Runella rosea strain HYN0085 plasmid unnamed4, complete sequence.
type: Entry
definition: Runella rosea strain HYN0085 plasmid unnamed4, complete sequence.
sequence version: NZ_CP030854.1
sequence date: 2022-10-06
sequence: sequence
division: CON
label: NZ_CP030854.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN09536026
keyword: RefSeq
source: Runella rosea
organism: Runella rosea
taxonomy: Bacteria; Bacteroidota; Cytophagia; Cytophagales; Spirosomaceae; Runella.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP030854.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: PacBio SMRT Analysis v. v2.3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 221.79x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 10/05/2022 20:30:59\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 5,939\nCDSs (total) :: 5,885\nGenes (coding) :: 5,857\nCDSs (with protein) :: 5,857\nGenes (RNA) :: 54\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 43\nncRNAs :: 2\nPseudo Genes (total) :: 28\nCDSs (without protein) :: 28\nPseudo Genes (ambiguous residues) :: 0 of 28\nPseudo Genes (frameshifted) :: 12 of 28\nPseudo Genes (incomplete) :: 19 of 28\nPseudo Genes (internal stop) :: 2 of 28\nPseudo Genes (multiple problems) :: 4 of 28\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 57835
topology: linear
so has quality: SO_0000987
location: 1..57835
location: region:1-57835:1
RO_0002162: 2259595

NZ_CP030854
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN09536026
type: BioSample
SIO_000068: biosample

1
title: Genome sequencing of Runella
author: Baek, M.-G.
author: Yi, H.
journal: Unpublished

2
title: Direct Submission
author: Baek, M.-G.
author: Yi, H.
journal: Submitted (05-JUL-2018) College of Health Science, Korea University, Anam-ro 145, Seoul 02841, South Korea

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57835:1
position: 57835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition
type: FuzzyPosition

feature:1-57835:1:source
so part of: sequence
organism: Runella rosea
mol type: genomic DNA
strain: HYN0085
isolation source: fresh water
type material: type strain of Runella rosea
plasmid: unnamed4
country: South Korea
collection date: 2017-05

2259595
type: Taxonomy
SIO_000068: taxonomy

DR864_RS29125
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29125
old locus tag: DR864_29115
so part of: sequence
location: complement(<1..1690)
location: region:1-1690:-1
so has part: feature:1-1690:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:1690:-1
position: 1690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1690:-1:exon

DR864_RS29125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29125
old locus tag: DR864_29115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020607390.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TonB-dependent receptor plug domain-containing protein
translation: MKKNLLQSGLLLLFGWFITLSTLAQSNIVTGKITSVTGEAIPGVNVLVKGTNTGTTTDANGVYKINSVSNTSLLTFSAIGFVLQEIKVGNRSTIDIVLQEDTKMLSEVVVTALGIKREEKSLGFAAQTINANAVVDAKSNNWVNTLSGKVAGLNIQGVGGGPMGSSRITLRGESSLNLENNQALIVVDGVPISSKITSTGFNSHLSADSPIDYGSTVSDLNPDDIEKVTVLKGPGATALYGSRAAGGALIITTKTGARKDRGIGVTFNTNFNIEQVNRWPDYQFEYGEGRTDAYYSYLNSADGINTSTTAAAGRAWGPKFNGQSYFQYNPDAPDGRPTERTPWVPHKDYISGYFQTGRTFSNSLSLEGGTEKGSARFSFTHLKNEWIVPNTGFERINAALSVNQQLSSKLKIMGKANYTNKRSDNLPAAGYNNQSLMYFVIIGPAPNVKPEWYKPYWQPGLEGIQQRNPFNPGPDNPYLDMYEMLNKLNKHGLIGTISANYELSKKLELMVRTGVDMSFEYRSQQRPFSMTKYPRGMFREQNVFSYELNTDFLLTYKDNFTNK
SIO_010081: DR864_RS29125
subclass of: SO_0000673
so part of: DR864_RS29125
location: complement(<1..1690)
location: region:1-1690:-1
so has part: feature:1-1690:-1:exon

WP_162794292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-1690:-1:exon

DR864_RS29130
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29130
old locus tag: DR864_29120
so part of: sequence
location: complement(2000..2932)
location: region:2000-2932:-1
so has part: feature:2000-2932:-1:exon
subclass of: SO_0000010

position:2000:-1
position: 2000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2932:-1
position: 2932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2000-2932:-1:exon

DR864_RS29130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29130
old locus tag: DR864_29120
inference: COORDINATES: protein motif:HMM:NF014686.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-grasp domain-containing protein
translation: MKLLYLYSDSDFTPWRENINAATIASLIQATPDNVQTFVTHFVGFTAEFADFLRQFDLIFNVCYGYGVADQVEVVRWLDWHGIKHTASSYSTQLLAMDKALLPDMCMQVGVNTPRILLPNELFEFSSTTTFIAKHRYGSLHRNMLFFKKDNIPSQQLNSLESYIIQPYIEGREFTVAVIPDKNGLNPECLPPLEIIPNDGRAIYVAGQNYGPTYKDFQPQLDEHLYDMMTEGVLELHKLLEIKGMSRTDIRIANDEVYILDINTMPNLDPQRSYLPALANHHRIQLRELIERTIKSALIWYERQLVQQPD
SIO_010081: DR864_RS29130
subclass of: SO_0000673
so part of: DR864_RS29130
location: complement(2000..2932)
location: region:2000-2932:-1
so has part: feature:2000-2932:-1:exon

WP_114070670.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2000-2932:-1:exon

DR864_RS29135
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29135
old locus tag: DR864_29125
so part of: sequence
location: 3275..3565
location: region:3275-3565:1
so has part: feature:3275-3565:1:exon
subclass of: SO_0000010

position:3275:1
position: 3275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3565:1
position: 3565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3275-3565:1:exon

DR864_RS29135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29135
old locus tag: DR864_29125
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSKIKAQASEIAKKIADVMIEEATSKKIKKAVNKTSEKLAKRIVKIKQKEAKEKDKVEKKAEKKVLKAAKKVSQEKKVKKVAKVSKKNEDATPIA
SIO_010081: DR864_RS29135
subclass of: SO_0000673
so part of: DR864_RS29135
location: 3275..3565
location: region:3275-3565:1
so has part: feature:3275-3565:1:exon

WP_114070671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3275-3565:1:exon

DR864_RS29140
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29140
old locus tag: DR864_29130
so part of: sequence
location: complement(3700..5232)
location: region:3700-5232:-1
so has part: feature:3700-5232:-1:exon
subclass of: SO_0000010

position:3700:-1
position: 3700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5232:-1
position: 5232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3700-5232:-1:exon

DR864_RS29140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29140
old locus tag: DR864_29130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008512042.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RagB/SusD family nutrient uptake outer membrane protein
translation: MKTIRNSILCLCLTLGAMSCNDNFLVETDPNSVATSNYFKNENDVLLAVNGAYQALRNNNGLAEGSMLYSEERSDNTGRNDNQSNAGEPFQFNDFSLLPSNTYLKTHWLALYQIITRTNLVLDGIEKVTFSNATTKAQYQAEAKFIRALVYFHLVRKWGDVPLVIKPLSSSDEVKANTAREKKDKVYAQIVADLTDVVNSSLPDHQPVANKGRVSKVAGMALLGQVYLTMATTLDAANRTTNLNQAKTYLTGAYEKRTFGLLKEIAYTDVFDVAKKSTNPEIIFQIVYKQGDINYASNIAVSTQAQGENINSLRTTTGTGGNVTPDLVKEYEEGDLRKDFSIKYANAANVKDYFITKYRDVSAAAGANGYGGNDWILMRYADVILMLAEVNLYLGNDAAAIGFLNQVRERAKMPLYEVAKEAPAYKAKFPTLKMAILHERRIELAFENHRWFDLLRFFTPAELVTYMGTKLQADFGAAKISNFGLKDYYYPIPFDEFKLDPVKMYQNEGY
SIO_010081: DR864_RS29140
subclass of: SO_0000673
so part of: DR864_RS29140
location: complement(3700..5232)
location: region:3700-5232:-1
so has part: feature:3700-5232:-1:exon

WP_114070672.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3700-5232:-1:exon

