Candidatus Rhabdochlamydia porcellionis strain 15C plasmid unnamed, complete sequence.
type: Entry
definition: Candidatus Rhabdochlamydia porcellionis strain 15C plasmid unnamed, complete sequence.
sequence version: NZ_CP075586.1
sequence date: 2023-05-07
sequence: sequence
division: CON
label: NZ_CP075586.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN10089613
keyword: RefSeq
source: Candidatus Rhabdochlamydia porcellionis
organism: Candidatus Rhabdochlamydia porcellionis
taxonomy: Bacteria; Chlamydiota; Chlamydiia; Parachlamydiales; Rhabdochlamydiaceae; Candidatus Rhabdochlamydia.
reference: 1
reference: 2
reference: 3
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP075586.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Unicycler v. v0.4.6\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 1800.0x\nSequencing Technology :: Oxford Nanopore; Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/07/2023 05:37:03\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,433\nCDSs (total) :: 1,387\nGenes (coding) :: 1,358\nCDSs (with protein) :: 1,358\nGenes (RNA) :: 46\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 37\nncRNAs :: 3\nPseudo Genes (total) :: 29\nCDSs (without protein) :: 29\nPseudo Genes (ambiguous residues) :: 0 of 29\nPseudo Genes (frameshifted) :: 9 of 29\nPseudo Genes (incomplete) :: 21 of 29\nPseudo Genes (internal stop) :: 5 of 29\nPseudo Genes (multiple problems) :: 4 of 29\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 19669
topology: circular
so has quality: SO_0000988
location: 1..19669
location: region:1-19669:1
RO_0002162: 225148

NZ_CP075586
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN10089613
type: BioSample
SIO_000068: biosample

1
title: Ecology and evolution of chlamydial symbionts of arthropods
author: Halter, T.
author: Sixt, B.S.
author: Toenshoff, E.R.
author: Koestlbacher, S.
author: Schulz, F.
author: Kostanjsek, R.
author: Collingro, A.
author: Hendrickx, F.
author: Horn, M.
journal: Unpublished

2
title: Direct Submission
author: Halter, T.
author: Sixt, B.S.
author: Toenshoff, E.R.
author: Koestlbacher, S.
author: Schulz, F.
author: Kostanjsek, R.
author: Collingro, A.
author: Hendrickx, F.
author: Horn, M.
journal: Submitted (19-MAY-2021) Division of Microbial Ecology, Centre for Microbiology and Environmental Systems Science, Althanstrasse 14, Vienna, Vienna 1090, Austria

3
title: Direct Submission
author: Sixt, B.
author: Schulz, F.
author: Kostanjsek, R.
author: Koestlbacher, S.
author: Collingro, A.
author: Toenshoff, E.
author: Horn, M.
journal: Submitted (21-JAN-2020) Division of Microbial Ecology, University of Vienna, Althanstrasse 14, Vienna 1090, Austria

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19669:1
position: 19669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-19669:1:source
so part of: sequence
organism: Candidatus Rhabdochlamydia porcellionis
mol type: genomic DNA
strain: 15C
isolation source: hepatopancreas
host: Porcellio scaber
culture collection: DSM:27522
plasmid: unnamed
country: Slovenia:Ljubljana
lat lon: 46.05 N 14.22 E
collection date: 2011-01-25

225148
type: Taxonomy
SIO_000068: taxonomy

RHAB15C_RS07080
type: Gene
subclass of: SO_0000704
RO_0002162: 225148
locus tag: RHAB15C_RS07080
old locus tag: RHAB15C_0001392
so part of: sequence
location: complement(277..1275)
location: region:277-1275:-1
so has part: feature:277-1275:-1:exon
subclass of: SO_0000010

position:277:-1
position: 277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1275:-1
position: 1275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277-1275:-1:exon

