Azospirillum thermophilum strain CFH 70021 plasmid unnamed2.
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Azospirillaceae; Azospirillum.
Azospirillum thermophilum sp. nov., isolated from a hot spring
Submitted (10-MAY-2018) College of Fisheries, Henan Normal University, Jianshe Road, Xinxiang, Henan 453007, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP029357.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. September-2017; SOAPdenovo v.\n September-2017\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio; Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/04/2023 06:29:32\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,291\nCDSs (total) :: 6,196\nGenes (coding) :: 5,954\nCDSs (with protein) :: 5,954\nGenes (RNA) :: 95\nrRNAs :: 6, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 7, 7 (5S, 16S, 23S)\ntRNAs :: 71\nncRNAs :: 4\nPseudo Genes (total) :: 242\nCDSs (without protein) :: 242\nPseudo Genes (ambiguous residues) :: 0 of 242\nPseudo Genes (frameshifted) :: 175 of 242\nPseudo Genes (incomplete) :: 84 of 242\nPseudo Genes (internal stop) :: 3 of 242\nPseudo Genes (multiple problems) :: 19 of 242\nCRISPR Arrays :: 8\n##Genome-Annotation-Data-END##
type material of Azospirillum thermophilum
COORDINATES: protein motif:HMM:NF015803.2
Derived by automated computational analysis using gene prediction method: Protein Homology.
ShlB/FhaC/HecB family hemolysin secretion/activation protein
COORDINATES: protein motif:HMM:NF017658.2
filamentous hemagglutinin N-terminal domain-containing protein
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF024180.2
COORDINATES: protein motif:HMM:NF018691.2
COORDINATES: protein motif:HMM:NF022744.2
COORDINATES: similar to AA sequence:RefSeq:WP_012977555.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017348485.1
COORDINATES: similar to AA sequence:RefSeq:WP_009759488.1
GO:0004014 - adenosylmethionine decarboxylase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019905739.1
COORDINATES: protein motif:HMM:NF024824.2
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249433.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977379.1
COORDINATES: similar to AA sequence:RefSeq:WP_014200057.1
COORDINATES: similar to AA sequence:RefSeq:WP_020177910.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249429.1
COORDINATES: protein motif:HMM:NF021637.2
COORDINATES: similar to AA sequence:RefSeq:WP_014250149.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014241898.1
GO:0009486 - cytochrome bo3 ubiquinol oxidase activity [Evidence IEA]
GO:0015990 - electron transport coupled proton transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014241897.1
cytochrome o ubiquinol oxidase subunit I
COORDINATES: similar to AA sequence:RefSeq:WP_019860070.1
cytochrome o ubiquinol oxidase subunit III
COORDINATES: similar to AA sequence:RefSeq:WP_015458550.1
cytochrome o ubiquinol oxidase subunit IV
COORDINATES: similar to AA sequence:RefSeq:WP_012978270.1
COORDINATES: similar to AA sequence:RefSeq:WP_006206838.1
COORDINATES: similar to AA sequence:RefSeq:WP_018388283.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188219.1
COORDINATES: similar to AA sequence:RefSeq:WP_007608036.1
COORDINATES: protein motif:HMM:NF012245.2
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012566118.1
COORDINATES: similar to AA sequence:RefSeq:WP_014241760.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014241759.1
two-component system response regulator BtsR
COORDINATES: similar to AA sequence:RefSeq:WP_014188365.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188366.1
quinoprotein dehydrogenase-associated SoxYZ-like carrier
COORDINATES: similar to AA sequence:RefSeq:WP_018642685.1
quinoprotein relay system zinc metallohydrolase 2
COORDINATES: similar to AA sequence:RefSeq:WP_007039306.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007065652.1
COORDINATES: similar to AA sequence:RefSeq:WP_013165874.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012975949.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014188377.1
PQQ-dependent catabolism-associated beta-propeller protein
COORDINATES: similar to AA sequence:RefSeq:WP_014242233.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014242234.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242242.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242243.1
COORDINATES: protein motif:HMM:TIGR03865.1
rhodanese-like domain-containing protein
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014188386.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014242246.1
methanol/ethanol family PQQ-dependent dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014242248.1
COORDINATES: similar to AA sequence:RefSeq:WP_014241758.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977550.1
GO:0008861 - formate C-acetyltransferase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005369012.1
HPF/RaiA family ribosome-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189211.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003535752.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003535753.1
amino acid ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF012772.2
Nif11-like leader peptide family natural product precursor
COORDINATES: protein motif:HMM:NF014135.2
COORDINATES: similar to AA sequence:RefSeq:WP_019400231.1
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009764153.1
COORDINATES: similar to AA sequence:RefSeq:WP_010972787.1
TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189082.1
GO:0015649 - 2-keto-3-deoxygluconate:proton symporter activity [Evidence IEA]
GO:0046411 - 2-keto-3-deoxygluconate transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007439110.1
GO:0003824 - catalytic activity [Evidence IEA]
