Aquifex aeolicus VF5 plasmid ece1, complete sequence.
Bacteria; Aquificota; Aquificae; Aquificales; Aquificaceae; Aquifex.
The complete genome of the hyperthermophilic bacterium Aquifex aeolicus
Submitted (09-SEP-1997) Genomics, Diversa Corporation, San Diego, CA 92121, USA
REFSEQ INFORMATION: The reference sequence is identical to\nAE000667.1.\nPutative indicates similarity to known proteins\nHypothetical indicates similarity to a protein of unknown function.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/23/2023 08:22:01\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,823\nCDSs (total) :: 1,771\nGenes (coding) :: 1,745\nCDSs (with protein) :: 1,745\nGenes (RNA) :: 52\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 44\nncRNAs :: 2\nPseudo Genes (total) :: 26\nCDSs (without protein) :: 26\nPseudo Genes (ambiguous residues) :: 0 of 26\nPseudo Genes (frameshifted) :: 10 of 26\nPseudo Genes (incomplete) :: 18 of 26\nPseudo Genes (internal stop) :: 1 of 26\nPseudo Genes (multiple problems) :: 3 of 26\nCRISPR Arrays :: 6\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_008287655.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010890545.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_010890546.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890547.1
S-adenosylmethionine:tRNA ribosyltransferase-isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_010890548.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890549.1
COORDINATES: protein motif:HMM:NF017757.2
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_020258866.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890550.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890551.1
COORDINATES: protein motif:HMM:NF037100.2
nucleotidyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010890553.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890554.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890555.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010890556.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890557.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890558.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890559.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890560.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890561.1
COORDINATES: protein motif:HMM:NF013970.2
COORDINATES: similar to AA sequence:RefSeq:WP_008287623.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010890562.1
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013908339.1
COORDINATES: protein motif:HMM:NF013561.2
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010890563.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890564.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890565.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890567.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890568.1
COORDINATES: similar to AA sequence:RefSeq:WP_018703623.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890571.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890572.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890573.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611113.1
GO:0004803 - transposase activity [Evidence IEA]
IS5-like element ISAae1 family transposase