Aythya fuligula isolate bAytFul2 chromosome 33, bAytFul2.pri, whole genome shotgun sequence.
type: Entry
definition: Aythya fuligula isolate bAytFul2 chromosome 33, bAytFul2.pri, whole genome shotgun sequence.
sequence version: NC_045591.1
sequence date: 2020-01-30
sequence: sequence
division: CON
label: NC_045591.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA602521
dblink: SAMN12621346
keyword: WGS
keyword: RefSeq
source: Aythya fuligula (tufted duck)
organism: Aythya fuligula
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Aythyinae; Aythya.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020332.1.\nAssembly name: bAytFul2.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/12/31. The original whole-genome shotgun project has the\naccession WNMM00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 20-SEP-2019\nAssembly Method :: FALCON v. 2018.31.08-03.06; FALCON-Unzip\n v. 6.0.0.47841; purge_haplotigs v.\n v1.0.3+ 1.Nov.2018; scaff10x v. 4.1.0;\n Bionano Solve DLS v. 3.2.1; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishing\n & gap filling v. 6.0.0.47841; longranger\n align v. 2.2.2; freebayes Illumina\n polishing v. 1.3; gEVAL manual curation\n v. 2019-09-20; VGP assembly pipeline\n individual v. 1.5\nAssembly Name :: bAytFul2.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 64.03x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Aythya fuligula Annotation Release\n 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 983965
topology: linear
so has quality: SO_0000987
location: 1..983965
location: region:1-983965:1
RO_0002162: 219594

NC_045591
type: RefSeq
SIO_000068: refseq

PRJNA602521
type: BioProject
SIO_000068: bioproject

SAMN12621346
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983965:1
position: 983965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-983965:1:source
so part of: sequence
organism: Aythya fuligula
mol type: genomic DNA
isolate: bAytFul2
chromosome: 33
sex: female
tissue type: lung (powdered)
dev stage: adult
country: Sweden
lat lon: 59.8509 N 17.6300 E
collection date: 28-Aug-2017
collected by: Patrik Ellstrom, Mahmoud Naguib, Josef Jarhult

219594
type: Taxonomy
SIO_000068: taxonomy

LOC116500218
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500218
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1542..3017
location: region:1542-3017:1
so has part: feature:1542-3017:1:exon
subclass of: SO_0000010

116500218
type: Gene
SIO_000068: ncbigene

position:1542:1
position: 1542
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:3017:1
position: 3017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1542-3017:1:exon

LOC116500218
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500218
product: retinoic acid receptor RXR-beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205132.1
SIO_010081: LOC116500218
subclass of: SO_0000673
so part of: LOC116500218
location: join(<1542..1674,1777..1868,2467..2572,2663..3017)
location: region:1542-3017:1
so has part: feature:1542-1674:1:exon
so has part: feature:1777-1868:1:exon
so has part: feature:2467-2572:1:exon
so has part: feature:2663-3017:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1542-1674:1:exon

position:1674:1
position: 1674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1777-1868:1:exon

position:1777:1
position: 1777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1868:1
position: 1868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2467-2572:1:exon

position:2467:1
position: 2467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2572:1
position: 2572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2663-3017:1:exon

position:2663:1
position: 2663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500218
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500218
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 3
product: retinoic acid receptor RXR-beta
translation: WNELLIASFSHRSISVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPGEVELLREKVYASLESYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLS
SIO_010081: LOC116500218
subclass of: SO_0000673
so part of: LOC116500218
location: join(<1542..1674,1777..1868,2467..2572,2663..2810)
location: region:1542-2810:1
so has part: feature:1542-1674:1:exon
so has part: feature:1777-1868:1:exon
so has part: feature:2467-2572:1:exon
so has part: feature:2663-2810:1:exon

XP_032061023.1
type: Protein
SIO_000068: ncbiprotein

position:2810:1
position: 2810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1542-1674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1777-1868:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2467-2572:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2663-2810:1:exon

COL11A2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: COL11A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5142..26768
location: region:5142-26768:1
so has part: feature:5142-26768:1:exon
subclass of: SO_0000010

116500219
type: Gene
SIO_000068: ncbigene

position:5142:1
position: 5142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26768:1
position: 26768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5142-26768:1:exon

COL11A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: COL11A2
product: collagen type XI alpha 2 chain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 35% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205133.1
SIO_010081: COL11A2
subclass of: SO_0000673
so part of: COL11A2
location: join(5142..5208,10169..10342,10438..10648,11304..11466,12062..12187,12755..12844,13239..13358,14078..14272,14377..14418,14510..14572,14670..14744,14855..14941,15191..15247,15373..15426,15539..15592,15686..15739,16537..16590,16877..16930,17062..17106,17241..17294,17404..17448,17572..17625,17747..17791,17907..17960,18095..18139,18245..18298,18441..18485,18598..18651,19004..19111,19197..19250,19367..19420,19544..19588,19716..19769,19860..19904,19996..20049,20145..20198,20315..20368,20504..20611,20723..20812,20897..20950,21040..21147,21242..21349,21427..21480,21576..21629,21795..21902,22179..22232,22332..22385,22482..22535,22690..22743,22851..22958,23042..23095,23208..23261,23544..23597,23731..23784,23871..23978,24093..24146,24242..24295,24409..24516,24652..24705,24836..24871,24953..25006,25123..25423,25515..25627,25703..25771,26026..26259,26588..26768)
location: region:5142-26768:1
so has part: feature:5142-5208:1:exon
so has part: feature:10169-10342:1:exon
so has part: feature:10438-10648:1:exon
so has part: feature:11304-11466:1:exon
so has part: feature:12062-12187:1:exon
so has part: feature:12755-12844:1:exon
so has part: feature:13239-13358:1:exon
so has part: feature:14078-14272:1:exon
so has part: feature:14377-14418:1:exon
so has part: feature:14510-14572:1:exon
so has part: feature:14670-14744:1:exon
so has part: feature:14855-14941:1:exon
so has part: feature:15191-15247:1:exon
so has part: feature:15373-15426:1:exon
so has part: feature:15539-15592:1:exon
so has part: feature:15686-15739:1:exon
so has part: feature:16537-16590:1:exon
so has part: feature:16877-16930:1:exon
so has part: feature:17062-17106:1:exon
so has part: feature:17241-17294:1:exon
so has part: feature:17404-17448:1:exon
so has part: feature:17572-17625:1:exon
so has part: feature:17747-17791:1:exon
so has part: feature:17907-17960:1:exon
so has part: feature:18095-18139:1:exon
so has part: feature:18245-18298:1:exon
so has part: feature:18441-18485:1:exon
so has part: feature:18598-18651:1:exon
so has part: feature:19004-19111:1:exon
so has part: feature:19197-19250:1:exon
so has part: feature:19367-19420:1:exon
so has part: feature:19544-19588:1:exon
so has part: feature:19716-19769:1:exon
so has part: feature:19860-19904:1:exon
so has part: feature:19996-20049:1:exon
so has part: feature:20145-20198:1:exon
so has part: feature:20315-20368:1:exon
so has part: feature:20504-20611:1:exon
so has part: feature:20723-20812:1:exon
so has part: feature:20897-20950:1:exon
so has part: feature:21040-21147:1:exon
so has part: feature:21242-21349:1:exon
so has part: feature:21427-21480:1:exon
so has part: feature:21576-21629:1:exon
so has part: feature:21795-21902:1:exon
so has part: feature:22179-22232:1:exon
so has part: feature:22332-22385:1:exon
so has part: feature:22482-22535:1:exon
so has part: feature:22690-22743:1:exon
so has part: feature:22851-22958:1:exon
so has part: feature:23042-23095:1:exon
so has part: feature:23208-23261:1:exon
so has part: feature:23544-23597:1:exon
so has part: feature:23731-23784:1:exon
so has part: feature:23871-23978:1:exon
so has part: feature:24093-24146:1:exon
so has part: feature:24242-24295:1:exon
so has part: feature:24409-24516:1:exon
so has part: feature:24652-24705:1:exon
so has part: feature:24836-24871:1:exon
so has part: feature:24953-25006:1:exon
so has part: feature:25123-25423:1:exon
so has part: feature:25515-25627:1:exon
so has part: feature:25703-25771:1:exon
so has part: feature:26026-26259:1:exon
so has part: feature:26588-26768:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5142-5208:1:exon

position:5208:1
position: 5208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10169-10342:1:exon

position:10169:1
position: 10169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10342:1
position: 10342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10438-10648:1:exon

position:10438:1
position: 10438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10648:1
position: 10648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11304-11466:1:exon

position:11304:1
position: 11304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11466:1
position: 11466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12062-12187:1:exon

position:12062:1
position: 12062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12187:1
position: 12187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12755-12844:1:exon

position:12755:1
position: 12755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12844:1
position: 12844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13239-13358:1:exon

position:13239:1
position: 13239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13358:1
position: 13358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:14078-14272:1:exon

position:14078:1
position: 14078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14272:1
position: 14272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:14377-14418:1:exon

position:14377:1
position: 14377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14418:1
position: 14418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:14510-14572:1:exon

position:14510:1
position: 14510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14572:1
position: 14572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:14670-14744:1:exon

position:14670:1
position: 14670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14744:1
position: 14744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:14855-14941:1:exon

position:14855:1
position: 14855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14941:1
position: 14941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:15191-15247:1:exon

position:15191:1
position: 15191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15247:1
position: 15247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:15373-15426:1:exon

position:15373:1
position: 15373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15426:1
position: 15426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:15539-15592:1:exon

position:15539:1
position: 15539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15592:1
position: 15592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:15686-15739:1:exon

position:15686:1
position: 15686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15739:1
position: 15739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:16537-16590:1:exon

position:16537:1
position: 16537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16590:1
position: 16590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:16877-16930:1:exon

position:16877:1
position: 16877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16930:1
position: 16930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:17062-17106:1:exon

position:17062:1
position: 17062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17106:1
position: 17106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:17241-17294:1:exon

position:17241:1
position: 17241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17294:1
position: 17294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:17404-17448:1:exon

position:17404:1
position: 17404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17448:1
position: 17448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:17572-17625:1:exon

position:17572:1
position: 17572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17625:1
position: 17625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:17747-17791:1:exon

position:17747:1
position: 17747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17791:1
position: 17791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:17907-17960:1:exon

position:17907:1
position: 17907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17960:1
position: 17960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:18095-18139:1:exon

position:18095:1
position: 18095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18139:1
position: 18139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:18245-18298:1:exon

position:18245:1
position: 18245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18298:1
position: 18298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:18441-18485:1:exon

position:18441:1
position: 18441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18485:1
position: 18485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:18598-18651:1:exon

position:18598:1
position: 18598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18651:1
position: 18651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:19004-19111:1:exon

position:19004:1
position: 19004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19111:1
position: 19111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:19197-19250:1:exon

position:19197:1
position: 19197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19250:1
position: 19250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:19367-19420:1:exon

position:19367:1
position: 19367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19420:1
position: 19420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:19544-19588:1:exon

position:19544:1
position: 19544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19588:1
position: 19588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:19716-19769:1:exon

position:19716:1
position: 19716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19769:1
position: 19769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:19860-19904:1:exon

position:19860:1
position: 19860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19904:1
position: 19904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:19996-20049:1:exon

position:19996:1
position: 19996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20049:1
position: 20049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:20145-20198:1:exon

position:20145:1
position: 20145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20198:1
position: 20198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:20315-20368:1:exon

position:20315:1
position: 20315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20368:1
position: 20368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:20504-20611:1:exon

position:20504:1
position: 20504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20611:1
position: 20611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:20723-20812:1:exon

position:20723:1
position: 20723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20812:1
position: 20812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:20897-20950:1:exon

position:20897:1
position: 20897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20950:1
position: 20950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:21040-21147:1:exon

position:21040:1
position: 21040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21147:1
position: 21147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:21242-21349:1:exon

position:21242:1
position: 21242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21349:1
position: 21349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:21427-21480:1:exon

position:21427:1
position: 21427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21480:1
position: 21480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:21576-21629:1:exon

position:21576:1
position: 21576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21629:1
position: 21629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:21795-21902:1:exon

position:21795:1
position: 21795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21902:1
position: 21902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:22179-22232:1:exon

position:22179:1
position: 22179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22232:1
position: 22232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:22332-22385:1:exon

position:22332:1
position: 22332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22385:1
position: 22385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:22482-22535:1:exon

position:22482:1
position: 22482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22535:1
position: 22535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:22690-22743:1:exon

position:22690:1
position: 22690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22743:1
position: 22743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:22851-22958:1:exon

position:22851:1
position: 22851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22958:1
position: 22958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:23042-23095:1:exon

position:23042:1
position: 23042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23095:1
position: 23095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:23208-23261:1:exon

position:23208:1
position: 23208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23261:1
position: 23261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:23544-23597:1:exon

position:23544:1
position: 23544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23597:1
position: 23597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:23731-23784:1:exon

position:23731:1
position: 23731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23784:1
position: 23784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 55
SIO_000628: feature:23871-23978:1:exon

position:23871:1
position: 23871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23978:1
position: 23978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 56
SIO_000628: feature:24093-24146:1:exon

position:24093:1
position: 24093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24146:1
position: 24146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 57
SIO_000628: feature:24242-24295:1:exon

position:24242:1
position: 24242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24295:1
position: 24295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 58
SIO_000628: feature:24409-24516:1:exon

position:24409:1
position: 24409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24516:1
position: 24516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 59
SIO_000628: feature:24652-24705:1:exon

position:24652:1
position: 24652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24705:1
position: 24705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 60
SIO_000628: feature:24836-24871:1:exon

position:24836:1
position: 24836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24871:1
position: 24871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 61
SIO_000628: feature:24953-25006:1:exon

position:24953:1
position: 24953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25006:1
position: 25006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 62
SIO_000628: feature:25123-25423:1:exon

position:25123:1
position: 25123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25423:1
position: 25423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 63
SIO_000628: feature:25515-25627:1:exon

position:25515:1
position: 25515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25627:1
position: 25627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 64
SIO_000628: feature:25703-25771:1:exon

position:25703:1
position: 25703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25771:1
position: 25771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 65
SIO_000628: feature:26026-26259:1:exon

position:26026:1
position: 26026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26259:1
position: 26259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 66
SIO_000628: feature:26588-26768:1:exon

position:26588:1
position: 26588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COL11A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: COL11A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-2(XI) chain
translation: MAPSGPALPLALLGLSLALAAADPVDVLQVLQLHTLPEGVKKAPGFCSQHGTGDTGDTGDTAYRITRRAQLSAPTRQLFPGKFPADFSIMALVKARPGSRAFLLSVYDRDGAQRLGLELGPSPLFLYRDQGGRPAPEEYPLFRGVDLADGEWHRVALSVRGRGVTLLLDCQERGQRPLPRSPHPVLDTRGITVFGTRILDDEVFQGDIQQLLIAPDPQAAFEYCEHYAPRCAPGGPQAQEPPRQRHEYFEEDAEYYEYPYYYANSQEGPPRGGGTEQPQKPSDLDDLGDFGDFNDDFDDDFDNFDDFDDDDDDDEEHRGGRALITPVLIVCVWGGGGALINCGGGGMLTFDLLGLPPLSPPQAVRGARGYKGEKGEPAVIEPGMLVEGPPGPEGPAGMSGPPGTQGPPGAPGEPGERGPPGRAGLPGSDGTPGPPGTSMMLPFRFGSGGGDKGPAVSAQEAQAQALLQQARLALRGPPGPMGYTGRPGPMGQPGSTGMKGESGDFGPQGPRGPQGLTGPPGKPGRRGRPGADGARGMPGDPGVKGDRGFDGLPGLPGDKGHRGETGSQGMPGPPGEDGERGDDGEVGPRGLPGEAGPRGLLGPKGPPGIPGPPGVRGMDGPIGPKGNLGPQGEPGPPGQQGTPGTQGLPGPQGATGPPGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTKGHQGPSGPQGPIGYPGPRGVKGVDGIRGLKGHKGEKGEEGFPGFKGDMGVKGDRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPIGLVGEKGKLGVPGLPGYPGRQGPKGSQGFPGFPGSNGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGTSGSDGPHGPPGERGLPGPQGTNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGPAGESGPMGERGHPGPPGPPGEQGLPGPSGKEGTKGDPGPTGSPGKDGPAGLRGFPGERGLPGTPGGPGLKGNEGPAGPPGPAGSPGERGGPGQGGPVGPPGRPGPQGPPGPAGEKGVPGEKGPMGPAGRDGVQGPVGLPGPAGPPGGPGEDGDKGEVGEPGQKGSKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPAGEKGETGDVGPMGPPGPPGPRGPAGPSGADGPQGPPGGVGNLGPPGEKGDPGESGAPGIQGEPGVKGPRGERGEKGEAGAAGVAGPPGGKGPPGDDGPKGNPGPVGFPGDPGPPGEMGPRGQDGAKGERGEDGEPGEPGSPGPTGENGPPGPLGKRGPAGSPGPEGRQGEKGAKGEPGAVGAPGKTGPVGPQGLAGKQGPDGLRGLPGSVGEQGKPGTTGQAGPPGPVGPPGLPGLKGDTGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSTGQKGETGIPGATGPIGPAGPPGLPGPAGPKGAKGAMGQAGPKGERGPPGPPGHPGPPGEVIQPLPIQLPKKSKRSIDASKLVEEEEEEEEEEEGGERAAADQAAGDYAEGMEEIFGSLNSLKQEIEGMRRPMGTQDNPARTCQDLQLSHPGLPDGEYWIDPNQGCARDSFKVFCNFTAGGETCVFPSKDVEEVKVSSWEQEEPQRWFSQFKEGSRFSYTDSDGQPLGVVQLTFLRLLSVSARQNFTYHCHRSVAWHSTGTGDHRHALRFLAANEEELSYDTSPYVKAVADGCAARKGSSRTVLEVSTPRLEQLPLRDVRVVDFGEPNQRFGFEVGPVCFLG
SIO_010081: COL11A2
subclass of: SO_0000673
so part of: COL11A2
location: join(5142..5208,10169..10342,10438..10648,11304..11466,12062..12187,12755..12844,13239..13358,14078..14272,14377..14418,14510..14572,14670..14744,14855..14941,15191..15247,15373..15426,15539..15592,15686..15739,16537..16590,16877..16930,17062..17106,17241..17294,17404..17448,17572..17625,17747..17791,17907..17960,18095..18139,18245..18298,18441..18485,18598..18651,19004..19111,19197..19250,19367..19420,19544..19588,19716..19769,19860..19904,19996..20049,20145..20198,20315..20368,20504..20611,20723..20812,20897..20950,21040..21147,21242..21349,21427..21480,21576..21629,21795..21902,22179..22232,22332..22385,22482..22535,22690..22743,22851..22958,23042..23095,23208..23261,23544..23597,23731..23784,23871..23978,24093..24146,24242..24295,24409..24516,24652..24705,24836..24871,24953..25006,25123..25423,25515..25627,25703..25771,26026..26259,26588..26734)
location: region:5142-26734:1
so has part: feature:5142-5208:1:exon
so has part: feature:10169-10342:1:exon
so has part: feature:10438-10648:1:exon
so has part: feature:11304-11466:1:exon
so has part: feature:12062-12187:1:exon
so has part: feature:12755-12844:1:exon
so has part: feature:13239-13358:1:exon
so has part: feature:14078-14272:1:exon
so has part: feature:14377-14418:1:exon
so has part: feature:14510-14572:1:exon
so has part: feature:14670-14744:1:exon
so has part: feature:14855-14941:1:exon
so has part: feature:15191-15247:1:exon
so has part: feature:15373-15426:1:exon
so has part: feature:15539-15592:1:exon
so has part: feature:15686-15739:1:exon
so has part: feature:16537-16590:1:exon
so has part: feature:16877-16930:1:exon
so has part: feature:17062-17106:1:exon
so has part: feature:17241-17294:1:exon
so has part: feature:17404-17448:1:exon
so has part: feature:17572-17625:1:exon
so has part: feature:17747-17791:1:exon
so has part: feature:17907-17960:1:exon
so has part: feature:18095-18139:1:exon
so has part: feature:18245-18298:1:exon
so has part: feature:18441-18485:1:exon
so has part: feature:18598-18651:1:exon
so has part: feature:19004-19111:1:exon
so has part: feature:19197-19250:1:exon
so has part: feature:19367-19420:1:exon
so has part: feature:19544-19588:1:exon
so has part: feature:19716-19769:1:exon
so has part: feature:19860-19904:1:exon
so has part: feature:19996-20049:1:exon
so has part: feature:20145-20198:1:exon
so has part: feature:20315-20368:1:exon
so has part: feature:20504-20611:1:exon
so has part: feature:20723-20812:1:exon
so has part: feature:20897-20950:1:exon
so has part: feature:21040-21147:1:exon
so has part: feature:21242-21349:1:exon
so has part: feature:21427-21480:1:exon
so has part: feature:21576-21629:1:exon
so has part: feature:21795-21902:1:exon
so has part: feature:22179-22232:1:exon
so has part: feature:22332-22385:1:exon
so has part: feature:22482-22535:1:exon
so has part: feature:22690-22743:1:exon
so has part: feature:22851-22958:1:exon
so has part: feature:23042-23095:1:exon
so has part: feature:23208-23261:1:exon
so has part: feature:23544-23597:1:exon
so has part: feature:23731-23784:1:exon
so has part: feature:23871-23978:1:exon
so has part: feature:24093-24146:1:exon
so has part: feature:24242-24295:1:exon
so has part: feature:24409-24516:1:exon
so has part: feature:24652-24705:1:exon
so has part: feature:24836-24871:1:exon
so has part: feature:24953-25006:1:exon
so has part: feature:25123-25423:1:exon
so has part: feature:25515-25627:1:exon
so has part: feature:25703-25771:1:exon
so has part: feature:26026-26259:1:exon
so has part: feature:26588-26734:1:exon

XP_032061024.1
type: Protein
SIO_000068: ncbiprotein

position:26734:1
position: 26734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5142-5208:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10169-10342:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10438-10648:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11304-11466:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12062-12187:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12755-12844:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13239-13358:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14078-14272:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14377-14418:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14510-14572:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14670-14744:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14855-14941:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:15191-15247:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:15373-15426:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:15539-15592:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:15686-15739:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:16537-16590:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:16877-16930:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:17062-17106:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:17241-17294:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:17404-17448:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:17572-17625:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:17747-17791:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:17907-17960:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:18095-18139:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:18245-18298:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:18441-18485:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:18598-18651:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:19004-19111:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:19197-19250:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:19367-19420:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:19544-19588:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:19716-19769:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:19860-19904:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:19996-20049:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:20145-20198:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:20315-20368:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:20504-20611:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:20723-20812:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:20897-20950:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:21040-21147:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:21242-21349:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:21427-21480:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:21576-21629:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:21795-21902:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:22179-22232:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:22332-22385:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:22482-22535:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:22690-22743:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:22851-22958:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:23042-23095:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:23208-23261:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:23544-23597:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:23731-23784:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:23871-23978:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:24093-24146:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:24242-24295:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:24409-24516:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:24652-24705:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:24836-24871:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:24953-25006:1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:25123-25423:1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:25515-25627:1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:25703-25771:1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:26026-26259:1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:26588-26734:1:exon

LOC116500279
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500279
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(31324..33183)
location: region:31324-33183:-1
so has part: feature:31324-33183:-1:exon
subclass of: SO_0000010

116500279
type: Gene
SIO_000068: ncbigene

position:31324:-1
position: 31324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33183:-1
position: 33183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31324-33183:-1:exon

LOC116500279
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500279
product: HLA class II histocompatibility antigen, DR alpha chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205226.1
SIO_010081: LOC116500279
subclass of: SO_0000673
so part of: LOC116500279
location: complement(join(31324..31894,31975..32256,32452..32709,33084..33183))
location: region:31324-33183:-1
so has part: feature:33084-33183:-1:exon
so has part: feature:32452-32709:-1:exon
so has part: feature:31975-32256:-1:exon
so has part: feature:31324-31894:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33084-33183:-1:exon

position:33084:-1
position: 33084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:32452-32709:-1:exon

position:32452:-1
position: 32452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32709:-1
position: 32709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:31975-32256:-1:exon

position:31975:-1
position: 31975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32256:-1
position: 32256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:31324-31894:-1:exon

position:31894:-1
position: 31894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500279
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500279
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HLA class II histocompatibility antigen, DR alpha chain-like
translation: MAAGRGVPLVLLALLALQGSGAVKVGHVLMQTEFYQRDETHNREGGQFMFDFDGDEIFHVDLQKSETIWRLPIFTTFTSFEAQGALQNIAVDKQNMEIMMKRSNRSQGTIAPPEVTVFSEDPVELGDPNILICYVDKFWPSVITITWMKNGQEVTEGVSETVFYRQADNGFYKFSYLPFIPTRGDYYDCRVEHWGLPEPLMTHWEPQVPLPVSESTETLVCALGLAVGIVGIVVGTILIIKAMKMNNARNQRGLL
SIO_010081: LOC116500279
subclass of: SO_0000673
so part of: LOC116500279
location: complement(join(31740..31894,31975..32256,32452..32709,33084..33156))
location: region:31740-33156:-1
so has part: feature:33084-33156:-1:exon
so has part: feature:32452-32709:-1:exon
so has part: feature:31975-32256:-1:exon
so has part: feature:31740-31894:-1:exon

XP_032061117.1
type: Protein
SIO_000068: ncbiprotein

position:31740:-1
position: 31740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33156:-1
position: 33156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33084-33156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32452-32709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:31975-32256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:31740-31894:-1:exon

LOC116500208
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500208
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 33679..35549
location: region:33679-35549:1
so has part: feature:33679-35549:1:exon
subclass of: SO_0000010

116500208
type: Gene
SIO_000068: ncbigene

position:33679:1
position: 33679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35549:1
position: 35549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33679-35549:1:exon

LOC116500208
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500208
product: class II histocompatibility antigen, B-L beta chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 216 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205119.1
SIO_010081: LOC116500208
subclass of: SO_0000673
so part of: LOC116500208
location: join(33679..33770,34242..34511,34687..34968,35087..35193,35284..35307,35488..35549)
location: region:33679-35549:1
so has part: feature:33679-33770:1:exon
so has part: feature:34242-34511:1:exon
so has part: feature:34687-34968:1:exon
so has part: feature:35087-35193:1:exon
so has part: feature:35284-35307:1:exon
so has part: feature:35488-35549:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33679-33770:1:exon

position:33770:1
position: 33770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34242-34511:1:exon

position:34242:1
position: 34242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34511:1
position: 34511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:34687-34968:1:exon

position:34687:1
position: 34687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34968:1
position: 34968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:35087-35193:1:exon

position:35087:1
position: 35087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35193:1
position: 35193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:35284-35307:1:exon

position:35284:1
position: 35284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35307:1
position: 35307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:35488-35549:1:exon

position:35488:1
position: 35488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500208
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500208
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class II histocompatibility antigen, B-L beta chain-like
translation: MGSGRILGAGAVLVALVVLGARPAGGEETKGFFQKTAVSECHYLNGTERVRFLERHIYNRQQYVHFDSDVGHYVADTELGKPTADYWNSLPEEMEYKRGQVDNYCRHNYKVLENFIQNRRVEPKVRVSPMQSSSLPQTDRLACYVTGFYPADIQVKWFKNGQEETKHVVSTDVIQNGDWTYQVLVMLESTPQHGDTYECHVQHASLKSPITYEWVLPADAARGKMLTGVGGLVLGLIFLALGLFLYVRRKGASLPRLQGS
SIO_010081: LOC116500208
subclass of: SO_0000673
so part of: LOC116500208
location: join(33680..33770,34242..34511,34687..34968,35087..35193,35284..35307,35488..35496)
location: region:33680-35496:1
so has part: feature:33680-33770:1:exon
so has part: feature:34242-34511:1:exon
so has part: feature:34687-34968:1:exon
so has part: feature:35087-35193:1:exon
so has part: feature:35284-35307:1:exon
so has part: feature:35488-35496:1:exon

XP_032061010.1
type: Protein
SIO_000068: ncbiprotein

position:33680:1
position: 33680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35496:1
position: 35496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33680-33770:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34242-34511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34687-34968:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:35087-35193:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:35284-35307:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:35488-35496:1:exon

LOC116500209
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500209
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(38300..40148)
location: region:38300-40148:-1
so has part: feature:38300-40148:-1:exon
subclass of: SO_0000010

116500209
type: Gene
SIO_000068: ncbigene

position:38300:-1
position: 38300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40148:-1
position: 40148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38300-40148:-1:exon

LOC116500209
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500209
product: class II histocompatibility antigen, B-L beta chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 165 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032205120.1
SIO_010081: LOC116500209
subclass of: SO_0000673
so part of: LOC116500209
location: complement(join(38300..38339,38520..38543,38634..38740,38850..39131,39307..39576,40057..40148))
location: region:38300-40148:-1
so has part: feature:40057-40148:-1:exon
so has part: feature:39307-39576:-1:exon
so has part: feature:38850-39131:-1:exon
so has part: feature:38634-38740:-1:exon
so has part: feature:38520-38543:-1:exon
so has part: feature:38300-38339:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40057-40148:-1:exon

position:40057:-1
position: 40057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:39307-39576:-1:exon

position:39307:-1
position: 39307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39576:-1
position: 39576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:38850-39131:-1:exon

position:38850:-1
position: 38850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39131:-1
position: 39131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:38634-38740:-1:exon

position:38634:-1
position: 38634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38740:-1
position: 38740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:38520-38543:-1:exon

position:38520:-1
position: 38520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38543:-1
position: 38543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:38300-38339:-1:exon

position:38339:-1
position: 38339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500209
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500209
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class II histocompatibility antigen, B-L beta chain-like
translation: MGSGRILGAGAVLVALVVLGARPAGGEETKGFFQEMAVLECHYLNGTERVRYLERYIYNRQQYVHFDNDVGHYVADTELGKPDADYWNSQPKEMERVQANIDRFCRYNYKPLDRYILHRRVEPKVRVSPMQSSSLPQTDRLACYVTGFYPADIQVKWFKNGQEETKHVVSTDVIQNGDWTYQVLVMLESTPQHGDTYKCHVQHASLKSPITHEWVLPADAARGKMLTGVGGLVLGLIFLALGLFLYVRRKGASLPRLQGS
SIO_010081: LOC116500209
subclass of: SO_0000673
so part of: LOC116500209
location: complement(join(38331..38339,38520..38543,38634..38740,38850..39131,39307..39576,40057..40147))
location: region:38331-40147:-1
so has part: feature:40057-40147:-1:exon
so has part: feature:39307-39576:-1:exon
so has part: feature:38850-39131:-1:exon
so has part: feature:38634-38740:-1:exon
so has part: feature:38520-38543:-1:exon
so has part: feature:38331-38339:-1:exon

XP_032061011.1
type: Protein
SIO_000068: ncbiprotein

position:38331:-1
position: 38331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40147:-1
position: 40147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40057-40147:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:39307-39576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:38850-39131:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:38634-38740:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:38520-38543:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:38331-38339:-1:exon

LOC116500220
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500220
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(43030..44850)
location: region:43030-44850:-1
so has part: feature:43030-44850:-1:exon
subclass of: SO_0000010

116500220
type: Gene
SIO_000068: ncbigene

position:43030:-1
position: 43030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44850:-1
position: 44850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43030-44850:-1:exon

LOC116500220
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500220
product: class II histocompatibility antigen, B-L beta chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 187 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205134.1
SIO_010081: LOC116500220
subclass of: SO_0000673
so part of: LOC116500220
location: complement(join(43030..43038,43198..43221,43312..43418,43537..43818,43994..44260,44760..44850))
location: region:43030-44850:-1
so has part: feature:44760-44850:-1:exon
so has part: feature:43994-44260:-1:exon
so has part: feature:43537-43818:-1:exon
so has part: feature:43312-43418:-1:exon
so has part: feature:43198-43221:-1:exon
so has part: feature:43030-43038:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:44760-44850:-1:exon

position:44760:-1
position: 44760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:43994-44260:-1:exon

position:43994:-1
position: 43994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44260:-1
position: 44260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:43537-43818:-1:exon

position:43537:-1
position: 43537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43818:-1
position: 43818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:43312-43418:-1:exon

position:43312:-1
position: 43312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43418:-1
position: 43418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:43198-43221:-1:exon

position:43198:-1
position: 43198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43221:-1
position: 43221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:43030-43038:-1:exon

position:43038:-1
position: 43038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500220
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class II histocompatibility antigen, B-L beta chain-like
translation: MGSGRILGAGAVLVALVVLGARLAGGEETKGFFQEMVAFECHYLNGTEQVRYLVKYIHNRQQDVHYDSDVGHYVADTELGKPDADYWNSQPEEKERVRAEIDTVCRHNYFMASFTVDRRVEPKVRVSPMQSSSLPQTDRLACYVTGFYPADIQVKWFKNGQEETKHVVSTDVIQNGDWTYQVLVMLESTPQHGDTYECHVQHASLKSPITYEWVLPADAARGKMLTGVGGLVLGLIFLALGLFLYVRRKGASLHRLQGS
SIO_010081: LOC116500220
subclass of: SO_0000673
so part of: LOC116500220
location: complement(join(43030..43038,43198..43221,43312..43418,43537..43818,43994..44260,44760..44850))
location: region:43030-44850:-1
so has part: feature:44760-44850:-1:exon
so has part: feature:43994-44260:-1:exon
so has part: feature:43537-43818:-1:exon
so has part: feature:43312-43418:-1:exon
so has part: feature:43198-43221:-1:exon
so has part: feature:43030-43038:-1:exon

XP_032061025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44760-44850:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43994-44260:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:43537-43818:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:43312-43418:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:43198-43221:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:43030-43038:-1:exon

BRD2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: BRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(48229..53846)
location: region:48229-53846:-1
so has part: feature:48229-53846:-1:exon
subclass of: SO_0000010

116500206
type: Gene
SIO_000068: ncbigene

position:48229:-1
position: 48229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53846:-1
position: 53846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48229-53846:-1:exon

BRD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: BRD2
product: bromodomain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205115.1
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: complement(join(48229..48728,48832..48954,49050..49360,49589..49806,49886..50140,50239..50367,50477..50845,50959..51173,51278..51419,51509..51646,52699..52999,53764..53846))
location: region:48229-53846:-1
so has part: feature:53764-53846:-1:exon
so has part: feature:52699-52999:-1:exon
so has part: feature:51509-51646:-1:exon
so has part: feature:51278-51419:-1:exon
so has part: feature:50959-51173:-1:exon
so has part: feature:50477-50845:-1:exon
so has part: feature:50239-50367:-1:exon
so has part: feature:49886-50140:-1:exon
so has part: feature:49589-49806:-1:exon
so has part: feature:49050-49360:-1:exon
so has part: feature:48832-48954:-1:exon
so has part: feature:48229-48728:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53764-53846:-1:exon

position:53764:-1
position: 53764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:52699-52999:-1:exon

position:52699:-1
position: 52699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52999:-1
position: 52999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:51509-51646:-1:exon

position:51509:-1
position: 51509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51646:-1
position: 51646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:51278-51419:-1:exon

position:51278:-1
position: 51278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51419:-1
position: 51419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:50959-51173:-1:exon

position:50959:-1
position: 50959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51173:-1
position: 51173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:50477-50845:-1:exon

position:50477:-1
position: 50477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50845:-1
position: 50845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:50239-50367:-1:exon

position:50239:-1
position: 50239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50367:-1
position: 50367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:49886-50140:-1:exon

position:49886:-1
position: 49886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50140:-1
position: 50140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:49589-49806:-1:exon

position:49589:-1
position: 49589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49806:-1
position: 49806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:49050-49360:-1:exon

position:49050:-1
position: 49050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49360:-1
position: 49360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:48832-48954:-1:exon

position:48832:-1
position: 48832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48954:-1
position: 48954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:48229-48728:-1:exon

position:48728:-1
position: 48728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BRD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: BRD2
product: bromodomain containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205116.1
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: complement(join(48230..48728,48832..48954,49050..49360,49589..49767,49886..50140,50239..50367,50477..50848,50959..51173,51278..51419,51509..51646,52699..52999,53764..53846))
location: region:48230-53846:-1
so has part: feature:53764-53846:-1:exon
so has part: feature:52699-52999:-1:exon
so has part: feature:51509-51646:-1:exon
so has part: feature:51278-51419:-1:exon
so has part: feature:50959-51173:-1:exon
so has part: feature:50477-50848:-1:exon
so has part: feature:50239-50367:-1:exon
so has part: feature:49886-50140:-1:exon
so has part: feature:49589-49767:-1:exon
so has part: feature:49050-49360:-1:exon
so has part: feature:48832-48954:-1:exon
so has part: feature:48230-48728:-1:exon

position:48230:-1
position: 48230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53764-53846:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:52699-52999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51509-51646:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51278-51419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:50959-51173:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:50477-50848:-1:exon

position:50848:-1
position: 50848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:50239-50367:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:49886-50140:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:49589-49767:-1:exon

position:49767:-1
position: 49767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:49050-49360:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:48832-48954:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:48230-48728:-1:exon

