Azospirillum thermophilum strain CFH 70021 plasmid unnamed1.
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Azospirillaceae; Azospirillum.
Azospirillum thermophilum sp. nov., isolated from a hot spring
Submitted (10-MAY-2018) College of Fisheries, Henan Normal University, Jianshe Road, Xinxiang, Henan 453007, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP029356.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. September-2017; SOAPdenovo v.\n September-2017\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio; Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/04/2023 06:29:32\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,291\nCDSs (total) :: 6,196\nGenes (coding) :: 5,954\nCDSs (with protein) :: 5,954\nGenes (RNA) :: 95\nrRNAs :: 6, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 7, 7 (5S, 16S, 23S)\ntRNAs :: 71\nncRNAs :: 4\nPseudo Genes (total) :: 242\nCDSs (without protein) :: 242\nPseudo Genes (ambiguous residues) :: 0 of 242\nPseudo Genes (frameshifted) :: 175 of 242\nPseudo Genes (incomplete) :: 84 of 242\nPseudo Genes (internal stop) :: 3 of 242\nPseudo Genes (multiple problems) :: 19 of 242\nCRISPR Arrays :: 8\n##Genome-Annotation-Data-END##
type material of Azospirillum thermophilum
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_014242539.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014198182.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
MetQ/NlpA family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014198183.1
GO:0033232 - ABC-type D-methionine transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO:0048473 - D-methionine transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014198184.1
GO:0033232 - ABC-type D-methionine transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
methionine ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014198187.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189751.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198190.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198191.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011390581.1
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012566835.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198192.1
low molecular weight phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014198193.1
hybrid sensor histidine kinase/response regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014189760.1
lytic transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:YP_002517801.2
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008943487.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978001.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189763.1
GO:0008270 - zinc ion binding [Evidence IEA]
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_012335194.1
COORDINATES: similar to AA sequence:RefSeq:WP_014239358.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977055.1
COORDINATES: similar to AA sequence:RefSeq:WP_018896974.1
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977053.1
COORDINATES: similar to AA sequence:RefSeq:WP_014286798.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977051.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024770.2
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014691490.1
GO:0019172 - glyoxalase III activity [Evidence IEA]
type 1 glutamine amidotransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012527303.1
COORDINATES: similar to AA sequence:RefSeq:WP_011832001.1
COORDINATES: similar to AA sequence:RefSeq:WP_013147539.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014187974.1
COORDINATES: similar to AA sequence:RefSeq:WP_008052731.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_009027992.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013652959.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014242029.1
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014199271.1
SCP2 sterol-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014199272.1
COORDINATES: similar to AA sequence:RefSeq:WP_008971981.1
GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014242500.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189231.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240048.1
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014199284.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199283.1
COORDINATES: similar to AA sequence:RefSeq:WP_006386544.1
GO:0050304 - nitrous-oxide reductase activity [Evidence IEA]
GO:0019333 - denitrification pathway [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189252.1
nitrous oxide reductase family maturation protein NosD
COORDINATES: similar to AA sequence:RefSeq:WP_008965447.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189250.1
COORDINATES: similar to AA sequence:RefSeq:WP_014764582.1
nitrous oxide reductase accessory protein NosL
COORDINATES: similar to AA sequence:RefSeq:WP_014189248.1
GO:0017013 - protein flavinylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009540067.1
GO:0043953 - protein transport by the Tat complex [Evidence IEA]
twin-arginine translocase TatA/TatE family subunit
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012264.2
COORDINATES: similar to AA sequence:RefSeq:WP_003579193.1
COORDINATES: similar to AA sequence:RefSeq:WP_013652247.1
COORDINATES: protein motif:HMM:TIGR01730.1
COORDINATES: similar to AA sequence:RefSeq:WP_016555956.1
COORDINATES: similar to AA sequence:RefSeq:WP_008280235.1
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020395695.1
GO:0015379 - potassium:chloride symporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011385199.1
COORDINATES: protein motif:HMM:NF017050.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014871.2
GO:0016787 - hydrolase activity [Evidence IEA]
GO:0009166 - nucleotide catabolic process [Evidence IEA]
5'-nucleotidase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR00229.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO:0007165 - signal transduction [Evidence IEA]
PAS domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_012975975.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975976.1
GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014197581.1
flagellar hook-basal body complex protein
COORDINATES: similar to AA sequence:RefSeq:WP_012975978.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975979.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198132.1
TRAP transporter substrate-binding protein DctP
COORDINATES: protein motif:HMM:NF023367.2
alpha-glucosidase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012356.2
GO:0003824 - catalytic activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014197085.1
COORDINATES: similar to AA sequence:RefSeq:WP_003601980.1
COORDINATES: protein motif:HMM:NF018884.2
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012565724.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249747.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977595.1
GO:0004364 - glutathione transferase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
glutathione S-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011112110.1
GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014197122.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249725.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977607.1
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249690.1
GO:0044781 - bacterial-type flagellum organization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019013238.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249692.1
GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015920 - lipopolysaccharide transport [Evidence IEA]
LPS export ABC transporter permease LptF
COORDINATES: protein motif:HMM:NF025214.2
COORDINATES: similar to AA sequence:RefSeq:WP_014198244.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198241.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977215.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249487.1
NAD-dependent epimerase/dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014197672.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977266.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249769.1
COORDINATES: similar to AA sequence:RefSeq:WP_010489595.1
GO:0016682 - oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor [Evidence IEA]
cytochrome d ubiquinol oxidase subunit II
COORDINATES: similar to AA sequence:RefSeq:WP_004582336.1
GO:0070069 - cytochrome complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0019646 - aerobic electron transport chain [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977578.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198538.1
DUF2161 family putative PD-(D/E)XK-type phosphodiesterase
COORDINATES: protein motif:HMM:NF013965.2
GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]
GO:0006276 - plasmid maintenance [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019584372.1
type II toxin-antitoxin system CcdA family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_012977581.1
GO:0031419 - cobalamin binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004494 - methylmalonyl-CoA mutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019644372.1
GO:0015225 - biotin transmembrane transporter activity [Evidence IEA]
GO:0015878 - biotin transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249753.1
acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012977583.1
GO:0016874 - ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189845.1
short-chain fatty acyl-CoA regulator family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014198285.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188336.1
COORDINATES: similar to AA sequence:RefSeq:WP_003606640.1
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
DHA2 family efflux MFS transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012975967.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198744.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977076.1
COORDINATES: similar to AA sequence:RefSeq:WP_008839806.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198756.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975859.1
COORDINATES: similar to AA sequence:RefSeq:WP_012973575.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
GO:0002943 - tRNA dihydrouridine synthesis [Evidence IEA]
tRNA dihydrouridine(20/20a) synthase DusA
COORDINATES: protein motif:HMM:NF015431.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011298738.1
GO:0008718 - D-amino-acid dehydrogenase activity [Evidence IEA]
GO:0019478 - D-amino acid catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012974408.1
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018262605.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977550.1
GO:0008861 - formate C-acetyltransferase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011287842.1
GO:0043365 - [formate-C-acetyltransferase]-activating enzyme activity [Evidence IEA]
pyruvate formate-lyase-activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_017839788.1
COORDINATES: similar to AA sequence:RefSeq:WP_008620839.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
D-alanyl-D-alanine carboxypeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020289149.1
COORDINATES: similar to AA sequence:RefSeq:WP_013334485.1
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: similar to AA sequence:RefSeq:WP_020739594.1
COORDINATES: similar to AA sequence:RefSeq:WP_009493336.1
glycoside hydrolase family 2 TIM barrel-domain containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014850967.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012018679.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249318.1
GO:0008767 - UDP-galactopyranose mutase activity [Evidence IEA]
GO:0009273 - peptidoglycan-based cell wall biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016347930.1
COORDINATES: similar to AA sequence:RefSeq:WP_008943570.1
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014315960.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_009763807.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014199948.1
COORDINATES: similar to AA sequence:RefSeq:WP_018183276.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004274185.1
GO:0016836 - hydro-lyase activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012978499.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
SMP-30/gluconolactonase/LRE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007873996.1
GO:0009436 - glyoxylate catabolic process [Evidence IEA]; GO:0071704 - organic substance metabolic process [Evidence IEA]
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012978497.1
COORDINATES: similar to AA sequence:RefSeq:WP_007162109.1
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014250191.1
COORDINATES: similar to AA sequence:RefSeq:WP_007067023.1
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0015556 - C4-dicarboxylate transmembrane transporter activity [Evidence IEA]
GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007067024.1
COORDINATES: similar to AA sequence:RefSeq:WP_008891579.1
TRAP transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: similar to AA sequence:RefSeq:WP_019409360.1
COORDINATES: similar to AA sequence:RefSeq:WP_014492704.1
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018318479.1
COORDINATES: similar to AA sequence:RefSeq:WP_019997613.1
sialic acid TRAP transporter substrate-binding protein SiaP
COORDINATES: similar to AA sequence:RefSeq:WP_009364769.1
COORDINATES: similar to AA sequence:RefSeq:WP_012649976.1
COORDINATES: similar to AA sequence:RefSeq:WP_018263226.1
COORDINATES: similar to AA sequence:RefSeq:WP_010967295.1
GO:0016740 - transferase activity [Evidence IEA]
GO:0019475 - L-lysine catabolic process to acetate [Evidence IEA]
3-keto-5-aminohexanoate cleavage protein
COORDINATES: similar to AA sequence:RefSeq:WP_014241757.1
osmoprotectant NAGGN system M42 family peptidase
COORDINATES: similar to AA sequence:RefSeq:WP_014241756.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018260815.1
N-acetylglutaminylglutamine amidotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015887541.1
COORDINATES: similar to AA sequence:RefSeq:WP_014331062.1
GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012974078.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977639.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189379.1
COORDINATES: protein motif:HMM:NF022144.2
COORDINATES: protein motif:HMM:NF025878.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:TIGR03794.1
NHLP bacteriocin system secretion protein
COORDINATES: similar to AA sequence:RefSeq:WP_012033525.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
GO:0006508 - proteolysis [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
NHLP family bacteriocin export ABC transporter peptidase/permease/ATPase subunit
COORDINATES: protein motif:HMM:TIGR03797.1
GO:0015440 - ABC-type peptide transporter activity [Evidence IEA]
GO:0043213 - bacteriocin transport [Evidence IEA]
NHLP bacteriocin export ABC transporter permease/ATPase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012567614.1