DR864_RS29145
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29145
old locus tag: DR864_29135
so part of: sequence
location: complement(5261..8569)
location: region:5261-8569:-1
so has part: feature:5261-8569:-1:exon
subclass of: SO_0000010

position:5261:-1
position: 5261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8569:-1
position: 8569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5261-8569:-1:exon

DR864_RS29145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29145
old locus tag: DR864_29135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020597686.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TonB-dependent receptor
translation: MNIYKTPTKSWMCFCILFLGLTFLHQFPASATKLQQAIKVTGIITDEANQPLPGVSIVEKQTRKGTVSDEQGKFSLDVSTEAVLVISSVGFVPQEVVINGQTSLTIKLKEDINMLNEVVAVGYQILRKSDVTGAISNVKARELNLAAPTLGQALVGKLAGVQVSQVSGAPYVSTKIRVRGIGSINASSDPLYVIDGFPAGNDVFINPNDIESIDILKDAASAAIYGSRASGGVVIITTKRGKEGNGKMEYDYQYGVHQLAKKVKLLNSEQFAQLLIDARNNTYRDLYENSGKTWNNSMYSDDNATRVSKVGNASAVSIPTDIYDFANQKLIAPKYNTDWQNELYRNAPVSRHNLTFSGGNKGGRYLVSLGYQNQQGIIVATKQERLNFRVNVDGDLTEKLKVGASIFVTSTNGREVQEGRFNQGVVLGALIYPPTFRAYDDNGVLLKNQVAAQQPTFGYQTVENPVALALETNINRRGLRANYNGNLTYELLPGLSAKANIGLQTYNEKYEYYLPTSLSSGNNPPYSTQSYAAARATAQTLATTNLLGEFTANYTKQFGEHGINLLAGYTAQKYNSDLISVSAQGFQNDLIQEITAKGADPANFFLNGGTGKVEETLLSYLARAEYRFASRYYITAAFRRDGSSRFGPLNRWGAFPSVSAGWNISEESFYNNMLGEASTLKLRASWGLTGNYNIGNYNYLQTMANPSGTVFGNGTINTAVWAGPIKDQRLGWESTSQYNVGLDVGLLRNRLSFIFNAYLSNSYNLLFNQPVSAISGTSTILTNLRDSKVQNKGVELQIDGRLVSTKEFKLNLSGNISFNRNKVLNMGGANTIITNGAERSYLTHITQEGQPIGMFYGFKVIGMVREKDMENIAVDNANYNASKQSFPAGYVLKGPARSTASSNPLRPGDLIFEDVNKDGVVNDADKQVIGTPYPKFTYGFSLNASYRDFDLGAAFNGVYGNQVLDGQDYYVYNMEASGNQYVDVINRYRSEAEPGNGLVYRAARGGTQSNSTRLSTFYLQSGSFFRCTNLSLGYNLPTKWLGKWKVEGLRVYANVNNAFTMTKYKGYNPEVDYNGGANLTPGVDYGMYPLARAYNIGAKLTF
SIO_010081: DR864_RS29145
subclass of: SO_0000673
so part of: DR864_RS29145
location: complement(5261..8569)
location: region:5261-8569:-1
so has part: feature:5261-8569:-1:exon

WP_114070673.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5261-8569:-1:exon

DR864_RS29150
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29150
old locus tag: DR864_29140
so part of: sequence
location: complement(8631..9494)
location: region:8631-9494:-1
so has part: feature:8631-9494:-1:exon
subclass of: SO_0000010

position:8631:-1
position: 8631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9494:-1
position: 9494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8631-9494:-1:exon

DR864_RS29150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29150
old locus tag: DR864_29140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008512049.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIVITIVSAMAVLFLGTADMEVKIVASTTIDSLGACQGVSYLLGKVYLYGDREVGMIRTYALNSNQLIYTGQEIKLTQNGQDVINHPTGIAHNGSKHTFVGNSIRLNPEGTQWKAVIYAVDWEGLQRTKTLDGNLLNVIEDDICIQGTRPEYVQYEGKWYVATADYGPKSNEVRLYDPQILSKAKKTSEAGVLFKKFSCSAWVQNLHWIPSKGILVLIQNQIEGRKWRFTFIDLKKSVASGQQQVLNVVDIDKSDELEGFTLLEGSSTGMAVTSSRHQNVHLVTVK
SIO_010081: DR864_RS29150
subclass of: SO_0000673
so part of: DR864_RS29150
location: complement(8631..9494)
location: region:8631-9494:-1
so has part: feature:8631-9494:-1:exon

WP_205319312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8631-9494:-1:exon

DR864_RS29155
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29155
old locus tag: DR864_29145
so part of: sequence
location: complement(10124..10441)
location: region:10124-10441:-1
so has part: feature:10124-10441:-1:exon
subclass of: SO_0000010

position:10124:-1
position: 10124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10441:-1
position: 10441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10124-10441:-1:exon

DR864_RS29155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29155
old locus tag: DR864_29145
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAVSAPPKKKVPETPPVVSEEEITKVINKGGSPVNKLAKTRTRDKTKPIRAIAVSLTSEEIDSIISLRNQRPSPSRTKKIPISLHDWILEAVQEKIERERKKYQM
SIO_010081: DR864_RS29155
subclass of: SO_0000673
so part of: DR864_RS29155
location: complement(10124..10441)
location: region:10124-10441:-1
so has part: feature:10124-10441:-1:exon

WP_114070674.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10124-10441:-1:exon

DR864_RS29160
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29160
old locus tag: DR864_29150
so part of: sequence
location: complement(10496..11155)
location: region:10496-11155:-1
so has part: feature:10496-11155:-1:exon
subclass of: SO_0000010

position:10496:-1
position: 10496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11155:-1
position: 11155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10496-11155:-1:exon

DR864_RS29160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29160
old locus tag: DR864_29150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013768971.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MIITVGGIKGGSGKTTVATNLAIYISQRGGDVLLVDADDQETATDFTAWREETKMGEVGYTAVKLTGDQVRTQVAKLKSKYQYVVIDTGGRDTTSQRAALFISDIYLLPFNPRSFDVWTVGKVEKLIMEIRAVRPAELLAFSFINRADARGSDNNDAAELLAQSEVMEYLEMPLGNRKAFSHAAAKGLGVTELLPVDEKAVNELTSLFNKVLSHTNALI
SIO_010081: DR864_RS29160
subclass of: SO_0000673
so part of: DR864_RS29160
location: complement(10496..11155)
location: region:10496-11155:-1
so has part: feature:10496-11155:-1:exon

WP_114070675.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10496-11155:-1:exon

DR864_RS29165
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29165
old locus tag: DR864_29155
so part of: sequence
location: 12116..13573
location: region:12116-13573:1
so has part: feature:12116-13573:1:exon
subclass of: SO_0000010

position:12116:1
position: 12116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13573:1
position: 13573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12116-13573:1:exon

DR864_RS29165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29165
old locus tag: DR864_29155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015026408.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MAKKELPKRRKQDLQERYTIRIQGGKSGLVEATSKMDIHEFRVFATMLTMVLPEDEDFTTYELRVQDIIKLFSLKKDGRYYELVRDAAHKLLDRKFVIYEMKNGEEYKTTINLITETSEPVSEINKNHILLQFSPKLKPYLLQLKKEYLTIDIRNIQDISSPYSVKLYMVLKHQQRLGNYKVKYPIERLRQILAIEEGEYGLYGSFKQQVIRRTLSDIEKYTDLSVLKIEEEKAGRSVSAIIFHVVEKEAQRQNEIKIKKQQHNILKKSDGRVVVGEDGEKEPISFETAEVINVKGVQLNEIENVFQKVRKYKIAKATVRQWFNEFPIEQITLGIDHVLSEVKVGKEIKNIGGYINQMVKTSSLFEVAQEQKTEQERKRMQQQEKQQQEKTLNEQVNSLKIQAHNMRLEVLAELVQNQEIKQALIDKFSVGLFKTYYKPSLGFEENIKNPAVAGFMIATAGQLYPERFVEAEQLVKRAEALERGR
SIO_010081: DR864_RS29165
subclass of: SO_0000673
so part of: DR864_RS29165
location: 12116..13573
location: region:12116-13573:1
so has part: feature:12116-13573:1:exon

