-18622:-1:exon
subclass of: SO_0000010

position:18622:-1
position: 18622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18173-18622:-1:exon

H3M12_RS12035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12035
old locus tag: H3M12_12035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017650132.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PssD/Cps14F family polysaccharide biosynthesis glycosyltransferase
translation: MKIALVGSSGGHLTHLKQLEPVWHKHDRFWVTFDKPDASSYLTEERWYKAYFPTNRNVFNLIRNTFVAFRVLLKERPDVIISSGAGVAVPFFYIGKLIGAKLVYIEVFDRIDKSTVTGRLVYPITDKFIVQWDEMKKVYPKAINLGSLF
SIO_010081: H3M12_RS12035
subclass of: SO_0000673
so part of: H3M12_RS12035
location: complement(18173..18622)
location: region:18173-18622:-1
so has part: feature:18173-18622:-1:exon

WP_159301356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18173-18622:-1:exon

H3M12_RS12040
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12040
old locus tag: H3M12_12040
so part of: sequence
location: complement(18904..19092)
location: region:18904-19092:-1
so has part: feature:18904-19092:-1:exon
subclass of: SO_0000010

position:18904:-1
position: 18904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19092:-1
position: 19092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18904-19092:-1:exon

H3M12_RS12040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12040
old locus tag: H3M12_12040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015474641.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDNKLAVIGSELPVLQAKGTYKYLKEITGNGAYYQVAWQKLADGYIALYGTAPIQINIFDVQ
SIO_010081: H3M12_RS12040
subclass of: SO_0000673
so part of: H3M12_RS12040
location: complement(18904..19092)
location: region:18904-19092:-1
so has part: feature:18904-19092:-1:exon

WP_182151083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18904-19092:-1:exon

H3M12_RS12045
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
gene: topB
locus tag: H3M12_RS12045
old locus tag: H3M12_12045
so part of: sequence
location: complement(19214..21352)
location: region:19214-21352:-1
so has part: feature:19214-21352:-1:exon
subclass of: SO_0000010

position:19214:-1
position: 19214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21352:-1
position: 21352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19214-21352:-1:exon

H3M12_RS12045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
gene: topB
locus tag: H3M12_RS12045
old locus tag: H3M12_12045
EC number: 5.6.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008459746.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IA DNA topoisomerase
translation: MSNTVILAEKPSQARSYVEAFQKSTKKQGYYTVSDPVLPQNTVITYGFGHLVELATPEKYDQKYKQWALSNLPIFPDKYKFIVPTDKKTQFKVVKDLLTKADTIIVATDSDREGSNIAWSIMNQAHIDVKSKTIKRLWLNSLEKDAIITGFKNLGDWHKDYLAYKEAQTRQISDWLIGMNGSPLYTLLLRQNGVRGVYSIGRVQTPTLYMVYQRDQAIKNFKPEPYFELNAEILANQQKFVAKLDPYQRFKDEAGLMTFMQAKHVQKGSQGGLIKDVQKQAKKSASPQLFSLSSLQSAMNKRYHASASQTLAAIQSLYEAKLLSYPRTDCAYITNEEFEYLVANLTKYLGLVSKRVALTNTTPNKRYVNGKKVEEHYAIIITKFVPTKEKLASLPKLQQQVYDLVLRTTLAMFADPYEYEETIIITQVGDANFKATGKVPTKQGWQVLFDDHKADQQEAATLPIVHQGDQVQANLQTPQKETTPPVPFTEGTLITAMKTAGKTLDDEEAQAILKDVQGIGTSATRANVLEVLKKRGYLVTEKNKLHVSEAGITLCKAVELEPLLISPEMTAKWEQALQQISTEERTPDNFLSQIKNFVAKLIADVPTQLTGNAAIKQQINHQQQAQKSDEVFLETPQATVLNKQKFYIVKPKQGEDFTLPKKWSSKTLGKTAIKALVTKGETSKLKGFKSKKGKSFDAKLKLDGHKLSFDFD
SIO_010081: H3M12_RS12045
subclass of: SO_0000673
so part of: H3M12_RS12045
location: complement(19214..21352)
location: region:19214-21352:-1
so has part: feature:19214-21352:-1:exon

WP_182151086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19214-21352:-1:exon