GO:0046914 - transition metal ion binding [Evidence IEA]
GO:0055072 - iron ion homeostasis [Evidence IEA]; GO:0006811 - monoatomic ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004273869.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014197763.1
COORDINATES: similar to AA sequence:RefSeq:WP_014248665.1
GO:0008199 - ferric iron binding [Evidence IEA]; GO:0004322 - ferroxidase activity [Evidence IEA]
GO:0006880 - intracellular sequestering of iron ion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011383268.1
COORDINATES: protein motif:HMM:NF023232.2
COORDINATES: protein motif:HMM:TIGR02995.1
GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0033286 - ATPase-coupled ectoine transmembrane transporter activity [Evidence IEA]; GO:0033288 - ATPase-coupled hydroxyectoine transmembrane transporter activity [Evidence IEA]; GO:0033294 - ectoine binding [Evidence IEA]; GO:0033295 - hydroxyectoine binding [Evidence IEA]
GO:0051470 - ectoine transport [Evidence IEA]; GO:0033308 - hydroxyectoine transport [Evidence IEA]
ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB
COORDINATES: similar to AA sequence:RefSeq:WP_014197163.1
COORDINATES: protein motif:HMM:NF014567.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_012977895.1
GO:0008410 - CoA-transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006395378.1
COORDINATES: similar to AA sequence:RefSeq:WP_017701359.1
COORDINATES: similar to AA sequence:RefSeq:WP_007251122.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977875.1
carbohydrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019013754.1
TAXI family TRAP transporter solute-binding subunit
COORDINATES: protein motif:HMM:NF015658.2
COORDINATES: similar to AA sequence:RefSeq:WP_020052091.1
COORDINATES: similar to AA sequence:RefSeq:WP_008142685.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977188.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977187.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240472.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975808.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188079.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188283.1
flagellar basal body rod C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014240462.1
protein phosphatase 2C domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012975814.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188092.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188091.1
COORDINATES: similar to AA sequence:RefSeq:WP_019939563.1
GO:0006878 - cellular copper ion homeostasis [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
Cu(I)-responsive transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_018228750.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019829 - ATPase-coupled monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012621.2
GO:0046872 - metal ion binding [Evidence IEA]
heavy metal-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014188088.1
COORDINATES: similar to AA sequence:RefSeq:WP_012650598.1
GO:0036361 - racemase activity, acting on amino acids and derivatives [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
aspartate/glutamate racemase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011380202.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188086.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012975809.1
COORDINATES: similar to AA sequence:RefSeq:WP_002622699.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0140078 - class I DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014197598.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978340.1
GO:0000034 - adenine deaminase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF018389.2
COORDINATES: similar to AA sequence:RefSeq:WP_014198382.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250078.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250079.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198615.1
ABC-type transport auxiliary lipoprotein family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012978334.1
GO:0015914 - phospholipid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018250648.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978332.1
MlaE family lipid ABC transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012566635.1
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014198608.1
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014198607.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978343.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197157.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197158.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978450.1
GO:0032559 - adenyl ribonucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012567138.1
bifunctional aminoglycoside phosphotransferase/ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014197160.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250030.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978454.1
COORDINATES: similar to AA sequence:RefSeq:WP_011389230.1
zinc ribbon domain-containing protein YjdM
COORDINATES: similar to AA sequence:RefSeq:WP_014197617.1
COORDINATES: protein motif:HMM:NF024832.2
COORDINATES: protein motif:HMM:TIGR02098.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198283.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189383.1
COORDINATES: similar to AA sequence:RefSeq:WP_020590928.1
COORDINATES: protein motif:HMM:NF012311.2
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014198164.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012975686.1
COORDINATES: similar to AA sequence:RefSeq:WP_014200253.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188264.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198179.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014198178.1
GO:0004133 - glycogen debranching enzyme activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188262.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976085.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188260.1
GO:0004619 - phosphoglycerate mutase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
2,3-diphosphoglycerate-dependent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_016445845.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198170.1
GO:0016817 - hydrolase activity, acting on acid anhydrides [Evidence IEA]
SUV3 C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014198168.1
WecB/TagA/CpsF family glycosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012976089.1
polysaccharide biosynthesis tyrosine autokinase
COORDINATES: similar to AA sequence:RefSeq:WP_014188256.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198165.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188254.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188253.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198163.1
COORDINATES: protein motif:HMM:NF025104.2
COORDINATES: protein motif:HMM:NF014453.2
COORDINATES: similar to AA sequence:RefSeq:WP_014188250.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198158.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198157.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198156.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188246.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014188245.1
GO:0000036 - acyl carrier activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014198152.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198151.1
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
asparagine synthase (glutamine-hydrolyzing)