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977780.1
GO:0008697 - 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity [Evidence IEA]
GO:0045490 - pectin catabolic process [Evidence IEA]
5-dehydro-4-deoxy-D-glucuronate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_012555048.1
GO:0008678 - 2-deoxy-D-gluconate 3-dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0000272 - polysaccharide catabolic process [Evidence IEA]
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD
COORDINATES: similar to AA sequence:RefSeq:WP_017258121.1
COORDINATES: similar to AA sequence:RefSeq:WP_009059858.1
sodium ion-translocating decarboxylase subunit beta
COORDINATES: protein motif:HMM:NF012584.2
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit
COORDINATES: protein motif:HMM:NF016187.2
GO:0008948 - oxaloacetate decarboxylase activity [Evidence IEA]; GO:0015081 - sodium ion transmembrane transporter activity [Evidence IEA]
GO:0036376 - sodium ion export across plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008674374.1
carboxyl transferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249554.1
tripartite tricarboxylate transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_014241797.1
GO:0005215 - transporter activity [Evidence IEA]
tripartite tricarboxylate transporter TctB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016233692.1
GO:0042597 - periplasmic space [Evidence IEA]
tripartite tricarboxylate transporter substrate binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_009505041.1
GO:0008674 - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity [Evidence IEA]
GO:0034194 - D-galactonate catabolic process [Evidence IEA]
2-dehydro-3-deoxy-6-phosphogalactonate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_012977545.1
COORDINATES: similar to AA sequence:RefSeq:WP_014241801.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014241794.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976977.1
GO:0008901 - ferredoxin hydrogenase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
hydrogenase maturation nickel metallochaperone HypA
COORDINATES: similar to AA sequence:RefSeq:WP_012976978.1
4Fe-4S dicluster domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189075.1
aldehyde ferredoxin oxidoreductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012976980.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189792.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189072.1
proton-conducting transporter membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012976983.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoB
COORDINATES: similar to AA sequence:RefSeq:WP_014189789.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189788.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189068.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189786.1
GO:0016151 - nickel cation binding [Evidence IEA]
nickel-dependent hydrogenase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014190043.1
PAS domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_014249376.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242054.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249374.1
C4-dicarboxylate TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012978360.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976549.1
GO:0004364 - glutathione transferase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
glutathione S-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189230.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189229.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189228.1
COORDINATES: similar to AA sequence:RefSeq:WP_008972510.1
GO:0008927 - mannonate dehydratase activity [Evidence IEA]
GO:0006064 - glucuronate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009492558.1
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008955547.1
hydroxypyruvate isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010123452.1
COORDINATES: similar to AA sequence:RefSeq:WP_008262534.1
GO:0004672 - protein kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
bifunctional protein-serine/threonine kinase/phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_010121689.1
formate/nitrite transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010339111.1
GO:0016153 - urocanate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006205890.1
GO:0004397 - histidine ammonia-lyase activity [Evidence IEA]
GO:0006548 - histidine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006205889.1
GO:0050480 - imidazolonepropionase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010967212.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249445.1
COORDINATES: similar to AA sequence:RefSeq:WP_014626148.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249443.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976421.1
COORDINATES: protein motif:HMM:NF019322.2
COORDINATES: similar to AA sequence:RefSeq:WP_008918524.1
2-oxoglutarate and iron-dependent oxygenase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010045137.1
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014241972.1
GO:0050129 - N-formylglutamate deformylase activity [Evidence IEA]
GO:0019557 - histidine catabolic process to glutamate and formate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002632569.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009541375.1
COORDINATES: similar to AA sequence:RefSeq:WP_015498552.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012975668.1
TMAO reductase system periplasmic protein TorT
COORDINATES: similar to AA sequence:RefSeq:WP_012654156.1
biotin-dependent carboxyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189240.1
carboxyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012975671.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014189242.1
