Juglans microcarpa x Juglans regia isolate MS1-56 chromosome 8S, Jm3101_v1.0, whole genome shotgun sequence.
type: Entry
definition: Juglans microcarpa x Juglans regia isolate MS1-56 chromosome 8S, Jm3101_v1.0, whole genome shotgun sequence.
sequence version: NC_054609.1
sequence date: 2021-05-03
sequence: sequence
division: CON
label: NC_054609.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA726248
dblink: SAMN09474938
keyword: WGS
keyword: RefSeq
source: Juglans microcarpa x Juglans regia
organism: Juglans microcarpa x Juglans regia
taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans.
reference: 1
references: 30937174
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM015648.1.\nAssembly name: Jm3101_v1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the University of California,\nDavis on 2019/04/16. The original whole-genome shotgun project has\nthe accession QKZX00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: University of California, Davis\nAssembly Method :: FALCON v. 0.4.2\nAssembly Name :: Jm3101_v1.0\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 47x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Juglans microcarpa x Juglans regia\n Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 19962766
topology: linear
so has quality: SO_0000987
location: 1..19962766
location: region:1-19962766:1
RO_0002162: 2249226

NC_054609
type: RefSeq
SIO_000068: refseq

PRJNA726248
type: BioProject
SIO_000068: bioproject

SAMN09474938
type: BioSample
SIO_000068: biosample

1
title: Sequencing a Juglans regia x J. microcarpa hybrid yields high-quality genome assemblies of parental species
author: Zhu, T.
author: Wang, L.
author: You, F.M.
author: Rodriguez, J.C.
author: Deal, K.R.
author: Chen, L.
author: Li, J.
author: Chakraborty, S.
author: Balan, B.
author: Jiang, C.Z.
author: Brown, P.J.
author: Leslie, C.A.
author: Aradhya, M.K.
author: Dandekar, A.M.
author: McGuire, P.E.
author: Kluepfel, D.
author: Dvorak, J.
author: Luo, M.C.
journal: Hortic Res 6, 55 (2019)
pubmed: 30937174
comments: Publication Status: Online-Only

30937174
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19962766:1
position: 19962766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-19962766:1:source
so part of: sequence
organism: Juglans microcarpa x Juglans regia
mol type: genomic DNA
isolate: MS1-56
chromosome: 8S
tissue type: young leaves
dev stage: seedling
country: USA: UC Davis
note: This is the F1 progeny of a cross between Juglans microcarpa isolate 31.01 and Juglans regia cultivar Serr

2249226
type: Taxonomy
SIO_000068: taxonomy

LOC121244621
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244621
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(19459..39819)
location: region:19459-39819:-1
so has part: feature:19459-39819:-1:exon
subclass of: SO_0000010

121244621
type: Gene
SIO_000068: ncbigene

position:19459:-1
position: 19459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39819:-1
position: 39819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19459-39819:-1:exon

LOC121244621
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244621
product: katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_041142778.1
SIO_010081: LOC121244621
subclass of: SO_0000673
so part of: LOC121244621
location: complement(join(19459..19522,19617..19685,19781..19897,21249..21361,21493..21567,24359..24484,24672..24790,24869..24928,25759..26255,27030..27033,30951..30973,32706..32932,33056..33199,33274..33348,33466..33536,37585..37687,38322..38548,38803..38997,39424..39564,39792..39819))
location: region:19459-39819:-1
so has part: feature:39792-39819:-1:exon
so has part: feature:39424-39564:-1:exon
so has part: feature:38803-38997:-1:exon
so has part: feature:38322-38548:-1:exon
so has part: feature:37585-37687:-1:exon
so has part: feature:33466-33536:-1:exon
so has part: feature:33274-33348:-1:exon
so has part: feature:33056-33199:-1:exon
so has part: feature:32706-32932:-1:exon
so has part: feature:30951-30973:-1:exon
so has part: feature:27030-27033:-1:exon
so has part: feature:25759-26255:-1:exon
so has part: feature:24869-24928:-1:exon
so has part: feature:24672-24790:-1:exon
so has part: feature:24359-24484:-1:exon
so has part: feature:21493-21567:-1:exon
so has part: feature:21249-21361:-1:exon
so has part: feature:19781-19897:-1:exon
so has part: feature:19617-19685:-1:exon
so has part: feature:19459-19522:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39792-39819:-1:exon

position:39792:-1
position: 39792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:39424-39564:-1:exon

position:39424:-1
position: 39424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39564:-1
position: 39564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:38803-38997:-1:exon

position:38803:-1
position: 38803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38997:-1
position: 38997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:38322-38548:-1:exon

position:38322:-1
position: 38322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38548:-1
position: 38548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:37585-37687:-1:exon

position:37585:-1
position: 37585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37687:-1
position: 37687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:33466-33536:-1:exon

position:33466:-1
position: 33466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33536:-1
position: 33536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:33274-33348:-1:exon

position:33274:-1
position: 33274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33348:-1
position: 33348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:33056-33199:-1:exon

position:33056:-1
position: 33056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33199:-1
position: 33199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:32706-32932:-1:exon

position:32706:-1
position: 32706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32932:-1
position: 32932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:30951-30973:-1:exon

position:30951:-1
position: 30951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30973:-1
position: 30973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:27030-27033:-1:exon

position:27030:-1
position: 27030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27033:-1
position: 27033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:25759-26255:-1:exon

position:25759:-1
position: 25759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26255:-1
position: 26255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:24869-24928:-1:exon

position:24869:-1
position: 24869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24928:-1
position: 24928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:24672-24790:-1:exon

position:24672:-1
position: 24672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24790:-1
position: 24790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:24359-24484:-1:exon

position:24359:-1
position: 24359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24484:-1
position: 24484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:21493-21567:-1:exon

position:21493:-1
position: 21493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21567:-1
position: 21567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:21249-21361:-1:exon

position:21249:-1
position: 21249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21361:-1
position: 21361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:19781-19897:-1:exon

position:19781:-1
position: 19781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19897:-1
position: 19897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:19617-19685:-1:exon

position:19617:-1
position: 19617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19685:-1
position: 19685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:19459-19522:-1:exon

position:19522:-1
position: 19522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121244621
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244621
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(38541..38543),aa:OTHER)
transl except: (pos:complement(26162..26164),aa:OTHER)
product: LOW QUALITY PROTEIN: katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4
translation: MTTKRAYKLQEFVAHSSSVNCLKIGKNSSRILVTGGEDYQVKLWAIGKPNAILVRSHDLLFNLFSWTWNCCIYNLIIFLLYQSFSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVXTLTGHRSNCICLDFHPFGEFFASGSLDTNLKVWDIRKKGCIHMYKGHTRGVNAIRFSPDGRWIISGGEDNTLKLWDLTAGKLLHDFKCHEGKVQCIDFHPHEFLLATGSADKTVKFWNLETFGLLGSAGPETTGVRCLTFNPDGRTLLCGLHENLKVFSWEPIRCHDAVDVGWSRLSDLNIHEGKLLGCSHNQSCVGVWVVDISCIEPCAVTNDTRLNGHSESKSSASGNLSILNENNAQASGVRLPVAQNAYCLHKETKSLGRLLVSQSSEEPKVLACIDSCDGSPQKIILNACPKTILASSMVVPSGTTLKRNSTKSXSTSNVLIINKLDVTPIIVSRSNMKLEQAVESRKECGVSGRTMPFSLQSKAIDFQKFPNIRDEADKPLVSVLPEFIGFKAVDLGNGANRNIFPSVRSSIQGVFAIEKSRKDDGLIGSRKQDMNSMMDPVASYKHENDAWGHKVSRDACSIESQKGGRMRSLVVNWDAKERSSTCQEPTSSIPHGTISAAKMLPTNRGYLPSAEKEMVSASDEDAIAGVMEQHGQFVSSMQSRSAKLQIVYRYWEKSDVKTVISAMAKMADNAVVADVISIMTVNIDVVTLDICTCLLPLLTGLLESEIDRHLSISLDLLLKVVRIFGSVIYSTLSASSSVGVDIEAEQRLERCNLCFIELERVKRSLPALTRTRVSAAKSAQEFNLALQEVS
SIO_010081: LOC121244621
subclass of: SO_0000673
so part of: LOC121244621
location: complement(join(19459..19522,19617..19685,19781..19897,21249..21361,21493..21567,24359..24484,24672..24790,24869..24928,25759..26255,27030..27033,30951..30973,32706..32932,33056..33199,33274..33348,33466..33536,37585..37687,38322..38548,38803..38997,39424..39564,39792..39819))
location: region:19459-39819:-1
so has part: feature:39792-39819:-1:exon
so has part: feature:39424-39564:-1:exon
so has part: feature:38803-38997:-1:exon
so has part: feature:38322-38548:-1:exon
so has part: feature:37585-37687:-1:exon
so has part: feature:33466-33536:-1:exon
so has part: feature:33274-33348:-1:exon
so has part: feature:33056-33199:-1:exon
so has part: feature:32706-32932:-1:exon
so has part: feature:30951-30973:-1:exon
so has part: feature:27030-27033:-1:exon
so has part: feature:25759-26255:-1:exon
so has part: feature:24869-24928:-1:exon
so has part: feature:24672-24790:-1:exon
so has part: feature:24359-24484:-1:exon
so has part: feature:21493-21567:-1:exon
so has part: feature:21249-21361:-1:exon
so has part: feature:19781-19897:-1:exon
so has part: feature:19617-19685:-1:exon
so has part: feature:19459-19522:-1:exon

XP_040998712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39792-39819:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:39424-39564:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:38803-38997:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:38322-38548:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:37585-37687:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:33466-33536:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:33274-33348:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:33056-33199:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:32706-32932:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:30951-30973:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27030-27033:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:25759-26255:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:24869-24928:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:24672-24790:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:24359-24484:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:21493-21567:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:21249-21361:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:19781-19897:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:19617-19685:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:19459-19522:-1:exon

LOC121244742
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244742
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(51263..51844)
location: region:51263-51844:-1
so has part: feature:51263-51844:-1:exon
subclass of: SO_0000010

121244742
type: Gene
SIO_000068: ncbigene

position:51263:-1
position: 51263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51844:-1
position: 51844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51263-51844:-1:exon

LOC121244742
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244742
product: uncharacterized LOC121244742
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_041142945.1
SIO_010081: LOC121244742
subclass of: SO_0000673
so part of: LOC121244742
location: complement(51263..51844)
location: region:51263-51844:-1
so has part: feature:51263-51844:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51263-51844:-1:exon

LOC121244742
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244742
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121244742
translation: MDVLSRMMEGMVDWGFISGFSVGDSSRSISVTHLLFADDTLIFCDPDPDQICSMRALLLCFEAVSSLKVNLTRSEIVPVGLVNNLNKVAAILGCKVSSLPVKYLGLLLGASHKSKAMWDGIVEKIERKLEVWKRIYLSKGGRITLLKSTLSNLPWYFLSLFPLPAILANRLENLYCDFLWGGLEDEKKIHLIK
SIO_010081: LOC121244742
subclass of: SO_0000673
so part of: LOC121244742
location: complement(51263..51844)
location: region:51263-51844:-1
so has part: feature:51263-51844:-1:exon

XP_040998879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51263-51844:-1:exon

LOC121244679
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(57758..58554)
location: region:57758-58554:-1
so has part: feature:57758-58554:-1:exon
subclass of: SO_0000010

121244679
type: Gene
SIO_000068: ncbigene

position:57758:-1
position: 57758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58554:-1
position: 58554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57758-58554:-1:exon

LOC121244679
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244679
product: ferredoxin-thioredoxin reductase, variable chain, chloroplastic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 18 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041142853.1
SIO_010081: LOC121244679
subclass of: SO_0000673
so part of: LOC121244679
location: complement(57758..58554)
location: region:57758-58554:-1
so has part: feature:57758-58554:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:57758-58554:-1:exon

LOC121244679
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ferredoxin-thioredoxin reductase, variable chain, chloroplastic
translation: MTGPTPITAVSLLSPPAAPISSRSLSSLPSTVHTTGRTGNHSTKPATTTNMKSSTPWCSSMNVTSLAVSAAVSPGITAPQHLNIRRRKRTISCEISLESDSTTVIRASSEEAKIGARVRVKVPLKVHHVPRLPEVDLTGMEGELKQYVGLWKGRRISANLPYKVEFLTEIQGRGPVKFFAHLKEDEFEYL
SIO_010081: LOC121244679
subclass of: SO_0000673
so part of: LOC121244679
location: complement(57875..58447)
location: region:57875-58447:-1
so has part: feature:57875-58447:-1:exon

XP_040998787.1
type: Protein
SIO_000068: ncbiprotein

position:57875:-1
position: 57875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58447:-1
position: 58447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57875-58447:-1:exon

LOC121244955
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244955
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(61033..75992)
location: region:61033-75992:-1
so has part: feature:61033-75992:-1:exon
subclass of: SO_0000010

121244955
type: Gene
SIO_000068: ncbigene

position:61033:-1
position: 61033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75992:-1
position: 75992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61033-75992:-1:exon

LOC121244955
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244955
product: sphingoid long-chain bases kinase 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_041143207.1
SIO_010081: LOC121244955
subclass of: SO_0000673
so part of: LOC121244955
location: complement(join(61033..61387,61811..62751,64399..64498,66605..66751,70195..70232,70355..70448,74397..74768,74883..75568,75812..75992))
location: region:61033-75992:-1
so has part: feature:75812-75992:-1:exon
so has part: feature:74883-75568:-1:exon
so has part: feature:74397-74768:-1:exon
so has part: feature:70355-70448:-1:exon
so has part: feature:70195-70232:-1:exon
so has part: feature:66605-66751:-1:exon
so has part: feature:64399-64498:-1:exon
so has part: feature:61811-62751:-1:exon
so has part: feature:61033-61387:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:75812-75992:-1:exon

position:75812:-1
position: 75812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:74883-75568:-1:exon

position:74883:-1
position: 74883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75568:-1
position: 75568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:74397-74768:-1:exon

position:74397:-1
position: 74397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74768:-1
position: 74768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:70355-70448:-1:exon

position:70355:-1
position: 70355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70448:-1
position: 70448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:70195-70232:-1:exon

position:70195:-1
position: 70195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70232:-1
position: 70232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:66605-66751:-1:exon

position:66605:-1
position: 66605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66751:-1
position: 66751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:64399-64498:-1:exon

position:64399:-1
position: 64399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64498:-1
position: 64498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:61811-62751:-1:exon

position:61811:-1
position: 61811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62751:-1
position: 62751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:61033-61387:-1:exon

position:61387:-1
position: 61387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121244955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244955
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: sphingoid long-chain bases kinase 1
translation: MQKSASLSRHSNSVNTPSSLRLITPPQSLRRLGLCSQIATGGQHSSPIVFPXKRNKAKASTRRSSEVSAGGTAPAAPADDPDKAKTFEHRIDIGGPAAAGGDEKSDLLGCAVFSGKLIWDKRKTSSENTTHAQQTSTTDITSQEAVDAKLTSRALVWSSHMLNLDDVVSVSYNVGLRHFTVHSYPLKKGSRCLSCLIKPQRSRKDFRFFAPTMEEAVGWVAGFADQQCFVNCLPHPLVSSKKQASSELLPPDTPPELLFKCKNPPKMLVILNPRSGRGRSSKVFHGIVEPIFKLAGFKLEVIKTTSAGHARKLASSVDINTCPDGIICVGGDGIINEVLNGLLTRDNQKEGISIPIGIIPAGSDNSLVWTVLGVRDPVSAAMAIVKGGLTATDVFAIEWIQRGVIHFGMTVSYFGFVSDVLELSEKYQKRFGPLRYFVAGFLKFLCLPKYNYEVEYLPASKEDREGNFTTEQEVVDISELYTDIMRRSSKDGIPRASSLSSIDSIMTPSRMSGGDLDTTCSSTHASTEPSEYVRGLDPKAKRLSSGRSNVTAETEVIHPQLPLSTTPNWPRTRSKSRADKGWTGLTATNDTSRCSWTNAATNDKEDISSTLSDPGPIWDSEPKWDSEPNWDVEKPIELPGPSDDVETGMRREVMPRCEDKWVVTKGQYLGILVCNHACRTVQNSQVVAPRSEHDDNTMDLLLVHGSGRLRLLRFFILLQLGRHLSLPYVEYVKVKSVKIKPGKHTHNGCGIDGELFPLNEQVISSLLPEQCRLIGRFRSHHV
SIO_010081: LOC121244955
subclass of: SO_0000673
so part of: LOC121244955
location: complement(join(61238..61387,61811..62751,64399..64498,66605..66751,70195..70232,70355..70448,74397..74768,74883..75388))
location: region:61238-75388:-1
so has part: feature:74883-75388:-1:exon
so has part: feature:74397-74768:-1:exon
so has part: feature:70355-70448:-1:exon
so has part: feature:70195-70232:-1:exon
so has part: feature:66605-66751:-1:exon
so has part: feature:64399-64498:-1:exon
so has part: feature:61811-62751:-1:exon
so has part: feature:61238-61387:-1:exon

XP_040999141.1
type: Protein
SIO_000068: ncbiprotein

position:61238:-1
position: 61238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75388:-1
position: 75388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74883-75388:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:74397-74768:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:70355-70448:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:70195-70232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:66605-66751:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:64399-64498:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:61811-62751:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:61238-61387:-1:exon

LOC121244512
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244512
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(87565..91531)
location: region:87565-91531:-1
so has part: feature:87565-91531:-1:exon
subclass of: SO_0000010

121244512
type: Gene
SIO_000068: ncbigene

position:87565:-1
position: 87565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91531:-1
position: 91531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87565-91531:-1:exon

LOC121244512
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244512
product: pyruvate kinase, cytosolic isozyme
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 58 long SRA reads, 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_041142610.1
SIO_010081: LOC121244512
subclass of: SO_0000673
so part of: LOC121244512
location: complement(join(87565..88602,89167..89628,91112..91531))
location: region:87565-91531:-1
so has part: feature:91112-91531:-1:exon
so has part: feature:89167-89628:-1:exon
so has part: feature:87565-88602:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:91112-91531:-1:exon

position:91112:-1
position: 91112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:89167-89628:-1:exon

position:89167:-1
position: 89167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89628:-1
position: 89628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:87565-88602:-1:exon

position:88602:-1
position: 88602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121244512
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244512
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyruvate kinase, cytosolic isozyme
translation: MANIDIEGMLKELPNDGRLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHDYHQETLNNLRIAMHNTQILCAVMLDTKGPEIRTGFLKDSKPIQLKEGQEITVTTDYSIKGDEEMISMSYKKLAEDLKPGNTILCADGTITLNVLSCNADAGTVRCRCQNTAILGERKNVNLPGVVVDLPTLTEKDTEDILQWGVPNKIDMIALSFVRKGSDLVNVRKVLGLHSKNIQLMSKVENQEGVINFDEILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPELAVKIMARICIEAESSLDYGAIFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVMTRGGTTAKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDETPARHSLIYRGLIPLLAEGSAKATDAESTEVILEAALKSATEKGLCKPGDAVVALHRIGAASVIKICVVK
SIO_010081: LOC121244512
subclass of: SO_0000673
so part of: LOC121244512
location: complement(join(87790..88602,89167..89628,91112..91369))
location: region:87790-91369:-1
so has part: feature:91112-91369:-1:exon
so has part: feature:89167-89628:-1:exon
so has part: feature:87790-88602:-1:exon

XP_040998544.1
type: Protein
SIO_000068: ncbiprotein

position:87790:-1
position: 87790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91369:-1
position: 91369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91112-91369:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:89167-89628:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:87790-88602:-1:exon

LOC121244365
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244365
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(92474..99426)
location: region:92474-99426:-1
so has part: feature:92474-99426:-1:exon
subclass of: SO_0000010

121244365
type: Gene
SIO_000068: ncbigene

position:92474:-1
position: 92474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99426:-1
position: 99426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92474-99426:-1:exon

LOC121244365
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244365
product: WD repeat-containing protein 26 homolog
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 long SRA reads, 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041142412.1
SIO_010081: LOC121244365
subclass of: SO_0000673
so part of: LOC121244365
location: complement(join(92474..92871,93818..94447,94728..94840,96852..97663,99129..99426))
location: region:92474-99426:-1
so has part: feature:99129-99426:-1:exon
so has part: feature:96852-97663:-1:exon
so has part: feature:94728-94840:-1:exon
so has part: feature:93818-94447:-1:exon
so has part: feature:92474-92871:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:99129-99426:-1:exon

position:99129:-1
position: 99129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:96852-97663:-1:exon

position:96852:-1
position: 96852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97663:-1
position: 97663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:94728-94840:-1:exon

position:94728:-1
position: 94728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94840:-1
position: 94840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:93818-94447:-1:exon

position:93818:-1
position: 93818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94447:-1
position: 94447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:92474-92871:-1:exon

position:92871:-1
position: 92871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121244365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244365
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: WD repeat-containing protein 26 homolog
translation: MRGIEDNEPPLKRTKIRLAESNSLLEDLSHMQPVACSMGYSMARPLPSHGDEETIGLKGIIKRAEFIKIITRALYSLXYDKSGALLEEESGITLHSLIYNLLMQQVNDGKWNECVAMLHTIGVLDEKTVKXQSFLILEQKFLELLKMEKVTNALDTLRNEIVPLCVNVSRVHELAACIVSPSQYVRLGLSSQDTDVVKSWLNILEKLQKVLPAAVMTPGKRLEHLVEQALDVQRDACIFHNTLDSDLSLYSDHQCGKNQIPSRIRQILQKHTNEVWFLEFSHAGKYLASSSKDQSTIIWEVKEDGHVSLKHKLTGHQKPVLMVSWGPDDHQLLTCGLEEVIKRWDAISGECLLVYEKNGVGLISCGWFPDGRGIFSGMTDKSICLWDLDGRELECWKGQQTLRISDMAVTDDGKRIISICRETSILLLDREAKFERLIEEEVAITSFSLSKDNKFLLVNLINQEIHLWSIEGDLKVVAKCKGHKRARFVIRSCLGGFKQAFIASGSEDSQVYIWHRGSEELLLALLGHSGAVNCVSWNPTNLHMLASASDDHTIRIWGLDEFNLIRRDSQSNGITRCSDGRI
SIO_010081: LOC121244365
subclass of: SO_0000673
so part of: LOC121244365
location: complement(join(92653..92871,93818..94447,94728..94840,96852..97635))
location: region:92653-97635:-1
so has part: feature:96852-97635:-1:exon
so has part: feature:94728-94840:-1:exon
so has part: feature:93818-94447:-1:exon
so has part: feature:92653-92871:-1:exon

XP_040998346.1
type: Protein
SIO_000068: ncbiprotein

position:92653:-1
position: 92653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97635:-1
position: 97635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96852-97635:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94728-94840:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93818-94447:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:92653-92871:-1:exon

LOC121243962
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121243962
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(109216..112778)
location: region:109216-112778:-1
so has part: feature:109216-112778:-1:exon
subclass of: SO_0000010

121243962
type: Gene
SIO_000068: ncbigene

position:109216:-1
position: 109216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112778:-1
position: 112778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109216-112778:-1:exon

LOC121243962
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121243962
product: uncharacterized LOC121243962, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_041142017.1
SIO_010081: LOC121243962
subclass of: SO_0000673
so part of: LOC121243962
location: complement(join(109216..109525,109609..109670,110293..110390,111578..111755,112027..112128,112216..112778))
location: region:109216-112778:-1
so has part: feature:112216-112778:-1:exon
so has part: feature:112027-112128:-1:exon
so has part: feature:111578-111755:-1:exon
so has part: feature:110293-110390:-1:exon
so has part: feature:109609-109670:-1:exon
so has part: feature:109216-109525:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:112216-112778:-1:exon

position:112216:-1
position: 112216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:112027-112128:-1:exon

position:112027:-1
position: 112027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112128:-1
position: 112128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:111578-111755:-1:exon

position:111578:-1
position: 111578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111755:-1
position: 111755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:110293-110390:-1:exon

position:110293:-1
position: 110293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110390:-1
position: 110390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:109609-109670:-1:exon

position:109609:-1
position: 109609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109670:-1
position: 109670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:109216-109525:-1:exon

position:109525:-1
position: 109525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121243962
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121243962
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121243962 isoform X1
translation: MAMAAAACTCSYASQLLPRSKFSTFAFPSSSVSCTAHSVIQIPRLRTIHRNPSTRLAAAKKDLNAVPQEQGKKQKKEQVVEEEEDLPWIQDKALDLVEFTGSVAQAIPGPRVGSSSLPWILALPLVYAGLTFVIAFVKTVRKFTSPREKRRRLVNKNVMLCKSIDEVFLEERDNETLDDALKRLERKTGFGMEEILRKYIRYALNEKPFNPDLISNLIELRKASMLDDSQVTEILNEISRRIVRDKGPVVLDMSGYSEKGFKRKLAVQALFGKVFYLSELPDFCSRDSSLVVKEIFGVTDEDADKLRIHTLSKAGDMDSLEKMVDGSDSEDSSGRSSYAA
SIO_010081: LOC121243962
subclass of: SO_0000673
so part of: LOC121243962
location: complement(join(109402..109525,109609..109670,110293..110390,111578..111755,112027..112128,112216..112674))
location: region:109402-112674:-1
so has part: feature:112216-112674:-1:exon
so has part: feature:112027-112128:-1:exon
so has part: feature:111578-111755:-1:exon
so has part: feature:110293-110390:-1:exon
so has part: feature:109609-109670:-1:exon
so has part: feature:109402-109525:-1:exon

XP_040997951.1
type: Protein
SIO_000068: ncbiprotein

position:109402:-1
position: 109402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112674:-1
position: 112674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112216-112674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:112027-112128:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111578-111755:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:110293-110390:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:109609-109670:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:109402-109525:-1:exon

LOC121243962
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121243962
product: uncharacterized LOC121243962, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_041142018.1
SIO_010081: LOC121243962
subclass of: SO_0000673
so part of: LOC121243962
location: complement(join(109818..110152,110294..110390,111578..111755,112027..112128,112216..112769))
location: region:109818-112769:-1
so has part: feature:112216-112769:-1:exon
so has part: feature:112027-112128:-1:exon
so has part: feature:111578-111755:-1:exon
so has part: feature:110294-110390:-1:exon
so has part: feature:109818-110152:-1:exon

position:109818:-1
position: 109818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112769:-1
position: 112769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112216-112769:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:112027-112128:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111578-111755:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:110294-110390:-1:exon

position:110294:-1
position: 110294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:109818-110152:-1:exon

position:110152:-1
position: 110152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121243962
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121243962
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121243962 isoform X2
translation: MAMAAAACTCSYASQLLPRSKFSTFAFPSSSVSCTAHSVIQIPRLRTIHRNPSTRLAAAKKDLNAVPQEQGKKQKKEQVVEEEEDLPWIQDKALDLVEFTGSVAQAIPGPRVGSSSLPWILALPLVYAGLTFVIAFVKTVRKFTSPREKRRRLVNKNVMLCKSIDEVFLEERDNETLDDALKRLERKTGFGMEEILRKYIRYALNEKPFNPDLISNLIELRKASMLDDSQVTEILNEISRRIVRDKGPVVLDMSGYSEKGFKRKLAVQALFGKVFYLSE
SIO_010081: LOC121243962
subclass of: SO_0000673
so part of: LOC121243962
location: complement(join(110149..110152,110294..110390,111578..111755,112027..112128,112216..112674))
location: region:110149-112674:-1
so has part: feature:112216-112674:-1:exon
so has part: feature:112027-112128:-1:exon
so has part: feature:111578-111755:-1:exon
so has part: feature:110294-110390:-1:exon
so has part: feature:110149-110152:-1:exon

XP_040997952.1
type: Protein
SIO_000068: ncbiprotein

position:110149:-1
position: 110149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112216-112674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:112027-112128:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111578-111755:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:110294-110390:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:110149-110152:-1:exon

LOC121243964
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121243964
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(122367..126883)
location: region:122367-126883:-1
so has part: feature:122367-126883:-1:exon
subclass of: SO_0000010

121243964
type: Gene
SIO_000068: ncbigene

position:122367:-1
position: 122367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126883:-1
position: 126883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122367-126883:-1:exon

LOC121243964
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121243964
product: mitochondrial intermembrane space import and assembly protein 40 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_041142020.1
SIO_010081: LOC121243964
subclass of: SO_0000673
so part of: LOC121243964
location: complement(join(122367..122726,124303..124428,124506..124537,126636..126871))
location: region:122367-126871:-1
so has part: feature:126636-126871:-1:exon
so has part: feature:124506-124537:-1:exon
so has part: feature:124303-124428:-1:exon
so has part: feature:122367-122726:-1:exon

position:126871:-1
position: 126871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126636-126871:-1:exon

position:126636:-1
position: 126636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:124506-124537:-1:exon

position:124506:-1
position: 124506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124537:-1
position: 124537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:124303-124428:-1:exon

position:124303:-1
position: 124303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124428:-1
position: 124428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:122367-122726:-1:exon

position:122726:-1
position: 122726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121243964
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121243964
product: mitochondrial intermembrane space import and assembly protein 40 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_041142021.1
SIO_010081: LOC121243964
subclass of: SO_0000673
so part of: LOC121243964
location: complement(join(122480..122653,124303..124428,124506..124537,126636..126883))
location: region:122480-126883:-1
so has part: feature:126636-126883:-1:exon
so has part: feature:124506-124537:-1:exon
so has part: feature:124303-124428:-1:exon
so has part: feature:122480-122653:-1:exon

position:122480:-1
position: 122480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126636-126883:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:124506-124537:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:124303-124428:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:122480-122653:-1:exon

position:122653:-1
position: 122653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121243964
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121243964
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial intermembrane space import and assembly protein 40 homolog isoform X1
translation: MGQVQSDVAAAVDEGEQFSPATLPDAEATPPPPSMESLIAEAASYGNNESESLDAKAQKALECPCIADLRNGQCGVQFSEAFFCYLKSTAEEKGSDCVHPFVTLQNCIKANPNAFSKGILEEGKVKEGEEPTQEYIRLPLWSRESKSSKSKL
SIO_010081: LOC121243964
subclass of: SO_0000673
so part of: LOC121243964
location: complement(join(122547..122726,124303..124428,124506..124537,126636..126756))
location: region:122547-126756:-1
so has part: feature:126636-126756:-1:exon
so has part: feature:124506-124537:-1:exon
so has part: feature:124303-124428:-1:exon
so has part: feature:122547-122726:-1:exon

XP_040997954.1
type: Protein
SIO_000068: ncbiprotein

position:122547:-1
position: 122547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126756:-1
position: 126756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126636-126756:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:124506-124537:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:124303-124428:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:122547-122726:-1:exon

LOC121243964
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121243964
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial intermembrane space import and assembly protein 40 homolog isoform X2
translation: MGQVQSDVAAAVDEGEQFSPATLPDAEATPPPPSMESLIAEAASYGNNESESLDAKAQKALECPCIADLRNGQCGVQFSEAFFCYLKSTAEEKAS
SIO_010081: LOC121243964
subclass of: SO_0000673
so part of: LOC121243964
location: complement(join(122645..122653,124303..124428,124506..124537,126636..126756))
location: region:122645-126756:-1
so has part: feature:126636-126756:-1:exon
so has part: feature:124506-124537:-1:exon
so has part: feature:124303-124428:-1:exon
so has part: feature:122645-122653:-1:exon

XP_040997955.1
type: Protein
SIO_000068: ncbiprotein

position:122645:-1
position: 122645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126636-126756:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:124506-124537:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:124303-124428:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:122645-122653:-1:exon

LOC121243963
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121243963
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 128187..135972
location: region:128187-135972:1
so has part: feature:128187-135972:1:exon
subclass of: SO_0000010

121243963
type: Gene
SIO_000068: ncbigene

position:128187:1
position: 128187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135972:1
position: 135972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128187-135972:1:exon

LOC121243963
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121243963
product: uncharacterized LOC121243963
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 105 samples with support for all annotated introns
transcript id: XM_041142019.1
SIO_010081: LOC121243963
subclass of: SO_0000673
so part of: LOC121243963
location: join(128187..128497,129742..129976,130119..130205,130309..130478,131212..131351,131844..132021,132119..132740,133797..133909,134062..134305,135563..135972)
location: region:128187-135972:1
so has part: feature:128187-128497:1:exon
so has part: feature:129742-129976:1:exon
so has part: feature:130119-130205:1:exon
so has part: feature:130309-130478:1:exon
so has part: feature:131212-131351:1:exon
so has part: feature:131844-132021:1:exon
so has part: feature:132119-132740:1:exon
so has part: feature:133797-133909:1:exon
so has part: feature:134062-134305:1:exon
so has part: feature:135563-135972:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:128187-128497:1:exon

position:128497:1
position: 128497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:129742-129976:1:exon

position:129742:1
position: 129742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129976:1
position: 129976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:130119-130205:1:exon

position:130119:1
position: 130119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130205:1
position: 130205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:130309-130478:1:exon

position:130309:1
position: 130309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130478:1
position: 130478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:131212-131351:1:exon

position:131212:1
position: 131212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131351:1
position: 131351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:131844-132021:1:exon

position:131844:1
position: 131844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132021:1
position: 132021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:132119-132740:1:exon

position:132119:1
position: 132119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132740:1
position: 132740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:133797-133909:1:exon

position:133797:1
position: 133797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133909:1
position: 133909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:134062-134305:1:exon

position:134062:1
position: 134062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134305:1
position: 134305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:135563-135972:1:exon

position:135563:1
position: 135563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121243963
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121243963
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121243963
translation: MENANAKVVGILENLMRSHSYVFNRKRSNDSPPDSPDPIPQLSALANSVVFRCSKILQVPTEDLLHCFETELPESVQNILTYARHFLEFCSYQALNLLIKSPDYLSDKEFRHLTYDMMLAWEAPNIESETPDKENASCSNEEVEGDDGWSLFYSNSTTMAIQVDEKKTVGREAFARIAPVCAVVADIITVHNLFDALTSSSGHRLHFLVYDKYIRSLDKIIKSAKNAFASSIGNLHLSEGEIVIDVDGTVPTQPVLQHVGISAWPGRLTLTNNALYFESLGVGLYDQAIRYDLATDMKQVIKPELTGPLGARLFDKAVMYKSTSIAEPVYLEFPEFKGNSRRDYWLDVCLEILHAHRFIRKHNFKGIQKLEVLARAIIGILRFRAVREASNFSASHYKTLLAFNLAESLPGGDTILETLSCRLALLNVGATHHDGTGTACAKRWSTLSPTKWQPTLSPVSLLTLDRLGFTLQKEANLDGEVVMVGEVCVGEINPLEMAVKQSVLETGRAEAAQATVDQVKVEGIDTNVAVMKELLFPVIESARRLQLLASWEDPTKSTVFLVLTGYTILREWIRYMLPAIFFVMSILMLWRKHFNRGKTLATFRVTPPPNRNAVEQLLALQEAITQVEALIQAGNIILLKIRALLFAIPPQATDKVALLLVFMAAAFAFVPLRYVVLLVFLEFFTREMPYRKESSDRWVRRVKEWWVKIPAAPVQLLKVDDDKKKK
SIO_010081: LOC121243963
subclass of: SO_0000673
so part of: LOC121243963
location: join(128334..128497,129742..129976,130119..130205,130309..130478,131212..131351,131844..132021,132119..132740,133797..133909,134062..134305,135563..135790)
location: region:128334-135790:1
so has part: feature:128334-128497:1:exon
so has part: feature:129742-129976:1:exon
so has part: feature:130119-130205:1:exon
so has part: feature:130309-130478:1:exon
so has part: feature:131212-131351:1:exon
so has part: feature:131844-132021:1:exon
so has part: feature:132119-132740:1:exon
so has part: feature:133797-133909:1:exon
so has part: feature:134062-134305:1:exon
so has part: feature:135563-135790:1:exon

XP_040997953.1
type: Protein
SIO_000068: ncbiprotein

position:128334:1
position: 128334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135790:1
position: 135790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128334-128497:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:129742-129976:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130119-130205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:130309-130478:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:131212-131351:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131844-132021:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:132119-132740:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133797-133909:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:134062-134305:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:135563-135790:1:exon

LOC121243965
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121243965
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(136245..140988)
location: region:136245-140988:-1
so has part: feature:136245-140988:-1:exon
subclass of: SO_0000010

121243965
type: Gene
SIO_000068: ncbigene

position:136245:-1
position: 136245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140988:-1
position: 140988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136245-140988:-1:exon

LOC121243965
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121243965
product: G patch domain and ankyrin repeat-containing protein 1 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_041142023.1
SIO_010081: LOC121243965
subclass of: SO_0000673
so part of: LOC121243965
location: complement(join(136245..136542,138466..138588,140579..140632,140804..140988))
location: region:136245-140988:-1
so has part: feature:140804-140988:-1:exon
so has part: feature:140579-140632:-1:exon
so has part: feature:138466-138588:-1:exon
so has part: feature:136245-136542:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:140804-140988:-1:exon

position:140804:-1
position: 140804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:140579-140632:-1:exon

position:140579:-1
position: 140579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140632:-1
position: 140632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:138466-138588:-1:exon

position:138466:-1
position: 138466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138588:-1
position: 138588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:136245-136542:-1:exon

position:136542:-1
position: 136542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121243965
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121243965
product: G patch domain and ankyrin repeat-containing protein 1 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_041142022.1
SIO_010081: LOC121243965
subclass of: SO_0000673
so part of: LOC121243965
location: complement(join(136245..136560,138466..138588,140579..140632,140804..140964))
location: region:136245-140964:-1
so has part: feature:140804-140964:-1:exon
so has part: feature:140579-140632:-1:exon
so has part: feature:138466-138588:-1:exon
so has part: feature:136245-136560:-1:exon

position:140964:-1
position: 140964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140804-140964:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140579-140632:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138466-138588:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:136245-136560:-1:exon

position:136560:-1
position: 136560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121243965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121243965
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain and ankyrin repeat-containing protein 1 homolog isoform X2
translation: MAMGGDSSSKDGSSIDSSNIGFLLLKKHGWKEGTGLGACEQGRLEPVQAYLKNNKRGLGADKVKMVAKKSYVTAASNEKNDQKCKTLSKRMRKMKELEKQLQDKEFERAFYREFWPDNV
SIO_010081: LOC121243965
subclass of: SO_0000673
so part of: LOC121243965
location: complement(join(136429..136542,138466..138588,140579..140632,140804..140872))
location: region:136429-140872:-1
so has part: feature:140804-140872:-1:exon
so has part: feature:140579-140632:-1:exon
so has part: feature:138466-138588:-1:exon
so has part: feature:136429-136542:-1:exon

XP_040997957.1
type: Protein
SIO_000068: ncbiprotein

position:136429:-1
position: 136429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140872:-1
position: 140872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140804-140872:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140579-140632:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138466-138588:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:136429-136542:-1:exon

LOC121243965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121243965
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain and ankyrin repeat-containing protein 1 homolog isoform X1
translation: MAMGGDSSSKDGSSIDSSNIGFLLLKKHGWKEGTGLGACEQGRLEPVQAYLKNNKRGLGADKVKMVAKKSYVTAASNEKNDQDNLPLKKCKTLSKRMRKMKELEKQLQDKEFERAFYREFWPDNV
SIO_010081: LOC121243965
subclass of: SO_0000673
so part of: LOC121243965
location: complement(join(136429..136560,138466..138588,140579..140632,140804..140872))
location: region:136429-140872:-1
so has part: feature:140804-140872:-1:exon
so has part: feature:140579-140632:-1:exon
so has part: feature:138466-138588:-1:exon
so has part: feature:136429-136560:-1:exon

XP_040997956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140804-140872:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140579-140632:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138466-138588:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:136429-136560:-1:exon

LOC121244720
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244720
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 148022..173468
location: region:148022-173468:1
so has part: feature:148022-173468:1:exon
subclass of: SO_0000010

121244720
type: Gene
SIO_000068: ncbigene

position:148022:1
position: 148022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173468:1
position: 173468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148022-173468:1:exon

LOC121244720
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244720
product: phytochrome-associated serine/threonine-protein phosphatase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 89 samples with support for all annotated introns
transcript id: XM_041142913.1
SIO_010081: LOC121244720
subclass of: SO_0000673
so part of: LOC121244720
location: join(148022..148231,149563..149709,149815..149882,161182..161239,162024..162047,162138..162248,162362..162412,171421..171564,171636..171731,171816..171887,173050..173468)
location: region:148022-173468:1
so has part: feature:148022-148231:1:exon
so has part: feature:149563-149709:1:exon
so has part: feature:149815-149882:1:exon
so has part: feature:161182-161239:1:exon
so has part: feature:162024-162047:1:exon
so has part: feature:162138-162248:1:exon
so has part: feature:162362-162412:1:exon
so has part: feature:171421-171564:1:exon
so has part: feature:171636-171731:1:exon
so has part: feature:171816-171887:1:exon
so has part: feature:173050-173468:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:148022-148231:1:exon

position:148231:1
position: 148231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:149563-149709:1:exon

position:149563:1
position: 149563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149709:1
position: 149709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:149815-149882:1:exon

position:149815:1
position: 149815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149882:1
position: 149882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:161182-161239:1:exon

position:161182:1
position: 161182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161239:1
position: 161239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:162024-162047:1:exon

position:162024:1
position: 162024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162047:1
position: 162047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:162138-162248:1:exon

position:162138:1
position: 162138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162248:1
position: 162248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:162362-162412:1:exon

position:162362:1
position: 162362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162412:1
position: 162412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:171421-171564:1:exon

position:171421:1
position: 171421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171564:1
position: 171564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:171636-171731:1:exon

position:171636:1
position: 171636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171731:1
position: 171731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:171816-171887:1:exon

position:171816:1
position: 171816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171887:1
position: 171887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:173050-173468:1:exon

position:173050:1
position: 173050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244720
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244720
product: phytochrome-associated serine/threonine-protein phosphatase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 long SRA reads, 60 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_041142914.1
SIO_010081: LOC121244720
subclass of: SO_0000673
so part of: LOC121244720
location: join(148023..148231,149563..149709,149815..149882,161182..161239,162138..162248,162362..162412,171421..171564,171636..171731,171816..171887,173050..173468)
location: region:148023-173468:1
so has part: feature:148023-148231:1:exon
so has part: feature:149563-149709:1:exon
so has part: feature:149815-149882:1:exon
so has part: feature:161182-161239:1:exon
so has part: feature:162138-162248:1:exon
so has part: feature:162362-162412:1:exon
so has part: feature:171421-171564:1:exon
so has part: feature:171636-171731:1:exon
so has part: feature:171816-171887:1:exon
so has part: feature:173050-173468:1:exon

position:148023:1
position: 148023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148023-148231:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:149563-149709:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:149815-149882:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:161182-161239:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:162138-162248:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:162362-162412:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:171421-171564:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:171636-171731:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:171816-171887:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:173050-173468:1:exon

LOC121244720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244720
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phytochrome-associated serine/threonine-protein phosphatase isoform X1
translation: MDLDQWISKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQEGHLTFARVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFSDNMEREVKFFTETEENNQMRGPRTGVPYFL
SIO_010081: LOC121244720
subclass of: SO_0000673
so part of: LOC121244720
location: join(148151..148231,149563..149709,149815..149882,161182..161239,162024..162047,162138..162248,162362..162412,171421..171564,171636..171731,171816..171887,173050..173133)
location: region:148151-173133:1
so has part: feature:148151-148231:1:exon
so has part: feature:149563-149709:1:exon
so has part: feature:149815-149882:1:exon
so has part: feature:161182-161239:1:exon
so has part: feature:162024-162047:1:exon
so has part: feature:162138-162248:1:exon
so has part: feature:162362-162412:1:exon
so has part: feature:171421-171564:1:exon
so has part: feature:171636-171731:1:exon
so has part: feature:171816-171887:1:exon
so has part: feature:173050-173133:1:exon