WP_114070676.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12116-13573:1:exon

DR864_RS29170
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29170
old locus tag: DR864_29160
pseudo: true
so part of: sequence
location: 14102..>15094
location: region:14102-15094:1
so has part: feature:14102-15094:1:exon
subclass of: SO_0000010

position:14102:1
position: 14102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15094:1
position: 15094
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14102-15094:1:exon

DR864_RS29170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29170
old locus tag: DR864_29160
inference: COORDINATES: protein motif:HMM:NF025019.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-binding protein
SIO_010081: DR864_RS29170
subclass of: SO_0000673
so part of: DR864_RS29170
location: 14102..>15094
location: region:14102-15094:1
so has part: feature:14102-15094:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14102-15094:1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 2259595
inference: COORDINATES: alignment:crt:1.2
inference: COORDINATES: alignment:pilercr:v1.02
rpt family: CRISPR
rpt type: direct
rpt unit range: 15327..15356
rpt unit seq: atttcaattccactgaggtacgattaaggg
so part of: sequence
location: 15262..15687
location: region:15262-15687:1
so has part: feature:15262-15687:1:region

position:15262:1
position: 15262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15687:1
position: 15687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15262-15687:1:region

DR864_RS29175
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29175
old locus tag: DR864_29165
so part of: sequence
location: complement(15727..16401)
location: region:15727-16401:-1
so has part: feature:15727-16401:-1:exon
subclass of: SO_0000010

position:15727:-1
position: 15727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16401:-1
position: 16401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15727-16401:-1:exon

DR864_RS29175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29175
old locus tag: DR864_29165
inference: COORDINATES: protein motif:HMM:NF013753.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MSRRTVAKYWNRIEFVPKASRKRSNILDFENYLQQRWQEGQQSAKALYEEISDKGFTYSQATVYNMVRKYPKSVLEPLPASVKATYYSSKQLSIWLGMYQNDWEDYMPIEFLRKLLEENPLIKAVREIALEFRQLMKAKQGNQLQDWCNKALDSGVEALKGFVRGVKQDFKAIFQAFTSEWSNGQVEGQVNRLKNIKRQMYGRASFELLRKRVIMMGIPDFHQM
SIO_010081: DR864_RS29175
subclass of: SO_0000673
so part of: DR864_RS29175
location: complement(15727..16401)
location: region:15727-16401:-1
so has part: feature:15727-16401:-1:exon

WP_114070677.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15727-16401:-1:exon

DR864_RS29185
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29185
old locus tag: DR864_29175
so part of: sequence
location: complement(16890..17393)
location: region:16890-17393:-1
so has part: feature:16890-17393:-1:exon
subclass of: SO_0000010

position:16890:-1
position: 16890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17393:-1
position: 17393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16890-17393:-1:exon

DR864_RS29185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29185
old locus tag: DR864_29175
inference: COORDINATES: protein motif:HMM:NF026041.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase family protein
translation: MDSSFLLPSELDLELLDYELYPDRIDLQVISTASSTCCPVCGHLSHKIHSCYHRIIHDLPASGRRVRLQLQVRKYFCKNTDCPRLIFTERFVTGLASYARRFDRLNQVLTGMGLESGGNPSTRQARYFSVKVSASTVLRLIKKCNMPSITAPKIIGVDDCRAAVAGV
SIO_010081: DR864_RS29185
subclass of: SO_0000673
so part of: DR864_RS29185
location: complement(16890..17393)
location: region:16890-17393:-1
so has part: feature:16890-17393:-1:exon

WP_114070678.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16890-17393:-1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 2259595
inference: COORDINATES: alignment:crt:1.2
inference: COORDINATES: alignment:pilercr:v1.02
rpt family: CRISPR
rpt type: direct
rpt unit range: 17500..17536
rpt unit seq: gtttcaatccttattctgctggaatgtgctctgaaag
so part of: sequence
location: 17500..20334
location: region:17500-20334:1
so has part: feature:17500-20334:1:region

position:17500:1
position: 17500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20334:1
position: 20334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17500-20334:1:region

DR864_RS29190
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
gene: cas4
locus tag: DR864_RS29190
old locus tag: DR864_29180
so part of: sequence
location: complement(20541..21113)
location: region:20541-21113:-1
so has part: feature:20541-21113:-1:exon
subclass of: SO_0000010

position:20541:-1
position: 20541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21113:-1
position: 21113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20541-21113:-1:exon

DR864_RS29190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
gene: cas4
locus tag: DR864_RS29190
old locus tag: DR864_29180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020602102.1
GO function: GO:0004518 - nuclease activity [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated protein Cas4
translation: MTLTPSHIIEYLYCPRFTYFEYVLAIPQYEEKNYKVMRGRELHDLKLEQNKDYLRRRIGAVSKHIDQYLTNDIIRGRVDEVLGLSNGTMVPLDYKFAEYKDRVYETYRTQLYCYAWLIEENFGHKVEKGFLVYTRSRNKLIEVPITEENKQEVKDTAKAIGRIIEDNFFPKATKYKARCVGCTYRNMCIR
SIO_010081: DR864_RS29190
subclass of: SO_0000673
so part of: DR864_RS29190
location: complement(20541..21113)
location: region:20541-21113:-1
so has part: feature:20541-21113:-1:exon

WP_114070679.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20541-21113:-1:exon

DR864_RS29195
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
gene: cas2
locus tag: DR864_RS29195
old locus tag: DR864_29185
so part of: sequence
location: complement(21113..21403)
location: region:21113-21403:-1
so has part: feature:21113-21403:-1:exon
subclass of: SO_0000010

position:21403:-1
position: 21403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21113-21403:-1:exon

DR864_RS29195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
gene: cas2
locus tag: DR864_RS29195
old locus tag: DR864_29185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018621545.1
GO function: GO:0004521 - endoribonuclease activity [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated endonuclease Cas2
translation: MIIWVLYDIEKDKSRTKVSKLCEQAGLYRVQYSCFLGTLTANEKDTLRLQIEALIDEEKDKVYIFPMSKDELRNTDLLGQAFDKDLVTDQIRALFF
SIO_010081: DR864_RS29195
subclass of: SO_0000673
so part of: DR864_RS29195
location: complement(21113..21403)
location: region:21113-21403:-1
so has part: feature:21113-21403:-1:exon

WP_114070680.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21113-21403:-1:exon

DR864_RS29200
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
gene: cas1
locus tag: DR864_RS29200
old locus tag: DR864_29190
so part of: sequence
location: complement(21449..22438)
location: region:21449-22438:-1
so has part: feature:21449-22438:-1:exon
subclass of: SO_0000010

position:21449:-1
position: 21449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22438:-1
position: 22438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21449-22438:-1:exon

DR864_RS29200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
gene: cas1
locus tag: DR864_RS29200
old locus tag: DR864_29190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019989962.1
GO function: GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated endonuclease Cas1
translation: MHLHINTYGTYVHVKDDMFEIRKKAENGELEKKHFSANKVEGIILATGSALSTDAIKLAMMHNVDILFIEQNGEPIGRVWHAKLGSTTKIRKRQLEASLDNVGVKWTKTWLLTKLDNQLNFIKDLKKHRPQHADFLNDKITRIEALSVSISSLEARKVSEIADTLRGLEGTAGRLYFETLSYVFPKEYAFNGRSSRPAKDAFNAFLNYAYGILYGKIEKALIVAGVDPYVGFMHRDDYNQLSMVFDFIEPYRAFADEVVFRLFSAKKVNKSHVDELQNGMSLNKTGKELLVLAFTKFMDDDPIKHKGCNLVRSHVIQADAHSFANALIA
SIO_010081: DR864_RS29200
subclass of: SO_0000673
so part of: DR864_RS29200
location: complement(21449..22438)
location: region:21449-22438:-1
so has part: feature:21449-22438:-1:exon

WP_114070681.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21449-22438:-1:exon

DR864_RS30020
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS30020
so part of: sequence
location: complement(22449..22625)
location: region:22449-22625:-1
so has part: feature:22449-22625:-1:exon
subclass of: SO_0000010

position:22449:-1
position: 22449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22625:-1
position: 22625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22449-22625:-1:exon