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015497158.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975674.1
COORDINATES: similar to AA sequence:RefSeq:WP_005332662.1
GO:0030151 - molybdenum ion binding [Evidence IEA]; GO:0043546 - molybdopterin cofactor binding [Evidence IEA]; GO:0050626 - trimethylamine-N-oxide reductase (cytochrome c) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015237.2
COORDINATES: similar to AA sequence:RefSeq:WP_012976793.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976794.1
COORDINATES: similar to AA sequence:RefSeq:WP_007958579.1
GO:0015137 - citrate transmembrane transporter activity [Evidence IEA]
GO:0015746 - citrate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976796.1
acyclic terpene utilization AtuA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011389227.1
COORDINATES: similar to AA sequence:RefSeq:WP_011389226.1
GO:0008410 - CoA-transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011471308.1
COORDINATES: similar to AA sequence:RefSeq:WP_009771612.1
ribbon-helix-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977407.1
sigma-54-dependent Fis family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011812091.1
COORDINATES: similar to AA sequence:RefSeq:WP_008919786.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188409.1
aromatic/alkene monooxygenase hydroxylase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_014188410.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977412.1
aromatic/alkene/methane monooxygenase hydroxylase/oxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_014188412.1
COORDINATES: similar to AA sequence:RefSeq:WP_013167540.1
COORDINATES: similar to AA sequence:RefSeq:WP_009029006.1
twin-arginine translocation signal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015317695.1
COORDINATES: protein motif:HMM:NF016876.2
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_012973613.1
GO:0051983 - regulation of chromosome segregation [Evidence IEA]
type II toxin-antitoxin system ParD family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_020605109.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015499 - formate transmembrane transporter activity [Evidence IEA]
GO:0015724 - formate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012573.2
COORDINATES: similar to AA sequence:RefSeq:WP_019400164.1
COORDINATES: similar to AA sequence:RefSeq:WP_014239609.1
GO:0003951 - NAD+ kinase activity [Evidence IEA]
GO:0006741 - NADP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014247133.1
thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012973531.1
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_014239612.1
acetoin dehydrogenase dihydrolipoyllysine-residue acetyltransferase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018388021.1
COORDINATES: similar to AA sequence:RefSeq:WP_008567943.1
COORDINATES: similar to AA sequence:RefSeq:WP_009541602.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006051054.1
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_019586209.1
COORDINATES: similar to AA sequence:RefSeq:WP_014157890.1
COORDINATES: similar to AA sequence:RefSeq:WP_019012391.1
COORDINATES: similar to AA sequence:RefSeq:WP_013555587.1
COORDINATES: similar to AA sequence:RefSeq:WP_018425019.1
phytanoyl-CoA dioxygenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012973392.1
COORDINATES: similar to AA sequence:RefSeq:WP_014247013.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188806.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003941 - L-serine ammonia-lyase activity [Evidence IEA]
GO:0009063 - amino acid catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976916.1
GO:0015171 - amino acid transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188808.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188809.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250227.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014242296.1
COORDINATES: similar to AA sequence:RefSeq:WP_010628351.1
COORDINATES: protein motif:HMM:NF012457.2
GO:0008422 - beta-glucosidase activity [Evidence IEA]
GO:0030245 - cellulose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007710466.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250636.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199264.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977121.1
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014199266.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:0042908 - xenobiotic transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013637207.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_014138909.1
GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008888713.1
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007793039.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006218087.1
GO:0004497 - monooxygenase activity [Evidence IEA]
GO:0005509 - calcium ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012710160.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_010968518.1
COORDINATES: protein motif:HMM:NF012301.2
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:NP_251412.1
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016345295.1
COORDINATES: similar to AA sequence:RefSeq:WP_009899071.1
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: similar to AA sequence:RefSeq:WP_017462509.1
COORDINATES: similar to AA sequence:RefSeq:WP_011400323.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003264000.1
COORDINATES: similar to AA sequence:RefSeq:WP_014745465.1
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: protein motif:HMM:NF014763.2
COORDINATES: similar to AA sequence:RefSeq:WP_014241961.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188221.1