RHAB15C_RS07080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 225148
locus tag: RHAB15C_RS07080
old locus tag: RHAB15C_0001392
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: Lpg1974 family pore-forming outer membrane protein
translation: MFTLCVIPAMTSAGESCGYPEECCDVLLVKNPEIQQNLVVDYLYFRAIEDTLKYGETNFGLVPPPSHDIEQDFSYNSGVRATINIPTYDSWLLSGSYTYFRAHPSKVTADDPAGNIFANLVAPTYFSPVNQQVSHLSGEWELKMQIFDVLFKKGLMIGKSLLIEPFFGVQGCTVKQKVDVHYTFFRPRTSLSSPQKVNGVSRVSGIGPELGAEFRLVFPCQINLFARGGVSCLLGSFKMHTDYGNLLNCSSSSTRISLRDHKLRLFSSMQLQVALSKWWCTSRSSELELTVGWETQVWWRQMRMNWFSTLAFPPDGSDLTLHGPFVRLSLGF
SIO_010081: RHAB15C_RS07080
subclass of: SO_0000673
so part of: RHAB15C_RS07080
location: complement(277..1275)
location: region:277-1275:-1
so has part: feature:277-1275:-1:exon

WP_194845917.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277-1275:-1:exon

RHAB15C_RS07085
type: Gene
subclass of: SO_0000704
RO_0002162: 225148
locus tag: RHAB15C_RS07085
old locus tag: RHAB15C_0001393
so part of: sequence
location: complement(1320..1493)
location: region:1320-1493:-1
so has part: feature:1320-1493:-1:exon
subclass of: SO_0000010

position:1320:-1
position: 1320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1493:-1
position: 1493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1320-1493:-1:exon

RHAB15C_RS07085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 225148
locus tag: RHAB15C_RS07085
old locus tag: RHAB15C_0001393
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
GO process: GO:0008219 - cell death [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system prevent-host-death family antitoxin
translation: MTNTIPFSLARGCLTDIVNEAAYANKRTILTRKGKKVAAIISLKDLKILESIKDKQG
SIO_010081: RHAB15C_RS07085
subclass of: SO_0000673
so part of: RHAB15C_RS07085
location: complement(1320..1493)
location: region:1320-1493:-1
so has part: feature:1320-1493:-1:exon

WP_194845918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1320-1493:-1:exon

RHAB15C_RS07090
type: Gene
subclass of: SO_0000704
RO_0002162: 225148
locus tag: RHAB15C_RS07090
old locus tag: RHAB15C_0001394
so part of: sequence
location: 1613..2974
location: region:1613-2974:1
so has part: feature:1613-2974:1:exon
subclass of: SO_0000010

position:1613:1
position: 1613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2974:1
position: 2974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1613-2974:1:exon

RHAB15C_RS07090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 225148
locus tag: RHAB15C_RS07090
old locus tag: RHAB15C_0001394
inference: COORDINATES: protein motif:HMM:NF024872.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MIINSYLILLPHGRNLRPLQDKFYEIGGFYNGIGYVFPPQKEQILKQILKHLPDIKIRKVDLEKDHTFDSIRQMHNASYFRDKLFALDNKISSITRIYQLDELSEASIESLQLSLEQKTLFLELIQEREKLKKALEWAEAMEKTLSSQKSVSFQMKFISEQPVNFLLEEAPKMPRLINYIEDSYTKAFIRKGIVGMLVGSGGVGKTHALAQLAISITTGIPWLGKYPVEKTGCVFMGMGENSEEDIHRMLRKIVKKLFREQTSFFDKNPLLEASKRLAVASFNGADSSFIYKGKPTQSYELLLQELKEKEPKEGWSCIILDPISRFLGADAEIDNASATRFIALLEKITLELEGHPTVLFGHHMSKNAQAARNTDQGAARGSSAITDGVRWQANLEKIRKTLNSEEEEYELDQIILRSVKSNFTAILPSLRLKKDKDGILFVQDPNQSIFKKR
SIO_010081: RHAB15C_RS07090
subclass of: SO_0000673
so part of: RHAB15C_RS07090
location: 1613..2974
location: region:1613-2974:1
so has part: feature:1613-2974:1:exon

WP_194845919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1613-2974:1:exon

RHAB15C_RS07095
type: Gene
subclass of: SO_0000704
RO_0002162: 225148
locus tag: RHAB15C_RS07095
old locus tag: RHAB15C_0001395
so part of: sequence
location: 2971..4371
location: region:2971-4371:1
so has part: feature:2971-4371:1:exon
subclass of: SO_0000010

position:2971:1
position: 2971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4371:1
position: 4371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2971-4371:1:exon

