Sulfitobacter indolifex strain DSM 14862 plasmid pDSM14862_c, complete sequence.
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Roseobacteraceae; Sulfitobacter.
Beyond the ABCs#Discovery of Three New Plasmid Types in Rhodobacterales (RepQ, RepY, RepW)
Submitted (08-OCT-2021) Microbial Ecology and Diversity, Leibniz Institute DSMZ, Inhoffenstr. 7 B, Braunschweig 38124, Germany
REFSEQ INFORMATION: The reference sequence is identical to\nCP084954.1.\nAnnotated using Prokka 1.13 from\nhttps://github.com/tseemann/prokka.\nBacteria and source DNA available from Leibniz Institute DSMZ.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP3 SMRTPortal v. 2.3.0\nGenome Coverage :: 378x\nSequencing Technology :: PacBio RSII; Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/15/2023 03:39:47\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,368\nCDSs (total) :: 4,303\nGenes (coding) :: 4,228\nCDSs (with protein) :: 4,228\nGenes (RNA) :: 65\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 49\nncRNAs :: 4\nPseudo Genes (total) :: 75\nCDSs (without protein) :: 75\nPseudo Genes (ambiguous residues) :: 0 of 75\nPseudo Genes (frameshifted) :: 38 of 75\nPseudo Genes (incomplete) :: 46 of 75\nPseudo Genes (internal stop) :: 27 of 75\nPseudo Genes (multiple problems) :: 29 of 75\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
Seawater from the North Sea by Helgoland
COORDINATES: similar to AA sequence:RefSeq:WP_005854399.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005854400.1
COORDINATES: similar to AA sequence:RefSeq:WP_009827171.1
COORDINATES: similar to AA sequence:RefSeq:WP_005636048.1
COORDINATES: similar to AA sequence:RefSeq:WP_017929687.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009829149.1
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007197244.1
COORDINATES: similar to AA sequence:RefSeq:WP_010437884.1
TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008597742.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009829161.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007009254.1
aromatic ring-hydroxylating dioxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_007197249.1
GO:0019439 - aromatic compound catabolic process [Evidence IEA]; GO:0006725 - cellular aromatic compound metabolic process [Evidence IEA]
aromatic-ring-hydroxylating dioxygenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_007197250.1
COORDINATES: similar to AA sequence:RefSeq:WP_011454459.1
COORDINATES: similar to AA sequence:RefSeq:WP_009830424.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_008547106.1
GO:0016812 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008546911.1
COORDINATES: similar to AA sequence:RefSeq:WP_005848998.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010910827.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009178601.1
COORDINATES: similar to AA sequence:RefSeq:WP_010137794.1
COORDINATES: similar to AA sequence:RefSeq:WP_012207740.1
COORDINATES: similar to AA sequence:RefSeq:WP_009826701.1
COORDINATES: similar to AA sequence:RefSeq:WP_005852764.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015416 - ABC-type phosphonate transporter activity [Evidence IEA]
GO:0015716 - organic phosphonate transport [Evidence IEA]
phosphonate ABC transporter, permease protein PhnE
COORDINATES: similar to AA sequence:RefSeq:WP_005852762.1
COORDINATES: similar to AA sequence:RefSeq:WP_005614864.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0015416 - ABC-type phosphonate transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
phosphonate ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005852758.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0043168 - anion binding [Evidence IEA]; GO:0043225 - ATPase-coupled inorganic anion transmembrane transporter activity [Evidence IEA]
phosphate/phosphite/phosphonate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_017929866.1
COORDINATES: similar to AA sequence:RefSeq:WP_017929867.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007770961.1
COORDINATES: similar to AA sequence:RefSeq:WP_003499576.1
gamma-glutamyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017929870.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017929871.1
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017929872.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_017929873.1
GO:0015833 - peptide transport [Evidence IEA]
dipeptide ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_017929874.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009814069.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002966346.1
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008557414.1
COORDINATES: similar to AA sequence:RefSeq:WP_005663921.1
COORDINATES: similar to AA sequence:RefSeq:WP_015314076.1
indolepyruvate ferredoxin oxidoreductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_008226276.1
indolepyruvate oxidoreductase subunit beta family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009814974.1
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013420875.1
COORDINATES: protein motif:HMM:TIGR00685.1
GO:0004805 - trehalose-phosphatase activity [Evidence IEA]