COORDINATES: similar to AA sequence:RefSeq:WP_013520698.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006390625.1
GO:0070403 - NAD+ binding [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014188223.1
3-keto-5-aminohexanoate cleavage protein
COORDINATES: similar to AA sequence:RefSeq:WP_014188224.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977016.1
GO:0015572 - N-acetylglucosamine transmembrane transporter activity [Evidence IEA]
N-acetylglucosamine-specific PTS transporter subunit IIBC
COORDINATES: similar to AA sequence:RefSeq:WP_014189106.1
GO:0097367 - carbohydrate derivative binding [Evidence IEA]; GO:0016835 - carbon-oxygen lyase activity [Evidence IEA]
GO:0046348 - amino sugar catabolic process [Evidence IEA]; GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0097173 - N-acetylmuramic acid catabolic process [Evidence IEA]
N-acetylmuramic acid 6-phosphate etherase
COORDINATES: similar to AA sequence:RefSeq:WP_012977014.1
COORDINATES: protein motif:HMM:TIGR01509.1
COORDINATES: protein motif:HMM:NF012745.2
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014051.2
COORDINATES: similar to AA sequence:RefSeq:WP_008130907.1
COORDINATES: similar to AA sequence:RefSeq:WP_019646401.1
GO:0008448 - N-acetylglucosamine-6-phosphate deacetylase activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]
N-acetylglucosamine-6-phosphate deacetylase
COORDINATES: similar to AA sequence:RefSeq:WP_012977011.1
GO:0097367 - carbohydrate derivative binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189732.1
COORDINATES: similar to AA sequence:RefSeq:WP_008890132.1
GO:0017113 - dihydropyrimidine dehydrogenase (NADP+) activity [Evidence IEA]
GO:0006210 - thymine catabolic process [Evidence IEA]; GO:0006212 - uracil catabolic process [Evidence IEA]
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
COORDINATES: similar to AA sequence:RefSeq:WP_012977763.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189735.1
COORDINATES: similar to AA sequence:RefSeq:WP_014747974.1
GO:0004157 - dihydropyrimidinase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018097084.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978195.1
COORDINATES: similar to AA sequence:RefSeq:WP_004237342.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019200 - carbohydrate kinase activity [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010974218.1
GO:0004747 - ribokinase activity [Evidence IEA]
GO:0019303 - D-ribose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007090237.1
COORDINATES: similar to AA sequence:RefSeq:WP_010660797.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189167.1
COORDINATES: similar to AA sequence:RefSeq:WP_008122577.1
COORDINATES: similar to AA sequence:RefSeq:WP_009565119.1
autoinducer 2 ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977085.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977084.1
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012978118.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
ABC transporter transmembrane domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012978119.1
COORDINATES: similar to AA sequence:RefSeq:WP_008227743.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189346.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978122.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978123.1
GO:0016758 - hexosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014879110.1
COORDINATES: similar to AA sequence:RefSeq:WP_015933525.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978126.1
COORDINATES: similar to AA sequence:RefSeq:WP_005851907.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189354.1
COORDINATES: similar to AA sequence:RefSeq:WP_006022803.1
Lrp/AsnC ligand binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014242018.1
GO:0003842 - 1-pyrroline-5-carboxylate dehydrogenase activity [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0004657 - proline dehydrogenase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_012973506.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003167573.1
GO:0016812 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004117135.1
COORDINATES: protein motif:HMM:NF024946.2
COORDINATES: similar to AA sequence:RefSeq:WP_013803944.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007836034.1
styrene monooxygenase/indole monooxygenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015435484.1
COORDINATES: protein motif:HMM:NF025878.2
COORDINATES: similar to AA sequence:RefSeq:WP_014247127.1
COORDINATES: similar to AA sequence:RefSeq:WP_019887196.1
COORDINATES: similar to AA sequence:RefSeq:WP_014217920.1
COORDINATES: protein motif:HMM:TIGR01783.1
GO:0019867 - outer membrane [Evidence IEA]
GO:0015343 - siderophore-iron transmembrane transporter activity [Evidence IEA]
GO:0015891 - siderophore transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189586.1
COORDINATES: similar to AA sequence:RefSeq:WP_011385066.1
COORDINATES: similar to AA sequence:RefSeq:WP_008552855.1
nitrate reductase cytochrome c-type subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011767662.1
quinol dehydrogenase ferredoxin subunit NapH
COORDINATES: similar to AA sequence:RefSeq:WP_011767663.1
COORDINATES: similar to AA sequence:RefSeq:WP_017766050.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]; GO:0043546 - molybdopterin cofactor binding [Evidence IEA]; GO:0008940 - nitrate reductase activity [Evidence IEA]
nitrate reductase catalytic subunit NapA
COORDINATES: similar to AA sequence:RefSeq:WP_008552901.1
COORDINATES: protein motif:HMM:NF024247.2
COORDINATES: protein motif:HMM:NF015658.2
COORDINATES: similar to AA sequence:RefSeq:WP_014199529.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977330.1