H3M12_RS12050
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12050
old locus tag: H3M12_12050
so part of: sequence
location: complement(21369..22157)
location: region:21369-22157:-1
so has part: feature:21369-22157:-1:exon
subclass of: SO_0000010

position:21369:-1
position: 21369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22157:-1
position: 22157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21369-22157:-1:exon

H3M12_RS12050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12050
old locus tag: H3M12_12050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003712731.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein
translation: MNFAVSGVKAILDQLSTSLPIIDTWYGIFLAFATSMVVVVVLARIIITLIGEADESTDVTWANVIIDAVRSAIAIPVMVFLQAFLQTRIILPLAKGMFDMSGKFSADAVYSTSQVTKSIKITGFMQILFLAFFAIVTVAFFLKMCIYFADMAFYNLSIPIVAMSIASESFDYSSTWWKKLVYYNVSMLSQVLSLTLSIWCFTHIGSKWSFVAFMGTIGFGWLVLHTPHVIQDFWASTGITKSAGRSVMRGMGNIGRNMLRGQ
SIO_010081: H3M12_RS12050
subclass of: SO_0000673
so part of: H3M12_RS12050
location: complement(21369..22157)
location: region:21369-22157:-1
so has part: feature:21369-22157:-1:exon

WP_233449251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21369-22157:-1:exon

H3M12_RS12055
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12055
old locus tag: H3M12_12055
so part of: sequence
location: complement(22251..22664)
location: region:22251-22664:-1
so has part: feature:22251-22664:-1:exon
subclass of: SO_0000010

position:22251:-1
position: 22251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22664:-1
position: 22664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22251-22664:-1:exon

H3M12_RS12055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12055
old locus tag: H3M12_12055
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNKKITIASIVLAFLVVLLGIAFIFGHKTTAEKLQAQEWTLTSQEESNTVNFKKDNTMILGKEPMTENFKYSIKEQGNVEYLKLTHHEDLGSDGKYYFKIKKTDSGYSLILDKGKTNQPAKNAMYGMTDKNNLVSK
SIO_010081: H3M12_RS12055
subclass of: SO_0000673
so part of: H3M12_RS12055
location: complement(22251..22664)
location: region:22251-22664:-1
so has part: feature:22251-22664:-1:exon

WP_182151068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22251-22664:-1:exon

H3M12_RS12060
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12060
old locus tag: H3M12_12060
so part of: sequence
location: complement(22677..24206)
location: region:22677-24206:-1
so has part: feature:22677-24206:-1:exon
subclass of: SO_0000010

position:22677:-1
position: 22677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24206:-1
position: 24206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22677-24206:-1:exon

H3M12_RS12060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12060
old locus tag: H3M12_12060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015007096.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MNGTILGMVDKQIIYQNNSTKPNRNVFVVGGPGSYKTQSVVITNLFNETQNSIVVTDPKGELYEKTAGIKVAQGYQVHVVNFANMIHSDRYNPFDYIERDIQAETVATKIVQSENAEGKKDVWFSTQRQLLKALILFVMNHREPKERNLAGVTNVLQKFDVEPDKDETDSPLDSLFLDLNMTDPARRAYELGFKKAKGEMKASIIESLLATVSKFVDAEVADFTGFSDFDLKDIGNAKVVLYVIIPVMDNTYESFINLFFSQLFDELYKLASDNGAKLPNPVDFILDEFVNLGKFPKYEEFLATCRGYGIGVTTICQTLTQLQALYGKDKAESILGNHAVKICLNAANDVTAKYFSDLLGKSTVKVETGSESTSHSKEESHSKSDSYSYTSRSLMTPDEIMRMPDTQSILIFSNQRPIKATKAFQFKLFPGADHLVELKQNDYTNEPSGSQVTKFNEANKKWEAELAKAKATRAKNDVKPEEEEDMQDELDQATKQQESVQNENEDVDF
SIO_010081: H3M12_RS12060
subclass of: SO_0000673
so part of: H3M12_RS12060
location: complement(22677..24206)
location: region:22677-24206:-1
so has part: feature:22677-24206:-1:exon

WP_065980478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22677-24206:-1:exon