GO:0005992 - trehalose biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005859008.1
COORDINATES: similar to AA sequence:RefSeq:WP_009506388.1
COORDINATES: similar to AA sequence:RefSeq:WP_018301469.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017928072.1
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007254724.1
GO:0009331 - glycerol-3-phosphate dehydrogenase complex [Evidence IEA]
GO:0004368 - glycerol-3-phosphate dehydrogenase (quinone) activity [Evidence IEA]
GO:0006072 - glycerol-3-phosphate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009826624.1
COORDINATES: similar to AA sequence:RefSeq:WP_009573171.1
COORDINATES: similar to AA sequence:RefSeq:WP_008886971.1
COORDINATES: similar to AA sequence:RefSeq:WP_007802786.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005861099.1
COORDINATES: similar to AA sequence:RefSeq:WP_009816394.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011569024.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013961488.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009806040.1
COORDINATES: similar to AA sequence:RefSeq:WP_005858687.1
COORDINATES: similar to AA sequence:RefSeq:WP_009814289.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009814288.1
COORDINATES: similar to AA sequence:RefSeq:WP_009451149.1
COORDINATES: similar to AA sequence:RefSeq:WP_011537208.1
COORDINATES: similar to AA sequence:RefSeq:WP_009451151.1
COORDINATES: similar to AA sequence:RefSeq:WP_011389098.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008602743.1
GO:0004096 - catalase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: similar to AA sequence:RefSeq:WP_009506391.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014625.2
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_009176543.1
GO:0005515 - protein binding [Evidence IEA]
GO:0006749 - glutathione metabolic process [Evidence IEA]
glutathione S-transferase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006831817.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004359 - glutaminase activity [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008224892.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009806035.1
COORDINATES: similar to AA sequence:RefSeq:WP_007425569.1
phospholipase D-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008330221.1
COORDINATES: similar to AA sequence:RefSeq:WP_008887034.1
glucans biosynthesis glucosyltransferase MdoH
COORDINATES: similar to AA sequence:RefSeq:WP_011908734.1
GO:0030246 - carbohydrate binding [Evidence IEA]
GO:0009250 - glucan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015497129.1
GO:0008198 - ferrous iron binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014527558.1
COORDINATES: similar to AA sequence:RefSeq:WP_004110209.1
COORDINATES: similar to AA sequence:RefSeq:WP_017271790.1
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007528825.1
COORDINATES: similar to AA sequence:RefSeq:WP_003528591.1
COORDINATES: similar to AA sequence:RefSeq:WP_017271789.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011969499.1
COORDINATES: similar to AA sequence:RefSeq:WP_007254929.1
COORDINATES: similar to AA sequence:RefSeq:WP_009818131.1
COORDINATES: similar to AA sequence:RefSeq:WP_010975160.1
COORDINATES: similar to AA sequence:RefSeq:WP_007197938.1
COORDINATES: similar to AA sequence:RefSeq:WP_019863866.1
COORDINATES: similar to AA sequence:RefSeq:WP_013527971.1
COORDINATES: similar to AA sequence:RefSeq:WP_006931345.1
COORDINATES: similar to AA sequence:RefSeq:WP_015314083.1
COORDINATES: similar to AA sequence:RefSeq:WP_008835104.1
COORDINATES: similar to AA sequence:RefSeq:WP_008872339.1
COORDINATES: similar to AA sequence:RefSeq:WP_005611174.1
peptide ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_010398359.1
oligopeptide ABC transporter permease OppB
COORDINATES: similar to AA sequence:RefSeq:WP_007121428.1
COORDINATES: similar to AA sequence:RefSeq:WP_009178580.1
COORDINATES: similar to AA sequence:RefSeq:WP_010398366.1
COORDINATES: similar to AA sequence:RefSeq:WP_013300279.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015502016.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
DDE-type integrase/transposase/recombinase
COORDINATES: similar to AA sequence:RefSeq:WP_018001746.1
COORDINATES: similar to AA sequence:RefSeq:WP_019956939.1
COORDINATES: similar to AA sequence:RefSeq:WP_008030576.1
internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
heavy metal-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018147870.1
GO:0043546 - molybdopterin cofactor binding [Evidence IEA]
xanthine dehydrogenase family protein molybdopterin-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_008230018.1
xanthine dehydrogenase family protein subunit M
COORDINATES: similar to AA sequence:RefSeq:WP_018147872.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008229743.1
glutathionylspermidine synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002724223.1
COORDINATES: similar to AA sequence:RefSeq:WP_015495595.1
COORDINATES: similar to AA sequence:RefSeq:WP_009571015.1
3-keto-5-aminohexanoate cleavage protein
COORDINATES: similar to AA sequence:RefSeq:WP_019463460.1
GO:0070403 - NAD+ binding [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008956482.1