RHAB15C_RS07095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 225148
locus tag: RHAB15C_RS07095
old locus tag: RHAB15C_0001395
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKEKTKSPNESVIDSCSENKELFLEEEVWGNINIEQTLNFTTEDVETLRQFPFIDQTLVEDFFKKLKNPQDRDLKWKNFLKSNPSKQQKEEWLKKNPKNKSIEESIKELNFLKYITENRKQIIQWLESEAKSNTFKKSGHLVDQQLKYLKSTEDPLHIFSLIENRELKNSIAQSKEIQEQTIQVGINLTAAQDRLVNALCRLLHEKSQIFNPGQSNYYTGNSPYTIADYGKKEEKIPSLVLEPHELYQAYLEKVDFSGKEISNIEDILEKAQNTRHLIIYEWRTKNKTGKTLVDRIEQYQPLFMVDRIFPGMNEEEANLVAQGDTEARRKKAKFLIKFNPLFIHQIESKYVLYPKDIHQRMAKAAGGDPRKVTPAMNSLRDFCLRALSNKQKKIELNQETLPLLLKLENYVKSGRKKEILKKIIDSFQVCKNIGLIDRWEEKSGTNNQTKYVIHLNPGFLGSTYLS
SIO_010081: RHAB15C_RS07095
subclass of: SO_0000673
so part of: RHAB15C_RS07095
location: 2971..4371
location: region:2971-4371:1
so has part: feature:2971-4371:1:exon

WP_194845920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2971-4371:1:exon

RHAB15C_RS07100
type: Gene
subclass of: SO_0000704
RO_0002162: 225148
locus tag: RHAB15C_RS07100
old locus tag: RHAB15C_0001396
so part of: sequence
location: 4994..5212
location: region:4994-5212:1
so has part: feature:4994-5212:1:exon
subclass of: SO_0000010

position:4994:1
position: 4994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5212:1
position: 5212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4994-5212:1:exon

RHAB15C_RS07100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 225148
locus tag: RHAB15C_RS07100
old locus tag: RHAB15C_0001396
inference: COORDINATES: protein motif:HMM:TIGR01552.1
GO process: GO:0008219 - cell death [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system prevent-host-death family antitoxin
translation: MQAAKFKSECLKVMERVKKTRRKVVITKRNVPIAKLVPLDVEDEQVLGKLKGTVHFKDNIMDSIEEDWDAHS
SIO_010081: RHAB15C_RS07100
subclass of: SO_0000673
so part of: RHAB15C_RS07100
location: 4994..5212
location: region:4994-5212:1
so has part: feature:4994-5212:1:exon

WP_194845043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4994-5212:1:exon

RHAB15C_RS07105
type: Gene
subclass of: SO_0000704
RO_0002162: 225148
locus tag: RHAB15C_RS07105
old locus tag: RHAB15C_0001397
so part of: sequence
location: 5199..5645
location: region:5199-5645:1
so has part: feature:5199-5645:1:exon
subclass of: SO_0000010

position:5199:1
position: 5199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5645:1
position: 5645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5199-5645:1:exon

RHAB15C_RS07105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 225148
locus tag: RHAB15C_RS07105
old locus tag: RHAB15C_0001397
inference: COORDINATES: protein motif:HMM:NF013970.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MPILRRLKRHRILLDTHVFIWVMNDSPLLTKEFKNSFASIFKTQGALLCPMSIWEIGMLTDKKRIEIDMDVLDWVNKALDSPGMLICPISPRIAIQSTRLPGKVHLDPVDRLLIATAYEESAVLVTSDRKIIDYGKGRFISVFDPCKR
SIO_010081: RHAB15C_RS07105
subclass of: SO_0000673
so part of: RHAB15C_RS07105
location: 5199..5645
location: region:5199-5645:1
so has part: feature:5199-5645:1:exon

WP_194845044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5199-5645:1:exon

RHAB15C_RS07110
type: Gene
subclass of: SO_0000704
RO_0002162: 225148
locus tag: RHAB15C_RS07110
old locus tag: RHAB15C_0001398
so part of: sequence
location: complement(5701..5913)
location: region:5701-5913:-1
so has part: feature:5701-5913:-1:exon
subclass of: SO_0000010

position:5701:-1
position: 5701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5913:-1
position: 5913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5701-5913:-1:exon