H3M12_RS12065
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12065
old locus tag: H3M12_12065
so part of: sequence
location: complement(24209..24661)
location: region:24209-24661:-1
so has part: feature:24209-24661:-1:exon
subclass of: SO_0000010

position:24209:-1
position: 24209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24661:-1
position: 24661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24209-24661:-1:exon

H3M12_RS12065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12065
old locus tag: H3M12_12065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015007097.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein
translation: MKDKLLNSVKVSWPYLLTLIIGLYLAEILAGSVMALSHYKLTFADHMPTVLKQLALHPWHYYNLYLGQKNPVLIIVSIAVVLYTIYFALKRNSKHKAWETADTDTHGSATWGNVKDLLTQYFTISSKDLSSQFNESLNSDVIKQLQDKGE
SIO_010081: H3M12_RS12065
subclass of: SO_0000673
so part of: H3M12_RS12065
location: complement(24209..24661)
location: region:24209-24661:-1
so has part: feature:24209-24661:-1:exon

WP_182151069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24209-24661:-1:exon

H3M12_RS12070
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12070
old locus tag: H3M12_12070
so part of: sequence
location: complement(24662..24973)
location: region:24662-24973:-1
so has part: feature:24662-24973:-1:exon
subclass of: SO_0000010

position:24662:-1
position: 24662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24973:-1
position: 24973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24662-24973:-1:exon

H3M12_RS12070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12070
old locus tag: H3M12_12070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013855348.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVIFIGHNYINTIEKRREIVQIPKDTKQTLFFYRDDCSDCQSIFHQIYWHNAINHNIVLINMNQPQNRHYIQKYQLTSVPTLIHGKQRYSGTNQQRIKQIVGD
SIO_010081: H3M12_RS12070
subclass of: SO_0000673
so part of: H3M12_RS12070
location: complement(24662..24973)
location: region:24662-24973:-1
so has part: feature:24662-24973:-1:exon

WP_056988699.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24662-24973:-1:exon

H3M12_RS12075
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12075
old locus tag: H3M12_12075
so part of: sequence
location: complement(25014..25631)
location: region:25014-25631:-1
so has part: feature:25014-25631:-1:exon
subclass of: SO_0000010

position:25014:-1
position: 25014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25631:-1
position: 25631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25014-25631:-1:exon

H3M12_RS12075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12075
old locus tag: H3M12_12075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015007099.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRSVVLSIALGSLILIMSLGTNAYQHSQVKQAQQQISRLQQQKRQVSQQLTKTNQQKQLLSTQIDSYKTYQNNKDKSTAEIDFNNTTNEFLKYMFTFEPDSYKTRKEHIKGLISNDLYHQYFPSNQNFGDSNNVSSKLDQAKVYTRAKQDQNIDGLAVITFESKTGSNDFKKQTVLYQLSYDTTAKQLTKVKSLGDSFEASDIQ
SIO_010081: H3M12_RS12075
subclass of: SO_0000673
so part of: H3M12_RS12075
location: complement(25014..25631)
location: region:25014-25631:-1
so has part: feature:25014-25631:-1:exon

WP_180819091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25014-25631:-1:exon

H3M12_RS12080
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12080
old locus tag: H3M12_12080
so part of: sequence
location: complement(25646..26644)
location: region:25646-26644:-1
so has part: feature:25646-26644:-1:exon
subclass of: SO_0000010

position:25646:-1
position: 25646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26644:-1
position: 26644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25646-26644:-1:exon

H3M12_RS12080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12080
old locus tag: H3M12_12080
inference: COORDINATES: protein motif:HMM:NF037025.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail tip lysozyme
translation: MEENAKNIAKHWKQKYGATPQAAAGILGVLQLESRLDPKSVNSSSGATGLAQWLGGRKDKLEDLAHKESKPATNLGVQLDYLDQELNSSYYASNKQIFKYTDVHKATKAWLMDYEGMSKNPEQWFLSKRYAFADHWYSVIGTKDPVAGDSLKNASQDEEANANLDCASDTDTGKADGNIIKTAKSMKGYFKYGQSHPSADLGTNLKNPNKSGTTDCSGFIWLTLNKAGYKVPANMGWFTGTMASDAKGSHQYLKQISENDAKAGDIVIVNQGAGAGNNGHTAFITENWHGKNTKIIEEGGDTTGHVNESTFGTAFYSLLSGSDVTLARPIKK
SIO_010081: H3M12_RS12080
subclass of: SO_0000673
so part of: H3M12_RS12080
location: complement(25646..26644)
location: region:25646-26644:-1
so has part: feature:25646-26644:-1:exon

