Azospirillum thermophilum strain CFH 70021 plasmid unnamed3.
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Azospirillaceae; Azospirillum.
Azospirillum thermophilum sp. nov., isolated from a hot spring
Submitted (10-MAY-2018) College of Fisheries, Henan Normal University, Jianshe Road, Xinxiang, Henan 453007, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP029358.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. September-2017; SOAPdenovo v.\n September-2017\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio; Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/04/2023 06:29:32\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,291\nCDSs (total) :: 6,196\nGenes (coding) :: 5,954\nCDSs (with protein) :: 5,954\nGenes (RNA) :: 95\nrRNAs :: 6, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 7, 7 (5S, 16S, 23S)\ntRNAs :: 71\nncRNAs :: 4\nPseudo Genes (total) :: 242\nCDSs (without protein) :: 242\nPseudo Genes (ambiguous residues) :: 0 of 242\nPseudo Genes (frameshifted) :: 175 of 242\nPseudo Genes (incomplete) :: 84 of 242\nPseudo Genes (internal stop) :: 3 of 242\nPseudo Genes (multiple problems) :: 19 of 242\nCRISPR Arrays :: 8\n##Genome-Annotation-Data-END##
type material of Azospirillum thermophilum
COORDINATES: similar to AA sequence:RefSeq:WP_019654676.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_018913352.1
COORDINATES: similar to AA sequence:RefSeq:WP_012746643.1
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF026177.2
COORDINATES: protein motif:HMM:NF024854.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018701124.1
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF016200.2
GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018701122.1
GO:0055085 - transmembrane transport [Evidence IEA]
TRAP transporter substrate-binding protein DctP
COORDINATES: similar to AA sequence:RefSeq:WP_007612720.1
GO:0070403 - NAD+ binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007009261.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
NAD/NADP-dependent octopine/nopaline dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013391327.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014239472.1
COORDINATES: similar to AA sequence:RefSeq:WP_019700979.1
COORDINATES: similar to AA sequence:RefSeq:WP_014239463.1
COORDINATES: similar to AA sequence:RefSeq:WP_011796244.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014239461.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_014188797.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012973506.1
COORDINATES: similar to AA sequence:RefSeq:WP_006103040.1
COORDINATES: similar to AA sequence:RefSeq:WP_007564071.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020011545.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012042852.1
COORDINATES: protein motif:HMM:NF013884.2
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019402191.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014242456.1
COORDINATES: protein motif:HMM:TIGR00180.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189501.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189217.1
COORDINATES: protein motif:HMM:NF024212.2
COORDINATES: similar to AA sequence:RefSeq:WP_014241954.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199473.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189459.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977743.1
GO:0006817 - phosphate ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189461.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977741.1
COORDINATES: similar to AA sequence:RefSeq:WP_015371251.1
pyridoxal phosphate-dependent aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006326456.1
COORDINATES: similar to AA sequence:RefSeq:WP_015371253.1
COORDINATES: protein motif:HMM:NF017532.2
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_006326462.1
COORDINATES: similar to AA sequence:RefSeq:WP_015916859.1
GO:0033980 - phosphonopyruvate decarboxylase activity [Evidence IEA]
GO:0017000 - antibiotic biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015916858.1
GO:0050188 - phosphoenolpyruvate mutase activity [Evidence IEA]
GO:0019634 - organic phosphonate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011734310.1
COORDINATES: protein motif:HMM:NF039901.1
contractile injection system tape measure protein
COORDINATES: protein motif:HMM:NF020498.2
COORDINATES: similar to AA sequence:RefSeq:WP_014022727.1
COORDINATES: similar to AA sequence:RefSeq:WP_007656711.1
COORDINATES: protein motif:HMM:TIGR01646.1
type VI secretion system tip protein VgrG
COORDINATES: protein motif:HMM:NF039279.1
COORDINATES: protein motif:HMM:NF039278.1
COORDINATES: protein motif:HMM:TIGR02241.1
COORDINATES: similar to AA sequence:RefSeq:WP_015817153.1
COORDINATES: protein motif:HMM:NF037565.2
COORDINATES: protein motif:HMM:NF025431.2
COORDINATES: protein motif:HMM:NF022839.2
COORDINATES: similar to AA sequence:RefSeq:WP_014189456.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189454.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242153.1
COORDINATES: similar to AA sequence:RefSeq:WP_012433251.1
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014331094.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