XP_040998847.1
type: Protein
SIO_000068: ncbiprotein

position:148151:1
position: 148151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173133:1
position: 173133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148151-148231:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:149563-149709:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:149815-149882:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:161182-161239:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:162024-162047:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:162138-162248:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:162362-162412:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:171421-171564:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:171636-171731:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:171816-171887:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:173050-173133:1:exon

LOC121244720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244720
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phytochrome-associated serine/threonine-protein phosphatase isoform X2
translation: MDLDQWISKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFSDNMEREVKFFTETEENNQMRGPRTGVPYFL
SIO_010081: LOC121244720
subclass of: SO_0000673
so part of: LOC121244720
location: join(148151..148231,149563..149709,149815..149882,161182..161239,162138..162248,162362..162412,171421..171564,171636..171731,171816..171887,173050..173133)
location: region:148151-173133:1
so has part: feature:148151-148231:1:exon
so has part: feature:149563-149709:1:exon
so has part: feature:149815-149882:1:exon
so has part: feature:161182-161239:1:exon
so has part: feature:162138-162248:1:exon
so has part: feature:162362-162412:1:exon
so has part: feature:171421-171564:1:exon
so has part: feature:171636-171731:1:exon
so has part: feature:171816-171887:1:exon
so has part: feature:173050-173133:1:exon

XP_040998848.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148151-148231:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:149563-149709:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:149815-149882:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:161182-161239:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:162138-162248:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:162362-162412:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:171421-171564:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:171636-171731:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:171816-171887:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:173050-173133:1:exon

LOC121244722
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244722
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 174890..177601
location: region:174890-177601:1
so has part: feature:174890-177601:1:exon
subclass of: SO_0000011

121244722
type: Gene
SIO_000068: ncbigene

position:174890:1
position: 174890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177601:1
position: 177601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174890-177601:1:exon

LOC121244722
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2249226
nc RNA class: lncRNA
gene: LOC121244722
product: uncharacterized LOC121244722, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XR_005936486.1
SIO_010081: LOC121244722
subclass of: SO_0000673
so part of: LOC121244722
location: join(174890..174919,176601..176647,176725..177601)
location: region:174890-177601:1
so has part: feature:174890-174919:1:exon
so has part: feature:176601-176647:1:exon
so has part: feature:176725-177601:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:174890-174919:1:exon

position:174919:1
position: 174919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:176601-176647:1:exon

position:176601:1
position: 176601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176647:1
position: 176647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:176725-177601:1:exon

position:176725:1
position: 176725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244722
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2249226
nc RNA class: lncRNA
gene: LOC121244722
product: uncharacterized LOC121244722, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 102 samples with support for all annotated introns
transcript id: XR_005936485.1
SIO_010081: LOC121244722
subclass of: SO_0000673
so part of: LOC121244722
location: join(174890..174919,176606..176647,176725..177601)
location: region:174890-177601:1
so has part: feature:174890-174919:1:exon
so has part: feature:176606-176647:1:exon
so has part: feature:176725-177601:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:174890-174919:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:176606-176647:1:exon

position:176606:1
position: 176606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:176725-177601:1:exon

LOC121244721
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244721
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 179127..186766
location: region:179127-186766:1
so has part: feature:179127-186766:1:exon
subclass of: SO_0000010

121244721
type: Gene
SIO_000068: ncbigene

position:179127:1
position: 179127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186766:1
position: 186766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179127-186766:1:exon

LOC121244721
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244721
product: phytochrome-associated serine/threonine-protein phosphatase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 15 long SRA reads, 64 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_041142915.1
SIO_010081: LOC121244721
subclass of: SO_0000673
so part of: LOC121244721
location: join(179127..179349,180588..180734,180840..180907,182975..183032,184416..184526,184646..184696,185259..185402,185475..185570,185655..185726,186349..186766)
location: region:179127-186766:1
so has part: feature:179127-179349:1:exon
so has part: feature:180588-180734:1:exon
so has part: feature:180840-180907:1:exon
so has part: feature:182975-183032:1:exon
so has part: feature:184416-184526:1:exon
so has part: feature:184646-184696:1:exon
so has part: feature:185259-185402:1:exon
so has part: feature:185475-185570:1:exon
so has part: feature:185655-185726:1:exon
so has part: feature:186349-186766:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179127-179349:1:exon

position:179349:1
position: 179349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:180588-180734:1:exon

position:180588:1
position: 180588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180734:1
position: 180734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:180840-180907:1:exon

position:180840:1
position: 180840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180907:1
position: 180907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:182975-183032:1:exon

position:182975:1
position: 182975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183032:1
position: 183032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:184416-184526:1:exon

position:184416:1
position: 184416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184526:1
position: 184526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:184646-184696:1:exon

position:184646:1
position: 184646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184696:1
position: 184696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:185259-185402:1:exon

position:185259:1
position: 185259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185402:1
position: 185402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:185475-185570:1:exon

position:185475:1
position: 185475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185570:1
position: 185570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:185655-185726:1:exon

position:185655:1
position: 185655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185726:1
position: 185726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:186349-186766:1:exon

position:186349:1
position: 186349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244721
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244721
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phytochrome-associated serine/threonine-protein phosphatase-like
translation: MDLDQWISKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNRINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFSDNMEREVKFFTETEENNQMRGPRTGVPYFL
SIO_010081: LOC121244721
subclass of: SO_0000673
so part of: LOC121244721
location: join(179269..179349,180588..180734,180840..180907,182975..183032,184416..184526,184646..184696,185259..185402,185475..185570,185655..185726,186349..186432)
location: region:179269-186432:1
so has part: feature:179269-179349:1:exon
so has part: feature:180588-180734:1:exon
so has part: feature:180840-180907:1:exon
so has part: feature:182975-183032:1:exon
so has part: feature:184416-184526:1:exon
so has part: feature:184646-184696:1:exon
so has part: feature:185259-185402:1:exon
so has part: feature:185475-185570:1:exon
so has part: feature:185655-185726:1:exon
so has part: feature:186349-186432:1:exon

XP_040998849.1
type: Protein
SIO_000068: ncbiprotein

position:179269:1
position: 179269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186432:1
position: 186432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179269-179349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:180588-180734:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:180840-180907:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:182975-183032:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:184416-184526:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:184646-184696:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:185259-185402:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185475-185570:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:185655-185726:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:186349-186432:1:exon

LOC121244748
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244748
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 187892..189270
location: region:187892-189270:1
so has part: feature:187892-189270:1:exon
subclass of: SO_0000010

121244748
type: Gene
SIO_000068: ncbigene

position:187892:1
position: 187892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189270:1
position: 189270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187892-189270:1:exon

LOC121244748
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244748
product: probable leucine-rich repeat receptor-like protein kinase At1g35710
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041142954.1
SIO_010081: LOC121244748
subclass of: SO_0000673
so part of: LOC121244748
location: join(187892..187976,188069..189270)
location: region:187892-189270:1
so has part: feature:187892-187976:1:exon
so has part: feature:188069-189270:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:187892-187976:1:exon

position:187976:1
position: 187976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:188069-189270:1:exon

position:188069:1
position: 188069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244748
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244748
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: probable leucine-rich repeat receptor-like protein kinase At1g35710
translation: MTLNKSILDLNSTLQDPIIHAVQIKIKDSTLNNFHSLPSLDLSFNLLSGPIPASIGQVRNLTYVDLSNNQLSGQLPISLFNLANLLDLSLTNNQLTGYIPDQIGELKSLTSFSLNANLFTGHIPVIISRLHNLWHLNLSRNALSGPLPETLGMGIPSLLSIDLSYNNLSLGEVPDWIRSRQLSDVRLAGCKLRGTLPRFTKPDSLSSIELSDNFFMVGLSSFLAKFSNLQKVKLSNNQLRSDLSEIRLPGGPYLHSNQLTGSISRILNNKTSSFLEVIDASSNHITGSIPELKEGLNLKVLNVASNRISSHLPSSISNLTKLETFDVSRNQINGAIPTGLGLLLKLQWLDLSINGLSGRIPNSLLGIESLRNANFRANSLDCGEIPXRPYNIFPAAAYSHNLCLCGKPLPPCRTMKQVSNEI
SIO_010081: LOC121244748
subclass of: SO_0000673
so part of: LOC121244748
location: join(187892..187976,188069..189251)
location: region:187892-189251:1
so has part: feature:187892-187976:1:exon
so has part: feature:188069-189251:1:exon

XP_040998888.1
type: Protein
SIO_000068: ncbiprotein

position:189251:1
position: 189251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187892-187976:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188069-189251:1:exon

LOC121243854
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121243854
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(189514..191381)
location: region:189514-191381:-1
so has part: feature:189514-191381:-1:exon
subclass of: SO_0000010

121243854
type: Gene
SIO_000068: ncbigene

position:189514:-1
position: 189514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191381:-1
position: 191381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189514-191381:-1:exon

LOC121243854
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121243854
product: high mobility group B protein 7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_041141920.1
SIO_010081: LOC121243854
subclass of: SO_0000673
so part of: LOC121243854
location: complement(join(189514..189781,189878..189964,190052..190096,190182..190239,190437..190553,190636..190687,190810..190892,191125..191381))
location: region:189514-191381:-1
so has part: feature:191125-191381:-1:exon
so has part: feature:190810-190892:-1:exon
so has part: feature:190636-190687:-1:exon
so has part: feature:190437-190553:-1:exon
so has part: feature:190182-190239:-1:exon
so has part: feature:190052-190096:-1:exon
so has part: feature:189878-189964:-1:exon
so has part: feature:189514-189781:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:191125-191381:-1:exon

position:191125:-1
position: 191125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:190810-190892:-1:exon

position:190810:-1
position: 190810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190892:-1
position: 190892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:190636-190687:-1:exon

position:190636:-1
position: 190636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190687:-1
position: 190687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:190437-190553:-1:exon

position:190437:-1
position: 190437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190553:-1
position: 190553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:190182-190239:-1:exon

position:190182:-1
position: 190182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190239:-1
position: 190239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:190052-190096:-1:exon

position:190052:-1
position: 190052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190096:-1
position: 190096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:189878-189964:-1:exon

position:189878:-1
position: 189878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189964:-1
position: 189964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:189514-189781:-1:exon

position:189781:-1
position: 189781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121243854
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121243854
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high mobility group B protein 7-like
translation: MATTGGVKGRKRVEASSEPQTAASLLRAKDGSAFARCEECNKNVPVALISMHSCSLEAKIKLNLEAQLVEMSTESKKKPADRKKLGTTGPKAKKAKTEKKVKKGKDPSMPKRPPTAFFLFMDDFRKAYKEAHPDSKDVKVVAKEGGEKWRNLTEEEKKVYQDKASDLKMEYAKALESHNAEDEDGDRGSEKEVEGASDGE
SIO_010081: LOC121243854
subclass of: SO_0000673
so part of: LOC121243854
location: complement(join(189731..189781,189878..189964,190052..190096,190182..190239,190437..190553,190636..190687,190810..190892,191125..191234))
location: region:189731-191234:-1
so has part: feature:191125-191234:-1:exon
so has part: feature:190810-190892:-1:exon
so has part: feature:190636-190687:-1:exon
so has part: feature:190437-190553:-1:exon
so has part: feature:190182-190239:-1:exon
so has part: feature:190052-190096:-1:exon
so has part: feature:189878-189964:-1:exon
so has part: feature:189731-189781:-1:exon

XP_040997854.1
type: Protein
SIO_000068: ncbiprotein

position:189731:-1
position: 189731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191234:-1
position: 191234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191125-191234:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:190810-190892:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:190636-190687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:190437-190553:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:190182-190239:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:190052-190096:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:189878-189964:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:189731-189781:-1:exon

LOC121244751
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244751
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 204368..205495
location: region:204368-205495:1
so has part: feature:204368-205495:1:exon
subclass of: SO_0000010

121244751
type: Gene
SIO_000068: ncbigene

position:204368:1
position: 204368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205495:1
position: 205495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204368-205495:1:exon

LOC121244751
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244751
product: uncharacterized LOC121244751
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_041142958.1
SIO_010081: LOC121244751
subclass of: SO_0000673
so part of: LOC121244751
location: join(204368..204912,205126..205495)
location: region:204368-205495:1
so has part: feature:204368-204912:1:exon
so has part: feature:205126-205495:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:204368-204912:1:exon

position:204912:1
position: 204912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:205126-205495:1:exon

position:205126:1
position: 205126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244751
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244751
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:205244..205246,aa:OTHER)
transl except: (pos:205250..205252,aa:OTHER)
product: LOW QUALITY PROTEIN: uncharacterized protein LOC121244751
translation: MTRTFFCKLLTCLYSEDELDVVLNDEADGQSSRHRTNRQRCKFIRRDHIQGHEHLFRDYFTENAVYPSNLFRRRFRMSRPLFLRILNEKESYEPYFVQIRDSAGRLGLSSMQKITASLRMLVYGVTRDFMDEYICIGESTAMESLKKFSGTIVRVFSESYLRSPNANDIARLLVVGEQQGLPAQGRALPVNYTINGNDYTMGYYFADGIYPKWLTFVKTISXLXGNKKKNFMKAQESPRKDVERAFGVLQQRFAIICRPSRMFKVKELTNIMKTCVILHNMIIEDEGDDSEGPNIDYDQLDDES
SIO_010081: LOC121244751
subclass of: SO_0000673
so part of: LOC121244751
location: join(204368..204912,205126..205495)
location: region:204368-205495:1
so has part: feature:204368-204912:1:exon
so has part: feature:205126-205495:1:exon

XP_040998892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204368-204912:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205126-205495:1:exon

LOC121244752
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 209163..245267
location: region:209163-245267:1
so has part: feature:209163-245267:1:exon
subclass of: SO_0000010

121244752
type: Gene
SIO_000068: ncbigene

position:209163:1
position: 209163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245267:1
position: 245267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209163-245267:1:exon

LOC121244752
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244752
product: helicase-like transcription factor CHR28
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041142959.1
SIO_010081: LOC121244752
subclass of: SO_0000673
so part of: LOC121244752
location: join(209163..209219,214543..214585,214767..214883,214965..215155,215234..215599,222178..222249,222321..222398,222495..223395,234892..235021,240452..240673,241676..242244,242601..242810,244062..245267)
location: region:209163-245267:1
so has part: feature:209163-209219:1:exon
so has part: feature:214543-214585:1:exon
so has part: feature:214767-214883:1:exon
so has part: feature:214965-215155:1:exon
so has part: feature:215234-215599:1:exon
so has part: feature:222178-222249:1:exon
so has part: feature:222321-222398:1:exon
so has part: feature:222495-223395:1:exon
so has part: feature:234892-235021:1:exon
so has part: feature:240452-240673:1:exon
so has part: feature:241676-242244:1:exon
so has part: feature:242601-242810:1:exon
so has part: feature:244062-245267:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:209163-209219:1:exon

position:209219:1
position: 209219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:214543-214585:1:exon

position:214543:1
position: 214543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214585:1
position: 214585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:214767-214883:1:exon

position:214767:1
position: 214767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214883:1
position: 214883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:214965-215155:1:exon

position:214965:1
position: 214965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215155:1
position: 215155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:215234-215599:1:exon

position:215234:1
position: 215234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215599:1
position: 215599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:222178-222249:1:exon

position:222178:1
position: 222178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222249:1
position: 222249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:222321-222398:1:exon

position:222321:1
position: 222321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222398:1
position: 222398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:222495-223395:1:exon

position:222495:1
position: 222495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223395:1
position: 223395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:234892-235021:1:exon

position:234892:1
position: 234892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235021:1
position: 235021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:240452-240673:1:exon

position:240452:1
position: 240452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240673:1
position: 240673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:241676-242244:1:exon

position:241676:1
position: 241676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242244:1
position: 242244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:242601-242810:1:exon

position:242601:1
position: 242601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242810:1
position: 242810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:244062-245267:1:exon

position:244062:1
position: 244062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244752
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244752
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: helicase-like transcription factor CHR28
translation: MEGLWNVMGIYSGSLYTDPVLGFAANLKTLPRADISSSDEDLESWETDGRGSTASRALPLWASTQGTNSRATGYSVQSQNVNSPKGASASNGKSSNANNYSRDKLHFHPGSSDSTGGPNHQSAQLDDSEYFTNNGNALKRTLPPSLQPITPSTRLRNLSENMGGSHVHDTYESSYHSAGPSATKSKGYLRDQFSRGKNDEVAVYENSGTRMLPPSLMHGKAISSSQFVSSSDASYRPMVGEERQTENDERLIYQAALEDLNQPKFEATLPDGLLSISLLRHQKIALAWMLQKETRSLHCMGGILADDQGLGKTISMIALIQMQKSLQSKPTSEDLCNRKTEALNLDDDDDNGSGGVVEVKNSEESDGLKPIPEVSTSTQSFRRQRPAAGTLVVCPASVLRQWARELDEKVADEAKLSVLLYHGGSRTKDPVALAKYDVVLTTYAIVTNEVPKQPLVEEDDADEKNEVYGLSAEFSTDKKRKKTTNVTKRGKKGRKGMDSSIDCGCGPLARVGWFRVILDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNAIDDLYSYFRFLKYDPYAVYKSFYNTIKLPISRNSLHGYKKLQAVLRAIMLRRTKGSLIDGXPIIKLPPKTVHLTKVNFSTEERAFYTKLEADSRSQFKAYAAAGTVNQNYANILLMLLRLRQACDHPFLVKDYKSDSVGKDSLEMAKKLPRDMLINLLNCLETSFAICQVCNDPPEDPVVTMCGHAFCYQCVSEYLTGDDNTCPASACKEQLGSDVVFSKATLSSCLSDNVDGSPMNSQFTESSLVLQNEYSSSKIRAVLEILQTHCKMNCSMECNGSSLSEEKAHAENFHSSVSAVKHTTVYSKAPAEGAIKAIVFSQWTSMLDLVEISLNQFCIQYRRLDGTMTLGAXDRAVRDFNTDPEVTVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRITIKDTVEDRILALQEEKRKMVASAFGEDQSGGFATRLTVEDLKYLFMV
SIO_010081: LOC121244752
subclass of: SO_0000673
so part of: LOC121244752
location: join(209163..209219,214543..214585,214767..214883,214965..215155,215234..215599,222178..222249,222321..222398,222495..223395,234892..235021,240452..240673,241676..242244,242601..242810,244062..244166)
location: region:209163-244166:1
so has part: feature:209163-209219:1:exon
so has part: feature:214543-214585:1:exon
so has part: feature:214767-214883:1:exon
so has part: feature:214965-215155:1:exon
so has part: feature:215234-215599:1:exon
so has part: feature:222178-222249:1:exon
so has part: feature:222321-222398:1:exon
so has part: feature:222495-223395:1:exon
so has part: feature:234892-235021:1:exon
so has part: feature:240452-240673:1:exon
so has part: feature:241676-242244:1:exon
so has part: feature:242601-242810:1:exon
so has part: feature:244062-244166:1:exon

XP_040998893.1
type: Protein
SIO_000068: ncbiprotein

position:244166:1
position: 244166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209163-209219:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214543-214585:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214767-214883:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214965-215155:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215234-215599:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:222178-222249:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:222321-222398:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:222495-223395:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:234892-235021:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:240452-240673:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:241676-242244:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:242601-242810:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:244062-244166:1:exon

LOC121243913
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121243913
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(246863..248742)
location: region:246863-248742:-1
so has part: feature:246863-248742:-1:exon
subclass of: SO_0000010

121243913
type: Gene
SIO_000068: ncbigene

position:246863:-1
position: 246863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248742:-1
position: 248742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246863-248742:-1:exon

LOC121243913
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121243913
product: protein ASPARTIC PROTEASE IN GUARD CELL 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041141972.1
SIO_010081: LOC121243913
subclass of: SO_0000673
so part of: LOC121243913
location: complement(246863..248742)
location: region:246863-248742:-1
so has part: feature:246863-248742:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:246863-248742:-1:exon

LOC121243913
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121243913
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ASPARTIC PROTEASE IN GUARD CELL 2-like
translation: MDQSSPALLLVVVVVLLFLHLHLPTGIASTAFTSTPASSANHGNTIPDDHHSDNSQHLNVKEIMADTKVISQPQELLETHHETSDGKWKLKLLHRDKITAASLHHNFHDRFRELMKRDVSRFTSLIRRLTINGTSSTSDDPYHHEVLEENFGSDVVSGMDQGSGEYFVRIGVGSPPTSQYMVIDSGSDIAWVQCQPCNQCYRQSDPVFDPADSASFAGVSCSSAVCDRLEKAGCHGGRCRYEVSYGDGSYTKGTLALETLTFGRTVIRNVAIGCGHTNQGMFVGAAGLLGLGGGSMSFVGQLGGEAGGAFSYCLVSRGTETSGSLEFGRGAMPMGAAWVPLIRNPRAPSFYYVGLSGLGVGGMRVPIPEEMFRLTELGYGGVVMDTGTAVTRLPTMAYEAFREAYIDQTRNLPRATGVPIFDTCYDLSGFVSVRVPTVSFYFSGGPILTLPAKNILIPVNEGGTFCFAFAPSSSGLSIIGNIQQEGIQITFDGANGFVGFGPDVC
SIO_010081: LOC121243913
subclass of: SO_0000673
so part of: LOC121243913
location: complement(247026..248543)
location: region:247026-248543:-1
so has part: feature:247026-248543:-1:exon

XP_040997906.1
type: Protein
SIO_000068: ncbiprotein

position:247026:-1
position: 247026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248543:-1
position: 248543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247026-248543:-1:exon

LOC121244007
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244007
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 258596..262739
location: region:258596-262739:1
so has part: feature:258596-262739:1:exon
subclass of: SO_0000010

121244007
type: Gene
SIO_000068: ncbigene

position:258596:1
position: 258596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262739:1
position: 262739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258596-262739:1:exon

LOC121244007
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244007
product: splicing factor 3B subunit 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 3 long SRA reads, 79 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041142056.1
SIO_010081: LOC121244007
subclass of: SO_0000673
so part of: LOC121244007
location: 258596..262739
location: region:258596-262739:1
so has part: feature:258596-262739:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:258596-262739:1:exon

LOC121244007
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244007
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing factor 3B subunit 1-like
translation: MDPDIAKTQEERKRLEQQLASITSLTFDTDLYGVNDRDSYVTSIPVTDDDENLDSIDNEVARKLASYTAPKSLLKEMPRGAGAEDDNDDAFGGFKKPQRIIDREDDYRKRRLNRVISPERHDAFAAGEKTPDPSVRTYADVMREEALKREKEETLKRIAKKKEEEESAAKSDKATEDKGPKRRNRWDQSQDDGAAAAKKPKTTSDWDLPEDATPGRWDATPTPGRLGDATPSASVGRRNRWDETPTPGRLADATPAGGVTPGATPAGMTWDATPKISGLATPTPKRQRSRWDETPATMGSATPMAGATPAAAASFTPGITPVGGVELATPTPGAINLRGAITPEQYNLLRWEKDIEERNRPLTDEELDAMFPQEGYKILEPPASYVPIRTPARKLLATPTPLGTPLYSIPEENRGQQFDVPKEAPGGLPFMKPEDYQYFGALLNEDDEEELSPDEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKARELGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLLDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYASYYTKEVMVILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFKNFWVRRMALDRRNYRQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALIHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPVLEDEQNNVYSRPELMMFV
SIO_010081: LOC121244007
subclass of: SO_0000673
so part of: LOC121244007
location: 258747..262556
location: region:258747-262556:1
so has part: feature:258747-262556:1:exon

XP_040997990.1
type: Protein
SIO_000068: ncbiprotein

position:258747:1
position: 258747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262556:1
position: 262556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258747-262556:1:exon

LOC121244838
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244838
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 274065..292185
location: region:274065-292185:1
so has part: feature:274065-292185:1:exon
subclass of: SO_0000010

121244838
type: Gene
SIO_000068: ncbigene

position:274065:1
position: 274065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292185:1
position: 292185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274065-292185:1:exon

LOC121244838
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244838
product: uncharacterized LOC121244838
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_041143053.1
SIO_010081: LOC121244838
subclass of: SO_0000673
so part of: LOC121244838
location: join(274065..274069,291508..292185)
location: region:274065-292185:1
so has part: feature:274065-274069:1:exon
so has part: feature:291508-292185:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:274065-274069:1:exon

position:274069:1
position: 274069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:291508-292185:1:exon

position:291508:1
position: 291508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244834
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244834
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 286800..290967
location: region:286800-290967:1
so has part: feature:286800-290967:1:exon
subclass of: SO_0000010

121244834
type: Gene
SIO_000068: ncbigene

position:286800:1
position: 286800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290967:1
position: 290967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286800-290967:1:exon

LOC121244834
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244834
product: splicing factor 3B subunit 1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 75 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041143049.1
SIO_010081: LOC121244834
subclass of: SO_0000673
so part of: LOC121244834
location: 286800..290967
location: region:286800-290967:1
so has part: feature:286800-290967:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:286800-290967:1:exon

LOC121244834
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244834
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: splicing factor 3B subunit 1-like
translation: MDPDIAKTQEERKRLEQQLASITSLTFDTDLYGGNDRDSYVTSIPVTDDDENLDSIDNEVARKLASYTAPKSLLKEMPRGAGAEDDRRRIWGFKKPQRIIDREDDYRKRRLNRVISPERHDAFAAGEKTPDPSVRTYADVMREEALKREKEETLKRIAKKKEEEESAPKSDKATEDKGPKRRNRWDQSQDDGAAAAKKPKTTSDWDLPEDATPGRWDATPTPGRLGDATPSASVGRRNRWDETPTPGRLADATPAGGVTPGATPAGMTWDATPKISGLATPTPKRQRSRWXETPATMGSATPMAGATPAAAASFTPGITPVGGVELATPTPGAINLRGAITPEQYNLLRWEKDIEERNRPLTDEELDAMFPQEGYKILEPPASYVPIRTPARKLLATPTPLGTPLYSIPEENRGQQFDVPKEAPGGLPFMKPEDYQYFGALLNEDEEEELSPDEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKARELGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLLDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYASYYTKEVMVILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFKNFWVRRMALDRRNYRQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVXGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALIHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPVMEDEQNNVYSRPELMMFV
SIO_010081: LOC121244834
subclass of: SO_0000673
so part of: LOC121244834
location: 286986..290792
location: region:286986-290792:1
so has part: feature:286986-290792:1:exon

XP_040998983.1
type: Protein
SIO_000068: ncbiprotein

position:286986:1
position: 286986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290792:1
position: 290792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286986-290792:1:exon

LOC121244838
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244838
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121244838
translation: MEPNRRKKTEKSKWTAINNEEEKKVEELLQAAQDELLLKLSLDSHMSRVPPDYLHTDLDRRFQSLKSRPSLPISPSQSQKLTPSSVASAGAEDEELKAALGDELSTRFAALKGSLFSSSSSSSTNVISVGPISSSDDDEEDEVEKLIRWAKDAARLDPSPPSDEDDEEEEDNHQHEKVHQRK
SIO_010081: LOC121244838
subclass of: SO_0000673
so part of: LOC121244838
location: 291522..292070
location: region:291522-292070:1
so has part: feature:291522-292070:1:exon

XP_040998987.1
type: Protein
SIO_000068: ncbiprotein

position:291522:1
position: 291522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292070:1
position: 292070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291522-292070:1:exon

LOC121244753
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244753
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(293693..301470)
location: region:293693-301470:-1
so has part: feature:293693-301470:-1:exon

121244753
type: Gene
SIO_000068: ncbigene

position:293693:-1
position: 293693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301470:-1
position: 301470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293693-301470:-1:exon

LOC121244753
type: Exon
subclass of: SO_0000147
RO_0002162: 2249226
gene: LOC121244753
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121244753
subclass of: SO_0000673
so part of: LOC121244753
location: complement(293693..294206)
location: region:293693-294206:-1
so has part: feature:293693-294206:-1:exon

position:294206:-1
position: 294206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293693-294206:-1:exon

LOC121244753
type: Exon
subclass of: SO_0000147
RO_0002162: 2249226
gene: LOC121244753
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121244753
subclass of: SO_0000673
so part of: LOC121244753
location: complement(294293..294466)
location: region:294293-294466:-1
so has part: feature:294293-294466:-1:exon

position:294293:-1
position: 294293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294466:-1
position: 294466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294293-294466:-1:exon

LOC121244753
type: Exon
subclass of: SO_0000147
RO_0002162: 2249226
gene: LOC121244753
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121244753
subclass of: SO_0000673
so part of: LOC121244753
location: complement(295918..295983)
location: region:295918-295983:-1
so has part: feature:295918-295983:-1:exon

position:295918:-1
position: 295918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295983:-1
position: 295983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295918-295983:-1:exon

LOC121244753
type: Exon
subclass of: SO_0000147
RO_0002162: 2249226
gene: LOC121244753
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121244753
subclass of: SO_0000673
so part of: LOC121244753
location: complement(296090..296207)
location: region:296090-296207:-1
so has part: feature:296090-296207:-1:exon

position:296090:-1
position: 296090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296207:-1
position: 296207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296090-296207:-1:exon

LOC121244836
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244836
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 301021..305931
location: region:301021-305931:1
so has part: feature:301021-305931:1:exon
subclass of: SO_0000010

121244836
type: Gene
SIO_000068: ncbigene

position:301021:1
position: 301021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305931:1
position: 305931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301021-305931:1:exon

LOC121244836
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244836
product: transcription factor SRM1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_041143051.1
SIO_010081: LOC121244836
subclass of: SO_0000673
so part of: LOC121244836
location: join(301021..302193,305194..305931)
location: region:301021-305931:1
so has part: feature:301021-302193:1:exon
so has part: feature:305194-305931:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:301021-302193:1:exon

position:302193:1
position: 302193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:305194-305931:1:exon

position:305194:1
position: 305194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244753
type: Exon
subclass of: SO_0000147
RO_0002162: 2249226
gene: LOC121244753
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121244753
subclass of: SO_0000673
so part of: LOC121244753
location: complement(301369..301470)
location: region:301369-301470:-1
so has part: feature:301369-301470:-1:exon

position:301369:-1
position: 301369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301369-301470:-1:exon

LOC121244836
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244836
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor SRM1-like
translation: MTVDEAGISSLWSRDQDKAFEIALATHPEDAPDRWEKIAADVPGKTVEEIKHHYELLVYDINLIESGRVPLPSYNSSLEGSTSYTCDEGTGKKGGHLGHHNNESNNGNKASRSDQERRKGLAWTEDEHRLFLLGLEKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVGDGDISAPQGPITGQTNGGSAGVSSSKSTKPQLQPQAGPASVGMYGGPTIGQPIGGSLVSAVGTPVNLPTGPHMAYGVRAPVPGVIVPGAPMNMGPMGYPMPPTSAAHR
SIO_010081: LOC121244836
subclass of: SO_0000673
so part of: LOC121244836
location: join(301808..302193,305194..305701)
location: region:301808-305701:1
so has part: feature:301808-302193:1:exon
so has part: feature:305194-305701:1:exon

XP_040998985.1
type: Protein
SIO_000068: ncbiprotein

position:301808:1
position: 301808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305701:1
position: 305701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301808-302193:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:305194-305701:1:exon

LOC121244837
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244837
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 306325..308469
location: region:306325-308469:1
so has part: feature:306325-308469:1:exon
subclass of: SO_0000010

121244837
type: Gene
SIO_000068: ncbigene

position:306325:1
position: 306325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308469:1
position: 308469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306325-308469:1:exon

LOC121244837
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244837
product: GEM-like protein 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 18 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041143052.1
SIO_010081: LOC121244837
subclass of: SO_0000673
so part of: LOC121244837
location: join(306325..306544,307109..307300,307411..307491,307725..307999,308123..308469)
location: region:306325-308469:1
so has part: feature:306325-306544:1:exon
so has part: feature:307109-307300:1:exon
so has part: feature:307411-307491:1:exon
so has part: feature:307725-307999:1:exon
so has part: feature:308123-308469:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:306325-306544:1:exon

position:306544:1
position: 306544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:307109-307300:1:exon

position:307109:1
position: 307109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307300:1
position: 307300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:307411-307491:1:exon

position:307411:1
position: 307411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307491:1
position: 307491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:307725-307999:1:exon

position:307725:1
position: 307725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307999:1
position: 307999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:308123-308469:1:exon

position:308123:1
position: 308123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244837
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244837
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GEM-like protein 4
translation: MGRMKSNAKAHPAEIPAKGYSPQQGKIDSVLKRMNKLKKKAKNFAHGVLEHVRLGHKFTETVRWKLRLGAKILQVGGFEKVFKELFSVSEGEKLLKAFQCFLSTTAGPVAGLLFISTKKVSFCSERSIKVSSPNGEMVRFHYKVLIPLKKIMRVDLSENVRKPSAKYIEVTTWDNFDFWFMGFLNYQKSYKYLELAVSQAGEN
SIO_010081: LOC121244837
subclass of: SO_0000673
so part of: LOC121244837
location: join(307228..307300,307411..307491,307725..307999,308123..308305)
location: region:307228-308305:1
so has part: feature:307228-307300:1:exon
so has part: feature:307411-307491:1:exon
so has part: feature:307725-307999:1:exon
so has part: feature:308123-308305:1:exon

XP_040998986.1
type: Protein
SIO_000068: ncbiprotein

position:307228:1
position: 307228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308305:1
position: 308305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307228-307300:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:307411-307491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:307725-307999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:308123-308305:1:exon

LOC121244837
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2249226
gene: LOC121244837
product: GEM-like protein 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XR_005936496.1
SIO_010081: LOC121244837
so part of: LOC121244837
location: join(307647..307792,307987..307999,308123..308231)
location: region:307647-308231:1
so has part: feature:307647-307792:1:exon
so has part: feature:307987-307999:1:exon
so has part: feature:308123-308231:1:exon

position:307647:1
position: 307647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308231:1
position: 308231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307647-307792:1:exon

position:307792:1
position: 307792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:307987-307999:1:exon

position:307987:1
position: 307987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:308123-308231:1:exon

LOC121244835
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244835
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(309766..313239)
location: region:309766-313239:-1
so has part: feature:309766-313239:-1:exon
subclass of: SO_0000010

121244835
type: Gene
SIO_000068: ncbigene

position:309766:-1
position: 309766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313239:-1
position: 313239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309766-313239:-1:exon

LOC121244835
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244835
product: piriformospora indica-insensitive protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_041143050.1
SIO_010081: LOC121244835
subclass of: SO_0000673
so part of: LOC121244835
location: complement(join(309766..311041,311996..313239))
location: region:309766-313239:-1
so has part: feature:311996-313239:-1:exon
so has part: feature:309766-311041:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:311996-313239:-1:exon

position:311996:-1
position: 311996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:309766-311041:-1:exon

position:311041:-1
position: 311041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121244835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244835
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: piriformospora indica-insensitive protein 2-like
translation: MKSITTISIVTFAVFVFCLAVWCCGEEDMDVAPMEKTEKEALYFAIQGFVGNWWNGSALYPDPCGWTPIQGVSCDLVEGLWYITALNIGPVHDNSLGCATKLEFRPQLFELKYLKTLSFFNCFVSSHRHPISIPSNNWKKLAGSLESLDFRSNPGLIGQFPASFGFLRKLQSLVLIESGLTGKLPTNIGNLINLKRLVLAGNRFNGPIPYSFGRLSQLLIFDLSRNTLSGPLPSSLGGLTSLLKLDLSNNQLEGMLPGEISNLKNLTLLDLRNNNFSGGLSKSLEEMRSLEELVLSNNPIGGVFTCLEWHKLHNLVVLDLSNVGLKGEIPESILKLKRLRFLGLSDNHLMGKLPAKLSTLPCVTALYLNGNNLTGEINFSEGFLGKMGRRFGAWNNPNLCYPVGLKSPSHVPYGIKLCQKEFTVHESNPRTK
SIO_010081: LOC121244835
subclass of: SO_0000673
so part of: LOC121244835
location: complement(join(309953..311041,311996..312205))
location: region:309953-312205:-1
so has part: feature:311996-312205:-1:exon
so has part: feature:309953-311041:-1:exon

XP_040998984.1
type: Protein
SIO_000068: ncbiprotein

position:309953:-1
position: 309953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312205:-1
position: 312205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311996-312205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309953-311041:-1:exon

LOC121244511
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244511
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 328402..333902
location: region:328402-333902:1
so has part: feature:328402-333902:1:exon
subclass of: SO_0000010

121244511
type: Gene
SIO_000068: ncbigene

position:328402:1
position: 328402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333902:1
position: 333902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328402-333902:1:exon

LOC121244511
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244511
product: protein decapping 5-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 103 samples with support for all annotated introns
transcript id: XM_041142606.1
SIO_010081: LOC121244511
subclass of: SO_0000673
so part of: LOC121244511
location: join(328402..328729,330201..330301,330688..330759,330856..331800,332617..332682,333113..333307,333418..333531,333608..333902)
location: region:328402-333902:1
so has part: feature:328402-328729:1:exon
so has part: feature:330201-330301:1:exon
so has part: feature:330688-330759:1:exon
so has part: feature:330856-331800:1:exon
so has part: feature:332617-332682:1:exon
so has part: feature:333113-333307:1:exon
so has part: feature:333418-333531:1:exon
so has part: feature:333608-333902:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:328402-328729:1:exon

position:328729:1
position: 328729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:330201-330301:1:exon

position:330201:1
position: 330201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330301:1
position: 330301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:330688-330759:1:exon

position:330688:1
position: 330688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330759:1
position: 330759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:330856-331800:1:exon

position:330856:1
position: 330856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331800:1
position: 331800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:332617-332682:1:exon

position:332617:1
position: 332617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332682:1
position: 332682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:333113-333307:1:exon

position:333113:1
position: 333113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333307:1
position: 333307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:333418-333531:1:exon

position:333418:1
position: 333418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333531:1
position: 333531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:333608-333902:1:exon

position:333608:1
position: 333608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244511
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244511
product: protein decapping 5-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 28 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_041142608.1
SIO_010081: LOC121244511
subclass of: SO_0000673
so part of: LOC121244511
location: join(328402..328729,330201..330301,330688..330759,330856..331800,332617..332682,333113..333307,333421..333531,333608..333902)
location: region:328402-333902:1
so has part: feature:328402-328729:1:exon
so has part: feature:330201-330301:1:exon
so has part: feature:330688-330759:1:exon
so has part: feature:330856-331800:1:exon
so has part: feature:332617-332682:1:exon
so has part: feature:333113-333307:1:exon
so has part: feature:333421-333531:1:exon
so has part: feature:333608-333902:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:328402-328729:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:330201-330301:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:330688-330759:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:330856-331800:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:332617-332682:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:333113-333307:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:333421-333531:1:exon

position:333421:1
position: 333421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:333608-333902:1:exon

LOC121244511
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244511
product: protein decapping 5-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 97 samples with support for all annotated introns
transcript id: XM_041142609.1
SIO_010081: LOC121244511
subclass of: SO_0000673
so part of: LOC121244511
location: join(328402..328729,330201..330301,330688..330759,330856..331800,333113..333307,333418..333531,333608..333902)
location: region:328402-333902:1
so has part: feature:328402-328729:1:exon
so has part: feature:330201-330301:1:exon
so has part: feature:330688-330759:1:exon
so has part: feature:330856-331800:1:exon
so has part: feature:333113-333307:1:exon
so has part: feature:333418-333531:1:exon
so has part: feature:333608-333902:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:328402-328729:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:330201-330301:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:330688-330759:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:330856-331800:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:333113-333307:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:333418-333531:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:333608-333902:1:exon

LOC121244511
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244511
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein decapping 5-like isoform X1
translation: MASESASRSSTTSADSYIGSLISLTSKSEIRYEGVLYNINTQESSIGLENVRSFGTEGRKKDGPQVPPGDKIYKYILFRGSDIKDLQVKSSPPVQPMPPINIDPAIIQSHYARPISTSTSLPPAVSGSLTDISSHSAQLGPHGSSFQGGLPLYQPGGNIASWGATPPPSSANGGGLAMPMYWQGYYGPPNGLPHLHQQSLLRPPPGLPMPSSLQLPVQYPNFNVSLPSGSSNLPEVPSPLPPASSSSMNLSSSSLAPSTLPSTLPPVPSVTLASETLVNSVPSKAPPSSGLPTITLGSSMPSLAPLAMSSPDINAILPPISNKPSAIPGPILSYQASSRSTSSIVGTSNTIHAEAPAPSLVTPGQLLQSVPSAVASSQTLQTVHKDAEVDQVSSSSSESIVPVPAEGQPPLLPLPVPSRTSQKPNGTPFQYRQGYRGRDRGGGSGSSRPVTKFSEDFDFIAMNEKFKKDEVWGHLGKSNKSHSREGDGEVSDEDDTLDDEDAELSKFEVKQSVYNKDDFFDSLSCNSLNHESQNGRSRFSEQMKIDTETFGDFTRYRGGRGGRGSGRGGRFRGGYYGRGYNHVGRGRGPGIFGRSP
SIO_010081: LOC121244511
subclass of: SO_0000673
so part of: LOC121244511
location: join(328579..328729,330201..330301,330688..330759,330856..331800,332617..332682,333113..333307,333418..333531,333608..333754)
location: region:328579-333754:1
so has part: feature:328579-328729:1:exon
so has part: feature:330201-330301:1:exon
so has part: feature:330688-330759:1:exon
so has part: feature:330856-331800:1:exon
so has part: feature:332617-332682:1:exon
so has part: feature:333113-333307:1:exon
so has part: feature:333418-333531:1:exon
so has part: feature:333608-333754:1:exon

XP_040998540.1
type: Protein
SIO_000068: ncbiprotein

position:328579:1
position: 328579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333754:1
position: 333754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328579-328729:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:330201-330301:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:330688-330759:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:330856-331800:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:332617-332682:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:333113-333307:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:333418-333531:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:333608-333754:1:exon

LOC121244511
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244511
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein decapping 5-like isoform X2
translation: MASESASRSSTTSADSYIGSLISLTSKSEIRYEGVLYNINTQESSIGLENVRSFGTEGRKKDGPQVPPGDKIYKYILFRGSDIKDLQVKSSPPVQPMPPINIDPAIIQSHYARPISTSTSLPPAVSGSLTDISSHSAQLGPHGSSFQGGLPLYQPGGNIASWGATPPPSSANGGGLAMPMYWQGYYGPPNGLPHLHQQSLLRPPPGLPMPSSLQLPVQYPNFNVSLPSGSSNLPEVPSPLPPASSSSMNLSSSSLAPSTLPSTLPPVPSVTLASETLVNSVPSKAPPSSGLPTITLGSSMPSLAPLAMSSPDINAILPPISNKPSAIPGPILSYQASSRSTSSIVGTSNTIHAEAPAPSLVTPGQLLQSVPSAVASSQTLQTVHKDAEVDQVSSSSSESIVPVPAEGQPPLLPLPVPSRTSQKPNGTPFQYRQGYRGRDRGGGSGSSRPVTKFSEDFDFIAMNEKFKKDEVWGHLGKSNKSHSREGDGEVSDEDDTLDDEDAELSKFEVKSVYNKDDFFDSLSCNSLNHESQNGRSRFSEQMKIDTETFGDFTRYRGGRGGRGSGRGGRFRGGYYGRGYNHVGRGRGPGIFGRSP
SIO_010081: LOC121244511
subclass of: SO_0000673
so part of: LOC121244511
location: join(328579..328729,330201..330301,330688..330759,330856..331800,332617..332682,333113..333307,333421..333531,333608..333754)
location: region:328579-333754:1
so has part: feature:328579-328729:1:exon
so has part: feature:330201-330301:1:exon
so has part: feature:330688-330759:1:exon
so has part: feature:330856-331800:1:exon
so has part: feature:332617-332682:1:exon
so has part: feature:333113-333307:1:exon
so has part: feature:333421-333531:1:exon
so has part: feature:333608-333754:1:exon