BRD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: BRD2
product: bromodomain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205114.1
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: complement(join(48230..48728,48832..48954,49050..49360,49589..49806,49886..50140,50239..50367,50477..50848,50959..51173,51278..51419,51509..51646,52699..52999,53764..53846))
location: region:48230-53846:-1
so has part: feature:53764-53846:-1:exon
so has part: feature:52699-52999:-1:exon
so has part: feature:51509-51646:-1:exon
so has part: feature:51278-51419:-1:exon
so has part: feature:50959-51173:-1:exon
so has part: feature:50477-50848:-1:exon
so has part: feature:50239-50367:-1:exon
so has part: feature:49886-50140:-1:exon
so has part: feature:49589-49806:-1:exon
so has part: feature:49050-49360:-1:exon
so has part: feature:48832-48954:-1:exon
so has part: feature:48230-48728:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53764-53846:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:52699-52999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51509-51646:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51278-51419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:50959-51173:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:50477-50848:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:50239-50367:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:49886-50140:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:49589-49806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:49050-49360:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:48832-48954:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:48230-48728:-1:exon

BRD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: BRD2
product: bromodomain containing 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205117.1
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: complement(join(48230..48728,48832..48954,49050..49360,49589..49806,49886..50140,50239..50367,50477..50848,50959..51173,51278..51419,51509..51646,52074..52170,52699..52761))
location: region:48230-52761:-1
so has part: feature:52699-52761:-1:exon
so has part: feature:52074-52170:-1:exon
so has part: feature:51509-51646:-1:exon
so has part: feature:51278-51419:-1:exon
so has part: feature:50959-51173:-1:exon
so has part: feature:50477-50848:-1:exon
so has part: feature:50239-50367:-1:exon
so has part: feature:49886-50140:-1:exon
so has part: feature:49589-49806:-1:exon
so has part: feature:49050-49360:-1:exon
so has part: feature:48832-48954:-1:exon
so has part: feature:48230-48728:-1:exon

position:52761:-1
position: 52761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52699-52761:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:52074-52170:-1:exon

position:52074:-1
position: 52074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52170:-1
position: 52170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:51509-51646:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51278-51419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:50959-51173:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:50477-50848:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:50239-50367:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:49886-50140:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:49589-49806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:49050-49360:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:48832-48954:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:48230-48728:-1:exon

BRD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: BRD2
product: bromodomain containing 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205118.1
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: complement(join(48230..48728,48832..48954,49050..49360,49589..49806,49886..50140,50239..50367,50477..50848,50959..51173,51278..51419,51509..51646,52074..52170,52296..52375))
location: region:48230-52375:-1
so has part: feature:52296-52375:-1:exon
so has part: feature:52074-52170:-1:exon
so has part: feature:51509-51646:-1:exon
so has part: feature:51278-51419:-1:exon
so has part: feature:50959-51173:-1:exon
so has part: feature:50477-50848:-1:exon
so has part: feature:50239-50367:-1:exon
so has part: feature:49886-50140:-1:exon
so has part: feature:49589-49806:-1:exon
so has part: feature:49050-49360:-1:exon
so has part: feature:48832-48954:-1:exon
so has part: feature:48230-48728:-1:exon

position:52375:-1
position: 52375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52296-52375:-1:exon

position:52296:-1
position: 52296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:52074-52170:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51509-51646:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51278-51419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:50959-51173:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:50477-50848:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:50239-50367:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:49886-50140:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:49589-49806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:49050-49360:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:48832-48954:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:48230-48728:-1:exon

BRD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: BRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 2 isoform X2
translation: MLQNVNPQSKILGEGNAGLMGLATESTPGKRIRKPSLLYEGFESPTMASVPALQSPQVNPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQEIVVPVAKNSHKKGASRAAALLAGLTAAQQVPAVSSVSHSTVYAPSPDIPTTIVNIPHPSVISAPLLKSLHSTATTPAVLPTPAPTQPVAKKGVKRKADTTTPTTTAIIATSGESSPSATLLEAKAAKIPARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDEPQDASPPSVSAPLPGALSKSSSEESSSDEDEDDEDDEDDDEDESSSESSSESEESSDSEEERANRLAELQEQLRAVHEQLAALSQGPVSKPKKKREKKKKKKSEKHKGRGGGDEEARARQAQLRKAKKAGGGGGTSGGGSGGSSKNSKKAAKAALPPPPALYDSEEEEESKPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPRKPYSETMKKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKASEKPESAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: complement(join(48598..48728,48832..48954,49050..49360,49589..49806,49886..50140,50239..50367,50477..50845,50959..51173,51278..51419,51509..51646,52699..52999,53764..53792))
location: region:48598-53792:-1
so has part: feature:53764-53792:-1:exon
so has part: feature:52699-52999:-1:exon
so has part: feature:51509-51646:-1:exon
so has part: feature:51278-51419:-1:exon
so has part: feature:50959-51173:-1:exon
so has part: feature:50477-50845:-1:exon
so has part: feature:50239-50367:-1:exon
so has part: feature:49886-50140:-1:exon
so has part: feature:49589-49806:-1:exon
so has part: feature:49050-49360:-1:exon
so has part: feature:48832-48954:-1:exon
so has part: feature:48598-48728:-1:exon

XP_032061006.1
type: Protein
SIO_000068: ncbiprotein

position:48598:-1
position: 48598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53792:-1
position: 53792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53764-53792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:52699-52999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51509-51646:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51278-51419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:50959-51173:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:50477-50845:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:50239-50367:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:49886-50140:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:49589-49806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:49050-49360:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:48832-48954:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:48598-48728:-1:exon

BRD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: BRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 2 isoform X3
translation: MLQNVNPQSKILGEGNAGLMGLATESTPGKRIRKPSLLYEGFESPTMASVPALQSPQVNPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQEIVVPVAKNSHKKGASRAAALLAGLTAAQQVPAVSSVSHSTVYAPSPDIPTTIVNIPHPSVISAPLLKSLHSTATTPAVLPTPAPTQPVAKKKGVKRKADTTTPTTTAIIATSGESSPSATLLEAKAAKIPARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDEPQDASPPSVSAPLPGALSKSSSEESSSDEDEDDEDDEDDDEDESSSESSSESEESSDSEEERANRLAELQEQGPVSKPKKKREKKKKKKSEKHKGRGGGDEEARARQAQLRKAKKAGGGGGTSGGGSGGSSKNSKKAAKAALPPPPALYDSEEEEESKPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPRKPYSETMKKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKASEKPESAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: complement(join(48598..48728,48832..48954,49050..49360,49589..49767,49886..50140,50239..50367,50477..50848,50959..51173,51278..51419,51509..51646,52699..52999,53764..53792))
location: region:48598-53792:-1
so has part: feature:53764-53792:-1:exon
so has part: feature:52699-52999:-1:exon
so has part: feature:51509-51646:-1:exon
so has part: feature:51278-51419:-1:exon
so has part: feature:50959-51173:-1:exon
so has part: feature:50477-50848:-1:exon
so has part: feature:50239-50367:-1:exon
so has part: feature:49886-50140:-1:exon
so has part: feature:49589-49767:-1:exon
so has part: feature:49050-49360:-1:exon
so has part: feature:48832-48954:-1:exon
so has part: feature:48598-48728:-1:exon

XP_032061007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53764-53792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:52699-52999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51509-51646:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51278-51419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:50959-51173:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:50477-50848:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:50239-50367:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:49886-50140:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:49589-49767:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:49050-49360:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:48832-48954:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:48598-48728:-1:exon

BRD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: BRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 2 isoform X1
translation: MLQNVNPQSKILGEGNAGLMGLATESTPGKRIRKPSLLYEGFESPTMASVPALQSPQVNPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQEIVVPVAKNSHKKGASRAAALLAGLTAAQQVPAVSSVSHSTVYAPSPDIPTTIVNIPHPSVISAPLLKSLHSTATTPAVLPTPAPTQPVAKKKGVKRKADTTTPTTTAIIATSGESSPSATLLEAKAAKIPARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDEPQDASPPSVSAPLPGALSKSSSEESSSDEDEDDEDDEDDDEDESSSESSSESEESSDSEEERANRLAELQEQLRAVHEQLAALSQGPVSKPKKKREKKKKKKSEKHKGRGGGDEEARARQAQLRKAKKAGGGGGTSGGGSGGSSKNSKKAAKAALPPPPALYDSEEEEESKPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPRKPYSETMKKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKASEKPESAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: complement(join(48598..48728,48832..48954,49050..49360,49589..49806,49886..50140,50239..50367,50477..50848,50959..51173,51278..51419,51509..51646,52699..52999,53764..53792))
location: region:48598-53792:-1
so has part: feature:53764-53792:-1:exon
so has part: feature:52699-52999:-1:exon
so has part: feature:51509-51646:-1:exon
so has part: feature:51278-51419:-1:exon
so has part: feature:50959-51173:-1:exon
so has part: feature:50477-50848:-1:exon
so has part: feature:50239-50367:-1:exon
so has part: feature:49886-50140:-1:exon
so has part: feature:49589-49806:-1:exon
so has part: feature:49050-49360:-1:exon
so has part: feature:48832-48954:-1:exon
so has part: feature:48598-48728:-1:exon

XP_032061005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53764-53792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:52699-52999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51509-51646:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51278-51419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:50959-51173:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:50477-50848:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:50239-50367:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:49886-50140:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:49589-49806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:49050-49360:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:48832-48954:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:48598-48728:-1:exon

BRD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: BRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 2 isoform X4
translation: MDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQEIVVPVAKNSHKKGASRAAALLAGLTAAQQVPAVSSVSHSTVYAPSPDIPTTIVNIPHPSVISAPLLKSLHSTATTPAVLPTPAPTQPVAKKKGVKRKADTTTPTTTAIIATSGESSPSATLLEAKAAKIPARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDEPQDASPPSVSAPLPGALSKSSSEESSSDEDEDDEDDEDDDEDESSSESSSESEESSDSEEERANRLAELQEQLRAVHEQLAALSQGPVSKPKKKREKKKKKKSEKHKGRGGGDEEARARQAQLRKAKKAGGGGGTSGGGSGGSSKNSKKAAKAALPPPPALYDSEEEEESKPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPRKPYSETMKKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKASEKPESAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: complement(join(48598..48728,48832..48954,49050..49360,49589..49806,49886..50140,50239..50367,50477..50848,50959..51173,51278..51419,51509..51619))
location: region:48598-51619:-1
so has part: feature:51509-51619:-1:exon
so has part: feature:51278-51419:-1:exon
so has part: feature:50959-51173:-1:exon
so has part: feature:50477-50848:-1:exon
so has part: feature:50239-50367:-1:exon
so has part: feature:49886-50140:-1:exon
so has part: feature:49589-49806:-1:exon
so has part: feature:49050-49360:-1:exon
so has part: feature:48832-48954:-1:exon
so has part: feature:48598-48728:-1:exon

XP_032061008.1
type: Protein
SIO_000068: ncbiprotein

position:51619:-1
position: 51619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51509-51619:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:51278-51419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:50959-51173:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:50477-50848:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:50239-50367:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:49886-50140:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:49589-49806:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:49050-49360:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:48832-48954:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:48598-48728:-1:exon

BRD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: BRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 2 isoform X4
translation: MDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQEIVVPVAKNSHKKGASRAAALLAGLTAAQQVPAVSSVSHSTVYAPSPDIPTTIVNIPHPSVISAPLLKSLHSTATTPAVLPTPAPTQPVAKKKGVKRKADTTTPTTTAIIATSGESSPSATLLEAKAAKIPARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDEPQDASPPSVSAPLPGALSKSSSEESSSDEDEDDEDDEDDDEDESSSESSSESEESSDSEEERANRLAELQEQLRAVHEQLAALSQGPVSKPKKKREKKKKKKSEKHKGRGGGDEEARARQAQLRKAKKAGGGGGTSGGGSGGSSKNSKKAAKAALPPPPALYDSEEEEESKPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPRKPYSETMKKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKASEKPESAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: complement(join(48598..48728,48832..48954,49050..49360,49589..49806,49886..50140,50239..50367,50477..50848,50959..51173,51278..51419,51509..51619))
location: region:48598-51619:-1
so has part: feature:51509-51619:-1:exon
so has part: feature:51278-51419:-1:exon
so has part: feature:50959-51173:-1:exon
so has part: feature:50477-50848:-1:exon
so has part: feature:50239-50367:-1:exon
so has part: feature:49886-50140:-1:exon
so has part: feature:49589-49806:-1:exon
so has part: feature:49050-49360:-1:exon
so has part: feature:48832-48954:-1:exon
so has part: feature:48598-48728:-1:exon

XP_032061009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51509-51619:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:51278-51419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:50959-51173:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:50477-50848:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:50239-50367:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:49886-50140:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:49589-49806:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:49050-49360:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:48832-48954:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:48598-48728:-1:exon

LOC116500267
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500267
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 56511..60733
location: region:56511-60733:1
so has part: feature:56511-60733:1:exon
subclass of: SO_0000010

116500267
type: Gene
SIO_000068: ncbigene

position:56511:1
position: 56511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60733:1
position: 60733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56511-60733:1:exon

LOC116500267
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500267
product: class II histocompatibility antigen, M alpha chain, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032205209.1
SIO_010081: LOC116500267
subclass of: SO_0000673
so part of: LOC116500267
location: join(56511..56785,59708..59974,60079..60360,60439..60564,60667..60733)
location: region:56511-60733:1
so has part: feature:56511-56785:1:exon
so has part: feature:59708-59974:1:exon
so has part: feature:60079-60360:1:exon
so has part: feature:60439-60564:1:exon
so has part: feature:60667-60733:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:56511-56785:1:exon

position:56785:1
position: 56785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:59708-59974:1:exon

position:59708:1
position: 59708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59974:1
position: 59974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:60079-60360:1:exon

position:60079:1
position: 60079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60360:1
position: 60360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:60439-60564:1:exon

position:60439:1
position: 60439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60564:1
position: 60564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:60667-60733:1:exon

position:60667:1
position: 60667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500267
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500267
product: class II histocompatibility antigen, M alpha chain, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032205208.1
SIO_010081: LOC116500267
subclass of: SO_0000673
so part of: LOC116500267
location: join(57890..57965,59708..59974,60079..60360,60439..60564,60667..60733)
location: region:57890-60733:1
so has part: feature:57890-57965:1:exon
so has part: feature:59708-59974:1:exon
so has part: feature:60079-60360:1:exon
so has part: feature:60439-60564:1:exon
so has part: feature:60667-60733:1:exon

position:57890:1
position: 57890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57890-57965:1:exon

position:57965:1
position: 57965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:59708-59974:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60079-60360:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:60439-60564:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:60667-60733:1:exon

LOC116500267
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500267
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class II histocompatibility antigen, M alpha chain isoform X1
translation: MGAAGGRGALLGALLGVALVTAATPEPPVHSLAEVLFCQPDMPSLGLAVTFDEEQLFWFDAPMLRWQPRLPDFPAWPEATEPPSELVHDTTLCQDVLEFLTAYTSKYMPMAEAKGIPVANVFLKRPLELGRPNTLVCMVGNIFPPAVTIGWQRDGVPVTDGVTDTTYTPVEDLGFVRFSYLEVTPQAGDVYSCIVTRERDNTSVLTYWVPQDPVPSDVLATALCGAAMALGILLALVGLALLVATRRHRHG
SIO_010081: LOC116500267
subclass of: SO_0000673
so part of: LOC116500267
location: join(57890..57965,59708..59974,60079..60360,60439..60564,60667..60671)
location: region:57890-60671:1
so has part: feature:57890-57965:1:exon
so has part: feature:59708-59974:1:exon
so has part: feature:60079-60360:1:exon
so has part: feature:60439-60564:1:exon
so has part: feature:60667-60671:1:exon

XP_032061099.1
type: Protein
SIO_000068: ncbiprotein

position:60671:1
position: 60671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57890-57965:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:59708-59974:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60079-60360:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:60439-60564:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:60667-60671:1:exon

LOC116500267
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500267
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class II histocompatibility antigen, M alpha chain isoform X2
translation: MPSLGLAVTFDEEQLFWFDAPMLRWQPRLPDFPAWPEATEPPSELVHDTTLCQDVLEFLTAYTSKYMPMAEAKGIPVANVFLKRPLELGRPNTLVCMVGNIFPPAVTIGWQRDGVPVTDGVTDTTYTPVEDLGFVRFSYLEVTPQAGDVYSCIVTRERDNTSVLTYWVPQDPVPSDVLATALCGAAMALGILLALVGLALLVATRRHRHG
SIO_010081: LOC116500267
subclass of: SO_0000673
so part of: LOC116500267
location: join(59755..59974,60079..60360,60439..60564,60667..60671)
location: region:59755-60671:1
so has part: feature:59755-59974:1:exon
so has part: feature:60079-60360:1:exon
so has part: feature:60439-60564:1:exon
so has part: feature:60667-60671:1:exon

XP_032061100.1
type: Protein
SIO_000068: ncbiprotein

position:59755:1
position: 59755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59755-59974:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60079-60360:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60439-60564:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:60667-60671:1:exon

LOC116500221
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500221
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 60791..64944
location: region:60791-64944:1
so has part: feature:60791-64944:1:exon
subclass of: SO_0000010

116500221
type: Gene
SIO_000068: ncbigene

position:60791:1
position: 60791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64944:1
position: 64944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60791-64944:1:exon

LOC116500221
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500221
product: HLA class II histocompatibility antigen, DM beta chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 68% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205135.1
SIO_010081: LOC116500221
subclass of: SO_0000673
so part of: LOC116500221
location: join(60791..61100,61195..61473,62412..62690,62774..62893,62975..63043,64472..64944)
location: region:60791-64944:1
so has part: feature:60791-61100:1:exon
so has part: feature:61195-61473:1:exon
so has part: feature:62412-62690:1:exon
so has part: feature:62774-62893:1:exon
so has part: feature:62975-63043:1:exon
so has part: feature:64472-64944:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:60791-61100:1:exon

position:61100:1
position: 61100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:61195-61473:1:exon

position:61195:1
position: 61195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61473:1
position: 61473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:62412-62690:1:exon

position:62412:1
position: 62412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62690:1
position: 62690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:62774-62893:1:exon

position:62774:1
position: 62774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62893:1
position: 62893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:62975-63043:1:exon

position:62975:1
position: 62975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63043:1
position: 63043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:64472-64944:1:exon

position:64472:1
position: 64472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500221
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500221
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HLA class II histocompatibility antigen, DM beta chain-like
translation: MPPPGMWALGVLGLALSCRGAGAFVMHVASSCSLAANGSEQGFDFTLAFNKQPLVCYEPSARFFYPCHWGLLHGVTTVLASVLNDSSWVQRAEARRQACSDLAPHYWAQTAQRRTPPQLRVVPTPLTNVPDAVLLTCHVWGFYPPEVSVQWLHGGDVVASGDTAKLLPAGDWTYQTQVALRTTTKTGDTYTCSVQHASLEQPLRESWSPGLSREMTVMVAVAGTVLAVGLVVLAASVFIYCRQPRAEGPLGADPAPGPAPGPAPHPTPGPGAFLMQMASSCPLAANGSVMGFDFTLSFNKNPLVCYDPDTQRFVACNWGLLQRQAVQLAAQLNNGSAWVQRIEARRQACRDLALRYWDWTALRRSEPLGGLGVGPWCGGIAGECCLGCYAGLLQSVLHGAVAWRIAEECCKGHCMEVVQSLLHGVVA
SIO_010081: LOC116500221
subclass of: SO_0000673
so part of: LOC116500221
location: join(61037..61100,61195..61473,62412..62690,62774..62893,62975..63043,64472..64944)
location: region:61037-64944:1
so has part: feature:61037-61100:1:exon
so has part: feature:61195-61473:1:exon
so has part: feature:62412-62690:1:exon
so has part: feature:62774-62893:1:exon
so has part: feature:62975-63043:1:exon
so has part: feature:64472-64944:1:exon

XP_032061026.1
type: Protein
SIO_000068: ncbiprotein

position:61037:1
position: 61037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61037-61100:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:61195-61473:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:62412-62690:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:62774-62893:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:62975-63043:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:64472-64944:1:exon

MGAT1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: MGAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <65682..66858
location: region:65682-66858:1
so has part: feature:65682-66858:1:exon
subclass of: SO_0000010

116500276
type: Gene
SIO_000068: ncbigene

position:65682:1
position: 65682
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:66858:1
position: 66858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65682-66858:1:exon

MGAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: MGAT1
product: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205224.1
SIO_010081: MGAT1
subclass of: SO_0000673
so part of: MGAT1
location: <65682..66858
location: region:65682-66858:1
so has part: feature:65682-66858:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65682-66858:1:exon

MGAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: MGAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
translation: QKPPQTPSPPPVAPEGDATVLPVLVMACDRSTVRRCLDKLLRYRPSAQRFPVIVSQDCGHAETARVIASYGDAVAHIRQPELGDIPVPAEHRKFQGYYKIARHYRWALGQIFRTFRYRAAIVVEDDLEVAPDFFEYFQAAFPLLLSDRSLWCVSAWNDNGKEQMVDAGQAELLYRTDFFPGLGWLLLAELWDELEPKWPRAFWDDWMRQPEQRRGRSCIRPEVSRTMTFGRKGVSHGQFFDQYLKFIKLNDRFVPFTRLDLSYLKKEEYERSFLPRVYAAPEVRVEELQGNQRRELGAVRVQYTGRDSFKAFAKALGLMDDLKSGVPRAGYRGIVSFVYRGRRVYLAPPSDWTGYDPSWS
SIO_010081: MGAT1
subclass of: SO_0000673
so part of: MGAT1
location: <65682..66764
location: region:65682-66764:1
so has part: feature:65682-66764:1:exon

XP_032061115.1
type: Protein
SIO_000068: ncbiprotein

position:66764:1
position: 66764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65682-66764:1:exon

LOC116500222
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500222
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(71598..76422)
location: region:71598-76422:-1
so has part: feature:71598-76422:-1:exon
subclass of: SO_0000010

116500222
type: Gene
SIO_000068: ncbigene

position:71598:-1
position: 71598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76422:-1
position: 76422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71598-76422:-1:exon

LOC116500222
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500222
product: E3 ubiquitin-protein ligase TRIM58-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205136.1
SIO_010081: LOC116500222
subclass of: SO_0000673
so part of: LOC116500222
location: complement(join(71598..72174,73731..74025,74821..74976,75091..75213,76063..76422))
location: region:71598-76422:-1
so has part: feature:76063-76422:-1:exon
so has part: feature:75091-75213:-1:exon
so has part: feature:74821-74976:-1:exon
so has part: feature:73731-74025:-1:exon
so has part: feature:71598-72174:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:76063-76422:-1:exon

position:76063:-1
position: 76063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:75091-75213:-1:exon

position:75091:-1
position: 75091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75213:-1
position: 75213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:74821-74976:-1:exon

position:74821:-1
position: 74821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74976:-1
position: 74976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:73731-74025:-1:exon

position:73731:-1
position: 73731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74025:-1
position: 74025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:71598-72174:-1:exon

position:72174:-1
position: 72174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500222
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500222
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM58-like
translation: MAQGNAVRNLQEEATCAVCLDFFRQPVMLLACGHNFCRSCVARCAEKSQDGAGSCPQCRLPFPPGGFCPNRQLANVVAVVRELVEGEQDLCLGGGSRARGADLEHRVPLAEPLEDREPTPSSSTPQEPLGPPQNKMQEDERAATLLTPPGGAQQALLARVEAERQKLLAVLGGLRGVVGQQESWLLARLGHLRRGLEEAKGWRGGGNRWQFWSTKLLYFGAQNPLLLGHETLYFGAQNPLFFASLRLYSTFWGGFGVSWPGVAVLNILIFPPTRSTEPRPRPLELEAELEDFSQKNNALEAVVERLKASVTLDPATAHPQILVSPDGRSARRRKTPRDPPPGSSERFEALRCVLGRQGFAAGRHRWAVEVPPGPDWALGVAREFVPRKGCFGLSPARGVWAVGQWLGQLRALTWPSPTCLPLARVPKRIEVALDYGGGRVAFRDADSEAEIFAFPPAAFAGERLRPLLWLGEGPALLTFCP
SIO_010081: LOC116500222
subclass of: SO_0000673
so part of: LOC116500222
location: complement(join(71651..72174,73731..74025,74821..74976,75091..75213,76063..76410))
location: region:71651-76410:-1
so has part: feature:76063-76410:-1:exon
so has part: feature:75091-75213:-1:exon
so has part: feature:74821-74976:-1:exon
so has part: feature:73731-74025:-1:exon
so has part: feature:71651-72174:-1:exon

XP_032061027.1
type: Protein
SIO_000068: ncbiprotein

position:71651:-1
position: 71651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76410:-1
position: 76410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76063-76410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75091-75213:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:74821-74976:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:73731-74025:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:71651-72174:-1:exon

LOC116500223
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500223
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 78417..78965
location: region:78417-78965:1
so has part: feature:78417-78965:1:exon
subclass of: SO_0000010

116500223
type: Gene
SIO_000068: ncbigene

position:78417:1
position: 78417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78965:1
position: 78965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78417-78965:1:exon

LOC116500223
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500223
product: histone H1.01-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
transcript id: XM_032205137.1
SIO_010081: LOC116500223
subclass of: SO_0000673
so part of: LOC116500223
location: 78417..78965
location: region:78417-78965:1
so has part: feature:78417-78965:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78417-78965:1:exon

LOC116500223
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500223
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H1.01-like
translation: MPRGNTLSQPSTSRAGLAVQLPRKRGRPSLSDLILRAVCVSTARKGASLALIKKTLATEGYDVVRNSGRLKAALGGLVTKGLLQRVTGTGIAGSFRIGRVGKERMEGAARSERADGETRQRPAGKTKGPRRAVKATPQRLKKPRRPRGKTAAAPAEPAAEGAEAAGRPEAAVAAAAAVEEER
SIO_010081: LOC116500223
subclass of: SO_0000673
so part of: LOC116500223
location: 78417..78965
location: region:78417-78965:1
so has part: feature:78417-78965:1:exon

XP_032061028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78417-78965:1:exon

LOC116500273
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500273
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 85951..91075
location: region:85951-91075:1
so has part: feature:85951-91075:1:exon
subclass of: SO_0000010

116500273
type: Gene
SIO_000068: ncbigene

position:85951:1
position: 85951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91075:1
position: 91075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85951-91075:1:exon

LOC116500273
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500273
product: C-type lectin domain family 2 member D-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032205219.1
SIO_010081: LOC116500273
subclass of: SO_0000673
so part of: LOC116500273
location: join(85951..86010,87826..88052,89215..89361,89454..89611,89712..89821,89911..91075)
location: region:85951-91075:1
so has part: feature:85951-86010:1:exon
so has part: feature:87826-88052:1:exon
so has part: feature:89215-89361:1:exon
so has part: feature:89454-89611:1:exon
so has part: feature:89712-89821:1:exon
so has part: feature:89911-91075:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:85951-86010:1:exon

position:86010:1
position: 86010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:87826-88052:1:exon

position:87826:1
position: 87826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88052:1
position: 88052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:89215-89361:1:exon

position:89215:1
position: 89215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89361:1
position: 89361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:89454-89611:1:exon

position:89454:1
position: 89454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89611:1
position: 89611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:89712-89821:1:exon

position:89712:1
position: 89712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89821:1
position: 89821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:89911-91075:1:exon

position:89911:1
position: 89911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500273
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500273
product: C-type lectin domain family 2 member D-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032205218.1
SIO_010081: LOC116500273
subclass of: SO_0000673
so part of: LOC116500273
location: join(86201..86231,87826..88052,89215..89361,89454..89611,89712..89821,89911..91075)
location: region:86201-91075:1
so has part: feature:86201-86231:1:exon
so has part: feature:87826-88052:1:exon
so has part: feature:89215-89361:1:exon
so has part: feature:89454-89611:1:exon
so has part: feature:89712-89821:1:exon
so has part: feature:89911-91075:1:exon

position:86201:1
position: 86201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86201-86231:1:exon

position:86231:1
position: 86231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:87826-88052:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89215-89361:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89454-89611:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89712-89821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:89911-91075:1:exon

LOC116500273
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500273
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 2 member D-like
translation: MAVALLQGERRNEDNDSVTERKRSEAGVKQWVLGLLTRCKVKRVVAWKLCVFFGAIIVILISIIIRERSQVVSGLCPVAPAAGLSQRAYSCPRFWIGFEGKCFYFSDMEKNQTSSQADCHARGANLAVIQSEEELVFVLRYKGAPDHWIGLSRQNPRQRWEWDDGTEFNSSLFPIGGGEDFAFLNNQKVTSARSSGERHWICTRQP
SIO_010081: LOC116500273
subclass of: SO_0000673
so part of: LOC116500273
location: join(87953..88052,89215..89361,89454..89611,89712..89821,89911..90016)
location: region:87953-90016:1
so has part: feature:87953-88052:1:exon
so has part: feature:89215-89361:1:exon
so has part: feature:89454-89611:1:exon
so has part: feature:89712-89821:1:exon
so has part: feature:89911-90016:1:exon

XP_032061109.1
type: Protein
SIO_000068: ncbiprotein

position:87953:1
position: 87953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90016:1
position: 90016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87953-88052:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:89215-89361:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89454-89611:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89712-89821:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89911-90016:1:exon

LOC116500273
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500273
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 2 member D-like
translation: MAVALLQGERRNEDNDSVTERKRSEAGVKQWVLGLLTRCKVKRVVAWKLCVFFGAIIVILISIIIRERSQVVSGLCPVAPAAGLSQRAYSCPRFWIGFEGKCFYFSDMEKNQTSSQADCHARGANLAVIQSEEELVFVLRYKGAPDHWIGLSRQNPRQRWEWDDGTEFNSSLFPIGGGEDFAFLNNQKVTSARSSGERHWICTRQP
SIO_010081: LOC116500273
subclass of: SO_0000673
so part of: LOC116500273
location: join(87953..88052,89215..89361,89454..89611,89712..89821,89911..90016)
location: region:87953-90016:1
so has part: feature:87953-88052:1:exon
so has part: feature:89215-89361:1:exon
so has part: feature:89454-89611:1:exon
so has part: feature:89712-89821:1:exon
so has part: feature:89911-90016:1:exon

XP_032061110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87953-88052:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:89215-89361:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89454-89611:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89712-89821:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89911-90016:1:exon

LOC116500224
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500224
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(91780..95647)
location: region:91780-95647:-1
so has part: feature:91780-95647:-1:exon
subclass of: SO_0000010

116500224
type: Gene
SIO_000068: ncbigene

position:91780:-1
position: 91780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95647:-1
position: 95647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91780-95647:-1:exon

LOC116500224
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500224
product: C-type lectin domain family 2 member D-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205138.1
SIO_010081: LOC116500224
subclass of: SO_0000673
so part of: LOC116500224
location: complement(join(91780..92111,92673..92794,93089..93195,93577..93749,94276..94374,95590..95647))
location: region:91780-95647:-1
so has part: feature:95590-95647:-1:exon
so has part: feature:94276-94374:-1:exon
so has part: feature:93577-93749:-1:exon
so has part: feature:93089-93195:-1:exon
so has part: feature:92673-92794:-1:exon
so has part: feature:91780-92111:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95590-95647:-1:exon

position:95590:-1
position: 95590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:94276-94374:-1:exon

position:94276:-1
position: 94276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94374:-1
position: 94374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:93577-93749:-1:exon

position:93577:-1
position: 93577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93749:-1
position: 93749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:93089-93195:-1:exon

position:93089:-1
position: 93089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93195:-1
position: 93195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:92673-92794:-1:exon

position:92673:-1
position: 92673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92794:-1
position: 92794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:91780-92111:-1:exon

position:92111:-1
position: 92111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500224
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500224
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 2 member D-like
translation: MKEMREYPGFLGTERSQRGGSSLEMKPGARVACRVTMAVVFLVLLVTAIAFAVHAFQPRPQPCARCPFDWIGYRGKCYYFSEAERNWTSSQDNCSALGASLAMFDSAEDLSFTMRYKGISEHWVGLSRDGEEQPWKWVNRSRPSPLFQVQGGGFCAYLGDTGLHSSQCSTERNWVCTKPALNSPDKGETRDICTANSILGRRFFEEHRSPETVGEGVPVRIVGFVAALLFLVPFGKQQHEKRTPGASRAGSSQQAASSKSSPPVPPPGLEMEKQIRGRASSYKHLAGNATFQPCVA
SIO_010081: LOC116500224
subclass of: SO_0000673
so part of: LOC116500224
location: complement(join(91780..92111,92673..92794,93089..93195,93577..93749,94276..94374,95590..95647))
location: region:91780-95647:-1
so has part: feature:95590-95647:-1:exon
so has part: feature:94276-94374:-1:exon
so has part: feature:93577-93749:-1:exon
so has part: feature:93089-93195:-1:exon
so has part: feature:92673-92794:-1:exon
so has part: feature:91780-92111:-1:exon

XP_032061029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95590-95647:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94276-94374:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93577-93749:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:93089-93195:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92673-92794:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91780-92111:-1:exon

LOC116500226
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <99681..106168
location: region:99681-106168:1
so has part: feature:99681-106168:1:exon
subclass of: SO_0000010

116500226
type: Gene
SIO_000068: ncbigene

position:99681:1
position: 99681
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:106168:1
position: 106168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99681-106168:1:exon

LOC116500226
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500226
product: killer cell lectin-like receptor subfamily B member 1B allele A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 68% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205139.1
SIO_010081: LOC116500226
subclass of: SO_0000673
so part of: LOC116500226
location: join(<99681..99798,100175..100303,100624..100778,101196..101305,101686..101776,105474..105592,105973..106168)
location: region:99681-106168:1
so has part: feature:99681-99798:1:exon
so has part: feature:100175-100303:1:exon
so has part: feature:100624-100778:1:exon
so has part: feature:101196-101305:1:exon
so has part: feature:101686-101776:1:exon
so has part: feature:105474-105592:1:exon
so has part: feature:105973-106168:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:99681-99798:1:exon

position:99798:1
position: 99798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:100175-100303:1:exon

position:100175:1
position: 100175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100303:1
position: 100303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:100624-100778:1:exon

position:100624:1
position: 100624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100778:1
position: 100778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:101196-101305:1:exon

position:101196:1
position: 101196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101305:1
position: 101305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:101686-101776:1:exon

position:101686:1
position: 101686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101776:1
position: 101776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:105474-105592:1:exon

position:105474:1
position: 105474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105592:1
position: 105592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:105973-106168:1:exon

position:105973:1
position: 105973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500226
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: killer cell lectin-like receptor subfamily B member 1B allele A
translation: KPWTLSAPAVCPRWHGVLLKLSVLSHLVLLVLVVVLSVQVFQKTPTPPNALQTKSEAGGKNRTEVYVIHSLLCYFCRWNGSAGHGGCKLCPPSWQLFGDQCYQVSKSTGNWTDGEKDCESRGSHLAVLRNTTAMEHFSEIIHQDKQPVWIGLKASNYVWKWVDNSSFDATMFGSLGSVENGCMSFRDKKLEVNSCGSDEKWEHLNEGIQRDSKDKRPVWIGLKASKYTWKWVDNSSFDATMFSSHGNTENGCATLKDKKLEVDGCGSDHKWVCQTEPFHLLSKTAGDRDLCGAHPEKTSLQDACC
SIO_010081: LOC116500226
subclass of: SO_0000673
so part of: LOC116500226
location: join(<99681..99798,100175..100303,100624..100778,101196..101305,101686..101776,105474..105592,105973..106168)
location: region:99681-106168:1
so has part: feature:99681-99798:1:exon
so has part: feature:100175-100303:1:exon
so has part: feature:100624-100778:1:exon
so has part: feature:101196-101305:1:exon
so has part: feature:101686-101776:1:exon
so has part: feature:105474-105592:1:exon
so has part: feature:105973-106168:1:exon