COORDINATES: similar to AA sequence:RefSeq:WP_014198150.1
GO:0008795 - NAD+ synthase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976123.1
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: similar to AA sequence:RefSeq:WP_014198147.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198146.1
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188240.1
GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
monovalent cation:proton antiporter-2 (CPA2) family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014188239.1
GO:0015419 - ABC-type sulfate transporter activity [Evidence IEA]; GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
sulfate ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014198141.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015419 - ABC-type sulfate transporter activity [Evidence IEA]
GO:0008272 - sulfate transport [Evidence IEA]
sulfate ABC transporter permease subunit CysW
COORDINATES: similar to AA sequence:RefSeq:WP_012807030.1
sulfate ABC transporter permease subunit CysT
COORDINATES: similar to AA sequence:RefSeq:WP_012976128.1
sulfate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014198136.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198135.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977520.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249527.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_014197973.1
COORDINATES: similar to AA sequence:RefSeq:WP_004274244.1
COORDINATES: similar to AA sequence:RefSeq:WP_011089384.1
COORDINATES: similar to AA sequence:RefSeq:WP_008143239.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014198220.1
COORDINATES: similar to AA sequence:RefSeq:WP_007600787.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189848.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249644.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977152.1
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014198216.1
GO:0003867 - 4-aminobutyrate transaminase activity [Evidence IEA]
GO:0009450 - gamma-aminobutyric acid catabolic process [Evidence IEA]
4-aminobutyrate--2-oxoglutarate transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_014198227.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249637.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977161.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249635.1
COORDINATES: protein motif:HMM:NF017021.2
AsmA-like C-terminal region-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977164.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977166.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197384.1
COORDINATES: similar to AA sequence:RefSeq:WP_011389837.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198335.1
COORDINATES: protein motif:HMM:NF019323.2
GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]
GO:0010951 - negative regulation of endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249626.1
MerR family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014249625.1
GO:0016746 - acyltransferase activity [Evidence IEA]
GO:0006635 - fatty acid beta-oxidation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977172.1
GO:0070403 - NAD+ binding [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249623.1
acyl-CoA dehydrogenase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014198344.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249621.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198347.1
GO:0019867 - outer membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249619.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249618.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012978404.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977850.1
COORDINATES: similar to AA sequence:RefSeq:WP_011750919.1
GO:0009055 - electron transfer activity [Evidence IEA]
cytochrome b/b6 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014241377.1
COORDINATES: similar to AA sequence:RefSeq:WP_012974321.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249916.1
GO:0006749 - glutathione metabolic process [Evidence IEA]
glutathione S-transferase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014250033.1
GO:0004416 - hydroxyacylglutathione hydrolase activity [Evidence IEA]
GO:0019243 - methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012110486.1
GO:0008168 - methyltransferase activity [Evidence IEA]
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014250035.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250036.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188094.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198393.1
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012975817.1
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014198395.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188099.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188890.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198325.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198326.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188894.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012975717.1
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012566013.1
MotA/TolQ/ExbB proton channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014188897.1
GO:0003774 - cytoskeletal motor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188898.1
COORDINATES: protein motif:HMM:TIGR00206.1
GO:0009431 - bacterial-type flagellum basal body, MS ring [Evidence IEA]
flagellar basal-body MS-ring/collar protein FliF
COORDINATES: similar to AA sequence:RefSeq:WP_014188900.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_019645701.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188903.1
COORDINATES: similar to AA sequence:RefSeq:WP_015318841.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197622.1
GO:0031419 - cobalamin binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog.; Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012975726.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975727.1
COORDINATES: similar to AA sequence:RefSeq:WP_012973618.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188324.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975999.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012976000.1
COORDINATES: protein motif:HMM:NF025072.2
COORDINATES: protein motif:HMM:NF024824.2
COORDINATES: similar to AA sequence:RefSeq:WP_014188328.1
GO:0042834 - peptidoglycan binding [Evidence IEA]; GO:0071972 - peptidoglycan L,D-transpeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014188329.1
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_014197588.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188331.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197618.1
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189570.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977868.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198359.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014198360.1
GO:0030551 - cyclic nucleotide binding [Evidence IEA]
cyclic nucleotide-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012110209.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198362.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0001072 - transcription antitermination factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008597300.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249392.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249391.1
COORDINATES: similar to AA sequence:RefSeq:WP_004271986.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014197683.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250037.1
GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: similar to AA sequence:RefSeq:WP_014250071.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197702.1
molybdenum cofactor biosynthesis protein B
COORDINATES: similar to AA sequence:RefSeq:WP_012978351.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250067.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012978353.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004174 - electron-transferring-flavoprotein dehydrogenase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
electron transfer flavoprotein-ubiquinone oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_015183034.1
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189270.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197939.1
GO:0004175 - endopeptidase activity [Evidence IEA]; GO:0009002 - serine-type D-Ala-D-Ala carboxypeptidase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
COORDINATES: protein motif:HMM:NF012708.2
GO:0051219 - phosphoprotein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977834.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
4'-phosphopantetheinyl transferase superfamily protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189574.1
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_011873511.1
D-2-hydroxyacid dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014198091.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189572.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189268.1
COORDINATES: similar to AA sequence:RefSeq:WP_010511869.1
COORDINATES: similar to AA sequence:RefSeq:WP_007587975.1
COORDINATES: similar to AA sequence:RefSeq:WP_012748395.1
COORDINATES: protein motif:HMM:NF016200.2
COORDINATES: protein motif:HMM:NF015445.2
COORDINATES: similar to AA sequence:RefSeq:WP_014197749.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189526.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189531.1
twin-arginine translocation signal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189576.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198364.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188813.1
Members of this highly hydrophobic protein family,regularly are found preceded by the yybP-ykoY manganese riboswitch (see RF00080). A metal cation transport function is proposed.; Members of this highly hydrophobic protein family,regularly are found preceded by the yybP-ykoY manganese riboswitch (see RF00080). A metal cation transport function is proposed; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012977842.1
COORDINATES: protein motif:HMM:NF015587.2
YihY/virulence factor BrkB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014197184.1
GO:0015019 - heparan-alpha-glucosaminide N-acetyltransferase activity [Evidence IEA]
GO:0007041 - lysosomal transport [Evidence IEA]
heparan-alpha-glucosaminide N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009826029.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014197613.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197612.1
GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189466.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199495.1
GO:0070403 - NAD+ binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014199609.1
COORDINATES: similar to AA sequence:RefSeq:WP_004272579.1
electron transfer flavoprotein subunit beta/FixA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012652566.1
GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012978302.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197604.1
GO:0008422 - beta-glucosidase activity [Evidence IEA]
GO:0030245 - cellulose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012482329.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0008753 - NADPH dehydrogenase (quinone) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012978304.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250107.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197600.1
GO:0042834 - peptidoglycan binding [Evidence IEA]
peptidoglycan-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014249613.1
GO:0030261 - chromosome condensation [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012977182.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249615.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977180.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014198354.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198356.1
COORDINATES: similar to AA sequence:RefSeq:WP_012974555.1
COORDINATES: similar to AA sequence:RefSeq:WP_012974554.1
GO:0003839 - gamma-glutamylcyclotransferase activity [Evidence IEA]
GO:0006751 - glutathione catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012245.2
COORDINATES: similar to AA sequence:RefSeq:WP_014248152.1
GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003265829.1
GO:0070069 - cytochrome complex [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0006119 - oxidative phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020202409.1
COORDINATES: similar to AA sequence:RefSeq:WP_020090956.1
GbsR/MarR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014626079.1
COORDINATES: similar to AA sequence:RefSeq:WP_011388785.1
GO:0015171 - amino acid transmembrane transporter activity [Evidence IEA]
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007436466.1
GO:0008851 - ethanolamine ammonia-lyase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189556.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198751.1
ATP-dependent Clp protease proteolytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014198752.1
COORDINATES: protein motif:HMM:NF012573.2
GO:0005509 - calcium ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014198753.1
COORDINATES: similar to AA sequence:RefSeq:WP_007876839.1
COORDINATES: similar to AA sequence:RefSeq:WP_019184490.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016703 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) [Evidence IEA]
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:NF036531.2
COORDINATES: similar to AA sequence:RefSeq:WP_012973724.1
GO:0009274 - peptidoglycan-based cell wall [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010627627.1
GO:0051907 - S-(hydroxymethyl)glutathione synthase activity [Evidence IEA]
GO:0046292 - formaldehyde metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014241792.1
COORDINATES: similar to AA sequence:RefSeq:WP_014247843.1
GO:0005507 - copper ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
multicopper oxidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012973727.1
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_014188122.1
COORDINATES: similar to AA sequence:RefSeq:WP_014247841.1
COORDINATES: similar to AA sequence:RefSeq:WP_015248958.1
COORDINATES: similar to AA sequence:RefSeq:WP_014247840.1
COORDINATES: similar to AA sequence:RefSeq:WP_019832531.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO:0001510 - RNA methylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016807.2
COORDINATES: protein motif:HMM:NF012797.2
COORDINATES: similar to AA sequence:RefSeq:WP_014197431.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014197430.1
COORDINATES: similar to AA sequence:RefSeq:WP_012565396.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
RsmB/NOP family class I SAM-dependent RNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014248159.1
GO:0030145 - manganese ion binding [Evidence IEA]; GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012974558.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014248157.1