XP_040998542.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328579-328729:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:330201-330301:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:330688-330759:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:330856-331800:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:332617-332682:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:333113-333307:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:333421-333531:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:333608-333754:1:exon

LOC121244511
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244511
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein decapping 5-like isoform X3
translation: MASESASRSSTTSADSYIGSLISLTSKSEIRYEGVLYNINTQESSIGLENVRSFGTEGRKKDGPQVPPGDKIYKYILFRGSDIKDLQVKSSPPVQPMPPINIDPAIIQSHYARPISTSTSLPPAVSGSLTDISSHSAQLGPHGSSFQGGLPLYQPGGNIASWGATPPPSSANGGGLAMPMYWQGYYGPPNGLPHLHQQSLLRPPPGLPMPSSLQLPVQYPNFNVSLPSGSSNLPEVPSPLPPASSSSMNLSSSSLAPSTLPSTLPPVPSVTLASETLVNSVPSKAPPSSGLPTITLGSSMPSLAPLAMSSPDINAILPPISNKPSAIPGPILSYQASSRSTSSIVGTSNTIHAEAPAPSLVTPGQLLQSVPSAVASSQTLQTVHKDAEVDQVSSSSSESIVPVPAEGQPPLLPLPVPSRTSQKSSRPVTKFSEDFDFIAMNEKFKKDEVWGHLGKSNKSHSREGDGEVSDEDDTLDDEDAELSKFEVKQSVYNKDDFFDSLSCNSLNHESQNGRSRFSEQMKIDTETFGDFTRYRGGRGGRGSGRGGRFRGGYYGRGYNHVGRGRGPGIFGRSP
SIO_010081: LOC121244511
subclass of: SO_0000673
so part of: LOC121244511
location: join(328579..328729,330201..330301,330688..330759,330856..331800,333113..333307,333418..333531,333608..333754)
location: region:328579-333754:1
so has part: feature:328579-328729:1:exon
so has part: feature:330201-330301:1:exon
so has part: feature:330688-330759:1:exon
so has part: feature:330856-331800:1:exon
so has part: feature:333113-333307:1:exon
so has part: feature:333418-333531:1:exon
so has part: feature:333608-333754:1:exon

XP_040998543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328579-328729:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:330201-330301:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:330688-330759:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:330856-331800:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:333113-333307:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:333418-333531:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:333608-333754:1:exon

LOC121244036
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244036
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 337428..343398
location: region:337428-343398:1
so has part: feature:337428-343398:1:exon
subclass of: SO_0000010

121244036
type: Gene
SIO_000068: ncbigene

position:337428:1
position: 337428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343398:1
position: 343398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337428-343398:1:exon

LOC121244036
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244036
product: protein CHUP1, chloroplastic-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_041142081.1
SIO_010081: LOC121244036
subclass of: SO_0000673
so part of: LOC121244036
location: join(337428..338149,338385..338476,338570..339322,339919..341280,341391..341522,341842..342023,342266..342377,342562..342705,343184..343398)
location: region:337428-343398:1
so has part: feature:337428-338149:1:exon
so has part: feature:338385-338476:1:exon
so has part: feature:338570-339322:1:exon
so has part: feature:339919-341280:1:exon
so has part: feature:341391-341522:1:exon
so has part: feature:341842-342023:1:exon
so has part: feature:342266-342377:1:exon
so has part: feature:342562-342705:1:exon
so has part: feature:343184-343398:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:337428-338149:1:exon

position:338149:1
position: 338149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:338385-338476:1:exon

position:338385:1
position: 338385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338476:1
position: 338476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:338570-339322:1:exon

position:338570:1
position: 338570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339322:1
position: 339322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:339919-341280:1:exon

position:339919:1
position: 339919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341280:1
position: 341280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:341391-341522:1:exon

position:341391:1
position: 341391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341522:1
position: 341522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:341842-342023:1:exon

position:341842:1
position: 341842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342023:1
position: 342023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:342266-342377:1:exon

position:342266:1
position: 342266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342377:1
position: 342377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:342562-342705:1:exon

position:342562:1
position: 342562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342705:1
position: 342705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:343184-343398:1:exon

position:343184:1
position: 343184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244036
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244036
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CHUP1, chloroplastic-like
translation: MISRLSLLVAASIAAFAVRQLNVKTSRSSTSEVRLPENGEANFEPHQCEERGEEQDVHSYDRLKEKDGKEEEEEEEVKLISSVFNRIQGNPIDIYDEEILPEFEDLLSGEIEFPFPGKTINDAEIDRVYEIEMANNASELERLRKLVNELEEREVKLEGELLEYYGLKEQESDILELQRQLKIKTVEIDMLNITINSLQTERKKLQEEIAQGTSAKKELEVARNKIKELQKQIQLEANQTKGQLLLLKQQVSGLQAKEVDAVKKDSEIEKKLKAVEELEIEVVELKRKNKELQHEKRELTVKLDAAEARISVLSNMTESERVAKAREEVNNLRHANEDLLKQVEGLQMNRFSEVEELVYLRWVNACLRYELRNHQAPVGKTSARDLNKSLSPKSQEKAKQLMLEYAGSERGQGDTDLESNLSHPSSPGSEDFDSISIDSSSSRYSSLLKKPTLIQKLKKWGKSKDDSSALSPTSRSLSGGSPSRRPRGPLESLMLRNAGDSMAITTFGRMELEPNSPEPLTLPGIRTRVSSSDSLNTVATSFHLMSKSVEGVVDEKYPAYKDRHKLALEREKQIKERAGQARAEKFGDKSNLNLRDPTSKVEGQRPINLPPKLAKIKEKVVVSGDSGNQTNDDKTDSQTISKMKLADIEKRSPRVPRPPPKPSGVSSAGKNPNPPGGIPTAPLPPPGAPPPPPPPPPGGPPRPPPPPGSLPRGGGSGDKVHRAPELVEFYQSLMKREAKKDTPSLFSSTPNASDARSNMIGEIENRSSFLLAVKADVETQGDFVMSLATEVRAASFTNIEDLLAFVNWLDEELSFLVDERAVLKHFDWPEGKADALREAAFEYQDLMKLEKRVSAFVDDPKLPCEDALKKMYSLLEKVETSVYALLRTRDMAISRYREFGIPVDWLLDSGVVGKIKLSSVQLARKYMKRVASELDALSGPEKEPNREFLVLQGVRFAFRVHQFAGGFDAESMKAFEELRSRIHTQVGEDNKQDT
SIO_010081: LOC121244036
subclass of: SO_0000673
so part of: LOC121244036
location: join(338041..338149,338385..338476,338570..339322,339919..341280,341391..341522,341842..342023,342266..342377,342562..342705,343184..343282)
location: region:338041-343282:1
so has part: feature:338041-338149:1:exon
so has part: feature:338385-338476:1:exon
so has part: feature:338570-339322:1:exon
so has part: feature:339919-341280:1:exon
so has part: feature:341391-341522:1:exon
so has part: feature:341842-342023:1:exon
so has part: feature:342266-342377:1:exon
so has part: feature:342562-342705:1:exon
so has part: feature:343184-343282:1:exon

XP_040998015.1
type: Protein
SIO_000068: ncbiprotein

position:338041:1
position: 338041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343282:1
position: 343282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338041-338149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:338385-338476:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:338570-339322:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:339919-341280:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:341391-341522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:341842-342023:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:342266-342377:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:342562-342705:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:343184-343282:1:exon

LOC121244037
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244037
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(343327..346990)
location: region:343327-346990:-1
so has part: feature:343327-346990:-1:exon
subclass of: SO_0000010

121244037
type: Gene
SIO_000068: ncbigene

position:343327:-1
position: 343327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346990:-1
position: 346990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343327-346990:-1:exon

LOC121244037
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244037
product: uncharacterized protein At1g26090, chloroplastic, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_041142083.1
SIO_010081: LOC121244037
subclass of: SO_0000673
so part of: LOC121244037
location: complement(join(343327..344283,344674..345090,345195..345366,345467..345660,346673..346990))
location: region:343327-346990:-1
so has part: feature:346673-346990:-1:exon
so has part: feature:345467-345660:-1:exon
so has part: feature:345195-345366:-1:exon
so has part: feature:344674-345090:-1:exon
so has part: feature:343327-344283:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:346673-346990:-1:exon

position:346673:-1
position: 346673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:345467-345660:-1:exon

position:345467:-1
position: 345467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345660:-1
position: 345660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:345195-345366:-1:exon

position:345195:-1
position: 345195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345366:-1
position: 345366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:344674-345090:-1:exon

position:344674:-1
position: 344674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345090:-1
position: 345090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:343327-344283:-1:exon

position:344283:-1
position: 344283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121244037
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244037
product: uncharacterized protein At1g26090, chloroplastic, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_041142082.1
SIO_010081: LOC121244037
subclass of: SO_0000673
so part of: LOC121244037
location: complement(join(343327..344283,344674..345090,345195..345366,345467..345660,345767..345841,345932..346075,346673..346989))
location: region:343327-346989:-1
so has part: feature:346673-346989:-1:exon
so has part: feature:345932-346075:-1:exon
so has part: feature:345767-345841:-1:exon
so has part: feature:345467-345660:-1:exon
so has part: feature:345195-345366:-1:exon
so has part: feature:344674-345090:-1:exon
so has part: feature:343327-344283:-1:exon

position:346989:-1
position: 346989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346673-346989:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:345932-346075:-1:exon

position:345932:-1
position: 345932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346075:-1
position: 346075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:345767-345841:-1:exon

position:345767:-1
position: 345767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345841:-1
position: 345841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:345467-345660:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:345195-345366:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:344674-345090:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:343327-344283:-1:exon

LOC121244037
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244037
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein At1g26090, chloroplastic isoform X2
translation: MASFLSFPLLLANPTSHSTLGRRDFALPVSLTDDGGNNSSQQSTKLVTFLGKGGSGKTTSAVFAAQIVGEELGVLPGMDTIFSVFALGRLVGLLSNVAQENHRKEKFDVIIYDGISTEETLRIIGATSKARLYLKYLRNLAEKTDLGRVAGPSLVRLVDEALSISGSRSYLNGKMSAEVWDTLEQMLERGSSIFSEPHKFGCFLVMHPNSPISVNSALRYWGCTVQAGAQVSGAFGIDSPNLNEELVEQVKRTFSPLPFAFTPQFQVDSPLDWNEVMLKTVCKDARNLLSLPPSHTSDMSSVKFDPAKKSVTLLMPGFDKSEIKLYQYRGGSELLVEAGDQRRVILLPPDIQGKVGGAKFMNRSLVITMR
SIO_010081: LOC121244037
subclass of: SO_0000673
so part of: LOC121244037
location: complement(join(344152..344283,344674..345090,345195..345366,345467..345660,346673..346870))
location: region:344152-346870:-1
so has part: feature:346673-346870:-1:exon
so has part: feature:345467-345660:-1:exon
so has part: feature:345195-345366:-1:exon
so has part: feature:344674-345090:-1:exon
so has part: feature:344152-344283:-1:exon

XP_040998017.1
type: Protein
SIO_000068: ncbiprotein

position:344152:-1
position: 344152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346870:-1
position: 346870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346673-346870:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:345467-345660:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:345195-345366:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:344674-345090:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:344152-344283:-1:exon

LOC121244037
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244037
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein At1g26090, chloroplastic isoform X1
translation: MASFLSFPLLLANPTSHSTLGRRDFALPVSLTDDGGNNSSQQSTKLVTFLGKGGSGKTTSAVFAAQHYALAGLSTCLVIHNQDPSADYLLNCKIGTSPVICNNNLSAVRLETSKILLEPLNWLKRADARLNMTQGVLEGIVGEELGVLPGMDTIFSVFALGRLVGLLSNVAQENHRKEKFDVIIYDGISTEETLRIIGATSKARLYLKYLRNLAEKTDLGRVAGPSLVRLVDEALSISGSRSYLNGKMSAEVWDTLEQMLERGSSIFSEPHKFGCFLVMHPNSPISVNSALRYWGCTVQAGAQVSGAFGIDSPNLNEELVEQVKRTFSPLPFAFTPQFQVDSPLDWNEVMLKTVCKDARNLLSLPPSHTSDMSSVKFDPAKKSVTLLMPGFDKSEIKLYQYRGGSELLVEAGDQRRVILLPPDIQGKVGGAKFMNRSLVITMR
SIO_010081: LOC121244037
subclass of: SO_0000673
so part of: LOC121244037
location: complement(join(344152..344283,344674..345090,345195..345366,345467..345660,345767..345841,345932..346075,346673..346870))
location: region:344152-346870:-1
so has part: feature:346673-346870:-1:exon
so has part: feature:345932-346075:-1:exon
so has part: feature:345767-345841:-1:exon
so has part: feature:345467-345660:-1:exon
so has part: feature:345195-345366:-1:exon
so has part: feature:344674-345090:-1:exon
so has part: feature:344152-344283:-1:exon

XP_040998016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:346673-346870:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:345932-346075:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:345767-345841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:345467-345660:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:345195-345366:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:344674-345090:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:344152-344283:-1:exon

LOC121244973
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244973
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 367487..370470
location: region:367487-370470:1
so has part: feature:367487-370470:1:exon
subclass of: SO_0000010

121244973
type: Gene
SIO_000068: ncbigene

position:367487:1
position: 367487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370470:1
position: 370470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367487-370470:1:exon

LOC121244973
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244973
product: coiled-coil domain-containing protein 130-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 98 samples with support for all annotated introns
transcript id: XM_041143230.1
SIO_010081: LOC121244973
subclass of: SO_0000673
so part of: LOC121244973
location: join(367487..367585,368426..368488,368575..368654,369062..369170,369438..369587,369865..370470)
location: region:367487-370470:1
so has part: feature:367487-367585:1:exon
so has part: feature:368426-368488:1:exon
so has part: feature:368575-368654:1:exon
so has part: feature:369062-369170:1:exon
so has part: feature:369438-369587:1:exon
so has part: feature:369865-370470:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:367487-367585:1:exon

position:367585:1
position: 367585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:368426-368488:1:exon

position:368426:1
position: 368426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368488:1
position: 368488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:368575-368654:1:exon

position:368575:1
position: 368575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368654:1
position: 368654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:369062-369170:1:exon

position:369062:1
position: 369062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369170:1
position: 369170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:369438-369587:1:exon

position:369438:1
position: 369438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369587:1
position: 369587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:369865-370470:1:exon

position:369865:1
position: 369865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244973
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244973
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: coiled-coil domain-containing protein 130-like
translation: MSSLAAARADKFYYPPEWTPSQCSLNKFHGQHALRERARKIDEGILIISFEMPFNVWCGGCNSMIAKGVRLNANKKQVGNYYSTKIWSSTMKSACTCRHEIVIQTDPKNCXYVIISGAQRKTEEFAVTFALPADEERGKLSDPFYCLEHQEEDLQKKKEAEPVLVRLQRVSDARHSDDYALNKALRAQLRVCY
SIO_010081: LOC121244973
subclass of: SO_0000673
so part of: LOC121244973
location: join(367583..367585,368426..368488,368575..368654,369062..369170,369438..369587,369865..370040)
location: region:367583-370040:1
so has part: feature:367583-367585:1:exon
so has part: feature:368426-368488:1:exon
so has part: feature:368575-368654:1:exon
so has part: feature:369062-369170:1:exon
so has part: feature:369438-369587:1:exon
so has part: feature:369865-370040:1:exon

XP_040999164.1
type: Protein
SIO_000068: ncbiprotein

position:367583:1
position: 367583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370040:1
position: 370040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367583-367585:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:368426-368488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:368575-368654:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:369062-369170:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369438-369587:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:369865-370040:1:exon

LOC121243946
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121243946
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(373040..375334)
location: region:373040-375334:-1
so has part: feature:373040-375334:-1:exon
subclass of: SO_0000010

121243946
type: Gene
SIO_000068: ncbigene

position:373040:-1
position: 373040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375334:-1
position: 375334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373040-375334:-1:exon

LOC121243946
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121243946
product: transcription factor TCP12-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041142005.1
SIO_010081: LOC121243946
subclass of: SO_0000673
so part of: LOC121243946
location: complement(373040..375334)
location: region:373040-375334:-1
so has part: feature:373040-375334:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:373040-375334:-1:exon

LOC121243946
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121243946
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor TCP12-like
translation: MFPRSSSDQSPFIYTSPSILEKPFANDEKTSSGQDQEHPSSYSHLSAPFFEDDELFFSHFLSQQKLFVCSNSQVVTENSVAAKDKAADKRKEACSNTVAEQIPSKRKFPNKKSIGGAKPTGPRKRTGKKDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFSKSRTAITELTESISHVKQTCSDGAKSVSVTSDSEVVSENVEIGSDGDQRGFCADVESFNRMATERTNRKLHIVARDSRNQARARARERTRKKMMIRGHEVSTEISVGPNPNSNLVQLCSSSPLETGDQESYIPSQHMKSSLKMVAEVEERCSHLLGHQIDSVCISENFLGIVNGAPTSSNLVLNDSRNDLAALSGGDTEEDFPGFPVNLSSNSNNNANMQSFCCTTSTNTKSSTGNVQLRIPCAMGTSKSHELKHTSIFMTTYNTQEQMLNSIFRSTPNIQDQNRSSIFFTSLNTQRQNPSTSFLATSTNNCLQSHFLGNEFS
SIO_010081: LOC121243946
subclass of: SO_0000673
so part of: LOC121243946
location: complement(373280..374782)
location: region:373280-374782:-1
so has part: feature:373280-374782:-1:exon

XP_040997939.1
type: Protein
SIO_000068: ncbiprotein

position:373280:-1
position: 373280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374782:-1
position: 374782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373280-374782:-1:exon

LOC121243848
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121243848
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 406093..408738
location: region:406093-408738:1
so has part: feature:406093-408738:1:exon
subclass of: SO_0000010

121243848
type: Gene
SIO_000068: ncbigene

position:406093:1
position: 406093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408738:1
position: 408738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406093-408738:1:exon

LOC121243848
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121243848
product: transcription factor bHLH30-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_041141915.1
SIO_010081: LOC121243848
subclass of: SO_0000673
so part of: LOC121243848
location: join(406093..406356,406486..407177,408114..408738)
location: region:406093-408738:1
so has part: feature:406093-406356:1:exon
so has part: feature:406486-407177:1:exon
so has part: feature:408114-408738:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:406093-406356:1:exon

position:406356:1
position: 406356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:406486-407177:1:exon

position:406486:1
position: 406486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407177:1
position: 407177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:408114-408738:1:exon

position:408114:1
position: 408114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121243848
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121243848
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: transcription factor bHLH30-like
translation: MCGKKEDDRGECSQTVDNINMIQSFQEQLFLQQQQQIMLQHQQQNSDIYGGGRGLIFPQVSPILQPWPLPPVHAFSPAGHFATNPVRDHDPLNIVPPTPSSFXGLFNRRPPPDHLQFAYDDHGPSSDHLRIISDTLGPVVQPGSAPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTSLIAETNPVPTEVDELTVDTSDEDGKFVIKASLSCEDRSDLLPDLIKTLKSLRLRTLKAEITTLGGRVKNVLLVSGDEDSISSSTSGEKQQQQQQHSISSIEEALKAVMEKTAGDESSSGSVKRQRTTNINILEHS
SIO_010081: LOC121243848
subclass of: SO_0000673
so part of: LOC121243848
location: join(406579..407177,408114..408587)
location: region:406579-408587:1
so has part: feature:406579-407177:1:exon
so has part: feature:408114-408587:1:exon

XP_040997849.1
type: Protein
SIO_000068: ncbiprotein

position:406579:1
position: 406579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408587:1
position: 408587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406579-407177:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:408114-408587:1:exon

LOC121243968
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121243968
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 411406..414999
location: region:411406-414999:1
so has part: feature:411406-414999:1:exon
subclass of: SO_0000011

121243968
type: Gene
SIO_000068: ncbigene

position:411406:1
position: 411406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414999:1
position: 414999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411406-414999:1:exon

LOC121243968
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2249226
nc RNA class: lncRNA
gene: LOC121243968
product: uncharacterized LOC121243968
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XR_005936351.1
SIO_010081: LOC121243968
subclass of: SO_0000673
so part of: LOC121243968
location: join(411406..411733,412973..413183,414640..414999)
location: region:411406-414999:1
so has part: feature:411406-411733:1:exon
so has part: feature:412973-413183:1:exon
so has part: feature:414640-414999:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:411406-411733:1:exon

position:411733:1
position: 411733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:412973-413183:1:exon

position:412973:1
position: 412973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413183:1
position: 413183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:414640-414999:1:exon

position:414640:1
position: 414640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244972
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244972
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(417059..420338)
location: region:417059-420338:-1
so has part: feature:417059-420338:-1:exon
subclass of: SO_0000010

121244972
type: Gene
SIO_000068: ncbigene

position:417059:-1
position: 417059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420338:-1
position: 420338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417059-420338:-1:exon

LOC121244972
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244972
product: leucoanthocyanidin reductase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 long SRA reads, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XM_041143229.1
SIO_010081: LOC121244972
subclass of: SO_0000673
so part of: LOC121244972
location: complement(join(417059..417573,417679..417882,419223..419460,419651..419791,419925..420338))
location: region:417059-420338:-1
so has part: feature:419925-420338:-1:exon
so has part: feature:419651-419791:-1:exon
so has part: feature:419223-419460:-1:exon
so has part: feature:417679-417882:-1:exon
so has part: feature:417059-417573:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:419925-420338:-1:exon

position:419925:-1
position: 419925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:419651-419791:-1:exon

position:419651:-1
position: 419651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419791:-1
position: 419791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:419223-419460:-1:exon

position:419223:-1
position: 419223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419460:-1
position: 419460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:417679-417882:-1:exon

position:417679:-1
position: 417679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417882:-1
position: 417882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:417059-417573:-1:exon

position:417573:-1
position: 417573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121244972
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244972
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucoanthocyanidin reductase-like
translation: MTMTRLPSSVSTTKLAKVGRLLIVGAAGFIGQFVAEASLDAGLPTYVLVRPGLCFPSSKTHTIKSLQDKGAIILHGLINEKESIEKILKENEIDIVISAVGGGNILDQLCLIEAIKSVGTVKRFLPSEFGHDVDRAEPVEPGLTMYKAKQRVRRLVEESNVPYTYICCNSIASWPYYDNTHPSEVLPPLDRFQIYGDGSVKAFFVAGTDIGKFTMKTVDDIRTLNKCVHFRPTSNFYNINQLASLWEKKIGKTLPRVTVTESDLLAAAAENCIPQSIVASFTHDIFIKGCQINFTIDSPQDVEVNTLYPDETFRTLDECFNDFLLKVDPKSMSNNETPTAKSPMVEPMTITATCA
SIO_010081: LOC121244972
subclass of: SO_0000673
so part of: LOC121244972
location: complement(join(417314..417573,417679..417882,419223..419460,419651..419791,419925..420149))
location: region:417314-420149:-1
so has part: feature:419925-420149:-1:exon
so has part: feature:419651-419791:-1:exon
so has part: feature:419223-419460:-1:exon
so has part: feature:417679-417882:-1:exon
so has part: feature:417314-417573:-1:exon

XP_040999163.1
type: Protein
SIO_000068: ncbiprotein

position:417314:-1
position: 417314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420149:-1
position: 420149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419925-420149:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419651-419791:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419223-419460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:417679-417882:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:417314-417573:-1:exon

LOC121244360
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244360
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(422018..430958)
location: region:422018-430958:-1
so has part: feature:422018-430958:-1:exon
subclass of: SO_0000010

121244360
type: Gene
SIO_000068: ncbigene

position:422018:-1
position: 422018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430958:-1
position: 430958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422018-430958:-1:exon

LOC121244360
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244360
product: transcriptional repressor ILP1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 106 samples with support for all annotated introns
transcript id: XM_041142405.1
SIO_010081: LOC121244360
subclass of: SO_0000673
so part of: LOC121244360
location: complement(join(422018..422714,423843..424132,424296..424578,424801..425471,427975..428142,429700..430958))
location: region:422018-430958:-1
so has part: feature:429700-430958:-1:exon
so has part: feature:427975-428142:-1:exon
so has part: feature:424801-425471:-1:exon
so has part: feature:424296-424578:-1:exon
so has part: feature:423843-424132:-1:exon
so has part: feature:422018-422714:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:429700-430958:-1:exon

position:429700:-1
position: 429700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:427975-428142:-1:exon

position:427975:-1
position: 427975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428142:-1
position: 428142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:424801-425471:-1:exon

position:424801:-1
position: 424801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425471:-1
position: 425471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:424296-424578:-1:exon

position:424296:-1
position: 424296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424578:-1
position: 424578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:423843-424132:-1:exon

position:423843:-1
position: 423843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424132:-1
position: 424132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:422018-422714:-1:exon

position:422714:-1
position: 422714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121244360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244360
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional repressor ILP1
translation: MSSSRPKNFRRRAGDDDEDGQKDDANVPNITTTKAASKPKPKKLLSFVDDEDAETPSRSSSSSSSSFKRSSKPSSSSHKITSLRDRQAHSTPSVSVSNVQPQAGTYTKEALLELQKNTRTLVSSRSTSSEPSIVLKGLLKPPSSDDPEISRTLRQSDDDRDVSDGDEDNRDRRDAQTRFASLGIGKTRDSPGSALFPDQATINAIRAKRERLRKSRAAAPDFISLDGGSNHGEAEGLSDEEPEFRGRIAMFGEKQKIDDSETMKKGVFEDDDEVVHERAVGVNLVKDSASENAVEEEDEEEKMWEEEQFRKGLGKRMDDGATRVAVTASVPVVQSLQQQQQHKSVYPATVPSAVGGMSIGGAIGDLDTMLSIPQQAEVAKKALLENLRRLKESHGRTVISLTKTDDDLSASLSNITALEKSLSAANEKFIFMQKLRHFVSVICDFLQDKAPYIEELEEQMQKLHEERTSTILERRAADNDDEHMEVEAAVNAAMSVFSQRGSSAEIIAAATSAAQAASAAVREQTNLPVKLDEFGRDINLQKRMDMSRRAERRKAKSDSKSISSMEVENSNQRIEGELSSDESDSESTAYQHHRKLLLQTADQIFSDAAEEYSRLSAVKERFEKWKRDYSSSYRDAYMSLSVPAIFSPYVRLELLKWDPLHEDIDFFDMKWHSLLFDYGLLNEKSDFASDDADSNLVPELVEKVALPILHHEIAHCWDMLSTRETKNAVNATSLVTNYVPASSEALSDLLVAIHTCLADAVANLTVPTWSPLVLKAVPNAARVAAYRFGKSVRLLRNICMWKEILALPVLEKLALDELLYGKMLPHVRSIATNVHDAITRTERIIVSLSGVWAGPNVTGERSQKLKPLVDYVLFLGKTLEKKHVMGVNESETSGLARRLKKMLVELNEYDYARDIARTFHLKEAL
SIO_010081: LOC121244360
subclass of: SO_0000673
so part of: LOC121244360
location: complement(join(422522..422714,423843..424132,424296..424578,424801..425471,427975..428142,429700..430872))
location: region:422522-430872:-1
so has part: feature:429700-430872:-1:exon
so has part: feature:427975-428142:-1:exon
so has part: feature:424801-425471:-1:exon
so has part: feature:424296-424578:-1:exon
so has part: feature:423843-424132:-1:exon
so has part: feature:422522-422714:-1:exon

XP_040998339.1
type: Protein
SIO_000068: ncbiprotein

position:422522:-1
position: 422522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430872:-1
position: 430872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429700-430872:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:427975-428142:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:424801-425471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:424296-424578:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:423843-424132:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422522-422714:-1:exon

LOC121244854
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244854
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 444881..446387
location: region:444881-446387:1
so has part: feature:444881-446387:1:exon
subclass of: SO_0000010

121244854
type: Gene
SIO_000068: ncbigene

position:444881:1
position: 444881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446387:1
position: 446387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444881-446387:1:exon

LOC121244854
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244854
product: AP2/ERF and B3 domain-containing transcription repressor RAV2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041143076.1
SIO_010081: LOC121244854
subclass of: SO_0000673
so part of: LOC121244854
location: 444881..446387
location: region:444881-446387:1
so has part: feature:444881-446387:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:444881-446387:1:exon

LOC121244854
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244854
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP2/ERF and B3 domain-containing transcription repressor RAV2-like
translation: MEGSCIDEISSSTSTEYSISISPTTLSPSLATKSPESLCRVGSGTTSTILDSESGIEAESRGKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAAKAYDIAAQRFRGRDAVTNFKSLASASTTEDQDHDIETAFLNSHSKAEIVDMLRKHTYNDELEQSKRNLGLDGNGGNRSKAEGFLCNPFGSGRAFKAREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLHTGSTTKGVLLNFEDVGGKVWRFRYSYWNSSQSYVLTKGWSRFVKDKNLKAGDIVSFQRSTGPDKQLYIDWKGRTGSGAGVVVGLSNPVFPVQPVQMVRLFGVNILQVPVVGVVESTIIGGYHGKRTRERDLLALECSKKQRMLGAL
SIO_010081: LOC121244854
subclass of: SO_0000673
so part of: LOC121244854
location: 445044..446183
location: region:445044-446183:1
so has part: feature:445044-446183:1:exon

XP_040999010.1
type: Protein
SIO_000068: ncbiprotein

position:445044:1
position: 445044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446183:1
position: 446183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445044-446183:1:exon

LOC121244892
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 448786..455320
location: region:448786-455320:1
so has part: feature:448786-455320:1:exon
subclass of: SO_0000010

121244892
type: Gene
SIO_000068: ncbigene

position:448786:1
position: 448786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455320:1
position: 455320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448786-455320:1:exon

LOC121244892
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244892
product: methionine aminopeptidase 1B, chloroplastic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 long SRA reads, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_041143129.1
SIO_010081: LOC121244892
subclass of: SO_0000673
so part of: LOC121244892
location: join(448786..448980,449322..449403,449689..449926,450728..450889,450964..451005,451742..451813,452005..452084,453280..453377,454130..454177,455063..455320)
location: region:448786-455320:1
so has part: feature:448786-448980:1:exon
so has part: feature:449322-449403:1:exon
so has part: feature:449689-449926:1:exon
so has part: feature:450728-450889:1:exon
so has part: feature:450964-451005:1:exon
so has part: feature:451742-451813:1:exon
so has part: feature:452005-452084:1:exon
so has part: feature:453280-453377:1:exon
so has part: feature:454130-454177:1:exon
so has part: feature:455063-455320:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:448786-448980:1:exon

position:448980:1
position: 448980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:449322-449403:1:exon

position:449322:1
position: 449322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449403:1
position: 449403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:449689-449926:1:exon

position:449689:1
position: 449689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449926:1
position: 449926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:450728-450889:1:exon

position:450728:1
position: 450728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450889:1
position: 450889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:450964-451005:1:exon

position:450964:1
position: 450964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451005:1
position: 451005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:451742-451813:1:exon

position:451742:1
position: 451742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451813:1
position: 451813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:452005-452084:1:exon

position:452005:1
position: 452005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452084:1
position: 452084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:453280-453377:1:exon

position:453280:1
position: 453280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453377:1
position: 453377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:454130-454177:1:exon

position:454130:1
position: 454130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454177:1
position: 454177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:455063-455320:1:exon

position:455063:1
position: 455063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244892
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methionine aminopeptidase 1B, chloroplastic
translation: MALASAARLAHSPSLQLSARFHGEALSSSSKSTLFMGAPLTFSGSAFPGKQFHSRKQLVVFSKKFSGLQEAMRIKRERELKSVKKVTRRPPLRRGKVSPRLLVPDHIPKPPYAGSNLLPEISSEYQSHDSEGIVRMRAACELAARVLDNAGKLVRPSVTTNEIDKAVHQMIIDAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGDVSDAMKHLVKVTEECLERGIAVCKDGASFKKIGKRISEHAEKYGYGVVERFVGHGVGSIFHSEPLIYHHRNDQPGHMVEGQTFTIEPILTLGSIDCITWPDNWTTVTADGSPAAQFEHSILITKTGAEILTTY
SIO_010081: LOC121244892
subclass of: SO_0000673
so part of: LOC121244892
location: join(448836..448980,449322..449403,449689..449926,450728..450889,450964..451005,451742..451813,452005..452084,453280..453377,454130..454177,455063..455208)
location: region:448836-455208:1
so has part: feature:448836-448980:1:exon
so has part: feature:449322-449403:1:exon
so has part: feature:449689-449926:1:exon
so has part: feature:450728-450889:1:exon
so has part: feature:450964-451005:1:exon
so has part: feature:451742-451813:1:exon
so has part: feature:452005-452084:1:exon
so has part: feature:453280-453377:1:exon
so has part: feature:454130-454177:1:exon
so has part: feature:455063-455208:1:exon

XP_040999063.1
type: Protein
SIO_000068: ncbiprotein

position:448836:1
position: 448836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455208:1
position: 455208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448836-448980:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:449322-449403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:449689-449926:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450728-450889:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450964-451005:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:451742-451813:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:452005-452084:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:453280-453377:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:454130-454177:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:455063-455208:1:exon

LOC121244689
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244689
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(465852..467429)
location: region:465852-467429:-1
so has part: feature:465852-467429:-1:exon
subclass of: SO_0000010

121244689
type: Gene
SIO_000068: ncbigene

position:465852:-1
position: 465852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467429:-1
position: 467429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465852-467429:-1:exon

LOC121244689
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244689
product: zinc finger protein WIP6-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_041142862.1
SIO_010081: LOC121244689
subclass of: SO_0000673
so part of: LOC121244689
location: complement(join(465852..466490,466707..467429))
location: region:465852-467429:-1
so has part: feature:466707-467429:-1:exon
so has part: feature:465852-466490:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:466707-467429:-1:exon

position:466707:-1
position: 466707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:465852-466490:-1:exon

position:466490:-1
position: 466490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121244689
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244689
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein WIP6-like
translation: MFLSKPSTAQHKIKLYPAAFVYLLTFSFSRPLPNPLFKLLSLSLSLSLKSSHHRFTMHSPTFTYTPSSESAVWEADENSIFLSLGPPGPHNRKNPFYIPYSNHHVPHQIPSSVGGTASVALHVGPPSGPSSSNPDEIAEGQYWIPSPAQILAGPTQFSCTVCNKKFNRYNNMQMHMWAHGSQYRKGPESLRGSKPTSSILKLPCYCCAEGCKNNIEHPRSKPLKDFRTLQTHYKRMHGVKPYWCQKCGKAFAVRGDWKTHEKNCGKLWFCICGSNFKHKRSLKDHVKAFGDGHAPHSTRELCEVEEEEEDDDDHGTENENRGHGSVFFK
SIO_010081: LOC121244689
subclass of: SO_0000673
so part of: LOC121244689
location: complement(join(466020..466490,466707..467225))
location: region:466020-467225:-1
so has part: feature:466707-467225:-1:exon
so has part: feature:466020-466490:-1:exon

XP_040998796.1
type: Protein
SIO_000068: ncbiprotein

position:466020:-1
position: 466020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467225:-1
position: 467225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466707-467225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466020-466490:-1:exon

LOC121244629
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244629
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 473234..475947
location: region:473234-475947:1
so has part: feature:473234-475947:1:exon
subclass of: SO_0000010

121244629
type: Gene
SIO_000068: ncbigene

position:473234:1
position: 473234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475947:1
position: 475947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473234-475947:1:exon

LOC121244629
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244629
product: transcription factor HHO3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_041142788.1
SIO_010081: LOC121244629
subclass of: SO_0000673
so part of: LOC121244629
location: join(473234..473812,473920..474203,474323..474647,474835..474911,475309..475947)
location: region:473234-475947:1
so has part: feature:473234-473812:1:exon
so has part: feature:473920-474203:1:exon
so has part: feature:474323-474647:1:exon
so has part: feature:474835-474911:1:exon
so has part: feature:475309-475947:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:473234-473812:1:exon

position:473812:1
position: 473812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:473920-474203:1:exon

position:473920:1
position: 473920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474203:1
position: 474203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:474323-474647:1:exon

position:474323:1
position: 474323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474647:1
position: 474647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:474835-474911:1:exon

position:474835:1
position: 474835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474911:1
position: 474911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:475309-475947:1:exon

position:475309:1
position: 475309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244629
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244629
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor HHO3-like
translation: MQHHGGMSVQKYVKALEDELRKIQVFRRELPLCLELVTQAIEACRQQLSGTTTENNSHGQSESSEQTTSNDVPPVFEEFFPIKRSASSDDDNEEHHSHEANTETVIGNDSKKKSDWLRSVQLWNNPTSDPRPKEDVPRKATDLKRNGGGGGGGAFQPFQREKNVGKSSASEGKTPSSLAREVAPAVGVATTSSSAVTATGGSDGNDRREQREGQSERKQRRNWSPELHRRFLNALQQLGGSHAATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSIHNNGNPQPPQVVVVGGIWMPAPDYAAAMAASGEAAGVAAANGIYAPVAAPPPPAVQQASSFQKVQRLQHKECRPSKSQSEERFSHSGKRARSDSPATSSSTHTTTTSPVF
SIO_010081: LOC121244629
subclass of: SO_0000673
so part of: LOC121244629
location: join(473695..473812,473920..474203,474323..474647,474835..474911,475309..475680)
location: region:473695-475680:1
so has part: feature:473695-473812:1:exon
so has part: feature:473920-474203:1:exon
so has part: feature:474323-474647:1:exon
so has part: feature:474835-474911:1:exon
so has part: feature:475309-475680:1:exon

XP_040998722.1
type: Protein
SIO_000068: ncbiprotein

position:473695:1
position: 473695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475680:1
position: 475680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473695-473812:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473920-474203:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474323-474647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474835-474911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:475309-475680:1:exon

LOC121244915
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244915
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(480306..483888)
location: region:480306-483888:-1
so has part: feature:480306-483888:-1:exon
subclass of: SO_0000010

121244915
type: Gene
SIO_000068: ncbigene

position:480306:-1
position: 480306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483888:-1
position: 483888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480306-483888:-1:exon

LOC121244915
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244915
product: uncharacterized LOC121244915, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 104 samples with support for all annotated introns
transcript id: XM_041143161.1
SIO_010081: LOC121244915
subclass of: SO_0000673
so part of: LOC121244915
location: complement(join(480306..480616,480762..480884,482061..482151,482240..482431,482616..482734,482948..483106,483228..483353,483445..483538,483642..483888))
location: region:480306-483888:-1
so has part: feature:483642-483888:-1:exon
so has part: feature:483445-483538:-1:exon
so has part: feature:483228-483353:-1:exon
so has part: feature:482948-483106:-1:exon
so has part: feature:482616-482734:-1:exon
so has part: feature:482240-482431:-1:exon
so has part: feature:482061-482151:-1:exon
so has part: feature:480762-480884:-1:exon
so has part: feature:480306-480616:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:483642-483888:-1:exon

position:483642:-1
position: 483642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:483445-483538:-1:exon

position:483445:-1
position: 483445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483538:-1
position: 483538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:483228-483353:-1:exon

position:483228:-1
position: 483228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483353:-1
position: 483353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:482948-483106:-1:exon

position:482948:-1
position: 482948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483106:-1
position: 483106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:482616-482734:-1:exon

position:482616:-1
position: 482616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482734:-1
position: 482734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:482240-482431:-1:exon

position:482240:-1
position: 482240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482431:-1
position: 482431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:482061-482151:-1:exon

position:482061:-1
position: 482061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482151:-1
position: 482151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:480762-480884:-1:exon

position:480762:-1
position: 480762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480884:-1
position: 480884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:480306-480616:-1:exon

position:480616:-1
position: 480616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121244915
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244915
product: uncharacterized LOC121244915, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_041143162.1
SIO_010081: LOC121244915
subclass of: SO_0000673
so part of: LOC121244915
location: complement(join(480306..480651,480762..480884,482061..482151,482240..482431,482616..482734,482948..483106,483228..483353,483445..483538,483642..483888))
location: region:480306-483888:-1
so has part: feature:483642-483888:-1:exon
so has part: feature:483445-483538:-1:exon
so has part: feature:483228-483353:-1:exon
so has part: feature:482948-483106:-1:exon
so has part: feature:482616-482734:-1:exon
so has part: feature:482240-482431:-1:exon
so has part: feature:482061-482151:-1:exon
so has part: feature:480762-480884:-1:exon
so has part: feature:480306-480651:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:483642-483888:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:483445-483538:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:483228-483353:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:482948-483106:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:482616-482734:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:482240-482431:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:482061-482151:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:480762-480884:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:480306-480651:-1:exon

position:480651:-1
position: 480651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121244915
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244915
product: uncharacterized LOC121244915, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_041143159.1
SIO_010081: LOC121244915
subclass of: SO_0000673
so part of: LOC121244915
location: complement(join(480306..480581,480758..480884,482061..482151,482240..482431,482616..482734,482948..483106,483228..483353,483445..483538,483642..483888))
location: region:480306-483888:-1
so has part: feature:483642-483888:-1:exon
so has part: feature:483445-483538:-1:exon
so has part: feature:483228-483353:-1:exon
so has part: feature:482948-483106:-1:exon
so has part: feature:482616-482734:-1:exon
so has part: feature:482240-482431:-1:exon
so has part: feature:482061-482151:-1:exon
so has part: feature:480758-480884:-1:exon
so has part: feature:480306-480581:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:483642-483888:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:483445-483538:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:483228-483353:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:482948-483106:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:482616-482734:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:482240-482431:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:482061-482151:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:480758-480884:-1:exon

position:480758:-1
position: 480758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:480306-480581:-1:exon

position:480581:-1
position: 480581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121244915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244915
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121244915
translation: MAVGQFNSLPRLCRTTAPLSPISYTRLVSTVSIPVCTASNVLKLPTTRRNRAVSALVSEENAVGSSSSGTDVFKLTYLEGNSWLWDVGGLKILVDPILVGNLDFGIPWLYDAAKKFLKKFQLSDLPEIDCLLITQSLDDHCHLKTLKPLSEKSPNLRVVATPNARPLLDPLFSNVTYIEPGQSSVIEARNGSTVRIQATPGPVLGPPWQRPENGYLVNSPQGQQTLYYEPHCVYNKSFLGKERADIIITPVIKQLLPKFTLVSGQEDAVQLARVLHAKFIVPMKNGDLDSKGLLSSIIQVEGTIESFKELLSKELPDAQVLEPTPGVPLQIPAPSNLL
SIO_010081: LOC121244915
subclass of: SO_0000673
so part of: LOC121244915
location: complement(join(480792..480884,482061..482151,482240..482431,482616..482734,482948..483106,483228..483353,483445..483538,483642..483784))
location: region:480792-483784:-1
so has part: feature:483642-483784:-1:exon
so has part: feature:483445-483538:-1:exon
so has part: feature:483228-483353:-1:exon
so has part: feature:482948-483106:-1:exon
so has part: feature:482616-482734:-1:exon
so has part: feature:482240-482431:-1:exon
so has part: feature:482061-482151:-1:exon
so has part: feature:480792-480884:-1:exon