XP_032061030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99681-99798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100175-100303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:100624-100778:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101196-101305:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101686-101776:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:105474-105592:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:105973-106168:1:exon

LOC116500272
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500272
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(107031..116028)
location: region:107031-116028:-1
so has part: feature:107031-116028:-1:exon
subclass of: SO_0000010

116500272
type: Gene
SIO_000068: ncbigene

position:107031:-1
position: 107031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116028:-1
position: 116028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107031-116028:-1:exon

LOC116500272
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500272
product: C-type lectin domain family 2 member B-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032205217.1
SIO_010081: LOC116500272
subclass of: SO_0000673
so part of: LOC116500272
location: complement(join(107031..107301,107597..107700,108084..108265,108608..108718,108963..109116,115845..116028))
location: region:107031-116028:-1
so has part: feature:115845-116028:-1:exon
so has part: feature:108963-109116:-1:exon
so has part: feature:108608-108718:-1:exon
so has part: feature:108084-108265:-1:exon
so has part: feature:107597-107700:-1:exon
so has part: feature:107031-107301:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:115845-116028:-1:exon

position:115845:-1
position: 115845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:108963-109116:-1:exon

position:108963:-1
position: 108963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109116:-1
position: 109116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:108608-108718:-1:exon

position:108608:-1
position: 108608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108718:-1
position: 108718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:108084-108265:-1:exon

position:108084:-1
position: 108084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108265:-1
position: 108265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:107597-107700:-1:exon

position:107597:-1
position: 107597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107700:-1
position: 107700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:107031-107301:-1:exon

position:107301:-1
position: 107301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500272
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500272
product: C-type lectin domain family 2 member B-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205216.1
SIO_010081: LOC116500272
subclass of: SO_0000673
so part of: LOC116500272
location: complement(join(107031..107301,107597..107700,108084..108265,108608..108718,108963..109125,115845..116028))
location: region:107031-116028:-1
so has part: feature:115845-116028:-1:exon
so has part: feature:108963-109125:-1:exon
so has part: feature:108608-108718:-1:exon
so has part: feature:108084-108265:-1:exon
so has part: feature:107597-107700:-1:exon
so has part: feature:107031-107301:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:115845-116028:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108963-109125:-1:exon

position:109125:-1
position: 109125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:108608-108718:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:108084-108265:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107597-107700:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:107031-107301:-1:exon

LOC116500272
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500272
product: C-type lectin domain family 2 member B-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205215.1
SIO_010081: LOC116500272
subclass of: SO_0000673
so part of: LOC116500272
location: complement(join(107031..107301,107597..107700,108084..108265,108608..108718,108963..109125,110913..111026,115845..116028))
location: region:107031-116028:-1
so has part: feature:115845-116028:-1:exon
so has part: feature:110913-111026:-1:exon
so has part: feature:108963-109125:-1:exon
so has part: feature:108608-108718:-1:exon
so has part: feature:108084-108265:-1:exon
so has part: feature:107597-107700:-1:exon
so has part: feature:107031-107301:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:115845-116028:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:110913-111026:-1:exon

position:110913:-1
position: 110913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111026:-1
position: 111026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:108963-109125:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:108608-108718:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108084-108265:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:107597-107700:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:107031-107301:-1:exon

LOC116500272
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500272
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 2 member B-like
translation: MGKGAQEKTHPDQEEVLNPPRDAEKQCKWGSSPHWMGRKCHRVQKLLTPLCVVLSVLVFVLLVALIVVRLQSHSSHPQFSDVCPAMWIGFQSKCYYFSENESNWKTSLEKCKAMEASLTSIDSQEELNFIKRYKGPANHWFGLHEEDNGQLRWTNGTAFNNWFEVRGGGPCAYVNHERISSALCNTEKYWICSRPNNYVEWRQKIYP
SIO_010081: LOC116500272
subclass of: SO_0000673
so part of: LOC116500272
location: complement(join(107163..107301,107597..107700,108084..108265,108608..108718,108963..109050))
location: region:107163-109050:-1
so has part: feature:108963-109050:-1:exon
so has part: feature:108608-108718:-1:exon
so has part: feature:108084-108265:-1:exon
so has part: feature:107597-107700:-1:exon
so has part: feature:107163-107301:-1:exon

XP_032061106.1
type: Protein
SIO_000068: ncbiprotein

position:107163:-1
position: 107163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109050:-1
position: 109050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108963-109050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108608-108718:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108084-108265:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107597-107700:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107163-107301:-1:exon

LOC116500272
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500272
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 2 member B-like
translation: MGKGAQEKTHPDQEEVLNPPRDAEKQCKWGSSPHWMGRKCHRVQKLLTPLCVVLSVLVFVLLVALIVVRLQSHSSHPQFSDVCPAMWIGFQSKCYYFSENESNWKTSLEKCKAMEASLTSIDSQEELNFIKRYKGPANHWFGLHEEDNGQLRWTNGTAFNNWFEVRGGGPCAYVNHERISSALCNTEKYWICSRPNNYVEWRQKIYP
SIO_010081: LOC116500272
subclass of: SO_0000673
so part of: LOC116500272
location: complement(join(107163..107301,107597..107700,108084..108265,108608..108718,108963..109050))
location: region:107163-109050:-1
so has part: feature:108963-109050:-1:exon
so has part: feature:108608-108718:-1:exon
so has part: feature:108084-108265:-1:exon
so has part: feature:107597-107700:-1:exon
so has part: feature:107163-107301:-1:exon

XP_032061107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108963-109050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108608-108718:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108084-108265:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107597-107700:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107163-107301:-1:exon

LOC116500272
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500272
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 2 member B-like
translation: MGKGAQEKTHPDQEEVLNPPRDAEKQCKWGSSPHWMGRKCHRVQKLLTPLCVVLSVLVFVLLVALIVVRLQSHSSHPQFSDVCPAMWIGFQSKCYYFSENESNWKTSLEKCKAMEASLTSIDSQEELNFIKRYKGPANHWFGLHEEDNGQLRWTNGTAFNNWFEVRGGGPCAYVNHERISSALCNTEKYWICSRPNNYVEWRQKIYP
SIO_010081: LOC116500272
subclass of: SO_0000673
so part of: LOC116500272
location: complement(join(107163..107301,107597..107700,108084..108265,108608..108718,108963..109050))
location: region:107163-109050:-1
so has part: feature:108963-109050:-1:exon
so has part: feature:108608-108718:-1:exon
so has part: feature:108084-108265:-1:exon
so has part: feature:107597-107700:-1:exon
so has part: feature:107163-107301:-1:exon

XP_032061108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108963-109050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108608-108718:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108084-108265:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107597-107700:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107163-107301:-1:exon

LOC116500274
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500274
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(123024..132032)
location: region:123024-132032:-1
so has part: feature:123024-132032:-1:exon
subclass of: SO_0000010

116500274
type: Gene
SIO_000068: ncbigene

position:123024:-1
position: 123024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132032:-1
position: 132032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123024-132032:-1:exon

LOC116500274
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500274
product: C-type lectin domain family 2 member A-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205222.1
SIO_010081: LOC116500274
subclass of: SO_0000673
so part of: LOC116500274
location: complement(join(123024..124067,127251..127354,127466..127641,128019..128111,128532..128585,129030..129257,131678..132032))
location: region:123024-132032:-1
so has part: feature:131678-132032:-1:exon
so has part: feature:129030-129257:-1:exon
so has part: feature:128532-128585:-1:exon
so has part: feature:128019-128111:-1:exon
so has part: feature:127466-127641:-1:exon
so has part: feature:127251-127354:-1:exon
so has part: feature:123024-124067:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:131678-132032:-1:exon

position:131678:-1
position: 131678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:129030-129257:-1:exon

position:129030:-1
position: 129030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129257:-1
position: 129257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:128532-128585:-1:exon

position:128532:-1
position: 128532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128585:-1
position: 128585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:128019-128111:-1:exon

position:128019:-1
position: 128019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128111:-1
position: 128111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:127466-127641:-1:exon

position:127466:-1
position: 127466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127641:-1
position: 127641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:127251-127354:-1:exon

position:127251:-1
position: 127251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127354:-1
position: 127354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:123024-124067:-1:exon

position:124067:-1
position: 124067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500274
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500274
product: C-type lectin domain family 2 member A-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205221.1
SIO_010081: LOC116500274
subclass of: SO_0000673
so part of: LOC116500274
location: complement(join(123024..124067,127251..127354,127466..127641,128019..128111,128532..128585,129030..129257,131077..131138,131678..132032))
location: region:123024-132032:-1
so has part: feature:131678-132032:-1:exon
so has part: feature:131077-131138:-1:exon
so has part: feature:129030-129257:-1:exon
so has part: feature:128532-128585:-1:exon
so has part: feature:128019-128111:-1:exon
so has part: feature:127466-127641:-1:exon
so has part: feature:127251-127354:-1:exon
so has part: feature:123024-124067:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:131678-132032:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131077-131138:-1:exon

position:131077:-1
position: 131077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131138:-1
position: 131138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:129030-129257:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128532-128585:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:128019-128111:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:127466-127641:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:127251-127354:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:123024-124067:-1:exon

LOC116500274
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500274
product: C-type lectin domain family 2 member A-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205223.1
SIO_010081: LOC116500274
subclass of: SO_0000673
so part of: LOC116500274
location: complement(join(123024..124067,127251..127354,127466..127641,128532..128585,129030..129257,131077..131537))
location: region:123024-131537:-1
so has part: feature:131077-131537:-1:exon
so has part: feature:129030-129257:-1:exon
so has part: feature:128532-128585:-1:exon
so has part: feature:127466-127641:-1:exon
so has part: feature:127251-127354:-1:exon
so has part: feature:123024-124067:-1:exon

position:131537:-1
position: 131537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131077-131537:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:129030-129257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128532-128585:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:127466-127641:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127251-127354:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:123024-124067:-1:exon

LOC116500274
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500274
product: C-type lectin domain family 2 member A-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205220.1
SIO_010081: LOC116500274
subclass of: SO_0000673
so part of: LOC116500274
location: complement(join(123024..124067,127251..127354,127466..127641,128019..128111,128532..128585,129030..129257,131077..131536))
location: region:123024-131536:-1
so has part: feature:131077-131536:-1:exon
so has part: feature:129030-129257:-1:exon
so has part: feature:128532-128585:-1:exon
so has part: feature:128019-128111:-1:exon
so has part: feature:127466-127641:-1:exon
so has part: feature:127251-127354:-1:exon
so has part: feature:123024-124067:-1:exon

position:131536:-1
position: 131536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131077-131536:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:129030-129257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128532-128585:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128019-128111:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127466-127641:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:127251-127354:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:123024-124067:-1:exon

LOC116500274
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500274
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 2 member A-like isoform X2
translation: MSEALPDAGEDPTAVMMSPRQGATETTRKCPSCPSPILPTCSGKGIGFREKCFYFVDVEANWNKSQSFCLSQGAQLATIDSQEDLSFLLRYGRALHFWIGLHREGSDPWRWCNGSLFNNLFDIRGNGQCAYINSDGVSSDWCSQLKYSVCSHPLQSPRGAWRGVEP
SIO_010081: LOC116500274
subclass of: SO_0000673
so part of: LOC116500274
location: complement(join(123926..124067,127251..127354,127466..127641,128532..128585,129030..129054))
location: region:123926-129054:-1
so has part: feature:129030-129054:-1:exon
so has part: feature:128532-128585:-1:exon
so has part: feature:127466-127641:-1:exon
so has part: feature:127251-127354:-1:exon
so has part: feature:123926-124067:-1:exon

XP_032061114.1
type: Protein
SIO_000068: ncbiprotein

position:123926:-1
position: 123926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129054:-1
position: 129054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129030-129054:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:128532-128585:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:127466-127641:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:127251-127354:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:123926-124067:-1:exon

LOC116500274
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500274
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 2 member A-like isoform X1
translation: MSEALPDAGEDPTAVMMSPRQGATETTFSLKCLKDKLFPIGVTVLVTALLITVIALAARKCPSCPSPILPTCSGKGIGFREKCFYFVDVEANWNKSQSFCLSQGAQLATIDSQEDLSFLLRYGRALHFWIGLHREGSDPWRWCNGSLFNNLFDIRGNGQCAYINSDGVSSDWCSQLKYSVCSHPLQSPRGAWRGVEP
SIO_010081: LOC116500274
subclass of: SO_0000673
so part of: LOC116500274
location: complement(join(123926..124067,127251..127354,127466..127641,128019..128111,128532..128585,129030..129054))
location: region:123926-129054:-1
so has part: feature:129030-129054:-1:exon
so has part: feature:128532-128585:-1:exon
so has part: feature:128019-128111:-1:exon
so has part: feature:127466-127641:-1:exon
so has part: feature:127251-127354:-1:exon
so has part: feature:123926-124067:-1:exon

XP_032061111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129030-129054:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:128532-128585:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128019-128111:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:127466-127641:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127251-127354:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:123926-124067:-1:exon

LOC116500274
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500274
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 2 member A-like isoform X1
translation: MSEALPDAGEDPTAVMMSPRQGATETTFSLKCLKDKLFPIGVTVLVTALLITVIALAARKCPSCPSPILPTCSGKGIGFREKCFYFVDVEANWNKSQSFCLSQGAQLATIDSQEDLSFLLRYGRALHFWIGLHREGSDPWRWCNGSLFNNLFDIRGNGQCAYINSDGVSSDWCSQLKYSVCSHPLQSPRGAWRGVEP
SIO_010081: LOC116500274
subclass of: SO_0000673
so part of: LOC116500274
location: complement(join(123926..124067,127251..127354,127466..127641,128019..128111,128532..128585,129030..129054))
location: region:123926-129054:-1
so has part: feature:129030-129054:-1:exon
so has part: feature:128532-128585:-1:exon
so has part: feature:128019-128111:-1:exon
so has part: feature:127466-127641:-1:exon
so has part: feature:127251-127354:-1:exon
so has part: feature:123926-124067:-1:exon

XP_032061112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129030-129054:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:128532-128585:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128019-128111:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:127466-127641:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127251-127354:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:123926-124067:-1:exon

LOC116500274
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500274
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 2 member A-like isoform X1
translation: MSEALPDAGEDPTAVMMSPRQGATETTFSLKCLKDKLFPIGVTVLVTALLITVIALAARKCPSCPSPILPTCSGKGIGFREKCFYFVDVEANWNKSQSFCLSQGAQLATIDSQEDLSFLLRYGRALHFWIGLHREGSDPWRWCNGSLFNNLFDIRGNGQCAYINSDGVSSDWCSQLKYSVCSHPLQSPRGAWRGVEP
SIO_010081: LOC116500274
subclass of: SO_0000673
so part of: LOC116500274
location: complement(join(123926..124067,127251..127354,127466..127641,128019..128111,128532..128585,129030..129054))
location: region:123926-129054:-1
so has part: feature:129030-129054:-1:exon
so has part: feature:128532-128585:-1:exon
so has part: feature:128019-128111:-1:exon
so has part: feature:127466-127641:-1:exon
so has part: feature:127251-127354:-1:exon
so has part: feature:123926-124067:-1:exon

XP_032061113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129030-129054:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:128532-128585:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128019-128111:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:127466-127641:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127251-127354:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:123926-124067:-1:exon

LOC116500271
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500271
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 132958..136870
location: region:132958-136870:1
so has part: feature:132958-136870:1:exon
subclass of: SO_0000010

116500271
type: Gene
SIO_000068: ncbigene

position:132958:1
position: 132958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136870:1
position: 136870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132958-136870:1:exon

LOC116500271
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500271
product: C-type lectin domain family 2 member B-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205212.1
SIO_010081: LOC116500271
subclass of: SO_0000673
so part of: LOC116500271
location: join(132958..133222,134841..135003,135259..135369,135707..135888,136263..136366,136662..136870)
location: region:132958-136870:1
so has part: feature:132958-133222:1:exon
so has part: feature:134841-135003:1:exon
so has part: feature:135259-135369:1:exon
so has part: feature:135707-135888:1:exon
so has part: feature:136263-136366:1:exon
so has part: feature:136662-136870:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:132958-133222:1:exon

position:133222:1
position: 133222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:134841-135003:1:exon

position:134841:1
position: 134841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135003:1
position: 135003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:135259-135369:1:exon

position:135259:1
position: 135259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135369:1
position: 135369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:135707-135888:1:exon

position:135707:1
position: 135707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135888:1
position: 135888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:136263-136366:1:exon

position:136263:1
position: 136263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136366:1
position: 136366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:136662-136870:1:exon

position:136662:1
position: 136662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500271
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500271
product: C-type lectin domain family 2 member B-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032205213.1
SIO_010081: LOC116500271
subclass of: SO_0000673
so part of: LOC116500271
location: join(132958..133222,134850..135003,135259..135369,135707..135888,136263..136366,136662..136870)
location: region:132958-136870:1
so has part: feature:132958-133222:1:exon
so has part: feature:134850-135003:1:exon
so has part: feature:135259-135369:1:exon
so has part: feature:135707-135888:1:exon
so has part: feature:136263-136366:1:exon
so has part: feature:136662-136870:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:132958-133222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134850-135003:1:exon

position:134850:1
position: 134850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:135259-135369:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:135707-135888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:136263-136366:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:136662-136870:1:exon

LOC116500271
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500271
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 2 member B-like
translation: MGKRAQEKTHSDQEEVLNPPRDEENQSKWDSSPHGMKKKCRRVQKLLTPLCVVLSVLVLVLLVALIVVRLQSRSSHSQFSDVCPDKWIVFHSKCYYFSENESNWNTSLEKCKSLEASLTSIDSLEELAFIKRYKGQANHWFGLHEDVNGQWRWTNGTAFNNWFEVRGGGPCACLNQEKISSALCQKEKYWICSKPNNYAEWRQKIYPE
SIO_010081: LOC116500271
subclass of: SO_0000673
so part of: LOC116500271
location: join(134916..135003,135259..135369,135707..135888,136263..136366,136662..136803)
location: region:134916-136803:1
so has part: feature:134916-135003:1:exon
so has part: feature:135259-135369:1:exon
so has part: feature:135707-135888:1:exon
so has part: feature:136263-136366:1:exon
so has part: feature:136662-136803:1:exon

XP_032061103.1
type: Protein
SIO_000068: ncbiprotein

position:134916:1
position: 134916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136803:1
position: 136803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134916-135003:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135259-135369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135707-135888:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:136263-136366:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:136662-136803:1:exon

LOC116500271
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500271
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 2 member B-like
translation: MGKRAQEKTHSDQEEVLNPPRDEENQSKWDSSPHGMKKKCRRVQKLLTPLCVVLSVLVLVLLVALIVVRLQSRSSHSQFSDVCPDKWIVFHSKCYYFSENESNWNTSLEKCKSLEASLTSIDSLEELAFIKRYKGQANHWFGLHEDVNGQWRWTNGTAFNNWFEVRGGGPCACLNQEKISSALCQKEKYWICSKPNNYAEWRQKIYPE
SIO_010081: LOC116500271
subclass of: SO_0000673
so part of: LOC116500271
location: join(134916..135003,135259..135369,135707..135888,136263..136366,136662..136803)
location: region:134916-136803:1
so has part: feature:134916-135003:1:exon
so has part: feature:135259-135369:1:exon
so has part: feature:135707-135888:1:exon
so has part: feature:136263-136366:1:exon
so has part: feature:136662-136803:1:exon

XP_032061104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134916-135003:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135259-135369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135707-135888:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:136263-136366:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:136662-136803:1:exon

LOC116500265
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500265
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(147055..151316)
location: region:147055-151316:-1
so has part: feature:147055-151316:-1:exon
subclass of: SO_0000010

116500265
type: Gene
SIO_000068: ncbigene

position:147055:-1
position: 147055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151316:-1
position: 151316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147055-151316:-1:exon

LOC116500265
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500265
product: C-type lectin domain family 2 member B-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205207.1
SIO_010081: LOC116500265
subclass of: SO_0000673
so part of: LOC116500265
location: complement(join(147055..147563,147678..147778,147919..148097,148522..148605,148823..149017,150490..150652,151288..151316))
location: region:147055-151316:-1
so has part: feature:151288-151316:-1:exon
so has part: feature:150490-150652:-1:exon
so has part: feature:148823-149017:-1:exon
so has part: feature:148522-148605:-1:exon
so has part: feature:147919-148097:-1:exon
so has part: feature:147678-147778:-1:exon
so has part: feature:147055-147563:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:151288-151316:-1:exon

position:151288:-1
position: 151288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:150490-150652:-1:exon

position:150490:-1
position: 150490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150652:-1
position: 150652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:148823-149017:-1:exon

position:148823:-1
position: 148823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149017:-1
position: 149017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:148522-148605:-1:exon

position:148522:-1
position: 148522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148605:-1
position: 148605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:147919-148097:-1:exon

position:147919:-1
position: 147919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148097:-1
position: 148097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:147678-147778:-1:exon

position:147678:-1
position: 147678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147778:-1
position: 147778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:147055-147563:-1:exon

position:147563:-1
position: 147563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500265
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500265
product: C-type lectin domain family 2 member B-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205206.1
SIO_010081: LOC116500265
subclass of: SO_0000673
so part of: LOC116500265
location: complement(join(147055..147563,147678..147778,147919..148097,148522..148605,148823..149020,150490..150652,151288..151316))
location: region:147055-151316:-1
so has part: feature:151288-151316:-1:exon
so has part: feature:150490-150652:-1:exon
so has part: feature:148823-149020:-1:exon
so has part: feature:148522-148605:-1:exon
so has part: feature:147919-148097:-1:exon
so has part: feature:147678-147778:-1:exon
so has part: feature:147055-147563:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:151288-151316:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:150490-150652:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:148823-149020:-1:exon

position:149020:-1
position: 149020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:148522-148605:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:147919-148097:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:147678-147778:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:147055-147563:-1:exon

LOC116500265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500265
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 2 member B-like isoform X2
translation: MGKGDCENTHPEEEEELNPPRDEENLHKYAPMPSDVLSTPGAVNTMVQDEQSGLTSQYEDPDQPQDPQDTAATSSVAKSTDAAPTDRNRTQRCLGRVCTTQRQRDVLLILTLMLILSMVVLIATRKQQETAPVLACPYKWVGYRNVCYYLSGQQEQGNWSWSQEQCSRHGASLVVVKKDWELKFLRQFKDSGDSWLGLRRRGEQLRWVDGSSFNLTFPVQGVAECVYLNGEDVATSSCWQSRPYICSKPQAVGAAPEKDGGERTFSMLDTGSSSH
SIO_010081: LOC116500265
subclass of: SO_0000673
so part of: LOC116500265
location: complement(join(147383..147563,147678..147778,147919..148097,148522..148605,148823..149017,150490..150577))
location: region:147383-150577:-1
so has part: feature:150490-150577:-1:exon
so has part: feature:148823-149017:-1:exon
so has part: feature:148522-148605:-1:exon
so has part: feature:147919-148097:-1:exon
so has part: feature:147678-147778:-1:exon
so has part: feature:147383-147563:-1:exon

XP_032061098.1
type: Protein
SIO_000068: ncbiprotein

position:147383:-1
position: 147383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150577:-1
position: 150577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150490-150577:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:148823-149017:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:148522-148605:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147919-148097:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:147678-147778:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:147383-147563:-1:exon

LOC116500265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500265
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 2 member B-like isoform X1
translation: MGKGDCENTHPEEEEELNPPRDEENLHKYAAPMPSDVLSTPGAVNTMVQDEQSGLTSQYEDPDQPQDPQDTAATSSVAKSTDAAPTDRNRTQRCLGRVCTTQRQRDVLLILTLMLILSMVVLIATRKQQETAPVLACPYKWVGYRNVCYYLSGQQEQGNWSWSQEQCSRHGASLVVVKKDWELKFLRQFKDSGDSWLGLRRRGEQLRWVDGSSFNLTFPVQGVAECVYLNGEDVATSSCWQSRPYICSKPQAVGAAPEKDGGERTFSMLDTGSSSH
SIO_010081: LOC116500265
subclass of: SO_0000673
so part of: LOC116500265
location: complement(join(147383..147563,147678..147778,147919..148097,148522..148605,148823..149020,150490..150577))
location: region:147383-150577:-1
so has part: feature:150490-150577:-1:exon
so has part: feature:148823-149020:-1:exon
so has part: feature:148522-148605:-1:exon
so has part: feature:147919-148097:-1:exon
so has part: feature:147678-147778:-1:exon
so has part: feature:147383-147563:-1:exon

XP_032061097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150490-150577:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:148823-149020:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:148522-148605:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147919-148097:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:147678-147778:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:147383-147563:-1:exon

LOC116500251
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500251
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 156769..164610
location: region:156769-164610:1
so has part: feature:156769-164610:1:exon
subclass of: SO_0000010

116500251
type: Gene
SIO_000068: ncbigene

position:156769:1
position: 156769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164610:1
position: 164610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156769-164610:1:exon

LOC116500251
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500251
product: zinc finger protein 692-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032205182.1
SIO_010081: LOC116500251
subclass of: SO_0000673
so part of: LOC116500251
location: join(156769..156958,157054..157085,157533..157943,158416..158464,158675..158821,159744..159872,162357..162419,162650..162728,163125..163239,163542..163641,164075..164610)
location: region:156769-164610:1
so has part: feature:156769-156958:1:exon
so has part: feature:157054-157085:1:exon
so has part: feature:157533-157943:1:exon
so has part: feature:158416-158464:1:exon
so has part: feature:158675-158821:1:exon
so has part: feature:159744-159872:1:exon
so has part: feature:162357-162419:1:exon
so has part: feature:162650-162728:1:exon
so has part: feature:163125-163239:1:exon
so has part: feature:163542-163641:1:exon
so has part: feature:164075-164610:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:156769-156958:1:exon

position:156958:1
position: 156958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:157054-157085:1:exon

position:157054:1
position: 157054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157085:1
position: 157085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:157533-157943:1:exon

position:157533:1
position: 157533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157943:1
position: 157943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:158416-158464:1:exon

position:158416:1
position: 158416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158464:1
position: 158464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:158675-158821:1:exon

position:158675:1
position: 158675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158821:1
position: 158821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:159744-159872:1:exon

position:159744:1
position: 159744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159872:1
position: 159872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:162357-162419:1:exon

position:162357:1
position: 162357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162419:1
position: 162419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:162650-162728:1:exon

position:162650:1
position: 162650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162728:1
position: 162728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:163125-163239:1:exon

position:163125:1
position: 163125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163239:1
position: 163239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:163542-163641:1:exon

position:163542:1
position: 163542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163641:1
position: 163641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:164075-164610:1:exon

position:164075:1
position: 164075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500251
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500251
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 692-like
translation: MDPGRPGRQRAPDCVRRQKRRELDARRSKCRIRLGGHLEQWCRLKEQLGFALHSQLAKFLLDRYSSQGCVLSPGPSTPEPSLLHADALQRLVALSHGHGQECGFVPDVKPPASGSPAQLVWECVAGHSFSWGVPTVADGQQPWGVTEEDLGSNSPPVPRRRQSLRRAGLVAEPKVDGSSPKKDGAEAEVAAWSPAGDGNQREEAGESSDGAPQGQMEVATTGLDHESTPALEEKPEQGSASQEEEEEEEDEDFAEDDDLAYTDDLRDENYHPSLDSDSELQRRQSQPKSRKKPVKEEQSPSEPSPIDSSPAEERGGRVSCKRRTRSCDEDVAQIGPKRIRKAAKREILLCDFEGCGKIFSNRQYLNHHKKYQHVHQKTFTCSEPSCGKSFNFKKHLKEHEKLHSDKRDYICEFCARSFRTSSNLIIHRRIHTGEKPLQCEICGFTCRQKASLNWHMKKHDADSFYQFSCDICGKKFEKRDNVTAHKSKSHPETPGGPPQAVPASPPSLLGAGMGQTEALGVFGAEQEEPPSREDEGEAEKSGASAE
SIO_010081: LOC116500251
subclass of: SO_0000673
so part of: LOC116500251
location: join(156771..156958,157054..157085,157533..157943,158416..158464,158675..158821,159744..159872,162357..162419,162650..162728,163125..163239,163542..163641,164075..164402)
location: region:156771-164402:1
so has part: feature:156771-156958:1:exon
so has part: feature:157054-157085:1:exon
so has part: feature:157533-157943:1:exon
so has part: feature:158416-158464:1:exon
so has part: feature:158675-158821:1:exon
so has part: feature:159744-159872:1:exon
so has part: feature:162357-162419:1:exon
so has part: feature:162650-162728:1:exon
so has part: feature:163125-163239:1:exon
so has part: feature:163542-163641:1:exon
so has part: feature:164075-164402:1:exon

XP_032061073.1
type: Protein
SIO_000068: ncbiprotein

position:156771:1
position: 156771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164402:1
position: 164402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156771-156958:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:157054-157085:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:157533-157943:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158416-158464:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:158675-158821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:159744-159872:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:162357-162419:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:162650-162728:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:163125-163239:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:163542-163641:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:164075-164402:1:exon

LOC116500253
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500253
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(165726..172455)
location: region:165726-172455:-1
so has part: feature:165726-172455:-1:exon
subclass of: SO_0000010

116500253
type: Gene
SIO_000068: ncbigene

position:165726:-1
position: 165726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172455:-1
position: 172455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165726-172455:-1:exon

LOC116500253
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500253
product: E3 ubiquitin-protein ligase TRIM7-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205187.1
SIO_010081: LOC116500253
subclass of: SO_0000673
so part of: LOC116500253
location: complement(join(165726..167213,167966..167998,168324..168439,168525..168547,169178..169405,169504..169590,171873..172455))
location: region:165726-172455:-1
so has part: feature:171873-172455:-1:exon
so has part: feature:169504-169590:-1:exon
so has part: feature:169178-169405:-1:exon
so has part: feature:168525-168547:-1:exon
so has part: feature:168324-168439:-1:exon
so has part: feature:167966-167998:-1:exon
so has part: feature:165726-167213:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:171873-172455:-1:exon

position:171873:-1
position: 171873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:169504-169590:-1:exon

position:169504:-1
position: 169504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169590:-1
position: 169590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:169178-169405:-1:exon

position:169178:-1
position: 169178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169405:-1
position: 169405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:168525-168547:-1:exon

position:168525:-1
position: 168525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168547:-1
position: 168547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:168324-168439:-1:exon

position:168324:-1
position: 168324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168439:-1
position: 168439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:167966-167998:-1:exon

position:167966:-1
position: 167966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167998:-1
position: 167998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:165726-167213:-1:exon

position:167213:-1
position: 167213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500253
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500253
product: E3 ubiquitin-protein ligase TRIM7-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205186.1
SIO_010081: LOC116500253
subclass of: SO_0000673
so part of: LOC116500253
location: complement(join(165726..167213,167966..167998,168324..168439,168525..168547,169178..169405,169504..169608,171873..172455))
location: region:165726-172455:-1
so has part: feature:171873-172455:-1:exon
so has part: feature:169504-169608:-1:exon
so has part: feature:169178-169405:-1:exon
so has part: feature:168525-168547:-1:exon
so has part: feature:168324-168439:-1:exon
so has part: feature:167966-167998:-1:exon
so has part: feature:165726-167213:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:171873-172455:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169504-169608:-1:exon

position:169608:-1
position: 169608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:169178-169405:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:168525-168547:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:168324-168439:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:167966-167998:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165726-167213:-1:exon

LOC116500253
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500253
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM7-like isoform X2
translation: MEAPPAPPAVPPAPCSAARSLQDELTCPVCLEYFTDPVLVAECGHNFCRACVTQCWEDSARRLCCPQCREPVPQRLFRPNRSLGNIVHIVRQLGLPPGPAEPPPGPPAPSPPLPAAAPPGPPGPPRCPRHGEPLRLFCVQDRRAVCVVCHLSREHRTHTVLPAEEAAHAAEEVPQEHLSSLRKGREEAKAEREKQSEDLLKQTEVERQKIVAECKELRGFLEEKEQLLLSRLEELDRDIVKRRDESVSRLSEEIAQLDKLLGEQGGENGPGNQSGQVVTTAGSSFESWMFCKPEAGFAELEKKLKSFSQKSAVLKEVLLEFKENLRFELENDTGDLSLDPDTANPYLVLSEDKRSVRLRSAPQELPANPKRFDYSFCVLAAEGFVAGRHYWEVEVGDGESWVLGAARESVRRKEKIDFAPEEGIWAVGLNWKGKNWDQYQAFTSPETPLSLCERPRKIGVYLDYEGGWVAFYNADNMAPIFTFTAVFTEKIFPFFWLFYVGSSLSLCN
SIO_010081: LOC116500253
subclass of: SO_0000673
so part of: LOC116500253
location: complement(join(166687..167213,167966..167998,168324..168439,168525..168547,169178..169405,169504..169590,171873..172385))
location: region:166687-172385:-1
so has part: feature:171873-172385:-1:exon
so has part: feature:169504-169590:-1:exon
so has part: feature:169178-169405:-1:exon
so has part: feature:168525-168547:-1:exon
so has part: feature:168324-168439:-1:exon
so has part: feature:167966-167998:-1:exon
so has part: feature:166687-167213:-1:exon

XP_032061078.1
type: Protein
SIO_000068: ncbiprotein

position:166687:-1
position: 166687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172385:-1
position: 172385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171873-172385:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169504-169590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:169178-169405:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:168525-168547:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:168324-168439:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:167966-167998:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:166687-167213:-1:exon

LOC116500253
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500253
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM7-like isoform X1
translation: MEAPPAPPAVPPAPCSAARSLQDELTCPVCLEYFTDPVLVAECGHNFCRACVTQCWEDSARRLCCPQCREPVPQRLFRPNRSLGNIVHIVRQLGLPPGPAEPPPGPPAPSPPLPAAAPPGPPGPPRCPRHGEPLRLFCVQDRRAVCVVCHLSREHRTHTVLPAEEAAHAAEISSSFQEVPQEHLSSLRKGREEAKAEREKQSEDLLKQTEVERQKIVAECKELRGFLEEKEQLLLSRLEELDRDIVKRRDESVSRLSEEIAQLDKLLGEQGGENGPGNQSGQVVTTAGSSFESWMFCKPEAGFAELEKKLKSFSQKSAVLKEVLLEFKENLRFELENDTGDLSLDPDTANPYLVLSEDKRSVRLRSAPQELPANPKRFDYSFCVLAAEGFVAGRHYWEVEVGDGESWVLGAARESVRRKEKIDFAPEEGIWAVGLNWKGKNWDQYQAFTSPETPLSLCERPRKIGVYLDYEGGWVAFYNADNMAPIFTFTAVFTEKIFPFFWLFYVGSSLSLCN
SIO_010081: LOC116500253
subclass of: SO_0000673
so part of: LOC116500253
location: complement(join(166687..167213,167966..167998,168324..168439,168525..168547,169178..169405,169504..169608,171873..172385))
location: region:166687-172385:-1
so has part: feature:171873-172385:-1:exon
so has part: feature:169504-169608:-1:exon
so has part: feature:169178-169405:-1:exon
so has part: feature:168525-168547:-1:exon
so has part: feature:168324-168439:-1:exon
so has part: feature:167966-167998:-1:exon
so has part: feature:166687-167213:-1:exon

XP_032061077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171873-172385:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169504-169608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:169178-169405:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:168525-168547:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:168324-168439:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:167966-167998:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:166687-167213:-1:exon

LOC116500227
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500227
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 176029..180891
location: region:176029-180891:1
so has part: feature:176029-180891:1:exon
subclass of: SO_0000010

116500227
type: Gene
SIO_000068: ncbigene

position:176029:1
position: 176029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180891:1
position: 180891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176029-180891:1:exon