COORDINATES: similar to AA sequence:RefSeq:WP_012974556.1
COORDINATES: similar to AA sequence:RefSeq:WP_018267843.1
COORDINATES: similar to AA sequence:RefSeq:WP_010340802.1
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011831073.1
COORDINATES: similar to AA sequence:RefSeq:WP_007592163.1
COORDINATES: similar to AA sequence:RefSeq:WP_012973788.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014247830.1
COORDINATES: similar to AA sequence:RefSeq:WP_014247829.1
LPS export ABC transporter permease LptG
COORDINATES: protein motif:HMM:NF025010.2
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009540684.1
GO:0050570 - 4-hydroxythreonine-4-phosphate dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO:0042823 - pyridoxal phosphate biosynthetic process [Evidence IEA]
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
COORDINATES: protein motif:HMM:NF013625.2
COORDINATES: similar to AA sequence:RefSeq:WP_012973793.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249314.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit omega
COORDINATES: similar to AA sequence:RefSeq:WP_012973795.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0015970 - guanosine tetraphosphate biosynthetic process [Evidence IEA]
bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_005797715.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004272614.1
GO:0033856 - pyridoxine 5'-phosphate synthase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014198739.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012973798.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014198742.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014198743.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014248435.1
GO:0004636 - phosphoribosyl-ATP diphosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014239997.1
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: similar to AA sequence:RefSeq:WP_008618978.1
GO:0000902 - cell morphogenesis [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014240001.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240002.1
GO:0003674 - molecular_function [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014248440.1
COORDINATES: similar to AA sequence:RefSeq:WP_012974725.1
COORDINATES: similar to AA sequence:RefSeq:WP_014241293.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977264.1
nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012978537.1
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_012978536.1
GO:0097367 - carbohydrate derivative binding [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006048735.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199637.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188426.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014240092.1
GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008946290.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012566975.1
GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_014250047.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008451726.1
COORDINATES: similar to AA sequence:RefSeq:WP_013902439.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189323.1
COORDINATES: similar to AA sequence:RefSeq:WP_018271115.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978094.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
threo-3-hydroxy-L-aspartate ammonia-lyase
COORDINATES: similar to AA sequence:RefSeq:WP_014189320.1
GO:0016853 - isomerase activity [Evidence IEA]
PhzF family phenazine biosynthesis protein
COORDINATES: similar to AA sequence:RefSeq:WP_012975744.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977212.1
GO:0004648 - O-phospho-L-serine:2-oxoglutarate aminotransferase activity [Evidence IEA]
GO:0006564 - L-serine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249523.1
ATP phosphoribosyltransferase regulatory subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011388861.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014240870.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188006.1
COORDINATES: similar to AA sequence:RefSeq:WP_007002831.1
GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014240867.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240866.1
COORDINATES: similar to AA sequence:RefSeq:WP_011432190.1
COORDINATES: similar to AA sequence:RefSeq:WP_020093459.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978427.1
COORDINATES: protein motif:HMM:NF023045.2
COORDINATES: protein motif:HMM:NF024211.2
cytochrome c oxidase accessory protein CcoG
COORDINATES: similar to AA sequence:RefSeq:WP_014249998.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249997.1
COORDINATES: similar to AA sequence:RefSeq:WP_014748605.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240341.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240343.1
COORDINATES: similar to AA sequence:RefSeq:WP_012566057.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240348.1
COORDINATES: similar to AA sequence:RefSeq:WP_012566059.1
COORDINATES: similar to AA sequence:RefSeq:WP_012566060.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249989.1
LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
branched-chain amino acid ABC transporter permease LivH
COORDINATES: similar to AA sequence:RefSeq:WP_014189441.1
GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]
high-affinity branched-chain amino acid ABC transporter permease LivM
COORDINATES: similar to AA sequence:RefSeq:WP_012978040.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978041.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240353.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240354.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0015803 - branched-chain amino acid transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
branched-chain amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015243078.1
GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO:0000373 - Group II intron splicing [Evidence IEA]
group II intron reverse transcriptase/maturase
COORDINATES: similar to AA sequence:RefSeq:WP_014240355.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249984.1
COORDINATES: similar to AA sequence:RefSeq:WP_008615649.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978406.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249981.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240360.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240362.1
COORDINATES: similar to AA sequence:RefSeq:WP_014240363.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187809.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004333 - fumarate hydratase activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014187808.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: protein motif:HMM:NF024977.2
COORDINATES: similar to AA sequence:RefSeq:WP_076612037.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003548556.1
COORDINATES: protein motif:HMM:NF013677.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014747774.1
COORDINATES: protein motif:HMM:NF037827.2
COORDINATES: protein motif:HMM:TIGR01865.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
Cas9, originally named Csn1, is the large, multifunctional signature protein of type II CRISPR/Cas systems. It is well known even to general audiences because its RNA-guided endonuclease activity has made it a popular tool for custom editing of eukaryotic genomes; Derived by automated computational analysis using gene prediction method: Protein Homology.