XP_040999093.1
type: Protein
SIO_000068: ncbiprotein

position:480792:-1
position: 480792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483784:-1
position: 483784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483642-483784:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:483445-483538:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:483228-483353:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:482948-483106:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:482616-482734:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:482240-482431:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:482061-482151:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:480792-480884:-1:exon

LOC121244915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244915
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121244915
translation: MAVGQFNSLPRLCRTTAPLSPISYTRLVSTVSIPVCTASNVLKLPTTRRNRAVSALVSEENAVGSSSSGTDVFKLTYLEGNSWLWDVGGLKILVDPILVGNLDFGIPWLYDAAKKFLKKFQLSDLPEIDCLLITQSLDDHCHLKTLKPLSEKSPNLRVVATPNARPLLDPLFSNVTYIEPGQSSVIEARNGSTVRIQATPGPVLGPPWQRPENGYLVNSPQGQQTLYYEPHCVYNKSFLGKERADIIITPVIKQLLPKFTLVSGQEDAVQLARVLHAKFIVPMKNGDLDSKGLLSSIIQVEGTIESFKELLSKELPDAQVLEPTPGVPLQIPAPSNLL
SIO_010081: LOC121244915
subclass of: SO_0000673
so part of: LOC121244915
location: complement(join(480792..480884,482061..482151,482240..482431,482616..482734,482948..483106,483228..483353,483445..483538,483642..483784))
location: region:480792-483784:-1
so has part: feature:483642-483784:-1:exon
so has part: feature:483445-483538:-1:exon
so has part: feature:483228-483353:-1:exon
so has part: feature:482948-483106:-1:exon
so has part: feature:482616-482734:-1:exon
so has part: feature:482240-482431:-1:exon
so has part: feature:482061-482151:-1:exon
so has part: feature:480792-480884:-1:exon

XP_040999095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:483642-483784:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:483445-483538:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:483228-483353:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:482948-483106:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:482616-482734:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:482240-482431:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:482061-482151:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:480792-480884:-1:exon

LOC121244915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244915
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121244915
translation: MAVGQFNSLPRLCRTTAPLSPISYTRLVSTVSIPVCTASNVLKLPTTRRNRAVSALVSEENAVGSSSSGTDVFKLTYLEGNSWLWDVGGLKILVDPILVGNLDFGIPWLYDAAKKFLKKFQLSDLPEIDCLLITQSLDDHCHLKTLKPLSEKSPNLRVVATPNARPLLDPLFSNVTYIEPGQSSVIEARNGSTVRIQATPGPVLGPPWQRPENGYLVNSPQGQQTLYYEPHCVYNKSFLGKERADIIITPVIKQLLPKFTLVSGQEDAVQLARVLHAKFIVPMKNGDLDSKGLLSSIIQVEGTIESFKELLSKELPDAQVLEPTPGVPLQIPAPSNLL
SIO_010081: LOC121244915
subclass of: SO_0000673
so part of: LOC121244915
location: complement(join(480792..480884,482061..482151,482240..482431,482616..482734,482948..483106,483228..483353,483445..483538,483642..483784))
location: region:480792-483784:-1
so has part: feature:483642-483784:-1:exon
so has part: feature:483445-483538:-1:exon
so has part: feature:483228-483353:-1:exon
so has part: feature:482948-483106:-1:exon
so has part: feature:482616-482734:-1:exon
so has part: feature:482240-482431:-1:exon
so has part: feature:482061-482151:-1:exon
so has part: feature:480792-480884:-1:exon

XP_040999096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:483642-483784:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:483445-483538:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:483228-483353:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:482948-483106:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:482616-482734:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:482240-482431:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:482061-482151:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:480792-480884:-1:exon

LOC121243956
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121243956
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(484258..492693)
location: region:484258-492693:-1
so has part: feature:484258-492693:-1:exon

121243956
type: Gene
SIO_000068: ncbigene

position:484258:-1
position: 484258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:492693:-1
position: 492693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484258-492693:-1:exon

LOC121243956
type: Exon
subclass of: SO_0000147
RO_0002162: 2249226
gene: LOC121243956
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC121243956
subclass of: SO_0000673
so part of: LOC121243956
location: complement(484258..484670)
location: region:484258-484670:-1
so has part: feature:484258-484670:-1:exon

position:484670:-1
position: 484670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484258-484670:-1:exon

LOC121243956
type: Exon
subclass of: SO_0000147
RO_0002162: 2249226
gene: LOC121243956
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC121243956
subclass of: SO_0000673
so part of: LOC121243956
location: complement(485961..486104)
location: region:485961-486104:-1
so has part: feature:485961-486104:-1:exon

position:485961:-1
position: 485961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486104:-1
position: 486104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485961-486104:-1:exon

LOC121243956
type: Exon
subclass of: SO_0000147
RO_0002162: 2249226
gene: LOC121243956
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC121243956
subclass of: SO_0000673
so part of: LOC121243956
location: complement(486331..486439)
location: region:486331-486439:-1
so has part: feature:486331-486439:-1:exon

position:486331:-1
position: 486331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486439:-1
position: 486439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486331-486439:-1:exon

LOC121243956
type: Exon
subclass of: SO_0000147
RO_0002162: 2249226
gene: LOC121243956
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC121243956
subclass of: SO_0000673
so part of: LOC121243956
location: complement(491357..491414)
location: region:491357-491414:-1
so has part: feature:491357-491414:-1:exon

position:491357:-1
position: 491357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491414:-1
position: 491414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491357-491414:-1:exon

LOC121243956
type: Exon
subclass of: SO_0000147
RO_0002162: 2249226
gene: LOC121243956
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC121243956
subclass of: SO_0000673
so part of: LOC121243956
location: complement(491502..491766)
location: region:491502-491766:-1
so has part: feature:491502-491766:-1:exon

position:491502:-1
position: 491502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491766:-1
position: 491766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491502-491766:-1:exon

LOC121243956
type: Exon
subclass of: SO_0000147
RO_0002162: 2249226
gene: LOC121243956
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC121243956
subclass of: SO_0000673
so part of: LOC121243956
location: complement(492040..492207)
location: region:492040-492207:-1
so has part: feature:492040-492207:-1:exon

position:492040:-1
position: 492040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:492207:-1
position: 492207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492040-492207:-1:exon

LOC121243956
type: Exon
subclass of: SO_0000147
RO_0002162: 2249226
gene: LOC121243956
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC121243956
subclass of: SO_0000673
so part of: LOC121243956
location: complement(492325..492693)
location: region:492325-492693:-1
so has part: feature:492325-492693:-1:exon

position:492325:-1
position: 492325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492325-492693:-1:exon

LOC121244081
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244081
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 500587..515768
location: region:500587-515768:1
so has part: feature:500587-515768:1:exon
subclass of: SO_0000010

121244081
type: Gene
SIO_000068: ncbigene

position:500587:1
position: 500587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515768:1
position: 515768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500587-515768:1:exon

LOC121244081
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244081
product: mediator of RNA polymerase II transcription subunit 25
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 13 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 104 samples with support for all annotated introns
transcript id: XM_041142122.1
SIO_010081: LOC121244081
subclass of: SO_0000673
so part of: LOC121244081
location: join(500587..500814,501618..501648,502089..502152,504293..504423,506439..506648,506752..506817,507191..507401,508205..508272,508378..509226,510029..510082,511192..511220,513509..513577,513699..513783,514457..514543,514923..515768)
location: region:500587-515768:1
so has part: feature:500587-500814:1:exon
so has part: feature:501618-501648:1:exon
so has part: feature:502089-502152:1:exon
so has part: feature:504293-504423:1:exon
so has part: feature:506439-506648:1:exon
so has part: feature:506752-506817:1:exon
so has part: feature:507191-507401:1:exon
so has part: feature:508205-508272:1:exon
so has part: feature:508378-509226:1:exon
so has part: feature:510029-510082:1:exon
so has part: feature:511192-511220:1:exon
so has part: feature:513509-513577:1:exon
so has part: feature:513699-513783:1:exon
so has part: feature:514457-514543:1:exon
so has part: feature:514923-515768:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:500587-500814:1:exon

position:500814:1
position: 500814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:501618-501648:1:exon

position:501618:1
position: 501618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501648:1
position: 501648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:502089-502152:1:exon

position:502089:1
position: 502089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502152:1
position: 502152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:504293-504423:1:exon

position:504293:1
position: 504293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504423:1
position: 504423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:506439-506648:1:exon

position:506439:1
position: 506439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506648:1
position: 506648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:506752-506817:1:exon

position:506752:1
position: 506752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506817:1
position: 506817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:507191-507401:1:exon

position:507191:1
position: 507191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507401:1
position: 507401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:508205-508272:1:exon

position:508205:1
position: 508205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508272:1
position: 508272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:508378-509226:1:exon

position:508378:1
position: 508378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509226:1
position: 509226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:510029-510082:1:exon

position:510029:1
position: 510029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510082:1
position: 510082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:511192-511220:1:exon

position:511192:1
position: 511192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511220:1
position: 511220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:513509-513577:1:exon

position:513509:1
position: 513509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513577:1
position: 513577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:513699-513783:1:exon

position:513699:1
position: 513699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513783:1
position: 513783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:514457-514543:1:exon

position:514457:1
position: 514457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514543:1
position: 514543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:514923-515768:1:exon

position:514923:1
position: 514923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244081
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244081
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 25
translation: MADKKLIVVVEGTAAMGPFWQSIVSDYLEKIIRSFCGNELNGQKPPTSHAELSVVTFYTHGSYCGCLVQRTGWTRDVDIFLQWLSAIPFAGGGFYDAAIAEGLAEALMMFPILQNGNPNQQNVDTQRHCILVAASNPYPLPTPVYRPQLQNLEKNENLEEQTESRTSDAETVAKSFAQCSVSLSVICPKQLPKLKAIYNAGKRNPRIGDPPVDNVKNPQFLVLISENFMEARAALSRSGITSLPSNQSPVNVDMAPITSVTGPPPASIPLGNGSIMNRQAITAGNNPPATVKVEPSTVTSMLSGPGFSHIPSVARAASQGIPSLQSSSPSSTSQEMITNNDNVQDLKPIVSGVTQPLRPVGPAPANVNILNNLSQARQVMNSAALTGGSSIGLQSMGQTPISMHMSNMISSGMATSVPAAQNVLSSGQSAIPSISGSGPLTGNGQVAQNPGLASFNSATSNASGNSNLGISQPMGNLQGGVSMGQSGPGMNQGNLSGVQMAQSGIGMNQNMMSGLGPSVVSSGTGTMIPTPGMPQQVQSGMQSLGVNNNSATNMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASETLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLSQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQISSQQQQQQQMQQQQHQQMQPQQHTQLQQQQLQQLQQQQLPQLQQQQQLTQMQQQQIPQLQQQQQLPQMQPQQIPQLQQQQIPQLQQQQPLSQLQPQQQLPQMQQQQPISQLQTQQQQLPQLQQLQQQLPQQQQMVGTGMGQAYVQGPGRSQLVSQGQVSSQGQPNMSGGGFMS
SIO_010081: LOC121244081
subclass of: SO_0000673
so part of: LOC121244081
location: join(500717..500814,501618..501648,502089..502152,504293..504423,506439..506648,506752..506817,507191..507401,508205..508272,508378..509226,510029..510082,511192..511220,513509..513577,513699..513783,514457..514543,514923..515471)
location: region:500717-515471:1
so has part: feature:500717-500814:1:exon
so has part: feature:501618-501648:1:exon
so has part: feature:502089-502152:1:exon
so has part: feature:504293-504423:1:exon
so has part: feature:506439-506648:1:exon
so has part: feature:506752-506817:1:exon
so has part: feature:507191-507401:1:exon
so has part: feature:508205-508272:1:exon
so has part: feature:508378-509226:1:exon
so has part: feature:510029-510082:1:exon
so has part: feature:511192-511220:1:exon
so has part: feature:513509-513577:1:exon
so has part: feature:513699-513783:1:exon
so has part: feature:514457-514543:1:exon
so has part: feature:514923-515471:1:exon

XP_040998056.1
type: Protein
SIO_000068: ncbiprotein

position:500717:1
position: 500717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515471:1
position: 515471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500717-500814:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:501618-501648:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:502089-502152:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:504293-504423:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:506439-506648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:506752-506817:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:507191-507401:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:508205-508272:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:508378-509226:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:510029-510082:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:511192-511220:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:513509-513577:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:513699-513783:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:514457-514543:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:514923-515471:1:exon

LOC121244754
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244754
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 516936..519465
location: region:516936-519465:1
so has part: feature:516936-519465:1:exon

121244754
type: Gene
SIO_000068: ncbigene

position:516936:1
position: 516936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519465:1
position: 519465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516936-519465:1:exon

LOC121244754
type: Exon
subclass of: SO_0000147
RO_0002162: 2249226
gene: LOC121244754
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121244754
subclass of: SO_0000673
so part of: LOC121244754
location: 516936..517101
location: region:516936-517101:1
so has part: feature:516936-517101:1:exon

position:517101:1
position: 517101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516936-517101:1:exon

LOC121244754
type: Exon
subclass of: SO_0000147
RO_0002162: 2249226
gene: LOC121244754
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121244754
subclass of: SO_0000673
so part of: LOC121244754
location: 517218..517357
location: region:517218-517357:1
so has part: feature:517218-517357:1:exon

position:517218:1
position: 517218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517357:1
position: 517357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517218-517357:1:exon

LOC121244754
type: Exon
subclass of: SO_0000147
RO_0002162: 2249226
gene: LOC121244754
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121244754
subclass of: SO_0000673
so part of: LOC121244754
location: 517391..517773
location: region:517391-517773:1
so has part: feature:517391-517773:1:exon

position:517391:1
position: 517391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517773:1
position: 517773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517391-517773:1:exon

LOC121244754
type: Exon
subclass of: SO_0000147
RO_0002162: 2249226
gene: LOC121244754
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121244754
subclass of: SO_0000673
so part of: LOC121244754
location: 519111..519465
location: region:519111-519465:1
so has part: feature:519111-519465:1:exon

position:519111:1
position: 519111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519111-519465:1:exon

LOC121244860
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244860
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(522263..527422)
location: region:522263-527422:-1
so has part: feature:522263-527422:-1:exon
subclass of: SO_0000010

121244860
type: Gene
SIO_000068: ncbigene

position:522263:-1
position: 522263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527422:-1
position: 527422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522263-527422:-1:exon

LOC121244860
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244860
product: GDT1-like protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 67 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_041143083.1
SIO_010081: LOC121244860
subclass of: SO_0000673
so part of: LOC121244860
location: complement(join(522263..522554,522645..522717,524142..524203,524293..524337,524418..524492,524671..524718,524802..524838,524947..525035,525962..526009,526115..526174,527037..527105,527222..527422))
location: region:522263-527422:-1
so has part: feature:527222-527422:-1:exon
so has part: feature:527037-527105:-1:exon
so has part: feature:526115-526174:-1:exon
so has part: feature:525962-526009:-1:exon
so has part: feature:524947-525035:-1:exon
so has part: feature:524802-524838:-1:exon
so has part: feature:524671-524718:-1:exon
so has part: feature:524418-524492:-1:exon
so has part: feature:524293-524337:-1:exon
so has part: feature:524142-524203:-1:exon
so has part: feature:522645-522717:-1:exon
so has part: feature:522263-522554:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:527222-527422:-1:exon

position:527222:-1
position: 527222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:527037-527105:-1:exon

position:527037:-1
position: 527037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527105:-1
position: 527105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:526115-526174:-1:exon

position:526115:-1
position: 526115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526174:-1
position: 526174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:525962-526009:-1:exon

position:525962:-1
position: 525962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526009:-1
position: 526009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:524947-525035:-1:exon

position:524947:-1
position: 524947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525035:-1
position: 525035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:524802-524838:-1:exon

position:524802:-1
position: 524802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524838:-1
position: 524838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:524671-524718:-1:exon

position:524671:-1
position: 524671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524718:-1
position: 524718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:524418-524492:-1:exon

position:524418:-1
position: 524418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524492:-1
position: 524492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:524293-524337:-1:exon

position:524293:-1
position: 524293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524337:-1
position: 524337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:524142-524203:-1:exon

position:524142:-1
position: 524142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524203:-1
position: 524203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:522645-522717:-1:exon

position:522645:-1
position: 522645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522717:-1
position: 522717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:522263-522554:-1:exon

position:522554:-1
position: 522554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121244860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244860
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GDT1-like protein 4
translation: MSSVVQGLTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLTGCLSALIVMTLLSALVGWAAPNLISRKWTHHVTTLLFFGFGLWSLWEGFTGEGEAEELAEVEAKLNADWKADTGTTKKRSKDDDDDDLKKQKRPFLSQFFSPILLKAFSITFFGEWGDKSQLATIGLAADENPFGVILGGIIGQALCTTAAVLGGRSLASQISEKIVALSGGVLFIVFGIQSFLSTVES
SIO_010081: LOC121244860
subclass of: SO_0000673
so part of: LOC121244860
location: complement(join(522483..522554,522645..522717,524142..524203,524293..524337,524418..524492,524671..524718,524802..524838,524947..525035,525962..526009,526115..526174,527037..527105,527222..527239))
location: region:522483-527239:-1
so has part: feature:527222-527239:-1:exon
so has part: feature:527037-527105:-1:exon
so has part: feature:526115-526174:-1:exon
so has part: feature:525962-526009:-1:exon
so has part: feature:524947-525035:-1:exon
so has part: feature:524802-524838:-1:exon
so has part: feature:524671-524718:-1:exon
so has part: feature:524418-524492:-1:exon
so has part: feature:524293-524337:-1:exon
so has part: feature:524142-524203:-1:exon
so has part: feature:522645-522717:-1:exon
so has part: feature:522483-522554:-1:exon

XP_040999017.1
type: Protein
SIO_000068: ncbiprotein

position:522483:-1
position: 522483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527239:-1
position: 527239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527222-527239:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:527037-527105:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526115-526174:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:525962-526009:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:524947-525035:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:524802-524838:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:524671-524718:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:524418-524492:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:524293-524337:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:524142-524203:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:522645-522717:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:522483-522554:-1:exon

LOC121244768
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244768
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 533209..539299
location: region:533209-539299:1
so has part: feature:533209-539299:1:exon
subclass of: SO_0000010

121244768
type: Gene
SIO_000068: ncbigene

position:533209:1
position: 533209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539299:1
position: 539299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533209-539299:1:exon

LOC121244768
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244768
product: CTL-like protein DDB_G0274487
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 92 samples with support for all annotated introns
transcript id: XM_041142974.1
SIO_010081: LOC121244768
subclass of: SO_0000673
so part of: LOC121244768
location: join(533209..533693,534152..534612,535953..536136,536251..536475,536565..536681,537387..537620,538993..539299)
location: region:533209-539299:1
so has part: feature:533209-533693:1:exon
so has part: feature:534152-534612:1:exon
so has part: feature:535953-536136:1:exon
so has part: feature:536251-536475:1:exon
so has part: feature:536565-536681:1:exon
so has part: feature:537387-537620:1:exon
so has part: feature:538993-539299:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:533209-533693:1:exon

position:533693:1
position: 533693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:534152-534612:1:exon

position:534152:1
position: 534152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534612:1
position: 534612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:535953-536136:1:exon

position:535953:1
position: 535953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536136:1
position: 536136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:536251-536475:1:exon

position:536251:1
position: 536251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536475:1
position: 536475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:536565-536681:1:exon

position:536565:1
position: 536565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536681:1
position: 536681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:537387-537620:1:exon

position:537387:1
position: 537387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537620:1
position: 537620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:538993-539299:1:exon

position:538993:1
position: 538993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244768
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244768
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CTL-like protein DDB_G0274487
translation: MIDSQSSNYSFDSASIPATDQNVVRSRRSCDGGQMLASAPSRRWRDIFWLAVFMIHLAVMGFSLVVLGLNRFEKTDRLNIDKYTNGFMEQHKGLTENYWPMYAVAGGVGTALGCTWLFLLGSHANVMMKVSVHILTTYLAVISVLCFWGELFLWGVVFATGAALQFLYVISVIDRLPFTMLVLQKAVKMVWSLPEVMRVAYVFMFVMLLWVELWSFGAAGVVASSMGVGGCWWLLLVLSVSLFWTGAVLCNALHVIVSGMVFLVLIHGGRESSSIPPSSLMKSLRYAVTTSFGSICYGSLFTAAIRMLRWEIRGVRSKIGNNECLLCCVDFLFHLVETLVRFFNKYAYVQIAVTGKSFNRSARDAWELFQSTGVEALVAYDCSGAVLLMGILLGGLVTGTCSGVWTWIKWTDRVSMVGSTAMLMGMVLVGLAMVVVESAVTSIYICYAEDPLLIQRWDSEFFNQMSEMLHQRLQYRSARARKVLTQNRLDGHIQEIPPA
SIO_010081: LOC121244768
subclass of: SO_0000673
so part of: LOC121244768
location: join(533631..533693,534152..534612,535953..536136,536251..536475,536565..536681,537387..537620,538993..539208)
location: region:533631-539208:1
so has part: feature:533631-533693:1:exon
so has part: feature:534152-534612:1:exon
so has part: feature:535953-536136:1:exon
so has part: feature:536251-536475:1:exon
so has part: feature:536565-536681:1:exon
so has part: feature:537387-537620:1:exon
so has part: feature:538993-539208:1:exon

XP_040998908.1
type: Protein
SIO_000068: ncbiprotein

position:533631:1
position: 533631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539208:1
position: 539208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533631-533693:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:534152-534612:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:535953-536136:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536251-536475:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536565-536681:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:537387-537620:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:538993-539208:1:exon

LOC121245131
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121245131
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(540427..541596)
location: region:540427-541596:-1
so has part: feature:540427-541596:-1:exon
subclass of: SO_0000011

121245131
type: Gene
SIO_000068: ncbigene

position:540427:-1
position: 540427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541596:-1
position: 541596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540427-541596:-1:exon

LOC121245131
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2249226
nc RNA class: lncRNA
gene: LOC121245131
product: uncharacterized LOC121245131
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005936544.1
SIO_010081: LOC121245131
subclass of: SO_0000673
so part of: LOC121245131
location: complement(join(540427..541031,541468..541596))
location: region:540427-541596:-1
so has part: feature:541468-541596:-1:exon
so has part: feature:540427-541031:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:541468-541596:-1:exon

position:541468:-1
position: 541468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:540427-541031:-1:exon

position:541031:-1
position: 541031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121245130
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121245130
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 541415..546087
location: region:541415-546087:1
so has part: feature:541415-546087:1:exon
subclass of: SO_0000010

121245130
type: Gene
SIO_000068: ncbigene

position:541415:1
position: 541415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546087:1
position: 546087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541415-546087:1:exon

LOC121245130
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121245130
product: transcription factor PERIANTHIA-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_041143446.1
SIO_010081: LOC121245130
subclass of: SO_0000673
so part of: LOC121245130
location: join(541415..541683,541856..541959,542069..542118,542241..542417,543614..543691,543784..543843,544308..544385,544499..544556,544846..545117,545198..545443,545601..546087)
location: region:541415-546087:1
so has part: feature:541415-541683:1:exon
so has part: feature:541856-541959:1:exon
so has part: feature:542069-542118:1:exon
so has part: feature:542241-542417:1:exon
so has part: feature:543614-543691:1:exon
so has part: feature:543784-543843:1:exon
so has part: feature:544308-544385:1:exon
so has part: feature:544499-544556:1:exon
so has part: feature:544846-545117:1:exon
so has part: feature:545198-545443:1:exon
so has part: feature:545601-546087:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:541415-541683:1:exon

position:541683:1
position: 541683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:541856-541959:1:exon

position:541856:1
position: 541856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541959:1
position: 541959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:542069-542118:1:exon

position:542069:1
position: 542069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542118:1
position: 542118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:542241-542417:1:exon

position:542241:1
position: 542241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542417:1
position: 542417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:543614-543691:1:exon

position:543614:1
position: 543614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543691:1
position: 543691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:543784-543843:1:exon

position:543784:1
position: 543784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543843:1
position: 543843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:544308-544385:1:exon

position:544308:1
position: 544308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544385:1
position: 544385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:544499-544556:1:exon

position:544499:1
position: 544499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544556:1
position: 544556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:544846-545117:1:exon

position:544846:1
position: 544846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545117:1
position: 545117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:545198-545443:1:exon

position:545198:1
position: 545198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545443:1
position: 545443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:545601-546087:1:exon

position:545601:1
position: 545601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121245130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121245130
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor TGA2.3-like isoform X1
translation: MQSFKAALANHLQLHCHSSFNLRGDGSGRDQTRFTDLGELEHSAAAFHHNEPVDLSPVSFAVLPNNLHYGTLDTSIGCVDTGQQFMYQKGTTTIGATLGNGQHIENWGESGMAADTSQQTDTSTDIDTDDKNKFLGVHNGSLMVVDSVDQSKAKAADQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRTRQQGAFSATGYSGDHIHSINGNGSLAFDMDYARWLDEHNRLINDLRLALNSHMGDNELDVLVDGVMVHYDEIFRLKSIGAKADVFHMLSGMWKTPAERCFMWLGGFRSSELLKILGNHLEPLTEQQLMGICNLQQSSQQAEDALSQGMEALQQSLVETLSSTSLGSCGSGNVADYMGQMAIAMGKLATLENFLHQADLLRQQTLQQMHRILTTRQAACALLVISDYISRVRALSSLWLARPRE
SIO_010081: LOC121245130
subclass of: SO_0000673
so part of: LOC121245130
location: join(541616..541683,541856..541959,542069..542118,542241..542417,543614..543691,543784..543843,544308..544385,544499..544556,544846..545117,545198..545443,545601..545747)
location: region:541616-545747:1
so has part: feature:541616-541683:1:exon
so has part: feature:541856-541959:1:exon
so has part: feature:542069-542118:1:exon
so has part: feature:542241-542417:1:exon
so has part: feature:543614-543691:1:exon
so has part: feature:543784-543843:1:exon
so has part: feature:544308-544385:1:exon
so has part: feature:544499-544556:1:exon
so has part: feature:544846-545117:1:exon
so has part: feature:545198-545443:1:exon
so has part: feature:545601-545747:1:exon

XP_040999380.1
type: Protein
SIO_000068: ncbiprotein

position:541616:1
position: 541616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545747:1
position: 545747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541616-541683:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:541856-541959:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:542069-542118:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:542241-542417:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:543614-543691:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:543784-543843:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:544308-544385:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:544499-544556:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:544846-545117:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:545198-545443:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:545601-545747:1:exon

LOC121245130
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121245130
product: transcription factor PERIANTHIA-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_041143447.1
SIO_010081: LOC121245130
subclass of: SO_0000673
so part of: LOC121245130
location: join(541856..541959,542241..542417,543614..543691,543784..543843,544308..544385,544499..544556,544846..545117,545198..545443,545601..546087)
location: region:541856-546087:1
so has part: feature:541856-541959:1:exon
so has part: feature:542241-542417:1:exon
so has part: feature:543614-543691:1:exon
so has part: feature:543784-543843:1:exon
so has part: feature:544308-544385:1:exon
so has part: feature:544499-544556:1:exon
so has part: feature:544846-545117:1:exon
so has part: feature:545198-545443:1:exon
so has part: feature:545601-546087:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:541856-541959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:542241-542417:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:543614-543691:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:543784-543843:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:544308-544385:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:544499-544556:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:544846-545117:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:545198-545443:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:545601-546087:1:exon

LOC121245130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121245130
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor TGA2.3-like isoform X2
translation: MYQKGTTTIGATLGNGQHIENWGESGMAADTSQQTDTSTDIDTDDKNKFLGVHNGSLMVVDSVDQSKAKAADQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRTRQQGAFSATGYSGDHIHSINGNGSLAFDMDYARWLDEHNRLINDLRLALNSHMGDNELDVLVDGVMVHYDEIFRLKSIGAKADVFHMLSGMWKTPAERCFMWLGGFRSSELLKILGNHLEPLTEQQLMGICNLQQSSQQAEDALSQGMEALQQSLVETLSSTSLGSCGSGNVADYMGQMAIAMGKLATLENFLHQADLLRQQTLQQMHRILTTRQAACALLVISDYISRVRALSSLWLARPRE
SIO_010081: LOC121245130
subclass of: SO_0000673
so part of: LOC121245130
location: join(542274..542417,543614..543691,543784..543843,544308..544385,544499..544556,544846..545117,545198..545443,545601..545747)
location: region:542274-545747:1
so has part: feature:542274-542417:1:exon
so has part: feature:543614-543691:1:exon
so has part: feature:543784-543843:1:exon
so has part: feature:544308-544385:1:exon
so has part: feature:544499-544556:1:exon
so has part: feature:544846-545117:1:exon
so has part: feature:545198-545443:1:exon
so has part: feature:545601-545747:1:exon

XP_040999381.1
type: Protein
SIO_000068: ncbiprotein

position:542274:1
position: 542274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542274-542417:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:543614-543691:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:543784-543843:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:544308-544385:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:544499-544556:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:544846-545117:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:545198-545443:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:545601-545747:1:exon

LOC121245130
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121245130
product: transcription factor PERIANTHIA-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_041143448.1
SIO_010081: LOC121245130
subclass of: SO_0000673
so part of: LOC121245130
location: join(542949..543524,543614..543691,543784..543843,544308..544385,544499..544556,544846..545117,545198..545443,545601..546087)
location: region:542949-546087:1
so has part: feature:542949-543524:1:exon
so has part: feature:543614-543691:1:exon
so has part: feature:543784-543843:1:exon
so has part: feature:544308-544385:1:exon
so has part: feature:544499-544556:1:exon
so has part: feature:544846-545117:1:exon
so has part: feature:545198-545443:1:exon
so has part: feature:545601-546087:1:exon

position:542949:1
position: 542949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542949-543524:1:exon

position:543524:1
position: 543524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:543614-543691:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:543784-543843:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:544308-544385:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:544499-544556:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:544846-545117:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:545198-545443:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:545601-546087:1:exon

LOC121245130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121245130
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor PERIANTHIA-like isoform X3
translation: MVVDSVDQSKAKAADQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRTRQQGAFSATGYSGDHIHSINGNGSLAFDMDYARWLDEHNRLINDLRLALNSHMGDNELDVLVDGVMVHYDEIFRLKSIGAKADVFHMLSGMWKTPAERCFMWLGGFRSSELLKILGNHLEPLTEQQLMGICNLQQSSQQAEDALSQGMEALQQSLVETLSSTSLGSCGSGNVADYMGQMAIAMGKLATLENFLHQADLLRQQTLQQMHRILTTRQAACALLVISDYISRVRALSSLWLARPRE
SIO_010081: LOC121245130
subclass of: SO_0000673
so part of: LOC121245130
location: join(543641..543691,543784..543843,544308..544385,544499..544556,544846..545117,545198..545443,545601..545747)
location: region:543641-545747:1
so has part: feature:543641-543691:1:exon
so has part: feature:543784-543843:1:exon
so has part: feature:544308-544385:1:exon
so has part: feature:544499-544556:1:exon
so has part: feature:544846-545117:1:exon
so has part: feature:545198-545443:1:exon
so has part: feature:545601-545747:1:exon

XP_040999382.1
type: Protein
SIO_000068: ncbiprotein

position:543641:1
position: 543641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543641-543691:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:543784-543843:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544308-544385:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:544499-544556:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:544846-545117:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:545198-545443:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:545601-545747:1:exon

LOC121244755
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244755
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 546832..548504
location: region:546832-548504:1
so has part: feature:546832-548504:1:exon
subclass of: SO_0000010

121244755
type: Gene
SIO_000068: ncbigene

position:546832:1
position: 546832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548504:1
position: 548504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546832-548504:1:exon

LOC121244755
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244755
product: protein PLANT CADMIUM RESISTANCE 2-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041142960.1
SIO_010081: LOC121244755
subclass of: SO_0000673
so part of: LOC121244755
location: join(546832..547045,547771..547841,547952..548164,548425..548504)
location: region:546832-548504:1
so has part: feature:546832-547045:1:exon
so has part: feature:547771-547841:1:exon
so has part: feature:547952-548164:1:exon
so has part: feature:548425-548504:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:546832-547045:1:exon

position:547045:1
position: 547045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:547771-547841:1:exon

position:547771:1
position: 547771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547841:1
position: 547841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:547952-548164:1:exon

position:547952:1
position: 547952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548164:1
position: 548164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:548425-548504:1:exon

position:548425:1
position: 548425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244755
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein PLANT CADMIUM RESISTANCE 2-like
translation: MEEPSAPPQPPPLSSDFQRTPTTVGLPVTASIINQENSASVRPTTASSDLNSHFPVPWSSGLCDCCDDVSSCCLTCWCPCVTFGXIAEIVDRGSTSCGVSGALYTLILCVTGCSCLYSCFYRSKLRGQYFLEESPCTDCCVHCFCQECALCQEYRELKHHGFDTSIGWHGNVERQKRIAATNPPAVQGGMTR
SIO_010081: LOC121244755
subclass of: SO_0000673
so part of: LOC121244755
location: join(546832..547045,547771..547841,547952..548164,548425..548504)
location: region:546832-548504:1
so has part: feature:546832-547045:1:exon
so has part: feature:547771-547841:1:exon
so has part: feature:547952-548164:1:exon
so has part: feature:548425-548504:1:exon

XP_040998894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:546832-547045:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:547771-547841:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:547952-548164:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:548425-548504:1:exon

LOC121244601
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244601
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(555255..559366)
location: region:555255-559366:-1
so has part: feature:555255-559366:-1:exon
subclass of: SO_0000010

121244601
type: Gene
SIO_000068: ncbigene

position:555255:-1
position: 555255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559366:-1
position: 559366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555255-559366:-1:exon

LOC121244601
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244601
product: aluminum-activated malate transporter 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_041142751.1
SIO_010081: LOC121244601
subclass of: SO_0000673
so part of: LOC121244601
location: complement(join(555255..556330,557723..557859,557978..558247,558359..558496,558914..559366))
location: region:555255-559366:-1
so has part: feature:558914-559366:-1:exon
so has part: feature:558359-558496:-1:exon
so has part: feature:557978-558247:-1:exon
so has part: feature:557723-557859:-1:exon
so has part: feature:555255-556330:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:558914-559366:-1:exon

position:558914:-1
position: 558914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:558359-558496:-1:exon

position:558359:-1
position: 558359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558496:-1
position: 558496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:557978-558247:-1:exon

position:557978:-1
position: 557978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558247:-1
position: 558247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:557723-557859:-1:exon

position:557723:-1
position: 557723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557859:-1
position: 557859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:555255-556330:-1:exon

position:556330:-1
position: 556330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121244601
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244601
product: aluminum-activated malate transporter 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 103 samples with support for all annotated introns
transcript id: XM_041142750.1
SIO_010081: LOC121244601
subclass of: SO_0000673
so part of: LOC121244601
location: complement(join(555255..556330,557485..557631,557723..557859,557978..558247,558359..558496,558914..559366))
location: region:555255-559366:-1
so has part: feature:558914-559366:-1:exon
so has part: feature:558359-558496:-1:exon
so has part: feature:557978-558247:-1:exon
so has part: feature:557723-557859:-1:exon
so has part: feature:557485-557631:-1:exon
so has part: feature:555255-556330:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:558914-559366:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:558359-558496:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:557978-558247:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:557723-557859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:557485-557631:-1:exon

position:557485:-1
position: 557485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557631:-1
position: 557631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:555255-556330:-1:exon

LOC121244601
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244601
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aluminum-activated malate transporter 4 isoform X2
translation: MATKIGSFRHSFAERSKERLLSRKAYSELGLGSSYGGEDDGVKGRFFRRLSDGILNFWAGLRETSVKLYEMGRSDPRKLLFAAKMGISLALVSLVIFLKDPLKDVNQYSIWAILTVVVVFEFSVGATLNKGLNRALGTFSAGGLALGIAEVSTRAGNLEEVIIVISIFIAGFCASYTKLYPPMKSYEYGFRVFLLTFCIVLVSGNSSSQFLQTAFYRLLLIAIGAGICLVVNICLYPIWSGEDLHKLVVKNFQGVATSLEGCVSGYLNCVEYERVPSKILTYQASDDPLYSGYRSAVQSSSQEESLAPAEKRKVFSRELQRVGAEGAKVLLELGSKVEKMEKLSSKDILFEVHEAAEELQMKIDRKSYLLVNSDNWEDVRRAKEFEDPQNFIDVKDNENKGIVINSLSETWDRQNPNISVEPSMPLWISSESVLNKPVSWPQLSFTGDTRLNEQESRVYESASSLSLATFSSLLIEFVARLQNLVDEFEELSEKANFKEPLDPSNQAKEAVGFWTRLFRCFH
SIO_010081: LOC121244601
subclass of: SO_0000673
so part of: LOC121244601
location: complement(join(555680..556330,557723..557859,557978..558247,558359..558496,558914..559286))
location: region:555680-559286:-1
so has part: feature:558914-559286:-1:exon
so has part: feature:558359-558496:-1:exon
so has part: feature:557978-558247:-1:exon
so has part: feature:557723-557859:-1:exon
so has part: feature:555680-556330:-1:exon

XP_040998685.1
type: Protein
SIO_000068: ncbiprotein

position:555680:-1
position: 555680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559286:-1
position: 559286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558914-559286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:558359-558496:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:557978-558247:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:557723-557859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:555680-556330:-1:exon

LOC121244601
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244601
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aluminum-activated malate transporter 4 isoform X1
translation: MATKIGSFRHSFAERSKERLLSRKAYSELGLGSSYGGEDDGVKGRFFRRLSDGILNFWAGLRETSVKLYEMGRSDPRKLLFAAKMGISLALVSLVIFLKDPLKDVNQYSIWAILTVVVVFEFSVGATLNKGLNRALGTFSAGGLALGIAEVSTRAGNLEEVIIVISIFIAGFCASYTKLYPPMKSYEYGFRVFLLTFCIVLVSGNSSSQFLQTAFYRLLLIAIGAGICLVVNICLYPIWSGEDLHKLVVKNFQGVATSLEGCVSGYLNCVEYERVPSKILTYQASDDPLYSGYRSAVQSSSQEESLLDFAIWEPPHGPYKGFNYPWRNYAKVSGSLRHCAFMVMAMHGCILSEIQAPAEKRKVFSRELQRVGAEGAKVLLELGSKVEKMEKLSSKDILFEVHEAAEELQMKIDRKSYLLVNSDNWEDVRRAKEFEDPQNFIDVKDNENKGIVINSLSETWDRQNPNISVEPSMPLWISSESVLNKPVSWPQLSFTGDTRLNEQESRVYESASSLSLATFSSLLIEFVARLQNLVDEFEELSEKANFKEPLDPSNQAKEAVGFWTRLFRCFH
SIO_010081: LOC121244601
subclass of: SO_0000673
so part of: LOC121244601
location: complement(join(555680..556330,557485..557631,557723..557859,557978..558247,558359..558496,558914..559286))
location: region:555680-559286:-1
so has part: feature:558914-559286:-1:exon
so has part: feature:558359-558496:-1:exon
so has part: feature:557978-558247:-1:exon
so has part: feature:557723-557859:-1:exon
so has part: feature:557485-557631:-1:exon
so has part: feature:555680-556330:-1:exon

XP_040998684.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:558914-559286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:558359-558496:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:557978-558247:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:557723-557859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:557485-557631:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:555680-556330:-1:exon

LOC121244562
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244562
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(563573..581160)
location: region:563573-581160:-1
so has part: feature:563573-581160:-1:exon
subclass of: SO_0000010

121244562
type: Gene
SIO_000068: ncbigene

position:563573:-1
position: 563573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581160:-1
position: 581160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:563573-581160:-1:exon

LOC121244562
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2249226
gene: LOC121244562
product: serine/threonine-protein kinase prpf4B-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XR_005936453.1
SIO_010081: LOC121244562
so part of: LOC121244562
location: complement(join(563573..563916,572701..572729,572827..572876,573478..573542,573938..574348,574482..574556,574685..574848,575014..575128,575259..575550,575694..575850,576630..576702,577237..577305,577572..577771,578566..578747,578838..580153,580723..581160))
location: region:563573-581160:-1
so has part: feature:580723-581160:-1:exon
so has part: feature:578838-580153:-1:exon
so has part: feature:578566-578747:-1:exon
so has part: feature:577572-577771:-1:exon
so has part: feature:577237-577305:-1:exon
so has part: feature:576630-576702:-1:exon
so has part: feature:575694-575850:-1:exon
so has part: feature:575259-575550:-1:exon
so has part: feature:575014-575128:-1:exon
so has part: feature:574685-574848:-1:exon
so has part: feature:574482-574556:-1:exon
so has part: feature:573938-574348:-1:exon
so has part: feature:573478-573542:-1:exon
so has part: feature:572827-572876:-1:exon
so has part: feature:572701-572729:-1:exon
so has part: feature:563573-563916:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:580723-581160:-1:exon

position:580723:-1
position: 580723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:578838-580153:-1:exon

position:578838:-1
position: 578838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580153:-1
position: 580153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:578566-578747:-1:exon

position:578566:-1
position: 578566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578747:-1
position: 578747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:577572-577771:-1:exon

position:577572:-1
position: 577572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577771:-1
position: 577771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:577237-577305:-1:exon

position:577237:-1
position: 577237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577305:-1
position: 577305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:576630-576702:-1:exon

position:576630:-1
position: 576630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576702:-1
position: 576702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:575694-575850:-1:exon

position:575694:-1
position: 575694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575850:-1
position: 575850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:575259-575550:-1:exon

position:575259:-1
position: 575259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575550:-1
position: 575550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:575014-575128:-1:exon

position:575014:-1
position: 575014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575128:-1
position: 575128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:574685-574848:-1:exon

position:574685:-1
position: 574685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574848:-1
position: 574848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:574482-574556:-1:exon

position:574482:-1
position: 574482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574556:-1
position: 574556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:573938-574348:-1:exon

position:573938:-1
position: 573938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574348:-1
position: 574348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:573478-573542:-1:exon

position:573478:-1
position: 573478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573542:-1
position: 573542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:572827-572876:-1:exon

position:572827:-1
position: 572827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572876:-1
position: 572876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:572701-572729:-1:exon

position:572701:-1
position: 572701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572729:-1
position: 572729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:563573-563916:-1:exon

position:563916:-1
position: 563916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121244562
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2249226
gene: LOC121244562
product: serine/threonine-protein kinase prpf4B-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 96 samples with support for all annotated introns
transcript id: XR_005936454.1
SIO_010081: LOC121244562
so part of: LOC121244562
location: complement(join(573479..573542,573938..574038,574145..574348,574482..574556,574685..574848,575014..575128,575259..575550,575694..575850,576630..576702,577237..577305,577572..577771,578566..578747,578838..580153,580723..581160))
location: region:573479-581160:-1
so has part: feature:580723-581160:-1:exon
so has part: feature:578838-580153:-1:exon
so has part: feature:578566-578747:-1:exon
so has part: feature:577572-577771:-1:exon
so has part: feature:577237-577305:-1:exon
so has part: feature:576630-576702:-1:exon
so has part: feature:575694-575850:-1:exon
so has part: feature:575259-575550:-1:exon
so has part: feature:575014-575128:-1:exon
so has part: feature:574685-574848:-1:exon
so has part: feature:574482-574556:-1:exon
so has part: feature:574145-574348:-1:exon
so has part: feature:573938-574038:-1:exon
so has part: feature:573479-573542:-1:exon

position:573479:-1
position: 573479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580723-581160:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:578838-580153:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:578566-578747:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577572-577771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:577237-577305:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576630-576702:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:575694-575850:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:575259-575550:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:575014-575128:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:574685-574848:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:574482-574556:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:574145-574348:-1:exon

position:574145:-1
position: 574145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:573938-574038:-1:exon

position:574038:-1
position: 574038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:573479-573542:-1:exon