LOC116500227
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500227
product: zinc finger protein 345-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205140.1
SIO_010081: LOC116500227
subclass of: SO_0000673
so part of: LOC116500227
location: join(176029..176123,177156..177265,177436..177534,177965..179678,180810..180891)
location: region:176029-180891:1
so has part: feature:176029-176123:1:exon
so has part: feature:177156-177265:1:exon
so has part: feature:177436-177534:1:exon
so has part: feature:177965-179678:1:exon
so has part: feature:180810-180891:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:176029-176123:1:exon

position:176123:1
position: 176123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:177156-177265:1:exon

position:177156:1
position: 177156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177265:1
position: 177265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:177436-177534:1:exon

position:177436:1
position: 177436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177534:1
position: 177534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:177965-179678:1:exon

position:177965:1
position: 177965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179678:1
position: 179678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:180810-180891:1:exon

position:180810:1
position: 180810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500227
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500227
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 345-like
translation: MEPYVLLDPRQRALYRDVMQESYETLMALEFPVSKPDLLSRLAHEGEPTALDLQVPKDAPSGEDGARAEQEPPGEETVEKEPETSKPTAEEHPSSPAEVKAGGSGEAPPQRAPQPGTTCGECGKSFSHKSALVKHQKIHSGDRPHECPDCGKGFIQRSDLTIHQRVHTGERPYACPDCGRRFSVSSSLLTHQRTHAPGGQKPNRCPQCGRSFADPGALDRHQKSHLGGKPYECGVCGKAFAWSSHLERHRRIHTGEKPFQCAQCGRAFAWSSHLDRHMRTHAAAAASEEEEEEEEEDEEEEEEPPPPPPQKCADCGKRLNHQTDPRRFKHKGTQTPPLGDDPLSSPPRPYRCEQCGKSFAHGSDLLKHQRVHTGERPYPCPDCQRCFRWGSALAKHRRTHARQQPLAKSCAEESGAGGKPYPCGACGKSFGWVSHLERHRRVHTGEKPFRCGECGRAFAVSSHLERHRRVHTGERPYRCGDCGKSFAVSSTLLAHRRTHVAQAGRPHACPECGKGFGTPLSLERHRRLHRGEKPYQCGVCGKGFAWSSHYDRHRLTHTGEKPFSCAHCGKRFGRSSHRNRHQRAHGAGGAEKRHGCPQCGKAFGLAAALAAHQRLHAAAATAGSSGLSLLPPSCPKKQTRDGAGTNNHVFWHKDSPSNPC
SIO_010081: LOC116500227
subclass of: SO_0000673
so part of: LOC116500227
location: join(177178..177265,177436..177534,177965..179678,180810..180891)
location: region:177178-180891:1
so has part: feature:177178-177265:1:exon
so has part: feature:177436-177534:1:exon
so has part: feature:177965-179678:1:exon
so has part: feature:180810-180891:1:exon

XP_032061031.1
type: Protein
SIO_000068: ncbiprotein

position:177178:1
position: 177178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177178-177265:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:177436-177534:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:177965-179678:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:180810-180891:1:exon

LOC116500255
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(180831..184015)
location: region:180831-184015:-1
so has part: feature:180831-184015:-1:exon
subclass of: SO_0000010

116500255
type: Gene
SIO_000068: ncbigene

position:180831:-1
position: 180831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184015:-1
position: 184015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180831-184015:-1:exon

LOC116500255
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500255
product: zinc finger protein CKR1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032205190.1
SIO_010081: LOC116500255
subclass of: SO_0000673
so part of: LOC116500255
location: complement(join(180831..182489,182907..183064,183964..184015))
location: region:180831-184015:-1
so has part: feature:183964-184015:-1:exon
so has part: feature:182907-183064:-1:exon
so has part: feature:180831-182489:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183964-184015:-1:exon

position:183964:-1
position: 183964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:182907-183064:-1:exon

position:182907:-1
position: 182907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183064:-1
position: 183064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:180831-182489:-1:exon

position:182489:-1
position: 182489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500255
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500255
product: zinc finger protein CKR1-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205192.1
SIO_010081: LOC116500255
subclass of: SO_0000673
so part of: LOC116500255
location: complement(join(180831..182486,182907..183064,183656..183786))
location: region:180831-183786:-1
so has part: feature:183656-183786:-1:exon
so has part: feature:182907-183064:-1:exon
so has part: feature:180831-182486:-1:exon

position:183786:-1
position: 183786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183656-183786:-1:exon

position:183656:-1
position: 183656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:182907-183064:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:180831-182486:-1:exon

position:182486:-1
position: 182486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500255
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500255
product: zinc finger protein CKR1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205189.1
SIO_010081: LOC116500255
subclass of: SO_0000673
so part of: LOC116500255
location: complement(join(180831..182489,182907..183064,183656..183786))
location: region:180831-183786:-1
so has part: feature:183656-183786:-1:exon
so has part: feature:182907-183064:-1:exon
so has part: feature:180831-182489:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183656-183786:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182907-183064:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:180831-182489:-1:exon

LOC116500255
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500255
product: zinc finger protein CKR1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205191.1
SIO_010081: LOC116500255
subclass of: SO_0000673
so part of: LOC116500255
location: complement(join(180831..182489,182907..183132))
location: region:180831-183132:-1
so has part: feature:182907-183132:-1:exon
so has part: feature:180831-182489:-1:exon

position:183132:-1
position: 183132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182907-183132:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:180831-182489:-1:exon

LOC116500255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein CKR1-like isoform X2
translation: MEPWVMLDPRQKALYRDVMQESYETLMSLAQGLVSEKAAEEGAAQQIPEELEARPSRSPERAKTLGSNRRKTKRPDKAVPHGLAKLPKTTPAPKLDCAKPLRGGAGAKGSARERPYGCADCGKSFPWASHLERHRRVHTGERPFGCPECGETYSQSSHLLQHRRTHASDRPHKCGECGKRFAGAAELAAHGRGHAAEKPHKCGDCGKGFVWASHLARHRRVHTGEKPFGCPECGEAFTQGSHLAKHRRSHTGERPHRCPACGKTFGQSSDLARHRRTHLGKKALRCGDCGKLFRAGPALARHQQGHRRERAHRCGDCGKGFVWASHLERHRRVHTGERPFPCGSCGERFAQKAHLLQHRKTHSPERPYKCGECGKRFGEAPPFLAHQRGHAAQKSYTCGECGKGFAWASHLERHRRVHTGEKPYECPECGEAFSQSSHLTKHRRSHLPKVDFSPSSRTRPAGGKPPAAPRLANPPRECSGEEQ
SIO_010081: LOC116500255
subclass of: SO_0000673
so part of: LOC116500255
location: complement(join(181123..182486,182907..182994))
location: region:181123-182994:-1
so has part: feature:182907-182994:-1:exon
so has part: feature:181123-182486:-1:exon

XP_032061083.1
type: Protein
SIO_000068: ncbiprotein

position:181123:-1
position: 181123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182994:-1
position: 182994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182907-182994:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181123-182486:-1:exon

LOC116500255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein CKR1-like isoform X1
translation: MEPWVMLDPRQKALYRDVMQESYETLMSLAAQGLVSEKAAEEGAAQQIPEELEARPSRSPERAKTLGSNRRKTKRPDKAVPHGLAKLPKTTPAPKLDCAKPLRGGAGAKGSARERPYGCADCGKSFPWASHLERHRRVHTGERPFGCPECGETYSQSSHLLQHRRTHASDRPHKCGECGKRFAGAAELAAHGRGHAAEKPHKCGDCGKGFVWASHLARHRRVHTGEKPFGCPECGEAFTQGSHLAKHRRSHTGERPHRCPACGKTFGQSSDLARHRRTHLGKKALRCGDCGKLFRAGPALARHQQGHRRERAHRCGDCGKGFVWASHLERHRRVHTGERPFPCGSCGERFAQKAHLLQHRKTHSPERPYKCGECGKRFGEAPPFLAHQRGHAAQKSYTCGECGKGFAWASHLERHRRVHTGEKPYECPECGEAFSQSSHLTKHRRSHLPKVDFSPSSRTRPAGGKPPAAPRLANPPRECSGEEQ
SIO_010081: LOC116500255
subclass of: SO_0000673
so part of: LOC116500255
location: complement(join(181123..182489,182907..182994))
location: region:181123-182994:-1
so has part: feature:182907-182994:-1:exon
so has part: feature:181123-182489:-1:exon

XP_032061080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182907-182994:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181123-182489:-1:exon

LOC116500255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein CKR1-like isoform X1
translation: MEPWVMLDPRQKALYRDVMQESYETLMSLAAQGLVSEKAAEEGAAQQIPEELEARPSRSPERAKTLGSNRRKTKRPDKAVPHGLAKLPKTTPAPKLDCAKPLRGGAGAKGSARERPYGCADCGKSFPWASHLERHRRVHTGERPFGCPECGETYSQSSHLLQHRRTHASDRPHKCGECGKRFAGAAELAAHGRGHAAEKPHKCGDCGKGFVWASHLARHRRVHTGEKPFGCPECGEAFTQGSHLAKHRRSHTGERPHRCPACGKTFGQSSDLARHRRTHLGKKALRCGDCGKLFRAGPALARHQQGHRRERAHRCGDCGKGFVWASHLERHRRVHTGERPFPCGSCGERFAQKAHLLQHRKTHSPERPYKCGECGKRFGEAPPFLAHQRGHAAQKSYTCGECGKGFAWASHLERHRRVHTGEKPYECPECGEAFSQSSHLTKHRRSHLPKVDFSPSSRTRPAGGKPPAAPRLANPPRECSGEEQ
SIO_010081: LOC116500255
subclass of: SO_0000673
so part of: LOC116500255
location: complement(join(181123..182489,182907..182994))
location: region:181123-182994:-1
so has part: feature:182907-182994:-1:exon
so has part: feature:181123-182489:-1:exon

XP_032061081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182907-182994:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181123-182489:-1:exon

LOC116500255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein CKR1-like isoform X1
translation: MEPWVMLDPRQKALYRDVMQESYETLMSLAAQGLVSEKAAEEGAAQQIPEELEARPSRSPERAKTLGSNRRKTKRPDKAVPHGLAKLPKTTPAPKLDCAKPLRGGAGAKGSARERPYGCADCGKSFPWASHLERHRRVHTGERPFGCPECGETYSQSSHLLQHRRTHASDRPHKCGECGKRFAGAAELAAHGRGHAAEKPHKCGDCGKGFVWASHLARHRRVHTGEKPFGCPECGEAFTQGSHLAKHRRSHTGERPHRCPACGKTFGQSSDLARHRRTHLGKKALRCGDCGKLFRAGPALARHQQGHRRERAHRCGDCGKGFVWASHLERHRRVHTGERPFPCGSCGERFAQKAHLLQHRKTHSPERPYKCGECGKRFGEAPPFLAHQRGHAAQKSYTCGECGKGFAWASHLERHRRVHTGEKPYECPECGEAFSQSSHLTKHRRSHLPKVDFSPSSRTRPAGGKPPAAPRLANPPRECSGEEQ
SIO_010081: LOC116500255
subclass of: SO_0000673
so part of: LOC116500255
location: complement(join(181123..182489,182907..182994))
location: region:181123-182994:-1
so has part: feature:182907-182994:-1:exon
so has part: feature:181123-182489:-1:exon

XP_032061082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182907-182994:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181123-182489:-1:exon

IL4I1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: IL4I1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 182993..198618
location: region:182993-198618:1
so has part: feature:182993-198618:1:exon
subclass of: SO_0000010

116500228
type: Gene
SIO_000068: ncbigene

position:182993:1
position: 182993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198618:1
position: 198618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182993-198618:1:exon

IL4I1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: IL4I1
product: interleukin 4 induced 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205141.1
SIO_010081: IL4I1
subclass of: SO_0000673
so part of: IL4I1
location: join(182993..183023,183761..183874,195089..195303,195952..196064,196428..196629,197010..197078,197459..197595,197790..198618)
location: region:182993-198618:1
so has part: feature:182993-183023:1:exon
so has part: feature:183761-183874:1:exon
so has part: feature:195089-195303:1:exon
so has part: feature:195952-196064:1:exon
so has part: feature:196428-196629:1:exon
so has part: feature:197010-197078:1:exon
so has part: feature:197459-197595:1:exon
so has part: feature:197790-198618:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:182993-183023:1:exon

position:183023:1
position: 183023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:183761-183874:1:exon

position:183761:1
position: 183761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183874:1
position: 183874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:195089-195303:1:exon

position:195089:1
position: 195089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195303:1
position: 195303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:195952-196064:1:exon

position:195952:1
position: 195952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196064:1
position: 196064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:196428-196629:1:exon

position:196428:1
position: 196428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196629:1
position: 196629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:197010-197078:1:exon

position:197010:1
position: 197010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197078:1
position: 197078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:197459-197595:1:exon

position:197459:1
position: 197459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197595:1
position: 197595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:197790-198618:1:exon

position:197790:1
position: 197790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IL4I1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: IL4I1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: L-amino-acid oxidase
translation: MARGGGHGNKAGHNGGDAGHGFAPEAQAGIRQKGDAKKKLRSYPEPSRVLFQILLLVGLVSAKRFSCFPEYCLNDGDYEELLDIVRHGLGPATKPANVVIVGAGISGLTAAKLLRDAGHKVTILETSSRVGGRIRTYREEGQDWYVELGAMRLPGKHRLVREFIRQFDLELNPFIQTDDNTWYFVNGIRARTGEVDRNPDILNYTLHPSERGKSASQLYREALHKAFREFQTMDCKEYLKKYDSFSTKEYLIKVGKLSRGAVQMIGDLLNEDSGFYLSFLASLWDFDIFSDEESFDEITGGFDQLPKAFHKALPDVIKFNCTVEKIITKGGKVRVFYRAPDTLVSSKATADYVLVTSSAKATRHIKFLPPLSSPKTHALRSIHYASASKIALACTEKFWEKDGIRGGHSITDRPSRFIYYPSHNFPSGVGVILASYTWNDDSQFFLPLTDEKCLDLVFQDLADIHRVSKEYLQYTCDRYVIEKWQLDKHSQGAFAAFTPYQFTDFSQALFEHEGRVHFAGEHTAQPHAWIDTSMKAAVRAASNIHDDSEARTLIENEELLEDFLEKDEL
SIO_010081: IL4I1
subclass of: SO_0000673
so part of: IL4I1
location: join(182993..183023,183761..183874,195089..195303,195952..196064,196428..196629,197010..197078,197459..197595,197790..198618)
location: region:182993-198618:1
so has part: feature:182993-183023:1:exon
so has part: feature:183761-183874:1:exon
so has part: feature:195089-195303:1:exon
so has part: feature:195952-196064:1:exon
so has part: feature:196428-196629:1:exon
so has part: feature:197010-197078:1:exon
so has part: feature:197459-197595:1:exon
so has part: feature:197790-198618:1:exon

XP_032061032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182993-183023:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:183761-183874:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195089-195303:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195952-196064:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196428-196629:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:197010-197078:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197459-197595:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:197790-198618:1:exon

TRNAL-CAA
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAL-CAA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 186307..186414
location: region:186307-186414:1
so has part: feature:186307-186414:1:exon
subclass of: SO_0000663

116500282
type: Gene
SIO_000068: ncbigene

position:186307:1
position: 186307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186414:1
position: 186414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186307-186414:1:exon

TRNAL-CAA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAL-CAA
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon CAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:186341..186343,aa:Leu,seq:caa)
SIO_010081: TRNAL-CAA
subclass of: SO_0000673
so part of: TRNAL-CAA
location: join(186307..186344,186369..186414)
location: region:186307-186414:1
so has part: feature:186307-186344:1:exon
so has part: feature:186369-186414:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186307-186344:1:exon

position:186344:1
position: 186344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:186369-186414:1:exon

position:186369:1
position: 186369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRNAE-CUC
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAE-CUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 186724..186795
location: region:186724-186795:1
so has part: feature:186724-186795:1:exon
subclass of: SO_0000663

116500293
type: Gene
SIO_000068: ncbigene

position:186724:1
position: 186724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186795:1
position: 186795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186724-186795:1:exon

TRNAE-CUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAE-CUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:186757..186759,aa:Glu,seq:ctc)
SIO_010081: TRNAE-CUC
subclass of: SO_0000673
so part of: TRNAE-CUC
location: 186724..186795
location: region:186724-186795:1
so has part: feature:186724-186795:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186724-186795:1:exon

TRNAN-GUU
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAN-GUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(200349..200422)
location: region:200349-200422:-1
so has part: feature:200349-200422:-1:exon
subclass of: SO_0000663

116500286
type: Gene
SIO_000068: ncbigene

position:200349:-1
position: 200349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200422:-1
position: 200422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200349-200422:-1:exon

TRNAN-GUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAN-GUU
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(200386..200388),aa:Asn,seq:gtt)
SIO_010081: TRNAN-GUU
subclass of: SO_0000673
so part of: TRNAN-GUU
location: complement(200349..200422)
location: region:200349-200422:-1
so has part: feature:200349-200422:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:200349-200422:-1:exon

TRNAT-UGU
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAT-UGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(201496..201568)
location: region:201496-201568:-1
so has part: feature:201496-201568:-1:exon
subclass of: SO_0000663

116500287
type: Gene
SIO_000068: ncbigene

position:201496:-1
position: 201496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201568:-1
position: 201568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201496-201568:-1:exon

TRNAT-UGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAT-UGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(201533..201535),aa:Thr,seq:tgt)
SIO_010081: TRNAT-UGU
subclass of: SO_0000673
so part of: TRNAT-UGU
location: complement(201496..201568)
location: region:201496-201568:-1
so has part: feature:201496-201568:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:201496-201568:-1:exon

TRNAL-AAG
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAL-AAG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 202192..202273
location: region:202192-202273:1
so has part: feature:202192-202273:1:exon
subclass of: SO_0000663

116500304
type: Gene
SIO_000068: ncbigene

position:202192:1
position: 202192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202273:1
position: 202273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202192-202273:1:exon

TRNAL-AAG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAL-AAG
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon AAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:202226..202228,aa:Leu,seq:aag)
SIO_010081: TRNAL-AAG
subclass of: SO_0000673
so part of: TRNAL-AAG
location: 202192..202273
location: region:202192-202273:1
so has part: feature:202192-202273:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:202192-202273:1:exon

TRNAV-AAC
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAV-AAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(202679..202751)
location: region:202679-202751:-1
so has part: feature:202679-202751:-1:exon
subclass of: SO_0000663

116500288
type: Gene
SIO_000068: ncbigene

position:202679:-1
position: 202679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202751:-1
position: 202751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202679-202751:-1:exon

TRNAV-AAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAV-AAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon AAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(202716..202718),aa:Val,seq:aac)
SIO_010081: TRNAV-AAC
subclass of: SO_0000673
so part of: TRNAV-AAC
location: complement(202679..202751)
location: region:202679-202751:-1
so has part: feature:202679-202751:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:202679-202751:-1:exon

TRNAP-UGG
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAP-UGG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(204181..204252)
location: region:204181-204252:-1
so has part: feature:204181-204252:-1:exon
subclass of: SO_0000663

116500289
type: Gene
SIO_000068: ncbigene

position:204181:-1
position: 204181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204252:-1
position: 204252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204181-204252:-1:exon

TRNAP-UGG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAP-UGG
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA proline (anticodon UGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(204218..204220),aa:Pro,seq:tgg)
SIO_010081: TRNAP-UGG
subclass of: SO_0000673
so part of: TRNAP-UGG
location: complement(204181..204252)
location: region:204181-204252:-1
so has part: feature:204181-204252:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:204181-204252:-1:exon

TRNAT-UGU
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAT-UGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(204427..204499)
location: region:204427-204499:-1
so has part: feature:204427-204499:-1:exon
subclass of: SO_0000663

116500290
type: Gene
SIO_000068: ncbigene

position:204427:-1
position: 204427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204499:-1
position: 204499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204427-204499:-1:exon

TRNAT-UGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAT-UGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(204464..204466),aa:Thr,seq:tgt)
SIO_010081: TRNAT-UGU
subclass of: SO_0000673
so part of: TRNAT-UGU
location: complement(204427..204499)
location: region:204427-204499:-1
so has part: feature:204427-204499:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:204427-204499:-1:exon

LOC116500263
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500263
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(206191..215756)
location: region:206191-215756:-1
so has part: feature:206191-215756:-1:exon
subclass of: SO_0000010

116500263
type: Gene
SIO_000068: ncbigene

position:206191:-1
position: 206191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215756:-1
position: 215756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206191-215756:-1:exon

LOC116500263
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500263
product: E3 ubiquitin-protein ligase TRIM7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205204.1
SIO_010081: LOC116500263
subclass of: SO_0000673
so part of: LOC116500263
location: complement(join(206191..207577,209736..209771,210595..210710,211365..211387,213481..213711,214440..214535,215320..215756))
location: region:206191-215756:-1
so has part: feature:215320-215756:-1:exon
so has part: feature:214440-214535:-1:exon
so has part: feature:213481-213711:-1:exon
so has part: feature:211365-211387:-1:exon
so has part: feature:210595-210710:-1:exon
so has part: feature:209736-209771:-1:exon
so has part: feature:206191-207577:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:215320-215756:-1:exon

position:215320:-1
position: 215320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:214440-214535:-1:exon

position:214440:-1
position: 214440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214535:-1
position: 214535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:213481-213711:-1:exon

position:213481:-1
position: 213481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213711:-1
position: 213711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:211365-211387:-1:exon

position:211365:-1
position: 211365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211387:-1
position: 211387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:210595-210710:-1:exon

position:210595:-1
position: 210595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210710:-1
position: 210710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:209736-209771:-1:exon

position:209736:-1
position: 209736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209771:-1
position: 209771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:206191-207577:-1:exon

position:207577:-1
position: 207577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500263
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500263
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM7-like
translation: MAAMFLPGNLQDEATCSVCLEFFKDPVSIECGHNFCRACIIKSWKDLEMDFPCPQCREVFQQKSFRPNRQLANMAEIISQFALRGAKGAEEDGLCAKHREALKLYCKDDRRTICVVCDRSREHRPHAVVPVDEASEEYKEKIQGRLDFLKKERQELLEFKVNDDKKTQELLKTIENERQKLLVEFEGLRQFLHDQEHILLGQLEKMEKSIAKRQNENISDLSKEITLLNKLITELEEKIQQPMLEFLKDVMSIISRSDDVKSHKPVPVCTDMKMHVCNFSLKTVVLEKVVKKFKENLRDELGRGEKEDLTLDPESANHLLILSADLKSVRMGCRKQELPDNPKRFDTNSRVLASTGFKSGRHYWEVEVGASDGWAFGVARESVRRKGLTQFSPEEGIWAVQQNGGRYWAVTSPQRTPLCLNQKLNKVRVYLDYEGEEVSFYNADNMQHIFTFNVAFQEKVFPLFSVCSTVTYIKLCP
SIO_010081: LOC116500263
subclass of: SO_0000673
so part of: LOC116500263
location: complement(join(207063..207577,209736..209771,210595..210710,211365..211387,213481..213711,214440..214535,215320..215736))
location: region:207063-215736:-1
so has part: feature:215320-215736:-1:exon
so has part: feature:214440-214535:-1:exon
so has part: feature:213481-213711:-1:exon
so has part: feature:211365-211387:-1:exon
so has part: feature:210595-210710:-1:exon
so has part: feature:209736-209771:-1:exon
so has part: feature:207063-207577:-1:exon

XP_032061095.1
type: Protein
SIO_000068: ncbiprotein

position:207063:-1
position: 207063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215736:-1
position: 215736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215320-215736:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214440-214535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:213481-213711:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:211365-211387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:210595-210710:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:209736-209771:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207063-207577:-1:exon

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(221912..221984)
location: region:221912-221984:-1
so has part: feature:221912-221984:-1:exon
subclass of: SO_0000663

116500291
type: Gene
SIO_000068: ncbigene

position:221912:-1
position: 221912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221984:-1
position: 221984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221912-221984:-1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(221949..221951),aa:Lys,seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: complement(221912..221984)
location: region:221912-221984:-1
so has part: feature:221912-221984:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:221912-221984:-1:exon

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(224320..224392)
location: region:224320-224392:-1
so has part: feature:224320-224392:-1:exon
subclass of: SO_0000663

116500292
type: Gene
SIO_000068: ncbigene

position:224320:-1
position: 224320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224392:-1
position: 224392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224320-224392:-1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(224357..224359),aa:Lys,seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: complement(224320..224392)
location: region:224320-224392:-1
so has part: feature:224320-224392:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:224320-224392:-1:exon

TRNAE-CUC
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAE-CUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(224712..224783)
location: region:224712-224783:-1
so has part: feature:224712-224783:-1:exon
subclass of: SO_0000663

116500294
type: Gene
SIO_000068: ncbigene

position:224712:-1
position: 224712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224783:-1
position: 224783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224712-224783:-1:exon

TRNAE-CUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAE-CUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(224748..224750),aa:Glu,seq:ctc)
SIO_010081: TRNAE-CUC
subclass of: SO_0000673
so part of: TRNAE-CUC
location: complement(224712..224783)
location: region:224712-224783:-1
so has part: feature:224712-224783:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:224712-224783:-1:exon

TRNAV-CAC
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAV-CAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(226059..226131)
location: region:226059-226131:-1
so has part: feature:226059-226131:-1:exon
subclass of: SO_0000663

116500295
type: Gene
SIO_000068: ncbigene

position:226059:-1
position: 226059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226131:-1
position: 226131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226059-226131:-1:exon

TRNAV-CAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAV-CAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(226096..226098),aa:Val,seq:cac)
SIO_010081: TRNAV-CAC
subclass of: SO_0000673
so part of: TRNAV-CAC
location: complement(226059..226131)
location: region:226059-226131:-1
so has part: feature:226059-226131:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:226059-226131:-1:exon

TRNAV-AAC
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAV-AAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(226533..226605)
location: region:226533-226605:-1
so has part: feature:226533-226605:-1:exon
subclass of: SO_0000663

116500296
type: Gene
SIO_000068: ncbigene

position:226533:-1
position: 226533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226605:-1
position: 226605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226533-226605:-1:exon

TRNAV-AAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAV-AAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon AAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(226570..226572),aa:Val,seq:aac)
SIO_010081: TRNAV-AAC
subclass of: SO_0000673
so part of: TRNAV-AAC
location: complement(226533..226605)
location: region:226533-226605:-1
so has part: feature:226533-226605:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:226533-226605:-1:exon

TRNAV-CAC
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAV-CAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(227012..227084)
location: region:227012-227084:-1
so has part: feature:227012-227084:-1:exon
subclass of: SO_0000663

116500297
type: Gene
SIO_000068: ncbigene

position:227012:-1
position: 227012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227084:-1
position: 227084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227012-227084:-1:exon

TRNAV-CAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAV-CAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(227049..227051),aa:Val,seq:cac)
SIO_010081: TRNAV-CAC
subclass of: SO_0000673
so part of: TRNAV-CAC
location: complement(227012..227084)
location: region:227012-227084:-1
so has part: feature:227012-227084:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:227012-227084:-1:exon

TRNAV-AAC
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAV-AAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(227477..227549)
location: region:227477-227549:-1
so has part: feature:227477-227549:-1:exon
subclass of: SO_0000663

116500298
type: Gene
SIO_000068: ncbigene

position:227477:-1
position: 227477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227549:-1
position: 227549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227477-227549:-1:exon

TRNAV-AAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAV-AAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon AAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(227514..227516),aa:Val,seq:aac)
SIO_010081: TRNAV-AAC
subclass of: SO_0000673
so part of: TRNAV-AAC
location: complement(227477..227549)
location: region:227477-227549:-1
so has part: feature:227477-227549:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:227477-227549:-1:exon

TRNAE-UUC
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAE-UUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(227909..227980)
location: region:227909-227980:-1
so has part: feature:227909-227980:-1:exon
subclass of: SO_0000663

116500299
type: Gene
SIO_000068: ncbigene

position:227909:-1
position: 227909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227980:-1
position: 227980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227909-227980:-1:exon

TRNAE-UUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAE-UUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon UUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(227945..227947),aa:Glu,seq:ttc)
SIO_010081: TRNAE-UUC
subclass of: SO_0000673
so part of: TRNAE-UUC
location: complement(227909..227980)
location: region:227909-227980:-1
so has part: feature:227909-227980:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:227909-227980:-1:exon

TRNAE-UUC
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAE-UUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 228540..228611
location: region:228540-228611:1
so has part: feature:228540-228611:1:exon
subclass of: SO_0000663

116500306
type: Gene
SIO_000068: ncbigene

position:228540:1
position: 228540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228611:1
position: 228611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228540-228611:1:exon

TRNAE-UUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAE-UUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon UUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:228573..228575,aa:Glu,seq:ttc)
SIO_010081: TRNAE-UUC
subclass of: SO_0000673
so part of: TRNAE-UUC
location: 228540..228611
location: region:228540-228611:1
so has part: feature:228540-228611:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:228540-228611:1:exon

TRNAV-CAC
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAV-CAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(228834..228906)
location: region:228834-228906:-1
so has part: feature:228834-228906:-1:exon
subclass of: SO_0000663

116500300
type: Gene
SIO_000068: ncbigene

position:228834:-1
position: 228834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228906:-1
position: 228906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228834-228906:-1:exon

TRNAV-CAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAV-CAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(228871..228873),aa:Val,seq:cac)
SIO_010081: TRNAV-CAC
subclass of: SO_0000673
so part of: TRNAV-CAC
location: complement(228834..228906)
location: region:228834-228906:-1
so has part: feature:228834-228906:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:228834-228906:-1:exon

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 229289..229361
location: region:229289-229361:1
so has part: feature:229289-229361:1:exon
subclass of: SO_0000663

116500307
type: Gene
SIO_000068: ncbigene

position:229289:1
position: 229289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229361:1
position: 229361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229289-229361:1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:229322..229324,aa:Lys,seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: 229289..229361
location: region:229289-229361:1
so has part: feature:229289-229361:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:229289-229361:1:exon

TRNAL-CAA
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAL-CAA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 229554..229661
location: region:229554-229661:1
so has part: feature:229554-229661:1:exon
subclass of: SO_0000663

116500283
type: Gene
SIO_000068: ncbigene

position:229554:1
position: 229554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229661:1
position: 229661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229554-229661:1:exon

TRNAL-CAA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAL-CAA
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon CAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:229588..229590,aa:Leu,seq:caa)
SIO_010081: TRNAL-CAA
subclass of: SO_0000673
so part of: TRNAL-CAA
location: join(229554..229591,229616..229661)
location: region:229554-229661:1
so has part: feature:229554-229591:1:exon
so has part: feature:229616-229661:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:229554-229591:1:exon

position:229591:1
position: 229591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:229616-229661:1:exon

position:229616:1
position: 229616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRNAV-CAC
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAV-CAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 230234..230306
location: region:230234-230306:1
so has part: feature:230234-230306:1:exon
subclass of: SO_0000663

116500284
type: Gene
SIO_000068: ncbigene

position:230234:1
position: 230234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230306:1
position: 230306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230234-230306:1:exon

TRNAV-CAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAV-CAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:230267..230269,aa:Val,seq:cac)
SIO_010081: TRNAV-CAC
subclass of: SO_0000673
so part of: TRNAV-CAC
location: 230234..230306
location: region:230234-230306:1
so has part: feature:230234-230306:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:230234-230306:1:exon

TRNAE-CUC
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAE-CUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(230756..230827)
location: region:230756-230827:-1
so has part: feature:230756-230827:-1:exon
subclass of: SO_0000663

116500301
type: Gene
SIO_000068: ncbigene

position:230756:-1
position: 230756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230827:-1
position: 230827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230756-230827:-1:exon

TRNAE-CUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAE-CUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(230792..230794),aa:Glu,seq:ctc)
SIO_010081: TRNAE-CUC
subclass of: SO_0000673
so part of: TRNAE-CUC
location: complement(230756..230827)
location: region:230756-230827:-1
so has part: feature:230756-230827:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:230756-230827:-1:exon

LOC116500258
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500258
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(232372..237293)
location: region:232372-237293:-1
so has part: feature:232372-237293:-1:exon
subclass of: SO_0000010

116500258
type: Gene
SIO_000068: ncbigene

position:232372:-1
position: 232372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237293:-1
position: 237293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232372-237293:-1:exon

LOC116500258
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500258
product: E3 ubiquitin-protein ligase TRIM39-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205196.1
SIO_010081: LOC116500258
subclass of: SO_0000673
so part of: LOC116500258
location: complement(join(232372..232886,233578..233693,234312..234334,235020..235250,235806..235901,236874..237293))
location: region:232372-237293:-1
so has part: feature:236874-237293:-1:exon
so has part: feature:235806-235901:-1:exon
so has part: feature:235020-235250:-1:exon
so has part: feature:234312-234334:-1:exon
so has part: feature:233578-233693:-1:exon
so has part: feature:232372-232886:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:236874-237293:-1:exon

position:236874:-1
position: 236874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:235806-235901:-1:exon

position:235806:-1
position: 235806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235901:-1
position: 235901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:235020-235250:-1:exon

position:235020:-1
position: 235020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235250:-1
position: 235250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:234312-234334:-1:exon

position:234312:-1
position: 234312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234334:-1
position: 234334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:233578-233693:-1:exon

position:233578:-1
position: 233578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233693:-1
position: 233693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:232372-232886:-1:exon

position:232886:-1
position: 232886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500258
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500258
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like
translation: MAEDIPTESFQDEASCSICLGFFQDPVSIHCGHNFCRACITRCWEEEEANFTCPRCKETAPERNLRPNRELAKIIEIAKRLSLQAAKGGAGGERLCEKHQEALKLFCEEDQTPICLVCRESQAHRAHPVVPIEEAAEEHKEKFQAHVQILKDRREKLLGLKMAEEGRSLNFLERVEEERQKVVAEIKELHQFVERQEQLLLGQLAKLDQEIVRRQEENIAKLLGEISSVGEHIRELEEKCQQPAYELLQDSRNILSRLEKESAQKPLEASPELAETPTSLPQKNIALKEMLMKFQVSLTLDPETAHPRLVLSEDRKRVRWEDTRQPVPDNPKRFDSSRCVLGCEGFSTGRHYWEVEVGDGEAWAVGVAKESVRRKGRISVNPEVGIWAVGQCGSQYQALTSPTSPISLLAAPRVIGIYLDYEAGRVAFFDSHNQAPIFTYPPTSFAGEQILPLLCLGRGCQFTLSP
SIO_010081: LOC116500258
subclass of: SO_0000673
so part of: LOC116500258
location: complement(join(232372..232886,233578..233693,234312..234334,235020..235250,235806..235901,236874..237293))
location: region:232372-237293:-1
so has part: feature:236874-237293:-1:exon
so has part: feature:235806-235901:-1:exon
so has part: feature:235020-235250:-1:exon
so has part: feature:234312-234334:-1:exon
so has part: feature:233578-233693:-1:exon
so has part: feature:232372-232886:-1:exon

XP_032061087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:236874-237293:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:235806-235901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235020-235250:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:234312-234334:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:233578-233693:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:232372-232886:-1:exon

LOC116500257
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500257
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 240990..245380
location: region:240990-245380:1
so has part: feature:240990-245380:1:exon
subclass of: SO_0000010

116500257
type: Gene
SIO_000068: ncbigene

position:240990:1
position: 240990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245380:1
position: 245380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240990-245380:1:exon