COORDINATES: similar to AA sequence:RefSeq:WP_018327474.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO:0009060 - aerobic respiration [Evidence IEA]
cbb3-type cytochrome c oxidase subunit I
COORDINATES: similar to AA sequence:RefSeq:WP_002966338.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014246725.1
GO:0004852 - uroporphyrinogen-III synthase activity [Evidence IEA]
GO:0006782 - protoporphyrinogen IX biosynthetic process [Evidence IEA]; GO:0006780 - uroporphyrinogen III biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014250148.1
COORDINATES: similar to AA sequence:RefSeq:WP_014744163.1
COORDINATES: similar to AA sequence:RefSeq:WP_011389417.1
GO:0102662 - malonate-semialdehyde dehydrogenase (acetylating, NAD+) activity [Evidence IEA]
CoA-acylating methylmalonate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_012976143.1
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011389293.1
COORDINATES: similar to AA sequence:RefSeq:WP_018181993.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977785.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189714.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189715.1
COORDINATES: protein motif:HMM:NF027905.2
HAMP domain-containing methyl-accepting chemotaxis protein
COORDINATES: similar to AA sequence:RefSeq:WP_014238579.1
GO:0004352 - glutamate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0019551 - glutamate catabolic process to 2-oxoglutarate [Evidence IEA]
COORDINATES: protein motif:HMM:NF015431.2
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189059.1
COORDINATES: similar to AA sequence:RefSeq:WP_007424760.1
GO:0004053 - arginase activity [Evidence IEA]
GO:0019547 - arginine catabolic process to ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003508428.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014249268.1
COORDINATES: similar to AA sequence:RefSeq:WP_014238680.1
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015276 - ligand-gated monoatomic ion channel activity [Evidence IEA]
lysine/arginine/ornithine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014238679.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015837 - amine transport [Evidence IEA]
The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc.; The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014249265.1
bifunctional diguanylate cyclase/phosphodiesterase
COORDINATES: similar to AA sequence:RefSeq:WP_018429486.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242491.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242490.1
COORDINATES: similar to AA sequence:RefSeq:WP_011767474.1
COORDINATES: similar to AA sequence:RefSeq:WP_012455599.1
COORDINATES: protein motif:HMM:NF016895.2
GO:0042834 - peptidoglycan binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007536712.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
protein-L-isoaspartate O-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019017350.1
GO:0006629 - lipid metabolic process [Evidence IEA]
patatin-like phospholipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012700633.1
COORDINATES: protein motif:HMM:NF021505.2
COORDINATES: similar to AA sequence:RefSeq:WP_011764417.1
COORDINATES: similar to AA sequence:RefSeq:WP_011385007.1
COORDINATES: protein motif:HMM:NF019874.2
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975167.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008621807.1
COORDINATES: similar to AA sequence:RefSeq:WP_003815620.1
GO:0009055 - electron transfer activity [Evidence IEA]
electron transfer flavoprotein subunit beta/FixA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002727883.1
COORDINATES: similar to AA sequence:RefSeq:WP_014246583.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199987.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199988.1
GO:0008929 - methylglyoxal synthase activity [Evidence IEA]
GO:0019242 - methylglyoxal biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189726.1
GO:0008880 - glucuronate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977771.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199626.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
formate-dependent phosphoribosylglycinamide formyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_003263296.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976253.1
2-hydroxycarboxylate transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012976254.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976255.1
GO:0046917 - triphosphoribosyl-dephospho-CoA synthase activity [Evidence IEA]
GO:0019361 - 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process [Evidence IEA]
triphosphoribosyl-dephospho-CoA synthase CitG
COORDINATES: similar to AA sequence:RefSeq:WP_012976256.1
GO:0050519 - holo-citrate lyase synthase activity [Evidence IEA]
GO:0051191 - prosthetic group biosynthetic process [Evidence IEA]
citrate lyase holo-[acyl-carrier protein] synthase
COORDINATES: similar to AA sequence:RefSeq:WP_012976257.1
GO:0009346 - ATP-independent citrate lyase complex [Evidence IEA]
GO:0008815 - citrate (pro-3S)-lyase activity [Evidence IEA]; GO:0008814 - citrate CoA-transferase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976258.1
GO:0008815 - citrate (pro-3S)-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976259.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976260.1
GO:0008771 - [citrate (pro-3S)-lyase] ligase activity [Evidence IEA]
GO:0006101 - citrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018609788.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976261.1
GO:0004471 - malate dehydrogenase (decarboxylating) (NAD+) activity [Evidence IEA]; GO:0004470 - malic enzyme activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976262.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976263.1