LOC121244562
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244562
product: serine/threonine-protein kinase prpf4B-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 102 samples with support for all annotated introns
transcript id: XM_041142689.1
SIO_010081: LOC121244562
subclass of: SO_0000673
so part of: LOC121244562
location: complement(join(573638..574038,574145..574348,574482..574556,574685..574848,575014..575128,575259..575550,575694..575850,576630..576702,577237..577305,577572..577771,578566..578747,578838..580153,580723..581160))
location: region:573638-581160:-1
so has part: feature:580723-581160:-1:exon
so has part: feature:578838-580153:-1:exon
so has part: feature:578566-578747:-1:exon
so has part: feature:577572-577771:-1:exon
so has part: feature:577237-577305:-1:exon
so has part: feature:576630-576702:-1:exon
so has part: feature:575694-575850:-1:exon
so has part: feature:575259-575550:-1:exon
so has part: feature:575014-575128:-1:exon
so has part: feature:574685-574848:-1:exon
so has part: feature:574482-574556:-1:exon
so has part: feature:574145-574348:-1:exon
so has part: feature:573638-574038:-1:exon

position:573638:-1
position: 573638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580723-581160:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:578838-580153:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:578566-578747:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577572-577771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:577237-577305:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576630-576702:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:575694-575850:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:575259-575550:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:575014-575128:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:574685-574848:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:574482-574556:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:574145-574348:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:573638-574038:-1:exon

LOC121244562
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244562
product: serine/threonine-protein kinase prpf4B-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 long SRA read, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 106 samples with support for all annotated introns
transcript id: XM_041142688.1
SIO_010081: LOC121244562
subclass of: SO_0000673
so part of: LOC121244562
location: complement(join(573638..574348,574482..574556,574685..574848,575014..575128,575259..575550,575694..575850,576630..576702,577237..577305,577572..577771,578566..578747,578838..580153,580723..581160))
location: region:573638-581160:-1
so has part: feature:580723-581160:-1:exon
so has part: feature:578838-580153:-1:exon
so has part: feature:578566-578747:-1:exon
so has part: feature:577572-577771:-1:exon
so has part: feature:577237-577305:-1:exon
so has part: feature:576630-576702:-1:exon
so has part: feature:575694-575850:-1:exon
so has part: feature:575259-575550:-1:exon
so has part: feature:575014-575128:-1:exon
so has part: feature:574685-574848:-1:exon
so has part: feature:574482-574556:-1:exon
so has part: feature:573638-574348:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:580723-581160:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:578838-580153:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:578566-578747:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577572-577771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:577237-577305:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576630-576702:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:575694-575850:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:575259-575550:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:575014-575128:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:574685-574848:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:574482-574556:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:573638-574348:-1:exon

LOC121244562
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244562
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase prpf4B-like
translation: MASESHDSRRKHRRSSSSEDDAERSSKRHKHHHHHRHRHRSKKRDAEDIIAAPPPPVTIRNSRPDDDVEEGEILEDEGFGFGGGEHEIAERKPQSDDESREIVAVGVTAQSDQQNSGSAEHGSYDAEARIHEGEILGKKGRSLKTLREDKSKDDFLTNSNLDKEDRAYSQSGVDTGIENELGSPRTLNVEPQNELAYRVTPEGYGNGDLGFKAIKDNKMWQSESWPSSKGSGKEKTHYDDEKVEVYGSKLSNQGKSSSQSAGDTRSRSRSIDHARERSRSLSIREEEAHSKKQHYYGRDASLYADRSKFMYDSDDERMVRLRKDGRHYRRDVEREHITSSNKYIGEERLQSQSTWERERSKDREMARELRKEKERNRGVEMDKAQRREKERERSRERDRKRGMERYRSKEREVDKDRQDMERDKIKDNQVDRDGEREKERDRSRASERERDRDRDRERERDRDKIWRERERDKIWRERDNEREKRNDRNRNRDRGIMIDREKYEYLVDGDRHKNSRHSRYDGKDYHHDRTRKTDSAKVPCSRSDLLEGNREKLQRDDDEQGDYEEGTTLQFAEQEEEDLNRIKEESRRRRQAILEKYKSQQLQQPNQPRSEDTEKDKEPAHDSDQSVAANDVITDTGDGRSDGFDIYVAEPSFSVGKSPPQNGHADLEKTSSAGGLGEGSPKSERSGDKFCDDIFGETPTGVRRLDKVDGLRFERSGLNDNWDDAEGYYGYRFGEILDGRYEVIAAHGKGVFSTVVRAKNLKAGNGEPEEVAIKIIRSNDTMYKAGMEELVILKKLVGADPDDKRHCVRFISSFKYRNHLCLVFESLHMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEITPYLVSRFYRAPEIILGMPYDHPLDIWSVGCCLYEVYTGKVLFPGATNNDMLRLHMELKGPFPKKMLRKGAFSDQHFDQDLSFHATEEDPVTKKAIKRMILNIKPKDISSIITGSPGEDPKMLANFKDLLEKIFVLDPDKRMTVSQALSHPFITGK
SIO_010081: LOC121244562
subclass of: SO_0000673
so part of: LOC121244562
location: complement(join(574160..574348,574482..574556,574685..574848,575014..575128,575259..575550,575694..575850,576630..576702,577237..577305,577572..577771,578566..578747,578838..580153,580723..581070))
location: region:574160-581070:-1
so has part: feature:580723-581070:-1:exon
so has part: feature:578838-580153:-1:exon
so has part: feature:578566-578747:-1:exon
so has part: feature:577572-577771:-1:exon
so has part: feature:577237-577305:-1:exon
so has part: feature:576630-576702:-1:exon
so has part: feature:575694-575850:-1:exon
so has part: feature:575259-575550:-1:exon
so has part: feature:575014-575128:-1:exon
so has part: feature:574685-574848:-1:exon
so has part: feature:574482-574556:-1:exon
so has part: feature:574160-574348:-1:exon

XP_040998622.1
type: Protein
SIO_000068: ncbiprotein

position:574160:-1
position: 574160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581070:-1
position: 581070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580723-581070:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:578838-580153:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:578566-578747:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577572-577771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:577237-577305:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576630-576702:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:575694-575850:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:575259-575550:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:575014-575128:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:574685-574848:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:574482-574556:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:574160-574348:-1:exon

LOC121244562
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244562
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase prpf4B-like
translation: MASESHDSRRKHRRSSSSEDDAERSSKRHKHHHHHRHRHRSKKRDAEDIIAAPPPPVTIRNSRPDDDVEEGEILEDEGFGFGGGEHEIAERKPQSDDESREIVAVGVTAQSDQQNSGSAEHGSYDAEARIHEGEILGKKGRSLKTLREDKSKDDFLTNSNLDKEDRAYSQSGVDTGIENELGSPRTLNVEPQNELAYRVTPEGYGNGDLGFKAIKDNKMWQSESWPSSKGSGKEKTHYDDEKVEVYGSKLSNQGKSSSQSAGDTRSRSRSIDHARERSRSLSIREEEAHSKKQHYYGRDASLYADRSKFMYDSDDERMVRLRKDGRHYRRDVEREHITSSNKYIGEERLQSQSTWERERSKDREMARELRKEKERNRGVEMDKAQRREKERERSRERDRKRGMERYRSKEREVDKDRQDMERDKIKDNQVDRDGEREKERDRSRASERERDRDRDRERERDRDKIWRERERDKIWRERDNEREKRNDRNRNRDRGIMIDREKYEYLVDGDRHKNSRHSRYDGKDYHHDRTRKTDSAKVPCSRSDLLEGNREKLQRDDDEQGDYEEGTTLQFAEQEEEDLNRIKEESRRRRQAILEKYKSQQLQQPNQPRSEDTEKDKEPAHDSDQSVAANDVITDTGDGRSDGFDIYVAEPSFSVGKSPPQNGHADLEKTSSAGGLGEGSPKSERSGDKFCDDIFGETPTGVRRLDKVDGLRFERSGLNDNWDDAEGYYGYRFGEILDGRYEVIAAHGKGVFSTVVRAKNLKAGNGEPEEVAIKIIRSNDTMYKAGMEELVILKKLVGADPDDKRHCVRFISSFKYRNHLCLVFESLHMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEITPYLVSRFYRAPEIILGMPYDHPLDIWSVGCCLYEVYTGKVLFPGATNNDMLRLHMELKGPFPKKMLRKGAFSDQHFDQDLSFHATEEDPVTKKAIKRMILNIKPKDISSIITGSPGEDPKMLANFKDLLEKIFVLDPDKRMTVSQALSHPFITGK
SIO_010081: LOC121244562
subclass of: SO_0000673
so part of: LOC121244562
location: complement(join(574160..574348,574482..574556,574685..574848,575014..575128,575259..575550,575694..575850,576630..576702,577237..577305,577572..577771,578566..578747,578838..580153,580723..581070))
location: region:574160-581070:-1
so has part: feature:580723-581070:-1:exon
so has part: feature:578838-580153:-1:exon
so has part: feature:578566-578747:-1:exon
so has part: feature:577572-577771:-1:exon
so has part: feature:577237-577305:-1:exon
so has part: feature:576630-576702:-1:exon
so has part: feature:575694-575850:-1:exon
so has part: feature:575259-575550:-1:exon
so has part: feature:575014-575128:-1:exon
so has part: feature:574685-574848:-1:exon
so has part: feature:574482-574556:-1:exon
so has part: feature:574160-574348:-1:exon

XP_040998623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:580723-581070:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:578838-580153:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:578566-578747:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577572-577771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:577237-577305:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576630-576702:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:575694-575850:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:575259-575550:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:575014-575128:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:574685-574848:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:574482-574556:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:574160-574348:-1:exon

LOC121244565
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244565
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 597895..602997
location: region:597895-602997:1
so has part: feature:597895-602997:1:exon
subclass of: SO_0000010

121244565
type: Gene
SIO_000068: ncbigene

position:597895:1
position: 597895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602997:1
position: 602997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597895-602997:1:exon

LOC121244565
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244565
product: protein WHAT'S THIS FACTOR 9, mitochondrial, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_041142690.1
SIO_010081: LOC121244565
subclass of: SO_0000673
so part of: LOC121244565
location: join(597895..599712,602502..602997)
location: region:597895-602997:1
so has part: feature:597895-599712:1:exon
so has part: feature:602502-602997:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:597895-599712:1:exon

position:599712:1
position: 599712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:602502-602997:1:exon

position:602502:1
position: 602502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244565
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2249226
gene: LOC121244565
product: protein WHAT'S THIS FACTOR 9, mitochondrial, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005936456.1
SIO_010081: LOC121244565
so part of: LOC121244565
location: join(597895..599712,602502..602738,602926..602997)
location: region:597895-602997:1
so has part: feature:597895-599712:1:exon
so has part: feature:602502-602738:1:exon
so has part: feature:602926-602997:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:597895-599712:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:602502-602738:1:exon

position:602738:1
position: 602738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:602926-602997:1:exon

position:602926:1
position: 602926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244565
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2249226
gene: LOC121244565
product: protein WHAT'S THIS FACTOR 9, mitochondrial, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_005936455.1
SIO_010081: LOC121244565
so part of: LOC121244565
location: join(597895..599758,599793..600820)
location: region:597895-600820:1
so has part: feature:597895-599758:1:exon
so has part: feature:599793-600820:1:exon

position:600820:1
position: 600820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597895-599758:1:exon

position:599758:1
position: 599758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:599793-600820:1:exon

position:599793:1
position: 599793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244565
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein WHAT'S THIS FACTOR 9, mitochondrial
translation: MQFIFRSLPERFSLSHFDRRRTFVDTPFKWARDRGLDHVVEREKNLRPLLNLKNFIKSEPSKSVPVSIITQNRDSLQIPVRSIDFIRKYPSIFEEFLPGGIGIHPHIRLTPEVLNLDAEEQLVYQSETYKKQAADRVLKLLMISRANKIPLSIVERLKWDLGLPRDYEKTIFPEFPDYFQIVGDRDSSKGSEDRRVLELVCWSNELATSVMEKMATKGKLDYEKGMAIAFPLQFSRGFEMDKKLKKWEDEWQKLPYISPYENASHLLPKSDESDKWAVAVLHELLHILVSKKTEKDNILHLGEYLGLRSRFKRALLHHPGIFYLSSKIGTYTVVLKEGYKRGLLVENHPLMIMRNRYIHLMNTVKEDSKQINIPAGNSRKKKPTVHDEKGKEDEENDDKSGEDDEQELDDSSDAEVEDASEHEYDNDDRDEEDENESRRGFQKHVVDNRGKKGRKTILGEKGPWRKSESKREVGKQPVKTREKAPSKVHRRAKMHGGNNVRGSSRERSILPKSRERSLPDKRTFTQ
SIO_010081: LOC121244565
subclass of: SO_0000673
so part of: LOC121244565
location: 598096..599676
location: region:598096-599676:1
so has part: feature:598096-599676:1:exon

XP_040998624.1
type: Protein
SIO_000068: ncbiprotein

position:598096:1
position: 598096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599676:1
position: 599676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598096-599676:1:exon

LOC121244776
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244776
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 603689..609181
location: region:603689-609181:1
so has part: feature:603689-609181:1:exon
subclass of: SO_0000010

121244776
type: Gene
SIO_000068: ncbigene

position:603689:1
position: 603689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609181:1
position: 609181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603689-609181:1:exon

LOC121244776
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244776
product: probable magnesium transporter NIPA6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_041142986.1
SIO_010081: LOC121244776
subclass of: SO_0000673
so part of: LOC121244776
location: join(603689..603995,604424..604480,604578..604668,604880..605040,605191..605241,605458..605595,605701..606108)
location: region:603689-606108:1
so has part: feature:603689-603995:1:exon
so has part: feature:604424-604480:1:exon
so has part: feature:604578-604668:1:exon
so has part: feature:604880-605040:1:exon
so has part: feature:605191-605241:1:exon
so has part: feature:605458-605595:1:exon
so has part: feature:605701-606108:1:exon

position:606108:1
position: 606108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603689-603995:1:exon

position:603995:1
position: 603995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:604424-604480:1:exon

position:604424:1
position: 604424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604480:1
position: 604480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:604578-604668:1:exon

position:604578:1
position: 604578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604668:1
position: 604668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:604880-605040:1:exon

position:604880:1
position: 604880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605040:1
position: 605040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:605191-605241:1:exon

position:605191:1
position: 605191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605241:1
position: 605241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:605458-605595:1:exon

position:605458:1
position: 605458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605595:1
position: 605595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:605701-606108:1:exon

position:605701:1
position: 605701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244776
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244776
product: probable magnesium transporter NIPA6, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XM_041142987.1
SIO_010081: LOC121244776
subclass of: SO_0000673
so part of: LOC121244776
location: join(603704..603995,604424..604480,604578..604668,604880..605040,605114..605241,605458..605595,605701..605932)
location: region:603704-605932:1
so has part: feature:603704-603995:1:exon
so has part: feature:604424-604480:1:exon
so has part: feature:604578-604668:1:exon
so has part: feature:604880-605040:1:exon
so has part: feature:605114-605241:1:exon
so has part: feature:605458-605595:1:exon
so has part: feature:605701-605932:1:exon

position:603704:1
position: 603704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605932:1
position: 605932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603704-603995:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:604424-604480:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:604578-604668:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:604880-605040:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:605114-605241:1:exon

position:605114:1
position: 605114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:605458-605595:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:605701-605932:1:exon

LOC121244776
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2249226
gene: LOC121244776
product: probable magnesium transporter NIPA6, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 97 samples with support for all annotated introns
transcript id: XR_005936492.1
SIO_010081: LOC121244776
so part of: LOC121244776
location: join(603708..603995,604424..604480,604578..604668,604880..605040,605114..605241,605458..605595,606851..606979,607059..607114)
location: region:603708-607114:1
so has part: feature:603708-603995:1:exon
so has part: feature:604424-604480:1:exon
so has part: feature:604578-604668:1:exon
so has part: feature:604880-605040:1:exon
so has part: feature:605114-605241:1:exon
so has part: feature:605458-605595:1:exon
so has part: feature:606851-606979:1:exon
so has part: feature:607059-607114:1:exon

position:603708:1
position: 603708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607114:1
position: 607114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603708-603995:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:604424-604480:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:604578-604668:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:604880-605040:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:605114-605241:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:605458-605595:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:606851-606979:1:exon

position:606851:1
position: 606851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606979:1
position: 606979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:607059-607114:1:exon

position:607059:1
position: 607059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244776
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244776
product: probable magnesium transporter NIPA6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 90 samples with support for all annotated introns
transcript id: XM_041142985.1
SIO_010081: LOC121244776
subclass of: SO_0000673
so part of: LOC121244776
location: join(603711..603995,604424..604480,604578..604668,604880..605040,605132..605241,605458..605595,606887..606979,607059..607176,608660..609181)
location: region:603711-609181:1
so has part: feature:603711-603995:1:exon
so has part: feature:604424-604480:1:exon
so has part: feature:604578-604668:1:exon
so has part: feature:604880-605040:1:exon
so has part: feature:605132-605241:1:exon
so has part: feature:605458-605595:1:exon
so has part: feature:606887-606979:1:exon
so has part: feature:607059-607176:1:exon
so has part: feature:608660-609181:1:exon

position:603711:1
position: 603711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603711-603995:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:604424-604480:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:604578-604668:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:604880-605040:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:605132-605241:1:exon

position:605132:1
position: 605132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:605458-605595:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:606887-606979:1:exon

position:606887:1
position: 606887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:607059-607176:1:exon

position:607176:1
position: 607176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:608660-609181:1:exon

position:608660:1
position: 608660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244776
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244776
product: probable magnesium transporter NIPA6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_041142984.1
SIO_010081: LOC121244776
subclass of: SO_0000673
so part of: LOC121244776
location: join(603713..603995,604424..604480,604578..604668,604880..605040,605114..605241,605458..605595,606887..606979,607059..607176,608660..609181)
location: region:603713-609181:1
so has part: feature:603713-603995:1:exon
so has part: feature:604424-604480:1:exon
so has part: feature:604578-604668:1:exon
so has part: feature:604880-605040:1:exon
so has part: feature:605114-605241:1:exon
so has part: feature:605458-605595:1:exon
so has part: feature:606887-606979:1:exon
so has part: feature:607059-607176:1:exon
so has part: feature:608660-609181:1:exon

position:603713:1
position: 603713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603713-603995:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:604424-604480:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:604578-604668:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:604880-605040:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:605114-605241:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:605458-605595:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:606887-606979:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:607059-607176:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:608660-609181:1:exon

LOC121244776
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244776
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable magnesium transporter NIPA6 isoform X1
translation: MAASLVIEASVSASFADNLKGFILALVSSAFIGSSFIIKKLGLQRAGASGPRASSGGYGYLKEPFWWVGMVTMIVGELANFVAYMFAPAVLVTPLGALSIIVSAVLAHFFLKEKLRKMGIVGCVLCIVGSTLIVLHAPSELSLSSVEEIWELATQPAFLLYTASAIAVVLVLILYCEPRFGQTNILVYIGVCSIIGSLTVMSIKAVGIAIKLTLEGSSQAGSFQTWVFVMVAITCIITQLNYLNKALDTFNTTVVSPIYYALFTSLTIFASAIMFKDWSGQSASSIVSVLCGFITVLSGTLVLHSTRDRDPTSVADIYASLSPQGSWFVHENGEIWKQNADDGLCPDFDAIIKQDHFN
SIO_010081: LOC121244776
subclass of: SO_0000673
so part of: LOC121244776
location: join(603836..603995,604424..604480,604578..604668,604880..605040,605114..605241,605458..605595,606887..606979,607059..607176,608660..608790)
location: region:603836-608790:1
so has part: feature:603836-603995:1:exon
so has part: feature:604424-604480:1:exon
so has part: feature:604578-604668:1:exon
so has part: feature:604880-605040:1:exon
so has part: feature:605114-605241:1:exon
so has part: feature:605458-605595:1:exon
so has part: feature:606887-606979:1:exon
so has part: feature:607059-607176:1:exon
so has part: feature:608660-608790:1:exon

XP_040998918.1
type: Protein
SIO_000068: ncbiprotein

position:603836:1
position: 603836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608790:1
position: 608790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603836-603995:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:604424-604480:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:604578-604668:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:604880-605040:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:605114-605241:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:605458-605595:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:606887-606979:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:607059-607176:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:608660-608790:1:exon

LOC121244776
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244776
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable magnesium transporter NIPA6 isoform X2
translation: MAASLVIEASVSASFADNLKGFILALVSSAFIGSSFIIKKLGLQRAGASGPRASSGGYGYLKEPFWWVGMVTMIVGELANFVAYMFAPAVLVTPLGALSIIVSAVLAHFFLKEKLRKMGIVGCVLCIVGSTLIVLHAPSELSLSSVEEIWELATQPASAIAVVLVLILYCEPRFGQTNILVYIGVCSIIGSLTVMSIKAVGIAIKLTLEGSSQAGSFQTWVFVMVAITCIITQLNYLNKALDTFNTTVVSPIYYALFTSLTIFASAIMFKDWSGQSASSIVSVLCGFITVLSGTLVLHSTRDRDPTSVADIYASLSPQGSWFVHENGEIWKQNADDGLCPDFDAIIKQDHFN
SIO_010081: LOC121244776
subclass of: SO_0000673
so part of: LOC121244776
location: join(603836..603995,604424..604480,604578..604668,604880..605040,605132..605241,605458..605595,606887..606979,607059..607176,608660..608790)
location: region:603836-608790:1
so has part: feature:603836-603995:1:exon
so has part: feature:604424-604480:1:exon
so has part: feature:604578-604668:1:exon
so has part: feature:604880-605040:1:exon
so has part: feature:605132-605241:1:exon
so has part: feature:605458-605595:1:exon
so has part: feature:606887-606979:1:exon
so has part: feature:607059-607176:1:exon
so has part: feature:608660-608790:1:exon

XP_040998919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:603836-603995:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:604424-604480:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:604578-604668:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:604880-605040:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:605132-605241:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:605458-605595:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:606887-606979:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:607059-607176:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:608660-608790:1:exon

LOC121244776
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244776
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121244776 isoform X3
translation: MAASLVIEASVSASFADNLKGFILALVSSAFIGSSFIIKKLGLQRAGASGPRASSGGYGYLKEPFWWVGMVTMIVGELANFVAYMFAPAVLVTPLGALSIIVSAVLAHFFLKEKLRKMGIVGCVLCIVGSTLIVLHAPSELSLSSVEEIWELATQPDKHTGLYWRMFHNWIIDGYEYQSCRHCYKTHIGGFKPGRKLPNMGFCNGCNYVYYHSAELFEQGCTCERDEVVLQRGACLYIYIYIYIFFFFLVHIKNVEKILTLRREISESGAFQFVGGQCVDSHSACIVPSAFLLRSVNSSSDI
SIO_010081: LOC121244776
subclass of: SO_0000673
so part of: LOC121244776
location: join(603836..603995,604424..604480,604578..604668,604880..605040,605191..605241,605458..605595,605701..605951)
location: region:603836-605951:1
so has part: feature:603836-603995:1:exon
so has part: feature:604424-604480:1:exon
so has part: feature:604578-604668:1:exon
so has part: feature:604880-605040:1:exon
so has part: feature:605191-605241:1:exon
so has part: feature:605458-605595:1:exon
so has part: feature:605701-605951:1:exon

XP_040998920.1
type: Protein
SIO_000068: ncbiprotein

position:605951:1
position: 605951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603836-603995:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:604424-604480:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:604578-604668:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:604880-605040:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:605191-605241:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:605458-605595:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:605701-605951:1:exon

LOC121244776
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244776
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable magnesium transporter NIPA6 isoform X4
translation: MAASLVIEASVSASFADNLKGFILALVSSAFIGSSFIIKKLGLQRAGASGPRASSGGYGYLKEPFWWVGMVTMIVGELANFVAYMFAPAVLVTPLGALSIIVSAVLAHFFLKEKLRKMGIVGCVLCIVGSTLIVLHAPSELSLSSVEEIWELATQPAFLLYTASAIAVVLVLILYCEPRFGQTNILVYIGVCSIIGSLTVMSIKAVGIAIKLTLEGSSQAGSFQTWVFVMVAITCIITQLNYLNKGAPVNVMKLCYRGVPVCIYIYIYIYFFFFWCI
SIO_010081: LOC121244776
subclass of: SO_0000673
so part of: LOC121244776
location: join(603836..603995,604424..604480,604578..604668,604880..605040,605114..605241,605458..605595,605701..605799)
location: region:603836-605799:1
so has part: feature:603836-603995:1:exon
so has part: feature:604424-604480:1:exon
so has part: feature:604578-604668:1:exon
so has part: feature:604880-605040:1:exon
so has part: feature:605114-605241:1:exon
so has part: feature:605458-605595:1:exon
so has part: feature:605701-605799:1:exon

XP_040998921.1
type: Protein
SIO_000068: ncbiprotein

position:605799:1
position: 605799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603836-603995:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:604424-604480:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:604578-604668:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:604880-605040:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:605114-605241:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:605458-605595:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:605701-605799:1:exon

LOC121244910
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244910
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 609946..612773
location: region:609946-612773:1
so has part: feature:609946-612773:1:exon
subclass of: SO_0000010

121244910
type: Gene
SIO_000068: ncbigene

position:609946:1
position: 609946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:612773:1
position: 612773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609946-612773:1:exon

LOC121244910
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244910
product: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041143153.1
SIO_010081: LOC121244910
subclass of: SO_0000673
so part of: LOC121244910
location: 609946..612773
location: region:609946-612773:1
so has part: feature:609946-612773:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:609946-612773:1:exon

LOC121244910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244910
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300
translation: MTLQIQSLLLVQLLSILILFLPTILLAVTTISPGSTLYASNTSQIWSSPNNTFSFGFIPLNPPNSPSFLAAIVYSGGIPIWSAGTTPVDSAAYFQFHPTAGDLRLVNGSGHTVWNSSTVGLGVSSASLDDHGNLVLMRNGAFPVWSSFDHPTDTIVPWQNFSTRNSLRNGLFSFGLLEYGNITLKWDDTTVYWSRRSGSSHGENLTSPSLGLLSNGTLSVFDRSIPGMAIIAYSNDHDEGSDMLRFLRLDNDGNLRIYSTARGSGTLIVRWVAVEDQCRVFGYCGDMGICSYNGTNPICTCPSENFEQVDPKDSRKGCQRKLKTEDCPGNLTMLVMEHTLFLTYPPQSIFAVEGSQVFFVGISACNSNCLVNPICDASTILSDGTGMCYYKIPGFITGYYNPALPSTSYVKVCSPAVQNPLPYVQKVVRKGDGRMQARAVSAVLLGSVLGWLALVHTLWWWWSSTKFGRLSGKHALLEYASCAPIQFSYRELQRLTKGFSENLGSGGFGAVYRGTLANRMVVAVKRLEEMEQQGERQFRMQVATISSTHHLNLVRLIGFCCEGRHRLLVYEFMQNKSLDTCLFQTGDEKLESKLLSWESRFNIALGIARGITYLHDECRDCTVHCNIKPENILLDENYTAKVSDFGLAKLDHHMHRTMTSVIGTRGYLAPEWLANLPLTTKSDVYSFGMILLEIVSGRRNFEVSAETNWKRFSLWAYEEFEKGNVNGVLDRRLLGNHHLEMEVDMEEVVRAIQVSFLCIQEQPSRRPRIGKVVQMLQGITRIDWPPVH
SIO_010081: LOC121244910
subclass of: SO_0000673
so part of: LOC121244910
location: 610176..612542
location: region:610176-612542:1
so has part: feature:610176-612542:1:exon

XP_040999087.1
type: Protein
SIO_000068: ncbiprotein

position:610176:1
position: 610176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:612542:1
position: 612542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:610176-612542:1:exon

LOC121244756
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244756
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(614906..615610)
location: region:614906-615610:-1
so has part: feature:614906-615610:-1:exon
subclass of: SO_0000010

121244756
type: Gene
SIO_000068: ncbigene

position:614906:-1
position: 614906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615610:-1
position: 615610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614906-615610:-1:exon

LOC121244756
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244756
product: E3 ubiquitin-protein ligase RNF12-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_041142962.1
SIO_010081: LOC121244756
subclass of: SO_0000673
so part of: LOC121244756
location: complement(614906..615610)
location: region:614906-615610:-1
so has part: feature:614906-615610:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:614906-615610:-1:exon

LOC121244756
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244756
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF12-like
translation: MAGSTNNVYLHLSEATAQSSEADLTVGRVEVRFADAGFQNLWRSIMNRDGVLDPFDYPMSPSPTSTFVIQVPAHLFPYPDQHSQYLQTEISSSLIDLIGPENPNRLNVARNIASFAMRHFEASAEASARGSRSGYSIVAEVRMLRSEVWFDEIFDAADRESAIEKLIEKGRLVASKLDDEDHELGTCGICIEDFSSSVRAELLRMDCSHIYHRDCIIPWLAKSNTCPTCRAKLY
SIO_010081: LOC121244756
subclass of: SO_0000673
so part of: LOC121244756
location: complement(614906..615610)
location: region:614906-615610:-1
so has part: feature:614906-615610:-1:exon

XP_040998896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:614906-615610:-1:exon

LOC121244331
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244331
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 642952..644719
location: region:642952-644719:1
so has part: feature:642952-644719:1:exon
subclass of: SO_0000011

121244331
type: Gene
SIO_000068: ncbigene

position:642952:1
position: 642952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644719:1
position: 644719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642952-644719:1:exon

LOC121244331
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2249226
nc RNA class: lncRNA
gene: LOC121244331
product: uncharacterized LOC121244331
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XR_005936392.1
SIO_010081: LOC121244331
subclass of: SO_0000673
so part of: LOC121244331
location: join(642952..643325,643417..644719)
location: region:642952-644719:1
so has part: feature:642952-643325:1:exon
so has part: feature:643417-644719:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:642952-643325:1:exon

position:643325:1
position: 643325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:643417-644719:1:exon

position:643417:1
position: 643417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244329
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(646112..654338)
location: region:646112-654338:-1
so has part: feature:646112-654338:-1:exon
subclass of: SO_0000010

121244329
type: Gene
SIO_000068: ncbigene

position:646112:-1
position: 646112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654338:-1
position: 654338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:646112-654338:-1:exon

LOC121244329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244329
product: somatic embryogenesis receptor kinase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 76 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 78 samples with support for all annotated introns
transcript id: XM_041142349.1
SIO_010081: LOC121244329
subclass of: SO_0000673
so part of: LOC121244329
location: complement(join(646112..646735,647228..647622,647893..648234,648894..649025,649795..649907,649993..650064,650257..650328,651424..651567,652234..652305,652839..652971,653818..653905,653973..654338))
location: region:646112-654338:-1
so has part: feature:653973-654338:-1:exon
so has part: feature:653818-653905:-1:exon
so has part: feature:652839-652971:-1:exon
so has part: feature:652234-652305:-1:exon
so has part: feature:651424-651567:-1:exon
so has part: feature:650257-650328:-1:exon
so has part: feature:649993-650064:-1:exon
so has part: feature:649795-649907:-1:exon
so has part: feature:648894-649025:-1:exon
so has part: feature:647893-648234:-1:exon
so has part: feature:647228-647622:-1:exon
so has part: feature:646112-646735:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:653973-654338:-1:exon

position:653973:-1
position: 653973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:653818-653905:-1:exon

position:653818:-1
position: 653818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653905:-1
position: 653905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:652839-652971:-1:exon

position:652839:-1
position: 652839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:652971:-1
position: 652971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:652234-652305:-1:exon

position:652234:-1
position: 652234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:652305:-1
position: 652305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:651424-651567:-1:exon

position:651424:-1
position: 651424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651567:-1
position: 651567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:650257-650328:-1:exon

position:650257:-1
position: 650257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:650328:-1
position: 650328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:649993-650064:-1:exon

position:649993:-1
position: 649993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:650064:-1
position: 650064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:649795-649907:-1:exon

position:649795:-1
position: 649795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:649907:-1
position: 649907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:648894-649025:-1:exon

position:648894:-1
position: 648894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:649025:-1
position: 649025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:647893-648234:-1:exon

position:647893:-1
position: 647893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648234:-1
position: 648234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:647228-647622:-1:exon

position:647228:-1
position: 647228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:647622:-1
position: 647622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:646112-646735:-1:exon

position:646735:-1
position: 646735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121244329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244329
product: somatic embryogenesis receptor kinase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 76 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 88 samples with support for all annotated introns
transcript id: XM_041142348.1
SIO_010081: LOC121244329
subclass of: SO_0000673
so part of: LOC121244329
location: complement(join(646112..646735,647228..647622,647893..648234,648894..649025,649795..649907,649993..650064,650257..650328,651424..651567,652234..652305,652839..652971,653818..654338))
location: region:646112-654338:-1
so has part: feature:653818-654338:-1:exon
so has part: feature:652839-652971:-1:exon
so has part: feature:652234-652305:-1:exon
so has part: feature:651424-651567:-1:exon
so has part: feature:650257-650328:-1:exon
so has part: feature:649993-650064:-1:exon
so has part: feature:649795-649907:-1:exon
so has part: feature:648894-649025:-1:exon
so has part: feature:647893-648234:-1:exon
so has part: feature:647228-647622:-1:exon
so has part: feature:646112-646735:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:653818-654338:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:652839-652971:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:652234-652305:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:651424-651567:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:650257-650328:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:649993-650064:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:649795-649907:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:648894-649025:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:647893-648234:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:647228-647622:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:646112-646735:-1:exon

LOC121244329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: somatic embryogenesis receptor kinase 1
translation: MEVKVIWVSVLLWLILVVRPLCLISANMEGDALHSLRISLSDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAALSGQLVPQLGLLRNLQYLELYSNNISGQIPSELGNLTSLVSLDLYLNSFTGPIPDTLGRLSKLRFLRLNNNSLTGPIPMSLTNISSLQVLDLSNNHLSGAVPDNGSFSLFTPISFANNQGLCGPVTGHPCPGSPPFSPPPPFVPPPPISVPGGNSATGAIAGGVAAGAALLFAAPAIAFAWWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQKNYIEAEVEQLIQVALLCTQGSPMDRPKMSDVVRMLEGDGLAERWDEWQKVEVLREEVELAPHPNSDWIVDSTENLHAVELSGPR
SIO_010081: LOC121244329
subclass of: SO_0000673
so part of: LOC121244329
location: complement(join(646421..646735,647228..647622,647893..648234,648894..649025,649795..649907,649993..650064,650257..650328,651424..651567,652234..652305,652839..652971,653818..653905))
location: region:646421-653905:-1
so has part: feature:653818-653905:-1:exon
so has part: feature:652839-652971:-1:exon
so has part: feature:652234-652305:-1:exon
so has part: feature:651424-651567:-1:exon
so has part: feature:650257-650328:-1:exon
so has part: feature:649993-650064:-1:exon
so has part: feature:649795-649907:-1:exon
so has part: feature:648894-649025:-1:exon
so has part: feature:647893-648234:-1:exon
so has part: feature:647228-647622:-1:exon
so has part: feature:646421-646735:-1:exon

XP_040998282.1
type: Protein
SIO_000068: ncbiprotein

position:646421:-1
position: 646421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:653818-653905:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:652839-652971:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:652234-652305:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:651424-651567:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:650257-650328:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:649993-650064:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:649795-649907:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:648894-649025:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:647893-648234:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:647228-647622:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:646421-646735:-1:exon

LOC121244329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: somatic embryogenesis receptor kinase 1
translation: MEVKVIWVSVLLWLILVVRPLCLISANMEGDALHSLRISLSDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAALSGQLVPQLGLLRNLQYLELYSNNISGQIPSELGNLTSLVSLDLYLNSFTGPIPDTLGRLSKLRFLRLNNNSLTGPIPMSLTNISSLQVLDLSNNHLSGAVPDNGSFSLFTPISFANNQGLCGPVTGHPCPGSPPFSPPPPFVPPPPISVPGGNSATGAIAGGVAAGAALLFAAPAIAFAWWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQKNYIEAEVEQLIQVALLCTQGSPMDRPKMSDVVRMLEGDGLAERWDEWQKVEVLREEVELAPHPNSDWIVDSTENLHAVELSGPR
SIO_010081: LOC121244329
subclass of: SO_0000673
so part of: LOC121244329
location: complement(join(646421..646735,647228..647622,647893..648234,648894..649025,649795..649907,649993..650064,650257..650328,651424..651567,652234..652305,652839..652971,653818..653905))
location: region:646421-653905:-1
so has part: feature:653818-653905:-1:exon
so has part: feature:652839-652971:-1:exon
so has part: feature:652234-652305:-1:exon
so has part: feature:651424-651567:-1:exon
so has part: feature:650257-650328:-1:exon
so has part: feature:649993-650064:-1:exon
so has part: feature:649795-649907:-1:exon
so has part: feature:648894-649025:-1:exon
so has part: feature:647893-648234:-1:exon
so has part: feature:647228-647622:-1:exon
so has part: feature:646421-646735:-1:exon

XP_040998283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:653818-653905:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:652839-652971:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:652234-652305:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:651424-651567:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:650257-650328:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:649993-650064:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:649795-649907:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:648894-649025:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:647893-648234:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:647228-647622:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:646421-646735:-1:exon

LOC121244757
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244757
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 664392..665122
location: region:664392-665122:1
so has part: feature:664392-665122:1:exon
subclass of: SO_0000010

121244757
type: Gene
SIO_000068: ncbigene

position:664392:1
position: 664392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665122:1
position: 665122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664392-665122:1:exon

LOC121244757
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244757
product: 18.1 kDa class I heat shock protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68 Proteins
transcript id: XM_041142963.1
SIO_010081: LOC121244757
subclass of: SO_0000673
so part of: LOC121244757
location: join(664392..664587,664851..665122)
location: region:664392-665122:1
so has part: feature:664392-664587:1:exon
so has part: feature:664851-665122:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:664392-664587:1:exon

position:664587:1
position: 664587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:664851-665122:1:exon

position:664851:1
position: 664851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244757
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244757
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 18.1 kDa class I heat shock protein-like
translation: MTSFIPWFGGRRDHPFSTDIWDPFSFGTSLGSQQSDRGDETSALANAQVDWRETDTAHEFRVDLPGVGKENVKVQVEDSNILQISGERVLEKEDKNDKWHRIERRRGSFVRRFRLPDNVNLNEITCKLENGVLTVQVPKKEPDQTAKNVRSIDVA
SIO_010081: LOC121244757
subclass of: SO_0000673
so part of: LOC121244757
location: join(664392..664587,664851..665122)
location: region:664392-665122:1
so has part: feature:664392-664587:1:exon
so has part: feature:664851-665122:1:exon

XP_040998897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:664392-664587:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:664851-665122:1:exon

LOC121243825
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121243825
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(665335..669810)
location: region:665335-669810:-1
so has part: feature:665335-669810:-1:exon
subclass of: SO_0000010

121243825
type: Gene
SIO_000068: ncbigene

position:665335:-1
position: 665335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669810:-1
position: 669810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:665335-669810:-1:exon

LOC121243825
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121243825
product: shikimate kinase 1, chloroplastic-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_041141891.1
SIO_010081: LOC121243825
subclass of: SO_0000673
so part of: LOC121243825
location: complement(join(665335..665630,665724..665788,665876..665954,666037..666166,666281..666363,667481..667568,667978..668050,668132..668186,668554..668612,669272..669518,669620..669810))
location: region:665335-669810:-1
so has part: feature:669620-669810:-1:exon
so has part: feature:669272-669518:-1:exon
so has part: feature:668554-668612:-1:exon
so has part: feature:668132-668186:-1:exon
so has part: feature:667978-668050:-1:exon
so has part: feature:667481-667568:-1:exon
so has part: feature:666281-666363:-1:exon
so has part: feature:666037-666166:-1:exon
so has part: feature:665876-665954:-1:exon
so has part: feature:665724-665788:-1:exon
so has part: feature:665335-665630:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:669620-669810:-1:exon

position:669620:-1
position: 669620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:669272-669518:-1:exon

position:669272:-1
position: 669272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669518:-1
position: 669518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:668554-668612:-1:exon

position:668554:-1
position: 668554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668612:-1
position: 668612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:668132-668186:-1:exon

position:668132:-1
position: 668132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668186:-1
position: 668186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:667978-668050:-1:exon

position:667978:-1
position: 667978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668050:-1
position: 668050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:667481-667568:-1:exon

position:667481:-1
position: 667481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667568:-1
position: 667568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:666281-666363:-1:exon

position:666281:-1
position: 666281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666363:-1
position: 666363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:666037-666166:-1:exon

position:666037:-1
position: 666037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666166:-1
position: 666166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:665876-665954:-1:exon

position:665876:-1
position: 665876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665954:-1
position: 665954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:665724-665788:-1:exon

position:665724:-1
position: 665724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665788:-1
position: 665788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:665335-665630:-1:exon

position:665630:-1
position: 665630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121243825
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121243825
product: shikimate kinase 1, chloroplastic-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_041141892.1
SIO_010081: LOC121243825
subclass of: SO_0000673
so part of: LOC121243825
location: complement(join(665335..665630,665724..665779,666037..666166,666281..666363,667481..667568,667978..668050,668132..668186,668554..668612,669272..669522,669620..669810))
location: region:665335-669810:-1
so has part: feature:669620-669810:-1:exon
so has part: feature:669272-669522:-1:exon
so has part: feature:668554-668612:-1:exon
so has part: feature:668132-668186:-1:exon
so has part: feature:667978-668050:-1:exon
so has part: feature:667481-667568:-1:exon
so has part: feature:666281-666363:-1:exon
so has part: feature:666037-666166:-1:exon
so has part: feature:665724-665779:-1:exon
so has part: feature:665335-665630:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:669620-669810:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:669272-669522:-1:exon

position:669522:-1
position: 669522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:668554-668612:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:668132-668186:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:667978-668050:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:667481-667568:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:666281-666363:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:666037-666166:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:665724-665779:-1:exon

position:665779:-1
position: 665779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:665335-665630:-1:exon