RHAB15C_RS07110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 225148
locus tag: RHAB15C_RS07110
old locus tag: RHAB15C_0001398
inference: COORDINATES: protein motif:HMM:NF024139.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MNNHLLDTSRKVVTLPEAAVMLGMSPLTIRRAIKSGKIKAMQISPKGRYRILIEELNGFIQRNSQMTTVG
SIO_010081: RHAB15C_RS07110
subclass of: SO_0000673
so part of: RHAB15C_RS07110
location: complement(5701..5913)
location: region:5701-5913:-1
so has part: feature:5701-5913:-1:exon

WP_194845045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5701-5913:-1:exon

RHAB15C_RS07115
type: Gene
subclass of: SO_0000704
RO_0002162: 225148
locus tag: RHAB15C_RS07115
old locus tag: RHAB15C_0001399
so part of: sequence
location: complement(6198..6368)
location: region:6198-6368:-1
so has part: feature:6198-6368:-1:exon
subclass of: SO_0000010

position:6198:-1
position: 6198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6368:-1
position: 6368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6198-6368:-1:exon

RHAB15C_RS07115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 225148
locus tag: RHAB15C_RS07115
old locus tag: RHAB15C_0001399
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKTKVLEVDEKMEKSLTNICDAALRFHGLQIMNTVVEVASAIRDREEEKYEERNP
SIO_010081: RHAB15C_RS07115
subclass of: SO_0000673
so part of: RHAB15C_RS07115
location: complement(6198..6368)
location: region:6198-6368:-1
so has part: feature:6198-6368:-1:exon

WP_194845046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6198-6368:-1:exon

RHAB15C_RS07290
type: Gene
subclass of: SO_0000704
RO_0002162: 225148
locus tag: RHAB15C_RS07290
pseudo: true
so part of: sequence
location: <6603..7158
location: region:6603-7158:1
so has part: feature:6603-7158:1:exon
subclass of: SO_0000010

position:6603:1
position: 6603
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:7158:1
position: 7158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6603-7158:1:exon

RHAB15C_RS07290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 225148
locus tag: RHAB15C_RS07290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611091.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase family protein
SIO_010081: RHAB15C_RS07290
subclass of: SO_0000673
so part of: RHAB15C_RS07290
location: <6603..7158
location: region:6603-7158:1
so has part: feature:6603-7158:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6603-7158:1:exon

RHAB15C_RS07130
type: Gene
subclass of: SO_0000704
RO_0002162: 225148
locus tag: RHAB15C_RS07130
old locus tag: RHAB15C_0001400
so part of: sequence
location: 7672..8733
location: region:7672-8733:1
so has part: feature:7672-8733:1:exon
subclass of: SO_0000010

position:7672:1
position: 7672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8733:1
position: 8733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7672-8733:1:exon

RHAB15C_RS07130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 225148
locus tag: RHAB15C_RS07130
old locus tag: RHAB15C_0001400
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MSSAYKDKTKTLPFMNAEIIELEERHKLNYKQVVEIKNERLWQALSKVNLRTAIIEWIETITNPCTKSSYTTSMKELLERGFLNPNWSLQVFGILSTNTIVDQIKVQTVYIKNKAAESAKREWSIRTKEARISCLLAFTRYLSRKTEGIITKATPNRIGLEKTFSPPSKKVKTEALSRAQLNRFLEELEQINPRDALIAKLCLHGAKRINEVLSLEIYHIDFEKRQILFKQSKSKLTDDFTIINFEKEGARALLLKLKDYIQTRKGLVFLTKNNKGVKKTQVDRNFSKAGRNAQIPFRVSAHNLRTTAITLWKEDGFSDSLIMKASGHSSSEMVHRYDRTDIADNVTSKSYLL
SIO_010081: RHAB15C_RS07130
subclass of: SO_0000673
so part of: RHAB15C_RS07130
location: 7672..8733
location: region:7672-8733:1
so has part: feature:7672-8733:1:exon

WP_194845047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7672-8733:1:exon