WP_233449247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25646-26644:-1:exon

H3M12_RS12085
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12085
old locus tag: H3M12_12085
so part of: sequence
location: complement(26825..28243)
location: region:26825-28243:-1
so has part: feature:26825-28243:-1:exon
subclass of: SO_0000010

position:26825:-1
position: 26825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28243:-1
position: 28243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26825-28243:-1:exon

H3M12_RS12085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12085
old locus tag: H3M12_12085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016370339.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type VII secretion protein EssB/YukC
translation: MSKSNQLLNIEVGTFRRQGNKLILELNHNQFRYDQLSELNELKQADANFLQLVNVVEQDQKVVLTYTLPDKVRSLKELPHENKAIRAAIAKEIMAQNVVADSQYHIALNPANLWYYPMQHVWYAYRANELMPYDDKHSNLAKYKALILFCLTGTPYERLLSNPKEALAKHPDDYLQQVAKATSLNELTEVVNSIEDFVSYHEWQEVETAQQKTKQRLWLSVAGVAIVAVLAVGLVHKSDERKYQSLANQNQAQVTRLKYSGQIQTALNDHKWSEAQKDMQRAGYPATKQVNVFLKHGQYQQALKVDPSQLNKVVNTAYANKDSGQVAKWELPTKATSKQKDQLKLEKAIVNYDTNTLNNQLSFTTNADVLLRMGQAFLAHNDTQDAQTAQTKLAGVSSPKAKYLKALLSLNDAKNEVGDAQKKLDDANKIDGSKDKDKDKKVDSAKSDLKNAQSDQSAAQDKVDKAKQKVGA
SIO_010081: H3M12_RS12085
subclass of: SO_0000673
so part of: H3M12_RS12085
location: complement(26825..28243)
location: region:26825-28243:-1
so has part: feature:26825-28243:-1:exon

WP_182151070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26825-28243:-1:exon

H3M12_RS12090
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12090
old locus tag: H3M12_12090
so part of: sequence
location: complement(28236..30254)
location: region:28236-30254:-1
so has part: feature:28236-30254:-1:exon
subclass of: SO_0000010

position:28236:-1
position: 28236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30254:-1
position: 30254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28236-30254:-1:exon

H3M12_RS12090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12090
old locus tag: H3M12_12090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003680243.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF87 domain-containing protein
translation: MSFGDKVIDLFMPTKKEHNQGNSDQTSSKPKPEIEDFTRLIDRDSLHSLFPFSWEQYPTYVQSGENFIRVLAIADYPKRVYGNWLSELKRKKGVIDIVQYIDSASNNSMITYYKKTIQNKEAQKLNTFDPYKKKILQNYIDSANMQLDKYLDNSTTFVYQHMLIYLRANSLAELDDLTDNVKNTLIKLQMKPLVPVKATFQAFWSTMPINENLMGDYTYKESNTEVASSMFPFDDAEILDLKPRSDIEGVNKDTNSLIAVDMLDRNKTLNQNQVIIGTSGVGKTTYMIQKILRYAIQDYQIYIIDPENEYTKIVEALGGAVLHLTSNAKYKINPLQIFSEEILSADEAVTNLDLLVKDKIQRLKGFFEVLKTGITQVELAILDDVVKQAYVNSGVLKYSRLKEIKDDQWPTLSNVYDELEKLADKDADKFNRVKDFYYILGSYTHGSNSLFDGHTNVNLKGKIISFDLKPLQSEQEVQSAAYLNTFQYLWDEITKDRHSRKKLFVDEFHFLTLHKAAATFFHQAYKRFRKYNAGAIAGTQQIQDVIEGTTDTGQNIGEAIIGNSYTKVFFGLDGKGVDDVITKLRMTFSDKEKKLLERRRQGEALMIYGSQRAFMKVELTEEELRLIDPEAYQEKYNRETANQPDYQKRVVLTPSEIDALTTTEEEGGALNE
SIO_010081: H3M12_RS12090
subclass of: SO_0000673
so part of: H3M12_RS12090
location: complement(28236..30254)
location: region:28236-30254:-1
so has part: feature:28236-30254:-1:exon

