Streptomyces avermitilis MA-4680 = NBRC 14893 plasmid SAP1, complete sequence.
Streptomyces avermitilis MA-4680 = NBRC 14893
Bacteria; Actinomycetota; Actinomycetes; Kitasatosporales; Streptomycetaceae; Streptomyces.
Complete genome sequence and comparative analysis of the industrial microorganism Streptomyces avermitilis
Submitted (15-AUG-2002) Contact:Haruo Ikeda Kitasato University, Kitasato Institute for Life Sciences; 1-15-1 Kitasato, Sagamihara, Kanagawa 228-8555, Japan
REFSEQ INFORMATION: The reference sequence is identical to\nAP005645.1.\nOur web site\nURL:http://avermitilis.ls.kitasato-u.ac.jp.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/09/2023 05:06:03\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 8,036\nCDSs (total) :: 7,938\nGenes (coding) :: 7,617\nCDSs (with protein) :: 7,617\nGenes (RNA) :: 98\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 77\nncRNAs :: 3\nPseudo Genes (total) :: 323\nCDSs (without protein) :: 321\nPseudo Genes (ambiguous residues) :: 0 of 323\nPseudo Genes (frameshifted) :: 143 of 323\nPseudo Genes (incomplete) :: 241 of 323\nPseudo Genes (internal stop) :: 29 of 323\nPseudo Genes (multiple problems) :: 87 of 323\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003958353.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003995278.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522993.1
COORDINATES: similar to AA sequence:RefSeq:WP_019329412.1
COORDINATES: similar to AA sequence:RefSeq:WP_011562840.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_019074344.1
COORDINATES: protein motif:HMM:NF040374.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074346.1
COORDINATES: similar to AA sequence:RefSeq:WP_014677426.1
COORDINATES: similar to AA sequence:RefSeq:WP_011039332.1
COORDINATES: similar to AA sequence:RefSeq:WP_016639756.1
endonuclease VII domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003986475.1
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007505422.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024898.2
COORDINATES: similar to AA sequence:RefSeq:WP_019526987.1
COORDINATES: similar to AA sequence:RefSeq:WP_016828477.1
COORDINATES: similar to AA sequence:RefSeq:WP_005477099.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011039364.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011039365.1
COORDINATES: similar to AA sequence:RefSeq:WP_010352583.1
COORDINATES: similar to AA sequence:RefSeq:WP_018893710.1
COORDINATES: similar to AA sequence:RefSeq:WP_020665611.1
COORDINATES: similar to AA sequence:RefSeq:WP_020115022.1
COORDINATES: similar to AA sequence:RefSeq:WP_003979120.1
GO:0004672 - protein kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015449491.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_020126393.1
COORDINATES: similar to AA sequence:RefSeq:WP_018654324.1
COORDINATES: protein motif:HMM:NF017103.2
COORDINATES: similar to AA sequence:RefSeq:WP_019074368.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019074369.1
COORDINATES: protein motif:HMM:NF013540.2
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_019074370.1
COORDINATES: similar to AA sequence:RefSeq:WP_018835802.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074377.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074378.1
COORDINATES: similar to AA sequence:RefSeq:WP_019329442.1
COORDINATES: similar to AA sequence:RefSeq:WP_014677475.1
COORDINATES: similar to AA sequence:RefSeq:WP_014677476.1
COORDINATES: similar to AA sequence:RefSeq:WP_015449476.1
COORDINATES: similar to AA sequence:RefSeq:WP_007504812.1
COORDINATES: similar to AA sequence:RefSeq:WP_011039400.1
COORDINATES: similar to AA sequence:RefSeq:WP_011109703.1
COORDINATES: similar to AA sequence:RefSeq:WP_010988914.1
COORDINATES: similar to AA sequence:RefSeq:WP_007505690.1
COORDINATES: similar to AA sequence:RefSeq:WP_015449470.1
COORDINATES: similar to AA sequence:RefSeq:WP_015449469.1
COORDINATES: similar to AA sequence:RefSeq:WP_015449468.1
COORDINATES: similar to AA sequence:RefSeq:WP_018555001.1
COORDINATES: similar to AA sequence:RefSeq:WP_018555000.1
COORDINATES: similar to AA sequence:RefSeq:WP_014677502.1
COORDINATES: similar to AA sequence:RefSeq:WP_018554998.1
COORDINATES: similar to AA sequence:RefSeq:WP_011039410.1
COORDINATES: similar to AA sequence:RefSeq:WP_014677507.1
COORDINATES: similar to AA sequence:RefSeq:WP_014677509.1
COORDINATES: similar to AA sequence:RefSeq:WP_014677510.1
COORDINATES: similar to AA sequence:RefSeq:WP_014677511.1
COORDINATES: similar to AA sequence:RefSeq:WP_018569230.1
COORDINATES: similar to AA sequence:RefSeq:WP_018552842.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009062422.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015449455.1
COORDINATES: similar to AA sequence:RefSeq:WP_014668683.1
COORDINATES: protein motif:HMM:NF015620.2
COORDINATES: similar to AA sequence:RefSeq:WP_014677516.1
COORDINATES: similar to AA sequence:RefSeq:WP_018523014.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_018523015.1
COORDINATES: similar to AA sequence:RefSeq:WP_003954287.1
COORDINATES: similar to AA sequence:RefSeq:WP_018523477.1
COORDINATES: similar to AA sequence:RefSeq:WP_005318981.1
COORDINATES: similar to AA sequence:RefSeq:WP_020422553.1
GO:0016853 - isomerase activity [Evidence IEA]
GO:0006725 - cellular aromatic compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014670177.1
COORDINATES: similar to AA sequence:RefSeq:WP_015449443.1
COORDINATES: protein motif:HMM:NF025186.2
COORDINATES: similar to AA sequence:RefSeq:WP_005477040.1
COORDINATES: similar to AA sequence:RefSeq:WP_019525504.1
COORDINATES: similar to AA sequence:RefSeq:WP_003964008.1
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_019525502.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074445.1
COORDINATES: similar to AA sequence:RefSeq:WP_014677552.1
COORDINATES: similar to AA sequence:RefSeq:WP_018845176.1
COORDINATES: protein motif:HMM:NF015272.2
GO:0020037 - heme binding [Evidence IEA]; GO:0004833 - tryptophan 2,3-dioxygenase activity [Evidence IEA]
GO:0019441 - tryptophan catabolic process to kynurenine [Evidence IEA]
tryptophan 2,3-dioxygenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008749773.1