COORDINATES: similar to AA sequence:RefSeq:WP_013513854.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976264.1
COORDINATES: similar to AA sequence:RefSeq:WP_019922360.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189019.1
iron chelate uptake ABC transporter family permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012093163.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189021.1
siderophore ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_010187040.1
COORDINATES: similar to AA sequence:RefSeq:WP_011951727.1
COORDINATES: similar to AA sequence:RefSeq:WP_013204279.1
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_018443476.1
COORDINATES: similar to AA sequence:RefSeq:WP_007938452.1
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: similar to AA sequence:RefSeq:WP_014197358.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977018.1
COORDINATES: similar to AA sequence:RefSeq:WP_013164946.1
PotD/PotF family extracellular solute-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007797933.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189100.1
COORDINATES: similar to AA sequence:RefSeq:WP_013165121.1
GO:0036361 - racemase activity, acting on amino acids and derivatives [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
aspartate/glutamate racemase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015243078.1
GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO:0000373 - Group II intron splicing [Evidence IEA]
group II intron reverse transcriptase/maturase
COORDINATES: similar to AA sequence:RefSeq:WP_014249808.1
GO:0022877 - protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011389724.1
GO:0008662 - 1-phosphofructokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014200189.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019645397.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0000976 - transcription cis-regulatory region binding [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]; GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: similar to AA sequence:RefSeq:WP_020591148.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189111.1
GO:0005355 - glucose transmembrane transporter activity [Evidence IEA]; GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
GO:1904659 - glucose transmembrane transport [Evidence IEA]; GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189112.1
COORDINATES: similar to AA sequence:RefSeq:WP_011389928.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0015413 - ABC-type nickel transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0015675 - nickel cation transport [Evidence IEA]
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012973504.1
COORDINATES: similar to AA sequence:RefSeq:WP_019367280.1
GO:0015099 - nickel cation transmembrane transporter activity [Evidence IEA]
nickel ABC transporter permease subunit NikC
COORDINATES: similar to AA sequence:RefSeq:WP_012973502.1
nickel ABC transporter permease subunit NikB
COORDINATES: similar to AA sequence:RefSeq:WP_012973501.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015413 - ABC-type nickel transporter activity [Evidence IEA]; GO:0016151 - nickel cation binding [Evidence IEA]
nickel ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005296084.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0016151 - nickel cation binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0010045 - response to nickel cation [Evidence IEA]
nickel-responsive transcriptional regulator NikR
COORDINATES: protein motif:HMM:NF037279.2
WcbI family polysaccharide biosynthesis putative acetyltransferase
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: similar to AA sequence:RefSeq:WP_011390099.1
COORDINATES: similar to AA sequence:RefSeq:WP_011390100.1
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: protein motif:HMM:NF025072.2
COORDINATES: similar to AA sequence:RefSeq:WP_011390102.1
COORDINATES: similar to AA sequence:RefSeq:WP_002728009.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011390104.1
TylF/MycF/NovP-related O-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011472338.1
COORDINATES: protein motif:HMM:NF014651.2
COORDINATES: similar to AA sequence:RefSeq:WP_011472336.1
COORDINATES: similar to AA sequence:RefSeq:WP_011472335.1
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: similar to AA sequence:RefSeq:WP_012497040.1
aromatic ring-hydroxylating dioxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012976874.1
COORDINATES: similar to AA sequence:RefSeq:WP_015933407.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020747963.1
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_011300131.1
COORDINATES: similar to AA sequence:RefSeq:WP_008332180.1
COORDINATES: similar to AA sequence:RefSeq:WP_011519208.1
COORDINATES: similar to AA sequence:RefSeq:WP_011484288.1
COORDINATES: similar to AA sequence:RefSeq:WP_019997699.1
3-(3-hydroxy-phenyl)propionate transporter MhpT
COORDINATES: protein motif:HMM:NF024854.2
COORDINATES: similar to AA sequence:RefSeq:WP_010397469.1
COORDINATES: similar to AA sequence:RefSeq:WP_014415874.1
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: protein motif:HMM:NF024591.2
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: similar to AA sequence:RefSeq:WP_019566992.1
COORDINATES: similar to AA sequence:RefSeq:WP_019963879.1
COORDINATES: similar to AA sequence:RefSeq:WP_015342778.1
COORDINATES: similar to AA sequence:RefSeq:WP_020811984.1
COORDINATES: similar to AA sequence:RefSeq:WP_015342776.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978139.1
COORDINATES: similar to AA sequence:RefSeq:WP_017873233.1
GO:0030246 - carbohydrate binding [Evidence IEA]; GO:0016857 - racemase and epimerase activity, acting on carbohydrates and derivatives [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015831332.1