DR864_RS30020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS30020
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MELKRIKNDAEYGTMMEWINEQFDNKPALDSPQGDFLQVALLSVKAYEDAHYQIPGSA
SIO_010081: DR864_RS30020
subclass of: SO_0000673
so part of: DR864_RS30020
location: complement(22449..22625)
location: region:22449-22625:-1
so has part: feature:22449-22625:-1:exon

WP_162794294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22449-22625:-1:exon

DR864_RS29205
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29205
old locus tag: DR864_29195
so part of: sequence
location: complement(22661..23326)
location: region:22661-23326:-1
so has part: feature:22661-23326:-1:exon
subclass of: SO_0000010

position:22661:-1
position: 22661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23326:-1
position: 23326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22661-23326:-1:exon

DR864_RS29205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29205
old locus tag: DR864_29195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019989963.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated endonuclease Cas6
translation: MTLPLTTVTFPEIPLRTRDAHKLRGYFGDFFKEHSPLLHNHYEDGSLRYAYPLVQYKVLNRVPTLVGLGEGAQLLVELFLRIRALDIDGRKIEVLSKHIDHQQAAVEVGSALVKYRFETLWMPLNQENHREYLSADDKTRQELLQRILQNNILAFLKGAGAYQPDLPRLMLLLNVQAQTTTQFKNQTMLAFTGDFVVNATLPNGIGLGKSVARGFGSIVRQ
SIO_010081: DR864_RS29205
subclass of: SO_0000673
so part of: DR864_RS29205
location: complement(22661..23326)
location: region:22661-23326:-1
so has part: feature:22661-23326:-1:exon

WP_114070682.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22661-23326:-1:exon

DR864_RS29210
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
gene: cas3
locus tag: DR864_RS29210
old locus tag: DR864_29200
so part of: sequence
location: complement(23338..25695)
location: region:23338-25695:-1
so has part: feature:23338-25695:-1:exon
subclass of: SO_0000010

position:23338:-1
position: 23338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25695:-1
position: 25695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23338-25695:-1:exon

DR864_RS29210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
gene: cas3
locus tag: DR864_RS29210
old locus tag: DR864_29200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012930468.1
GO function: GO:0004386 - helicase activity [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated helicase Cas3'
translation: MKDNFLPHILAKSKPEDNPETLVQHTDKLIDAWSELRKRYDSVLNKDERFWFDSFIAIIFHDFGKLSQNFQEVLRKALKRKALYKLEPLRHEFLSGMLLAYHTVVEFRKCQDLQPNYSQLFAVLTHHKNFTTSLFDGDKFVKWTIHQADFEEFIEYAKARITEHFTNQGVYLQDISYAWRILSENQENLELQYSDKDDIVEETTFGFKNSGGYEHRFDYILHKSILVASDWSASGHRNLEEPLSYTHQNIFDKVKTRVGERFKGFRQFQNISSQTKGNVLAIAPTGSGKTEASLLWAADRHHDFQRIVYLLPTRVTANALYKRMDNYFGKASNGKDDYVAVVHSSAKLFRQELDEKYDDFSYLRESSFFKSVTVGTVDQMLTQGFNVGWWELKTFHLFRAKVIIDEVHAYAPYTLGLIISSIQYLRKNFQTEFYIMTATMPSQLRDLLTEALGGKENVTLIPDNELLNKKGRNEFRILDKSVTIDTLKPEIEERLKKGKKILLVANTVDEAIRLYDAYKGFDRLCYHSRYIVKHRTEKERLIEQYETDKEGEGFLLIATQVVEVSLDIDYDYLYTENAPIDAIIQRAGRINRKRDESKETEIIVFWHREVSEKIYEDAEIPLKVLETTYNKLRERVEQKKRLSEQDLIDLVEKVYCNWKIETHPSYQKGLKKHEEIIKNFCAYVMDFDEDKENVLTREGLDTVTIIPWCFKDMLKDANSKEKSKYEVSIQKKVYQIVRGKVKRFTDNDGFEYLNVPYSFKKGVSFSKKEIEALNPKGEDKLAFCF
SIO_010081: DR864_RS29210
subclass of: SO_0000673
so part of: DR864_RS29210
location: complement(23338..25695)
location: region:23338-25695:-1
so has part: feature:23338-25695:-1:exon

WP_114070683.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23338-25695:-1:exon

DR864_RS29215
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29215
old locus tag: DR864_29205
so part of: sequence
location: complement(25692..26399)
location: region:25692-26399:-1
so has part: feature:25692-26399:-1:exon
subclass of: SO_0000010

position:25692:-1
position: 25692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26399:-1
position: 26399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25692-26399:-1:exon

DR864_RS29215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29215
old locus tag: DR864_29205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012930467.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CRISPR-associated protein Cas5
translation: MLHCVIEIRSVTASFRNPEFQNFHKSFRLPPPTTLIGLAGAALGLSPKSAQDFFEKDSFRAGVRGIASGMARDLWKYDTLPGRSVITREILMDTHYWIVFGCESQETIHQIKAAFDNPVFALTMGSSDSLAKIVKTELIESESESNELENALVEDDIIPLVLAQALKGGEFSFGVNDSDPIAYQLPTRFAYESDYGVRKIAARKLFSFIGPKVTFKDEVFRGVHFGDVFIPTFTL
SIO_010081: DR864_RS29215
subclass of: SO_0000673
so part of: DR864_RS29215
location: complement(25692..26399)
location: region:25692-26399:-1
so has part: feature:25692-26399:-1:exon

WP_114070684.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25692-26399:-1:exon

DR864_RS29220
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
gene: cas7i
locus tag: DR864_RS29220
old locus tag: DR864_29210
so part of: sequence
location: complement(26412..27296)
location: region:26412-27296:-1
so has part: feature:26412-27296:-1:exon
subclass of: SO_0000010

position:26412:-1
position: 26412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27296:-1
position: 27296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26412-27296:-1:exon

DR864_RS29220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
gene: cas7i
locus tag: DR864_RS29220
old locus tag: DR864_29210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009781475.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I-B CRISPR-associated protein Cas7/Cst2/DevR
translation: MKTNSLTITYLAKVSFASLNGGDKEVDNINTIKKVTLENGDQLPYMSAQAVRRALRDKLQELGWSVSPVGESSEDKGAAKTAGEGGKFIDDDLFGFMDAAKAGTFVRTSPVRVEALLALNKFQEDLDFGTNYMAKDSGGNPNIFETEIHSGIYRGTILIELDRVGEELKGAGKKEFSITNEDKATRVNALIDAFQMLWSSGRQSRFLADISPKFVAAALMKSKNPIFLETLKIKRDGQVDIEALKSVTNDYAPFIDQSVFATQEGVFTKNDDTVVSLGEGFATMKGWVNSYYGV
SIO_010081: DR864_RS29220
subclass of: SO_0000673
so part of: DR864_RS29220
location: complement(26412..27296)
location: region:26412-27296:-1
so has part: feature:26412-27296:-1:exon

WP_114070685.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26412-27296:-1:exon

DR864_RS29225
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29225
old locus tag: DR864_29215
so part of: sequence
location: complement(27293..29059)
location: region:27293-29059:-1
so has part: feature:27293-29059:-1:exon
subclass of: SO_0000010

position:27293:-1
position: 27293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29059:-1
position: 29059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27293-29059:-1:exon

DR864_RS29225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29225
old locus tag: DR864_29215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012930465.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKIEFPYCNNVFLDNGIIGLYKYLLKDESLEKGTHFDLEEKRLWVEHDALFELLERTYYTMGREVYDTYTQKQEDEKGNLYFRVNNKMEMIGEPVSFPKMNTYGFTELLTNNAQGVTTKETNTLKFAEIEKKYPALSVQIKDEFEQRKVKLLSKIYLNERYTKLTRLETPTKAHFDEGSQTCYLTGNKRKKLVDAQNISPFFSGLTNFNSLLSTNDKKICWEALYLSRFSAVTSLYQYPNKLRDALNVYFVFSNNLLNLDFLISQRFMSLIKDQDSLKINEYLANFPRSEEDKKDIYLGKSNDFVGVNETLFFLIHCLYKEVLRTKPQINQSEFRRTIRNKPVGLVSIRAEAFASTMRPKQFEYVTHFSFVTELLYHLEKGGVNWRDIVQSLKILKPSLGQNKNRYELERQFRELVLGKVIKAKSILVDMEGFFDDCYGYLLDSLNDPLKAIGYKRYNDLLDFVTLYERIINHKIMTDKELQEKAIKLGAQIGQGILSYGETPERKTNARQGRKYIISLRKANQYDRFLQELARIQSRFTLNYSRDFLDSIDEERFQWVRQFVIISALNQINVELSPRKQDSNQSTK
SIO_010081: DR864_RS29225
subclass of: SO_0000673
so part of: DR864_RS29225
location: complement(27293..29059)
location: region:27293-29059:-1
so has part: feature:27293-29059:-1:exon