LOC116500257
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500257
product: zinc finger protein RFP-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 39% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205195.1
SIO_010081: LOC116500257
subclass of: SO_0000673
so part of: LOC116500257
location: join(240990..241409,242176..242271,242702..242932,243098..243120,243380..243495,244317..244346,244866..245380)
location: region:240990-245380:1
so has part: feature:240990-241409:1:exon
so has part: feature:242176-242271:1:exon
so has part: feature:242702-242932:1:exon
so has part: feature:243098-243120:1:exon
so has part: feature:243380-243495:1:exon
so has part: feature:244317-244346:1:exon
so has part: feature:244866-245380:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:240990-241409:1:exon

position:241409:1
position: 241409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:242176-242271:1:exon

position:242176:1
position: 242176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242271:1
position: 242271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:242702-242932:1:exon

position:242702:1
position: 242702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242932:1
position: 242932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:243098-243120:1:exon

position:243098:1
position: 243098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243120:1
position: 243120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:243380-243495:1:exon

position:243380:1
position: 243380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243495:1
position: 243495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:244317-244346:1:exon

position:244317:1
position: 244317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244346:1
position: 244346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:244866-245380:1:exon

position:244866:1
position: 244866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500257
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500257
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein RFP-like
translation: MAAPSPVPKLPSEASCPICLEYFRDPVSIHCGHNFCRACITRCWEWSTANFSCPQCKETAPERSFRPSRELARVLEIAKRLSLQAARGDVVEEEGCERHREPLNVFCKDDETFICVICRESRLHRAHTMLPVQEAVQEYKGQIQAHLQTLKEDRDRLLGFREAEMRRNWEYLEKTEAERQKVLSTFEGLRLFLEDQARHLLAQLAELERAVEKMQEENITNLTKEISHLDTLIQEMEEKCQEPASKFLQDIRGTLSRFGNENFQQPTLLLPELENKISHFREKNIALEETLRNFKDILMFELPEKMNVTLDPATAHPQLAVSEDRRSVRWEDAQQDASDEGFGPDPSVLGCEGITSGRCCWEVEVTPKGSWAVGVARESLKRREETTVSPEIELWSMGLCEGQFWALTSFERTPLSQIQVPRRVRITLDYERGQVAFFDVDRKALIFIFSAASFKGESVHPWFLVWSEGSRITLCP
SIO_010081: LOC116500257
subclass of: SO_0000673
so part of: LOC116500257
location: join(240990..241409,242176..242271,242702..242932,243098..243120,243380..243495,244317..244346,244866..245380)
location: region:240990-245380:1
so has part: feature:240990-241409:1:exon
so has part: feature:242176-242271:1:exon
so has part: feature:242702-242932:1:exon
so has part: feature:243098-243120:1:exon
so has part: feature:243380-243495:1:exon
so has part: feature:244317-244346:1:exon
so has part: feature:244866-245380:1:exon

XP_032061086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:240990-241409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242176-242271:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242702-242932:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:243098-243120:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:243380-243495:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244317-244346:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:244866-245380:1:exon

LOC116500229
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500229
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(247117..253821)
location: region:247117-253821:-1
so has part: feature:247117-253821:-1:exon
subclass of: SO_0000010

116500229
type: Gene
SIO_000068: ncbigene

position:247117:-1
position: 247117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253821:-1
position: 253821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247117-253821:-1:exon

LOC116500229
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500229
product: E3 ubiquitin-protein ligase TRIM39-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_032205143.1
SIO_010081: LOC116500229
subclass of: SO_0000673
so part of: LOC116500229
location: complement(join(247117..247637,249125..249240,249739..249761,250234..250353,251457..251538,253753..253821))
location: region:247117-253821:-1
so has part: feature:253753-253821:-1:exon
so has part: feature:251457-251538:-1:exon
so has part: feature:250234-250353:-1:exon
so has part: feature:249739-249761:-1:exon
so has part: feature:249125-249240:-1:exon
so has part: feature:247117-247637:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:253753-253821:-1:exon

position:253753:-1
position: 253753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:251457-251538:-1:exon

position:251457:-1
position: 251457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251538:-1
position: 251538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:250234-250353:-1:exon

position:250234:-1
position: 250234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250353:-1
position: 250353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:249739-249761:-1:exon

position:249739:-1
position: 249739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249761:-1
position: 249761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:249125-249240:-1:exon

position:249125:-1
position: 249125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249240:-1
position: 249240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:247117-247637:-1:exon

position:247637:-1
position: 247637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500229
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500229
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM39-like
translation: MGTPSDSSEEEGSTIMRDEGNKGYLATELNTKPVGRGCLEIFPCELRARVLEDLKNEIEKRQAKATTKLSEEISQLDSLTKTQDKKSQQSDAKSLVTRCGKVTFQLPVNVSPEPEERFCHFSWRNSALKETLKKLQASITLDPDTAHPDLILSEDRKSVRRGEGRQDLPNNPERFDYWPFVLGYQSFATGRHCWEVEVGDEGDWAIGVAKESISRKGQLSLCPKGGIWGVEKWGGQVRALTTRKVTLLPLRVLPRRVSIHLDYAGGTVAFFDADEGGLIFIFSRASFTGERVRPWLWVVGARSQLRLCP
SIO_010081: LOC116500229
subclass of: SO_0000673
so part of: LOC116500229
location: complement(join(247117..247637,249125..249240,249739..249761,250234..250353,251457..251538,253753..253821))
location: region:247117-253821:-1
so has part: feature:253753-253821:-1:exon
so has part: feature:251457-251538:-1:exon
so has part: feature:250234-250353:-1:exon
so has part: feature:249739-249761:-1:exon
so has part: feature:249125-249240:-1:exon
so has part: feature:247117-247637:-1:exon

XP_032061034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:253753-253821:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:251457-251538:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:250234-250353:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249739-249761:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249125-249240:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247117-247637:-1:exon

LOC116500254
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500254
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(253982..258615)
location: region:253982-258615:-1
so has part: feature:253982-258615:-1:exon
subclass of: SO_0000010

116500254
type: Gene
SIO_000068: ncbigene

position:253982:-1
position: 253982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258615:-1
position: 258615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253982-258615:-1:exon

LOC116500254
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500254
product: zinc finger protein RFP-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 40% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205188.1
SIO_010081: LOC116500254
subclass of: SO_0000673
so part of: LOC116500254
location: complement(join(253982..254577,254923..254952,255647..255762,255899..255921,256159..256389,257185..257277,258196..258615))
location: region:253982-258615:-1
so has part: feature:258196-258615:-1:exon
so has part: feature:257185-257277:-1:exon
so has part: feature:256159-256389:-1:exon
so has part: feature:255899-255921:-1:exon
so has part: feature:255647-255762:-1:exon
so has part: feature:254923-254952:-1:exon
so has part: feature:253982-254577:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:258196-258615:-1:exon

position:258196:-1
position: 258196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:257185-257277:-1:exon

position:257185:-1
position: 257185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257277:-1
position: 257277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:256159-256389:-1:exon

position:256159:-1
position: 256159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256389:-1
position: 256389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:255899-255921:-1:exon

position:255899:-1
position: 255899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255921:-1
position: 255921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:255647-255762:-1:exon

position:255647:-1
position: 255647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255762:-1
position: 255762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:254923-254952:-1:exon

position:254923:-1
position: 254923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254952:-1
position: 254952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:253982-254577:-1:exon

position:254577:-1
position: 254577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500254
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500254
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein RFP-like
translation: MASQSPSESLQGEASCSICLGYFQEPVSIPCGHNFCRECITRCWEGLEANFSCPQCRQTASHKSFRPSRELAKIAEIAQQLSLQAGRGAAGHEGWCQQHQEALKLFCKEDQQPICMVCDRSQAHRLHTVLPAEEAAQEYKEEIQARLQLLKEEREKYLESRKSRARKNLHLEKTKNEGKKIVCEFEQLHQFLKDQERLLLTQLADLDRAISRVQEEAVVKVSEEMAHLDTLIWEMEGKFQQPASKFLLDIRRLLKSCEVMKFNPPVEISPHLERRLEDFLQKNVLVRCTLRKCQDSLMFKLQEPTNVTLDPATAHPNLHLSEDRKQVRGQLVPQDLPDNPERFDFEPCVLGCQGFTSGRHFWEVEVGQGGVWAIGVARETAKRKGAMSLTPKEGIWALEAYHSLTSPRANVRLNQLPRKIRVSLDYEGGRVAFFSSDDDAPILVYSRAAFNGERVLPWFKMGMGARLQEITQNSSSEEQSMTGQLMSPLDWVGFRSPLRICP
SIO_010081: LOC116500254
subclass of: SO_0000673
so part of: LOC116500254
location: complement(join(253982..254577,254923..254952,255647..255762,255899..255921,256159..256389,257185..257277,258196..258615))
location: region:253982-258615:-1
so has part: feature:258196-258615:-1:exon
so has part: feature:257185-257277:-1:exon
so has part: feature:256159-256389:-1:exon
so has part: feature:255899-255921:-1:exon
so has part: feature:255647-255762:-1:exon
so has part: feature:254923-254952:-1:exon
so has part: feature:253982-254577:-1:exon

XP_032061079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:258196-258615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:257185-257277:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:256159-256389:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:255899-255921:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:255647-255762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:254923-254952:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:253982-254577:-1:exon

LOC116500256
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(260466..267344)
location: region:260466-267344:-1
so has part: feature:260466-267344:-1:exon
subclass of: SO_0000010

116500256
type: Gene
SIO_000068: ncbigene

position:260466:-1
position: 260466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267344:-1
position: 267344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260466-267344:-1:exon

LOC116500256
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500256
product: zinc finger protein RFP-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205193.1
SIO_010081: LOC116500256
subclass of: SO_0000673
so part of: LOC116500256
location: complement(join(260466..262072,262415..262447,263348..263463,263564..263586,264190..264420,265179..265274,266836..267344))
location: region:260466-267344:-1
so has part: feature:266836-267344:-1:exon
so has part: feature:265179-265274:-1:exon
so has part: feature:264190-264420:-1:exon
so has part: feature:263564-263586:-1:exon
so has part: feature:263348-263463:-1:exon
so has part: feature:262415-262447:-1:exon
so has part: feature:260466-262072:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:266836-267344:-1:exon

position:266836:-1
position: 266836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:265179-265274:-1:exon

position:265179:-1
position: 265179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265274:-1
position: 265274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:264190-264420:-1:exon

position:264190:-1
position: 264190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264420:-1
position: 264420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:263564-263586:-1:exon

position:263564:-1
position: 263564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263586:-1
position: 263586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:263348-263463:-1:exon

position:263348:-1
position: 263348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263463:-1
position: 263463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:262415-262447:-1:exon

position:262415:-1
position: 262415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262447:-1
position: 262447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:260466-262072:-1:exon

position:262072:-1
position: 262072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500256
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein RFP-like
translation: MAECDPLESLQKEASCSICLDYFSDPVSINCGHSFCRDCITRCSGKSDRRFACPQCRGIAQKRKFRPNRELRNLAEIAKKLISRVGDAARAGGVCPKHQEPLKLFCQEDQTAICVVCDRSQAHRAHTVAPIEEAAQECKEHIQSKLKSLKDERERLQGLKAMGEKRSQKHLQQARAERWKIMSVFKQLHQFQDEQERLLLMWLEDTEKEIVQTQSENDRRISAEISHLGNLIRELEGMNPQPENKSLQDARSALTRCDTRAFQHLTEKFPRVEKSLKDLSQKNIILKEALRKFKESLPVELDVQWANVTLDPDTANPHLVLSEDRRSVRWDETPQNLPDNPQRFDTYCSVLGHEGFTAGRHYWEVQLGNRGFWAVGVARDSAWRKGWISLDPSQGIWAVGICGDRFQAFTSFETVQPLNGRPRTIRVSLDYDKGHVAFFDADNETLAFAFTPTSFNGEKILPFFWVWESKIQLAP
SIO_010081: LOC116500256
subclass of: SO_0000673
so part of: LOC116500256
location: complement(join(261561..262072,262415..262447,263348..263463,263564..263586,264190..264420,265179..265274,266836..267252))
location: region:261561-267252:-1
so has part: feature:266836-267252:-1:exon
so has part: feature:265179-265274:-1:exon
so has part: feature:264190-264420:-1:exon
so has part: feature:263564-263586:-1:exon
so has part: feature:263348-263463:-1:exon
so has part: feature:262415-262447:-1:exon
so has part: feature:261561-262072:-1:exon

XP_032061084.1
type: Protein
SIO_000068: ncbiprotein

position:261561:-1
position: 261561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267252:-1
position: 267252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266836-267252:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:265179-265274:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:264190-264420:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:263564-263586:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:263348-263463:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:262415-262447:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:261561-262072:-1:exon

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(269687..269759)
location: region:269687-269759:-1
so has part: feature:269687-269759:-1:exon
subclass of: SO_0000663

116500302
type: Gene
SIO_000068: ncbigene

position:269687:-1
position: 269687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269759:-1
position: 269759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269687-269759:-1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(269724..269726),aa:Lys,seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: complement(269687..269759)
location: region:269687-269759:-1
so has part: feature:269687-269759:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:269687-269759:-1:exon

TRNAV-CAC
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAV-CAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(270026..270098)
location: region:270026-270098:-1
so has part: feature:270026-270098:-1:exon
subclass of: SO_0000663

116500303
type: Gene
SIO_000068: ncbigene

position:270026:-1
position: 270026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270098:-1
position: 270098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270026-270098:-1:exon

TRNAV-CAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAV-CAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(270063..270065),aa:Val,seq:cac)
SIO_010081: TRNAV-CAC
subclass of: SO_0000673
so part of: TRNAV-CAC
location: complement(270026..270098)
location: region:270026-270098:-1
so has part: feature:270026-270098:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:270026-270098:-1:exon

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(270276..270348)
location: region:270276-270348:-1
so has part: feature:270276-270348:-1:exon
subclass of: SO_0000663

116500305
type: Gene
SIO_000068: ncbigene

position:270276:-1
position: 270276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270348:-1
position: 270348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270276-270348:-1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(270313..270315),aa:Lys,seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: complement(270276..270348)
location: region:270276-270348:-1
so has part: feature:270276-270348:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:270276-270348:-1:exon

TRIM41
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRIM41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 271096..277204
location: region:271096-277204:1
so has part: feature:271096-277204:1:exon
subclass of: SO_0000010

116500248
type: Gene
SIO_000068: ncbigene

position:271096:1
position: 271096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277204:1
position: 277204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271096-277204:1:exon

TRIM41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: TRIM41
product: tripartite motif containing 41
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205177.1
SIO_010081: TRIM41
subclass of: SO_0000673
so part of: TRIM41
location: join(271096..272034,272914..273009,273535..273765,274356..274378,275022..275149,275550..277204)
location: region:271096-277204:1
so has part: feature:271096-272034:1:exon
so has part: feature:272914-273009:1:exon
so has part: feature:273535-273765:1:exon
so has part: feature:274356-274378:1:exon
so has part: feature:275022-275149:1:exon
so has part: feature:275550-277204:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:271096-272034:1:exon

position:272034:1
position: 272034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:272914-273009:1:exon

position:272914:1
position: 272914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273009:1
position: 273009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:273535-273765:1:exon

position:273535:1
position: 273535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273765:1
position: 273765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:274356-274378:1:exon

position:274356:1
position: 274356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274378:1
position: 274378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:275022-275149:1:exon

position:275022:1
position: 275022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275149:1
position: 275149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:275550-277204:1:exon

position:275550:1
position: 275550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRIM41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: TRIM41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM41
translation: MAVVGDGGTGGRLNPVETLQEEAICAICLDYFVEPVSIGCGHNFCRVCISQLWGGEAEYEAAPGAAAAAAGGGGGAVGLGDVLEEELEDEEDELDEDELEVEQEEEEEEEEEEGGGGAEEEEDMWSEEEDDGELWEEPVEEDIWDGGVGGELYFGDEDYDEDVMEEDVEEEEEVEEEEEEVQTPPPPVLAARPRRLQTFTCPQCRKTFFQRNFRPNLQLANMVQIIRQLHPHPQRLAPPAAGPSASGAAAGGPGGVLVARGGQGPPNLCEKHQEPLKLFCEVDEQAICVVCRESRSHKHHSVVPLEEVVQDYKNKLQSHLEPLKKKLDAVLKQKSNEEEKITELRDKMKLEIKEFESDFELLHQFLIGEQVLLLHQLEERYESLLVRQSSNISQLEEQSAALSRLIAEAEDKSKQDGLQLLKDIKGTFIRCENIKFQEPEMVPVDVGKKYRNYFLQDVVMRKMEKVFSKVPQADITLDPDTAHPRLSLSLDRRSVKLGERCKDLPDNPKRFDSDYCVLGSQGFTAGRHYWEVEVGGRRGWAVGAARETARRKEKTVGPHQKREIWCVGTNGKKYQALTATEQTALSPSERPRRFGVYLDYERGQICFYNAESMTHIHTFNASFHERIFPFFRVLAKGTRIKICA
SIO_010081: TRIM41
subclass of: SO_0000673
so part of: TRIM41
location: join(271096..272034,272914..273009,273535..273765,274356..274378,275022..275149,275550..276067)
location: region:271096-276067:1
so has part: feature:271096-272034:1:exon
so has part: feature:272914-273009:1:exon
so has part: feature:273535-273765:1:exon
so has part: feature:274356-274378:1:exon
so has part: feature:275022-275149:1:exon
so has part: feature:275550-276067:1:exon

XP_032061068.1
type: Protein
SIO_000068: ncbiprotein

position:276067:1
position: 276067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271096-272034:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:272914-273009:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:273535-273765:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274356-274378:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:275022-275149:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:275550-276067:1:exon

RACK1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: RACK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(277933..282292)
location: region:277933-282292:-1
so has part: feature:277933-282292:-1:exon
subclass of: SO_0000010

116500264
type: Gene
SIO_000068: ncbigene

position:277933:-1
position: 277933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282292:-1
position: 282292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277933-282292:-1:exon

RACK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: RACK1
product: receptor for activated C kinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205205.1
SIO_010081: RACK1
subclass of: SO_0000673
so part of: RACK1
location: complement(join(277933..278072,278400..278510,278906..279046,279617..279727,279892..279987,280296..280443,281081..281252,282079..282292))
location: region:277933-282292:-1
so has part: feature:282079-282292:-1:exon
so has part: feature:281081-281252:-1:exon
so has part: feature:280296-280443:-1:exon
so has part: feature:279892-279987:-1:exon
so has part: feature:279617-279727:-1:exon
so has part: feature:278906-279046:-1:exon
so has part: feature:278400-278510:-1:exon
so has part: feature:277933-278072:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:282079-282292:-1:exon

position:282079:-1
position: 282079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:281081-281252:-1:exon

position:281081:-1
position: 281081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281252:-1
position: 281252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:280296-280443:-1:exon

position:280296:-1
position: 280296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280443:-1
position: 280443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:279892-279987:-1:exon

position:279892:-1
position: 279892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279987:-1
position: 279987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:279617-279727:-1:exon

position:279617:-1
position: 279617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279727:-1
position: 279727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:278906-279046:-1:exon

position:278906:-1
position: 278906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279046:-1
position: 279046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:278400-278510:-1:exon

position:278400:-1
position: 278400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278510:-1
position: 278510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:277933-278072:-1:exon

position:278072:-1
position: 278072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RACK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: RACK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor of activated protein C kinase 1
translation: MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR
SIO_010081: RACK1
subclass of: SO_0000673
so part of: RACK1
location: complement(join(278007..278072,278400..278510,278906..279046,279617..279727,279892..279987,280296..280443,281081..281252,282079..282187))
location: region:278007-282187:-1
so has part: feature:282079-282187:-1:exon
so has part: feature:281081-281252:-1:exon
so has part: feature:280296-280443:-1:exon
so has part: feature:279892-279987:-1:exon
so has part: feature:279617-279727:-1:exon
so has part: feature:278906-279046:-1:exon
so has part: feature:278400-278510:-1:exon
so has part: feature:278007-278072:-1:exon

XP_032061096.1
type: Protein
SIO_000068: ncbiprotein

position:278007:-1
position: 278007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282187:-1
position: 282187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282079-282187:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:281081-281252:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:280296-280443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279892-279987:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279617-279727:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:278906-279046:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:278400-278510:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:278007-278072:-1:exon

LOC116500277
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500277
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 289320..292103
location: region:289320-292103:1
so has part: feature:289320-292103:1:exon
subclass of: SO_0000011

116500277
type: Gene
SIO_000068: ncbigene

position:289320:1
position: 289320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292103:1
position: 292103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289320-292103:1:exon

LOC116500277
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116500277
product: uncharacterized LOC116500277
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004254274.1
SIO_010081: LOC116500277
subclass of: SO_0000673
so part of: LOC116500277
location: join(289320..289385,289631..289651,289961..289981,290067..290087,290204..290224,290531..290551,291012..291017,291259..291279,291810..291830,292079..292103)
location: region:289320-292103:1
so has part: feature:289320-289385:1:exon
so has part: feature:289631-289651:1:exon
so has part: feature:289961-289981:1:exon
so has part: feature:290067-290087:1:exon
so has part: feature:290204-290224:1:exon
so has part: feature:290531-290551:1:exon
so has part: feature:291012-291017:1:exon
so has part: feature:291259-291279:1:exon
so has part: feature:291810-291830:1:exon
so has part: feature:292079-292103:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:289320-289385:1:exon

position:289385:1
position: 289385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:289631-289651:1:exon

position:289631:1
position: 289631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289651:1
position: 289651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:289961-289981:1:exon

position:289961:1
position: 289961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289981:1
position: 289981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:290067-290087:1:exon

position:290067:1
position: 290067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290087:1
position: 290087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:290204-290224:1:exon

position:290204:1
position: 290204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290224:1
position: 290224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:290531-290551:1:exon

position:290531:1
position: 290531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290551:1
position: 290551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:291012-291017:1:exon

position:291012:1
position: 291012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291017:1
position: 291017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:291259-291279:1:exon

position:291259:1
position: 291259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291279:1
position: 291279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:291810-291830:1:exon

position:291810:1
position: 291810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291830:1
position: 291830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:292079-292103:1:exon

position:292079:1
position: 292079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500230
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500230
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 292650..304651
location: region:292650-304651:1
so has part: feature:292650-304651:1:exon
subclass of: SO_0000010

116500230
type: Gene
SIO_000068: ncbigene

position:292650:1
position: 292650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304651:1
position: 304651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292650-304651:1:exon

LOC116500230
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500230
product: tripartite motif-containing protein 10-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 49% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205144.1
SIO_010081: LOC116500230
subclass of: SO_0000673
so part of: LOC116500230
location: join(292650..292653,293257..293277,293984..294004,294358..294378,294592..294612,294929..294949,295245..295265,295574..295594,295687..295707,296189..296209,296496..296516,297035..297055,297462..297482,297757..297777,298027..298047,298304..298324,298597..298620,299152..299172,301803..301823,302292..302312,302475..302495,302613..302633,302936..302956,303664..303684,303782..303802,304140..304651)
location: region:292650-304651:1
so has part: feature:292650-292653:1:exon
so has part: feature:293257-293277:1:exon
so has part: feature:293984-294004:1:exon
so has part: feature:294358-294378:1:exon
so has part: feature:294592-294612:1:exon
so has part: feature:294929-294949:1:exon
so has part: feature:295245-295265:1:exon
so has part: feature:295574-295594:1:exon
so has part: feature:295687-295707:1:exon
so has part: feature:296189-296209:1:exon
so has part: feature:296496-296516:1:exon
so has part: feature:297035-297055:1:exon
so has part: feature:297462-297482:1:exon
so has part: feature:297757-297777:1:exon
so has part: feature:298027-298047:1:exon
so has part: feature:298304-298324:1:exon
so has part: feature:298597-298620:1:exon
so has part: feature:299152-299172:1:exon
so has part: feature:301803-301823:1:exon
so has part: feature:302292-302312:1:exon
so has part: feature:302475-302495:1:exon
so has part: feature:302613-302633:1:exon
so has part: feature:302936-302956:1:exon
so has part: feature:303664-303684:1:exon
so has part: feature:303782-303802:1:exon
so has part: feature:304140-304651:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:292650-292653:1:exon

position:292653:1
position: 292653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:293257-293277:1:exon

position:293257:1
position: 293257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293277:1
position: 293277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:293984-294004:1:exon

position:293984:1
position: 293984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294004:1
position: 294004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:294358-294378:1:exon

position:294358:1
position: 294358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294378:1
position: 294378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:294592-294612:1:exon

position:294592:1
position: 294592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294612:1
position: 294612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:294929-294949:1:exon

position:294929:1
position: 294929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294949:1
position: 294949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:295245-295265:1:exon

position:295245:1
position: 295245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295265:1
position: 295265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:295574-295594:1:exon

position:295574:1
position: 295574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295594:1
position: 295594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:295687-295707:1:exon

position:295687:1
position: 295687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295707:1
position: 295707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:296189-296209:1:exon

position:296189:1
position: 296189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296209:1
position: 296209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:296496-296516:1:exon

position:296496:1
position: 296496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296516:1
position: 296516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:297035-297055:1:exon

position:297035:1
position: 297035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297055:1
position: 297055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:297462-297482:1:exon

position:297462:1
position: 297462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297482:1
position: 297482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:297757-297777:1:exon

position:297757:1
position: 297757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297777:1
position: 297777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:298027-298047:1:exon

position:298027:1
position: 298027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298047:1
position: 298047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:298304-298324:1:exon

position:298304:1
position: 298304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298324:1
position: 298324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:298597-298620:1:exon

position:298597:1
position: 298597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298620:1
position: 298620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:299152-299172:1:exon

position:299152:1
position: 299152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299172:1
position: 299172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:301803-301823:1:exon

position:301803:1
position: 301803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301823:1
position: 301823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:302292-302312:1:exon

position:302292:1
position: 302292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302312:1
position: 302312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:302475-302495:1:exon

position:302475:1
position: 302475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302495:1
position: 302495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:302613-302633:1:exon

position:302613:1
position: 302613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302633:1
position: 302633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:302936-302956:1:exon

position:302936:1
position: 302936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302956:1
position: 302956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:303664-303684:1:exon

position:303664:1
position: 303664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303684:1
position: 303684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:303782-303802:1:exon

position:303782:1
position: 303782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303802:1
position: 303802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:304140-304651:1:exon

position:304140:1
position: 304140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500230
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 10-like
translation: MEERDRKIRDRDKKLRKLTAELAKCDATIRLFTVELGERHTKIGELTAEVGDYDRKLRKHAAELAERDEKIREHEAEIRRLTELLEDRDLEARNQDALIRKLTEELEELKGLEAEESDLERGERDAKIDELSAEMEKRDRKIDELTAELEEYKAKMRKCMEEHRKEEEKLANVTLDPETAHPRLILSKDQKSVRWEYMLQESPDSPERFDADPCVLGCEAFTSGRHYWVVDLAEGQYCAVGVSRESLPRKGPVSFNPEEGIWAVQQWGFKNRALTSPPTLLNLPRVPKKIRISLDYEWGEVAFFDVENKVPIFTFPPASFAGERIRPWFWVELGSLSLVR
SIO_010081: LOC116500230
subclass of: SO_0000673
so part of: LOC116500230
location: join(292650..292653,293257..293277,293984..294004,294358..294378,294592..294612,294929..294949,295245..295265,295574..295594,295687..295707,296189..296209,296496..296516,297035..297055,297462..297482,297757..297777,298027..298047,298304..298324,298597..298620,299152..299172,301803..301823,302292..302312,302475..302495,302613..302633,302936..302956,303664..303684,303782..303802,304140..304651)
location: region:292650-304651:1
so has part: feature:292650-292653:1:exon
so has part: feature:293257-293277:1:exon
so has part: feature:293984-294004:1:exon
so has part: feature:294358-294378:1:exon
so has part: feature:294592-294612:1:exon
so has part: feature:294929-294949:1:exon
so has part: feature:295245-295265:1:exon
so has part: feature:295574-295594:1:exon
so has part: feature:295687-295707:1:exon
so has part: feature:296189-296209:1:exon
so has part: feature:296496-296516:1:exon
so has part: feature:297035-297055:1:exon
so has part: feature:297462-297482:1:exon
so has part: feature:297757-297777:1:exon
so has part: feature:298027-298047:1:exon
so has part: feature:298304-298324:1:exon
so has part: feature:298597-298620:1:exon
so has part: feature:299152-299172:1:exon
so has part: feature:301803-301823:1:exon
so has part: feature:302292-302312:1:exon
so has part: feature:302475-302495:1:exon
so has part: feature:302613-302633:1:exon
so has part: feature:302936-302956:1:exon
so has part: feature:303664-303684:1:exon
so has part: feature:303782-303802:1:exon
so has part: feature:304140-304651:1:exon

XP_032061035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292650-292653:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293257-293277:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:293984-294004:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:294358-294378:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:294592-294612:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:294929-294949:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:295245-295265:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:295574-295594:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:295687-295707:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:296189-296209:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:296496-296516:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:297035-297055:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:297462-297482:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:297757-297777:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:298027-298047:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:298304-298324:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:298597-298620:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:299152-299172:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:301803-301823:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:302292-302312:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:302475-302495:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:302613-302633:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:302936-302956:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:303664-303684:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:303782-303802:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:304140-304651:1:exon

LOC116500259
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 306978..309948
location: region:306978-309948:1
so has part: feature:306978-309948:1:exon
subclass of: SO_0000010

116500259
type: Gene
SIO_000068: ncbigene

position:306978:1
position: 306978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309948:1
position: 309948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306978-309948:1:exon

LOC116500259
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500259
product: tripartite motif-containing protein 10-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
transcript id: XM_032205197.1
SIO_010081: LOC116500259
subclass of: SO_0000673
so part of: LOC116500259
location: join(306978..307361,307842..307937,308021..308251,308390..308412,308782..308897,309051..309110,309434..309948)
location: region:306978-309948:1
so has part: feature:306978-307361:1:exon
so has part: feature:307842-307937:1:exon
so has part: feature:308021-308251:1:exon
so has part: feature:308390-308412:1:exon
so has part: feature:308782-308897:1:exon
so has part: feature:309051-309110:1:exon
so has part: feature:309434-309948:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:306978-307361:1:exon

position:307361:1
position: 307361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:307842-307937:1:exon

position:307842:1
position: 307842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307937:1
position: 307937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:308021-308251:1:exon

position:308021:1
position: 308021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308251:1
position: 308251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:308390-308412:1:exon

position:308390:1
position: 308390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308412:1
position: 308412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:308782-308897:1:exon

position:308782:1
position: 308782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308897:1
position: 308897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:309051-309110:1:exon

position:309051:1
position: 309051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309110:1
position: 309110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:309434-309948:1:exon

position:309434:1
position: 309434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500259
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 10-like
translation: MASAASQARERGEEGAHHMAPKHRPDPEHLSCGGGTAKSCPERGRLGDAEAISHRNHLRKGNFQPKLHLEHLAEKLKLLGLEGGGEEEQLCSWHKRTFAFRRDVKASGCGAPRACGEAHREEPAQEDREQIHRDLESLKKQREELLELKASGERRCQGYLTQTEAERQKIVSEFRQLRRFLKDQEVVLLAQLGELDREVMRRQEEEEAKVSGEISLLDILIWEAERKLEQPTSGFLQSARSTVGRWETSSTRRMTETFLDLERRLRVISQQNDILREALGRFQDILPSELEKEVEPSLGGEGKAFVTLDPDTAHTSLVVSRDRRGVRWTDAGQDLPPDPRRFDVFCCVLGHRGFTAGRHSWEVEVVAGGTWALGVARNSLPRRGCLEFRPEEGVWAMGRCGNRYRAFTSPPATLPTSGNPRRIRVVLDYEGEQVAFYFAKQLPPVFTFQKACFGGESIFPFFWVGTGSHLRLCP
SIO_010081: LOC116500259
subclass of: SO_0000673
so part of: LOC116500259
location: join(306978..307361,307842..307937,308021..308251,308390..308412,308782..308897,309051..309110,309434..309948)
location: region:306978-309948:1
so has part: feature:306978-307361:1:exon
so has part: feature:307842-307937:1:exon
so has part: feature:308021-308251:1:exon
so has part: feature:308390-308412:1:exon
so has part: feature:308782-308897:1:exon
so has part: feature:309051-309110:1:exon
so has part: feature:309434-309948:1:exon

XP_032061088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:306978-307361:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:307842-307937:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308021-308251:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:308390-308412:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:308782-308897:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:309051-309110:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:309434-309948:1:exon

LOC116500270
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500270
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(310394..312868)
location: region:310394-312868:-1
so has part: feature:310394-312868:-1:exon
subclass of: SO_0000010

116500270
type: Gene
SIO_000068: ncbigene

position:310394:-1
position: 310394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312868:-1
position: 312868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310394-312868:-1:exon

LOC116500270
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500270
product: CD209 antigen-like protein E
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032205211.1
SIO_010081: LOC116500270
subclass of: SO_0000673
so part of: LOC116500270
location: complement(join(310394..310660,310820..310932,311327..311481,311722..311868,312000..312220,312832..312868))
location: region:310394-312868:-1
so has part: feature:312832-312868:-1:exon
so has part: feature:312000-312220:-1:exon
so has part: feature:311722-311868:-1:exon
so has part: feature:311327-311481:-1:exon
so has part: feature:310820-310932:-1:exon
so has part: feature:310394-310660:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:312832-312868:-1:exon

position:312832:-1
position: 312832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:312000-312220:-1:exon

position:312000:-1
position: 312000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312220:-1
position: 312220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:311722-311868:-1:exon

position:311722:-1
position: 311722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311868:-1
position: 311868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:311327-311481:-1:exon

position:311327:-1
position: 311327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311481:-1
position: 311481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:310820-310932:-1:exon

position:310820:-1
position: 310820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310932:-1
position: 310932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:310394-310660:-1:exon

position:310660:-1
position: 310660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500270
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD209 antigen-like protein E
translation: MGPDGDTFSPPSPLPLPQRGCEGGHNPGSSHPTGSHRSQYLVASAGWALSTGLAVAVITLGLRVWQLHGSGQCYATLNASATSAENWENGCRGCLERFRLQLKTALCNAPEMDGRGCRLCPRDWLQHGNWCYWVSHESRDWQRSRDDCAQKGSALFIIRNWEQMQVLQDVTQGRGYVWIGLAVTGAKGTWTWLDGSVLDTKQFHVLGSATSGSCALIKDSQIRSEGCNAESRWVCEKDAVAL
SIO_010081: LOC116500270
subclass of: SO_0000673
so part of: LOC116500270
location: complement(join(310537..310660,310820..310932,311327..311481,311722..311868,312000..312189))
location: region:310537-312189:-1
so has part: feature:312000-312189:-1:exon
so has part: feature:311722-311868:-1:exon
so has part: feature:311327-311481:-1:exon
so has part: feature:310820-310932:-1:exon
so has part: feature:310537-310660:-1:exon

XP_032061102.1
type: Protein
SIO_000068: ncbiprotein

position:310537:-1
position: 310537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312189:-1
position: 312189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312000-312189:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:311722-311868:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311327-311481:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:310820-310932:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:310537-310660:-1:exon

LOC116500244
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500244
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 314176..320014
location: region:314176-320014:1
so has part: feature:314176-320014:1:exon
subclass of: SO_0000010

116500244
type: Gene
SIO_000068: ncbigene

position:314176:1
position: 314176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320014:1
position: 320014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314176-320014:1:exon

LOC116500244
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500244
product: zinc finger protein OZF-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 571 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205158.1
SIO_010081: LOC116500244
subclass of: SO_0000673
so part of: LOC116500244
location: join(314176..314513,314742..315866,318466..320014)
location: region:314176-320014:1
so has part: feature:314176-314513:1:exon
so has part: feature:314742-315866:1:exon
so has part: feature:318466-320014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:314176-314513:1:exon

position:314513:1
position: 314513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:314742-315866:1:exon

position:314742:1
position: 314742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315866:1
position: 315866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:318466-320014:1:exon

position:318466:1
position: 318466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500244
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500244
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 271-like isoform X1
translation: MEEGGKLVAPGPPGRELGSTERSQKGDRTWREDEGRHVEQKDLAEGKMGETTVIKPEGDDSGKDHGMEPRKAGDEFARCDGDGQLVVDENLYECSHCKKCFQDRSELICHQRLHRGEKAFKCQECGKEFGKSSDLSSHQKSHMAEKPYQCSTCEKFFKDRSTLIRHERVHTGEKPYKCHECGKRFTRSSDIVVHQRIHTGEKPFECSECGKRFSQRSNLFTHRIVHTGEKPFECHECGKSFARRSELTIHQRTHTEEKPYQCSQCEKSFRGRYGLFRHERLHTGEKPYECSECGKSFGQSGDLITHQRFHTGEKPYQCGECGKFFCNKSSLVKHQKWHSGEKPYKCHECGKSFGQSSDLIAHQRTHTGEKPYPCAECGKRFTRKSSLLVHQRGHRGQRTGEKKYFCKECGKSFRHNSNLIVHRRTHTGEKPYACCACGKPFSDRSNLAKHQRLHSGQKVFRCRDCRKTFGNNPDFLEHQKTHTGERPFKCSECGKRFWHSTKLVMHQKTHAADKIYKCPQCEKRFKDKSTLLRHEMVHTGEKPYECHECEKRFARKSDLTVHQRIHTGEKPFACAECGKSFNHKSNLFTHQRRHTGEKPFRCQECGKNFGHRTDLLVHQRTHTGEKPFRCSECGKCFKGRTTLMRHERQHTGERPYTCPECGKSFGLSADLVVHQRFHTGEKPYKCGECGNFFCNSSSLVRHQRKHTGEKPYKCHECEKSFAQSTDLLEHRTTHTGEKPYPCQQCGKCFGRKSNLIVHQRVHGLGKHRRGGKSFQVNLGRPNGPMDTAAAACSGCT
SIO_010081: LOC116500244
subclass of: SO_0000673
so part of: LOC116500244
location: join(314438..314513,314742..315866,318466..319655)
location: region:314438-319655:1
so has part: feature:314438-314513:1:exon
so has part: feature:314742-315866:1:exon
so has part: feature:318466-319655:1:exon