RHAB15C_RS07135
type: Gene
subclass of: SO_0000704
RO_0002162: 225148
locus tag: RHAB15C_RS07135
old locus tag: RHAB15C_0001401
so part of: sequence
location: complement(8837..9244)
location: region:8837-9244:-1
so has part: feature:8837-9244:-1:exon
subclass of: SO_0000010

position:8837:-1
position: 8837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9244:-1
position: 9244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8837-9244:-1:exon

RHAB15C_RS07135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 225148
locus tag: RHAB15C_RS07135
old locus tag: RHAB15C_0001401
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVDRLETPDIMSSLMSETSKQESNKEIKQEKPLRKKAIKPSSNKTILKQMFLDGTEEEITVLEELKEKATFNLSVKTLRDLEDKWIEIRRLSGSKQISKTLIVEKAIEMALAEFDLKKQIGKFYSKLVSDKDRFS
SIO_010081: RHAB15C_RS07135
subclass of: SO_0000673
so part of: RHAB15C_RS07135
location: complement(8837..9244)
location: region:8837-9244:-1
so has part: feature:8837-9244:-1:exon

WP_194845048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8837-9244:-1:exon

RHAB15C_RS07140
type: Gene
subclass of: SO_0000704
RO_0002162: 225148
locus tag: RHAB15C_RS07140
old locus tag: RHAB15C_0001402
so part of: sequence
location: complement(9234..9980)
location: region:9234-9980:-1
so has part: feature:9234-9980:-1:exon
subclass of: SO_0000010

position:9234:-1
position: 9234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9980:-1
position: 9980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9234-9980:-1:exon

RHAB15C_RS07140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 225148
locus tag: RHAB15C_RS07140
old locus tag: RHAB15C_0001402
inference: COORDINATES: protein motif:HMM:NF013793.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MRKICIALSKGGVAKSSTAVSVSHGIALSGKKVLLIDTDDQGQDAFLLGVKPKHSLADVLNEQIHVEQALFQAREGLWILSGGRGLSGVKRAIGRKDFSSEQTLSESLCSIEGKFDFVIIDTSPSWDTLTINALFYCLEVLTPVSLEVLTLNSLVEFAERLKSVQKFNRRLQHAYLLPTFWDRRVKKSSEILEQLKKYYSKQICEPVKYSVRISEAAGFGKTIYEYAPSSSGAKDYQKTVERILNYGR
SIO_010081: RHAB15C_RS07140
subclass of: SO_0000673
so part of: RHAB15C_RS07140
location: complement(9234..9980)
location: region:9234-9980:-1
so has part: feature:9234-9980:-1:exon

WP_220716089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9234-9980:-1:exon

RHAB15C_RS07145
type: Gene
subclass of: SO_0000704
RO_0002162: 225148
locus tag: RHAB15C_RS07145
old locus tag: RHAB15C_0001405
so part of: sequence
location: complement(11361..11663)
location: region:11361-11663:-1
so has part: feature:11361-11663:-1:exon
subclass of: SO_0000010

position:11361:-1
position: 11361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11663:-1
position: 11663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11361-11663:-1:exon

RHAB15C_RS07145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 225148
locus tag: RHAB15C_RS07145
old locus tag: RHAB15C_0001405
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTIGFLSSFSKKNYWTKEMQEIFYFFETCVTRNVIKPLQQSTGIKMRDKKTRMSIDVSEKEHKKIKMHVAKLGMSIRKFVTDCIQERIFQKTDKQKPDDL
SIO_010081: RHAB15C_RS07145
subclass of: SO_0000673
so part of: RHAB15C_RS07145
location: complement(11361..11663)
location: region:11361-11663:-1
so has part: feature:11361-11663:-1:exon

WP_220716088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11361-11663:-1:exon

RHAB15C_RS07150
type: Gene
subclass of: SO_0000704
RO_0002162: 225148
locus tag: RHAB15C_RS07150
old locus tag: RHAB15C_0001406
so part of: sequence
location: complement(11702..12274)
location: region:11702-12274:-1
so has part: feature:11702-12274:-1:exon
subclass of: SO_0000010

position:11702:-1
position: 11702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12274:-1
position: 12274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11702-12274:-1:exon