WP_128484933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28236-30254:-1:exon

H3M12_RS12095
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12095
old locus tag: H3M12_12095
so part of: sequence
location: complement(30266..30925)
location: region:30266-30925:-1
so has part: feature:30266-30925:-1:exon
subclass of: SO_0000010

position:30266:-1
position: 30266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30925:-1
position: 30925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30266-30925:-1:exon

H3M12_RS12095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12095
old locus tag: H3M12_12095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016381866.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrsD/TraD family conjugative transfer protein
translation: MRLKKSKTANKSVKLDWDYQPPKINGGKETIDDMSLVVGMYGNYEVTKTGNLVGILEVSGINLDLLNETEQQDVFEDYGAFLMSTLGEGVDDTLQFLEPTIPVNMTAYLNGLKRRYLALQKDHPEQQFKIQLIASYLDHFTKVQESKNMTTKQHLLIVKVPIKDKSVKSLNLAVTHLDEKIEQVKRDIENALTDFDVTAKVLTSQEVQEILKNLINFNG
SIO_010081: H3M12_RS12095
subclass of: SO_0000673
so part of: H3M12_RS12095
location: complement(30266..30925)
location: region:30266-30925:-1
so has part: feature:30266-30925:-1:exon

WP_016381866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30266-30925:-1:exon

H3M12_RS12100
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12100
old locus tag: H3M12_12100
so part of: sequence
location: complement(30894..31256)
location: region:30894-31256:-1
so has part: feature:30894-31256:-1:exon
subclass of: SO_0000010

position:30894:-1
position: 30894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31256:-1
position: 31256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30894-31256:-1:exon

H3M12_RS12100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12100
old locus tag: H3M12_12100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014216295.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKGKEFIFPENVDKDYGIWKDYTLKDFGYAALAGLVGLIFIAIPPYGLILVLIKIVIVVLAMTIVMAILTIRPVAARKNIKVRDNFKLKRRYANGQKLFYLKPKKRGELNAFEEEQNRQ
SIO_010081: H3M12_RS12100
subclass of: SO_0000673
so part of: H3M12_RS12100
location: complement(30894..31256)
location: region:30894-31256:-1
so has part: feature:30894-31256:-1:exon

WP_014216295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30894-31256:-1:exon

H3M12_RS12105
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12105
old locus tag: H3M12_12105
so part of: sequence
location: complement(31277..31615)
location: region:31277-31615:-1
so has part: feature:31277-31615:-1:exon
subclass of: SO_0000010

position:31277:-1
position: 31277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31615:-1
position: 31615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31277-31615:-1:exon

H3M12_RS12105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12105
old locus tag: H3M12_12105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014216294.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CagC family type IV secretion system protein
translation: MSKYRKMKALSTTGATAIYLGLMNAQVVLAADGGEVKSKLTSAGKTIQGILTGLVVLVGICVALFIIIKRMPDADDPREKSEVYHAVGRVAGLVALAAAIIWLLPWVYSLFT
SIO_010081: H3M12_RS12105
subclass of: SO_0000673
so part of: H3M12_RS12105
location: complement(31277..31615)
location: region:31277-31615:-1
so has part: feature:31277-31615:-1:exon

WP_054519297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31277-31615:-1:exon

H3M12_RS12110
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12110
old locus tag: H3M12_12110
so part of: sequence
location: complement(31617..32231)
location: region:31617-32231:-1
so has part: feature:31617-32231:-1:exon
subclass of: SO_0000010

position:31617:-1
position: 31617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32231:-1
position: 32231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31617-32231:-1:exon

H3M12_RS12110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12110
old locus tag: H3M12_12110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003680239.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIENWQDVDEHLVVDNDKAIIVKDSKLLDNPEALKTEMQRSGKPVTEVRSKLVQKSVKGRVKTDPIKISAWFDRKHESDNAQKAEKLVSNKPTHQYKQIKNEMTFFGESFLEGFLGFYGLEVDNALRRYEHNLHVLETQELGQSEKEYYLATSENGHVRLATDPLPSQQIAEEQLNKFYQREPEETQAEQIQLRTSEDDRKEE
SIO_010081: H3M12_RS12110
subclass of: SO_0000673
so part of: H3M12_RS12110
location: complement(31617..32231)
location: region:31617-32231:-1
so has part: feature:31617-32231:-1:exon