WP_114070712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27293-29059:-1:exon

DR864_RS29230
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29230
old locus tag: DR864_29220
so part of: sequence
location: complement(29782..30966)
location: region:29782-30966:-1
so has part: feature:29782-30966:-1:exon
subclass of: SO_0000010

position:29782:-1
position: 29782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30966:-1
position: 30966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29782-30966:-1:exon

DR864_RS29230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29230
old locus tag: DR864_29220
inference: COORDINATES: protein motif:HMM:NF025019.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MIERSAKFHIEQSLDIFPAVGIVGARQVGKTTLAKVIGQESQKEVIYLDLEDFRDYQRIEVDPLLFFEQHQDKTIIIDEVQRMMTLFPMLRSAIDRYRVPARFILLGSASPTFLAKSTETLAGRIAYCELTPVSFREAVAFGKTLEQHWTKGGFPTALLLPKDEQWRLWQSNFLKTYVDSDLRLLGLNAQPLTISRLLRVLSTANGKMVSYTDIANVMDLALPTVKNYLDFLENSFIIRRLYPYFTNLGKRLVKTPKLYFRDSGMLHQLLNIGSYTQLLDHIEKGASWEGYVIEQITSQLHESAIPYFYRTQHGAELDLVIEMNNLIVATIEIKLSDSPSLSKGNHQAVVDLKCANNFILTFSAGDYALNSLWHVCDLNTIWKHLDKLGLLHHP
SIO_010081: DR864_RS29230
subclass of: SO_0000673
so part of: DR864_RS29230
location: complement(29782..30966)
location: region:29782-30966:-1
so has part: feature:29782-30966:-1:exon

WP_114070686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29782-30966:-1:exon

DR864_RS29235
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29235
old locus tag: DR864_29225
so part of: sequence
location: complement(31058..31966)
location: region:31058-31966:-1
so has part: feature:31058-31966:-1:exon
subclass of: SO_0000010

position:31058:-1
position: 31058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31966:-1
position: 31966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31058-31966:-1:exon

DR864_RS29235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29235
old locus tag: DR864_29225
inference: COORDINATES: protein motif:HMM:NF024676.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: WYL domain-containing protein
translation: MASFTNDDSSPEQAKIERVLRLISLLKDRKRTVPQLARAVNTSPRSLYRYLKLLEKIGYHLENDEQNRYWIFEGESSKINFTVEETALLRPLLAGLKVSGPLYASIERKIYLTSELVPLASELLDLRRARIVSQLNDAIKDKRRVRLLRYHSSNSNTTTDRLVEPLSFTDDFSTLNAYEPESQKVKTFKVSRMEDLEVLAELQENELPGPEVDIFGWTGPEPIFVELQLTSTAYQLLMEEYPAARPFAGRTSSPPFAFRLGVEVRDFTGIGRFILGLHQNIAVVQPQGLKDYLNGIVAGMRF
SIO_010081: DR864_RS29235
subclass of: SO_0000673
so part of: DR864_RS29235
location: complement(31058..31966)
location: region:31058-31966:-1
so has part: feature:31058-31966:-1:exon

WP_114070687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31058-31966:-1:exon

DR864_RS29240
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29240
old locus tag: DR864_29230
so part of: sequence
location: complement(31985..32599)
location: region:31985-32599:-1
so has part: feature:31985-32599:-1:exon
subclass of: SO_0000010

position:31985:-1
position: 31985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32599:-1
position: 32599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31985-32599:-1:exon

DR864_RS29240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29240
old locus tag: DR864_29230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015031144.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLIGYARVSTKDQNLELQWDALTKAGCEMIFQEKASGIKADRPELEKMMSQLRKGDVICIYKLDRLGRSLKNLLELVAEFEKRGVGLRSLTDSIDTTTPQGRLVLNIFASLAEFERDLIRERTKAGLEAARARGRKGGRRSGLSAEAQKKAMLAEMYYKEEKLGVDEIAKTVGISKMTLYKYLRLRGVKISAYASKINPGPNHP
SIO_010081: DR864_RS29240
subclass of: SO_0000673
so part of: DR864_RS29240
location: complement(31985..32599)
location: region:31985-32599:-1
so has part: feature:31985-32599:-1:exon

WP_114070688.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31985-32599:-1:exon

DR864_RS29245
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29245
old locus tag: DR864_29235
so part of: sequence
location: complement(33010..33570)
location: region:33010-33570:-1
so has part: feature:33010-33570:-1:exon
subclass of: SO_0000010

position:33010:-1
position: 33010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33570:-1
position: 33570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33010-33570:-1:exon

DR864_RS29245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29245
old locus tag: DR864_29235
inference: COORDINATES: protein motif:HMM:NF024436.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRMMNNLIAVVILGTALAGGALAQSPSTGSSIKTEKVQMAVVEFTPEPNASGMTTEAKRQLQASIAFRLMKTNRFHVVDVRHTREASQADLVAVNGASTAAAVRVGKQLGVSYVLTGTVVEYNTKGSATLKTRLVEVATGKVKHTDELSHQSPKEMRTGGDVEMKTYVLLPITLRLAETLTAEIL
SIO_010081: DR864_RS29245
subclass of: SO_0000673
so part of: DR864_RS29245
location: complement(33010..33570)
location: region:33010-33570:-1
so has part: feature:33010-33570:-1:exon

WP_114070689.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33010-33570:-1:exon

DR864_RS29250
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29250
old locus tag: DR864_29240
so part of: sequence
location: complement(33682..34131)
location: region:33682-34131:-1
so has part: feature:33682-34131:-1:exon
subclass of: SO_0000010

position:33682:-1
position: 33682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34131:-1
position: 34131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33682-34131:-1:exon

DR864_RS29250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29250
old locus tag: DR864_29240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002972302.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MNVEVKKLTGDEVEPFIELIHLFRDVLETDMVTKAQPEHLCRLLARSDFIVFVARFANQVIGGLTAYILPQYHSEKPVVYLYDIAVGTTYQGQGVGTKLLTQLMKYCRNLGMEELFVQADREDSQAIDFYRATGGTAIQVIQFTYLLNE
SIO_010081: DR864_RS29250
subclass of: SO_0000673
so part of: DR864_RS29250
location: complement(33682..34131)
location: region:33682-34131:-1
so has part: feature:33682-34131:-1:exon

WP_114070690.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33682-34131:-1:exon

DR864_RS29255
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29255
old locus tag: DR864_29245
so part of: sequence
location: complement(34220..35989)
location: region:34220-35989:-1
so has part: feature:34220-35989:-1:exon
subclass of: SO_0000010

position:34220:-1
position: 34220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35989:-1
position: 35989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34220-35989:-1:exon

DR864_RS29255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29255
old locus tag: DR864_29245
inference: COORDINATES: protein motif:HMM:TIGR04183.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: T9SS type A sorting domain-containing protein
translation: MKAINLLLIGLACLLSVSAVAQKLLPYSFQHQADSSDHKTLRFLTQVTQPNTTFLRLYFTGTQLSEGSYLVLEGADGARQELRKQDLENWHYSSAYFNGQSINVSLFAAPSDRNTVRISEVRVTDPQVGQARNAQRRAKTGGTTVQTTSATSPDLTEYPYSKAVGRFTNGSDSYGTGWIAPNGAIVTSYKVAFQVNSEGYDVIEFNIPASDGATVQHPTPQDQYPVKDWDKNGFKTFAFHGASATEVNSAGWAVLEALPNGTGLRPGERQQEYFRVATNPSNYIIDAMGDVPVDLFHYGNDAYDLLQGKTTYRTLRLTQTALLKQNSYLGLRDGVSTDRDVFVLYNMPFFLQSHEGAPVAYAGSNVAIGVHDDIPEDNPAYGLGFRDDGFRNGLASFFSNNSVYVDPEGLYDPGTGEIHKPFRTENKAASDAPVGAQVYFARGDYYGPSTFNRPMTLRAPVGTVRMGVPFSSARKAAGPTISPQLLAEGSSSSFVRESAEDRQVMASPNPFKEQTEINYPFAVGGPVSVHIFNMAGVPVATFTPNDAASGQKGVQWNGTDRHGMPVPAGLYLVKVNFGNQTYTTKVLKN
SIO_010081: DR864_RS29255
subclass of: SO_0000673
so part of: DR864_RS29255
location: complement(34220..35989)
location: region:34220-35989:-1
so has part: feature:34220-35989:-1:exon