XP_032061049.1
type: Protein
SIO_000068: ncbiprotein

position:314438:1
position: 314438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319655:1
position: 319655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314438-314513:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:314742-315866:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:318466-319655:1:exon

LOC116500244
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500244
product: zinc finger protein OZF-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 334 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032205159.1
SIO_010081: LOC116500244
subclass of: SO_0000673
so part of: LOC116500244
location: join(317043..317142,317669..317758,318012..318151,318253..320000)
location: region:317043-320000:1
so has part: feature:317043-317142:1:exon
so has part: feature:317669-317758:1:exon
so has part: feature:318012-318151:1:exon
so has part: feature:318253-320000:1:exon

position:317043:1
position: 317043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320000:1
position: 320000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317043-317142:1:exon

position:317142:1
position: 317142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:317669-317758:1:exon

position:317669:1
position: 317669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317758:1
position: 317758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:318012-318151:1:exon

position:318012:1
position: 318012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318151:1
position: 318151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:318253-320000:1:exon

position:318253:1
position: 318253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500244
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500244
product: zinc finger protein OZF-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 334 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032205160.1
SIO_010081: LOC116500244
subclass of: SO_0000673
so part of: LOC116500244
location: join(317043..317142,317669..317758,318012..318151,318256..320000)
location: region:317043-320000:1
so has part: feature:317043-317142:1:exon
so has part: feature:317669-317758:1:exon
so has part: feature:318012-318151:1:exon
so has part: feature:318256-320000:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:317043-317142:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:317669-317758:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:318012-318151:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:318256-320000:1:exon

position:318256:1
position: 318256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500244
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500244
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein OZF-like isoform X2
translation: MEQGEGTWEDAQQSETETLENPWRAGHGTENEVEKGPRWEGPEMSISSLGNSGGNWFWQRMDGTNDLRLQGCAGKDASVAKILEEPNPPAESFAQEKKYFCKECGKSFRHNSNLIVHRRTHTGEKPYACCACGKPFSDRSNLAKHQRLHSGQKVFRCRDCRKTFGNNPDFLEHQKTHTGERPFKCSECGKRFWHSTKLVMHQKTHAADKIYKCPQCEKRFKDKSTLLRHEMVHTGEKPYECHECEKRFARKSDLTVHQRIHTGEKPFACAECGKSFNHKSNLFTHQRRHTGEKPFRCQECGKNFGHRTDLLVHQRTHTGEKPFRCSECGKCFKGRTTLMRHERQHTGERPYTCPECGKSFGLSADLVVHQRFHTGEKPYKCGECGNFFCNSSSLVRHQRKHTGEKPYKCHECEKSFAQSTDLLEHRTTHTGEKPYPCQQCGKCFGRKSNLIVHQRVHGLGKHRRGGKSFQVNLGRPNGPMDTAAAACSGCT
SIO_010081: LOC116500244
subclass of: SO_0000673
so part of: LOC116500244
location: join(318079..318151,318253..319655)
location: region:318079-319655:1
so has part: feature:318079-318151:1:exon
so has part: feature:318253-319655:1:exon

XP_032061050.1
type: Protein
SIO_000068: ncbiprotein

position:318079:1
position: 318079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318079-318151:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:318253-319655:1:exon

LOC116500244
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500244
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein OZF-like isoform X3
translation: MEQGEGTWEDAQQSETETLENPWRGHGTENEVEKGPRWEGPEMSISSLGNSGGNWFWQRMDGTNDLRLQGCAGKDASVAKILEEPNPPAESFAQEKKYFCKECGKSFRHNSNLIVHRRTHTGEKPYACCACGKPFSDRSNLAKHQRLHSGQKVFRCRDCRKTFGNNPDFLEHQKTHTGERPFKCSECGKRFWHSTKLVMHQKTHAADKIYKCPQCEKRFKDKSTLLRHEMVHTGEKPYECHECEKRFARKSDLTVHQRIHTGEKPFACAECGKSFNHKSNLFTHQRRHTGEKPFRCQECGKNFGHRTDLLVHQRTHTGEKPFRCSECGKCFKGRTTLMRHERQHTGERPYTCPECGKSFGLSADLVVHQRFHTGEKPYKCGECGNFFCNSSSLVRHQRKHTGEKPYKCHECEKSFAQSTDLLEHRTTHTGEKPYPCQQCGKCFGRKSNLIVHQRVHGLGKHRRGGKSFQVNLGRPNGPMDTAAAACSGCT
SIO_010081: LOC116500244
subclass of: SO_0000673
so part of: LOC116500244
location: join(318079..318151,318256..319655)
location: region:318079-319655:1
so has part: feature:318079-318151:1:exon
so has part: feature:318256-319655:1:exon

XP_032061051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318079-318151:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:318256-319655:1:exon

LOC116500249
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500249
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(320775..349150)
location: region:320775-349150:-1
so has part: feature:320775-349150:-1:exon
subclass of: SO_0000010

116500249
type: Gene
SIO_000068: ncbigene

position:320775:-1
position: 320775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349150:-1
position: 349150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320775-349150:-1:exon

LOC116500249
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500249
product: zinc finger protein 883-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 258 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032205179.1
SIO_010081: LOC116500249
subclass of: SO_0000673
so part of: LOC116500249
location: complement(join(320775..323206,323374..323478,326032..327029,345901..345910,349138..349150))
location: region:320775-349150:-1
so has part: feature:349138-349150:-1:exon
so has part: feature:345901-345910:-1:exon
so has part: feature:326032-327029:-1:exon
so has part: feature:323374-323478:-1:exon
so has part: feature:320775-323206:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:349138-349150:-1:exon

position:349138:-1
position: 349138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:345901-345910:-1:exon

position:345901:-1
position: 345901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345910:-1
position: 345910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:326032-327029:-1:exon

position:326032:-1
position: 326032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327029:-1
position: 327029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:323374-323478:-1:exon

position:323374:-1
position: 323374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323478:-1
position: 323478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:320775-323206:-1:exon

position:323206:-1
position: 323206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500249
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500249
product: zinc finger protein 883-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 258 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205180.1
SIO_010081: LOC116500249
subclass of: SO_0000673
so part of: LOC116500249
location: complement(join(320775..323203,323374..323478,326032..327079))
location: region:320775-327079:-1
so has part: feature:326032-327079:-1:exon
so has part: feature:323374-323478:-1:exon
so has part: feature:320775-323203:-1:exon

position:327079:-1
position: 327079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326032-327079:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323374-323478:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:320775-323203:-1:exon

position:323203:-1
position: 323203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500249
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500249
product: zinc finger protein 883-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 258 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205178.1
SIO_010081: LOC116500249
subclass of: SO_0000673
so part of: LOC116500249
location: complement(join(320775..323206,323374..323478,326032..327079))
location: region:320775-327079:-1
so has part: feature:326032-327079:-1:exon
so has part: feature:323374-323478:-1:exon
so has part: feature:320775-323206:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:326032-327079:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323374-323478:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:320775-323206:-1:exon

LOC116500249
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500249
product: zinc finger protein 883-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 258 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032205181.1
SIO_010081: LOC116500249
subclass of: SO_0000673
so part of: LOC116500249
location: complement(join(320775..323206,323374..323478,324416..324445))
location: region:320775-324445:-1
so has part: feature:324416-324445:-1:exon
so has part: feature:323374-323478:-1:exon
so has part: feature:320775-323206:-1:exon

position:324445:-1
position: 324445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324416-324445:-1:exon

position:324416:-1
position: 324416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:323374-323478:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:320775-323206:-1:exon

LOC116500249
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500249
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 883-like isoform X2
translation: MEQGFPFLKPACMEQPGELPTPLGMQEEKKPGDPLGGCTPRRARTEPSPTRGHEEGRGDPSIGTGITAGIMASKRAGNGSEGTRPEAAPEAEWRPGEDEDVKVAAHLIPQAGDVKILNGSKAQRGAAAGEKKYACEECGRRFGQSSNLIVHQRIHTGEKPYKCQECGKCFRQSSNLIVHQQTHGGEKLYECPKCQKCFPDRSLLIRHKRIHMGEKPFKCQHCGKSFIHQSRLLVHEKVHAGDQLYQCPQCGKCFRDKSKLLQHQQRHVGERRYKCYECGEEFSQSSDLNLHQRVHVEEKLYQCSTCEKCFKDRSTLIRHETVHTGEKPYQCHECGKRFTRSSDIIVHQRTHTGEKPFECPECGKSFSHRSNLFRHQRMHMGEKPYKCEECGKRFGQSSELIVHQRTHTGEKPYHCSECEKFFRGRSTLFRHERLHTGIKPYECSDCGKSFGQSGDLIAHQRFHTGEKPYQCGECGKSFSNRSSLLRHQRLHAGEKPYKCHECGKSFAQSSDLITHRRTHTGEKPYPCSVCGKSFNRRSNLVVHQRVHGRDRLCKCRQCGRSFQQNSQLALQQNSPRCPECTKWFEEGSNPGEHQR
SIO_010081: LOC116500249
subclass of: SO_0000673
so part of: LOC116500249
location: complement(join(321525..323203,323374..323478,326032..326035))
location: region:321525-326035:-1
so has part: feature:326032-326035:-1:exon
so has part: feature:323374-323478:-1:exon
so has part: feature:321525-323203:-1:exon

XP_032061071.1
type: Protein
SIO_000068: ncbiprotein

position:321525:-1
position: 321525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326035:-1
position: 326035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326032-326035:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323374-323478:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321525-323203:-1:exon

LOC116500249
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500249
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 883-like isoform X1
translation: MEQGFPFLKPACMEQPGELPTPLGMQEEKKPGDPLGAGCTPRRARTEPSPTRGHEEGRGDPSIGTGITAGIMASKRAGNGSEGTRPEAAPEAEWRPGEDEDVKVAAHLIPQAGDVKILNGSKAQRGAAAGEKKYACEECGRRFGQSSNLIVHQRIHTGEKPYKCQECGKCFRQSSNLIVHQQTHGGEKLYECPKCQKCFPDRSLLIRHKRIHMGEKPFKCQHCGKSFIHQSRLLVHEKVHAGDQLYQCPQCGKCFRDKSKLLQHQQRHVGERRYKCYECGEEFSQSSDLNLHQRVHVEEKLYQCSTCEKCFKDRSTLIRHETVHTGEKPYQCHECGKRFTRSSDIIVHQRTHTGEKPFECPECGKSFSHRSNLFRHQRMHMGEKPYKCEECGKRFGQSSELIVHQRTHTGEKPYHCSECEKFFRGRSTLFRHERLHTGIKPYECSDCGKSFGQSGDLIAHQRFHTGEKPYQCGECGKSFSNRSSLLRHQRLHAGEKPYKCHECGKSFAQSSDLITHRRTHTGEKPYPCSVCGKSFNRRSNLVVHQRVHGRDRLCKCRQCGRSFQQNSQLALQQNSPRCPECTKWFEEGSNPGEHQR
SIO_010081: LOC116500249
subclass of: SO_0000673
so part of: LOC116500249
location: complement(join(321525..323206,323374..323478,326032..326035))
location: region:321525-326035:-1
so has part: feature:326032-326035:-1:exon
so has part: feature:323374-323478:-1:exon
so has part: feature:321525-323206:-1:exon

XP_032061069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:326032-326035:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323374-323478:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321525-323206:-1:exon

LOC116500249
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500249
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 883-like isoform X1
translation: MEQGFPFLKPACMEQPGELPTPLGMQEEKKPGDPLGAGCTPRRARTEPSPTRGHEEGRGDPSIGTGITAGIMASKRAGNGSEGTRPEAAPEAEWRPGEDEDVKVAAHLIPQAGDVKILNGSKAQRGAAAGEKKYACEECGRRFGQSSNLIVHQRIHTGEKPYKCQECGKCFRQSSNLIVHQQTHGGEKLYECPKCQKCFPDRSLLIRHKRIHMGEKPFKCQHCGKSFIHQSRLLVHEKVHAGDQLYQCPQCGKCFRDKSKLLQHQQRHVGERRYKCYECGEEFSQSSDLNLHQRVHVEEKLYQCSTCEKCFKDRSTLIRHETVHTGEKPYQCHECGKRFTRSSDIIVHQRTHTGEKPFECPECGKSFSHRSNLFRHQRMHMGEKPYKCEECGKRFGQSSELIVHQRTHTGEKPYHCSECEKFFRGRSTLFRHERLHTGIKPYECSDCGKSFGQSGDLIAHQRFHTGEKPYQCGECGKSFSNRSSLLRHQRLHAGEKPYKCHECGKSFAQSSDLITHRRTHTGEKPYPCSVCGKSFNRRSNLVVHQRVHGRDRLCKCRQCGRSFQQNSQLALQQNSPRCPECTKWFEEGSNPGEHQR
SIO_010081: LOC116500249
subclass of: SO_0000673
so part of: LOC116500249
location: complement(join(321525..323206,323374..323478,326032..326035))
location: region:321525-326035:-1
so has part: feature:326032-326035:-1:exon
so has part: feature:323374-323478:-1:exon
so has part: feature:321525-323206:-1:exon

XP_032061070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:326032-326035:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323374-323478:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321525-323206:-1:exon

LOC116500249
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500249
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 883-like isoform X3
translation: MEQPGELPTPLGMQEEKKPGDPLGAGCTPRRARTEPSPTRGHEEGRGDPSIGTGITAGIMASKRAGNGSEGTRPEAAPEAEWRPGEDEDVKVAAHLIPQAGDVKILNGSKAQRGAAAGEKKYACEECGRRFGQSSNLIVHQRIHTGEKPYKCQECGKCFRQSSNLIVHQQTHGGEKLYECPKCQKCFPDRSLLIRHKRIHMGEKPFKCQHCGKSFIHQSRLLVHEKVHAGDQLYQCPQCGKCFRDKSKLLQHQQRHVGERRYKCYECGEEFSQSSDLNLHQRVHVEEKLYQCSTCEKCFKDRSTLIRHETVHTGEKPYQCHECGKRFTRSSDIIVHQRTHTGEKPFECPECGKSFSHRSNLFRHQRMHMGEKPYKCEECGKRFGQSSELIVHQRTHTGEKPYHCSECEKFFRGRSTLFRHERLHTGIKPYECSDCGKSFGQSGDLIAHQRFHTGEKPYQCGECGKSFSNRSSLLRHQRLHAGEKPYKCHECGKSFAQSSDLITHRRTHTGEKPYPCSVCGKSFNRRSNLVVHQRVHGRDRLCKCRQCGRSFQQNSQLALQQNSPRCPECTKWFEEGSNPGEHQR
SIO_010081: LOC116500249
subclass of: SO_0000673
so part of: LOC116500249
location: complement(join(321525..323206,323374..323446))
location: region:321525-323446:-1
so has part: feature:323374-323446:-1:exon
so has part: feature:321525-323206:-1:exon

XP_032061072.1
type: Protein
SIO_000068: ncbiprotein

position:323446:-1
position: 323446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323374-323446:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:321525-323206:-1:exon

LOC116500231
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(327174..764788)
location: region:327174-764788:-1
so has part: feature:327174-764788:-1:exon
subclass of: SO_0000010

116500231
type: Gene
SIO_000068: ncbigene

position:327174:-1
position: 327174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:764788:-1
position: 764788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327174-764788:-1:exon

LOC116500231
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500231
product: zinc finger protein 208-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 204 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205145.1
SIO_010081: LOC116500231
subclass of: SO_0000673
so part of: LOC116500231
location: complement(join(327174..327925,456523..457351,457421..457607,755495..756019,763515..764788))
location: region:327174-764788:-1
so has part: feature:763515-764788:-1:exon
so has part: feature:755495-756019:-1:exon
so has part: feature:457421-457607:-1:exon
so has part: feature:456523-457351:-1:exon
so has part: feature:327174-327925:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:763515-764788:-1:exon

position:763515:-1
position: 763515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:755495-756019:-1:exon

position:755495:-1
position: 755495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:756019:-1
position: 756019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:457421-457607:-1:exon

position:457421:-1
position: 457421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457607:-1
position: 457607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:456523-457351:-1:exon

position:456523:-1
position: 456523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457351:-1
position: 457351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:327174-327925:-1:exon

position:327925:-1
position: 327925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500231
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500231
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; substituted 3 bases at 3 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(764373..764375),aa:OTHER)
transl except: (pos:complement(763935..763937),aa:OTHER)
transl except: (pos:complement(763617..763619),aa:OTHER)
product: LOW QUALITY PROTEIN: zinc finger protein 208-like
translation: MGRSYNIREARRPEGTACGTSYGCPDCGKTFSGRSFLVPHQRIHTGDXPFTCHECGKGFRVGSSLNKHQRIHTGEKPYKCSVCGKSFRLSSTLSTHWKVHTREKPYTCLVCGKAFRVNSYLLAHQATHGVDNPFQCPAXRKHFSMRRYLAIHQRIHTGEKPFKCPECRKGFSQRSILIIHQWTHTGEKPYKCLSCEKTFRLSSHLTRHQRCHTGERPYKCTDCGQSYTDSSGLIKHRRLHAGEKKSTLSTAQGARKRLYKCSCCGKIFSMKSALMVHQMSHTGEXPYKCPKCEKTFSHSTALGKHQWVHTGERPFKCPDCGKGYADGSTLRRHQRSHTKVRPYKCPGCGECFSVISALLKHQRLHTKDRLYRCPDCEKSFHSNFLLVTHQXTHTGEKPYTCPNCAEAFRQASHLTRHQKIHTRSGEKVYRCSKCGKSFNQKNNLSRHLRMHTGERSYKCSECWRSFSDHSNLISHQKLHRGEKPXECLDCGKRFSQSTSLLAHHWIHTGEKPYVCFSCGKRFARRQNLTMHQSIHTEERPYFCQDCGKSFWRSSDLIRHENPHTGERPYKCPDCGKGFTRSSKLMDHQRTHTGEAPYRCLVKCGKSFSRGSSLNRHQRVHVGEKPFACCKCGRSFVCSSSLKDHLKNPCQEKPYKCPKCEKRFCGKNLTSNSALLIHHRIHTGERPYKCPECGKSFMANKSLSKHRKSHTEDGIFVCPDCGKKLTSNSTLIIHRRIHTGERPYECPECGKRFMANKSLSKHRKSHLEEGTYKCPQCRESFTKNSAYVAHLRTHQGQPPYRCSDCGEAFFESSAFNQHRKKHLVGKPYQCPDCGMGFTLPSALLLHQKSHVGPRPHVCSDCGKAFRETTSLRRHQRIHTGEKPYQCSYCEKSFRASSTLIIHQRIHTGEKPYKCTKCTKCFMSSSSLMKHLRTHLRKELHNDVGEKPFKCPECGRSFMRSSDLIVHQRTHTGEKPYQCPECGRCFNRSSSLVTHQRVHTGEKMYKCPECAKSFTRSSTLTAHQRTHTGEKPYQCCECGKSFSKRSNLIKHQRQHTGERPYRCPDCGKSFIQSSDLIVHQRTHTGEKPYQCSECGKCFSVRSKLIQHQRVHTGEKPYTCAECGKSFGQSSHLSVHQKTHRGEKSALRVWKVIQCEILPC
SIO_010081: LOC116500231
subclass of: SO_0000673
so part of: LOC116500231
location: complement(join(327270..327925,456523..457351,457421..457607,755495..756019,763515..764788))
location: region:327270-764788:-1
so has part: feature:763515-764788:-1:exon
so has part: feature:755495-756019:-1:exon
so has part: feature:457421-457607:-1:exon
so has part: feature:456523-457351:-1:exon
so has part: feature:327270-327925:-1:exon

XP_032061036.1
type: Protein
SIO_000068: ncbiprotein

position:327270:-1
position: 327270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:763515-764788:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:755495-756019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457421-457607:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:456523-457351:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:327270-327925:-1:exon

LOC116500278
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500278
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 453919..454491
location: region:453919-454491:1
so has part: feature:453919-454491:1:exon
subclass of: SO_0000011

116500278
type: Gene
SIO_000068: ncbigene

position:453919:1
position: 453919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454491:1
position: 454491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453919-454491:1:exon

LOC116500278
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116500278
product: uncharacterized LOC116500278
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004254275.1
SIO_010081: LOC116500278
subclass of: SO_0000673
so part of: LOC116500278
location: join(453919..453939,454098..454130,454308..454491)
location: region:453919-454491:1
so has part: feature:453919-453939:1:exon
so has part: feature:454098-454130:1:exon
so has part: feature:454308-454491:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:453919-453939:1:exon

position:453939:1
position: 453939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:454098-454130:1:exon

position:454098:1
position: 454098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454130:1
position: 454130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:454308-454491:1:exon

position:454308:1
position: 454308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRNAL-AAG
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAL-AAG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 460460..460541
location: region:460460-460541:1
so has part: feature:460460-460541:1:exon
subclass of: SO_0000663

116500285
type: Gene
SIO_000068: ncbigene

position:460460:1
position: 460460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460541:1
position: 460541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460460-460541:1:exon

TRNAL-AAG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAL-AAG
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon AAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:460494..460496,aa:Leu,seq:aag)
SIO_010081: TRNAL-AAG
subclass of: SO_0000673
so part of: TRNAL-AAG
location: 460460..460541
location: region:460460-460541:1
so has part: feature:460460-460541:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:460460-460541:1:exon

LOC116500281
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500281
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(470802..482735)
location: region:470802-482735:-1
so has part: feature:470802-482735:-1:exon
subclass of: SO_0000010

116500281
type: Gene
SIO_000068: ncbigene

position:470802:-1
position: 470802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482735:-1
position: 482735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470802-482735:-1:exon

LOC116500281
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500281
product: uncharacterized LOC116500281
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 52% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205227.1
SIO_010081: LOC116500281
subclass of: SO_0000673
so part of: LOC116500281
location: complement(join(470802..470857,471231..471251,471969..471989,472441..472461,472979..473086,473663..473944,474951..475298,476191..476298,481898..482735))
location: region:470802-482735:-1
so has part: feature:481898-482735:-1:exon
so has part: feature:476191-476298:-1:exon
so has part: feature:474951-475298:-1:exon
so has part: feature:473663-473944:-1:exon
so has part: feature:472979-473086:-1:exon
so has part: feature:472441-472461:-1:exon
so has part: feature:471969-471989:-1:exon
so has part: feature:471231-471251:-1:exon
so has part: feature:470802-470857:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:481898-482735:-1:exon

position:481898:-1
position: 481898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:476191-476298:-1:exon

position:476191:-1
position: 476191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476298:-1
position: 476298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:474951-475298:-1:exon

position:474951:-1
position: 474951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475298:-1
position: 475298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:473663-473944:-1:exon

position:473663:-1
position: 473663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473944:-1
position: 473944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:472979-473086:-1:exon

position:472979:-1
position: 472979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473086:-1
position: 473086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:472441-472461:-1:exon

position:472441:-1
position: 472441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472461:-1
position: 472461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:471969-471989:-1:exon

position:471969:-1
position: 471969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471989:-1
position: 471989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:471231-471251:-1:exon

position:471231:-1
position: 471231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471251:-1
position: 471251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:470802-470857:-1:exon

position:470857:-1
position: 470857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500281
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500281
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116500281
translation: MVIGLPGNALVLWSCAATRRRGIPMLLVFHLALADVATLLTGPVYIRFLSTGRWDLGLAACRGCNYICAAAMYASVFLIALLGLHRCLVVSRPSAAVVAGDRAAQLAHGAAAVTWLVALILATPSIAFRHVEDGHCKRKHSSTAWLVTHNLLETGLGWALPLTAVAAGYGLLLQRLRRTRLARRGRTLGLVAAVVVAFAVTWGPYHIASLLEVVAKLQKGNGPLNRVARAIRPPATALAFLSSALNPLLYACAGRGLCHTAGTSFLPRLLEGSTVFHSSLKVDVKMLVSSCLLCSSFVLACATIFFGFHVHKLDCAQFQVLGSDHPITATVGGDAVLPCHLSPRMNAEHMEVRWFRSRFSIYVHLYQSGQDHFSSQMPEYQGRTEFLKGGVSNGNVSLRILRTRLSDEGQYQCLIKDGNFYEEATLELKVAVSGSSPLLSVEDYQDGGIRVGCRAAGWYPKPEMLWRDFQGQQLPSFTESTSQDKNGFFQVEKTIIIHKNSKQNLSCSVQNTRLPQEKDSSIYISDAIFPEVSPWMVTFFAILAVCLALLIFLPLIFYRLQAKHTTELEKRSAEIRERDMEIQKHAAELRKFNPCSSPPS
SIO_010081: LOC116500281
subclass of: SO_0000673
so part of: LOC116500281
location: complement(join(470802..470857,471231..471251,471969..471989,472441..472461,472979..473086,473663..473944,474951..475298,476191..476298,481898..482735))
location: region:470802-482735:-1
so has part: feature:481898-482735:-1:exon
so has part: feature:476191-476298:-1:exon
so has part: feature:474951-475298:-1:exon
so has part: feature:473663-473944:-1:exon
so has part: feature:472979-473086:-1:exon
so has part: feature:472441-472461:-1:exon
so has part: feature:471969-471989:-1:exon
so has part: feature:471231-471251:-1:exon
so has part: feature:470802-470857:-1:exon

XP_032061118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:481898-482735:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476191-476298:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474951-475298:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:473663-473944:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472979-473086:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:472441-472461:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:471969-471989:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:471231-471251:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:470802-470857:-1:exon

LOC116500242
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500242
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 490430..495863
location: region:490430-495863:1
so has part: feature:490430-495863:1:exon
subclass of: SO_0000010

116500242
type: Gene
SIO_000068: ncbigene

position:490430:1
position: 490430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495863:1
position: 495863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490430-495863:1:exon

LOC116500242
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500242
product: zinc finger protein 493-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 474 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205157.1
SIO_010081: LOC116500242
subclass of: SO_0000673
so part of: LOC116500242
location: join(490430..490608,490779..490905,492032..492142,492270..495863)
location: region:490430-495863:1
so has part: feature:490430-490608:1:exon
so has part: feature:490779-490905:1:exon
so has part: feature:492032-492142:1:exon
so has part: feature:492270-495863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:490430-490608:1:exon

position:490608:1
position: 490608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:490779-490905:1:exon

position:490779:1
position: 490779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490905:1
position: 490905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:492032-492142:1:exon

position:492032:1
position: 492032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492142:1
position: 492142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:492270-495863:1:exon

position:492270:1
position: 492270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500242
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500242
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 493-like
translation: MATAHPAEEPVTFVEVAVYFSREEWELLHPAQQVLYRDVMLETYESITSLGLLPSPKPVVISQLEEGEDPWIPDLHGVEDVTGDLSPGDRITKAAETLQKGGVAQRQLNAVSVGKNRRGVQKGLEHGKHLKKPLQTHPGNGARKPLDGSKGQKETKELTMKQGCQKKLENQCDECGKIFKSHSYLLKHRRIHTGDNPTCTECGKSYIKRSSLAIHQRIHTGERPYKCLECEESFKTRSELKFHKRTHKGERPYKCPECEKSFLSSSGLNVHKRIHTGERPYKCPDCEKSFNTSSGLNVHKWIHTGERPYKCPDCGKGFIRISLLNLHKWIHTEERPYKCPDCEKSFHSRSGLKWHKQIHTGERPYKCPDCEKSFKTSSELKLHKQTHTGERPYKCADCEKSFQSNYGLNLHKWIHTGERPYKCPDCGKGFIRISVLNLHKRIHMEERPYKCPECEKSFYSSSGLNLHKRIHTGERPYKCPECEKSFHSNSGLKWHKWIHTGERPYKCPDCGKGFINISLLNLHKWIHTEERPYKCPECGKGFIRSSALNLHKRIHAGERPYKCPECEKTFQSNYGLNLHKRIHTGERPYKCPECGKGFIRSSALNVHKWIHTGERPYKCPDCGKGFIKISLLNLHKQIHTEERPYKCPDCGKGFIKISLLNLHKQIHTEERPYKCPECEKSFYSSSGLKWHKGTHTGERPYKCPDCEKTFQSNYRLKLHKRIHTGERPYKCPECGKGFVRSSELNLHKRIHTGERPYKCPECEKTFQSNYRLKLHKRIHTGERPYKCPECGKGFQSRYRLKLHKRTHTGERPYKCPDCAKAFKSNSELRSHKCIHKGDKL
SIO_010081: LOC116500242
subclass of: SO_0000673
so part of: LOC116500242
location: join(490585..490608,490779..490905,492032..492142,492270..494530)
location: region:490585-494530:1
so has part: feature:490585-490608:1:exon
so has part: feature:490779-490905:1:exon
so has part: feature:492032-492142:1:exon
so has part: feature:492270-494530:1:exon

XP_032061048.1
type: Protein
SIO_000068: ncbiprotein

position:490585:1
position: 490585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494530:1
position: 494530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490585-490608:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490779-490905:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:492032-492142:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:492270-494530:1:exon

LOC116500247
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500247
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 500484..504590
location: region:500484-504590:1
so has part: feature:500484-504590:1:exon
subclass of: SO_0000010

116500247
type: Gene
SIO_000068: ncbigene

position:500484:1
position: 500484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504590:1
position: 504590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500484-504590:1:exon

LOC116500247
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500247
product: zinc finger protein 595-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 391 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205176.1
SIO_010081: LOC116500247
subclass of: SO_0000673
so part of: LOC116500247
location: join(500484..500566,500716..500842,501505..501615,501740..504590)
location: region:500484-504590:1
so has part: feature:500484-500566:1:exon
so has part: feature:500716-500842:1:exon
so has part: feature:501505-501615:1:exon
so has part: feature:501740-504590:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:500484-500566:1:exon

position:500566:1
position: 500566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:500716-500842:1:exon

position:500716:1
position: 500716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500842:1
position: 500842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:501505-501615:1:exon

position:501505:1
position: 501505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501615:1
position: 501615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:501740-504590:1:exon

position:501740:1
position: 501740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500247
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500247
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 595-like
translation: MATAHPAEEPVTFVEVAVYFSREEWELLHPAQRVLYRDVMLETYESITSLGLLPSPKPVVISQLEEGEDPWIPDLHGVEDVTGDLSPAGDRITKAAETLQKGGVAQRQLNAVSVGKTRRGVQKGLEHGKHLKKPLQTHPGNGARKPLDGSKGQKEAKELTMKQGCQKKLENQCDECGKIFKRHSYLLKHRRIHTGDKPYKCTECGKSYLTSSSLVIHQRIHTGERPYKCLECEKSFRSSSELAYHHHVHRGEKPHKCPDCEKSFIKSCELKLHKRIHNGERPYKCPECGKSFQSRSGLKWHKGTHTGERPYKCPDCGKGFIRISELKLHKGTHTEERPYKCPECGKGFITSFVLSIHKQIHTGERPHKCPECDKSYKRRVNLIYHQHFHTGEKPYKCPECGKGFISSFLLNFHKRIHAGERPYKCSQCEKSFLSISGLKWHKWIHTGERPYKCPDCEKSFLSSSGLKLHKRIHTGERPYKCPDCGKVFSRTSSLKLHKRIHTEERPYKCPECEKSFKTSSDFKLHKRTHTGERPYKCPECGKDFIRNFLLKLHKLIHTGERPYKCSQCEKSYRRREGLIYHQRFHTGEKPYKCPECGESFKASSGLNAHKWIHTGERPYKCSQCEKSFLSSSGLKWHKGTHTGERPYKCPDCAKAFKSSSELRSHKRIHKGEKL
SIO_010081: LOC116500247
subclass of: SO_0000673
so part of: LOC116500247
location: join(500543..500566,500716..500842,501505..501615,501740..503502)
location: region:500543-503502:1
so has part: feature:500543-500566:1:exon
so has part: feature:500716-500842:1:exon
so has part: feature:501505-501615:1:exon
so has part: feature:501740-503502:1:exon

XP_032061067.1
type: Protein
SIO_000068: ncbiprotein

position:500543:1
position: 500543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503502:1
position: 503502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500543-500566:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:500716-500842:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:501505-501615:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:501740-503502:1:exon

LOC116500268
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500268
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(508252..510449)
location: region:508252-510449:-1
so has part: feature:508252-510449:-1:exon
subclass of: SO_0000010

116500268
type: Gene
SIO_000068: ncbigene

position:508252:-1
position: 508252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510449:-1
position: 510449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508252-510449:-1:exon

LOC116500268
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500268
product: antigen-presenting glycoprotein CD1d-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032205210.1
SIO_010081: LOC116500268
subclass of: SO_0000673
so part of: LOC116500268
location: complement(join(508252..509018,509091..509187,509276..509560,509666..509947,510412..510449))
location: region:508252-510449:-1
so has part: feature:510412-510449:-1:exon
so has part: feature:509666-509947:-1:exon
so has part: feature:509276-509560:-1:exon
so has part: feature:509091-509187:-1:exon
so has part: feature:508252-509018:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:510412-510449:-1:exon

position:510412:-1
position: 510412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:509666-509947:-1:exon

position:509666:-1
position: 509666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509947:-1
position: 509947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:509276-509560:-1:exon

position:509276:-1
position: 509276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509560:-1
position: 509560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:509091-509187:-1:exon

position:509091:-1
position: 509091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509187:-1
position: 509187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:508252-509018:-1:exon

position:509018:-1
position: 509018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500268
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500268
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antigen-presenting glycoprotein CD1d-like
translation: MHEMAAYVQAEYPVVFQLHTGCELHPNGTSRAFAKIGEGGRDLVEYEAGRRYWAVQQSTLLAKLVGKSLNGMMAVTEMVEHLLYKTCPSHVRALCRYGKADLERQETPTATVFARKAGPAQLLLVCRITGFYPRSISVAWLRDGHEVPPGPALNTSAVLPNADLTYQVYSGLTVAPHDGHSYACRVRHRSLGTRSLLIPWENRIVTPAVIIVIVVLVLAVAIAIGAAWWWRYRKGAVSRQDPRESLI
SIO_010081: LOC116500268
subclass of: SO_0000673
so part of: LOC116500268
location: complement(join(508973..509018,509091..509187,509276..509560,509666..509947,510412..510445))
location: region:508973-510445:-1
so has part: feature:510412-510445:-1:exon
so has part: feature:509666-509947:-1:exon
so has part: feature:509276-509560:-1:exon
so has part: feature:509091-509187:-1:exon
so has part: feature:508973-509018:-1:exon

XP_032061101.1
type: Protein
SIO_000068: ncbiprotein

position:508973:-1
position: 508973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510445:-1
position: 510445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510412-510445:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:509666-509947:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:509276-509560:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:509091-509187:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:508973-509018:-1:exon

LOC116500210
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 512882..558269
location: region:512882-558269:1
so has part: feature:512882-558269:1:exon
subclass of: SO_0000010

116500210
type: Gene
SIO_000068: ncbigene

position:512882:1
position: 512882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558269:1
position: 558269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512882-558269:1:exon