LOC121243825
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121243825
product: shikimate kinase 1, chloroplastic-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_041141890.1
SIO_010081: LOC121243825
subclass of: SO_0000673
so part of: LOC121243825
location: complement(join(665335..665630,665724..665788,665876..665954,666037..666166,666281..666363,667481..667568,667978..668050,668132..668186,668554..668612,669272..669522,669620..669810))
location: region:665335-669810:-1
so has part: feature:669620-669810:-1:exon
so has part: feature:669272-669522:-1:exon
so has part: feature:668554-668612:-1:exon
so has part: feature:668132-668186:-1:exon
so has part: feature:667978-668050:-1:exon
so has part: feature:667481-667568:-1:exon
so has part: feature:666281-666363:-1:exon
so has part: feature:666037-666166:-1:exon
so has part: feature:665876-665954:-1:exon
so has part: feature:665724-665788:-1:exon
so has part: feature:665335-665630:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:669620-669810:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:669272-669522:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:668554-668612:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:668132-668186:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:667978-668050:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:667481-667568:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:666281-666363:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:666037-666166:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:665876-665954:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:665724-665788:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:665335-665630:-1:exon

LOC121243825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121243825
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: shikimate kinase 1, chloroplastic-like isoform X1
translation: MIFEGMGATRGVAPRFSTLIIGSKSIGRKLNVAVVRLNQRDRKECITKKCDFRPNSACARQRLLDFQLSHSCNHSQAVTVLESGNFSSFDEDCLLKNKAQEVASYVNGRSIFLLGMMGSGKTTVGQVLSTALGYSFIDSDAYVEQAMGGTSVAQIFKHYGESFFRDHESEALRKLSSVPRQVVATGGGVVVRHINWKFMRQGISVFLDVPIDALAKRIAKVGTDSRPLLHFDSGDAYTKTFVELFTLTKKRSVAYEDADVTVSLLNLAANLHLDDMSDITPTAVATEALVQIGEFLQEENGRAPRVHP
SIO_010081: LOC121243825
subclass of: SO_0000673
so part of: LOC121243825
location: complement(join(665565..665630,665724..665788,665876..665954,666037..666166,666281..666363,667481..667568,667978..668050,668132..668186,668554..668612,669272..669500))
location: region:665565-669500:-1
so has part: feature:669272-669500:-1:exon
so has part: feature:668554-668612:-1:exon
so has part: feature:668132-668186:-1:exon
so has part: feature:667978-668050:-1:exon
so has part: feature:667481-667568:-1:exon
so has part: feature:666281-666363:-1:exon
so has part: feature:666037-666166:-1:exon
so has part: feature:665876-665954:-1:exon
so has part: feature:665724-665788:-1:exon
so has part: feature:665565-665630:-1:exon

XP_040997824.1
type: Protein
SIO_000068: ncbiprotein

position:665565:-1
position: 665565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669500:-1
position: 669500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:669272-669500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:668554-668612:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:668132-668186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:667978-668050:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:667481-667568:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:666281-666363:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:666037-666166:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:665876-665954:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:665724-665788:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:665565-665630:-1:exon

LOC121243825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121243825
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: shikimate kinase 1, chloroplastic-like isoform X1
translation: MIFEGMGATRGVAPRFSTLIIGSKSIGRKLNVAVVRLNQRDRKECITKKCDFRPNSACARQRLLDFQLSHSCNHSQAVTVLESGNFSSFDEDCLLKNKAQEVASYVNGRSIFLLGMMGSGKTTVGQVLSTALGYSFIDSDAYVEQAMGGTSVAQIFKHYGESFFRDHESEALRKLSSVPRQVVATGGGVVVRHINWKFMRQGISVFLDVPIDALAKRIAKVGTDSRPLLHFDSGDAYTKTFVELFTLTKKRSVAYEDADVTVSLLNLAANLHLDDMSDITPTAVATEALVQIGEFLQEENGRAPRVHP
SIO_010081: LOC121243825
subclass of: SO_0000673
so part of: LOC121243825
location: complement(join(665565..665630,665724..665788,665876..665954,666037..666166,666281..666363,667481..667568,667978..668050,668132..668186,668554..668612,669272..669500))
location: region:665565-669500:-1
so has part: feature:669272-669500:-1:exon
so has part: feature:668554-668612:-1:exon
so has part: feature:668132-668186:-1:exon
so has part: feature:667978-668050:-1:exon
so has part: feature:667481-667568:-1:exon
so has part: feature:666281-666363:-1:exon
so has part: feature:666037-666166:-1:exon
so has part: feature:665876-665954:-1:exon
so has part: feature:665724-665788:-1:exon
so has part: feature:665565-665630:-1:exon

XP_040997825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:669272-669500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:668554-668612:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:668132-668186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:667978-668050:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:667481-667568:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:666281-666363:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:666037-666166:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:665876-665954:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:665724-665788:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:665565-665630:-1:exon

LOC121243825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121243825
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: shikimate kinase 1, chloroplastic-like isoform X2
translation: MIFEGMGATRGVAPRFSTLIIGSKSIGRKLNVAVVRLNQRDRKECITKKCDFRPNSACARQRLLDFQLSHSCNHSQAVTVLESGNFSSFDEDCLLKNKAQEVASYVNGRSIFLLGMMGSGKTTVGQVLSTALGYSFIDSDAYVEQAMGGTSVAQIFKHYGESFFRDHESEALRKLSSVPRQVVATGGGVVVRHINWKFMRQGISVFLDVPIDALAKRIAKVGTDSRPLLHFDSGDAYTKLTCILMTCLISHQLP
SIO_010081: LOC121243825
subclass of: SO_0000673
so part of: LOC121243825
location: complement(join(665732..665779,666037..666166,666281..666363,667481..667568,667978..668050,668132..668186,668554..668612,669272..669500))
location: region:665732-669500:-1
so has part: feature:669272-669500:-1:exon
so has part: feature:668554-668612:-1:exon
so has part: feature:668132-668186:-1:exon
so has part: feature:667978-668050:-1:exon
so has part: feature:667481-667568:-1:exon
so has part: feature:666281-666363:-1:exon
so has part: feature:666037-666166:-1:exon
so has part: feature:665732-665779:-1:exon

XP_040997826.1
type: Protein
SIO_000068: ncbiprotein

position:665732:-1
position: 665732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:669272-669500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:668554-668612:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:668132-668186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:667978-668050:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:667481-667568:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:666281-666363:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:666037-666166:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:665732-665779:-1:exon

LOC121244046
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244046
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(671711..678877)
location: region:671711-678877:-1
so has part: feature:671711-678877:-1:exon
subclass of: SO_0000010

121244046
type: Gene
SIO_000068: ncbigene

position:671711:-1
position: 671711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678877:-1
position: 678877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:671711-678877:-1:exon

LOC121244046
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244046
product: cleavage stimulating factor 64-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 89 samples with support for all annotated introns
transcript id: XM_041142090.1
SIO_010081: LOC121244046
subclass of: SO_0000673
so part of: LOC121244046
location: complement(join(671711..672172,673655..673975,674347..674871,674962..674997,676052..676129,676222..676337,676553..676586,676680..676854,678101..678179,678471..678877))
location: region:671711-678877:-1
so has part: feature:678471-678877:-1:exon
so has part: feature:678101-678179:-1:exon
so has part: feature:676680-676854:-1:exon
so has part: feature:676553-676586:-1:exon
so has part: feature:676222-676337:-1:exon
so has part: feature:676052-676129:-1:exon
so has part: feature:674962-674997:-1:exon
so has part: feature:674347-674871:-1:exon
so has part: feature:673655-673975:-1:exon
so has part: feature:671711-672172:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:678471-678877:-1:exon

position:678471:-1
position: 678471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:678101-678179:-1:exon

position:678101:-1
position: 678101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678179:-1
position: 678179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:676680-676854:-1:exon

position:676680:-1
position: 676680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676854:-1
position: 676854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:676553-676586:-1:exon

position:676553:-1
position: 676553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676586:-1
position: 676586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:676222-676337:-1:exon

position:676222:-1
position: 676222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676337:-1
position: 676337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:676052-676129:-1:exon

position:676052:-1
position: 676052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676129:-1
position: 676129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:674962-674997:-1:exon

position:674962:-1
position: 674962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674997:-1
position: 674997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:674347-674871:-1:exon

position:674347:-1
position: 674347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674871:-1
position: 674871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:673655-673975:-1:exon

position:673655:-1
position: 673655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673975:-1
position: 673975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:671711-672172:-1:exon

position:672172:-1
position: 672172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121244046
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244046
product: cleavage stimulating factor 64-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_041142089.1
SIO_010081: LOC121244046
subclass of: SO_0000673
so part of: LOC121244046
location: complement(join(671711..672172,673655..673975,674347..674871,674962..674997,676052..676129,676222..676439,676553..676586,676680..676854,678101..678179,678471..678875))
location: region:671711-678875:-1
so has part: feature:678471-678875:-1:exon
so has part: feature:678101-678179:-1:exon
so has part: feature:676680-676854:-1:exon
so has part: feature:676553-676586:-1:exon
so has part: feature:676222-676439:-1:exon
so has part: feature:676052-676129:-1:exon
so has part: feature:674962-674997:-1:exon
so has part: feature:674347-674871:-1:exon
so has part: feature:673655-673975:-1:exon
so has part: feature:671711-672172:-1:exon

position:678875:-1
position: 678875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:678471-678875:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:678101-678179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:676680-676854:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:676553-676586:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:676222-676439:-1:exon

position:676439:-1
position: 676439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:676052-676129:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:674962-674997:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:674347-674871:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:673655-673975:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:671711-672172:-1:exon

LOC121244046
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244046
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulating factor 64-like isoform X2
translation: MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGSDRNREQGRGGPGLAANVGALGGAQAGIQSALANDPLTLRLAKMSRSQLNGIISELKVMATQNKELARQLLIARPQLPKALFQAQIMLGMVTPQVLQMPNIRQTSGLATQPPLHDGQQGQPLAVQTLPRPPAPAQNKMQSGLMAKVQDNQVAALPQNPVVLHQFSALPQPQSQLPQHANNHGAQQATVPLQSAVSTLTAALPQSLGSLSSRSQVQAANSSSPNHQMQPSLLQHSGQVGAANAALFQMVNPNATIKPSLLPRPPLSDAGFQPGPSVSSVTSLAIKKDAEILAQVPDNGTQGLRSNAFSNAPSGSMFRDSLEPVNRPQKLMKMDDGRRTSFSAGSLNVTNTNAPRPSQVSGAGSLPVNPVPKTEGQISQSQLPPDVESVLLQQVLNLTPEQLSLLPPEQQQQVLQLQQVLRRDQIQLS
SIO_010081: LOC121244046
subclass of: SO_0000673
so part of: LOC121244046
location: complement(join(672023..672172,673655..673975,674347..674871,674962..674997,676052..676129,676222..676337,676553..676586,676680..676854,678101..678179,678471..678501))
location: region:672023-678501:-1
so has part: feature:678471-678501:-1:exon
so has part: feature:678101-678179:-1:exon
so has part: feature:676680-676854:-1:exon
so has part: feature:676553-676586:-1:exon
so has part: feature:676222-676337:-1:exon
so has part: feature:676052-676129:-1:exon
so has part: feature:674962-674997:-1:exon
so has part: feature:674347-674871:-1:exon
so has part: feature:673655-673975:-1:exon
so has part: feature:672023-672172:-1:exon

XP_040998024.1
type: Protein
SIO_000068: ncbiprotein

position:672023:-1
position: 672023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678501:-1
position: 678501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:678471-678501:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:678101-678179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:676680-676854:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:676553-676586:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:676222-676337:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:676052-676129:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:674962-674997:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:674347-674871:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:673655-673975:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:672023-672172:-1:exon

LOC121244046
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244046
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulating factor 64-like isoform X1
translation: MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGSDRNREQGRGGPGLAANVDPQKQLASSVAHGESVHHQPIGLHIAITAATVMAGALGGAQAGIQSALANDPLTLRLAKMSRSQLNGIISELKVMATQNKELARQLLIARPQLPKALFQAQIMLGMVTPQVLQMPNIRQTSGLATQPPLHDGQQGQPLAVQTLPRPPAPAQNKMQSGLMAKVQDNQVAALPQNPVVLHQFSALPQPQSQLPQHANNHGAQQATVPLQSAVSTLTAALPQSLGSLSSRSQVQAANSSSPNHQMQPSLLQHSGQVGAANAALFQMVNPNATIKPSLLPRPPLSDAGFQPGPSVSSVTSLAIKKDAEILAQVPDNGTQGLRSNAFSNAPSGSMFRDSLEPVNRPQKLMKMDDGRRTSFSAGSLNVTNTNAPRPSQVSGAGSLPVNPVPKTEGQISQSQLPPDVESVLLQQVLNLTPEQLSLLPPEQQQQVLQLQQVLRRDQIQLS
SIO_010081: LOC121244046
subclass of: SO_0000673
so part of: LOC121244046
location: complement(join(672023..672172,673655..673975,674347..674871,674962..674997,676052..676129,676222..676439,676553..676586,676680..676854,678101..678179,678471..678501))
location: region:672023-678501:-1
so has part: feature:678471-678501:-1:exon
so has part: feature:678101-678179:-1:exon
so has part: feature:676680-676854:-1:exon
so has part: feature:676553-676586:-1:exon
so has part: feature:676222-676439:-1:exon
so has part: feature:676052-676129:-1:exon
so has part: feature:674962-674997:-1:exon
so has part: feature:674347-674871:-1:exon
so has part: feature:673655-673975:-1:exon
so has part: feature:672023-672172:-1:exon

XP_040998023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:678471-678501:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:678101-678179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:676680-676854:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:676553-676586:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:676222-676439:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:676052-676129:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:674962-674997:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:674347-674871:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:673655-673975:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:672023-672172:-1:exon

LOC121244045
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244045
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(680186..684629)
location: region:680186-684629:-1
so has part: feature:680186-684629:-1:exon
subclass of: SO_0000010

121244045
type: Gene
SIO_000068: ncbigene

position:680186:-1
position: 680186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684629:-1
position: 684629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:680186-684629:-1:exon

LOC121244045
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244045
product: NAC domain-containing protein 17-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_041142088.1
SIO_010081: LOC121244045
subclass of: SO_0000673
so part of: LOC121244045
location: complement(join(680186..680734,681116..681683,682181..682483,682568..682845,684146..684629))
location: region:680186-684629:-1
so has part: feature:684146-684629:-1:exon
so has part: feature:682568-682845:-1:exon
so has part: feature:682181-682483:-1:exon
so has part: feature:681116-681683:-1:exon
so has part: feature:680186-680734:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:684146-684629:-1:exon

position:684146:-1
position: 684146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:682568-682845:-1:exon

position:682568:-1
position: 682568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682845:-1
position: 682845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:682181-682483:-1:exon

position:682181:-1
position: 682181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682483:-1
position: 682483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:681116-681683:-1:exon

position:681116:-1
position: 681116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681683:-1
position: 681683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:680186-680734:-1:exon

position:680734:-1
position: 680734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121244045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244045
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAC domain-containing protein 17-like
translation: MMVKSKSCLEEDMWPPGFRFHPTDEELVLYYLKRKICGRRLKLDIIAEVDVYKWDPEELPGLSILKSGDRQWFFFSSRDRKYPNGGRSNRATSHGYWKATGKDRSITCNSRIVGVKKTLVFYRGRAPNGERTDWVMHEYIVDEEELKRCQNVQEYYALYKLYKKSGPGPKNGEQYGAPFKEEEWVDDECSDFNNSADRDISVKQLNEVTSVSVVRVNGQVQSTLDGFEEFMKRIADETELDQPQTNDYAHNQSQVGVEETQSTMVDPSSREGITNEPSRALQPSGQLYDVPASFGHRQSATSQLLIHDTLEAISAPNRKENEPLVIHEEDFLEIDDLLNPQPGFDNNKVVENLHFQADGLCEFDRYHDAAMFLHDIGSINSHIVADPYINIIENNMVNQFDYQLQPNLDGAGQIDNQPWTHDQGRNIHTSAESNLGPFIPPPSGIECDPTNLPTIENENGCEDGDAASPFSSALWAFVESIPTTPAAASENALVNRAFERMSSFGRVRLKLKNTNVSVGSGAETVRRRAGISKGILLISVIGLVCAILWALIGTNVKVLGTSISS
SIO_010081: LOC121244045
subclass of: SO_0000673
so part of: LOC121244045
location: complement(join(680367..680734,681116..681683,682181..682483,682568..682845,684146..684326))
location: region:680367-684326:-1
so has part: feature:684146-684326:-1:exon
so has part: feature:682568-682845:-1:exon
so has part: feature:682181-682483:-1:exon
so has part: feature:681116-681683:-1:exon
so has part: feature:680367-680734:-1:exon

XP_040998022.1
type: Protein
SIO_000068: ncbiprotein

position:680367:-1
position: 680367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684326:-1
position: 684326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:684146-684326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:682568-682845:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:682181-682483:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:681116-681683:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:680367-680734:-1:exon

LOC121245014
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121245014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 693917..697373
location: region:693917-697373:1
so has part: feature:693917-697373:1:exon
subclass of: SO_0000010

121245014
type: Gene
SIO_000068: ncbigene

position:693917:1
position: 693917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:697373:1
position: 697373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693917-697373:1:exon

LOC121245014
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121245014
product: very-long-chain aldehyde decarbonylase GL1-9-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_041143287.1
SIO_010081: LOC121245014
subclass of: SO_0000673
so part of: LOC121245014
location: join(693917..694305,694712..695062,696661..697373)
location: region:693917-697373:1
so has part: feature:693917-694305:1:exon
so has part: feature:694712-695062:1:exon
so has part: feature:696661-697373:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:693917-694305:1:exon

position:694305:1
position: 694305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:694712-695062:1:exon

position:694712:1
position: 694712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695062:1
position: 695062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:696661-697373:1:exon

position:696661:1
position: 696661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121245014
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121245014
product: very-long-chain aldehyde decarbonylase GL1-9-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_041143288.1
SIO_010081: LOC121245014
subclass of: SO_0000673
so part of: LOC121245014
location: join(694380..695062,696661..697373)
location: region:694380-697373:1
so has part: feature:694380-695062:1:exon
so has part: feature:696661-697373:1:exon

position:694380:1
position: 694380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694380-695062:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:696661-697373:1:exon

LOC121245014
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121245014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: very-long-chain aldehyde decarbonylase GL1-9-like
translation: MVFWEGYVSDEAMGTFAPIVVYWLYAGFYQLLPPLDNYRLHSKKEEAVKNSVHLSSVVKGVLLQQLVQATVAQALFLLTSKADTSGITIQPSIPVQIVQIVVAMFVMDTWQYFVHRYMHQNKFLYRHVHSQHHRLVVPYAIGALYNHPLEGLLLDTLGGAISFLVSGMTARTAVIFFCFAVVKTVDDHCGLWLPGNIFHIIFQNNSAYHDIHHQLPGLKYNYSQPFFPIWDKLLGTYMPYYLVKRPEGGLEARAMKD
SIO_010081: LOC121245014
subclass of: SO_0000673
so part of: LOC121245014
location: join(694832..695062,696661..697203)
location: region:694832-697203:1
so has part: feature:694832-695062:1:exon
so has part: feature:696661-697203:1:exon

XP_040999221.1
type: Protein
SIO_000068: ncbiprotein

position:694832:1
position: 694832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:697203:1
position: 697203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694832-695062:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:696661-697203:1:exon

LOC121245014
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121245014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: very-long-chain aldehyde decarbonylase GL1-9-like
translation: MVFWEGYVSDEAMGTFAPIVVYWLYAGFYQLLPPLDNYRLHSKKEEAVKNSVHLSSVVKGVLLQQLVQATVAQALFLLTSKADTSGITIQPSIPVQIVQIVVAMFVMDTWQYFVHRYMHQNKFLYRHVHSQHHRLVVPYAIGALYNHPLEGLLLDTLGGAISFLVSGMTARTAVIFFCFAVVKTVDDHCGLWLPGNIFHIIFQNNSAYHDIHHQLPGLKYNYSQPFFPIWDKLLGTYMPYYLVKRPEGGLEARAMKD
SIO_010081: LOC121245014
subclass of: SO_0000673
so part of: LOC121245014
location: join(694832..695062,696661..697203)
location: region:694832-697203:1
so has part: feature:694832-695062:1:exon
so has part: feature:696661-697203:1:exon

XP_040999222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:694832-695062:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:696661-697203:1:exon

LOC121244688
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244688
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 699454..702333
location: region:699454-702333:1
so has part: feature:699454-702333:1:exon
subclass of: SO_0000010

121244688
type: Gene
SIO_000068: ncbigene

position:699454:1
position: 699454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:702333:1
position: 702333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:699454-702333:1:exon

LOC121244688
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244688
product: co-chaperone protein p23-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 106 samples with support for all annotated introns
transcript id: XM_041142861.1
SIO_010081: LOC121244688
subclass of: SO_0000673
so part of: LOC121244688
location: join(699454..699603,701167..701353,701436..701598,701694..701731,701812..701869,701963..702333)
location: region:699454-702333:1
so has part: feature:699454-699603:1:exon
so has part: feature:701167-701353:1:exon
so has part: feature:701436-701598:1:exon
so has part: feature:701694-701731:1:exon
so has part: feature:701812-701869:1:exon
so has part: feature:701963-702333:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:699454-699603:1:exon

position:699603:1
position: 699603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:701167-701353:1:exon

position:701167:1
position: 701167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:701353:1
position: 701353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:701436-701598:1:exon

position:701436:1
position: 701436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:701598:1
position: 701598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:701694-701731:1:exon

position:701694:1
position: 701694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:701731:1
position: 701731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:701812-701869:1:exon

position:701812:1
position: 701812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:701869:1
position: 701869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:701963-702333:1:exon

position:701963:1
position: 701963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244688
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244688
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: co-chaperone protein p23-1-like
translation: MSRHPSVKWAQRFDVLFITIDLPDAQDVKLKLEPEGKFFFSATIGAEKIPYEIDIDLYDKVDVNESKASIGLRNICYLVKKAEDKWWSRLLKQEGKPPVFLKVDWDKWVDEDEEQDKKPGNDMDFGDVDFSKLNMGGGEGFDADAAGEDDVSLEDSDTEEEENVEQAPSSSGKPDAKASLAAASGGGEPGEKA
SIO_010081: LOC121244688
subclass of: SO_0000673
so part of: LOC121244688
location: join(699599..699603,701167..701353,701436..701598,701694..701731,701812..701869,701963..702093)
location: region:699599-702093:1
so has part: feature:699599-699603:1:exon
so has part: feature:701167-701353:1:exon
so has part: feature:701436-701598:1:exon
so has part: feature:701694-701731:1:exon
so has part: feature:701812-701869:1:exon
so has part: feature:701963-702093:1:exon

XP_040998795.1
type: Protein
SIO_000068: ncbiprotein

position:699599:1
position: 699599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:702093:1
position: 702093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:699599-699603:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701167-701353:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:701436-701598:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:701694-701731:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:701812-701869:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:701963-702093:1:exon

LOC121244687
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244687
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(702689..704960)
location: region:702689-704960:-1
so has part: feature:702689-704960:-1:exon
subclass of: SO_0000010

121244687
type: Gene
SIO_000068: ncbigene

position:702689:-1
position: 702689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704960:-1
position: 704960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:702689-704960:-1:exon

LOC121244687
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244687
product: pentatricopeptide repeat-containing protein At1g34160
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041142860.1
SIO_010081: LOC121244687
subclass of: SO_0000673
so part of: LOC121244687
location: complement(702689..704960)
location: region:702689-704960:-1
so has part: feature:702689-704960:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:702689-704960:-1:exon

LOC121244687
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244687
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At1g34160
translation: MASLESLIQKCNSLSHIKQLQAHFITTSQLLFCSSRTKLLELCAVSPFGDLSYATHLFRHIQNPSTNNWNAVVRGLAAGPEPTRAISWYRTMSRQSCRVDALTCSFALKACARALARSEAMQIHSQVVRLGFYADVLLKTTLLDAYAKSGDLDGAKKVFDEMDVRDIASWNALIAGLAQGSRPSEAIELFNGMRIEGWKPDEITVLGALSACSQLGALKEGEKVHSYIMGEKLDMNVQVCNAVIDMYAKCGFANKAYTVFKNMCCRSLVTWNTMIMAFAMHGDGYKALELFEQMGQAGVHPDAVSYLGALCACNHAGLVNDGVRLFDSMSGSGLTPNVKHYGSVVDLLGRAGRLKEAYDIVSSMPMKSDEVLWQTLLGACKTYGNVEMAEIASRKLVEMGSNSCGDFVLLSNVYAAHERWKDVDRVRTAMKDRDVKKIPGFSYIEVDGVIHKFVNGDQNHFNWREIYAKLDEIKFRTKAYGYVAETNFVLHDIGQEEKENALCYHSEKLAVAFGLISTAEGTPIQVIKNLRICGDCHVVIKIISKIYNREIVVRDRARFHRFTEGLCSCKDYW
SIO_010081: LOC121244687
subclass of: SO_0000673
so part of: LOC121244687
location: complement(703160..704881)
location: region:703160-704881:-1
so has part: feature:703160-704881:-1:exon

XP_040998794.1
type: Protein
SIO_000068: ncbiprotein

position:703160:-1
position: 703160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704881:-1
position: 704881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:703160-704881:-1:exon

LOC121244974
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244974
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(705688..713057)
location: region:705688-713057:-1
so has part: feature:705688-713057:-1:exon
subclass of: SO_0000010

121244974
type: Gene
SIO_000068: ncbigene

position:705688:-1
position: 705688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713057:-1
position: 713057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:705688-713057:-1:exon

LOC121244974
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244974
product: probable F-actin-capping protein subunit beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 12 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 106 samples with support for all annotated introns
transcript id: XM_041143231.1
SIO_010081: LOC121244974
subclass of: SO_0000673
so part of: LOC121244974
location: complement(join(705688..706099,710562..710681,710744..710817,710890..710972,711103..711216,711858..711928,712868..713057))
location: region:705688-713057:-1
so has part: feature:712868-713057:-1:exon
so has part: feature:711858-711928:-1:exon
so has part: feature:711103-711216:-1:exon
so has part: feature:710890-710972:-1:exon
so has part: feature:710744-710817:-1:exon
so has part: feature:710562-710681:-1:exon
so has part: feature:705688-706099:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:712868-713057:-1:exon

position:712868:-1
position: 712868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:711858-711928:-1:exon

position:711858:-1
position: 711858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711928:-1
position: 711928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:711103-711216:-1:exon

position:711103:-1
position: 711103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711216:-1
position: 711216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:710890-710972:-1:exon

position:710890:-1
position: 710890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710972:-1
position: 710972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:710744-710817:-1:exon

position:710744:-1
position: 710744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710817:-1
position: 710817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:710562-710681:-1:exon

position:710562:-1
position: 710562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710681:-1
position: 710681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:705688-706099:-1:exon

position:706099:-1
position: 706099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121244974
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244974
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable F-actin-capping protein subunit beta
translation: MEAAMGLMRRIPPKHTDAALSALLSLLPHHSSDLLSQVDQPLQVLCDVDCGKEFILCEYNRDADSYRSPWSNKYHPPLKDGALPSMVLRKLEVEANDIFAIYRDQYYEGGFSSVYMWEDDNEGFVACFLIKKDGSKTGQGRRGYLQEGAWDAIHVIEVGPEEEGVAHYCLTSTVMLSLTTDNELSGTFSLSGSIRRQMDMNLSVAEGHLCNMGRMIEEMESKLRNSLDQVYFGKTKEMVCTLRPPSEVVMRLPDC
SIO_010081: LOC121244974
subclass of: SO_0000673
so part of: LOC121244974
location: complement(join(705923..706099,710562..710681,710744..710817,710890..710972,711103..711216,711858..711928,712868..712996))
location: region:705923-712996:-1
so has part: feature:712868-712996:-1:exon
so has part: feature:711858-711928:-1:exon
so has part: feature:711103-711216:-1:exon
so has part: feature:710890-710972:-1:exon
so has part: feature:710744-710817:-1:exon
so has part: feature:710562-710681:-1:exon
so has part: feature:705923-706099:-1:exon

XP_040999165.1
type: Protein
SIO_000068: ncbiprotein

position:705923:-1
position: 705923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712996:-1
position: 712996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:712868-712996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:711858-711928:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:711103-711216:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:710890-710972:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:710744-710817:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:710562-710681:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:705923-706099:-1:exon

LOC121243907
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121243907
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 713580..717697
location: region:713580-717697:1
so has part: feature:713580-717697:1:exon
subclass of: SO_0000010

121243907
type: Gene
SIO_000068: ncbigene

position:713580:1
position: 713580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717697:1
position: 717697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:713580-717697:1:exon

LOC121243907
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121243907
product: MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041141966.1
SIO_010081: LOC121243907
subclass of: SO_0000673
so part of: LOC121243907
location: join(713580..713722,714326..714600,714983..715076,715224..717061,717300..717697)
location: region:713580-717697:1
so has part: feature:713580-713722:1:exon
so has part: feature:714326-714600:1:exon
so has part: feature:714983-715076:1:exon
so has part: feature:715224-717061:1:exon
so has part: feature:717300-717697:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:713580-713722:1:exon

position:713722:1
position: 713722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:714326-714600:1:exon

position:714326:1
position: 714326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714600:1
position: 714600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:714983-715076:1:exon

position:714983:1
position: 714983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:715076:1
position: 715076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:715224-717061:1:exon

position:715224:1
position: 715224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717061:1
position: 717061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:717300-717697:1:exon

position:717300:1
position: 717300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121243907
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121243907
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 2
translation: MDIGNGSASNERRKVHKSALDSADRLSVSLLKTSPKSPMSPKSPMSPKSPRSPRVHGKHSPFKHDRSSHSPKDGRPKKGKMWLWGKGTWGGLLDTDGTYFLDPNDPNYDSSEECEPLDAGKSTGDFEEYKKKAIIIVEEYFVTDDVASTSNELRELGNPRYRFYFVKKLVSMAMDRHDKEKEMAAALLSSLYADVVDPPQVYKGFSKLVKSADDLIVDIPDTVDVLALFIARAVVDDILPPAFLTKEMASLPKDSKGVEVLKRCEKGYLAAPLHADLIERRWGGSMNKTAENVKARIINLLMEYVNSSDMKEACRCINDLKVPFFHHEIVKRALIMAMERRQAEGQLLDLLKEAVEEGLINSSQISKGFGRMIDTVDDLSLDIPNARGILQSLISKAASEGWLCASSLKSLKLEPGKQALDVGSAKIFKMKAQSTIQEYFLSGDISEVSNFLESEDKTCSAELNALFVKKLITLAMDRKSREKEMASVLLSSLYFPAEDVVNGFTMLIESADDTALDNPVVVEDLAMFLARAEVDEVLAPQHLEEIGTQCVGPESIGSKVLQMARSLLKARLSGERILRCWGGGGSSRPGWAVEDVKDKIGKLLEEFESGGDIREACCCIKELGMPFFHHEIVKKALVTIMEKKNEKLWSLLEECFGSGLITMNQMTEGFGRVFESLDDLALDVPDAKKQYTNYVERAKIAGWLDSSSYFSKSEHATSTH
SIO_010081: LOC121243907
subclass of: SO_0000673
so part of: LOC121243907
location: join(714359..714600,714983..715076,715224..717050)
location: region:714359-717050:1
so has part: feature:714359-714600:1:exon
so has part: feature:714983-715076:1:exon
so has part: feature:715224-717050:1:exon

XP_040997900.1
type: Protein
SIO_000068: ncbiprotein

position:714359:1
position: 714359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717050:1
position: 717050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:714359-714600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:714983-715076:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:715224-717050:1:exon

LOC121244844
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244844
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 718727..721535
location: region:718727-721535:1
so has part: feature:718727-721535:1:exon
subclass of: SO_0000010

121244844
type: Gene
SIO_000068: ncbigene

position:718727:1
position: 718727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:721535:1
position: 721535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:718727-721535:1:exon

LOC121244844
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244844
product: uncharacterized LOC121244844
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_041143065.1
SIO_010081: LOC121244844
subclass of: SO_0000673
so part of: LOC121244844
location: join(718727..719169,721065..721535)
location: region:718727-721535:1
so has part: feature:718727-719169:1:exon
so has part: feature:721065-721535:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:718727-719169:1:exon

position:719169:1
position: 719169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:721065-721535:1:exon

position:721065:1
position: 721065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244844
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244844
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121244844
translation: MEKTEKEAEAAEIVPEIEEAGSDPDGSPQPTDQSRSTRTVKTKVPEVEIRLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSIFAFNPRSGRGLAIRFNSRNGRSVLTYRDGSVIYVDGEPKDSLMKPVTKILVGVAVITILITLVLKETPVWVEKFNIFGGSFPPWILACVVIVFTRTRKRTKDFLKKFGW
SIO_010081: LOC121244844
subclass of: SO_0000673
so part of: LOC121244844
location: join(718789..719169,721065..721277)
location: region:718789-721277:1
so has part: feature:718789-719169:1:exon
so has part: feature:721065-721277:1:exon

XP_040998999.1
type: Protein
SIO_000068: ncbiprotein

position:718789:1
position: 718789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:721277:1
position: 721277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:718789-719169:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:721065-721277:1:exon

LOC121244528
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244528
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(723030..744053)
location: region:723030-744053:-1
so has part: feature:723030-744053:-1:exon
subclass of: SO_0000010

121244528
type: Gene
SIO_000068: ncbigene

position:723030:-1
position: 723030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744053:-1
position: 744053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:723030-744053:-1:exon

LOC121244528
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244528
product: cleavage stimulation factor subunit 77, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_041142637.1
SIO_010081: LOC121244528
subclass of: SO_0000673
so part of: LOC121244528
location: complement(join(723030..723392,724290..724511,725859..726032,726660..726761,726832..726934,727637..727789,734391..734450,734713..734809,735206..735270,735612..735752,736437..736505,736583..736641,736904..737024,737502..737565,738727..738773,739521..739649,739797..739937,740065..740126,741201..741301,742600..742709,743381..743443,743577..743657,743771..744053))
location: region:723030-744053:-1
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urn:…
SIO_000300: 1
SIO_000628: feature:743771-744053:-1:exon

position:743771:-1
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reference: sequence
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urn:…
SIO_000300: 2
SIO_000628: feature:743577-743657:-1:exon

position:743577:-1
position: 743577
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position:743657:-1
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urn:…
SIO_000300: 3
SIO_000628: feature:743381-743443:-1:exon

position:743381:-1
position: 743381
reference: sequence
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position:743443:-1
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urn:…
SIO_000300: 4
SIO_000628: feature:742600-742709:-1:exon

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position: 742600
reference: sequence
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position:742709:-1
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urn:…
SIO_000300: 5
SIO_000628: feature:741201-741301:-1:exon

position:741201:-1
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reference: sequence
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position:741301:-1
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urn:…
SIO_000300: 6
SIO_000628: feature:740065-740126:-1:exon

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position:740126:-1
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urn:…
SIO_000300: 7
SIO_000628: feature:739797-739937:-1:exon

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urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
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SIO_000300: 10
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urn:…
SIO_000300: 11
SIO_000628: feature:736904-737024:-1:exon

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urn:…
SIO_000300: 12
SIO_000628: feature:736583-736641:-1:exon

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SIO_000300: 13
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SIO_000300: 14
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SIO_000300: 15
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SIO_000300: 16
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SIO_000300: 17
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SIO_000300: 18
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SIO_000300: 19
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SIO_000300: 20
SIO_000628: feature:726660-726761:-1:exon

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urn:…
SIO_000300: 21
SIO_000628: feature:725859-726032:-1:exon

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SIO_000300: 22
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SIO_000300: 23
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LOC121244528
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244528
product: cleavage stimulation factor subunit 77, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 85 samples with support for all annotated introns
transcript id: XM_041142641.1
SIO_010081: LOC121244528
subclass of: SO_0000673
so part of: LOC121244528
location: complement(join(723030..723392,724290..724511,725859..726032,726660..726755,726832..726898,727637..727789,734391..734450,734713..734809,735206..735270,735612..735752,736437..736505,736583..736641,736904..737024,737502..737565,738727..738773,739521..739649,739797..739937,740065..740126,741201..741301,742600..742709,743381..743443,743577..743657,743768..744053))
location: region:723030-744053:-1
so has part: feature:743768-744053:-1:exon
so has part: feature:743577-743657:-1:exon
so has part: feature:743381-743443:-1:exon
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so has part: feature:739797-739937:-1:exon
so has part: feature:739521-739649:-1:exon
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so has part: feature:736904-737024:-1:exon
so has part: feature:736583-736641:-1:exon
so has part: feature:736437-736505:-1:exon
so has part: feature:735612-735752:-1:exon
so has part: feature:735206-735270:-1:exon
so has part: feature:734713-734809:-1:exon
so has part: feature:734391-734450:-1:exon
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so has part: feature:725859-726032:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:743768-744053:-1:exon

position:743768:-1
position: 743768
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:743577-743657:-1:exon

urn:…
SIO_000300: 3
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SIO_000300: 4
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SIO_000300: 5
SIO_000628: feature:741201-741301:-1:exon

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SIO_000300: 6
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SIO_000300: 7
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SIO_000300: 8
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SIO_000300: 9
SIO_000628: feature:738727-738773:-1:exon

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SIO_000300: 10
SIO_000628: feature:737502-737565:-1:exon

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SIO_000300: 11
SIO_000628: feature:736904-737024:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:736583-736641:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:736437-736505:-1:exon

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SIO_000300: 14
SIO_000628: feature:735612-735752:-1:exon

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SIO_000300: 15
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SIO_000300: 16
SIO_000628: feature:734713-734809:-1:exon

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SIO_000300: 17
SIO_000628: feature:734391-734450:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:727637-727789:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:726832-726898:-1:exon

position:726898:-1
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reference: sequence
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urn:…
SIO_000300: 20
SIO_000628: feature:726660-726755:-1:exon

position:726755:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 21
SIO_000628: feature:725859-726032:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:724290-724511:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:723030-723392:-1:exon

LOC121244528
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244528
product: cleavage stimulation factor subunit 77, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 106 samples with support for all annotated introns
transcript id: XM_041142640.1
SIO_010081: LOC121244528
subclass of: SO_0000673
so part of: LOC121244528
location: complement(join(723030..723392,724290..724511,725859..726032,726660..726761,726832..726898,727637..727789,734391..734450,734713..734809,735206..735270,735612..735752,736437..736505,736583..736641,736904..737024,737502..737565,738727..738773,739521..739649,739797..739937,740065..740126,741201..741301,742600..742709,743381..743443,743577..743657,743768..744053))
location: region:723030-744053:-1
so has part: feature:743768-744053:-1:exon
so has part: feature:743577-743657:-1:exon
so has part: feature:743381-743443:-1:exon
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so has part: feature:740065-740126:-1:exon
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so has part: feature:739521-739649:-1:exon
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so has part: feature:735206-735270:-1:exon
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so has part: feature:727637-727789:-1:exon
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so has part: feature:726660-726761:-1:exon
so has part: feature:725859-726032:-1:exon
so has part: feature:724290-724511:-1:exon
so has part: feature:723030-723392:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743768-744053:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743577-743657:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:743381-743443:-1:exon

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SIO_000300: 4
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SIO_000300: 5
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urn:…
SIO_000300: 6
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SIO_000300: 7
SIO_000628: feature:739797-739937:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:739521-739649:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:738727-738773:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:737502-737565:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:736904-737024:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:736583-736641:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:736437-736505:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:735612-735752:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:735206-735270:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:734713-734809:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:734391-734450:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:727637-727789:-1:exon

urn:…
SIO_000300: 19
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urn:…
SIO_000300: 20
SIO_000628: feature:726660-726761:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:725859-726032:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:724290-724511:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:723030-723392:-1:exon

LOC121244528
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244528
product: cleavage stimulation factor subunit 77, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_041142638.1
SIO_010081: LOC121244528
subclass of: SO_0000673
so part of: LOC121244528
location: complement(join(723030..723392,724290..724511,725859..726032,726660..726755,726832..726934,727637..727789,734391..734450,734713..734809,735206..735270,735612..735752,736437..736505,736583..736641,736904..737024,737502..737565,738727..738773,739521..739649,739797..739937,740065..740126,741201..741301,742600..742709,743381..743443,743577..743657,743768..744053))
location: region:723030-744053:-1
so has part: feature:743768-744053:-1:exon
so has part: feature:743577-743657:-1:exon
so has part: feature:743381-743443:-1:exon
so has part: feature:742600-742709:-1:exon
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so has part: feature:740065-740126:-1:exon
so has part: feature:739797-739937:-1:exon
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so has part: feature:725859-726032:-1:exon
so has part: feature:724290-724511:-1:exon
so has part: feature:723030-723392:-1:exon

urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
SIO_000628: feature:743381-743443:-1:exon

urn:…
SIO_000300: 4
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SIO_000300: 5
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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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SIO_000300: 8
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urn:…
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urn:…
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urn:…
SIO_000300: 11
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SIO_000300: 13
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SIO_000300: 14
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urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
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urn:…
SIO_000300: 18
SIO_000628: feature:727637-727789:-1:exon

urn:…
SIO_000300: 19
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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
SIO_000628: feature:725859-726032:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:724290-724511:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:723030-723392:-1:exon

LOC121244528
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244528
product: cleavage stimulation factor subunit 77, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_041142636.1
SIO_010081: LOC121244528
subclass of: SO_0000673
so part of: LOC121244528
location: complement(join(723030..723392,724290..724511,725859..726032,726660..726761,726832..726934,727637..727789,734391..734450,734713..734809,735206..735270,735612..735752,736437..736505,736583..736641,736904..737024,737502..737565,738727..738773,739521..739649,739797..739937,740065..740126,741201..741301,742600..742709,743381..743443,743577..743657,743768..744053))
location: region:723030-744053:-1
so has part: feature:743768-744053:-1:exon
so has part: feature:743577-743657:-1:exon
so has part: feature:743381-743443:-1:exon
so has part: feature:742600-742709:-1:exon
so has part: feature:741201-741301:-1:exon
so has part: feature:740065-740126:-1:exon
so has part: feature:739797-739937:-1:exon
so has part: feature:739521-739649:-1:exon
so has part: feature:738727-738773:-1:exon
so has part: feature:737502-737565:-1:exon
so has part: feature:736904-737024:-1:exon
so has part: feature:736583-736641:-1:exon
so has part: feature:736437-736505:-1:exon
so has part: feature:735612-735752:-1:exon
so has part: feature:735206-735270:-1:exon
so has part: feature:734713-734809:-1:exon
so has part: feature:734391-734450:-1:exon
so has part: feature:727637-727789:-1:exon
so has part: feature:726832-726934:-1:exon
so has part: feature:726660-726761:-1:exon
so has part: feature:725859-726032:-1:exon
so has part: feature:724290-724511:-1:exon
so has part: feature:723030-723392:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743768-744053:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743577-743657:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:743381-743443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:742600-742709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:741201-741301:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:740065-740126:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:739797-739937:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:739521-739649:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:738727-738773:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:737502-737565:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:736904-737024:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:736583-736641:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:736437-736505:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:735612-735752:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:735206-735270:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:734713-734809:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:734391-734450:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:727637-727789:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:726832-726934:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:726660-726761:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:725859-726032:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:724290-724511:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:723030-723392:-1:exon