RHAB15C_RS07150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 225148
locus tag: RHAB15C_RS07150
old locus tag: RHAB15C_0001406
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIRQEKKQVVHTQNPRLVGCDRKGNFHGMHVFMPPYSRIYVTNQSYTTGAPKFQKETKNLNPVFQEKEDSYEYTTNISPVNTLSIHPSIAKVWVTFSGVTGEVYEGFNVMSVHKKNTGSYLISFIIPMTSTNYVPIVAAEGFNVQAAPILLKTHTLEIGTKIIEKNAKLIFHDSHTVHVVIFGNLHSSCM
SIO_010081: RHAB15C_RS07150
subclass of: SO_0000673
so part of: RHAB15C_RS07150
location: complement(11702..12274)
location: region:11702-12274:-1
so has part: feature:11702-12274:-1:exon

WP_194845908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11702-12274:-1:exon

RHAB15C_RS07155
type: Gene
subclass of: SO_0000704
RO_0002162: 225148
locus tag: RHAB15C_RS07155
old locus tag: RHAB15C_0001407
so part of: sequence
location: complement(12386..13234)
location: region:12386-13234:-1
so has part: feature:12386-13234:-1:exon
subclass of: SO_0000010

position:12386:-1
position: 12386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13234:-1
position: 13234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12386-13234:-1:exon

RHAB15C_RS07155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 225148
locus tag: RHAB15C_RS07155
old locus tag: RHAB15C_0001407
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKIANALNIPASSSTESLTLGNNNNFFGTNTLDCNGSAAFGSFAGIEATPNSLTVSDFLGVGTPTQALSNSTAEFVMSPTRLECDVYLTTYATSSSYRSALILRTAKGTAAAPTANLSGDPLGLISAGGYTGTTFTAISSAIYFSATEAWSTTANGTAINFLVTRNGTVAPLGLARMQSASASTSGLAIVYPGAGLMIKEGINCRMGRATLVAVLLSPSVVTVSNNTVTANTEIFLCSNVPSGGPGILSVTARVPGVSFTISSSAIGDTSIVAWLLIEPSP
SIO_010081: RHAB15C_RS07155
subclass of: SO_0000673
so part of: RHAB15C_RS07155
location: complement(12386..13234)
location: region:12386-13234:-1
so has part: feature:12386-13234:-1:exon

WP_194845909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12386-13234:-1:exon

RHAB15C_RS07160
type: Gene
subclass of: SO_0000704
RO_0002162: 225148
locus tag: RHAB15C_RS07160
old locus tag: RHAB15C_0001408
so part of: sequence
location: complement(13395..14237)
location: region:13395-14237:-1
so has part: feature:13395-14237:-1:exon
subclass of: SO_0000010

position:13395:-1
position: 13395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14237:-1
position: 14237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13395-14237:-1:exon

RHAB15C_RS07160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 225148
locus tag: RHAB15C_RS07160
old locus tag: RHAB15C_0001408
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTNNAINLTQSGIVAYNGTGTFFGRTFTSTGNTVTITNPNGVTASPNFEVNTTNININTLGGAPLTVANGGTGNTTLTANSLLLGNGTSATTSVPVGTNGQLLIGATGAAPAFATLTLSGGLTQTPGANSLTLTAPPITITGNGVTVTGSPVSLGGAVTLTVAAGGTPWINVTGTTQTISTNTGYIADNAAQVVFTLPATAALGDTFYITGKGSAGTAGWQLKQNASQQIFFGSSSTTAGTGGSLTSTNQLDSIRAVCVVAGASTIWNIINSVGNITVV
SIO_010081: RHAB15C_RS07160
subclass of: SO_0000673
so part of: RHAB15C_RS07160
location: complement(13395..14237)
location: region:13395-14237:-1
so has part: feature:13395-14237:-1:exon

WP_194845910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13395-14237:-1:exon

RHAB15C_RS07165
type: Gene
subclass of: SO_0000704
RO_0002162: 225148
gene: ycaC
locus tag: RHAB15C_RS07165
old locus tag: RHAB15C_0001409
so part of: sequence
location: complement(14705..15337)
location: region:14705-15337:-1
so has part: feature:14705-15337:-1:exon
subclass of: SO_0000010

position:14705:-1
position: 14705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15337:-1
position: 15337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14705-15337:-1:exon