LOC116500210
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500210
product: tenascin-X-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205124.1
SIO_010081: LOC116500210
subclass of: SO_0000673
so part of: LOC116500210
location: join(512882..513131,513337..513618,513730..514014,521539..521651,522456..522609,523607..524563,524640..524729,524909..525196,525951..526244,527017..527310,528723..529016,529272..529565,530540..530833,531086..531379,532616..532909,533167..533460,533714..534007,534359..534652,534906..535199,535454..535747,536980..537273,537527..537820,538173..538466,538724..539017,539768..540061,540403..540699,542532..542825,543140..543430,543772..544068,544623..544910,545743..546036,546961..547254,547607..547900,548154..548447,548660..548953,549309..549602,554345..554469,554847..554979,555144..555295,556281..556377,556558..556719,557482..557645,558116..558269)
location: region:512882-558269:1
so has part: feature:512882-513131:1:exon
so has part: feature:513337-513618:1:exon
so has part: feature:513730-514014:1:exon
so has part: feature:521539-521651:1:exon
so has part: feature:522456-522609:1:exon
so has part: feature:523607-524563:1:exon
so has part: feature:524640-524729:1:exon
so has part: feature:524909-525196:1:exon
so has part: feature:525951-526244:1:exon
so has part: feature:527017-527310:1:exon
so has part: feature:528723-529016:1:exon
so has part: feature:529272-529565:1:exon
so has part: feature:530540-530833:1:exon
so has part: feature:531086-531379:1:exon
so has part: feature:532616-532909:1:exon
so has part: feature:533167-533460:1:exon
so has part: feature:533714-534007:1:exon
so has part: feature:534359-534652:1:exon
so has part: feature:534906-535199:1:exon
so has part: feature:535454-535747:1:exon
so has part: feature:536980-537273:1:exon
so has part: feature:537527-537820:1:exon
so has part: feature:538173-538466:1:exon
so has part: feature:538724-539017:1:exon
so has part: feature:539768-540061:1:exon
so has part: feature:540403-540699:1:exon
so has part: feature:542532-542825:1:exon
so has part: feature:543140-543430:1:exon
so has part: feature:543772-544068:1:exon
so has part: feature:544623-544910:1:exon
so has part: feature:545743-546036:1:exon
so has part: feature:546961-547254:1:exon
so has part: feature:547607-547900:1:exon
so has part: feature:548154-548447:1:exon
so has part: feature:548660-548953:1:exon
so has part: feature:549309-549602:1:exon
so has part: feature:554345-554469:1:exon
so has part: feature:554847-554979:1:exon
so has part: feature:555144-555295:1:exon
so has part: feature:556281-556377:1:exon
so has part: feature:556558-556719:1:exon
so has part: feature:557482-557645:1:exon
so has part: feature:558116-558269:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:512882-513131:1:exon

position:513131:1
position: 513131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:513337-513618:1:exon

position:513337:1
position: 513337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513618:1
position: 513618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:513730-514014:1:exon

position:513730:1
position: 513730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514014:1
position: 514014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:521539-521651:1:exon

position:521539:1
position: 521539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521651:1
position: 521651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:522456-522609:1:exon

position:522456:1
position: 522456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522609:1
position: 522609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:523607-524563:1:exon

position:523607:1
position: 523607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524563:1
position: 524563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:524640-524729:1:exon

position:524640:1
position: 524640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524729:1
position: 524729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:524909-525196:1:exon

position:524909:1
position: 524909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525196:1
position: 525196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:525951-526244:1:exon

position:525951:1
position: 525951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526244:1
position: 526244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:527017-527310:1:exon

position:527017:1
position: 527017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527310:1
position: 527310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:528723-529016:1:exon

position:528723:1
position: 528723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529016:1
position: 529016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:529272-529565:1:exon

position:529272:1
position: 529272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529565:1
position: 529565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:530540-530833:1:exon

position:530540:1
position: 530540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530833:1
position: 530833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:531086-531379:1:exon

position:531086:1
position: 531086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531379:1
position: 531379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:532616-532909:1:exon

position:532616:1
position: 532616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532909:1
position: 532909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:533167-533460:1:exon

position:533167:1
position: 533167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533460:1
position: 533460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:533714-534007:1:exon

position:533714:1
position: 533714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534007:1
position: 534007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:534359-534652:1:exon

position:534359:1
position: 534359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534652:1
position: 534652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:534906-535199:1:exon

position:534906:1
position: 534906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535199:1
position: 535199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:535454-535747:1:exon

position:535454:1
position: 535454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535747:1
position: 535747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:536980-537273:1:exon

position:536980:1
position: 536980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537273:1
position: 537273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:537527-537820:1:exon

position:537527:1
position: 537527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537820:1
position: 537820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:538173-538466:1:exon

position:538173:1
position: 538173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538466:1
position: 538466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:538724-539017:1:exon

position:538724:1
position: 538724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539017:1
position: 539017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:539768-540061:1:exon

position:539768:1
position: 539768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540061:1
position: 540061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:540403-540699:1:exon

position:540403:1
position: 540403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540699:1
position: 540699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:542532-542825:1:exon

position:542532:1
position: 542532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542825:1
position: 542825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:543140-543430:1:exon

position:543140:1
position: 543140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543430:1
position: 543430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:543772-544068:1:exon

position:543772:1
position: 543772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544068:1
position: 544068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:544623-544910:1:exon

position:544623:1
position: 544623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544910:1
position: 544910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:545743-546036:1:exon

position:545743:1
position: 545743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546036:1
position: 546036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:546961-547254:1:exon

position:546961:1
position: 546961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547254:1
position: 547254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:547607-547900:1:exon

position:547607:1
position: 547607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547900:1
position: 547900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:548154-548447:1:exon

position:548154:1
position: 548154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548447:1
position: 548447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:548660-548953:1:exon

position:548660:1
position: 548660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548953:1
position: 548953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:549309-549602:1:exon

position:549309:1
position: 549309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549602:1
position: 549602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:554345-554469:1:exon

position:554345:1
position: 554345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554469:1
position: 554469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:554847-554979:1:exon

position:554847:1
position: 554847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554979:1
position: 554979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:555144-555295:1:exon

position:555144:1
position: 555144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555295:1
position: 555295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:556281-556377:1:exon

position:556281:1
position: 556281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556377:1
position: 556377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:556558-556719:1:exon

position:556558:1
position: 556558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556719:1
position: 556719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:557482-557645:1:exon

position:557482:1
position: 557482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557645:1
position: 557645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:558116-558269:1:exon

position:558116:1
position: 558116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tenascin-X-like
translation: MLQLRHFVTFQNATSMQVGGLGLVGDIKIGSLDRRTGDIHYHQPWLRPALPKGDWDVIESSIKSYLRDFNSLVQKLTNHIRVSYPFVFQSSICCKLQPNGTTRTFLAIAYEGEDLLQFHMNKGTWDRVPDNEMSATAEHLLNNATTLNELIQVLLNVTCVDILERFIEYGRASLERHELPTATVFARKAGPAQLLLVCRITGFYPRPISVAWLRDGHEVPPGPALNTSAVLPNADLTYQVYSGLTVAPRDGHSYACRVRHRSLGTRSLLIPWEIPAVTPRLTARNQTSFRVSWPRPSMPVDGYQVALIPMDEPEAMATHELPGSAVTFEVTGLVPGSAFELFIQAQRDQHLGMPGTLRVRTLIAQPLPTHGGPLGSPTFLASPVAPASPSARGSPASPRSPVSPASPGSPGSLGSPASPVSPDASLVLPGSLGSPASPTSPRSPGSPASPGSPRSPASPRSPVSPVSPASPASPESSWSPVSPRSPEAPASPVSPRSPAFPRSPASPKSPVSPASPMSPVLPGVPSLHDLGAKLSSYNGSLLQRLESHLRATAFPLRGNQTVPAVARAILSYLLRRSPASLRYQFLRQLHQSPHPKPQLMPGAAGEALVDLDGLRGHSETVVIRYRPLGELEGAEGELQVPGDTAVARVPGLVPGAMYRVEVHGVVQGRISKSYTSLVTAGVGGTSEPPIDWEQLYEMELTEPQGAMAKAAPSEEEPPQRPRLGELTASHVTPTTVQLEWNVLEGTFDSFTVQYRDAQGQPQALAVDGGSRTVTVPGLLPSRRYKFNLYGVWGRKRIGLISTDAITAPALPKEDLPSQPRLGELTASHVTPDSIQLEWSVPKGTFDSFAVQYRDAQGQLQVLPVDGGSRTVTVPGLSPSHRYKFNLYGMWGRKRVGPISTDAVTDAVIPEEQPPSEPRLGDLTASHVTPDSVQLEWSIPEGTFDSFVVQYRDEQGQPQLLPVDGDSRTVTVPGLSPSRRYKFNLYGMWGRKRVGPISTDAVTAEVKPKKKPPSEPRLGELAASHITPSSVQLEWSIPEGTFDSFTVQYKDVQGLPQVLPVDGSSRTVTVSGLSPSRRYKFNLYGMWGRKRVGPISTDAVTAAVEPEKEPLSEPSLGDLTTSHITPDSVQLEWSIPEGSFDSFVVQYKDAQGQPQVLPVDRDSRTVTVPGLSPSRRYKFNLYGMWGRKRVGPVSTDAVTAAVEPEKEPLSEPRLGEFRASHVTPDSVQLEWSIPEGTFESFTVQYKDAQGQPQVLPVEGDSRTVTVPGLSPSRRYKFNLYGMWGRKRVGPISTDAVTAAVEPEIEPPSEPRLGDLTASHVTPDSVQLEWSVPEGTFDSFVVQYKDAQGQPQVLPVDRDSRTVTVPGLSPSRRYKFNLYGMWGRKRVGPVSTDAVTDASELEREPPSQPRLGDLTASHVTPDSVQLEWSNPEGTFDSFVVQYKDAQGQPQVLPVDGDSRTVTVPGLSPSRRYKFNLYGMWGRKRVGPISTDAVTAAVEPVKEPPSEPRLGELTASHVTPDSVQLEWSVPEGTFDSFVVQYKDAQGQPQVLPVEGDSRTVTVPGLSPSRRYKFNLYGMWGRKRVGPISTDAVTAAVEPEKEPPSEPRLGDLTASHVTPDSVQLEWSISKGTFDSFTVQYKDAQGQPQVLPVDGDSRTLTVPGLSPSRRYKFNLYGMWGRKRVGPISTDTITATVQPEEERPSEPKLGELIASHITSESIQLEWSIPEGTFDSFVVQYKDAQGQPQVLPVDGDSHTVTVPELSPSRRYKFNLYGMWGRKRVGPISTDAVTAAVEPETEPPPEPRLGDLTASHVSPDSVQLEWSISKGTFDSFMVQYKDAQGQPQVLPVDGDSRTVIVPGLSPSRRYKFNLYGMWGRKRVGPISTDAVTAAVEPVKEPLSEPRLGDLTASHVTPDSVQLEWSVPEGSFDSFVVQYKDAQGQPQVLPVDRDSRTVTVPGLSPSRRYKFNLYGMWGRKRVGPVSTDAVTDASELEREPPSQPRLGDL…
SIO_010081: LOC116500210
subclass of: SO_0000673
so part of: LOC116500210
location: join(512882..513131,513337..513618,513730..514014,521539..521651,522456..522609,523607..524563,524640..524729,524909..525196,525951..526244,527017..527310,528723..529016,529272..529565,530540..530833,531086..531379,532616..532909,533167..533460,533714..534007,534359..534652,534906..535199,535454..535747,536980..537273,537527..537820,538173..538466,538724..539017,539768..540061,540403..540699,542532..542825,543140..543430,543772..544068,544623..544910,545743..546036,546961..547254,547607..547900,548154..548447,548660..548953,549309..549602,554345..554469,554847..554979,555144..555295,556281..556377,556558..556719,557482..557645,558116..558196)
location: region:512882-558196:1
so has part: feature:512882-513131:1:exon
so has part: feature:513337-513618:1:exon
so has part: feature:513730-514014:1:exon
so has part: feature:521539-521651:1:exon
so has part: feature:522456-522609:1:exon
so has part: feature:523607-524563:1:exon
so has part: feature:524640-524729:1:exon
so has part: feature:524909-525196:1:exon
so has part: feature:525951-526244:1:exon
so has part: feature:527017-527310:1:exon
so has part: feature:528723-529016:1:exon
so has part: feature:529272-529565:1:exon
so has part: feature:530540-530833:1:exon
so has part: feature:531086-531379:1:exon
so has part: feature:532616-532909:1:exon
so has part: feature:533167-533460:1:exon
so has part: feature:533714-534007:1:exon
so has part: feature:534359-534652:1:exon
so has part: feature:534906-535199:1:exon
so has part: feature:535454-535747:1:exon
so has part: feature:536980-537273:1:exon
so has part: feature:537527-537820:1:exon
so has part: feature:538173-538466:1:exon
so has part: feature:538724-539017:1:exon
so has part: feature:539768-540061:1:exon
so has part: feature:540403-540699:1:exon
so has part: feature:542532-542825:1:exon
so has part: feature:543140-543430:1:exon
so has part: feature:543772-544068:1:exon
so has part: feature:544623-544910:1:exon
so has part: feature:545743-546036:1:exon
so has part: feature:546961-547254:1:exon
so has part: feature:547607-547900:1:exon
so has part: feature:548154-548447:1:exon
so has part: feature:548660-548953:1:exon
so has part: feature:549309-549602:1:exon
so has part: feature:554345-554469:1:exon
so has part: feature:554847-554979:1:exon
so has part: feature:555144-555295:1:exon
so has part: feature:556281-556377:1:exon
so has part: feature:556558-556719:1:exon
so has part: feature:557482-557645:1:exon
so has part: feature:558116-558196:1:exon

XP_032061015.1
type: Protein
SIO_000068: ncbiprotein

position:558196:1
position: 558196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512882-513131:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:513337-513618:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:513730-514014:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:521539-521651:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:522456-522609:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:523607-524563:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:524640-524729:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:524909-525196:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:525951-526244:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:527017-527310:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:528723-529016:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:529272-529565:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:530540-530833:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:531086-531379:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:532616-532909:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:533167-533460:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:533714-534007:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:534359-534652:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:534906-535199:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:535454-535747:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:536980-537273:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:537527-537820:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:538173-538466:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:538724-539017:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:539768-540061:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:540403-540699:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:542532-542825:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:543140-543430:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:543772-544068:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:544623-544910:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:545743-546036:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:546961-547254:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:547607-547900:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:548154-548447:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:548660-548953:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:549309-549602:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:554345-554469:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:554847-554979:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:555144-555295:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:556281-556377:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:556558-556719:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:557482-557645:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:558116-558196:1:exon

CENPA
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: CENPA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(563770..566070)
location: region:563770-566070:-1
so has part: feature:563770-566070:-1:exon
subclass of: SO_0000010

116500212
type: Gene
SIO_000068: ncbigene

position:563770:-1
position: 563770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566070:-1
position: 566070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:563770-566070:-1:exon

CENPA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: CENPA
product: centromere protein A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205125.1
SIO_010081: CENPA
subclass of: SO_0000673
so part of: CENPA
location: complement(join(563770..563904,564330..564407,565776..565876,565971..566070))
location: region:563770-566070:-1
so has part: feature:565971-566070:-1:exon
so has part: feature:565776-565876:-1:exon
so has part: feature:564330-564407:-1:exon
so has part: feature:563770-563904:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:565971-566070:-1:exon

position:565971:-1
position: 565971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:565776-565876:-1:exon

position:565776:-1
position: 565776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565876:-1
position: 565876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:564330-564407:-1:exon

position:564330:-1
position: 564330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564407:-1
position: 564407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:563770-563904:-1:exon

position:563904:-1
position: 563904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CENPA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: CENPA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H3-like centromeric protein A
translation: MPRPKDRAPRRRGSPPVSPRRSPRRPRAPSPPRRRRRYRPGQLALREIRKYQSTTNLLLRRQPFCRVVREICLLFTRGVDYQWQAMALLALQEAAEAFLVRLLEDAYLCSLHARRVTLYPKDLQLARRLRGLDGGGI
SIO_010081: CENPA
subclass of: SO_0000673
so part of: CENPA
location: complement(join(563770..563904,564330..564407,565776..565876,565971..566070))
location: region:563770-566070:-1
so has part: feature:565971-566070:-1:exon
so has part: feature:565776-565876:-1:exon
so has part: feature:564330-564407:-1:exon
so has part: feature:563770-563904:-1:exon

XP_032061016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:565971-566070:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:565776-565876:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:564330-564407:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:563770-563904:-1:exon

LOC116500213
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500213
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(586975..606251)
location: region:586975-606251:-1
so has part: feature:586975-606251:-1:exon
subclass of: SO_0000010

116500213
type: Gene
SIO_000068: ncbigene

position:586975:-1
position: 586975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606251:-1
position: 606251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:586975-606251:-1:exon

LOC116500213
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500213
product: complement C4-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_032205126.1
SIO_010081: LOC116500213
subclass of: SO_0000673
so part of: LOC116500213
location: complement(join(586975..587116,587656..587788,588398..588481,588768..588857,589268..589357,589432..589534,589779..589853,590392..590482,591293..591497,591600..591693,591772..591831,592161..592331,592806..592972,593188..593353,593767..593883,594295..594451,594528..594603,594950..595147,595839..595928,596021..596072,596417..596617,597018..597157,597517..597587,597674..597785,597921..598115,598595..598666,599130..599256,599967..600122,600504..600686,601334..601519,601872..602042,602367..602479,602672..602795,602963..603071,603584..603680,603789..603871,604496..604584,604805..604875,605451..605637,605906..606251))
location: region:586975-606251:-1
so has part: feature:605906-606251:-1:exon
so has part: feature:605451-605637:-1:exon
so has part: feature:604805-604875:-1:exon
so has part: feature:604496-604584:-1:exon
so has part: feature:603789-603871:-1:exon
so has part: feature:603584-603680:-1:exon
so has part: feature:602963-603071:-1:exon
so has part: feature:602672-602795:-1:exon
so has part: feature:602367-602479:-1:exon
so has part: feature:601872-602042:-1:exon
so has part: feature:601334-601519:-1:exon
so has part: feature:600504-600686:-1:exon
so has part: feature:599967-600122:-1:exon
so has part: feature:599130-599256:-1:exon
so has part: feature:598595-598666:-1:exon
so has part: feature:597921-598115:-1:exon
so has part: feature:597674-597785:-1:exon
so has part: feature:597517-597587:-1:exon
so has part: feature:597018-597157:-1:exon
so has part: feature:596417-596617:-1:exon
so has part: feature:596021-596072:-1:exon
so has part: feature:595839-595928:-1:exon
so has part: feature:594950-595147:-1:exon
so has part: feature:594528-594603:-1:exon
so has part: feature:594295-594451:-1:exon
so has part: feature:593767-593883:-1:exon
so has part: feature:593188-593353:-1:exon
so has part: feature:592806-592972:-1:exon
so has part: feature:592161-592331:-1:exon
so has part: feature:591772-591831:-1:exon
so has part: feature:591600-591693:-1:exon
so has part: feature:591293-591497:-1:exon
so has part: feature:590392-590482:-1:exon
so has part: feature:589779-589853:-1:exon
so has part: feature:589432-589534:-1:exon
so has part: feature:589268-589357:-1:exon
so has part: feature:588768-588857:-1:exon
so has part: feature:588398-588481:-1:exon
so has part: feature:587656-587788:-1:exon
so has part: feature:586975-587116:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:605906-606251:-1:exon

position:605906:-1
position: 605906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:605451-605637:-1:exon

position:605451:-1
position: 605451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605637:-1
position: 605637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:604805-604875:-1:exon

position:604805:-1
position: 604805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604875:-1
position: 604875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:604496-604584:-1:exon

position:604496:-1
position: 604496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604584:-1
position: 604584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:603789-603871:-1:exon

position:603789:-1
position: 603789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603871:-1
position: 603871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:603584-603680:-1:exon

position:603584:-1
position: 603584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603680:-1
position: 603680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:602963-603071:-1:exon

position:602963:-1
position: 602963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603071:-1
position: 603071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:602672-602795:-1:exon

position:602672:-1
position: 602672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602795:-1
position: 602795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:602367-602479:-1:exon

position:602367:-1
position: 602367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602479:-1
position: 602479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:601872-602042:-1:exon

position:601872:-1
position: 601872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602042:-1
position: 602042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:601334-601519:-1:exon

position:601334:-1
position: 601334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601519:-1
position: 601519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:600504-600686:-1:exon

position:600504:-1
position: 600504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600686:-1
position: 600686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:599967-600122:-1:exon

position:599967:-1
position: 599967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600122:-1
position: 600122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:599130-599256:-1:exon

position:599130:-1
position: 599130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599256:-1
position: 599256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:598595-598666:-1:exon

position:598595:-1
position: 598595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598666:-1
position: 598666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:597921-598115:-1:exon

position:597921:-1
position: 597921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598115:-1
position: 598115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:597674-597785:-1:exon

position:597674:-1
position: 597674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597785:-1
position: 597785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:597517-597587:-1:exon

position:597517:-1
position: 597517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597587:-1
position: 597587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:597018-597157:-1:exon

position:597018:-1
position: 597018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597157:-1
position: 597157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:596417-596617:-1:exon

position:596417:-1
position: 596417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596617:-1
position: 596617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:596021-596072:-1:exon

position:596021:-1
position: 596021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596072:-1
position: 596072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:595839-595928:-1:exon

position:595839:-1
position: 595839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595928:-1
position: 595928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:594950-595147:-1:exon

position:594950:-1
position: 594950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595147:-1
position: 595147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:594528-594603:-1:exon

position:594528:-1
position: 594528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594603:-1
position: 594603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:594295-594451:-1:exon

position:594295:-1
position: 594295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594451:-1
position: 594451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:593767-593883:-1:exon

position:593767:-1
position: 593767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593883:-1
position: 593883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:593188-593353:-1:exon

position:593188:-1
position: 593188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593353:-1
position: 593353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:592806-592972:-1:exon

position:592806:-1
position: 592806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592972:-1
position: 592972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:592161-592331:-1:exon

position:592161:-1
position: 592161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592331:-1
position: 592331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:591772-591831:-1:exon

position:591772:-1
position: 591772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591831:-1
position: 591831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:591600-591693:-1:exon

position:591600:-1
position: 591600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591693:-1
position: 591693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:591293-591497:-1:exon

position:591293:-1
position: 591293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591497:-1
position: 591497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:590392-590482:-1:exon

position:590392:-1
position: 590392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590482:-1
position: 590482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:589779-589853:-1:exon

position:589779:-1
position: 589779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589853:-1
position: 589853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:589432-589534:-1:exon

position:589432:-1
position: 589432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589534:-1
position: 589534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:589268-589357:-1:exon

position:589268:-1
position: 589268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589357:-1
position: 589357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:588768-588857:-1:exon

position:588768:-1
position: 588768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588857:-1
position: 588857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:588398-588481:-1:exon

position:588398:-1
position: 588398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588481:-1
position: 588481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:587656-587788:-1:exon

position:587656:-1
position: 587656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587788:-1
position: 587788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:586975-587116:-1:exon

position:587116:-1
position: 587116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500213
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500213
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: complement C4-like
translation: MGSGRGYGPLWGLWHQGAYGVYEGLWDTCGTGEAKKQLWGWWQPWVRQWSPRLVLVAPRRAALGTPLGLLVAAVGPVTGTVTAWPEGSRGAGPCAPPTAFSLTSHNDFNQLLHIEVTLAQAERCGVLRAARGRVLLLEARSAQLPPPGTRLVRVALGGSRGHLIIQTDKPLYAPRQTVRFRVFSMDPELQPNPEPILVTITNPLGARVREGQRVPLDTVLSDQLVLPDIALPGTWHVRAQLAASPDTNGSAAFEVRKYALPGFEVRIRPEPRFVVLSKPELAPLRVHLHVQFPDGAPVGGHAQLRVGLLNAGGRGGQFLRGLEQQSRVTEGHASLDVSLLAMARALGVALPDLQGARLRLAVAVVEAQGGELVEQEATVALVASPWALDLAETPRFFVPGAPFTLLGRVLHAGGEPAPGIGVRVTVGVTGATSPPPIEFRADTTGAIVIPINVPSGATALDLSVEAGQADGPPAQAQMTVAPVEAVSGRFLLLGGPGGPLQPGEVLRLQLRDLGPPPAPRLFHVLAVARGRLVAAQAMQRGTVTEVTLPVTPAMVPRLRVVAFFQAGGQLVAGSWGAPVVDSCGDQVRVVVPSPGRDLRPQASLTVTVTTGTPTTVALGAIDTAVLALEPRHRLGPTKVKAVLGSSDLGCNPGGGPNVAGIFRAAGLVLGMGGATPPLGPGPGCPPSPPRQRRSLELLQLLEEKAGQWRGDPATWRCCRDGATALPVRATCDQRGQRVTTAGGCRDAFLHCCALARDLRRRGQPGGLARVLEAALEQQLLDDEEVPTRSFFPESWLWRRVPVDGSVRMSVLLPDSITTWEIQAVAIIPGVGLCVAVPQRVTVTQDVRVALRLPPSARPREQLQLQPLIHSRLPHSINVTVTLSVAEGICAALDGAPQDLELPPGGAIAVPLTLVALRPGDVPITITARGPWGLSDRVTHILHVEPEGELHLEETSYVLDTNNKQGRTLELPGDVPAEIVPDGDFSMSIRVTGRVPGWALQGALGVKGTLLRAPRGCGEQSLMVLAPAAATLRYLDESEGWAQLPAGHRERGLSTLQRGFERVQSFRKSDGSYGAWLHRGSSTWLTALVLRVMALSRPYLPVDADGPSESLRWLLGQQRPDGAFVEHEPVIHREMQGGVGDPGPEATVSLTAFVVVALHSTRVLLPPDSPEQQLLDKALSQASTFLRGHVETLGTFGTAITAYALALVDTSPPGPQPAVERLRRLARTAHGGRAQFWPAGGPAATVEATAYGLLALLQSHDVAGASRAAQWLREQSNYGGGFHSTQDTLVALEALAQMWLQWGRGARSGLNLGLSWPGGIRGGPGGTQVTLEPGLEPLEQELRVPLGSPVTVKVEGHGEGTLTVLRQFRLMSPPNATCQGLGLEVAITGPIIYQDEEDYEDYEEEEELEGRAEPPEGVGPAGGAGLAEAAPPLSPMALWDARQRQRRDVRDPGREVAFLVCFWRGPGAGLAGMAVVEVSLLSGFRPHRPDLDKLRDVVDRWISHYELDGARLVLYLDEVPPQRQCLSFGATQDVAVGQLQPAMAVIYDYYEPARRCTVFYSAPRRSSAVATLCSPKVCECAQGGCPRAQRGTEELTADDRLDFACYSPRVDYAMVVQVLTQNEVGAFVGFETEIQEVLLMGQDTAAAPGERRRILVRESCTLRLRSPNTYLVMGLDGGTRDPQGRPQYLLSPQSWVEEVPSPARCGATRLRRRCAQLQDFRNRLGQLGCQL
SIO_010081: LOC116500213
subclass of: SO_0000673
so part of: LOC116500213
location: complement(join(586975..587116,587656..587788,588398..588481,588768..588857,589268..589357,589432..589534,589779..589853,590392..590482,591293..591497,591600..591693,591772..591831,592161..592331,592806..592972,593188..593353,593767..593883,594295..594451,594528..594603,594950..595147,595839..595928,596021..596072,596417..596617,597018..597157,597517..597587,597674..597785,597921..598115,598595..598666,599130..599256,599967..600122,600504..600686,601334..601519,601872..602042,602367..602479,602672..602795,602963..603071,603584..603680,603789..603871,604496..604584,604805..604875,605451..605637,605906..606251))
location: region:586975-606251:-1
so has part: feature:605906-606251:-1:exon
so has part: feature:605451-605637:-1:exon
so has part: feature:604805-604875:-1:exon
so has part: feature:604496-604584:-1:exon
so has part: feature:603789-603871:-1:exon
so has part: feature:603584-603680:-1:exon
so has part: feature:602963-603071:-1:exon
so has part: feature:602672-602795:-1:exon
so has part: feature:602367-602479:-1:exon
so has part: feature:601872-602042:-1:exon
so has part: feature:601334-601519:-1:exon
so has part: feature:600504-600686:-1:exon
so has part: feature:599967-600122:-1:exon
so has part: feature:599130-599256:-1:exon
so has part: feature:598595-598666:-1:exon
so has part: feature:597921-598115:-1:exon
so has part: feature:597674-597785:-1:exon
so has part: feature:597517-597587:-1:exon
so has part: feature:597018-597157:-1:exon
so has part: feature:596417-596617:-1:exon
so has part: feature:596021-596072:-1:exon
so has part: feature:595839-595928:-1:exon
so has part: feature:594950-595147:-1:exon
so has part: feature:594528-594603:-1:exon
so has part: feature:594295-594451:-1:exon
so has part: feature:593767-593883:-1:exon
so has part: feature:593188-593353:-1:exon
so has part: feature:592806-592972:-1:exon
so has part: feature:592161-592331:-1:exon
so has part: feature:591772-591831:-1:exon
so has part: feature:591600-591693:-1:exon
so has part: feature:591293-591497:-1:exon
so has part: feature:590392-590482:-1:exon
so has part: feature:589779-589853:-1:exon
so has part: feature:589432-589534:-1:exon
so has part: feature:589268-589357:-1:exon
so has part: feature:588768-588857:-1:exon
so has part: feature:588398-588481:-1:exon
so has part: feature:587656-587788:-1:exon
so has part: feature:586975-587116:-1:exon

XP_032061017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:605906-606251:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:605451-605637:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:604805-604875:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:604496-604584:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:603789-603871:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:603584-603680:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:602963-603071:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:602672-602795:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:602367-602479:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:601872-602042:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:601334-601519:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:600504-600686:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:599967-600122:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:599130-599256:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:598595-598666:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:597921-598115:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:597674-597785:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:597517-597587:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:597018-597157:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:596417-596617:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:596021-596072:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:595839-595928:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:594950-595147:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:594528-594603:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:594295-594451:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:593767-593883:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:593188-593353:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:592806-592972:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:592161-592331:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:591772-591831:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:591600-591693:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:591293-591497:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:590392-590482:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:589779-589853:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:589432-589534:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:589268-589357:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:588768-588857:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:588398-588481:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:587656-587788:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:586975-587116:-1:exon

LOC116500261
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500261
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 609972..615764
location: region:609972-615764:1
so has part: feature:609972-615764:1:exon
subclass of: SO_0000010

116500261
type: Gene
SIO_000068: ncbigene

position:609972:1
position: 609972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615764:1
position: 615764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609972-615764:1:exon

LOC116500261
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500261
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 319 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032205201.1
SIO_010081: LOC116500261
subclass of: SO_0000673
so part of: LOC116500261
location: join(609972..610096,610225..610488,611154..611429,611524..611634,613986..614147,614230..614316,614476..614508,614681..614713,614914..615764)
location: region:609972-615764:1
so has part: feature:609972-610096:1:exon
so has part: feature:610225-610488:1:exon
so has part: feature:611154-611429:1:exon
so has part: feature:611524-611634:1:exon
so has part: feature:613986-614147:1:exon
so has part: feature:614230-614316:1:exon
so has part: feature:614476-614508:1:exon
so has part: feature:614681-614713:1:exon
so has part: feature:614914-615764:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:609972-610096:1:exon

position:610096:1
position: 610096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:610225-610488:1:exon

position:610225:1
position: 610225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:610488:1
position: 610488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:611154-611429:1:exon

position:611154:1
position: 611154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611429:1
position: 611429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:611524-611634:1:exon

position:611524:1
position: 611524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611634:1
position: 611634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:613986-614147:1:exon

position:613986:1
position: 613986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614147:1
position: 614147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:614230-614316:1:exon

position:614230:1
position: 614230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614316:1
position: 614316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:614476-614508:1:exon

position:614476:1
position: 614476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614508:1
position: 614508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:614681-614713:1:exon

position:614681:1
position: 614681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614713:1
position: 614713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:614914-615764:1:exon

position:614914:1
position: 614914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500261
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500261
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 319 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032205203.1
SIO_010081: LOC116500261
subclass of: SO_0000673
so part of: LOC116500261
location: join(609972..610096,610225..610488,611154..611429,611524..611634,613986..614147,614230..614316,614476..614508,614914..615764)
location: region:609972-615764:1
so has part: feature:609972-610096:1:exon
so has part: feature:610225-610488:1:exon
so has part: feature:611154-611429:1:exon
so has part: feature:611524-611634:1:exon
so has part: feature:613986-614147:1:exon
so has part: feature:614230-614316:1:exon
so has part: feature:614476-614508:1:exon
so has part: feature:614914-615764:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:609972-610096:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:610225-610488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611154-611429:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:611524-611634:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:613986-614147:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:614230-614316:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:614476-614508:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:614914-615764:1:exon

LOC116500261
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500261
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032205202.1
SIO_010081: LOC116500261
subclass of: SO_0000673
so part of: LOC116500261
location: join(609972..610096,610225..610488,611154..611429,613875..614147,614230..614316,614476..614508,614681..614713,614914..615764)
location: region:609972-615764:1
so has part: feature:609972-610096:1:exon
so has part: feature:610225-610488:1:exon
so has part: feature:611154-611429:1:exon
so has part: feature:613875-614147:1:exon
so has part: feature:614230-614316:1:exon
so has part: feature:614476-614508:1:exon
so has part: feature:614681-614713:1:exon
so has part: feature:614914-615764:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:609972-610096:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:610225-610488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611154-611429:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:613875-614147:1:exon

position:613875:1
position: 613875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:614230-614316:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:614476-614508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:614681-614713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:614914-615764:1:exon

LOC116500261
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500261
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X1
translation: MASSSGGSSGHSGAMGPGRAGALGLVLGLLLGVLGGAASEPHSLRYFSTAVSDPSPGVPQFVTVGSVDGEIFVRYDSETRKKEPRVDWIAANTDQQYWDRETEISRRNEQVSRRHLETLRERYNQSRGSHTLQRMYGCDLLEDGSIRGFDQHGYDGRDFIAFDKDTLTYTAADAGAQITKRKWEEDGTVAERRKYYLENTCIEWLRKYVSYGKDVLERRERPEVRVSGMEANKILTLSCRAHGFYPRPISISWLKDGVVQEQETQRGSTVPNSDGTYHAWATIDVLPGDWDKYQCRVKHASLPQPGLFSWEPQSNLIPIVVGVAVAVVAVITALAGFAVWKKGNGYNMATGSLGGSNRSTTGSNPSV
SIO_010081: LOC116500261
subclass of: SO_0000673
so part of: LOC116500261
location: join(609979..610096,610225..610488,611154..611429,611524..611634,613986..614147,614230..614316,614476..614508,614681..614713,614914..614933)
location: region:609979-614933:1
so has part: feature:609979-610096:1:exon
so has part: feature:610225-610488:1:exon
so has part: feature:611154-611429:1:exon
so has part: feature:611524-611634:1:exon
so has part: feature:613986-614147:1:exon
so has part: feature:614230-614316:1:exon
so has part: feature:614476-614508:1:exon
so has part: feature:614681-614713:1:exon
so has part: feature:614914-614933:1:exon

XP_032061092.1
type: Protein
SIO_000068: ncbiprotein

position:609979:1
position: 609979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614933:1
position: 614933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609979-610096:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:610225-610488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611154-611429:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:611524-611634:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:613986-614147:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:614230-614316:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:614476-614508:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:614681-614713:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:614914-614933:1:exon

LOC116500261
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500261
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X3
translation: MASSSGGSSGHSGAMGPGRAGALGLVLGLLLGVLGGAASEPHSLRYFSTAVSDPSPGVPQFVTVGSVDGEIFVRYDSETRKKEPRVDWIAANTDQQYWDRETEISRRNEQVSRRHLETLRERYNQSRGSHTLQRMYGCDLLEDGSIRGFDQHGYDGRDFIAFDKDTLTYTAADAGAQITKRKWEEDGTVAERRKYYLENTCIEWLRKYVSYGKDVLERRERPEVRVSGMEANKILTLSCRAHGFYPRPISISWLKDGVVQEQETQRGSTVPNSDGTYHAWATIDVLPGDWDKYQCRVKHASLPQPGLFSWEPQSNLIPIVVGVAVAVVAVITALAGFAVWKKGNGYNMATGSNPSV
SIO_010081: LOC116500261
subclass of: SO_0000673
so part of: LOC116500261
location: join(609979..610096,610225..610488,611154..611429,611524..611634,613986..614147,614230..614316,614476..614508,614914..614933)
location: region:609979-614933:1
so has part: feature:609979-610096:1:exon
so has part: feature:610225-610488:1:exon
so has part: feature:611154-611429:1:exon
so has part: feature:611524-611634:1:exon
so has part: feature:613986-614147:1:exon
so has part: feature:614230-614316:1:exon
so has part: feature:614476-614508:1:exon
so has part: feature:614914-614933:1:exon