WP_114070691.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34220-35989:-1:exon

DR864_RS29260
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29260
old locus tag: DR864_29250
so part of: sequence
location: complement(36013..37308)
location: region:36013-37308:-1
so has part: feature:36013-37308:-1:exon
subclass of: SO_0000010

position:36013:-1
position: 36013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37308:-1
position: 37308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36013-37308:-1:exon

DR864_RS29260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29260
old locus tag: DR864_29250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009282327.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKYFTNLLTAVSVTSFLFSSNQLLAQWQTQNGNLYVNPPTKVGIGLSNPNRNLDIHSTSDTYLRVSSLGGVSLGSLKASIELRRTANNGTTNTWSINNENHFRIRHDGDLMFALDPHVARLGINLDNPVEFTIYGKNVTKSGNSVLDGALRLHSKVGSNIHMLALDGNQIESSDPLYINNDSEQNVHLANGGGKVKVGTTDNEARLSIASENDMQLKLINPGANGAAWRIGVANSNWSAGAGKLVFSKTSSSDEATMVITPAGNVGIGLTTPSKTLQVNGTTSTKILEITGGSDLAEHFDIEAGETQLPGTVVSIDPNKPGQLRVAKQAYDKTVAGIVSGAGDVQPGMLMGQAGTLASGQHPVALTGRVYCRVDAQYGAIRPGDLLTTSPTPGHAMKATDFGKAQGAILGKAMTSLETGRGLVLVLVSLQ
SIO_010081: DR864_RS29260
subclass of: SO_0000673
so part of: DR864_RS29260
location: complement(36013..37308)
location: region:36013-37308:-1
so has part: feature:36013-37308:-1:exon

WP_114070692.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36013-37308:-1:exon

DR864_RS29265
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29265
old locus tag: DR864_29255
so part of: sequence
location: complement(37868..41134)
location: region:37868-41134:-1
so has part: feature:37868-41134:-1:exon
subclass of: SO_0000010

position:37868:-1
position: 37868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41134:-1
position: 41134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37868-41134:-1:exon

DR864_RS29265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29265
old locus tag: DR864_29255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009282324.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MTLRFWLFLCCLLSTRDTSLLAQSGNTQETVNQQLERAEKLTSSQPEKALVAAKTALTLAQKNKLTLSEGKAYQRLARIYAERDDYVSALNAAKNGLSIFHKLGEQRDVCRMYMAVGVINRYLKLYDASIGANLQALKIAEAQQDTTLLGAIYGNLGNVYFDQKDYDRSLQSGLKALNIQMAQRDSQAIGNTFHNLARIYRIRREFGKAQEFYNKSLAIDLKKGNQLNIGGSYLDLALLYRDMGDFQQALQYTQRTLTIANRIKSKSLQQQALANLPLIYGVLGNPEKAVIALKQYEELNDSLQSAELSRQIADLQASYQGEQKDRELSLQKLRLEAQQASLSRQRTLIVSLIAFVLLGALIGYLLFNRYKLRQRNLKLSLENEQYQLSQSLQRRQDVDETIHYFASSLYGKNTVDEILWDVAKNCIARLGFVDCVIYMLNDEQTALVQKAAYGNKNPEAYSILNPLEIPLGKGIVGSVAQTGKPEIVTDTTQDPRYVVDDEVRLAELTVPLLLQNKVIGVIDSEHPEKGFFKEHHLEALQTIAAICSSKIAQAIADEEAKKAKIMQIEADHIRQLDRVKSQFFANISHEFRTPLQLILAPLQKRGAISPEETHMMERNANRLLRLVNQLLDLAKAEMGMLKLNYQWGNLIGFLYQTARYFEPMAEAKKIQYQIQLPTTEPLMAYDRDKLEKIVYNLLSNAIKFTPVGGQVILQVELEPETGLRLVVRDSGIGIPESHQDRIFDRFFQIDSSQTRAFGGSGLGLALTKELVELYKGSIYVESQPESGSTFVVLLPLAVDTTQHASRVDRVPHGIGMTAPGQLTEEEQTDVSGEDKPTLLLVEDHPELNNYLRQQLSDRFRVMQAMRGDEGLQMARWLVPDLIISDVMMPGMDGFSMTRHLKEDDLTSHIPIILLTAKDDIDSRKEGFEGGAEQYLAKPFALDELIARINSLLTQRNLLRKKYSREVMLQPTSAPVRDREAEFLEKIIRLIDEHITDEAFSVETLQRELGISRMQLHRKLKALTDQSASDFIRYIRLQRAADLLQQPGIQIAEAAYLSGFNHLSYFSKCFKDQFGMLPSEFIRQKEINK
SIO_010081: DR864_RS29265
subclass of: SO_0000673
so part of: DR864_RS29265
location: complement(37868..41134)
location: region:37868-41134:-1
so has part: feature:37868-41134:-1:exon

WP_114070693.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37868-41134:-1:exon

DR864_RS29275
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
gene: fdhA
locus tag: DR864_RS29275
old locus tag: DR864_29265
so part of: sequence
location: complement(41747..42937)
location: region:41747-42937:-1
so has part: feature:41747-42937:-1:exon
subclass of: SO_0000010

position:41747:-1
position: 41747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42937:-1
position: 42937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41747-42937:-1:exon

DR864_RS29275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
gene: fdhA
locus tag: DR864_RS29275
old locus tag: DR864_29265
EC number: 1.2.1.46
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010856498.1
GO function: GO:0018467 - formaldehyde dehydrogenase activity [Evidence IEA]
GO process: GO:0046292 - formaldehyde metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: formaldehyde dehydrogenase, glutathione-independent
translation: MCQNHGVAYIKPGVVEVREIEYPKLALGNRKCEHGVILKIVSTNICGSDQHMVRGRTTAPEGLILGHEITGLVIESGRDVEFIKEGDLVSVPFNIACGRCRNCKAGQTGICLNVNPARPGAAYGYVDMGGWVGGQAEYVMVPYADFNLLKFPDSDQAMAKIRDLTLLSDIFPTGFHGAVTAGVGPGSIVYVAGAGPVGLACAASCHLLGAALVIVGDMIDERLEQARSFGCETIDLKKEATLAEQIEQIVGVPEVDCAVDCVGFEAKGHGVDSDVEQPATVLNSIMEVTRAGGQLGIPGLYVTGDPGAVDEAAKKGSLSIRIGLGWAKSHSIHTGQCPVMKYHRQLMNAILYDKIKIADAVNVEVISLQNSVKGYADFDKGAAKKFVIDPHGMIPV
SIO_010081: DR864_RS29275
subclass of: SO_0000673
so part of: DR864_RS29275
location: complement(41747..42937)
location: region:41747-42937:-1
so has part: feature:41747-42937:-1:exon

WP_114070695.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41747-42937:-1:exon

DR864_RS29280
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29280
old locus tag: DR864_29270
so part of: sequence
location: complement(43487..44197)
location: region:43487-44197:-1
so has part: feature:43487-44197:-1:exon
subclass of: SO_0000010

position:43487:-1
position: 43487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44197:-1
position: 44197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43487-44197:-1:exon