LOC121244528
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244528
product: cleavage stimulation factor subunit 77, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_041142639.1
SIO_010081: LOC121244528
subclass of: SO_0000673
so part of: LOC121244528
location: complement(join(723030..723392,724290..724511,725859..726032,726660..726761,726832..726934,727637..727789,734391..734450,734713..734809,735206..735270,735612..735752,736437..736505,736583..736641,736904..737024,737502..737565,738727..738773,739521..739649,739797..739937,740065..740126,741201..741301,742600..742709,743381..743443,743577..743657,743746..744053))
location: region:723030-744053:-1
so has part: feature:743746-744053:-1:exon
so has part: feature:743577-743657:-1:exon
so has part: feature:743381-743443:-1:exon
so has part: feature:742600-742709:-1:exon
so has part: feature:741201-741301:-1:exon
so has part: feature:740065-740126:-1:exon
so has part: feature:739797-739937:-1:exon
so has part: feature:739521-739649:-1:exon
so has part: feature:738727-738773:-1:exon
so has part: feature:737502-737565:-1:exon
so has part: feature:736904-737024:-1:exon
so has part: feature:736583-736641:-1:exon
so has part: feature:736437-736505:-1:exon
so has part: feature:735612-735752:-1:exon
so has part: feature:735206-735270:-1:exon
so has part: feature:734713-734809:-1:exon
so has part: feature:734391-734450:-1:exon
so has part: feature:727637-727789:-1:exon
so has part: feature:726832-726934:-1:exon
so has part: feature:726660-726761:-1:exon
so has part: feature:725859-726032:-1:exon
so has part: feature:724290-724511:-1:exon
so has part: feature:723030-723392:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743746-744053:-1:exon

position:743746:-1
position: 743746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:743577-743657:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:743381-743443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:742600-742709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:741201-741301:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:740065-740126:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:739797-739937:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:739521-739649:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:738727-738773:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:737502-737565:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:736904-737024:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:736583-736641:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:736437-736505:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:735612-735752:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:735206-735270:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:734713-734809:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:734391-734450:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:727637-727789:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:726832-726934:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:726660-726761:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:725859-726032:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:724290-724511:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:723030-723392:-1:exon

LOC121244528
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244528
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulation factor subunit 77 isoform X2
translation: MSSTDKTMGDSKALDDKYNVEAAEVLANEAQHLPITEAAPIYEQLLTLFPTAAKYWKQYVEAHMAVNNDDATKQIFSRCLLNCLQIPLWRCYIRFIKMANESKGLEGQEETRKAFDFMLNYVGADIASGPIWMEYITFLKSLPAQSTQEESQRMTAVRKVYQKAIVTPTHHIEQLWRDYENFENSVSRQLAKGLLSEYQPKFNSARAVYRERKKYVDEIDWNMLAVPPSGSYKEEVQWMGWKRLLAFEKGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDIWYDYATWHAKSGSVDTAVKVFQRALKALPDSEMLRYAYAELEESRGAIQSAKKIYESLLGDDVNTTTLAHIQFIRFLRRTEGVEAARKYFLDARKSPNCTYHVYVAYAMMAFCLDKDREIAHNVFEAGLKRFMHEPLYILEYADFLTRLNDDRNIRALFERALSSLPPEESLEVWKRFAQFEQTYGDLASMLKVEQRRKEALSRTGEEGASALVGSLQDVVSRYSFMDLWPCSSKDLDHLARQEIIPRPVFSPSFQWLAKNMDRKVEKLALPNGPGSVDKDYAGLISNSTVSAKVVNPDVSKMVIYDPRQKSGIETLPSTTSSGVPAAYSNLSNPAAAIVGGGMTNAFDEILKATPPALVAFLASLPVVEGPTPDVDVVLSICLQSDIPAGQTGKLGTSSVQLSGGSAPTTSVLSGSSKSHPIPSAASFKTTRDRQAGKRKDLDRQEDDETATVQSQPLPRDVFRIRQIQKSRGGTTTIARGVTTSQTGSASYGSALSGDLSGSTG
SIO_010081: LOC121244528
subclass of: SO_0000673
so part of: LOC121244528
location: complement(join(723205..723392,724290..724511,725859..726032,726660..726761,726832..726934,727637..727789,734391..734450,734713..734809,735206..735270,735612..735752,736437..736505,736583..736641,736904..737024,737502..737565,738727..738773,739521..739649,739797..739937,740065..740126,741201..741301,742600..742709,743381..743443,743577..743657,743771..743782))
location: region:723205-743782:-1
so has part: feature:743771-743782:-1:exon
so has part: feature:743577-743657:-1:exon
so has part: feature:743381-743443:-1:exon
so has part: feature:742600-742709:-1:exon
so has part: feature:741201-741301:-1:exon
so has part: feature:740065-740126:-1:exon
so has part: feature:739797-739937:-1:exon
so has part: feature:739521-739649:-1:exon
so has part: feature:738727-738773:-1:exon
so has part: feature:737502-737565:-1:exon
so has part: feature:736904-737024:-1:exon
so has part: feature:736583-736641:-1:exon
so has part: feature:736437-736505:-1:exon
so has part: feature:735612-735752:-1:exon
so has part: feature:735206-735270:-1:exon
so has part: feature:734713-734809:-1:exon
so has part: feature:734391-734450:-1:exon
so has part: feature:727637-727789:-1:exon
so has part: feature:726832-726934:-1:exon
so has part: feature:726660-726761:-1:exon
so has part: feature:725859-726032:-1:exon
so has part: feature:724290-724511:-1:exon
so has part: feature:723205-723392:-1:exon

XP_040998571.1
type: Protein
SIO_000068: ncbiprotein

position:723205:-1
position: 723205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743782:-1
position: 743782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743771-743782:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743577-743657:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:743381-743443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:742600-742709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:741201-741301:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:740065-740126:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:739797-739937:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:739521-739649:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:738727-738773:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:737502-737565:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:736904-737024:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:736583-736641:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:736437-736505:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:735612-735752:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:735206-735270:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:734713-734809:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:734391-734450:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:727637-727789:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:726832-726934:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:726660-726761:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:725859-726032:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:724290-724511:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:723205-723392:-1:exon

LOC121244528
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244528
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulation factor subunit 77 isoform X6
translation: MSSTVDKTMGDSKALDDKYNVEAAEVLANEAQHLPITEAAPIYEQLLTLFPTAAKYWKQYVEAHMAVNNDDATKQIFSRCLLNCLQIPLWRCYIRFIKMANESKGLEGQEETRKAFDFMLNYVGADIASGPIWMEYITFLKSLPAQSTQEESQRMTAVRKVYQKAIVTPTHHIEQLWRDYENFENSVSRQLAKGLLSEYQPKFNSARAVYRERKKYVDEIDWNMLAVPPSGSYKEEVQWMGWKRLLAFEKGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDIWYDYATWHAKSGSVDTAVKVFQRALKALPDSEMLRYAYAELEESRGAIQSAKKIYESLLGDDVNTTTLAHIQFIRFLRRTEGVEAARKYFLDARKSPNCTYHVYVAYAMMAFCLDKDREIAHNVFEAGLKRFMHEPLYILEYADFLTRLNDDRNIRALFERALSSLPPEESLEVWKRFAQFEQTYGDLASMLKVEQRRKEALSRTGEEGASALVGSLQDVVSRYSFMDLWPCSSKDLDHLARQEWLAKNMDRKVEKLALPNGPGSVDYAGLISNSTVSAKVVNPDVSKMVIYDPRQKSGIETLPSTTSSGVPAAYSNLSNPAAAIVGGGMTNAFDEILKATPPALVAFLASLPVVEGPTPDVDVVLSICLQSDIPAGQTGKLGTSSVQLSGGSAPTTSVLSGSSKSHPIPSAASFKTTRDRQAGKRKDLDRQEDDETATVQSQPLPRDVFRIRQIQKSRGGTTTIARGVTTSQTGSASYGSALSGDLSGSTG
SIO_010081: LOC121244528
subclass of: SO_0000673
so part of: LOC121244528
location: complement(join(723205..723392,724290..724511,725859..726032,726660..726755,726832..726898,727637..727789,734391..734450,734713..734809,735206..735270,735612..735752,736437..736505,736583..736641,736904..737024,737502..737565,738727..738773,739521..739649,739797..739937,740065..740126,741201..741301,742600..742709,743381..743443,743577..743657,743768..743782))
location: region:723205-743782:-1
so has part: feature:743768-743782:-1:exon
so has part: feature:743577-743657:-1:exon
so has part: feature:743381-743443:-1:exon
so has part: feature:742600-742709:-1:exon
so has part: feature:741201-741301:-1:exon
so has part: feature:740065-740126:-1:exon
so has part: feature:739797-739937:-1:exon
so has part: feature:739521-739649:-1:exon
so has part: feature:738727-738773:-1:exon
so has part: feature:737502-737565:-1:exon
so has part: feature:736904-737024:-1:exon
so has part: feature:736583-736641:-1:exon
so has part: feature:736437-736505:-1:exon
so has part: feature:735612-735752:-1:exon
so has part: feature:735206-735270:-1:exon
so has part: feature:734713-734809:-1:exon
so has part: feature:734391-734450:-1:exon
so has part: feature:727637-727789:-1:exon
so has part: feature:726832-726898:-1:exon
so has part: feature:726660-726755:-1:exon
so has part: feature:725859-726032:-1:exon
so has part: feature:724290-724511:-1:exon
so has part: feature:723205-723392:-1:exon

XP_040998575.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:743768-743782:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743577-743657:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:743381-743443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:742600-742709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:741201-741301:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:740065-740126:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:739797-739937:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:739521-739649:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:738727-738773:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:737502-737565:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:736904-737024:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:736583-736641:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:736437-736505:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:735612-735752:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:735206-735270:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:734713-734809:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:734391-734450:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:727637-727789:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:726832-726898:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:726660-726755:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:725859-726032:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:724290-724511:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:723205-723392:-1:exon

LOC121244528
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244528
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulation factor subunit 77 isoform X5
translation: MSSTVDKTMGDSKALDDKYNVEAAEVLANEAQHLPITEAAPIYEQLLTLFPTAAKYWKQYVEAHMAVNNDDATKQIFSRCLLNCLQIPLWRCYIRFIKMANESKGLEGQEETRKAFDFMLNYVGADIASGPIWMEYITFLKSLPAQSTQEESQRMTAVRKVYQKAIVTPTHHIEQLWRDYENFENSVSRQLAKGLLSEYQPKFNSARAVYRERKKYVDEIDWNMLAVPPSGSYKEEVQWMGWKRLLAFEKGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDIWYDYATWHAKSGSVDTAVKVFQRALKALPDSEMLRYAYAELEESRGAIQSAKKIYESLLGDDVNTTTLAHIQFIRFLRRTEGVEAARKYFLDARKSPNCTYHVYVAYAMMAFCLDKDREIAHNVFEAGLKRFMHEPLYILEYADFLTRLNDDRNIRALFERALSSLPPEESLEVWKRFAQFEQTYGDLASMLKVEQRRKEALSRTGEEGASALVGSLQDVVSRYSFMDLWPCSSKDLDHLARQEWLAKNMDRKVEKLALPNGPGSVDKDYAGLISNSTVSAKVVNPDVSKMVIYDPRQKSGIETLPSTTSSGVPAAYSNLSNPAAAIVGGGMTNAFDEILKATPPALVAFLASLPVVEGPTPDVDVVLSICLQSDIPAGQTGKLGTSSVQLSGGSAPTTSVLSGSSKSHPIPSAASFKTTRDRQAGKRKDLDRQEDDETATVQSQPLPRDVFRIRQIQKSRGGTTTIARGVTTSQTGSASYGSALSGDLSGSTG
SIO_010081: LOC121244528
subclass of: SO_0000673
so part of: LOC121244528
location: complement(join(723205..723392,724290..724511,725859..726032,726660..726761,726832..726898,727637..727789,734391..734450,734713..734809,735206..735270,735612..735752,736437..736505,736583..736641,736904..737024,737502..737565,738727..738773,739521..739649,739797..739937,740065..740126,741201..741301,742600..742709,743381..743443,743577..743657,743768..743782))
location: region:723205-743782:-1
so has part: feature:743768-743782:-1:exon
so has part: feature:743577-743657:-1:exon
so has part: feature:743381-743443:-1:exon
so has part: feature:742600-742709:-1:exon
so has part: feature:741201-741301:-1:exon
so has part: feature:740065-740126:-1:exon
so has part: feature:739797-739937:-1:exon
so has part: feature:739521-739649:-1:exon
so has part: feature:738727-738773:-1:exon
so has part: feature:737502-737565:-1:exon
so has part: feature:736904-737024:-1:exon
so has part: feature:736583-736641:-1:exon
so has part: feature:736437-736505:-1:exon
so has part: feature:735612-735752:-1:exon
so has part: feature:735206-735270:-1:exon
so has part: feature:734713-734809:-1:exon
so has part: feature:734391-734450:-1:exon
so has part: feature:727637-727789:-1:exon
so has part: feature:726832-726898:-1:exon
so has part: feature:726660-726761:-1:exon
so has part: feature:725859-726032:-1:exon
so has part: feature:724290-724511:-1:exon
so has part: feature:723205-723392:-1:exon

XP_040998574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:743768-743782:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743577-743657:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:743381-743443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:742600-742709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:741201-741301:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:740065-740126:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:739797-739937:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:739521-739649:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:738727-738773:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:737502-737565:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:736904-737024:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:736583-736641:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:736437-736505:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:735612-735752:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:735206-735270:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:734713-734809:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:734391-734450:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:727637-727789:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:726832-726898:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:726660-726761:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:725859-726032:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:724290-724511:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:723205-723392:-1:exon

LOC121244528
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244528
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulation factor subunit 77 isoform X3
translation: MSSTVDKTMGDSKALDDKYNVEAAEVLANEAQHLPITEAAPIYEQLLTLFPTAAKYWKQYVEAHMAVNNDDATKQIFSRCLLNCLQIPLWRCYIRFIKMANESKGLEGQEETRKAFDFMLNYVGADIASGPIWMEYITFLKSLPAQSTQEESQRMTAVRKVYQKAIVTPTHHIEQLWRDYENFENSVSRQLAKGLLSEYQPKFNSARAVYRERKKYVDEIDWNMLAVPPSGSYKEEVQWMGWKRLLAFEKGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDIWYDYATWHAKSGSVDTAVKVFQRALKALPDSEMLRYAYAELEESRGAIQSAKKIYESLLGDDVNTTTLAHIQFIRFLRRTEGVEAARKYFLDARKSPNCTYHVYVAYAMMAFCLDKDREIAHNVFEAGLKRFMHEPLYILEYADFLTRLNDDRNIRALFERALSSLPPEESLEVWKRFAQFEQTYGDLASMLKVEQRRKEALSRTGEEGASALVGSLQDVVSRYSFMDLWPCSSKDLDHLARQEIIPRPVFSPSFQWLAKNMDRKVEKLALPNGPGSVDYAGLISNSTVSAKVVNPDVSKMVIYDPRQKSGIETLPSTTSSGVPAAYSNLSNPAAAIVGGGMTNAFDEILKATPPALVAFLASLPVVEGPTPDVDVVLSICLQSDIPAGQTGKLGTSSVQLSGGSAPTTSVLSGSSKSHPIPSAASFKTTRDRQAGKRKDLDRQEDDETATVQSQPLPRDVFRIRQIQKSRGGTTTIARGVTTSQTGSASYGSALSGDLSGSTG
SIO_010081: LOC121244528
subclass of: SO_0000673
so part of: LOC121244528
location: complement(join(723205..723392,724290..724511,725859..726032,726660..726755,726832..726934,727637..727789,734391..734450,734713..734809,735206..735270,735612..735752,736437..736505,736583..736641,736904..737024,737502..737565,738727..738773,739521..739649,739797..739937,740065..740126,741201..741301,742600..742709,743381..743443,743577..743657,743768..743782))
location: region:723205-743782:-1
so has part: feature:743768-743782:-1:exon
so has part: feature:743577-743657:-1:exon
so has part: feature:743381-743443:-1:exon
so has part: feature:742600-742709:-1:exon
so has part: feature:741201-741301:-1:exon
so has part: feature:740065-740126:-1:exon
so has part: feature:739797-739937:-1:exon
so has part: feature:739521-739649:-1:exon
so has part: feature:738727-738773:-1:exon
so has part: feature:737502-737565:-1:exon
so has part: feature:736904-737024:-1:exon
so has part: feature:736583-736641:-1:exon
so has part: feature:736437-736505:-1:exon
so has part: feature:735612-735752:-1:exon
so has part: feature:735206-735270:-1:exon
so has part: feature:734713-734809:-1:exon
so has part: feature:734391-734450:-1:exon
so has part: feature:727637-727789:-1:exon
so has part: feature:726832-726934:-1:exon
so has part: feature:726660-726755:-1:exon
so has part: feature:725859-726032:-1:exon
so has part: feature:724290-724511:-1:exon
so has part: feature:723205-723392:-1:exon

XP_040998572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:743768-743782:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743577-743657:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:743381-743443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:742600-742709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:741201-741301:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:740065-740126:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:739797-739937:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:739521-739649:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:738727-738773:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:737502-737565:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:736904-737024:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:736583-736641:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:736437-736505:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:735612-735752:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:735206-735270:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:734713-734809:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:734391-734450:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:727637-727789:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:726832-726934:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:726660-726755:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:725859-726032:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:724290-724511:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:723205-723392:-1:exon

LOC121244528
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244528
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulation factor subunit 77 isoform X1
translation: MSSTVDKTMGDSKALDDKYNVEAAEVLANEAQHLPITEAAPIYEQLLTLFPTAAKYWKQYVEAHMAVNNDDATKQIFSRCLLNCLQIPLWRCYIRFIKMANESKGLEGQEETRKAFDFMLNYVGADIASGPIWMEYITFLKSLPAQSTQEESQRMTAVRKVYQKAIVTPTHHIEQLWRDYENFENSVSRQLAKGLLSEYQPKFNSARAVYRERKKYVDEIDWNMLAVPPSGSYKEEVQWMGWKRLLAFEKGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDIWYDYATWHAKSGSVDTAVKVFQRALKALPDSEMLRYAYAELEESRGAIQSAKKIYESLLGDDVNTTTLAHIQFIRFLRRTEGVEAARKYFLDARKSPNCTYHVYVAYAMMAFCLDKDREIAHNVFEAGLKRFMHEPLYILEYADFLTRLNDDRNIRALFERALSSLPPEESLEVWKRFAQFEQTYGDLASMLKVEQRRKEALSRTGEEGASALVGSLQDVVSRYSFMDLWPCSSKDLDHLARQEIIPRPVFSPSFQWLAKNMDRKVEKLALPNGPGSVDKDYAGLISNSTVSAKVVNPDVSKMVIYDPRQKSGIETLPSTTSSGVPAAYSNLSNPAAAIVGGGMTNAFDEILKATPPALVAFLASLPVVEGPTPDVDVVLSICLQSDIPAGQTGKLGTSSVQLSGGSAPTTSVLSGSSKSHPIPSAASFKTTRDRQAGKRKDLDRQEDDETATVQSQPLPRDVFRIRQIQKSRGGTTTIARGVTTSQTGSASYGSALSGDLSGSTG
SIO_010081: LOC121244528
subclass of: SO_0000673
so part of: LOC121244528
location: complement(join(723205..723392,724290..724511,725859..726032,726660..726761,726832..726934,727637..727789,734391..734450,734713..734809,735206..735270,735612..735752,736437..736505,736583..736641,736904..737024,737502..737565,738727..738773,739521..739649,739797..739937,740065..740126,741201..741301,742600..742709,743381..743443,743577..743657,743768..743782))
location: region:723205-743782:-1
so has part: feature:743768-743782:-1:exon
so has part: feature:743577-743657:-1:exon
so has part: feature:743381-743443:-1:exon
so has part: feature:742600-742709:-1:exon
so has part: feature:741201-741301:-1:exon
so has part: feature:740065-740126:-1:exon
so has part: feature:739797-739937:-1:exon
so has part: feature:739521-739649:-1:exon
so has part: feature:738727-738773:-1:exon
so has part: feature:737502-737565:-1:exon
so has part: feature:736904-737024:-1:exon
so has part: feature:736583-736641:-1:exon
so has part: feature:736437-736505:-1:exon
so has part: feature:735612-735752:-1:exon
so has part: feature:735206-735270:-1:exon
so has part: feature:734713-734809:-1:exon
so has part: feature:734391-734450:-1:exon
so has part: feature:727637-727789:-1:exon
so has part: feature:726832-726934:-1:exon
so has part: feature:726660-726761:-1:exon
so has part: feature:725859-726032:-1:exon
so has part: feature:724290-724511:-1:exon
so has part: feature:723205-723392:-1:exon

XP_040998570.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:743768-743782:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743577-743657:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:743381-743443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:742600-742709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:741201-741301:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:740065-740126:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:739797-739937:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:739521-739649:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:738727-738773:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:737502-737565:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:736904-737024:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:736583-736641:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:736437-736505:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:735612-735752:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:735206-735270:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:734713-734809:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:734391-734450:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:727637-727789:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:726832-726934:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:726660-726761:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:725859-726032:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:724290-724511:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:723205-723392:-1:exon

LOC121244528
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244528
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulation factor subunit 77 isoform X4
translation: MGDSKALDDKYNVEAAEVLANEAQHLPITEAAPIYEQLLTLFPTAAKYWKQYVEAHMAVNNDDATKQIFSRCLLNCLQIPLWRCYIRFIKMANESKGLEGQEETRKAFDFMLNYVGADIASGPIWMEYITFLKSLPAQSTQEESQRMTAVRKVYQKAIVTPTHHIEQLWRDYENFENSVSRQLAKGLLSEYQPKFNSARAVYRERKKYVDEIDWNMLAVPPSGSYKEEVQWMGWKRLLAFEKGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDIWYDYATWHAKSGSVDTAVKVFQRALKALPDSEMLRYAYAELEESRGAIQSAKKIYESLLGDDVNTTTLAHIQFIRFLRRTEGVEAARKYFLDARKSPNCTYHVYVAYAMMAFCLDKDREIAHNVFEAGLKRFMHEPLYILEYADFLTRLNDDRNIRALFERALSSLPPEESLEVWKRFAQFEQTYGDLASMLKVEQRRKEALSRTGEEGASALVGSLQDVVSRYSFMDLWPCSSKDLDHLARQEIIPRPVFSPSFQWLAKNMDRKVEKLALPNGPGSVDKDYAGLISNSTVSAKVVNPDVSKMVIYDPRQKSGIETLPSTTSSGVPAAYSNLSNPAAAIVGGGMTNAFDEILKATPPALVAFLASLPVVEGPTPDVDVVLSICLQSDIPAGQTGKLGTSSVQLSGGSAPTTSVLSGSSKSHPIPSAASFKTTRDRQAGKRKDLDRQEDDETATVQSQPLPRDVFRIRQIQKSRGGTTTIARGVTTSQTGSASYGSALSGDLSGSTG
SIO_010081: LOC121244528
subclass of: SO_0000673
so part of: LOC121244528
location: complement(join(723205..723392,724290..724511,725859..726032,726660..726761,726832..726934,727637..727789,734391..734450,734713..734809,735206..735270,735612..735752,736437..736505,736583..736641,736904..737024,737502..737565,738727..738773,739521..739649,739797..739937,740065..740126,741201..741301,742600..742709,743381..743443,743577..743648))
location: region:723205-743648:-1
so has part: feature:743577-743648:-1:exon
so has part: feature:743381-743443:-1:exon
so has part: feature:742600-742709:-1:exon
so has part: feature:741201-741301:-1:exon
so has part: feature:740065-740126:-1:exon
so has part: feature:739797-739937:-1:exon
so has part: feature:739521-739649:-1:exon
so has part: feature:738727-738773:-1:exon
so has part: feature:737502-737565:-1:exon
so has part: feature:736904-737024:-1:exon
so has part: feature:736583-736641:-1:exon
so has part: feature:736437-736505:-1:exon
so has part: feature:735612-735752:-1:exon
so has part: feature:735206-735270:-1:exon
so has part: feature:734713-734809:-1:exon
so has part: feature:734391-734450:-1:exon
so has part: feature:727637-727789:-1:exon
so has part: feature:726832-726934:-1:exon
so has part: feature:726660-726761:-1:exon
so has part: feature:725859-726032:-1:exon
so has part: feature:724290-724511:-1:exon
so has part: feature:723205-723392:-1:exon

XP_040998573.1
type: Protein
SIO_000068: ncbiprotein

position:743648:-1
position: 743648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743577-743648:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743381-743443:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:742600-742709:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:741201-741301:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:740065-740126:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:739797-739937:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:739521-739649:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:738727-738773:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:737502-737565:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:736904-737024:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:736583-736641:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:736437-736505:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:735612-735752:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:735206-735270:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:734713-734809:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:734391-734450:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:727637-727789:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:726832-726934:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:726660-726761:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:725859-726032:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:724290-724511:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:723205-723392:-1:exon

LOC121244691
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244691
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 745689..754200
location: region:745689-754200:1
so has part: feature:745689-754200:1:exon
subclass of: SO_0000010

121244691
type: Gene
SIO_000068: ncbigene

position:745689:1
position: 745689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754200:1
position: 754200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:745689-754200:1:exon

LOC121244691
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244691
product: ras-related protein Rab7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 long SRA reads, 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_041142864.1
SIO_010081: LOC121244691
subclass of: SO_0000673
so part of: LOC121244691
location: join(745689..746073,746166..746192,746533..746632,746732..746878,753192..753272,753347..753492,753828..754200)
location: region:745689-754200:1
so has part: feature:745689-746073:1:exon
so has part: feature:746166-746192:1:exon
so has part: feature:746533-746632:1:exon
so has part: feature:746732-746878:1:exon
so has part: feature:753192-753272:1:exon
so has part: feature:753347-753492:1:exon
so has part: feature:753828-754200:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:745689-746073:1:exon

position:746073:1
position: 746073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:746166-746192:1:exon

position:746166:1
position: 746166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746192:1
position: 746192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:746533-746632:1:exon

position:746533:1
position: 746533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746632:1
position: 746632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:746732-746878:1:exon

position:746732:1
position: 746732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746878:1
position: 746878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:753192-753272:1:exon

position:753192:1
position: 753192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753272:1
position: 753272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:753347-753492:1:exon

position:753347:1
position: 753347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753492:1
position: 753492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:753828-754200:1:exon

position:753828:1
position: 753828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244691
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244691
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab7
translation: MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFTQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPANPRTFPFILLGNKIDVDGGNSRVVSEKKAKEWCASKGNIPYFETSAKEDYNVDPAFFSIGKTALANERDQDIYFQGIPEVASEAEQSGGCAC
SIO_010081: LOC121244691
subclass of: SO_0000673
so part of: LOC121244691
location: join(746021..746073,746166..746192,746533..746632,746732..746878,753192..753272,753347..753492,753828..753891)
location: region:746021-753891:1
so has part: feature:746021-746073:1:exon
so has part: feature:746166-746192:1:exon
so has part: feature:746533-746632:1:exon
so has part: feature:746732-746878:1:exon
so has part: feature:753192-753272:1:exon
so has part: feature:753347-753492:1:exon
so has part: feature:753828-753891:1:exon

XP_040998798.1
type: Protein
SIO_000068: ncbiprotein

position:746021:1
position: 746021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753891:1
position: 753891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:746021-746073:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:746166-746192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:746533-746632:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:746732-746878:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:753192-753272:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:753347-753492:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:753828-753891:1:exon

LOC121244367
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244367
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 757203..765257
location: region:757203-765257:1
so has part: feature:757203-765257:1:exon
subclass of: SO_0000010

121244367
type: Gene
SIO_000068: ncbigene

position:757203:1
position: 757203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:765257:1
position: 765257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757203-765257:1:exon

LOC121244367
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244367
product: uncharacterized LOC121244367, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 88 samples with support for all annotated introns
transcript id: XM_041142415.1
SIO_010081: LOC121244367
subclass of: SO_0000673
so part of: LOC121244367
location: join(757203..757421,757901..757952,758743..758816,759531..759632,761079..761222,762022..762073,763214..763287,764622..764711,764917..765257)
location: region:757203-765257:1
so has part: feature:757203-757421:1:exon
so has part: feature:757901-757952:1:exon
so has part: feature:758743-758816:1:exon
so has part: feature:759531-759632:1:exon
so has part: feature:761079-761222:1:exon
so has part: feature:762022-762073:1:exon
so has part: feature:763214-763287:1:exon
so has part: feature:764622-764711:1:exon
so has part: feature:764917-765257:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:757203-757421:1:exon

position:757421:1
position: 757421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:757901-757952:1:exon

position:757901:1
position: 757901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757952:1
position: 757952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:758743-758816:1:exon

position:758743:1
position: 758743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758816:1
position: 758816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:759531-759632:1:exon

position:759531:1
position: 759531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759632:1
position: 759632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:761079-761222:1:exon

position:761079:1
position: 761079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761222:1
position: 761222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:762022-762073:1:exon

position:762022:1
position: 762022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762073:1
position: 762073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:763214-763287:1:exon

position:763214:1
position: 763214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763287:1
position: 763287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:764622-764711:1:exon

position:764622:1
position: 764622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764711:1
position: 764711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:764917-765257:1:exon

position:764917:1
position: 764917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244367
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244367
product: uncharacterized LOC121244367, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 88 samples with support for all annotated introns
transcript id: XM_041142414.1
SIO_010081: LOC121244367
subclass of: SO_0000673
so part of: LOC121244367
location: join(757204..757421,757901..757952,758743..758816,759531..759632,761079..761222,762022..762073,763214..763287,764622..764711,764912..765257)
location: region:757204-765257:1
so has part: feature:757204-757421:1:exon
so has part: feature:757901-757952:1:exon
so has part: feature:758743-758816:1:exon
so has part: feature:759531-759632:1:exon
so has part: feature:761079-761222:1:exon
so has part: feature:762022-762073:1:exon
so has part: feature:763214-763287:1:exon
so has part: feature:764622-764711:1:exon
so has part: feature:764912-765257:1:exon

position:757204:1
position: 757204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757204-757421:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:757901-757952:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:758743-758816:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:759531-759632:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:761079-761222:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:762022-762073:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:763214-763287:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:764622-764711:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:764912-765257:1:exon

position:764912:1
position: 764912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244367
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244367
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121244367 isoform X1
translation: MANSLVTGLRTLFAVLCCAMVATLIFTIFVDGLPFRKELLTPWMAATLVDFYINVVPLAGWVLYKESTWLSAILWIILLACFGSITTCAYILMQFLKLSSQESLQDPMYYVLLRHTDKVNMEQKMKHSSVVTLRIVFVALGCLMTGTLLYTLLTDGSPFRKELFTPWMLATLIDFYINVVALSVWVYYKESNWISSIFWIILLISFGSITTCVYIAWKLFQLSPQDPAYLVLLSSGSRAENRYNGLHAETVQH
SIO_010081: LOC121244367
subclass of: SO_0000673
so part of: LOC121244367
location: join(757297..757421,757901..757952,758743..758816,759531..759632,761079..761222,762022..762073,763214..763287,764622..764711,764912..764960)
location: region:757297-764960:1
so has part: feature:757297-757421:1:exon
so has part: feature:757901-757952:1:exon
so has part: feature:758743-758816:1:exon
so has part: feature:759531-759632:1:exon
so has part: feature:761079-761222:1:exon
so has part: feature:762022-762073:1:exon
so has part: feature:763214-763287:1:exon
so has part: feature:764622-764711:1:exon
so has part: feature:764912-764960:1:exon

XP_040998348.1
type: Protein
SIO_000068: ncbiprotein

position:757297:1
position: 757297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764960:1
position: 764960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757297-757421:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:757901-757952:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:758743-758816:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:759531-759632:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:761079-761222:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:762022-762073:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:763214-763287:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:764622-764711:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:764912-764960:1:exon

LOC121244367
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244367
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121244367 isoform X2
translation: MANSLVTGLRTLFAVLCCAMVATLIFTIFVDGLPFRKELLTPWMAATLVDFYINVVPLAGWVLYKESTWLSAILWIILLACFGSITTCAYILMQFLKLSSQESLQDPMYYVLLRHTDKVNMEQKMKHSSVVTLRIVFVALGCLMTGTLLYTLLTDGSPFRKELFTPWMLATLIDFYINVVALSVWVYYKESNWISSIFWIILLISFGSITTCVYIAWKLFQLSPQDPAYLVLLSSGSRKQV
SIO_010081: LOC121244367
subclass of: SO_0000673
so part of: LOC121244367
location: join(757297..757421,757901..757952,758743..758816,759531..759632,761079..761222,762022..762073,763214..763287,764622..764711,764917..764929)
location: region:757297-764929:1
so has part: feature:757297-757421:1:exon
so has part: feature:757901-757952:1:exon
so has part: feature:758743-758816:1:exon
so has part: feature:759531-759632:1:exon
so has part: feature:761079-761222:1:exon
so has part: feature:762022-762073:1:exon
so has part: feature:763214-763287:1:exon
so has part: feature:764622-764711:1:exon
so has part: feature:764917-764929:1:exon

XP_040998349.1
type: Protein
SIO_000068: ncbiprotein

position:764929:1
position: 764929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757297-757421:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:757901-757952:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:758743-758816:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:759531-759632:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:761079-761222:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:762022-762073:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:763214-763287:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:764622-764711:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:764917-764929:1:exon

LOC121244367
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244367
product: uncharacterized LOC121244367, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_041142416.1
SIO_010081: LOC121244367
subclass of: SO_0000673
so part of: LOC121244367
location: join(757325..757421,757901..758576,758743..758816,759531..759632,761079..761222,762022..762073,763214..763287,764622..764711,764912..765257)
location: region:757325-765257:1
so has part: feature:757325-757421:1:exon
so has part: feature:757901-758576:1:exon
so has part: feature:758743-758816:1:exon
so has part: feature:759531-759632:1:exon
so has part: feature:761079-761222:1:exon
so has part: feature:762022-762073:1:exon
so has part: feature:763214-763287:1:exon
so has part: feature:764622-764711:1:exon
so has part: feature:764912-765257:1:exon

position:757325:1
position: 757325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757325-757421:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:757901-758576:1:exon

position:758576:1
position: 758576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:758743-758816:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:759531-759632:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:761079-761222:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:762022-762073:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:763214-763287:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:764622-764711:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:764912-765257:1:exon

LOC121244367
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244367
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121244367 isoform X3
translation: MVADTEVCGRFEGQTSKSEIVDWVMHLLFCCYVLSGWVLYKESTWLSAILWIILLACFGSITTCAYILMQFLKLSSQESLQDPMYYVLLRHTDKVNMEQKMKHSSVVTLRIVFVALGCLMTGTLLYTLLTDGSPFRKELFTPWMLATLIDFYINVVALSVWVYYKESNWISSIFWIILLISFGSITTCVYIAWKLFQLSPQDPAYLVLLSSGSRAENRYNGLHAETVQH
SIO_010081: LOC121244367
subclass of: SO_0000673
so part of: LOC121244367
location: join(758472..758576,758743..758816,759531..759632,761079..761222,762022..762073,763214..763287,764622..764711,764912..764960)
location: region:758472-764960:1
so has part: feature:758472-758576:1:exon
so has part: feature:758743-758816:1:exon
so has part: feature:759531-759632:1:exon
so has part: feature:761079-761222:1:exon
so has part: feature:762022-762073:1:exon
so has part: feature:763214-763287:1:exon
so has part: feature:764622-764711:1:exon
so has part: feature:764912-764960:1:exon

XP_040998350.1
type: Protein
SIO_000068: ncbiprotein

position:758472:1
position: 758472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:758472-758576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:758743-758816:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:759531-759632:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:761079-761222:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:762022-762073:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:763214-763287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:764622-764711:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:764912-764960:1:exon

LOC121244366
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244366
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(765266..768892)
location: region:765266-768892:-1
so has part: feature:765266-768892:-1:exon
subclass of: SO_0000010

121244366
type: Gene
SIO_000068: ncbigene

position:765266:-1
position: 765266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768892:-1
position: 768892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:765266-768892:-1:exon

LOC121244366
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244366
product: putative laccase-9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_041142413.1
SIO_010081: LOC121244366
subclass of: SO_0000673
so part of: LOC121244366
location: complement(join(765266..765674,765917..766275,766458..767052,767140..767265,767469..767713,768368..768519,768629..768892))
location: region:765266-768892:-1
so has part: feature:768629-768892:-1:exon
so has part: feature:768368-768519:-1:exon
so has part: feature:767469-767713:-1:exon
so has part: feature:767140-767265:-1:exon
so has part: feature:766458-767052:-1:exon
so has part: feature:765917-766275:-1:exon
so has part: feature:765266-765674:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:768629-768892:-1:exon

position:768629:-1
position: 768629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:768368-768519:-1:exon

position:768368:-1
position: 768368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768519:-1
position: 768519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:767469-767713:-1:exon

position:767469:-1
position: 767469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767713:-1
position: 767713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:767140-767265:-1:exon

position:767140:-1
position: 767140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767265:-1
position: 767265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:766458-767052:-1:exon

position:766458:-1
position: 766458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767052:-1
position: 767052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:765917-766275:-1:exon

position:765917:-1
position: 765917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766275:-1
position: 766275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:765266-765674:-1:exon

position:765674:-1
position: 765674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121244366
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244366
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative laccase-9
translation: MALTSGFVGIGLLLIICWMLLGLAQANMIHYYDFVLKETNFTRLCSSKSLLVVNESLPGPVIRVTKGDTVYVNVHNQGSYGVTIHWHGVHQPRNPWSDGPEYITQCPIEPSSNFTYEIIFSDEEGTLWWHAHSDWTRAGVHGAIVVLPSNSTGFPFPQPDAEEILVLGSWYKGDVNEEVAEDLEAGADTPRSNSYIINGQPGDFLPCSNQSTYKWRVDYGKTYLLRLVNAAMNAELYFAIAQHSLTVVGLDGSYLKPVETDFVMISPGQTMDILVKANQPLGQYYIAARQFDTARPDVTDYDQTNVTAILEYSGNYSTSSSTPIFPSSLPTYQDIKSALNFTNRLRSLANQDHPVNIPINITTRMYITVTMNNVVFDYEGVSRSALSSALNNVSWVNQDTDVLLAYYRNLSGFFTTDFPDFPPSFFNFTALDVPDNATDTVQGTKVKMLDYNEEVEIVFQGTNVFDASEDHPMHLHGYTFYVVGSGGGNFDNETDPKGYNLVDPPKMNTVSVPKNGWLALRFKASNPGVWLWHCHLDRHLSWGMNTVFIVRNGDTPETSIREPPPYLPPCTGSSPIQLLHFDNSNENKLNMIN
SIO_010081: LOC121244366
subclass of: SO_0000673
so part of: LOC121244366
location: complement(join(765475..765674,765917..766275,766458..767052,767140..767265,767469..767713,768368..768519,768629..768733))
location: region:765475-768733:-1
so has part: feature:768629-768733:-1:exon
so has part: feature:768368-768519:-1:exon
so has part: feature:767469-767713:-1:exon
so has part: feature:767140-767265:-1:exon
so has part: feature:766458-767052:-1:exon
so has part: feature:765917-766275:-1:exon
so has part: feature:765475-765674:-1:exon

XP_040998347.1
type: Protein
SIO_000068: ncbiprotein

position:765475:-1
position: 765475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768733:-1
position: 768733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:768629-768733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:768368-768519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:767469-767713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:767140-767265:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:766458-767052:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:765917-766275:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:765475-765674:-1:exon

LOC121245010
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121245010
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(774679..780593)
location: region:774679-780593:-1
so has part: feature:774679-780593:-1:exon
subclass of: SO_0000010

121245010
type: Gene
SIO_000068: ncbigene

position:774679:-1
position: 774679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780593:-1
position: 780593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:774679-780593:-1:exon

LOC121245010
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121245010
product: polyadenylate-binding protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_041143279.1
SIO_010081: LOC121245010
subclass of: SO_0000673
so part of: LOC121245010
location: complement(join(774679..775198,775568..775792,776304..776597,777544..777633,777742..777819,777994..778772,780079..780593))
location: region:774679-780593:-1
so has part: feature:780079-780593:-1:exon
so has part: feature:777994-778772:-1:exon
so has part: feature:777742-777819:-1:exon
so has part: feature:777544-777633:-1:exon
so has part: feature:776304-776597:-1:exon
so has part: feature:775568-775792:-1:exon
so has part: feature:774679-775198:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:780079-780593:-1:exon

position:780079:-1
position: 780079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:777994-778772:-1:exon

position:777994:-1
position: 777994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778772:-1
position: 778772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:777742-777819:-1:exon

position:777742:-1
position: 777742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777819:-1
position: 777819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:777544-777633:-1:exon

position:777544:-1
position: 777544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777633:-1
position: 777633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:776304-776597:-1:exon

position:776304:-1
position: 776304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:776597:-1
position: 776597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:775568-775792:-1:exon

position:775568:-1
position: 775568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775792:-1
position: 775792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:774679-775198:-1:exon

position:775198:-1
position: 775198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121245010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121245010
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyadenylate-binding protein 3-like
translation: MAADISAPSTSTSQPPPTPEAAIGVPANLALYVGDLDPSVDEGQLFDLFGQVATVVSIRVFRDHTRASSLGYAYVNYAHPHEAARALECLNYTLINGKPIRIMYSHRDSTIRRSGYANIFIKNLDTSIDNKALHDTFAAFGTVLSSKVVVDSNGQSKGHGYVQFENEESAQNAIKQLNGMLINDKKVYVGLFVRREERTQATGLSKFTNVYVKNLPETTTDEDLKKLFSSYGTITSAVVMTDTNGKSKCFGFVNFQSPDDAAVAVEKLNGATAFDDKVLFVGRAQSRGEREAELKEKFEQERISRYENSQGANLYLKNLDDNVNDDKLKELFSEFGTITSCKVMVDSQGHSKGYGFVAFSSPQEAAKALEEMNGKMIGRKPLYVAVAQRKEDRKAQLQAHFSQIRAHSGMAQMPAGIAGFHPGVPRFSPQHLYFGQSNPGLLPPQPYGFQQQLFHGMRPGIAPNFMMPYHLQRQGQPGQQMGVRRVGNLQQVQQQQIMHHNPHQGFRYVGSSRTGMDASVVSQGVIGPVMSLPFDGSGRPATPIDIQRPGHVHTSALLSALASASPENLRAMLGEQLYPHVEQLEPNNAAKVTGMLLEMDKSEVIHLLESPDALKQKVAEAMEVLHKAASVSGVSDQLGSLALND
SIO_010081: LOC121245010
subclass of: SO_0000673
so part of: LOC121245010
location: complement(join(774974..775198,775568..775792,776304..776597,777544..777633,777742..777819,777994..778772,780079..780325))
location: region:774974-780325:-1
so has part: feature:780079-780325:-1:exon
so has part: feature:777994-778772:-1:exon
so has part: feature:777742-777819:-1:exon
so has part: feature:777544-777633:-1:exon
so has part: feature:776304-776597:-1:exon
so has part: feature:775568-775792:-1:exon
so has part: feature:774974-775198:-1:exon

XP_040999213.1
type: Protein
SIO_000068: ncbiprotein

position:774974:-1
position: 774974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780325:-1
position: 780325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:780079-780325:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:777994-778772:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:777742-777819:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:777544-777633:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:776304-776597:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:775568-775792:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:774974-775198:-1:exon

LOC121244905
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 784425..786894
location: region:784425-786894:1
so has part: feature:784425-786894:1:exon
subclass of: SO_0000010

121244905
type: Gene
SIO_000068: ncbigene

position:784425:1
position: 784425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:786894:1
position: 786894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:784425-786894:1:exon