PAS domain-containing hybrid sensor histidine kinase/response regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014189452.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: similar to AA sequence:RefSeq:WP_014249947.1
histidine kinase N-terminal 7TM domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014250169.1
saccharopine dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189364.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012977755.1
GO:0008670 - 2,4-dienoyl-CoA reductase (NADPH) activity [Evidence IEA]; GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0071949 - FAD binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0033543 - fatty acid beta-oxidation, unsaturated, even number, reductase/isomerase pathway [Evidence IEA]
NADPH-dependent 2,4-dienoyl-CoA reductase
COORDINATES: similar to AA sequence:RefSeq:WP_014250200.1
GO:0004540 - ribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189589.1
GO:0015205 - nucleobase transmembrane transporter activity [Evidence IEA]
nucleobase:cation symporter-2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014198589.1
COORDINATES: similar to AA sequence:RefSeq:WP_008943203.1
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: similar to AA sequence:RefSeq:WP_012977907.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189597.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977905.1
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: similar to AA sequence:RefSeq:WP_014189599.1
COORDINATES: similar to AA sequence:RefSeq:WP_018227864.1
phosphate/phosphite/phosphonate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_019198304.1
GO:0018578 - protocatechuate 3,4-dioxygenase activity [Evidence IEA]
GO:0046278 - 3,4-dihydroxybenzoate metabolic process [Evidence IEA]
protocatechuate 3,4-dioxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_007673872.1
protocatechuate 3,4-dioxygenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_012977683.1
GO:0047472 - 3-carboxy-cis,cis-muconate cycloisomerase activity [Evidence IEA]
GO:0019619 - 3,4-dihydroxybenzoate catabolic process [Evidence IEA]
3-carboxy-cis,cis-muconate cycloisomerase
COORDINATES: similar to AA sequence:RefSeq:WP_012977684.1
GO:0047575 - 4-carboxymuconolactone decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012113136.1
GO:0047570 - 3-oxoadipate enol-lactonase activity [Evidence IEA]
GO:0042952 - beta-ketoadipate pathway [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004197326.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977687.1
COORDINATES: similar to AA sequence:RefSeq:WP_016395588.1
GO:0008410 - CoA-transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014198977.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977690.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189287.1
COORDINATES: similar to AA sequence:RefSeq:WP_003499190.1
COORDINATES: similar to AA sequence:RefSeq:WP_012494731.1
COORDINATES: protein motif:HMM:NF040427.1
COORDINATES: similar to AA sequence:RefSeq:WP_004273302.1
GO:0018659 - 4-hydroxybenzoate 3-monooxygenase activity [Evidence IEA]
GO:0018874 - benzoate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189813.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189812.1
GO:0009001 - serine O-acetyltransferase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005666439.1
GO:0016872 - intramolecular lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976864.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012976863.1
COORDINATES: similar to AA sequence:RefSeq:WP_014285460.1
ribose ABC transporter substrate-binding protein RbsB
COORDINATES: similar to AA sequence:RefSeq:WP_012976861.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0000976 - transcription cis-regulatory region binding [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]; GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_010515229.1
GO:0004747 - ribokinase activity [Evidence IEA]
GO:0019303 - D-ribose catabolic process [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012503.2
COORDINATES: similar to AA sequence:RefSeq:WP_006224133.1
COORDINATES: similar to AA sequence:RefSeq:WP_012565541.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189261.1
COORDINATES: similar to AA sequence:RefSeq:WP_014241888.1
nitrate reductase cytochrome c-type subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014189259.1
GO:0009325 - nitrate reductase complex [Evidence IEA]
GO:0008940 - nitrate reductase activity [Evidence IEA]
GO:0042126 - nitrate metabolic process [Evidence IEA]
periplasmic nitrate reductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012565687.1
COORDINATES: similar to AA sequence:RefSeq:WP_012565686.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013165986.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
periplasmic nitrate reductase, NapE protein
COORDINATES: similar to AA sequence:RefSeq:WP_014198989.1
GO:0043169 - cation binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00254.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976744.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240591.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250092.1