RHAB15C_RS07165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 225148
gene: ycaC
locus tag: RHAB15C_RS07165
old locus tag: RHAB15C_0001409
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006035193.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isochorismate family cysteine hydrolase YcaC
translation: MPLSQSQVGSNRLSSDNATLLLIDHQIGLMQLVRDYEPDEFKNNILALADIGLTFNLPTILTTSFEKGPNGPLLPELKQKFPYSPYIPRPGQINAWGNEDFVKAVKKTGRKKLLIAGIVTDVCVAFPTISALAEGYEVYVVVDASGTFNRSVKEAALIRMSNAGAVLINWFALASELQKDWRNDGDKLKKILQHRLVPYAGLISSYETKK
SIO_010081: RHAB15C_RS07165
subclass of: SO_0000673
so part of: RHAB15C_RS07165
location: complement(14705..15337)
location: region:14705-15337:-1
so has part: feature:14705-15337:-1:exon

WP_194845911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14705-15337:-1:exon

RHAB15C_RS07170
type: Gene
subclass of: SO_0000704
RO_0002162: 225148
locus tag: RHAB15C_RS07170
old locus tag: RHAB15C_0001410
so part of: sequence
location: complement(15422..16267)
location: region:15422-16267:-1
so has part: feature:15422-16267:-1:exon
subclass of: SO_0000010

position:15422:-1
position: 15422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16267:-1
position: 16267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15422-16267:-1:exon

RHAB15C_RS07170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 225148
locus tag: RHAB15C_RS07170
old locus tag: RHAB15C_0001410
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKITNAINVPVSSSLTSLTLGNSSNFIGVNTLDCSGSAAFGTVAGTTAPANSLVTSPFLGIGAATQFLSGSTAEFVMPITSTECDLVQTSYVGSSATNASNLIHLTARGTALAPTANQSGDIIGEWGVRGYNGTSFSSSSMGYILMSANENWTTTANGTNISLQVTSNTTTTLKQVTSILNSSASISGVAIPDQGSGFLIKEGSNARMGVVTLSAGSATVLNSTVTANTRIFLTVNGQSSLNLLGFLRVTGRTPGVSFTISTGIALDFGSVVGWLLIEPI
SIO_010081: RHAB15C_RS07170
subclass of: SO_0000673
so part of: RHAB15C_RS07170
location: complement(15422..16267)
location: region:15422-16267:-1
so has part: feature:15422-16267:-1:exon

WP_194845912.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15422-16267:-1:exon

RHAB15C_RS07175
type: Gene
subclass of: SO_0000704
RO_0002162: 225148
locus tag: RHAB15C_RS07175
old locus tag: RHAB15C_0001411
so part of: sequence
location: complement(16293..17150)
location: region:16293-17150:-1
so has part: feature:16293-17150:-1:exon
subclass of: SO_0000010

position:16293:-1
position: 16293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17150:-1
position: 17150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16293-17150:-1:exon

RHAB15C_RS07175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 225148
locus tag: RHAB15C_RS07175
old locus tag: RHAB15C_0001411
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKIANATNTPASSLVPSLTLGNTNNFLGNNSLDCKGSGAFGAFAGIAAPPNGLIGSGFLGVRTSTQFLIGSTAEFLMPTTSSECDILQTTYAGSGSANGSNLLHLTARGTAIAPTANQNGDALGIWGVRGYNGTGFVTTSKCSISILANETWTPTANGTAISFKITSPNSTSPSEMVRALSTSASISGLAITRAGSGFMIKEGANARMGIATLVPIILAPSTVTVANNTVTANTRIFLTNNNPSGLALGEVFVLTLVPGVGFTIASLAIGDTSDIAWLLVESAP
SIO_010081: RHAB15C_RS07175
subclass of: SO_0000673
so part of: RHAB15C_RS07175
location: complement(16293..17150)
location: region:16293-17150:-1
so has part: feature:16293-17150:-1:exon

WP_194845913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16293-17150:-1:exon