LOC121244905
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244905
product: DEAD-box ATP-dependent RNA helicase 39-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_041143146.1
SIO_010081: LOC121244905
subclass of: SO_0000673
so part of: LOC121244905
location: join(784425..785029,785753..785827,785929..786105,786209..786349,786424..786894)
location: region:784425-786894:1
so has part: feature:784425-785029:1:exon
so has part: feature:785753-785827:1:exon
so has part: feature:785929-786105:1:exon
so has part: feature:786209-786349:1:exon
so has part: feature:786424-786894:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:784425-785029:1:exon

position:785029:1
position: 785029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:785753-785827:1:exon

position:785753:1
position: 785753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785827:1
position: 785827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:785929-786105:1:exon

position:785929:1
position: 785929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:786105:1
position: 786105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:786209-786349:1:exon

position:786209:1
position: 786209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:786349:1
position: 786349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:786424-786894:1:exon

position:786424:1
position: 786424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244905
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244905
product: DEAD-box ATP-dependent RNA helicase 39-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 87 samples with support for all annotated introns
transcript id: XM_041143147.1
SIO_010081: LOC121244905
subclass of: SO_0000673
so part of: LOC121244905
location: join(784891..785029,785706..785827,785929..786105,786209..786349,786424..786894)
location: region:784891-786894:1
so has part: feature:784891-785029:1:exon
so has part: feature:785706-785827:1:exon
so has part: feature:785929-786105:1:exon
so has part: feature:786209-786349:1:exon
so has part: feature:786424-786894:1:exon

position:784891:1
position: 784891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:784891-785029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:785706-785827:1:exon

position:785706:1
position: 785706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:785929-786105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:786209-786349:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:786424-786894:1:exon

LOC121244905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DEAD-box ATP-dependent RNA helicase 39-like isoform X1
translation: MGAFVPTEIQCVGIPAVFEGKSVVMSAQPNSGRTLAYLLPLVQLMRRGPKPKHPQAVVLCATEELSDEVFHMAKFISSYAQLKSTKENGSPQKNLSNVPIGMIVGTPGEVLQHIEEGIVVLDEIKYLVLDEVDAMFGFGLGPDIQKIITPLRYHSSKSDDQGIQTILVTSTIAKILGKGLSPFLERLEHDQAGQIAAMLLEVDKTEAYHLTESLDALKKKVAEAIISLNPTGSES
SIO_010081: LOC121244905
subclass of: SO_0000673
so part of: LOC121244905
location: join(784901..785029,785753..785827,785929..786105,786209..786349,786424..786609)
location: region:784901-786609:1
so has part: feature:784901-785029:1:exon
so has part: feature:785753-785827:1:exon
so has part: feature:785929-786105:1:exon
so has part: feature:786209-786349:1:exon
so has part: feature:786424-786609:1:exon

XP_040999080.1
type: Protein
SIO_000068: ncbiprotein

position:784901:1
position: 784901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:786609:1
position: 786609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:784901-785029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:785753-785827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:785929-786105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:786209-786349:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:786424-786609:1:exon

LOC121244905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DEAD-box ATP-dependent RNA helicase 39-like isoform X2
translation: MRRGPKPKHPQAVVLCATEELSDEVFHMAKFISSYAQLKSTKENGSPQKNLSNVPIGMIVGTPGEVLQHIEEGIVVLDEIKYLVLDEVDAMFGFGLGPDIQKIITPLRYHSSKSDDQGIQTILVTSTIAKILGKGLSPFLERLEHDQAGQIAAMLLEVDKTEAYHLTESLDALKKKVAEAIISLNPTGSES
SIO_010081: LOC121244905
subclass of: SO_0000673
so part of: LOC121244905
location: join(785756..785827,785929..786105,786209..786349,786424..786609)
location: region:785756-786609:1
so has part: feature:785756-785827:1:exon
so has part: feature:785929-786105:1:exon
so has part: feature:786209-786349:1:exon
so has part: feature:786424-786609:1:exon

XP_040999081.1
type: Protein
SIO_000068: ncbiprotein

position:785756:1
position: 785756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:785756-785827:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:785929-786105:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:786209-786349:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:786424-786609:1:exon

LOC121244587
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244587
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 787841..794083
location: region:787841-794083:1
so has part: feature:787841-794083:1:exon
subclass of: SO_0000010

121244587
type: Gene
SIO_000068: ncbigene

position:787841:1
position: 787841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:794083:1
position: 794083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:787841-794083:1:exon

LOC121244587
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244587
product: DEAD-box ATP-dependent RNA helicase 39-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_041142728.1
SIO_010081: LOC121244587
subclass of: SO_0000673
so part of: LOC121244587
location: join(787841..788482,789081..789175,789261..789449,789653..789793,790147..790287,791382..791524,792652..792781,792908..792956,793516..794083)
location: region:787841-794083:1
so has part: feature:787841-788482:1:exon
so has part: feature:789081-789175:1:exon
so has part: feature:789261-789449:1:exon
so has part: feature:789653-789793:1:exon
so has part: feature:790147-790287:1:exon
so has part: feature:791382-791524:1:exon
so has part: feature:792652-792781:1:exon
so has part: feature:792908-792956:1:exon
so has part: feature:793516-794083:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:787841-788482:1:exon

position:788482:1
position: 788482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:789081-789175:1:exon

position:789081:1
position: 789081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789175:1
position: 789175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:789261-789449:1:exon

position:789261:1
position: 789261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789449:1
position: 789449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:789653-789793:1:exon

position:789653:1
position: 789653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789793:1
position: 789793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:790147-790287:1:exon

position:790147:1
position: 790147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790287:1
position: 790287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:791382-791524:1:exon

position:791382:1
position: 791382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:791524:1
position: 791524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:792652-792781:1:exon

position:792652:1
position: 792652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:792781:1
position: 792781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:792908-792956:1:exon

position:792908:1
position: 792908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:792956:1
position: 792956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:793516-794083:1:exon

position:793516:1
position: 793516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244587
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244587
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 39-like
translation: MGGTARTLLALSLSSNLFALSRLSPAPKRFSLPKTARVFVGFRPLCTTITPTTPTTSLAEPEQMKHSILLERLRLRHLKESAKPPQTRNPKSASAAGSENEDGSKKKKTGKREVESFEELGLSEEAMGAVRELGIEVPTEIQSIGIPAVFEGKSVVLGSHTGSGKTLAYMLPLVQLLRRDEALFGMLTRPRXPRAVVLCPTRELSEQVFRVAKSIGHHARFRCTMVSGGGRLRPQEDSLNNPIDMVVGTPGRVLQHIEEGNIVYGDIKYLVLDEADTMFDRGFGPEIRKFLGPLKNRASKADSEGFQTILVTATMTKAVQTLIDEEFEGIVHLRTSTLHKKVASARHDFIKLSGSENKMEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAEQRVENLNRFKSNEGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDLLLATRIEEAMRKNESLESLTTDHVRRDVARARITGNKVMNAKSLKVSQQKNKVVAKGKKTSAPAKSTKPAVQVSKSIKSSTASTSRKPSSGGKKQTASRRSSSVQSTTTKLSVVGFRGRNSWTNKKGATVSR
SIO_010081: LOC121244587
subclass of: SO_0000673
so part of: LOC121244587
location: join(787958..788482,789081..789175,789261..789449,789653..789793,790147..790287,791382..791524,792652..792781,792908..792956,793516..793949)
location: region:787958-793949:1
so has part: feature:787958-788482:1:exon
so has part: feature:789081-789175:1:exon
so has part: feature:789261-789449:1:exon
so has part: feature:789653-789793:1:exon
so has part: feature:790147-790287:1:exon
so has part: feature:791382-791524:1:exon
so has part: feature:792652-792781:1:exon
so has part: feature:792908-792956:1:exon
so has part: feature:793516-793949:1:exon

XP_040998662.1
type: Protein
SIO_000068: ncbiprotein

position:787958:1
position: 787958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793949:1
position: 793949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:787958-788482:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:789081-789175:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:789261-789449:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:789653-789793:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:790147-790287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:791382-791524:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:792652-792781:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:792908-792956:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:793516-793949:1:exon

LOC121244982
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244982
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 796129..797921
location: region:796129-797921:1
so has part: feature:796129-797921:1:exon
subclass of: SO_0000010

121244982
type: Gene
SIO_000068: ncbigene

position:796129:1
position: 796129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:797921:1
position: 797921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:796129-797921:1:exon

LOC121244982
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244982
product: uncharacterized LOC121244982
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_041143239.1
SIO_010081: LOC121244982
subclass of: SO_0000673
so part of: LOC121244982
location: join(796129..796734,797797..797921)
location: region:796129-797921:1
so has part: feature:796129-796734:1:exon
so has part: feature:797797-797921:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:796129-796734:1:exon

position:796734:1
position: 796734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:797797-797921:1:exon

position:797797:1
position: 797797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244982
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244982
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121244982
translation: MHHRAQISLCKSFSRYPFQRSLIPSSSSSLNSLAMISTQLVSGSVPFRRPEFNVTPTSNFHHFRYPTLSKSIVQLMKYSAQSGGSVAEFDQNREVDMINLKFAEAREEIEMAMESKETVYFDEEAECARAAVKEVLDMFNGLLAKLPESERAALQRSMGLKIEQLKAELQQLNE
SIO_010081: LOC121244982
subclass of: SO_0000673
so part of: LOC121244982
location: 796206..796730
location: region:796206-796730:1
so has part: feature:796206-796730:1:exon

XP_040999173.1
type: Protein
SIO_000068: ncbiprotein

position:796206:1
position: 796206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796730:1
position: 796730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:796206-796730:1:exon

LOC121243851
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121243851
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(801334..805784)
location: region:801334-805784:-1
so has part: feature:801334-805784:-1:exon
subclass of: SO_0000010

121243851
type: Gene
SIO_000068: ncbigene

position:801334:-1
position: 801334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:805784:-1
position: 805784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:801334-805784:-1:exon

LOC121243851
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121243851
product: LRR receptor-like serine/threonine-protein kinase RGI5
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041141918.1
SIO_010081: LOC121243851
subclass of: SO_0000673
so part of: LOC121243851
location: complement(join(801334..801968,802407..805784))
location: region:801334-805784:-1
so has part: feature:802407-805784:-1:exon
so has part: feature:801334-801968:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:802407-805784:-1:exon

position:802407:-1
position: 802407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:801334-801968:-1:exon

position:801968:-1
position: 801968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121243851
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121243851
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: LRR receptor-like serine/threonine-protein kinase RGI5
translation: MARMKNITHFVTFSSFFFYLTMIKTLLVTSLSSDGQALLSLLSVADPSAKASSSILSSWNPSSPTPCTWQGITCSPQNRVISLSLPDTFLNLSSLPPQLFSLSSLQLLNLSSINVSGIIPPXFGKLTYLRLIDLSSNSLTGPIPPELGTLSTLQFLFLNSNKLSGRIPQQLANLTSLEVLCLQDNLLNGSIPSQLGSLVSLQEFRIGGNPYLTGVIPAQLGLLINLTTFGAAATGLSGVIPPTFGNLINLQTLALYETDVFGSIPPELGLCSELRNLYLHMNKLTGPIPPQLSKLQKLTSLLLWGNALSGPIPAELSNCSSLVVFDVSANDISGEIPGDXGKLVVLEQLHLSDNELTGKIPWQLSNCTSLTAIQLDKNQLSGTIPWQVGNLKFLQSFFLWGNSVTGTIPSSFRNCTELYALDLSRNKLTGSIPEEIFGLKKLSKLLLLGNSLSGGLPRSVANCRSLVRLRLGENQLSGQIPKEIGQLQNLVFLDLYMNHFSGGLPGEIANITVLELLDMHNNYITGEIPSQLGELVNLELLDLSRNSFTGRIPWSFGNFSYLNKLIINNNLLTGSIPTSVRNLQKLTLLDLSYNSLSDAIPPEIGYVKSLTISLDLSFNGLTGEIPETMASLTQLQSLDLSHNMLYGKIKVLSSLTSLTSLNISYNNFSGPIPVTPFFRTLSLNSYLQNLNLCESIDGSTCSTSLIRRNGLKSFKPVALILVILASVTILVLASWILLMRNPKYMVEKSSGTSISSPGAEDFSYPWTFIPFQKLNFSINNILGCLKDENVIGKGCSGVVYKAEMPIGERIAVKKLWKTKRDEEPVDSFTAEIQILGHIRHRNIVKLLGYCYNKSFKLLLYNYISNGNLKQLLQGNRNLDWETRYKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKFEAYLADFGLAKLMNSPNYNHAMSRVAGSYEYGYAMNITEKSDVYSYGVVLLEILSGRSAVEPHVGDGLHIVEWVKKKMRSFEPAVSVLDAKLQGLADQIVQEMLQTLGIAMFCVNSSPAERPTMKEVVTLLMEVKSPPEEWGKTSQPLIKQSSNQS
SIO_010081: LOC121243851
subclass of: SO_0000673
so part of: LOC121243851
location: complement(join(801586..801968,802407..805255))
location: region:801586-805255:-1
so has part: feature:802407-805255:-1:exon
so has part: feature:801586-801968:-1:exon

XP_040997852.1
type: Protein
SIO_000068: ncbiprotein

position:801586:-1
position: 801586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:805255:-1
position: 805255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:802407-805255:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:801586-801968:-1:exon

LOC121243850
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121243850
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(807129..811477)
location: region:807129-811477:-1
so has part: feature:807129-811477:-1:exon
subclass of: SO_0000010

121243850
type: Gene
SIO_000068: ncbigene

position:807129:-1
position: 807129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811477:-1
position: 811477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:807129-811477:-1:exon

LOC121243850
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121243850
product: putative lysine-specific demethylase JMJ16, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_041141917.1
SIO_010081: LOC121243850
subclass of: SO_0000673
so part of: LOC121243850
location: complement(join(807129..807748,807894..807983,808130..808702,811125..811477))
location: region:807129-811477:-1
so has part: feature:811125-811477:-1:exon
so has part: feature:808130-808702:-1:exon
so has part: feature:807894-807983:-1:exon
so has part: feature:807129-807748:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:811125-811477:-1:exon

position:811125:-1
position: 811125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:808130-808702:-1:exon

position:808130:-1
position: 808130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808702:-1
position: 808702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:807894-807983:-1:exon

position:807894:-1
position: 807894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807983:-1
position: 807983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:807129-807748:-1:exon

position:807748:-1
position: 807748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121243850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121243850
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative lysine-specific demethylase JMJ16
translation: MESLFFFFLVENASYGGTLFLLQDLPKTCLPKGVIRGWPDCNDCLKYFEQVTARWRPEEAGRSIIEEAPVFYPTEEEFEDSAEYIPSIRPKAEAYGICRLVLPPSWQPPCLIKEKNICEDSTFVTHIRRIDGLQNQYSQSKIARFHGNMKGKRRSLRISSKNGYSGEDTTNPYDVESFEPDQ
SIO_010081: LOC121243850
subclass of: SO_0000673
so part of: LOC121243850
location: complement(join(807428..807748,807894..807983,808130..808267))
location: region:807428-808267:-1
so has part: feature:808130-808267:-1:exon
so has part: feature:807894-807983:-1:exon
so has part: feature:807428-807748:-1:exon

XP_040997851.1
type: Protein
SIO_000068: ncbiprotein

position:807428:-1
position: 807428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808267:-1
position: 808267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808130-808267:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:807894-807983:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:807428-807748:-1:exon

LOC121243850
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2249226
gene: LOC121243850
product: putative lysine-specific demethylase JMJ16, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XR_005936308.1
SIO_010081: LOC121243850
so part of: LOC121243850
location: complement(join(807691..807748,807894..808025,808130..808198,808631..808702,811125..811477))
location: region:807691-811477:-1
so has part: feature:811125-811477:-1:exon
so has part: feature:808631-808702:-1:exon
so has part: feature:808130-808198:-1:exon
so has part: feature:807894-808025:-1:exon
so has part: feature:807691-807748:-1:exon

position:807691:-1
position: 807691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:811125-811477:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:808631-808702:-1:exon

position:808631:-1
position: 808631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:808130-808198:-1:exon

position:808198:-1
position: 808198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:807894-808025:-1:exon

position:808025:-1
position: 808025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:807691-807748:-1:exon

LOC121243850
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2249226
gene: LOC121243850
product: putative lysine-specific demethylase JMJ16, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XR_005936307.1
SIO_010081: LOC121243850
so part of: LOC121243850
location: complement(join(807691..807748,807894..808198,808631..808702,811125..811477))
location: region:807691-811477:-1
so has part: feature:811125-811477:-1:exon
so has part: feature:808631-808702:-1:exon
so has part: feature:807894-808198:-1:exon
so has part: feature:807691-807748:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:811125-811477:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:808631-808702:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:807894-808198:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:807691-807748:-1:exon

LOC121244951
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244951
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 822788..830852
location: region:822788-830852:1
so has part: feature:822788-830852:1:exon
subclass of: SO_0000010

121244951
type: Gene
SIO_000068: ncbigene

position:822788:1
position: 822788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:830852:1
position: 830852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:822788-830852:1:exon

LOC121244951
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244951
product: type IV inositol polyphosphate 5-phosphatase 3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_041143203.1
SIO_010081: LOC121244951
subclass of: SO_0000673
so part of: LOC121244951
location: join(822788..822971,823121..823232,823680..823737,824852..824926,825045..825149,826717..827575,827839..828059,828539..828647,829049..829191,830077..830311,830461..830852)
location: region:822788-830852:1
so has part: feature:822788-822971:1:exon
so has part: feature:823121-823232:1:exon
so has part: feature:823680-823737:1:exon
so has part: feature:824852-824926:1:exon
so has part: feature:825045-825149:1:exon
so has part: feature:826717-827575:1:exon
so has part: feature:827839-828059:1:exon
so has part: feature:828539-828647:1:exon
so has part: feature:829049-829191:1:exon
so has part: feature:830077-830311:1:exon
so has part: feature:830461-830852:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:822788-822971:1:exon

position:822971:1
position: 822971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:823121-823232:1:exon

position:823121:1
position: 823121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:823232:1
position: 823232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:823680-823737:1:exon

position:823680:1
position: 823680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:823737:1
position: 823737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:824852-824926:1:exon

position:824852:1
position: 824852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:824926:1
position: 824926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:825045-825149:1:exon

position:825045:1
position: 825045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:825149:1
position: 825149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:826717-827575:1:exon

position:826717:1
position: 826717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827575:1
position: 827575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:827839-828059:1:exon

position:827839:1
position: 827839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:828059:1
position: 828059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:828539-828647:1:exon

position:828539:1
position: 828539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:828647:1
position: 828647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:829049-829191:1:exon

position:829049:1
position: 829049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:829191:1
position: 829191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:830077-830311:1:exon

position:830077:1
position: 830077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:830311:1
position: 830311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:830461-830852:1:exon

position:830461:1
position: 830461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244951
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244951
product: type IV inositol polyphosphate 5-phosphatase 3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_041143204.1
SIO_010081: LOC121244951
subclass of: SO_0000673
so part of: LOC121244951
location: join(822790..822971,823121..823232,823680..823737,824852..824926,825045..825149,826717..827575,827875..828059,828539..828647,829049..829191,830077..830311,830461..830852)
location: region:822790-830852:1
so has part: feature:822790-822971:1:exon
so has part: feature:823121-823232:1:exon
so has part: feature:823680-823737:1:exon
so has part: feature:824852-824926:1:exon
so has part: feature:825045-825149:1:exon
so has part: feature:826717-827575:1:exon
so has part: feature:827875-828059:1:exon
so has part: feature:828539-828647:1:exon
so has part: feature:829049-829191:1:exon
so has part: feature:830077-830311:1:exon
so has part: feature:830461-830852:1:exon

position:822790:1
position: 822790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:822790-822971:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:823121-823232:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823680-823737:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:824852-824926:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:825045-825149:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:826717-827575:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:827875-828059:1:exon

position:827875:1
position: 827875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:828539-828647:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:829049-829191:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:830077-830311:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:830461-830852:1:exon

LOC121244951
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244951
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type IV inositol polyphosphate 5-phosphatase 3-like isoform X1
translation: MKQRSKHQPELFWPSVVMRKWLNISAKDFSADEDDCDIDSGSDSEGEGFRQQGRESRLRGNKGDDPQDALPRSRRRNSETFRAQYIDTEELRICVVTWNVGGKLPPEDLDIDDWLHVNEPADMYVMGLQEIVPLNAGNIFGAEDNRPVPRWENIIRETLNRVRPKATTTKSFSDPPSPSKFKPSDDIPDIEEEMLLESDSDVGEEVHPLDEEPNDFDGGKDRPITDQQNKFVSFGVSDCPGSVKLGLPGEELQRQFSSPKRLDRLNCLRTEQSEDVETSVSQNSGKLTRMLSGCERIGLSWPEPPLNLLSQCVLERPNSFRSIRSFRASQSFRTYGSFKSTKNEVPSQIALLAEIDLESLLKRKRRSSYVRIVSKQMVGIFLTIWVRRSLRRHIQNLKVSTVGVGVMGYIGNKSFRFQDSSSIFQGSISVSMSIHQTLFCFICTHLTSGEKEGDELKRNADVREIHRRTHFHSLSDIRLPRTINDHERIIWLGDLNYRINLSYEKTREFISKKKWSKLVEKDQLIRELKKGRAFDGWSEGTLNFPPTYKYEINSENYYGEDPKVGRRTPAWCDRILSYGKGMRLLSYRRTELKLSDHRPVTATYMAEVEVFSHRKLQKALTLTDAETESEDVIANMGIDVGMSCLRFGEDIPDRDR
SIO_010081: LOC121244951
subclass of: SO_0000673
so part of: LOC121244951
location: join(822942..822971,823121..823232,823680..823737,824852..824926,825045..825149,826717..827575,827839..828059,828539..828647,829049..829191,830077..830311,830461..830484)
location: region:822942-830484:1
so has part: feature:822942-822971:1:exon
so has part: feature:823121-823232:1:exon
so has part: feature:823680-823737:1:exon
so has part: feature:824852-824926:1:exon
so has part: feature:825045-825149:1:exon
so has part: feature:826717-827575:1:exon
so has part: feature:827839-828059:1:exon
so has part: feature:828539-828647:1:exon
so has part: feature:829049-829191:1:exon
so has part: feature:830077-830311:1:exon
so has part: feature:830461-830484:1:exon

XP_040999137.1
type: Protein
SIO_000068: ncbiprotein

position:822942:1
position: 822942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:830484:1
position: 830484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:822942-822971:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:823121-823232:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823680-823737:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:824852-824926:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:825045-825149:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:826717-827575:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:827839-828059:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:828539-828647:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:829049-829191:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:830077-830311:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:830461-830484:1:exon

LOC121244951
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244951
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type IV inositol polyphosphate 5-phosphatase 3-like isoform X2
translation: MKQRSKHQPELFWPSVVMRKWLNISAKDFSADEDDCDIDSGSDSEGEGFRQQGRESRLRGNKGDDPQDALPRSRRRNSETFRAQYIDTEELRICVVTWNVGGKLPPEDLDIDDWLHVNEPADMYVMGLQEIVPLNAGNIFGAEDNRPVPRWENIIRETLNRVRPKATTTKSFSDPPSPSKFKPSDDIPDIEEEMLLESDSDVGEEVHPLDEEPNDFDGGKDRPITDQQNKFVSFGVSDCPGSVKLGLPGEELQRQFSSPKRLDRLNCLRTEQSEDVETSVSQNSGKLTRMLSGCERIGLSWPEPPLNLLSQCVLERPNSFRSIRSFRASQSFRTYGSFKSTKNEVPSQIALLAEIDLESLLKRKRRSSYVRIVSKQMVGIFLTIWVRRSLRRHIQNLKVSTVGVGVMGYIGNKGSISVSMSIHQTLFCFICTHLTSGEKEGDELKRNADVREIHRRTHFHSLSDIRLPRTINDHERIIWLGDLNYRINLSYEKTREFISKKKWSKLVEKDQLIRELKKGRAFDGWSEGTLNFPPTYKYEINSENYYGEDPKVGRRTPAWCDRILSYGKGMRLLSYRRTELKLSDHRPVTATYMAEVEVFSHRKLQKALTLTDAETESEDVIANMGIDVGMSCLRFGEDIPDRDR
SIO_010081: LOC121244951
subclass of: SO_0000673
so part of: LOC121244951
location: join(822942..822971,823121..823232,823680..823737,824852..824926,825045..825149,826717..827575,827875..828059,828539..828647,829049..829191,830077..830311,830461..830484)
location: region:822942-830484:1
so has part: feature:822942-822971:1:exon
so has part: feature:823121-823232:1:exon
so has part: feature:823680-823737:1:exon
so has part: feature:824852-824926:1:exon
so has part: feature:825045-825149:1:exon
so has part: feature:826717-827575:1:exon
so has part: feature:827875-828059:1:exon
so has part: feature:828539-828647:1:exon
so has part: feature:829049-829191:1:exon
so has part: feature:830077-830311:1:exon
so has part: feature:830461-830484:1:exon

XP_040999138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:822942-822971:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:823121-823232:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823680-823737:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:824852-824926:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:825045-825149:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:826717-827575:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:827875-828059:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:828539-828647:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:829049-829191:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:830077-830311:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:830461-830484:1:exon

LOC121244995
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244995
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(833130..853034)
location: region:833130-853034:-1
so has part: feature:833130-853034:-1:exon
subclass of: SO_0000010

121244995
type: Gene
SIO_000068: ncbigene

position:833130:-1
position: 833130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853034:-1
position: 853034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:833130-853034:-1:exon

LOC121244995
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2249226
gene: LOC121244995
product: probable choline kinase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_005936520.1
SIO_010081: LOC121244995
so part of: LOC121244995
location: complement(join(833130..833211,833362..833504,849653..849715,849932..849979,850097..850214,850718..850913,851015..851136,852124..852516,852778..853034))
location: region:833130-853034:-1
so has part: feature:852778-853034:-1:exon
so has part: feature:852124-852516:-1:exon
so has part: feature:851015-851136:-1:exon
so has part: feature:850718-850913:-1:exon
so has part: feature:850097-850214:-1:exon
so has part: feature:849932-849979:-1:exon
so has part: feature:849653-849715:-1:exon
so has part: feature:833362-833504:-1:exon
so has part: feature:833130-833211:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:852778-853034:-1:exon

position:852778:-1
position: 852778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:852124-852516:-1:exon

position:852124:-1
position: 852124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852516:-1
position: 852516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:851015-851136:-1:exon

position:851015:-1
position: 851015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:851136:-1
position: 851136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:850718-850913:-1:exon

position:850718:-1
position: 850718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850913:-1
position: 850913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:850097-850214:-1:exon

position:850097:-1
position: 850097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850214:-1
position: 850214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:849932-849979:-1:exon

position:849932:-1
position: 849932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:849979:-1
position: 849979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:849653-849715:-1:exon

position:849653:-1
position: 849653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:849715:-1
position: 849715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:833362-833504:-1:exon

position:833362:-1
position: 833362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833504:-1
position: 833504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:833130-833211:-1:exon

position:833211:-1
position: 833211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121244995
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244995
product: probable choline kinase 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_041143258.1
SIO_010081: LOC121244995
subclass of: SO_0000673
so part of: LOC121244995
location: complement(join(833227..833504,849653..849715,849932..849979,850097..850214,850718..850913,851015..851136,852124..852516,852778..853034))
location: region:833227-853034:-1
so has part: feature:852778-853034:-1:exon
so has part: feature:852124-852516:-1:exon
so has part: feature:851015-851136:-1:exon
so has part: feature:850718-850913:-1:exon
so has part: feature:850097-850214:-1:exon
so has part: feature:849932-849979:-1:exon
so has part: feature:849653-849715:-1:exon
so has part: feature:833227-833504:-1:exon

position:833227:-1
position: 833227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:852778-853034:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:852124-852516:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:851015-851136:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:850718-850913:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:850097-850214:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:849932-849979:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:849653-849715:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:833227-833504:-1:exon

LOC121244995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244995
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable choline kinase 2 isoform X2
translation: MGITTRDFVEDRLPEELKKVLRSVAANWGDVMDDLEALEVIKLNGAMTNEVYQINWPAKNSGVGRKVLVRVYGEGVEVFFNRDDEIRTFECISKQGKGPRLLGRFPDGRVEEFIHARTLSAADLRDPEISALIAAKMREFHNLPVPGPKNLLIWDRLRNWLCVAKSLCSSHDTQDFCLDTLGMEISMLEKELSQDYQEVGFCHNDLQYGNIMMDEETRSLTLIDYEYASYNPIAYDIANHFCEMAANYHSQTPHVLDYSQYPDLEERQRFVRIYLSSAGVWTPNPAINFAWDSALFNLQCHMPVEA
SIO_010081: LOC121244995
subclass of: SO_0000673
so part of: LOC121244995
location: complement(join(833482..833504,849653..849715,849932..849979,850097..850214,850718..850913,851015..851136,852124..852474))
location: region:833482-852474:-1
so has part: feature:852124-852474:-1:exon
so has part: feature:851015-851136:-1:exon
so has part: feature:850718-850913:-1:exon
so has part: feature:850097-850214:-1:exon
so has part: feature:849932-849979:-1:exon
so has part: feature:849653-849715:-1:exon
so has part: feature:833482-833504:-1:exon

XP_040999192.1
type: Protein
SIO_000068: ncbiprotein

position:833482:-1
position: 833482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852474:-1
position: 852474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:852124-852474:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:851015-851136:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:850718-850913:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:850097-850214:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:849932-849979:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:849653-849715:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:833482-833504:-1:exon

LOC121244995
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244995
product: probable choline kinase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_041143257.1
SIO_010081: LOC121244995
subclass of: SO_0000673
so part of: LOC121244995
location: complement(join(848763..849063,849147..849247,849932..849979,850097..850214,850718..850913,851015..851136,852124..852486,852778..853032))
location: region:848763-853032:-1
so has part: feature:852778-853032:-1:exon
so has part: feature:852124-852486:-1:exon
so has part: feature:851015-851136:-1:exon
so has part: feature:850718-850913:-1:exon
so has part: feature:850097-850214:-1:exon
so has part: feature:849932-849979:-1:exon
so has part: feature:849147-849247:-1:exon
so has part: feature:848763-849063:-1:exon

position:848763:-1
position: 848763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853032:-1
position: 853032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:852778-853032:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:852124-852486:-1:exon

position:852486:-1
position: 852486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:851015-851136:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:850718-850913:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:850097-850214:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:849932-849979:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:849147-849247:-1:exon

position:849147:-1
position: 849147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:849247:-1
position: 849247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:848763-849063:-1:exon

position:849063:-1
position: 849063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121244995
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244995
product: probable choline kinase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 long SRA reads, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_041143256.1
SIO_010081: LOC121244995
subclass of: SO_0000673
so part of: LOC121244995
location: complement(join(848763..849063,849147..849247,849932..849979,850097..850214,850718..850913,851015..851136,852124..852516,852778..853032))
location: region:848763-853032:-1
so has part: feature:852778-853032:-1:exon
so has part: feature:852124-852516:-1:exon
so has part: feature:851015-851136:-1:exon
so has part: feature:850718-850913:-1:exon
so has part: feature:850097-850214:-1:exon
so has part: feature:849932-849979:-1:exon
so has part: feature:849147-849247:-1:exon
so has part: feature:848763-849063:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:852778-853032:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:852124-852516:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:851015-851136:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:850718-850913:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:850097-850214:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:849932-849979:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:849147-849247:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:848763-849063:-1:exon

LOC121244995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244995
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable choline kinase 1 isoform X1
translation: MGITTRDFVEDRLPEELKKVLRSVAANWGDVMDDLEALEVIKLNGAMTNEVYQINWPAKNSGVGRKVLVRVYGEGVEVFFNRDDEIRTFECISKQGKGPRLLGRFPDGRVEEFIHARTLSAADLRDPEISALIAAKMREFHNLPVPGPKNLLIWDRLRNWLCVAKSLCSSHDTQDFCLDTLGMEISMLEKELSQDYQEVGFCHNDLQYGNIMMDEETRSLTLIDYEYASYNPIAYDIANHFCEMAANYHSQTPHVLDYSQYPDLEERQRFVRIYLSSAGNQPSDAKVEQFVQDVEKYTLANHLFWGLWGIISAYVNKINFDYKEYARQRFGQYWLRKPALLGSSGKPQEDI
SIO_010081: LOC121244995
subclass of: SO_0000673
so part of: LOC121244995
location: complement(join(848944..849063,849147..849247,849932..849979,850097..850214,850718..850913,851015..851136,852124..852474))
location: region:848944-852474:-1
so has part: feature:852124-852474:-1:exon
so has part: feature:851015-851136:-1:exon
so has part: feature:850718-850913:-1:exon
so has part: feature:850097-850214:-1:exon
so has part: feature:849932-849979:-1:exon
so has part: feature:849147-849247:-1:exon
so has part: feature:848944-849063:-1:exon

XP_040999190.1
type: Protein
SIO_000068: ncbiprotein

position:848944:-1
position: 848944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:852124-852474:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:851015-851136:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:850718-850913:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:850097-850214:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:849932-849979:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:849147-849247:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:848944-849063:-1:exon

LOC121244995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244995
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable choline kinase 1 isoform X1
translation: MGITTRDFVEDRLPEELKKVLRSVAANWGDVMDDLEALEVIKLNGAMTNEVYQINWPAKNSGVGRKVLVRVYGEGVEVFFNRDDEIRTFECISKQGKGPRLLGRFPDGRVEEFIHARTLSAADLRDPEISALIAAKMREFHNLPVPGPKNLLIWDRLRNWLCVAKSLCSSHDTQDFCLDTLGMEISMLEKELSQDYQEVGFCHNDLQYGNIMMDEETRSLTLIDYEYASYNPIAYDIANHFCEMAANYHSQTPHVLDYSQYPDLEERQRFVRIYLSSAGNQPSDAKVEQFVQDVEKYTLANHLFWGLWGIISAYVNKINFDYKEYARQRFGQYWLRKPALLGSSGKPQEDI
SIO_010081: LOC121244995
subclass of: SO_0000673
so part of: LOC121244995
location: complement(join(848944..849063,849147..849247,849932..849979,850097..850214,850718..850913,851015..851136,852124..852474))
location: region:848944-852474:-1
so has part: feature:852124-852474:-1:exon
so has part: feature:851015-851136:-1:exon
so has part: feature:850718-850913:-1:exon
so has part: feature:850097-850214:-1:exon
so has part: feature:849932-849979:-1:exon
so has part: feature:849147-849247:-1:exon
so has part: feature:848944-849063:-1:exon

XP_040999191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:852124-852474:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:851015-851136:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:850718-850913:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:850097-850214:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:849932-849979:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:849147-849247:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:848944-849063:-1:exon

LOC121244995
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2249226
gene: LOC121244995
product: probable choline kinase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_005936519.1
SIO_010081: LOC121244995
so part of: LOC121244995
location: complement(join(849035..849063,849147..849247,849403..849561,849653..849715,849932..849979,850097..850214,850718..850913,851015..851136,852124..852516,852778..853034))
location: region:849035-853034:-1
so has part: feature:852778-853034:-1:exon
so has part: feature:852124-852516:-1:exon
so has part: feature:851015-851136:-1:exon
so has part: feature:850718-850913:-1:exon
so has part: feature:850097-850214:-1:exon
so has part: feature:849932-849979:-1:exon
so has part: feature:849653-849715:-1:exon
so has part: feature:849403-849561:-1:exon
so has part: feature:849147-849247:-1:exon
so has part: feature:849035-849063:-1:exon

position:849035:-1
position: 849035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:852778-853034:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:852124-852516:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:851015-851136:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:850718-850913:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:850097-850214:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:849932-849979:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:849653-849715:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:849403-849561:-1:exon

position:849403:-1
position: 849403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:849561:-1
position: 849561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:849147-849247:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:849035-849063:-1:exon

LOC121244995
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2249226
gene: LOC121244995
product: probable choline kinase 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005936521.1
SIO_010081: LOC121244995
so part of: LOC121244995
location: complement(join(849037..849063,849147..849247,849403..849561,849932..849979,850097..850214,850718..850913,851015..851136,852124..852516,852778..853033))
location: region:849037-853033:-1
so has part: feature:852778-853033:-1:exon
so has part: feature:852124-852516:-1:exon
so has part: feature:851015-851136:-1:exon
so has part: feature:850718-850913:-1:exon
so has part: feature:850097-850214:-1:exon
so has part: feature:849932-849979:-1:exon
so has part: feature:849403-849561:-1:exon
so has part: feature:849147-849247:-1:exon
so has part: feature:849037-849063:-1:exon

position:849037:-1
position: 849037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853033:-1
position: 853033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:852778-853033:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:852124-852516:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:851015-851136:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:850718-850913:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:850097-850214:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:849932-849979:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:849403-849561:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:849147-849247:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:849037-849063:-1:exon

LOC121244995
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244995
product: probable choline kinase 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_041143259.1
SIO_010081: LOC121244995
subclass of: SO_0000673
so part of: LOC121244995
location: complement(join(849674..849789,849932..849979,850097..850214,850718..850913,851015..851136,852124..852516,852778..853033))
location: region:849674-853033:-1
so has part: feature:852778-853033:-1:exon
so has part: feature:852124-852516:-1:exon
so has part: feature:851015-851136:-1:exon
so has part: feature:850718-850913:-1:exon
so has part: feature:850097-850214:-1:exon
so has part: feature:849932-849979:-1:exon
so has part: feature:849674-849789:-1:exon

position:849674:-1
position: 849674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:852778-853033:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:852124-852516:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:851015-851136:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:850718-850913:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:850097-850214:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:849932-849979:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:849674-849789:-1:exon

position:849789:-1
position: 849789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121244995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2249226
gene: LOC121244995
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable choline kinase 2 isoform X3
translation: MGITTRDFVEDRLPEELKKVLRSVAANWGDVMDDLEALEVIKLNGAMTNEVYQINWPAKNSGVGRKVLVRVYGEGVEVFFNRDDEIRTFECISKQGKGPRLLGRFPDGRVEEFIHARTLSAADLRDPEISALIAAKMREFHNLPVPGPKNLLIWDRLRNWLCVAKSLCSSHDTQDFCLDTLGMEISMLEKELSQDYQEVGFCHNDLQYGNIMMDEETRSLTLIDYEYASYNPIAYDIANHFCEMAANYHSQTPHVLDYSQYPDLEERQRFVRIYLSSAGRAPIGV
SIO_010081: LOC121244995
subclass of: SO_0000673
so part of: LOC121244995
location: complement(join(849767..849789,849932..849979,850097..850214,850718..850913,851015..851136,852124..852474))
location: region:849767-852474:-1
so has part: feature:852124-852474:-1:exon
so has part: feature:851015-851136:-1:exon
so has part: feature:850718-850913:-1:exon
so has part: feature:850097-850214:-1:exon
so has part: feature:849932-849979:-1:exon
so has part: feature:849767-849789:-1:exon

XP_040999193.1
type: Protein
SIO_000068: ncbiprotein

position:849767:-1
position: 849767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:852124-852474:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:851015-851136:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:850718-850913:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:850097-850214:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:849932-849979:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:849767-849789:-1:exon

LOC121244387
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244387
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 870359..885788
location: region:870359-885788:1
so has part: feature:870359-885788:1:exon
subclass of: SO_0000010

121244387
type: Gene
SIO_000068: ncbigene

position:870359:1
position: 870359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885788:1
position: 885788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:870359-885788:1:exon

LOC121244387
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244387
product: 40S ribosomal protein S18, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_041142449.1
SIO_010081: LOC121244387
subclass of: SO_0000673
so part of: LOC121244387
location: join(870359..870370,884265..884279,884390..884550,884941..885129,885476..885788)
location: region:870359-885788:1
so has part: feature:870359-870370:1:exon
so has part: feature:884265-884279:1:exon
so has part: feature:884390-884550:1:exon
so has part: feature:884941-885129:1:exon
so has part: feature:885476-885788:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:870359-870370:1:exon

position:870370:1
position: 870370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:884265-884279:1:exon

position:884265:1
position: 884265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:884279:1
position: 884279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:884390-884550:1:exon

position:884390:1
position: 884390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:884550:1
position: 884550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:884941-885129:1:exon

position:884941:1
position: 884941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885129:1
position: 885129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:885476-885788:1:exon

position:885476:1
position: 885476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121244387
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244387
product: 40S ribosomal protein S18, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 94 samples with support for all annotated introns
transcript id: XM_041142447.1
SIO_010081: LOC121244387
subclass of: SO_0000673
so part of: LOC121244387
location: join(870360..870374,884265..884279,884390..884550,884941..885129,885476..885788)
location: region:870360-885788:1
so has part: feature:870360-870374:1:exon
so has part: feature:884265-884279:1:exon
so has part: feature:884390-884550:1:exon
so has part: feature:884941-885129:1:exon
so has part: feature:885476-885788:1:exon

position:870360:1
position: 870360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:870360-870374:1:exon

position:870374:1
position: 870374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:884265-884279:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:884390-884550:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:884941-885129:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:885476-885788:1:exon

LOC121244380
type: Gene
subclass of: SO_0000704
RO_0002162: 2249226
gene: LOC121244380
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 872789..883064
location: region:872789-883064:1
so has part: feature:872789-883064:1:exon
subclass of: SO_0000010

121244380
type: Gene
SIO_000068: ncbigene

position:872789:1
position: 872789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883064:1
position: 883064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:872789-883064:1:exon

LOC121244380
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2249226
gene: LOC121244380
product: protein GIGANTEA-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 3 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 87 samples with support for all annotated introns
transcript id: XM_041142437.1
SIO_010081: LOC121244380
subclass of: SO_0000673
so part of: LOC121244380
location: join(872789..872985,873141..873232,873335..873571,875493..875564,875742..875796,875916..876058,876272..876546,877452..877507,878118..878358,878493..878643,879203..879412,879574..881118,881571..881639,881908..882126,882315..882407,882607..883064)
location: region:872789-883064:1
so has part: feature:872789-872985:1:exon
so has part: feature:873141-873232:1:exon
so has part: feature:873335-873571:1:exon
so has part: feature:875493-875564:1:exon
so has part: feature:875742-875796:1:exon
so has part: feature:875916-876058:1:exon
so has part: feature:876272-876546:1:exon
so has part: feature:877452-877507:1:exon
so has part: feature:878118-878358:1:exon
so has part: feature:878493-878643:1:exon
so has part: feature:879203-879412:1:exon
so has part: feature:879574-881118:1:exon
so has part: feature:881571-881639:1:exon
so has part: feature:881908-882126:1:exon
so has part: feature:882315-882407:1:exon
so has part: feature:882607-883064:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:872789-872985:1:exon

position:872985:1
position: 872985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:873141-873232:1:exon

position:873141:1
position: 873141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873232:1
position: 873232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:873335-873571:1:exon

position:873335:1
position: 873335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873571:1
position: 873571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:875493-875564:1:exon

position:875493:1
position: 875493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875564:1
position: 875564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:875742-875796:1:exon

position:875742:1
position: 875742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875796:1
position: 875796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:875916-876058:1:exon

position:875916:1
position: 875916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876058:1
position: 876058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:876272-876546:1:exon

position:876272:1
position: 876272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876546:1
position: 876546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:877452-877507:1:exon

position:877452:1
position: 877452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877507:1
position: 877507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:878118-878358:1:exon

position:878118:1
position: 878118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878358:1
position: 878358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:878493-878643:1:exon