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008386144.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977649.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197551.1
COORDINATES: protein motif:HMM:NF013056.2
COORDINATES: similar to AA sequence:RefSeq:WP_014189604.1
manganese efflux pump MntP family protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00080
yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_006202370.1
GO:0008892 - guanine deaminase activity [Evidence IEA]
GO:0006147 - guanine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014198003.1
COORDINATES: similar to AA sequence:RefSeq:WP_014247837.1
COORDINATES: similar to AA sequence:RefSeq:WP_010629875.1
COORDINATES: similar to AA sequence:RefSeq:WP_011583357.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_014187893.1
GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014187892.1
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014187891.1
GO:0004133 - glycogen debranching enzyme activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014240600.1
GO:0003844 - 1,4-alpha-glucan branching enzyme activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014187888.1
GO:0047471 - maltose alpha-D-glucosyltransferase activity [Evidence IEA]
GO:0005991 - trehalose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014745970.1
GO:0015293 - symporter activity [Evidence IEA]
bile acid:sodium symporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011841867.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011388480.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_014199663.1
GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004673546.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
type II toxin-antitoxin system ParD family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_012285610.1
COORDINATES: similar to AA sequence:RefSeq:WP_009340170.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977823.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
cyclopropane-fatty-acyl-phospholipid synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011388484.1
COORDINATES: similar to AA sequence:RefSeq:WP_012567209.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977825.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018954609.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF040005.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249785.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249786.1
COORDINATES: similar to AA sequence:RefSeq:WP_004170656.1
COORDINATES: protein motif:HMM:NF014420.2
energy-coupling factor transporter transmembrane component T
COORDINATES: similar to AA sequence:RefSeq:WP_011974703.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249451.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977462.1
GO:0016746 - acyltransferase activity [Evidence IEA]
GO:0006635 - fatty acid beta-oxidation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008329652.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249458.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249459.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249460.1
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: similar to AA sequence:RefSeq:WP_012320154.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249464.1
GO:0043546 - molybdopterin cofactor binding [Evidence IEA]; GO:0016667 - oxidoreductase activity, acting on a sulfur group of donors [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]
protein-methionine-sulfoxide reductase catalytic subunit MsrP
COORDINATES: similar to AA sequence:RefSeq:WP_012977269.1
protein-methionine-sulfoxide reductase heme-binding subunit MsrQ
COORDINATES: similar to AA sequence:RefSeq:WP_014239124.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249467.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188209.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188208.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188207.1
branched-chain amino acid ABC transporter ATP-binding protein/permease
COORDINATES: protein motif:HMM:NF014684.2
COORDINATES: similar to AA sequence:RefSeq:WP_014240018.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_012701056.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240016.1
GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188197.1
GO:0009032 - thymidine phosphorylase activity [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012975842.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012975843.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014240012.1
GO:0004126 - cytidine deaminase activity [Evidence IEA]
GO:0008655 - pyrimidine-containing compound salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012975845.1
GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012975846.1
COORDINATES: similar to AA sequence:RefSeq:WP_014239334.1
COORDINATES: similar to AA sequence:RefSeq:WP_006200397.1
COORDINATES: similar to AA sequence:RefSeq:WP_010911498.1
COORDINATES: similar to AA sequence:RefSeq:WP_014322989.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977949.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977950.1
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189829.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240930.1