WP_182151071.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31617-32231:-1:exon

H3M12_RS12115
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12115
old locus tag: H3M12_12115
so part of: sequence
location: complement(32271..32564)
location: region:32271-32564:-1
so has part: feature:32271-32564:-1:exon
subclass of: SO_0000010

position:32271:-1
position: 32271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32564:-1
position: 32564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32271-32564:-1:exon

H3M12_RS12115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12115
old locus tag: H3M12_12115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015007070.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNSNEWHTLAEASRILGKNDRYVSNWIKRHDDFPKPMLMDISGKKIIHDKGIQWISEHTKKEGVLKSKVSAIEDKFLKMTVLGKHPNIPFYMSMNG
SIO_010081: H3M12_RS12115
subclass of: SO_0000673
so part of: H3M12_RS12115
location: complement(32271..32564)
location: region:32271-32564:-1
so has part: feature:32271-32564:-1:exon

WP_054519299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32271-32564:-1:exon

H3M12_RS12120
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12120
old locus tag: H3M12_12120
so part of: sequence
location: complement(32671..34728)
location: region:32671-34728:-1
so has part: feature:32671-34728:-1:exon
subclass of: SO_0000010

position:32671:-1
position: 32671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34728:-1
position: 34728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32671-34728:-1:exon

H3M12_RS12120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12120
old locus tag: H3M12_12120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014386868.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobQ family relaxase
translation: MAIFHMSFQNISAGKMRSAVASASYRSGDKLFSDKEGNTYYYARDVKPEAFILTPKNAPDWAKDRQKLWNEVEKKDRKSNSRYAKEFNVALPVELSESEQKELLTKYVQENFVDQGMVADVAIHRDHPDNPHAHVMLTNRPFNPDGTWGIKSRKEYILDEEGNKTYTKSGYARNRKIWLTDWDKKEKITEWRHNWATAVNQILEAKNLPDRISEKSYEEQGIDEVATQHEGINSQKEKRQEFNQNVKQQRQAKAEAKNANEKIHNERRMQTLQRHYSFNEKRLVAQLSNRLKTFVSLENLDEKQRMLFNWKNSAMIKQAVGEDVTKQLVTITQQEKSLSEANQLLDKVVNRTVSKLYPDVDFEQITMAEKRDLVKETDSEQRVFTGDELKDRLAMIRTNIINQQVLTFTKRPFASWLMLEKQEQRAKETISDILANKGYQLADIKRTKGTLLSDFDEKQQAVLKKNIKELSAINETKQVVDTQYNNVLSKTFPDMSLDQVKMTEKERLYTAVVYYNPELKSLEKRDLDQLRNNPPVQFTTQEHAQGLAYLSGQVKSDEIQNANLLRVLKNRGTQQLFIGEAGQDKKISAKQLEQAKQAVKQHNQKNDDFRKENMPDYRAVNYNENTPANYMNKLLSDTLMSLLYENGQDHELNRQKKAQKELEYELDKKKRQHQKHSRHSGTIHR
SIO_010081: H3M12_RS12120
subclass of: SO_0000673
so part of: H3M12_RS12120
location: complement(32671..34728)
location: region:32671-34728:-1
so has part: feature:32671-34728:-1:exon

WP_182151072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32671-34728:-1:exon

H3M12_RS12125
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12125
old locus tag: H3M12_12125
so part of: sequence
location: 34999..35208
location: region:34999-35208:1
so has part: feature:34999-35208:1:exon
subclass of: SO_0000010

position:34999:1
position: 34999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35208:1
position: 35208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34999-35208:1:exon

H3M12_RS12125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12125
old locus tag: H3M12_12125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015474621.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSQSNLEKQEAKLKQLNQKIKAEKNKIEQNLGKQIIRSANLDYATLTTPQIKMIAKKVAAFLNQAQNNQ
SIO_010081: H3M12_RS12125
subclass of: SO_0000673
so part of: H3M12_RS12125
location: 34999..35208
location: region:34999-35208:1
so has part: feature:34999-35208:1:exon