RHAB15C_RS07180
type: Gene
subclass of: SO_0000704
RO_0002162: 225148
locus tag: RHAB15C_RS07180
old locus tag: RHAB15C_0001412
so part of: sequence
location: complement(17184..18023)
location: region:17184-18023:-1
so has part: feature:17184-18023:-1:exon
subclass of: SO_0000010

position:17184:-1
position: 17184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18023:-1
position: 18023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17184-18023:-1:exon

RHAB15C_RS07180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 225148
locus tag: RHAB15C_RS07180
old locus tag: RHAB15C_0001412
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKIANAINIPASSSTPAMTLGNGNDFLGTNALDCKGSGAFGTFAGTVAPANGIIVSGFLGVGTATQFLSGSTAEFVGTSPAVECDVLQTSYVGSSATNASSLLQYTARGTALAPTANQSGDLLGVWGARGYTGSAFATTSKATISMITTQNWTATNNGTTISFSVTQNGTTTLTEIARIIDTNATNTGLAITDLGSGLLVKEGLNARMGIALLVAGVVIVLNNTVTANTRIFLTNSGIAVNIGQLTIAARIPGVSFTINSNLLTAAAAVVWLMIEPSP
SIO_010081: RHAB15C_RS07180
subclass of: SO_0000673
so part of: RHAB15C_RS07180
location: complement(17184..18023)
location: region:17184-18023:-1
so has part: feature:17184-18023:-1:exon

WP_194845914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17184-18023:-1:exon

RHAB15C_RS07185
type: Gene
subclass of: SO_0000704
RO_0002162: 225148
locus tag: RHAB15C_RS07185
old locus tag: RHAB15C_0001413
so part of: sequence
location: complement(18085..18921)
location: region:18085-18921:-1
so has part: feature:18085-18921:-1:exon
subclass of: SO_0000010

position:18085:-1
position: 18085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18921:-1
position: 18921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18085-18921:-1:exon

RHAB15C_RS07185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 225148
locus tag: RHAB15C_RS07185
old locus tag: RHAB15C_0001413
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MANAINLNQTGVVTYNNTTGVFFGRTLTSAGSTVSITNPNGVNGNPNFEVNFSGININNFTGILNVTNGGTGNSTFPTNNILIGNGSGPIGSIPSGTNGQLLIGAAGGPAAFSTLTLSGGLTQTPGANSLTLTAPPITITGSGLTVTGSPVSLGGAVTLTVTGGGITWVNVTGTTQAIVVNTGYIASNAAQVVFTLPTTAALGDTFYITGNGNAGTSGWKINQNAGQVIFFGSSTTTVGTSGSLTSTNQLDSIRAVCIVPGAATVWNVIDSIGNITVV
SIO_010081: RHAB15C_RS07185
subclass of: SO_0000673
so part of: RHAB15C_RS07185
location: complement(18085..18921)
location: region:18085-18921:-1
so has part: feature:18085-18921:-1:exon

WP_194845915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18085-18921:-1:exon

RHAB15C_RS07190
type: Gene
subclass of: SO_0000704
RO_0002162: 225148
locus tag: RHAB15C_RS07190
old locus tag: RHAB15C_0001414
so part of: sequence
location: complement(19014..19529)
location: region:19014-19529:-1
so has part: feature:19014-19529:-1:exon
subclass of: SO_0000010

position:19014:-1
position: 19014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19529:-1
position: 19529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19014-19529:-1:exon

RHAB15C_RS07190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 225148
locus tag: RHAB15C_RS07190
old locus tag: RHAB15C_0001414
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAFSCDPFPSSQFGAITITGLTGGGAISPDANGNFNLGGSNISVVGNSATNTLSFTAPGASGVTWIVNTDAVVPMSVNTGYIDRFPGATNYMLPATSSVGDVLYVVGTGLGYEIHLAAGQSLFIGTEQRQGPGGFLISENLGNSIYLVATIPNTEWRAVSVQGTFGGPLGP
SIO_010081: RHAB15C_RS07190
subclass of: SO_0000673
so part of: RHAB15C_RS07190
location: complement(19014..19529)
location: region:19014-19529:-1
so has part: feature:19014-19529:-1:exon

WP_194845916.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19014-19529:-1:exon