GO:0009267 - cellular response to starvation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005369875.1
COORDINATES: similar to AA sequence:RefSeq:WP_009903961.1
GO:0004456 - phosphogluconate dehydratase activity [Evidence IEA]
GO:0009255 - Entner-Doudoroff pathway through 6-phosphogluconate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014461175.1
COORDINATES: similar to AA sequence:RefSeq:WP_006160195.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046316 - gluconokinase activity [Evidence IEA]
GO:0046177 - D-gluconate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019644563.1
GO:0004089 - carbonate dehydratase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010106407.1
GO:0097367 - carbohydrate derivative binding [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976212.1
GO:0004022 - alcohol dehydrogenase (NAD+) activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006066 - alcohol metabolic process [Evidence IEA]; GO:0015976 - carbon utilization [Evidence IEA]
bifunctional acetaldehyde-CoA/alcohol dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_012973595.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014427955.1
GO:0043365 - [formate-C-acetyltransferase]-activating enzyme activity [Evidence IEA]
pyruvate formate-lyase-activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_014199701.1
bifunctional enoyl-CoA hydratase/phosphate acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014427957.1
GO:0008776 - acetate kinase activity [Evidence IEA]
GO:0006083 - acetate metabolic process [Evidence IEA]; GO:0006113 - fermentation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189008.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189010.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199637.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977782.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199635.1
GO:0008675 - 2-dehydro-3-deoxy-phosphogluconate aldolase activity [Evidence IEA]; GO:0008700 - 4-hydroxy-2-oxoglutarate aldolase activity [Evidence IEA]
GO:0009255 - Entner-Doudoroff pathway through 6-phosphogluconate [Evidence IEA]; GO:0009084 - glutamine family amino acid biosynthetic process [Evidence IEA]
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
COORDINATES: protein motif:HMM:NF025774.2
COORDINATES: protein motif:HMM:NF022072.2
COORDINATES: similar to AA sequence:RefSeq:WP_014189227.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005436826.1
NrtA/SsuA/CpmA family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016492897.1
COORDINATES: similar to AA sequence:RefSeq:WP_019402056.1
COORDINATES: similar to AA sequence:RefSeq:WP_014761355.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977916.1
NahK/ErcS family hybrid sensor histidine kinase/response regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014189543.1
GO:0035991 - nitric oxide sensor activity [Evidence IEA]
GO:0046209 - nitric oxide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189542.1
COORDINATES: similar to AA sequence:RefSeq:WP_017183708.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976407.1
GO:0018149 - peptide cross-linking [Evidence IEA]; GO:0018189 - pyrroloquinoline quinone biosynthetic process [Evidence IEA]
pyrroloquinoline quinone biosynthesis protein PqqE
COORDINATES: similar to AA sequence:RefSeq:WP_012976406.1
GO:0048038 - quinone binding [Evidence IEA]
GO:0018189 - pyrroloquinoline quinone biosynthetic process [Evidence IEA]
pyrroloquinoline quinone biosynthesis peptide chaperone PqqD
COORDINATES: similar to AA sequence:RefSeq:WP_014249837.1
COORDINATES: similar to AA sequence:RefSeq:WP_007422718.1
pyrroloquinoline quinone biosynthesis protein PqqB
COORDINATES: protein motif:HMM:NF019654.2
pyrroloquinoline quinone precursor peptide PqqA
COORDINATES: similar to AA sequence:RefSeq:WP_015684643.1
PQQ-dependent catabolism-associated CXXCW motif protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249841.1
COORDINATES: similar to AA sequence:RefSeq:WP_017183713.1
PQQ-dependent methanol/ethanol family dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_009622921.1
quinoprotein relay system zinc metallohydrolase 1
COORDINATES: similar to AA sequence:RefSeq:WP_014241331.1
COORDINATES: similar to AA sequence:RefSeq:WP_009823457.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188965.1
COORDINATES: similar to AA sequence:RefSeq:WP_013716052.1
YVTN family beta-propeller repeat protein
COORDINATES: similar to AA sequence:RefSeq:WP_018098057.1
COORDINATES: similar to AA sequence:RefSeq:WP_009541509.1
COORDINATES: protein motif:HMM:NF020084.2
COORDINATES: similar to AA sequence:RefSeq:WP_014197639.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249351.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976475.1
COORDINATES: similar to AA sequence:RefSeq:WP_012384146.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187913.1
COORDINATES: similar to AA sequence:RefSeq:WP_018420614.1
COORDINATES: similar to AA sequence:RefSeq:WP_008030835.1
HyaD/HybD family hydrogenase maturation endopeptidase
COORDINATES: similar to AA sequence:RefSeq:WP_014249357.1
HypC/HybG/HupF family hydrogenase formation chaperone
COORDINATES: similar to AA sequence:RefSeq:WP_012977317.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977318.1
hydrogenase expression/formation protein
COORDINATES: similar to AA sequence:RefSeq:WP_007796527.1
[NiFe]-hydrogenase assembly chaperone HybE
COORDINATES: similar to AA sequence:RefSeq:WP_012977320.1
COORDINATES: similar to AA sequence:RefSeq:WP_014236266.1
GO:0016530 - metallochaperone activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
hydrogenase nickel incorporation protein HypB