WP_057909958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34999-35208:1:exon

H3M12_RS12130
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12130
old locus tag: H3M12_12130
so part of: sequence
location: 35228..35506
location: region:35228-35506:1
so has part: feature:35228-35506:1:exon
subclass of: SO_0000010

position:35228:1
position: 35228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35506:1
position: 35506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35228-35506:1:exon

H3M12_RS12130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12130
old locus tag: H3M12_12130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003603789.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPNQYEKLVEQQARLKQKIEREDFKLRQSKYYESRQARKARSRRLIQKGALLEKYFQADNLSVEQTEDLLKIFANYVNAHKPNKFKNDQPNN
SIO_010081: H3M12_RS12130
subclass of: SO_0000673
so part of: H3M12_RS12130
location: 35228..35506
location: region:35228-35506:1
so has part: feature:35228-35506:1:exon

WP_070368075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35228-35506:1:exon

H3M12_RS12135
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12135
old locus tag: H3M12_12135
pseudo: true
so part of: sequence
location: complement(35496..36185)
location: region:35496-36185:-1
so has part: feature:35496-36185:-1:exon
subclass of: SO_0000010

position:35496:-1
position: 35496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36185:-1
position: 36185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35496-36185:-1:exon

H3M12_RS12135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12135
old locus tag: H3M12_12135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007124583.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: zeta toxin family protein
SIO_010081: H3M12_RS12135
subclass of: SO_0000673
so part of: H3M12_RS12135
location: complement(35496..36185)
location: region:35496-36185:-1
so has part: feature:35496-36185:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35496-36185:-1:exon

H3M12_RS12140
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12140
old locus tag: H3M12_12140
so part of: sequence
location: complement(36187..36384)
location: region:36187-36384:-1
so has part: feature:36187-36384:-1:exon
subclass of: SO_0000010

position:36187:-1
position: 36187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36384:-1
position: 36384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36187-36384:-1:exon

H3M12_RS12140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12140
old locus tag: H3M12_12140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003691009.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKPSKEIETIDQLLADPWAVNIQDIWEQAAHNPDPDKRKLFDALHTYLLDKRQEQIIDENHFVI
SIO_010081: H3M12_RS12140
subclass of: SO_0000673
so part of: H3M12_RS12140
location: complement(36187..36384)
location: region:36187-36384:-1
so has part: feature:36187-36384:-1:exon

WP_182151073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36187-36384:-1:exon

H3M12_RS12145
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12145
old locus tag: H3M12_12145
so part of: sequence
location: complement(36540..37643)
location: region:36540-37643:-1
so has part: feature:36540-37643:-1:exon
subclass of: SO_0000010

position:36540:-1
position: 36540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37643:-1
position: 37643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36540-37643:-1:exon

H3M12_RS12145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12145
old locus tag: H3M12_12145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016527414.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MTKSTNFNYYEADNVYGALFFQFPKVLMYGEQYKHLSNDAKLAYMVLKDRLEYSLRNNWVDSEGHVYFIFTNQELMDLFNCSKGKVIKIKAELESIGLLVQKQMGFNPKTKKNEPNRLYLSKLDVKATDVYLRGEFGQKSSQTLATSGSSKNELPRETVETLATSGSSKNELPHKFVDNSSQTLATSGSSKNGLNLYIEPKERDKNRYNIDTQKLNFSTAHFSPAEIQKQNQDLVNHANDFLTDEDSGLPVFLEPEAVQLLSFWCRTPQQMRRFIGIILNAKYRVEKDHKDIGVIIPLDDEELKPLMTKALRRYFNALRSNEKHIKNVENYLYGTMQNLFGVWWNKQAAREYAAKHPEEQNADNEWF
SIO_010081: H3M12_RS12145
subclass of: SO_0000673
so part of: H3M12_RS12145
location: complement(36540..37643)
location: region:36540-37643:-1
so has part: feature:36540-37643:-1:exon

WP_182151074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36540-37643:-1:exon