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: similar to AA sequence:RefSeq:WP_020040099.1
COORDINATES: similar to AA sequence:RefSeq:WP_020040098.1
GO:0050043 - lactate racemase activity [Evidence IEA]
lactate racemase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020798281.1
COORDINATES: similar to AA sequence:RefSeq:WP_018480299.1
COORDINATES: similar to AA sequence:RefSeq:WP_018245656.1
COORDINATES: similar to AA sequence:RefSeq:WP_018237608.1
GO:0009436 - glyoxylate catabolic process [Evidence IEA]; GO:0071704 - organic substance metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007090597.1
COORDINATES: similar to AA sequence:RefSeq:WP_010847906.1
COORDINATES: similar to AA sequence:RefSeq:WP_018304729.1
COORDINATES: protein motif:HMM:NF012607.2
COORDINATES: similar to AA sequence:RefSeq:WP_018067167.1
COORDINATES: similar to AA sequence:RefSeq:WP_020040089.1
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_003592584.1
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
nickel pincer cofactor biosynthesis protein LarB
COORDINATES: similar to AA sequence:RefSeq:WP_012318344.1
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: similar to AA sequence:RefSeq:WP_019017805.1
TAXI family TRAP transporter solute-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007121068.1
COORDINATES: similar to AA sequence:RefSeq:WP_019017816.1
COORDINATES: similar to AA sequence:RefSeq:WP_012334717.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008944609.1
COORDINATES: similar to AA sequence:RefSeq:WP_009825915.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007801466.1
COORDINATES: similar to AA sequence:RefSeq:WP_015501546.1
GO:0016151 - nickel cation binding [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008232968.1
GO:0016151 - nickel cation binding [Evidence IEA]; GO:0009039 - urease activity [Evidence IEA]
GO:0043419 - urea catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011569873.1
GO:0035550 - urease complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011047449.1
GO:0019627 - urea metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020042425.1
COORDINATES: similar to AA sequence:RefSeq:WP_015501542.1
COORDINATES: similar to AA sequence:RefSeq:WP_005976946.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016530 - metallochaperone activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022436.2
COORDINATES: similar to AA sequence:RefSeq:WP_009764179.1
COORDINATES: protein motif:HMM:NF014476.2
cyclodeaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF019947.2
COORDINATES: similar to AA sequence:RefSeq:WP_007196302.1
GO:0008777 - acetylornithine deacetylase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010443440.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019016085.1
COORDINATES: similar to AA sequence:RefSeq:WP_018688080.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008208390.1
GO:0018826 - methionine gamma-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0019346 - transsulfuration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014874762.1
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0016114 - terpenoid biosynthetic process [Evidence IEA]
1-deoxy-D-xylulose-5-phosphate synthase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008229871.1
COORDINATES: similar to AA sequence:RefSeq:WP_005848778.1
GO:0015556 - C4-dicarboxylate transmembrane transporter activity [Evidence IEA]
GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009824259.1
COORDINATES: similar to AA sequence:RefSeq:WP_008282852.1
COORDINATES: similar to AA sequence:RefSeq:WP_009176102.1
COORDINATES: similar to AA sequence:RefSeq:WP_009820022.1
TRAP transporter substrate-binding protein DctP
COORDINATES: similar to AA sequence:RefSeq:WP_008227899.1
COORDINATES: similar to AA sequence:RefSeq:WP_008279989.1
COORDINATES: similar to AA sequence:RefSeq:WP_018303041.1
The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc.; The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017927022.1
amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_009506183.1
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007802709.1
COORDINATES: similar to AA sequence:RefSeq:WP_008887953.1
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0009061 - anaerobic respiration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015494326.1
GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014875662.1
COORDINATES: similar to AA sequence:RefSeq:WP_014875663.1
COORDINATES: similar to AA sequence:RefSeq:WP_009813001.1
COORDINATES: similar to AA sequence:RefSeq:WP_008232028.1
COORDINATES: similar to AA sequence:RefSeq:WP_009506176.1
COORDINATES: similar to AA sequence:RefSeq:WP_005864025.1
COORDINATES: similar to AA sequence:RefSeq:WP_005864029.1
COORDINATES: similar to AA sequence:RefSeq:WP_009817706.1
COORDINATES: similar to AA sequence:RefSeq:WP_005864100.1
biotin/lipoate--protein ligase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009813009.1
COORDINATES: similar to AA sequence:RefSeq:WP_008561295.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008558087.1
COORDINATES: similar to AA sequence:RefSeq:WP_008559368.1