COORDINATES: similar to AA sequence:RefSeq:WP_014249362.1
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_015667472.1
GO:0016530 - metallochaperone activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0065003 - protein-containing complex assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013913769.1
GO:0016530 - metallochaperone activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020176860.1
hydrogenase expression/formation protein HypE
COORDINATES: similar to AA sequence:RefSeq:WP_012977322.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249364.1
COORDINATES: similar to AA sequence:RefSeq:WP_013913761.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977325.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
GO:0022904 - respiratory electron transport chain [Evidence IEA]
Ni/Fe-hydrogenase, b-type cytochrome subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012978447.1
COORDINATES: similar to AA sequence:RefSeq:WP_014241370.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198367.1
GO:0003998 - acylphosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019460139.1
hydrogen peroxide-inducible genes activator
COORDINATES: similar to AA sequence:RefSeq:WP_016805482.1
GO:0102039 - NADH-dependent peroxiredoxin activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008436566.1
GO:0016668 - oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor [Evidence IEA]
GO:0009398 - FMN biosynthetic process [Evidence IEA]; GO:0006805 - xenobiotic metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024884.2
COORDINATES: protein motif:HMM:NF027890.2
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_017244066.1
COORDINATES: protein motif:HMM:NF037016.2
COORDINATES: similar to AA sequence:RefSeq:WP_011766282.1
COORDINATES: protein motif:HMM:NF014385.2
COORDINATES: similar to AA sequence:RefSeq:WP_008388716.1
COORDINATES: protein motif:HMM:NF012669.2
COORDINATES: similar to AA sequence:RefSeq:WP_007580962.1
four-carbon acid sugar kinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008388722.1
GO:0050570 - 4-hydroxythreonine-4-phosphate dehydrogenase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
COORDINATES: similar to AA sequence:RefSeq:WP_019658195.1
COORDINATES: similar to AA sequence:RefSeq:WP_008159336.1
COORDINATES: similar to AA sequence:RefSeq:WP_015669816.1
COORDINATES: similar to AA sequence:RefSeq:WP_012747079.1
COORDINATES: similar to AA sequence:RefSeq:WP_012314528.1
GO:0050334 - thiaminase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976209.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_019644451.1
ArsI/CadI family heavy metal resistance metalloenzyme
COORDINATES: similar to AA sequence:RefSeq:WP_012521995.1
GO:0030612 - arsenate reductase (thioredoxin) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015459658.1
GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014187839.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019645409.1
COORDINATES: similar to AA sequence:RefSeq:WP_008942984.1
COORDINATES: similar to AA sequence:RefSeq:WP_012567774.1
GO:0016805 - dipeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019862590.1
GO:0016861 - intramolecular oxidoreductase activity, interconverting aldoses and ketoses [Evidence IEA]
GO:0019310 - inositol catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976624.1
MurR/RpiR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012976626.1
GO:0050112 - inositol 2-dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976627.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976628.1
COORDINATES: similar to AA sequence:RefSeq:WP_013481023.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976630.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015821894.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976632.1
GO:0050114 - myo-inosose-2 dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016855611.1
GO:0016823 - hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)
COORDINATES: similar to AA sequence:RefSeq:WP_012976634.1
GO:0047590 - 5-dehydro-2-deoxygluconokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013565039.1
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014200110.1
NAD(P)H-dependent oxidoreductase subunit E
COORDINATES: similar to AA sequence:RefSeq:WP_010546244.1
GO:0047834 - D-threo-aldose 1-dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011156678.1
COORDINATES: protein motif:HMM:NF014045.2
COORDINATES: similar to AA sequence:RefSeq:WP_012973738.1
COORDINATES: similar to AA sequence:RefSeq:WP_012564426.1
COORDINATES: similar to AA sequence:RefSeq:WP_018183852.1
choline ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014188525.1
proline/glycine betaine ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_014188524.1
GO:0031460 - glycine betaine transport [Evidence IEA]
glycine betaine/L-proline ABC transporter ATP-binding protein ProV
COORDINATES: similar to AA sequence:RefSeq:WP_009764626.1
COORDINATES: similar to AA sequence:RefSeq:WP_002925514.1
GO:0005283 - amino acid:sodium symporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA]
GO:0006865 - amino acid transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
alanine/glycine:cation symporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009024659.1
COORDINATES: similar to AA sequence:RefSeq:WP_011518669.1
COORDINATES: similar to AA sequence:RefSeq:WP_016448234.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249569.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0000976 - transcription cis-regulatory region binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014199953.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977559.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249281.1
COORDINATES: protein motif:HMM:NF020068.2