COORDINATES: similar to AA sequence:RefSeq:WP_012974670.1
COORDINATES: similar to AA sequence:RefSeq:WP_014248377.1
GO:0003882 - CDP-diacylglycerol-serine O-phosphatidyltransferase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-diacylglycerol--serine O-phosphatidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014248378.1
COORDINATES: similar to AA sequence:RefSeq:WP_014248379.1
COORDINATES: protein motif:HMM:NF016907.2
COORDINATES: similar to AA sequence:RefSeq:WP_014248381.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240077.1
COORDINATES: similar to AA sequence:RefSeq:WP_014248383.1
COORDINATES: similar to AA sequence:RefSeq:WP_014248384.1
COORDINATES: protein motif:HMM:NF026110.2
COORDINATES: protein motif:HMM:NF013440.2
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014248385.1
COORDINATES: similar to AA sequence:RefSeq:WP_014248386.1
GO:0042314 - bacteriochlorophyll binding [Evidence IEA]
GO:0019684 - photosynthesis, light reaction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012974680.1
GO:0043461 - proton-transporting ATP synthase complex assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014248388.1
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014240064.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014248390.1
COORDINATES: similar to AA sequence:RefSeq:WP_014088004.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240062.1
COORDINATES: similar to AA sequence:RefSeq:WP_012974486.1
GO:0006260 - DNA replication [Evidence IEA]
replication-associated recombination protein A
COORDINATES: similar to AA sequence:RefSeq:WP_012974487.1
COORDINATES: similar to AA sequence:RefSeq:WP_012565958.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002725471.1
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_002725469.1
COORDINATES: similar to AA sequence:RefSeq:WP_012565955.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014240053.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012974492.1
COORDINATES: similar to AA sequence:RefSeq:WP_014248116.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015689125.1
COORDINATES: similar to AA sequence:RefSeq:WP_014248118.1
trypsin-like peptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012974496.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014199609.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272579.1
GO:0009055 - electron transfer activity [Evidence IEA]
electron transfer flavoprotein subunit beta/FixA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013418384.1
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: similar to AA sequence:RefSeq:WP_014189427.1
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012978077.1
multidrug efflux RND transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_002635808.1
COORDINATES: protein motif:HMM:TIGR02937.1
COORDINATES: protein motif:HMM:NF025173.2
COORDINATES: similar to AA sequence:RefSeq:WP_014240531.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975472.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009489568.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977405.1
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007021323.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978433.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188498.1
GO:0005247 - voltage-gated chloride channel activity [Evidence IEA]
GO:0006821 - chloride transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019088717.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_014249716.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250136.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249367.1
COORDINATES: similar to AA sequence:RefSeq:WP_014241827.1
COORDINATES: similar to AA sequence:RefSeq:WP_005665089.1
COORDINATES: similar to AA sequence:RefSeq:WP_019402006.1
GO:0006281 - DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada
COORDINATES: similar to AA sequence:RefSeq:WP_019445879.1
COORDINATES: similar to AA sequence:RefSeq:WP_008875789.1
COORDINATES: similar to AA sequence:RefSeq:WP_006333584.1
COORDINATES: similar to AA sequence:RefSeq:WP_008891113.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0015803 - branched-chain amino acid transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
branched-chain amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006396111.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188878.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188877.1
COORDINATES: similar to AA sequence:RefSeq:WP_018448592.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188875.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976226.1
GO:0047420 - N-acyl-D-amino-acid deacylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976227.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976228.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188871.1
COORDINATES: similar to AA sequence:RefSeq:WP_015237132.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198686.1
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977852.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188954.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198688.1
GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012978142.1
carbohydrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012978141.1
COORDINATES: protein motif:HMM:NF012363.2
COORDINATES: similar to AA sequence:RefSeq:WP_014187944.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975660.1
winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_019644475.1
COORDINATES: similar to AA sequence:RefSeq:WP_005298325.1
TetR/AcrR family transcriptional regulator
COORDINATES: protein motif:HMM:NF024796.2
COORDINATES: similar to AA sequence:RefSeq:WP_014189595.1
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014197875.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197874.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977627.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004359 - glutaminase activity [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250134.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242556.1
GO:0008422 - beta-glucosidase activity [Evidence IEA]
GO:0030245 - cellulose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014242563.1
ABC transporter ATP-binding protein/permease
COORDINATES: similar to AA sequence:RefSeq:WP_006913832.1
COORDINATES: protein motif:HMM:NF016807.2
COORDINATES: similar to AA sequence:RefSeq:WP_012978531.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189437.1
HAMP domain-containing methyl-accepting chemotaxis protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189438.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978041.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978040.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189441.1
GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]
high-affinity branched-chain amino acid ABC transporter permease LivM
COORDINATES: similar to AA sequence:RefSeq:WP_014249989.1
LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
branched-chain amino acid ABC transporter permease LivH
COORDINATES: similar to AA sequence:RefSeq:WP_012978037.1
GO:0000286 - alanine dehydrogenase activity [Evidence IEA]
GO:0006522 - alanine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012978036.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249719.1
GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007675915.1
xanthine dehydrogenase family protein molybdopterin-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012974146.1
COORDINATES: protein motif:HMM:NF012772.2
COORDINATES: similar to AA sequence:RefSeq:WP_014240597.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240596.1
GO:0008441 - 3'(2'),5'-bisphosphate nucleotidase activity [Evidence IEA]
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
3'(2'),5'-bisphosphate nucleotidase CysQ
COORDINATES: similar to AA sequence:RefSeq:WP_014240595.1
COORDINATES: similar to AA sequence:RefSeq:WP_014247540.1
COORDINATES: protein motif:HMM:NF015737.2
autotransporter domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016553876.1
COORDINATES: similar to AA sequence:RefSeq:WP_004117178.1
COORDINATES: similar to AA sequence:RefSeq:WP_015435477.1
COORDINATES: similar to AA sequence:RefSeq:WP_004117173.1
COORDINATES: similar to AA sequence:RefSeq:WP_015340923.1
COORDINATES: similar to AA sequence:RefSeq:WP_016558317.1
COORDINATES: similar to AA sequence:RefSeq:WP_015340921.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]; GO:0003959 - NADPH dehydrogenase activity [Evidence IEA]
bifunctional salicylyl-CoA 5-hydroxylase/oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_006393119.1
COORDINATES: similar to AA sequence:RefSeq:WP_018992067.1
COORDINATES: similar to AA sequence:RefSeq:WP_003070864.1
GO:0006725 - cellular aromatic compound metabolic process [Evidence IEA]
aromatic-ring-hydroxylating dioxygenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_018992065.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008158673.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010659193.1
indolepyruvate oxidoreductase subunit beta family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012093348.1
indolepyruvate ferredoxin oxidoreductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_007703391.1
MarR family winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012974479.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0140658 - ATP-dependent chromatin remodeler activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019421.2
type II toxin-antitoxin system HipA family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_012974193.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189659.1
COORDINATES: protein motif:HMM:NF024140.2
COORDINATES: similar to AA sequence:RefSeq:WP_012973900.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977739.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019654679.1
COORDINATES: similar to AA sequence:RefSeq:WP_007732737.1
GO:0005324 - long-chain fatty acid transporter activity [Evidence IEA]; GO:0004467 - long-chain fatty acid-CoA ligase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007831254.1
GO:0016812 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013391691.1
COORDINATES: similar to AA sequence:RefSeq:WP_017523149.1
COORDINATES: similar to AA sequence:RefSeq:WP_007831224.1
COORDINATES: similar to AA sequence:RefSeq:WP_018913351.1