DR864_RS29280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29280
old locus tag: DR864_29270
inference: COORDINATES: protein motif:HMM:NF016296.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LytTR family DNA-binding domain-containing protein
translation: MARCVIVDDEPLAIDILETYLSQLKEATLVATFTDSVEAFSFLQRNQVDIVFLDLHMPMLNGIELVKNLTTKPAFIITTAYREYAVEGFELDVVDYLVKPIAFPRFLKAINKVMPSSNAPTATVSTPMPAENGQTLWLKVDKKLVPVSVESILYIESLKDYIRVVTPSQKLVSYHSLQAILDKLTAAQFVRIHKSYVVQVTKINSIEGNMVHIANEVLPIGRSFRSDLLARIEGKR
SIO_010081: DR864_RS29280
subclass of: SO_0000673
so part of: DR864_RS29280
location: complement(43487..44197)
location: region:43487-44197:-1
so has part: feature:43487-44197:-1:exon

WP_114070696.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43487-44197:-1:exon

DR864_RS29285
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29285
old locus tag: DR864_29275
so part of: sequence
location: complement(44182..45294)
location: region:44182-45294:-1
so has part: feature:44182-45294:-1:exon
subclass of: SO_0000010

position:44182:-1
position: 44182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45294:-1
position: 45294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44182-45294:-1:exon

DR864_RS29285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29285
old locus tag: DR864_29275
inference: COORDINATES: protein motif:HMM:NF018305.2
GO component: GO:0016021 - integral component of membrane [Evidence IEA]
GO function: GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidine kinase
translation: MMTSASSLPIRQPILSPALTADWTTRLLANRVAYHILFWGSVFGFNAAYIAFIGEDRDIALFNLGLRIPFILAGCYINLYYLMPRFFNTGNFLLYALAVFGLIFSLNAVNLYVLELFIDSPICPTTFEADATFNGSNYIYKGFYLVSIVGLTSGIKLSKNQLTEKQKAEAIEKEKLQTELLLLKSQINPHFFFNTLNNLYALTLKKSDRAPEMVLKLSDLMSYSLYESDGLTVSLDKEISHIRNYIELETVRLGTKMTMNFVVNGPIGQQLIPPLLFLPIIENCFKHSATNVPGGVITVSITITPDTILLETRNPSHSTGSALTKKGGLGLRNVQRRLQLLYGSDYRFETGLHNETFSSTLQIPLVWPVV
SIO_010081: DR864_RS29285
subclass of: SO_0000673
so part of: DR864_RS29285
location: complement(44182..45294)
location: region:44182-45294:-1
so has part: feature:44182-45294:-1:exon

WP_114070697.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44182-45294:-1:exon

DR864_RS29290
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29290
old locus tag: DR864_29280
so part of: sequence
location: 45490..46641
location: region:45490-46641:1
so has part: feature:45490-46641:1:exon
subclass of: SO_0000010

position:45490:1
position: 45490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46641:1
position: 46641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45490-46641:1:exon

DR864_RS29290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29290
old locus tag: DR864_29280
inference: COORDINATES: protein motif:HMM:NF014068.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nuclear transport factor 2 family protein
translation: MMNRKLKSNTLVLVMLLLVTAIRSHAQPKKILIVSTNRDSVGTNVSGTFLKEIAYPFQYFTDKGFEVDIVTPKGGKAAIYSTGEVPDVLRSIRQSTLFMAKTSATLKPDEVTASKYAAVFYPGGHGQYFDVISDERIARLTATIYENGGTIGTAGHGVASLIDVKLSSGKYLIDGKRITCFPHWAELAWMNISSYGKLLPFDMQEVLARRGANLVVSTKETASDKALTLVADHPNRLVTGSFASSAPWVAEQMVSIISRSESPSETVQILRAVNNYAEGRNSGNIDRMKQAFHAGAVLKAIDEKTKDIVTTPIADYIARNKPGQKHDCSTDVRLLDYTATTAIARVTFTYTTHAYHDNLILLKVKDQWLITEKVYSKTVFQNQ
SIO_010081: DR864_RS29290
subclass of: SO_0000673
so part of: DR864_RS29290
location: 45490..46641
location: region:45490-46641:1
so has part: feature:45490-46641:1:exon

WP_114070698.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45490-46641:1:exon

DR864_RS29295
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29295
old locus tag: DR864_29285
so part of: sequence
location: 46657..49056
location: region:46657-49056:1
so has part: feature:46657-49056:1:exon
subclass of: SO_0000010

position:46657:1
position: 46657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49056:1
position: 49056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46657-49056:1:exon

DR864_RS29295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29295
old locus tag: DR864_29285
inference: COORDINATES: protein motif:HMM:NF026255.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane beta-barrel protein
translation: MKLRFTLFLCLAPSLLFAQIKLSGRVTDNRNQPLPYANVLLLTPTDSTMIAGTVTNSEGGFLMENITAGSYRLSVRMVGYTSVTLLQDIFVDKTLETIVLTETATTLNEVVVKAEKPLFEQQLDKLVVNLKNNVVSAGNTVLDVLERSPGISVDRQSGSLSMNGKQGVQVMINGKLQRLPLNVVVQQLEGLTSAGVEKIELISNPSSRFDAEGDAGIINIVTKQQTDLGTNGTAMVGIGYADLSGFWKPTGSLAINHKRQNLLLTANYSLVQDNRWQQWNYERQLLTPNLYSNTITDRYASWPVQRAGLGLEWNINKTTSINTLVAGFSDYWKMESFNQSRVMLNGRDSARINLYDREVNHWKHLMGNVNLNHRLANGARLSIDLDYLYYHDHNPNEFTNTYSYVATNQVVQEQVRTGKETPISMGVIKVDYETKWRTLKLELGGKSTFSRLRNTVSLENMVGEAWIADTRFTQNYSLRDDANAVYVNVSGKAGPKGQFQAGLRAESTDMEMTASGQRLFSLDFLKLFPTFFYTWQATANSSLQVSYNRRITRPAYTSVAPFVIFMDPFTYYWGNLQLKPAISNGVQASYTYKDLLLTLKYSQDRNAIAGNQSRYNSEERKTYIYADNVDQLQLYAFTASWPWKVTSWWRTQSNALLTYQKTNHVYAGVPIELNQYSARLSLNQTFTLPGKITLEVSGVYASPITVGLSVRKAAGVVSAGVQKVINDYSKLNLTVTDIFWTRNSIYVSDNPLLGQIQKTSYYNEPRVLRLSYTVTLGNTKMKSAKARTTASEAEQQRVN
SIO_010081: DR864_RS29295
subclass of: SO_0000673
so part of: DR864_RS29295
location: 46657..49056
location: region:46657-49056:1
so has part: feature:46657-49056:1:exon

WP_114070699.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46657-49056:1:exon

DR864_RS30025
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS30025
so part of: sequence
location: complement(49238..49390)
location: region:49238-49390:-1
so has part: feature:49238-49390:-1:exon
subclass of: SO_0000010

position:49238:-1
position: 49238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49390:-1
position: 49390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49238-49390:-1:exon

DR864_RS30025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS30025
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKAKQGDQLQTWCNKALESGVVALKGFANGIKQAGGVPHFKAIFYAVTSE
SIO_010081: DR864_RS30025
subclass of: SO_0000673
so part of: DR864_RS30025
location: complement(49238..49390)
location: region:49238-49390:-1
so has part: feature:49238-49390:-1:exon

WP_162794296.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49238-49390:-1:exon

DR864_RS29305
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29305
old locus tag: DR864_29295
so part of: sequence
location: complement(49984..50625)
location: region:49984-50625:-1
so has part: feature:49984-50625:-1:exon
subclass of: SO_0000010

position:49984:-1
position: 49984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50625:-1
position: 50625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49984-50625:-1:exon

DR864_RS29305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29305
old locus tag: DR864_29295
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEIETLKAAWQDYDRLLQTTPELSKKALHRLIRERSRSRIAQIRIEYGVTCVFSFLLILFFGAVIGGNPFDFQYRIQFLPAILIMGWTLVFIIVLLRGYREVNISIHADNLILSLNKVISAYARSQALVHQAAVPVLLSGFFFPASFLPKHIYESGLTSGVLIAIAHIVLNVVLYFAAKRLGFFKSSFQAGLQRDLEELEQLKSLEGEENELE
SIO_010081: DR864_RS29305
subclass of: SO_0000673
so part of: DR864_RS29305
location: complement(49984..50625)
location: region:49984-50625:-1
so has part: feature:49984-50625:-1:exon