H3M12_RS12150
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12150
old locus tag: H3M12_12150
so part of: sequence
location: complement(38548..38787)
location: region:38548-38787:-1
so has part: feature:38548-38787:-1:exon
subclass of: SO_0000010

position:38548:-1
position: 38548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38787:-1
position: 38787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38548-38787:-1:exon

H3M12_RS12150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12150
old locus tag: H3M12_12150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016370331.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAFDPENKNIKKALQKNETEQPTDTKDKLVIPVFKDEEERTKNYTFSLQPSARKRLDGLAKEHNFKSASKFLNELIKNM
SIO_010081: H3M12_RS12150
subclass of: SO_0000673
so part of: H3M12_RS12150
location: complement(38548..38787)
location: region:38548-38787:-1
so has part: feature:38548-38787:-1:exon

WP_010011603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38548-38787:-1:exon

H3M12_RS12155
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12155
old locus tag: H3M12_12155
so part of: sequence
location: complement(38859..39650)
location: region:38859-39650:-1
so has part: feature:38859-39650:-1:exon
subclass of: SO_0000010

position:38859:-1
position: 38859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39650:-1
position: 39650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38859-39650:-1:exon

H3M12_RS12155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12155
old locus tag: H3M12_12155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016527412.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MEIITFSAIKGGVGKTTLAFNYGEWLAKNGKHVLFIDLDHQSNLTQTYNIYDNQDTVGNIFLDRGKVKIHEISACISLIAGDMHLDDIERTIENKTNKNMFLYMWLSDNYERLNLGKFEYIILDCHPDFSTATKNAVIISNAILSPITPSEHGYNAKFNLEERINELRKEAIDYSTRKSYVTTKLFFIANMIKHNTRSSRELLKALKGDPSVLATVPEKELFNRSTLDKKSLSKMAEDHKTYIDQHEFFDSMDKTFNEITEKL
SIO_010081: H3M12_RS12155
subclass of: SO_0000673
so part of: H3M12_RS12155
location: complement(38859..39650)
location: region:38859-39650:-1
so has part: feature:38859-39650:-1:exon

WP_065463689.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38859-39650:-1:exon

H3M12_RS12160
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12160
old locus tag: H3M12_12160
so part of: sequence
location: 39961..40959
location: region:39961-40959:1
so has part: feature:39961-40959:1:exon
subclass of: SO_0000010

position:39961:1
position: 39961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40959:1
position: 40959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39961-40959:1:exon

H3M12_RS12160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12160
old locus tag: H3M12_12160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017866971.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MSPYTHLTLKDRECILLGVTLHHTYQVIANQIGCSKATVSREIKRNGGRGAYSAVKAQQNYQQRRLKSRRLRVLENLKLRDFVLHCILQRQWSPEQIAGRLSLETSNWHISYNTIYRGIERNNLGVKRKSHGARGFARKLRHRGKTRKVKGTVNERRGRFNNVPSVHERPVSCENRTRFGHWEGDTVRGKVGRSGLVSLVDRKSRYLLSERVPKVNAKNVTQAMIDLLHTVTPKRVRTLTPDRGTEFAGYREVGKELGISVYFPDPHAPQQRGTNENTNGLIREYFPKGTDLDELTDQDIAKFVRNLNNRPRKVLGWKTPSEVFFGKKLHLI
SIO_010081: H3M12_RS12160
subclass of: SO_0000673
so part of: H3M12_RS12160
location: 39961..40959
location: region:39961-40959:1
so has part: feature:39961-40959:1:exon

WP_182150575.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39961-40959:1:exon

H3M12_RS12165
type: Gene
subclass of: SO_0000704
RO_0002162: 2292255
locus tag: H3M12_RS12165
old locus tag: H3M12_12165
pseudo: true
so part of: sequence
location: 41036..41972
location: region:41036-41972:1
so has part: feature:41036-41972:1:exon
subclass of: SO_0000010

position:41036:1
position: 41036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41972:1
position: 41972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41036-41972:1:exon

H3M12_RS12165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2292255
locus tag: H3M12_RS12165
old locus tag: H3M12_12165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013355080.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS30 family transposase
SIO_010081: H3M12_RS12165
subclass of: SO_0000673
so part of: H3M12_RS12165
location: 41036..41972
location: region:41036-41972:1
so has part: feature:41036-41972:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41036-41972:1:exon