Francisella marina strain E95-16 plasmid pE95_16_1, complete sequence.
Bacteria; Pseudomonadota; Gammaproteobacteria; Thiotrichales; Francisellaceae; Francisella.
Complete genome sequence of Francisella marina E95-16
Submitted (03-SEP-2019) Department of Medicine & Epidemiology School of Veterinary Medicine, University of California-Davis, 2108 Tupper Hall, Davis, CA 95616-5270, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP043553.1.\nBacteria and source DNA available from Esteban Soto.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Canu v. 1.8\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 76.0x\nSequencing Technology :: Illumina MiSeq; Oxford Nanopore GridION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/05/2023 04:19:18\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,026\nCDSs (total) :: 1,973\nGenes (coding) :: 1,965\nCDSs (with protein) :: 1,965\nGenes (RNA) :: 53\nrRNAs :: 4, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 3, 3 (5S, 16S, 23S)\ntRNAs :: 39\nncRNAs :: 4\nPseudo Genes (total) :: 8\nCDSs (without protein) :: 8\nPseudo Genes (ambiguous residues) :: 0 of 8\nPseudo Genes (frameshifted) :: 2 of 8\nPseudo Genes (incomplete) :: 5 of 8\nPseudo Genes (internal stop) :: 3 of 8\nPseudo Genes (multiple problems) :: 2 of 8\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_012274923.1
GO:0006260 - DNA replication [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012274925.1