type II CRISPR RNA-guided endonuclease Cas9
COORDINATES: similar to AA sequence:RefSeq:WP_012973523.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0051607 - defense response to virus [Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type II CRISPR-associated endonuclease Cas1
COORDINATES: similar to AA sequence:RefSeq:WP_011809013.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976761.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976762.1
COORDINATES: similar to AA sequence:RefSeq:WP_014241412.1
class II aldolase/adducin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012976765.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_012976766.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976767.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976768.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976769.1
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012976770.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976771.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976772.1
COORDINATES: similar to AA sequence:RefSeq:WP_006226927.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976774.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975514.1
COORDINATES: similar to AA sequence:RefSeq:WP_006416569.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975562.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975563.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975564.1
COORDINATES: similar to AA sequence:RefSeq:WP_008920864.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975566.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012975567.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]
This protein belongs to a clade of uncharacterized proteins related to peroxidases such as the alkylhydroperoxidase AhpD; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003466194.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]; GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [Evidence IEA]
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
COORDINATES: similar to AA sequence:RefSeq:WP_010226780.1
COORDINATES: similar to AA sequence:RefSeq:WP_019094750.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0009231 - riboflavin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019094751.1
SUMF1/EgtB/PvdO family nonheme iron enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_004882400.1
COORDINATES: similar to AA sequence:RefSeq:WP_011355570.1
COORDINATES: similar to AA sequence:RefSeq:WP_011095360.1
COORDINATES: similar to AA sequence:RefSeq:WP_010227082.1
MexW/MexI family multidrug efflux RND transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014242033.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242034.1
COORDINATES: similar to AA sequence:RefSeq:WP_020652152.1
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
GO:0006662 - glycerol ether metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014241981.1
4Fe-4S dicluster domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014241980.1
NrfD/PsrC family molybdoenzyme membrane anchor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014241979.1
COORDINATES: similar to AA sequence:RefSeq:WP_007821040.1
COORDINATES: protein motif:HMM:NF018352.2
COORDINATES: protein motif:HMM:NF021134.2
COORDINATES: protein motif:HMM:NF014717.2
COORDINATES: similar to AA sequence:RefSeq:WP_017912707.1
COORDINATES: protein motif:HMM:NF027890.2
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_006699295.1
COORDINATES: similar to AA sequence:RefSeq:WP_003569124.1
COORDINATES: similar to AA sequence:RefSeq:WP_019649142.1
COORDINATES: protein motif:HMM:NF008630.0
galactofuranose ABC transporter, permease protein YjfF
COORDINATES: similar to AA sequence:RefSeq:WP_014250184.1
COORDINATES: similar to AA sequence:RefSeq:WP_012042345.1
COORDINATES: similar to AA sequence:RefSeq:WP_014199941.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189159.1
COORDINATES: similar to AA sequence:RefSeq:WP_006934821.1
COORDINATES: similar to AA sequence:RefSeq:WP_012240848.1
COORDINATES: similar to AA sequence:RefSeq:WP_018183256.1
COORDINATES: similar to AA sequence:RefSeq:WP_007596117.1
COORDINATES: protein motif:HMM:NF025611.2
COORDINATES: protein motif:HMM:NF027510.2
COORDINATES: protein motif:HMM:NF014385.2
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024829.2
COORDINATES: similar to AA sequence:RefSeq:WP_012351978.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014199359.1
COORDINATES: similar to AA sequence:RefSeq:WP_006410916.1
COORDINATES: similar to AA sequence:RefSeq:WP_014239832.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014239125.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: similar to AA sequence:RefSeq:WP_019903229.1
COORDINATES: similar to AA sequence:RefSeq:WP_002648002.1
GO:0052689 - carboxylic ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011194791.1
COORDINATES: similar to AA sequence:RefSeq:WP_008970925.1
COORDINATES: similar to AA sequence:RefSeq:WP_012976804.1
COORDINATES: similar to AA sequence:RefSeq:WP_020180523.1
2-oxoglutarate and iron-dependent oxygenase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012975539.1
GO:0019346 - transsulfuration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012976805.1
COORDINATES: protein motif:HMM:NF024583.2
COORDINATES: similar to AA sequence:RefSeq:WP_019863740.1
COORDINATES: similar to AA sequence:RefSeq:WP_018063956.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_002711250.1
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011427422.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014240949.1
HAMP domain-containing methyl-accepting chemotaxis protein
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: similar to AA sequence:RefSeq:WP_014197062.1
GO:1990204 - oxidoreductase complex [Evidence IEA]
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
NADH-quinone oxidoreductase subunit B family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009338241.1
GO:0016151 - nickel cation binding [Evidence IEA]
nickel-dependent hydrogenase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014197064.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197065.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197066.1
COORDINATES: similar to AA sequence:RefSeq:WP_013893335.1
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012975969.1
GO:0003729 - mRNA binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00254.1