WP_114070701.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49984-50625:-1:exon

DR864_RS29310
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29310
old locus tag: DR864_29300
so part of: sequence
location: complement(50631..51113)
location: region:50631-51113:-1
so has part: feature:50631-51113:-1:exon
subclass of: SO_0000010

position:50631:-1
position: 50631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51113:-1
position: 51113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50631-51113:-1:exon

DR864_RS29310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29310
old locus tag: DR864_29300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019538881.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor
translation: MEKDFLHLLNIHRGILYKVCNLYLDNVEDRQDLFQEIVLQLWKAFPSFRNESAPSTWMYRVALNTAISNFRKRGKEGKKIELTASELQVPDVRYDDEINELAIRLREAIECLNAIEKAIILLYLDERSYTEIAAITGISLSNVGVKINRIKSKLKTIINH
SIO_010081: DR864_RS29310
subclass of: SO_0000673
so part of: DR864_RS29310
location: complement(50631..51113)
location: region:50631-51113:-1
so has part: feature:50631-51113:-1:exon

WP_114070702.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50631-51113:-1:exon

DR864_RS29320
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29320
old locus tag: DR864_29310
so part of: sequence
location: 52463..53107
location: region:52463-53107:1
so has part: feature:52463-53107:1:exon
subclass of: SO_0000010

position:52463:1
position: 52463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53107:1
position: 53107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52463-53107:1:exon

DR864_RS29320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29320
old locus tag: DR864_29310
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKLNFTVMASCLLVLFMMGCEKGSLLDSAAEKKASFDLKMNSINDLGEEVTSTIKVLPSAQFKRRLKSGANPNQVATGNFRTDLGSKYNFSAVKSPDGVSGEWQVNSVTVGHFYMKTIDVYVDGDEATMAGIVTEVVSGGFQKNWIVFIKIKDNGEGNNSAPDQSSYILLYYPDWFNFYPSPDAFLAIINCESLAENPIFGAFLDRDGQIQVR
SIO_010081: DR864_RS29320
subclass of: SO_0000673
so part of: DR864_RS29320
location: 52463..53107
location: region:52463-53107:1
so has part: feature:52463-53107:1:exon

WP_114070704.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52463-53107:1:exon

DR864_RS30440
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS30440
so part of: sequence
location: 53309..53437
location: region:53309-53437:1
so has part: feature:53309-53437:1:exon
subclass of: SO_0000010

position:53309:1
position: 53309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53437:1
position: 53437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53309-53437:1:exon

DR864_RS30440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS30440
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATIVNHETTVFEGKSCPHAQGVAIADMGANETRRIAGGLQL
SIO_010081: DR864_RS30440
subclass of: SO_0000673
so part of: DR864_RS30440
location: 53309..53437
location: region:53309-53437:1
so has part: feature:53309-53437:1:exon

WP_262510970.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53309-53437:1:exon

DR864_RS30310
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS30310
old locus tag: DR864_29315
pseudo: true
so part of: sequence
location: complement(<53828..>53986)
location: region:53828-53986:-1
so has part: feature:53828-53986:-1:exon
subclass of: SO_0000010

position:53828:-1
position: 53828
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:53986:-1
position: 53986
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53828-53986:-1:exon

DR864_RS30310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS30310
old locus tag: DR864_29315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611196.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: DR864_RS30310
subclass of: SO_0000673
so part of: DR864_RS30310
location: complement(<53828..>53986)
location: region:53828-53986:-1
so has part: feature:53828-53986:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53828-53986:-1:exon

DR864_RS29330
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29330
old locus tag: DR864_29320
pseudo: true
so part of: sequence
location: complement(54119..>54493)
location: region:54119-54493:-1
so has part: feature:54119-54493:-1:exon
subclass of: SO_0000010

position:54119:-1
position: 54119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54493:-1
position: 54493
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54119-54493:-1:exon

DR864_RS29330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29330
old locus tag: DR864_29320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003361459.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: SAM-dependent methyltransferase
SIO_010081: DR864_RS29330
subclass of: SO_0000673
so part of: DR864_RS29330
location: complement(54119..>54493)
location: region:54119-54493:-1
so has part: feature:54119-54493:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54119-54493:-1:exon

DR864_RS29335
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29335
old locus tag: DR864_29325
so part of: sequence
location: 54622..55803
location: region:54622-55803:1
so has part: feature:54622-55803:1:exon
subclass of: SO_0000010

position:54622:1
position: 54622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55803:1
position: 55803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54622-55803:1:exon

DR864_RS29335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29335
old locus tag: DR864_29325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020605466.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MIQRTLFGELEAHLAKPQATVITGMRRVGKTTALKFLLAKTVHVNKLYLDFEKIENRILFSQNSYQAIEAGLEALGLDLHQPAVLALDEIQLVPNSPSVIKYLYDTYAIKFILTGSSSYYLKNHFTESLAGRKRIFEMFPLGFDEFLQFRGFARSQFEHTAQQHFSEPIYQIFRQEYETFLRFGGFPEVVLAETANDKTAFLKDIINAYIELDIKLLSDFRVSNDLYKLCQLLASRTGSRLDVSKLSSISGINRNKLTEYMSLFEYTYFIHLIPSFTKNKDKEIAAQRKVYIADTGMLQILAQVSSGQVFENAVALQLLRLGEVAYYQKKSGQEIDFILNKDTAIEVKETPSYPDLKTLNYRSDDLELPHSRLVGRHFTNSDFQEWYWGGGIF
SIO_010081: DR864_RS29335
subclass of: SO_0000673
so part of: DR864_RS29335
location: 54622..55803
location: region:54622-55803:1
so has part: feature:54622-55803:1:exon

WP_114070707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54622-55803:1:exon

DR864_RS29340
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29340
old locus tag: DR864_29330
pseudo: true
so part of: sequence
location: 55863..>56045
location: region:55863-56045:1
so has part: feature:55863-56045:1:exon
subclass of: SO_0000010

position:55863:1
position: 55863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56045:1
position: 56045
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55863-56045:1:exon

DR864_RS29340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29340
old locus tag: DR864_29330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006582017.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: type I restriction-modification system subunit M N-terminal domain-containing protein
SIO_010081: DR864_RS29340
subclass of: SO_0000673
so part of: DR864_RS29340
location: 55863..>56045
location: region:55863-56045:1
so has part: feature:55863-56045:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55863-56045:1:exon

DR864_RS29345
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29345
old locus tag: DR864_29335
so part of: sequence
location: complement(56810..57130)
location: region:56810-57130:-1
so has part: feature:56810-57130:-1:exon
subclass of: SO_0000010

position:56810:-1
position: 56810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57130:-1
position: 57130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56810-57130:-1:exon

DR864_RS29345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29345
old locus tag: DR864_29335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010325989.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: multidrug efflux SMR transporter
translation: MSWIYLIFAGLLEVVWAYSMKQSEGFKHFTPSLITLVAMIGSFGLLALAMRTLPLGTAYTIWTGIGAIGAFLIGILFLGEPISFTRLMAAFLILAGLIIMKLSSSH
SIO_010081: DR864_RS29345
subclass of: SO_0000673
so part of: DR864_RS29345
location: complement(56810..57130)
location: region:56810-57130:-1
so has part: feature:56810-57130:-1:exon

WP_114070709.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56810-57130:-1:exon

DR864_RS29350
type: Gene
subclass of: SO_0000704
RO_0002162: 2259595
locus tag: DR864_RS29350
old locus tag: DR864_29340
so part of: sequence
location: 57517..>57835
location: region:57517-57835:1
so has part: feature:57517-57835:1:exon
subclass of: SO_0000010

position:57517:1
position: 57517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57517-57835:1:exon

DR864_RS29350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2259595
locus tag: DR864_RS29350
old locus tag: DR864_29340
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKQLLIFLLTTILFGCQNKNSQQTEIVPVSPGLAGTYSKTYNPNEHALFRQIFSDYNTFQETATVVITQTATDDYKLEVILYGTAKKEKAPDIRYGVTAELRRVKG
SIO_010081: DR864_RS29350
subclass of: SO_0000673
so part of: DR864_RS29350
location: 57517..>57835
location: region:57517-57835:1
so has part: feature:57517-57835:1:exon

WP_162794298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57517-57835:1:exon