Desulfobacter hydrogenophilus strain AcRS1 plasmid unnamed2.
Bacteria; Thermodesulfobacteriota; Desulfobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.
Complete genome sequence of Desulfobacter hydrogenophilus AcRS1
Submitted (19-FEB-2019) Center for Geomicrobiology, Aarhus University, Ny Munkegade 114, Aarhus 8000, Denmark
REFSEQ INFORMATION: The reference sequence is identical to\nCP036315.1.\nBacteria and source DNA available from DSMZ\nChromosome and plasmids not circularized.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: FEB-2019\nAssembly Method :: Racon v. FEBRUARY-2019\nGenome Representation :: Full\nExpected Final Version :: Yes\nReference-guided Assembly :: SUB5204593\nGenome Coverage :: 1000.0x\nSequencing Technology :: Oxford Nanopore; Illumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/11/2023 02:39:00\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,628\nCDSs (total) :: 4,560\nGenes (coding) :: 4,507\nCDSs (with protein) :: 4,507\nGenes (RNA) :: 68\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 49\nncRNAs :: 4\nPseudo Genes (total) :: 53\nCDSs (without protein) :: 53\nPseudo Genes (ambiguous residues) :: 0 of 53\nPseudo Genes (frameshifted) :: 10 of 53\nPseudo Genes (incomplete) :: 40 of 53\nPseudo Genes (internal stop) :: 12 of 53\nPseudo Genes (multiple problems) :: 8 of 53\nCRISPR Arrays :: 5\n##Genome-Annotation-Data-END##
type strain of Desulfobacter hydrogenophilus
COORDINATES: protein motif:HMM:NF013235.2
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF015397.2
COORDINATES: similar to AA sequence:RefSeq:WP_008278942.1
MobC family plasmid mobilization relaxosome protein
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.