GO:0052621 - diguanylate cyclase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
sensor domain-containing diguanylate cyclase
COORDINATES: similar to AA sequence:RefSeq:WP_016553422.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197072.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197073.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188344.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188343.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188342.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188341.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197078.1
heavy metal-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014197079.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187966.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187965.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187964.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187963.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187962.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187961.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187960.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187959.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187958.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187957.1
COORDINATES: similar to AA sequence:RefSeq:WP_017003832.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187955.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197083.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187942.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197127.1
COORDINATES: similar to AA sequence:RefSeq:WP_014187940.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249531.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197134.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197135.1
COORDINATES: similar to AA sequence:RefSeq:WP_009540647.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
SUF system Fe-S cluster assembly regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006558284.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014249538.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197139.1
COORDINATES: similar to AA sequence:RefSeq:WP_014249540.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0006534 - cysteine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008943371.1
SUF system NifU family Fe-S cluster assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_018699847.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977539.1
iron-sulfur cluster assembly accessory protein
COORDINATES: similar to AA sequence:RefSeq:WP_012568171.1
COORDINATES: protein motif:HMM:NF025217.2
COORDINATES: similar to AA sequence:RefSeq:WP_014197149.1
GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014197150.1
COORDINATES: similar to AA sequence:RefSeq:WP_014197151.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188465.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188466.1
GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
COORDINATES: similar to AA sequence:RefSeq:WP_014188467.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188468.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975785.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198647.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188064.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198649.1
COORDINATES: similar to AA sequence:RefSeq:WP_014188065.1
COORDINATES: similar to AA sequence:RefSeq:WP_012975789.1
GO:0008864 - formyltetrahydrofolate deformylase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011391011.1
prephenate/arogenate dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189663.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189664.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977929.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977930.1
COORDINATES: similar to AA sequence:RefSeq:WP_012112087.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189667.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977933.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198313.1
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0008984 - protein-glutamate methylesterase activity [Evidence IEA]; GO:0050568 - protein-glutamine glutaminase activity [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0018277 - protein deamination [Evidence IEA]; GO:0006482 - protein demethylation [Evidence IEA]
chemotaxis response regulator protein-glutamate methylesterase
COORDINATES: similar to AA sequence:RefSeq:WP_019195900.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977936.1
COORDINATES: similar to AA sequence:RefSeq:WP_012977937.1
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014189673.1
COORDINATES: similar to AA sequence:RefSeq:WP_014198308.1
histidine phosphotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014189675.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189677.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189679.1
esterase-like activity of phytase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014198731.1
histidine kinase dimerization/phosphoacceptor domain -containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012977942.1
NifB/NifX family molybdenum-iron cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014198728.1
COORDINATES: similar to AA sequence:RefSeq:WP_014246759.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242550.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242549.1
COORDINATES: similar to AA sequence:RefSeq:WP_012978371.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242547.1
COORDINATES: similar to AA sequence:RefSeq:WP_014189738.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018261721.1
COORDINATES: similar to AA sequence:RefSeq:WP_008388056.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0008983 - protein-glutamate O-methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
protein-glutamate O-methyltransferase CheR
COORDINATES: similar to AA sequence:RefSeq:WP_012977979.1
COORDINATES: similar to AA sequence:RefSeq:WP_014413829.1
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0008984 - protein-glutamate methylesterase activity [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
chemotaxis-specific protein-glutamate methyltransferase CheB
COORDINATES: similar to AA sequence:RefSeq:WP_014242543.1
COORDINATES: similar to AA sequence:RefSeq:WP_002730023.1