XP_032061094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:609979-610096:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:610225-610488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611154-611429:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:611524-611634:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:613986-614147:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:614230-614316:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:614476-614508:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:614914-614933:1:exon

LOC116500261
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500261
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X2
translation: MASSSGGSSGHSGAMGPGRAGALGLVLGLLLGVLGGAASEPHSLRYFSTAVSDPSPGVPQFVTVGSVDGEIFVRYDSETRKKEPRVDWIAANTDQQYWDRETEISRRNEQVSRRHLETLRERYNQSRGSHTLQRMYGCDLLEDGSIRGFDQHGYDGRDFIAFDKDTLTYTAADAGAQITKRKWEEDGTVAERRKYYLENTCIEWLRKYVSYGKDVLERRERPEIRVSGMEADKILTLSCRAHGFYPRPISISWLKDGVVQEQETQRGSTVPNSDGTYHAWATIDVLPGDWDKYQCRVKHASLPQPGLFSWEPQSNLIPIVVGVAVAVVAVITALAGFAVWKKGNGYNMATGSLGGSNRSTTGSNPSV
SIO_010081: LOC116500261
subclass of: SO_0000673
so part of: LOC116500261
location: join(609979..610096,610225..610488,611154..611429,613875..614147,614230..614316,614476..614508,614681..614713,614914..614933)
location: region:609979-614933:1
so has part: feature:609979-610096:1:exon
so has part: feature:610225-610488:1:exon
so has part: feature:611154-611429:1:exon
so has part: feature:613875-614147:1:exon
so has part: feature:614230-614316:1:exon
so has part: feature:614476-614508:1:exon
so has part: feature:614681-614713:1:exon
so has part: feature:614914-614933:1:exon

XP_032061093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:609979-610096:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:610225-610488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611154-611429:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:613875-614147:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:614230-614316:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:614476-614508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:614681-614713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:614914-614933:1:exon

LOC116500245
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 619915..671730
location: region:619915-671730:1
so has part: feature:619915-671730:1:exon
subclass of: SO_0000010

116500245
type: Gene
SIO_000068: ncbigene

position:619915:1
position: 619915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671730:1
position: 671730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:619915-671730:1:exon

LOC116500245
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500245
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205163.1
SIO_010081: LOC116500245
subclass of: SO_0000673
so part of: LOC116500245
location: join(619915..620069,623110..623373,624041..624316,625489..625752,626408..626601,639647..639728,642766..642896,658819..658951,659607..659882,659977..660249,660334..660435,671153..671185,671295..671327,671523..671730)
location: region:619915-671730:1
so has part: feature:619915-620069:1:exon
so has part: feature:623110-623373:1:exon
so has part: feature:624041-624316:1:exon
so has part: feature:625489-625752:1:exon
so has part: feature:626408-626601:1:exon
so has part: feature:639647-639728:1:exon
so has part: feature:642766-642896:1:exon
so has part: feature:658819-658951:1:exon
so has part: feature:659607-659882:1:exon
so has part: feature:659977-660249:1:exon
so has part: feature:660334-660435:1:exon
so has part: feature:671153-671185:1:exon
so has part: feature:671295-671327:1:exon
so has part: feature:671523-671730:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:619915-620069:1:exon

position:620069:1
position: 620069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:623110-623373:1:exon

position:623110:1
position: 623110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623373:1
position: 623373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:624041-624316:1:exon

position:624041:1
position: 624041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624316:1
position: 624316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:625489-625752:1:exon

position:625489:1
position: 625489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625752:1
position: 625752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:626408-626601:1:exon

position:626408:1
position: 626408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:626601:1
position: 626601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:639647-639728:1:exon

position:639647:1
position: 639647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639728:1
position: 639728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:642766-642896:1:exon

position:642766:1
position: 642766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642896:1
position: 642896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:658819-658951:1:exon

position:658819:1
position: 658819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658951:1
position: 658951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:659607-659882:1:exon

position:659607:1
position: 659607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659882:1
position: 659882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:659977-660249:1:exon

position:659977:1
position: 659977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660249:1
position: 660249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:660334-660435:1:exon

position:660334:1
position: 660334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660435:1
position: 660435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:671153-671185:1:exon

position:671153:1
position: 671153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671185:1
position: 671185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:671295-671327:1:exon

position:671295:1
position: 671295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671327:1
position: 671327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:671523-671730:1:exon

position:671523:1
position: 671523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500245
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500245
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 74 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032205164.1
SIO_010081: LOC116500245
subclass of: SO_0000673
so part of: LOC116500245
location: join(619915..620069,623110..623373,624041..624316,625489..625752,626408..626601,639647..639728,642766..642896,658819..658951,664863..665138,665233..665505,670907..671008,671153..671185,671295..671327,671523..671730)
location: region:619915-671730:1
so has part: feature:619915-620069:1:exon
so has part: feature:623110-623373:1:exon
so has part: feature:624041-624316:1:exon
so has part: feature:625489-625752:1:exon
so has part: feature:626408-626601:1:exon
so has part: feature:639647-639728:1:exon
so has part: feature:642766-642896:1:exon
so has part: feature:658819-658951:1:exon
so has part: feature:664863-665138:1:exon
so has part: feature:665233-665505:1:exon
so has part: feature:670907-671008:1:exon
so has part: feature:671153-671185:1:exon
so has part: feature:671295-671327:1:exon
so has part: feature:671523-671730:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:619915-620069:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623110-623373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:624041-624316:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:625489-625752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:626408-626601:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:639647-639728:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:642766-642896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:658819-658951:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:664863-665138:1:exon

position:664863:1
position: 664863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665138:1
position: 665138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:665233-665505:1:exon

position:665233:1
position: 665233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665505:1
position: 665505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:670907-671008:1:exon

position:670907:1
position: 670907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671008:1
position: 671008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:671153-671185:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:671295-671327:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:671523-671730:1:exon

LOC116500245
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500245
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 69 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032205162.1
SIO_010081: LOC116500245
subclass of: SO_0000673
so part of: LOC116500245
location: join(619915..620069,623110..623373,624041..624316,625489..625752,626408..626601,639647..639728,642766..642896,658819..658951,664863..665138,670551..670823,670907..671008,671153..671185,671295..671327,671523..671730)
location: region:619915-671730:1
so has part: feature:619915-620069:1:exon
so has part: feature:623110-623373:1:exon
so has part: feature:624041-624316:1:exon
so has part: feature:625489-625752:1:exon
so has part: feature:626408-626601:1:exon
so has part: feature:639647-639728:1:exon
so has part: feature:642766-642896:1:exon
so has part: feature:658819-658951:1:exon
so has part: feature:664863-665138:1:exon
so has part: feature:670551-670823:1:exon
so has part: feature:670907-671008:1:exon
so has part: feature:671153-671185:1:exon
so has part: feature:671295-671327:1:exon
so has part: feature:671523-671730:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:619915-620069:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623110-623373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:624041-624316:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:625489-625752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:626408-626601:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:639647-639728:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:642766-642896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:658819-658951:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:664863-665138:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:670551-670823:1:exon

position:670551:1
position: 670551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670823:1
position: 670823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:670907-671008:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:671153-671185:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:671295-671327:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:671523-671730:1:exon

LOC116500245
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500245
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 76 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032205165.1
SIO_010081: LOC116500245
subclass of: SO_0000673
so part of: LOC116500245
location: join(619915..620069,623110..623373,624041..624316,625489..625752,626408..626601,639647..639728,642766..642896,658819..658951,670181..670456,670551..670823,670907..671008,671153..671185,671295..671327,671523..671730)
location: region:619915-671730:1
so has part: feature:619915-620069:1:exon
so has part: feature:623110-623373:1:exon
so has part: feature:624041-624316:1:exon
so has part: feature:625489-625752:1:exon
so has part: feature:626408-626601:1:exon
so has part: feature:639647-639728:1:exon
so has part: feature:642766-642896:1:exon
so has part: feature:658819-658951:1:exon
so has part: feature:670181-670456:1:exon
so has part: feature:670551-670823:1:exon
so has part: feature:670907-671008:1:exon
so has part: feature:671153-671185:1:exon
so has part: feature:671295-671327:1:exon
so has part: feature:671523-671730:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:619915-620069:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623110-623373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:624041-624316:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:625489-625752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:626408-626601:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:639647-639728:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:642766-642896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:658819-658951:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:670181-670456:1:exon

position:670181:1
position: 670181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670456:1
position: 670456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:670551-670823:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:670907-671008:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:671153-671185:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:671295-671327:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:671523-671730:1:exon

LOC116500245
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500245
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 70 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032205169.1
SIO_010081: LOC116500245
subclass of: SO_0000673
so part of: LOC116500245
location: join(619915..620069,623110..623373,624041..624316,625489..625752,649065..649340,649435..649707,649790..649876,650036..650068,671295..671327,671523..671730)
location: region:619915-671730:1
so has part: feature:619915-620069:1:exon
so has part: feature:623110-623373:1:exon
so has part: feature:624041-624316:1:exon
so has part: feature:625489-625752:1:exon
so has part: feature:649065-649340:1:exon
so has part: feature:649435-649707:1:exon
so has part: feature:649790-649876:1:exon
so has part: feature:650036-650068:1:exon
so has part: feature:671295-671327:1:exon
so has part: feature:671523-671730:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:619915-620069:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623110-623373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:624041-624316:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:625489-625752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649065-649340:1:exon

position:649065:1
position: 649065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649340:1
position: 649340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:649435-649707:1:exon

position:649435:1
position: 649435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649707:1
position: 649707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:649790-649876:1:exon

position:649790:1
position: 649790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649876:1
position: 649876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:650036-650068:1:exon

position:650036:1
position: 650036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650068:1
position: 650068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:671295-671327:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:671523-671730:1:exon

LOC116500245
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500245
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032205168.1
SIO_010081: LOC116500245
subclass of: SO_0000673
so part of: LOC116500245
location: join(619915..620069,623110..623373,624041..624316,625489..625752,649065..649340,649435..649707,649790..649891,650036..650068,650241..650273,655637..655691)
location: region:619915-655691:1
so has part: feature:619915-620069:1:exon
so has part: feature:623110-623373:1:exon
so has part: feature:624041-624316:1:exon
so has part: feature:625489-625752:1:exon
so has part: feature:649065-649340:1:exon
so has part: feature:649435-649707:1:exon
so has part: feature:649790-649891:1:exon
so has part: feature:650036-650068:1:exon
so has part: feature:650241-650273:1:exon
so has part: feature:655637-655691:1:exon

position:655691:1
position: 655691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:619915-620069:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623110-623373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:624041-624316:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:625489-625752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649065-649340:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:649435-649707:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:649790-649891:1:exon

position:649891:1
position: 649891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:650036-650068:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:650241-650273:1:exon

position:650241:1
position: 650241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650273:1
position: 650273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:655637-655691:1:exon

position:655637:1
position: 655637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500245
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500245
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032205167.1
SIO_010081: LOC116500245
subclass of: SO_0000673
so part of: LOC116500245
location: join(619915..620069,623110..623373,624041..624316,625489..625752,649065..649340,649435..649707,649790..649891,650036..650068,650241..650273,650469..650587)
location: region:619915-650587:1
so has part: feature:619915-620069:1:exon
so has part: feature:623110-623373:1:exon
so has part: feature:624041-624316:1:exon
so has part: feature:625489-625752:1:exon
so has part: feature:649065-649340:1:exon
so has part: feature:649435-649707:1:exon
so has part: feature:649790-649891:1:exon
so has part: feature:650036-650068:1:exon
so has part: feature:650241-650273:1:exon
so has part: feature:650469-650587:1:exon

position:650587:1
position: 650587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:619915-620069:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623110-623373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:624041-624316:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:625489-625752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649065-649340:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:649435-649707:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:649790-649891:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:650036-650068:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:650241-650273:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:650469-650587:1:exon

position:650469:1
position: 650469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116500245 isoform X2
translation: MKYYLENTCIEWLRKYVSYGKDVLERREPHSLRYFYTGVSDPSPGVPQFMSVGYVDGHLLDHYDSETQRDEPGADWFAANTDQQYWDRETETLRGAEQIFRVGLNTLRERYNQSRGSHTVQVMFGCDLLEDGSTRGFRQDAYEGRDFIAFDKDTLTFTAADAGAQITKRKWEQEGTVAEGWKQYLENTCIEWLRKYVSYGKDVLERREPHSLRYFYTAVSDPNPGVPQFVAMGSVDGEVFVYYDSETRRKEPRVDWIAANTDQQYWDRETEISQGNEKFFRVNLDTLQERYNQSSGSQTVQHMFGCDLLEDGSIRGFNQYGYEGRDFIALDKDALTFTAADAAALITKRKWEQEGTVAEQMKYYLENTCIEWLRKYVSYGKDVLERREPHSLRYFYAGLSDPSPGVPQFVAVGYVDGEVFVRYDSETRRTNPRVDWIAANTDQQYWDRETDISQSNEKFFRVNLDTLQERYNQSSGSHTVQHMFGCDLLEDGSIRGFDQYGYEGRDFIALDKDALTFTAADAAALITKRKWEQEGTVAEQMKYYLENTCIEWLRKYMSYGKDVLERRERPEVRVSGMETDKILTLSCRAHGFYPRPISISWLKDGVVQEQETQRGSIVPNSDGTYHAWATIDVMPGDWDKYQCRVEHASLPQPGLFSWEPQSNLIPIVVRVAVAVMAVIAALAGFAVWKSKKGKKEKGYNVAPGSDGGSNSSNAGSNPSV
SIO_010081: LOC116500245
subclass of: SO_0000673
so part of: LOC116500245
location: join(619988..620069,623110..623373,624041..624316,625489..625752,626408..626601,639647..639728,642766..642896,658819..658951,659607..659882,659977..660249,660334..660435,671153..671185,671295..671327,671523..671542)
location: region:619988-671542:1
so has part: feature:619988-620069:1:exon
so has part: feature:623110-623373:1:exon
so has part: feature:624041-624316:1:exon
so has part: feature:625489-625752:1:exon
so has part: feature:626408-626601:1:exon
so has part: feature:639647-639728:1:exon
so has part: feature:642766-642896:1:exon
so has part: feature:658819-658951:1:exon
so has part: feature:659607-659882:1:exon
so has part: feature:659977-660249:1:exon
so has part: feature:660334-660435:1:exon
so has part: feature:671153-671185:1:exon
so has part: feature:671295-671327:1:exon
so has part: feature:671523-671542:1:exon

XP_032061054.1
type: Protein
SIO_000068: ncbiprotein

position:619988:1
position: 619988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671542:1
position: 671542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:619988-620069:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623110-623373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:624041-624316:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:625489-625752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:626408-626601:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:639647-639728:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:642766-642896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:658819-658951:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:659607-659882:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:659977-660249:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:660334-660435:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:671153-671185:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:671295-671327:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:671523-671542:1:exon

LOC116500245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116500245 isoform X3
translation: MKYYLENTCIEWLRKYVSYGKDVLERREPHSLRYFYTGVSDPSPGVPQFMSVGYVDGHLLDHYDSETQRDEPGADWFAANTDQQYWDRETETLRGAEQIFRVGLNTLRERYNQSRGSHTVQVMFGCDLLEDGSTRGFRQDAYEGRDFIAFDKDTLTFTAADAGAQITKRKWEQEGTVAEGWKQYLENTCIEWLRKYVSYGKDVLERREPHSLRYFYTAVSDPNPGVPQFVAMGSVDGEVFVYYDSETRRKEPRVDWIAANTDQQYWDRETEISQGNEKFFRVNLDTLQERYNQSSGSQTVQHMFGCDLLEDGSIRGFNQYGYEGRDFIALDKDALTFTAADAAALITKRKWEQEGTVAEQMKYYLENTCIEWLRKYVSYGKDVLERREPHSLRYFYAGLSDPSPGVPQFVAVGYVDGEVFVRYDSETRRTNPRVDWIAANTDQQYWDRETDISQSNEKFFRVNLDTLQERYNQSSGSHTVQVMYGCDLLEDGSIRGFQQHGYDGKDFLTFDKDTLTYTAADAVAQITKRKWEEDGSFLEGRKFYLENTCIEWLRKYVSYGKAMLERRERPEIRVSGMEANKILTLSCRAHGFYPRPISISWLKDGMVLEQETKRGSTVPNSDGTYHAWATIDVLPGDRDKYQCRVEHASLPQPGLFSWEPQSNLIPIVAGVAVAVVAVIAALAGFAVWKSKQGKKEKGYNVAPGSDGGSNSSNAGSNPSV
SIO_010081: LOC116500245
subclass of: SO_0000673
so part of: LOC116500245
location: join(619988..620069,623110..623373,624041..624316,625489..625752,626408..626601,639647..639728,642766..642896,658819..658951,664863..665138,665233..665505,670907..671008,671153..671185,671295..671327,671523..671542)
location: region:619988-671542:1
so has part: feature:619988-620069:1:exon
so has part: feature:623110-623373:1:exon
so has part: feature:624041-624316:1:exon
so has part: feature:625489-625752:1:exon
so has part: feature:626408-626601:1:exon
so has part: feature:639647-639728:1:exon
so has part: feature:642766-642896:1:exon
so has part: feature:658819-658951:1:exon
so has part: feature:664863-665138:1:exon
so has part: feature:665233-665505:1:exon
so has part: feature:670907-671008:1:exon
so has part: feature:671153-671185:1:exon
so has part: feature:671295-671327:1:exon
so has part: feature:671523-671542:1:exon

XP_032061055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:619988-620069:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623110-623373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:624041-624316:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:625489-625752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:626408-626601:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:639647-639728:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:642766-642896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:658819-658951:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:664863-665138:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:665233-665505:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:670907-671008:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:671153-671185:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:671295-671327:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:671523-671542:1:exon

LOC116500245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116500245 isoform X1
translation: MKYYLENTCIEWLRKYVSYGKDVLERREPHSLRYFYTGVSDPSPGVPQFMSVGYVDGHLLDHYDSETQRDEPGADWFAANTDQQYWDRETETLRGAEQIFRVGLNTLRERYNQSRGSHTVQVMFGCDLLEDGSTRGFRQDAYEGRDFIAFDKDTLTFTAADAGAQITKRKWEQEGTVAEGWKQYLENTCIEWLRKYVSYGKDVLERREPHSLRYFYTAVSDPNPGVPQFVAMGSVDGEVFVYYDSETRRKEPRVDWIAANTDQQYWDRETEISQGNEKFFRVNLDTLQERYNQSSGSQTVQHMFGCDLLEDGSIRGFNQYGYEGRDFIALDKDALTFTAADAAALITKRKWEQEGTVAEQMKYYLENTCIEWLRKYVSYGKDVLERREPHSLRYFYAGLSDPSPGVPQFVAVGYVDGEVFVRYDSETRRTNPRVDWIAANTDQQYWDRETDISQSNEKFFRVNLDTLQERYNQSSGSHTVQVMYGCDLLEDGSIRGFQQHGYDGKDFLTFDKDTLTYTAADAVAQITKRKWEEDGSFLEGRKFYLENTCIEWLRKYVSYGKAMLERRERPEVRVSGMEADKILTLSCRAHGFYPRPISISWLKSGVVQEQETKRGSTVPNSDGTYHVWATIDVLPGDRDKYQCRVEHASLPQPGLFSWEPQSNLIPIVAGVAVAVVAVIAALAGFAVWKSKQGKKEKGYNVAPGSDGGSNSSNAGSNPSV
SIO_010081: LOC116500245
subclass of: SO_0000673
so part of: LOC116500245
location: join(619988..620069,623110..623373,624041..624316,625489..625752,626408..626601,639647..639728,642766..642896,658819..658951,664863..665138,670551..670823,670907..671008,671153..671185,671295..671327,671523..671542)
location: region:619988-671542:1
so has part: feature:619988-620069:1:exon
so has part: feature:623110-623373:1:exon
so has part: feature:624041-624316:1:exon
so has part: feature:625489-625752:1:exon
so has part: feature:626408-626601:1:exon
so has part: feature:639647-639728:1:exon
so has part: feature:642766-642896:1:exon
so has part: feature:658819-658951:1:exon
so has part: feature:664863-665138:1:exon
so has part: feature:670551-670823:1:exon
so has part: feature:670907-671008:1:exon
so has part: feature:671153-671185:1:exon
so has part: feature:671295-671327:1:exon
so has part: feature:671523-671542:1:exon

XP_032061053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:619988-620069:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623110-623373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:624041-624316:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:625489-625752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:626408-626601:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:639647-639728:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:642766-642896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:658819-658951:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:664863-665138:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:670551-670823:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:670907-671008:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:671153-671185:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:671295-671327:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:671523-671542:1:exon

LOC116500245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116500245 isoform X4
translation: MKYYLENTCIEWLRKYVSYGKDVLERREPHSLRYFYTGVSDPSPGVPQFMSVGYVDGHLLDHYDSETQRDEPGADWFAANTDQQYWDRETETLRGAEQIFRVGLNTLRERYNQSRGSHTVQVMFGCDLLEDGSTRGFRQDAYEGRDFIAFDKDTLTFTAADAGAQITKRKWEQEGTVAEGWKQYLENTCIEWLRKYVSYGKDVLERREPHSLRYFYTAVSDPNPGVPQFVAMGSVDGEVFVYYDSETRRKEPRVDWIAANTDQQYWDRETEISQGNEKFFRVNLDTLQERYNQSSGSQTVQHMFGCDLLEDGSIRGFNQYGYEGRDFIALDKDALTFTAADAAALITKRKWEQEGTVAEQMKYYLENTCIEWLRKYVSYGKDVLERREPHSLRYFYAGLSDPSPGVPQFVAVGYVDGEVFVRYDSETRRTNPRVDWIAANTDQQYWDRETDISQSNEKFFRVNLDTLQERYNQSSGSHTWQRMYGCDLLEDGSIRGFDQHGYEGRDFIALDKDTLTFTAADTGAQITKRKWEEEGTFAERMKNYLENTCTEWLRKYISYGKDVLERRERPEVRVSGMEADKILTLSCRAHGFYPRPISISWLKSGVVQEQETKRGSTVPNSDGTYHVWATIDVLPGDRDKYQCRVEHASLPQPGLFSWEPQSNLIPIVAGVAVAVVAVIAALAGFAVWKSKQGKKEKGYNVAPGSDGGSNSSNAGSNPSV
SIO_010081: LOC116500245
subclass of: SO_0000673
so part of: LOC116500245
location: join(619988..620069,623110..623373,624041..624316,625489..625752,626408..626601,639647..639728,642766..642896,658819..658951,670181..670456,670551..670823,670907..671008,671153..671185,671295..671327,671523..671542)
location: region:619988-671542:1
so has part: feature:619988-620069:1:exon
so has part: feature:623110-623373:1:exon
so has part: feature:624041-624316:1:exon
so has part: feature:625489-625752:1:exon
so has part: feature:626408-626601:1:exon
so has part: feature:639647-639728:1:exon
so has part: feature:642766-642896:1:exon
so has part: feature:658819-658951:1:exon
so has part: feature:670181-670456:1:exon
so has part: feature:670551-670823:1:exon
so has part: feature:670907-671008:1:exon
so has part: feature:671153-671185:1:exon
so has part: feature:671295-671327:1:exon
so has part: feature:671523-671542:1:exon

XP_032061056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:619988-620069:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623110-623373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:624041-624316:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:625489-625752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:626408-626601:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:639647-639728:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:642766-642896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:658819-658951:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:670181-670456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:670551-670823:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:670907-671008:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:671153-671185:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:671295-671327:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:671523-671542:1:exon

LOC116500245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X8
translation: MKYYLENTCIEWLRKYVSYGKDVLERREPHSLRYFYTGVSDPSPGVPQFMSVGYVDGHLLDHYDSETQRDEPGADWFAANTDQQYWDRETETLRGAEQIFRVGLNTLRERYNQSRGSHTVQVMFGCDLLEDGSTRGFRQDAYEGRDFIAFDKDTLTFTAADAGAQITKRKWEQEGTVAEGWKQYLENTCIEWLRKYVSYGKDVLERREPHSLRYFYTAVSDPNPGVPQFVAMGSVDGEVFVYYDSETRRKEPRVDWIAANTDQQYWDRETEISQGNEKFFRVNLDTLQERYNQSSGSHTVQHMFGCDLLEDGSIRGFDQYGYEGRDFIALDKDALTFTAVDAAAQITKRKWEEDGTVAERRKYYLENTCIEWLRKYMSYGKDVLERRERPEVRVSGMEVDKILTLSCRAHGFYPQPISISWLKDGMVQEQETQRGSTVPNSDGTYHAWASIDVLPGDRDKYQCRVEHASLPQPGLFSWELQSNLIPIVVGVAVAVVAVIAALAGFAVWKKGKGYNVAPGSDGGSNSSNAGSNPSV
SIO_010081: LOC116500245
subclass of: SO_0000673
so part of: LOC116500245
location: join(619988..620069,623110..623373,624041..624316,625489..625752,649065..649340,649435..649707,649790..649876,650036..650068,671295..671327,671523..671542)
location: region:619988-671542:1
so has part: feature:619988-620069:1:exon
so has part: feature:623110-623373:1:exon
so has part: feature:624041-624316:1:exon
so has part: feature:625489-625752:1:exon
so has part: feature:649065-649340:1:exon
so has part: feature:649435-649707:1:exon
so has part: feature:649790-649876:1:exon
so has part: feature:650036-650068:1:exon
so has part: feature:671295-671327:1:exon
so has part: feature:671523-671542:1:exon

XP_032061060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:619988-620069:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623110-623373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:624041-624316:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:625489-625752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649065-649340:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:649435-649707:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:649790-649876:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:650036-650068:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:671295-671327:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:671523-671542:1:exon

LOC116500245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X7
translation: MKYYLENTCIEWLRKYVSYGKDVLERREPHSLRYFYTGVSDPSPGVPQFMSVGYVDGHLLDHYDSETQRDEPGADWFAANTDQQYWDRETETLRGAEQIFRVGLNTLRERYNQSRGSHTVQVMFGCDLLEDGSTRGFRQDAYEGRDFIAFDKDTLTFTAADAGAQITKRKWEQEGTVAEGWKQYLENTCIEWLRKYVSYGKDVLERREPHSLRYFYTAVSDPNPGVPQFVAMGSVDGEVFVYYDSETRRKEPRVDWIAANTDQQYWDRETEISQGNEKFFRVNLDTLQERYNQSSGSHTVQHMFGCDLLEDGSIRGFDQYGYEGRDFIALDKDALTFTAVDAAAQITKRKWEEDGTVAERRKYYLENTCIEWLRKYMSYGKDVLERRERPEVRVSGMEVDKILTLSCRAHGFYPQPISISWLKDGMVQEQETQRGSTVPNSDGTYHAWASIDVLPGDRDKYQCRVEHASLPQPGLFSWELQSNLIPIVVGVAVAVVAVIAALAGFAVCKCKQGKKGKGYNVAPGSEGGSNKASTGSNPSV
SIO_010081: LOC116500245
subclass of: SO_0000673
so part of: LOC116500245
location: join(619988..620069,623110..623373,624041..624316,625489..625752,649065..649340,649435..649707,649790..649891,650036..650068,650241..650273,655637..655656)
location: region:619988-655656:1
so has part: feature:619988-620069:1:exon
so has part: feature:623110-623373:1:exon
so has part: feature:624041-624316:1:exon
so has part: feature:625489-625752:1:exon
so has part: feature:649065-649340:1:exon
so has part: feature:649435-649707:1:exon
so has part: feature:649790-649891:1:exon
so has part: feature:650036-650068:1:exon
so has part: feature:650241-650273:1:exon
so has part: feature:655637-655656:1:exon

XP_032061059.1
type: Protein
SIO_000068: ncbiprotein

position:655656:1
position: 655656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:619988-620069:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623110-623373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:624041-624316:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:625489-625752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649065-649340:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:649435-649707:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:649790-649891:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:650036-650068:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:650241-650273:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:655637-655656:1:exon

LOC116500245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X6
translation: MKYYLENTCIEWLRKYVSYGKDVLERREPHSLRYFYTGVSDPSPGVPQFMSVGYVDGHLLDHYDSETQRDEPGADWFAANTDQQYWDRETETLRGAEQIFRVGLNTLRERYNQSRGSHTVQVMFGCDLLEDGSTRGFRQDAYEGRDFIAFDKDTLTFTAADAGAQITKRKWEQEGTVAEGWKQYLENTCIEWLRKYVSYGKDVLERREPHSLRYFYTAVSDPNPGVPQFVAMGSVDGEVFVYYDSETRRKEPRVDWIAANTDQQYWDRETEISQGNEKFFRVNLDTLQERYNQSSGSHTVQHMFGCDLLEDGSIRGFDQYGYEGRDFIALDKDALTFTAVDAAAQITKRKWEEDGTVAERRKYYLENTCIEWLRKYMSYGKDVLERRERPEVRVSGMEVDKILTLSCRAHGFYPQPISISWLKDGMVQEQETQRGSTVPNSDGTYHAWASIDVLPGDRDKYQCRVEHASLPQPGLFSWELQSNLIPIVVGVAVAVVAVIAALAGFAVCKCKQGKKGKGYNVAPGSEGGSNKASTGSNPSV
SIO_010081: LOC116500245
subclass of: SO_0000673
so part of: LOC116500245
location: join(619988..620069,623110..623373,624041..624316,625489..625752,649065..649340,649435..649707,649790..649891,650036..650068,650241..650273,650469..650488)
location: region:619988-650488:1
so has part: feature:619988-620069:1:exon
so has part: feature:623110-623373:1:exon
so has part: feature:624041-624316:1:exon
so has part: feature:625489-625752:1:exon
so has part: feature:649065-649340:1:exon
so has part: feature:649435-649707:1:exon
so has part: feature:649790-649891:1:exon
so has part: feature:650036-650068:1:exon
so has part: feature:650241-650273:1:exon
so has part: feature:650469-650488:1:exon

XP_032061058.1
type: Protein
SIO_000068: ncbiprotein

position:650488:1
position: 650488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:619988-620069:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623110-623373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:624041-624316:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:625489-625752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649065-649340:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:649435-649707:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:649790-649891:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:650036-650068:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:650241-650273:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:650469-650488:1:exon

LOC116500245
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500245
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032205166.1
SIO_010081: LOC116500245
subclass of: SO_0000673
so part of: LOC116500245
location: join(622904..622979,623110..623373,624041..624316,625489..625752,626408..626601,639647..639728,642766..642896,658819..658951,659607..659882,670551..670823,670907..671008,671153..671185,671295..671327,671523..671730)
location: region:622904-671730:1
so has part: feature:622904-622979:1:exon
so has part: feature:623110-623373:1:exon
so has part: feature:624041-624316:1:exon
so has part: feature:625489-625752:1:exon
so has part: feature:626408-626601:1:exon
so has part: feature:639647-639728:1:exon
so has part: feature:642766-642896:1:exon
so has part: feature:658819-658951:1:exon
so has part: feature:659607-659882:1:exon
so has part: feature:670551-670823:1:exon
so has part: feature:670907-671008:1:exon
so has part: feature:671153-671185:1:exon
so has part: feature:671295-671327:1:exon
so has part: feature:671523-671730:1:exon

position:622904:1
position: 622904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622904-622979:1:exon

position:622979:1
position: 622979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:623110-623373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:624041-624316:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:625489-625752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:626408-626601:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:639647-639728:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:642766-642896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:658819-658951:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:659607-659882:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:670551-670823:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:670907-671008:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:671153-671185:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:671295-671327:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:671523-671730:1:exon

LOC116500245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116500245 isoform X5
translation: MGPGRVGALGLVLGLLLGVLGGAASEPHSLRYFYTGVSDPSPGVPQFMSVGYVDGHLLDHYDSETQRDEPGADWFAANTDQQYWDRETETLRGAEQIFRVGLNTLRERYNQSRGSHTVQVMFGCDLLEDGSTRGFRQDAYEGRDFIAFDKDTLTFTAADAGAQITKRKWEQEGTVAEGWKQYLENTCIEWLRKYVSYGKDVLERREPHSLRYFYTAVSDPNPGVPQFVAMGSVDGEVFVYYDSETRRKEPRVDWIAANTDQQYWDRETEISQGNEKFFRVNLDTLQERYNQSSGSQTVQHMFGCDLLEDGSIRGFNQYGYEGRDFIALDKDALTFTAADAAALITKRKWEQEGTVAEQMKYYLENTCIEWLRKYVSYGKDVLERREPHSLRYFYAGLSDPSPGVPQFVAVGYVDGEVFVRYDSETRRTNPRVDWIAANTDQQYWDRETDISQSNEKFFRVNLDTLQERYNQSSGSHTVQHMFGCDLLEDGSIRGFDQYGYEGRDFIALDKDALTFTAADAAALITKRKWEQEGTVAEQMKYYLENTCIEWLRKYMSYGKDVLERRERPEVRVSGMEADKILTLSCRAHGFYPRPISISWLKSGVVQEQETKRGSTVPNSDGTYHVWATIDVLPGDRDKYQCRVEHASLPQPGLFSWEPQSNLIPIVAGVAVAVVAVIAALAGFAVWKSKQGKKEKGYNVAPGSDGGSNSSNAGSNPSV
SIO_010081: LOC116500245
subclass of: SO_0000673
so part of: LOC116500245
location: join(622904..622979,623110..623373,624041..624316,625489..625752,626408..626601,639647..639728,642766..642896,658819..658951,659607..659882,670551..670823,670907..671008,671153..671185,671295..671327,671523..671542)
location: region:622904-671542:1
so has part: feature:622904-622979:1:exon
so has part: feature:623110-623373:1:exon
so has part: feature:624041-624316:1:exon
so has part: feature:625489-625752:1:exon
so has part: feature:626408-626601:1:exon
so has part: feature:639647-639728:1:exon
so has part: feature:642766-642896:1:exon
so has part: feature:658819-658951:1:exon
so has part: feature:659607-659882:1:exon
so has part: feature:670551-670823:1:exon
so has part: feature:670907-671008:1:exon
so has part: feature:671153-671185:1:exon
so has part: feature:671295-671327:1:exon
so has part: feature:671523-671542:1:exon

XP_032061057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:622904-622979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623110-623373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:624041-624316:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:625489-625752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:626408-626601:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:639647-639728:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:642766-642896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:658819-658951:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:659607-659882:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:670551-670823:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:670907-671008:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:671153-671185:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:671295-671327:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:671523-671542:1:exon

LOC116500245
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500245
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 257 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205174.1
SIO_010081: LOC116500245
subclass of: SO_0000673
so part of: LOC116500245
location: join(625244..625364,625489..625752,626408..626683,626778..627050,627134..627235,627381..627413,627586..627618,627814..627989)
location: region:625244-627989:1
so has part: feature:625244-625364:1:exon
so has part: feature:625489-625752:1:exon
so has part: feature:626408-626683:1:exon
so has part: feature:626778-627050:1:exon
so has part: feature:627134-627235:1:exon
so has part: feature:627381-627413:1:exon
so has part: feature:627586-627618:1:exon
so has part: feature:627814-627989:1:exon

position:625244:1
position: 625244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627989:1
position: 627989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625244-625364:1:exon

position:625364:1
position: 625364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:625489-625752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626408-626683:1:exon

position:626683:1
position: 626683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:626778-627050:1:exon

position:626778:1
position: 626778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627050:1
position: 627050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:627134-627235:1:exon

position:627134:1
position: 627134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627235:1
position: 627235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:627381-627413:1:exon

position:627381:1
position: 627381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627413:1
position: 627413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:627586-627618:1:exon

position:627586:1
position: 627586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627618:1
position: 627618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:627814-627989:1:exon

position:627814:1
position: 627814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X12
translation: MRPGQAGALGQCPGPGLLLLLLLLLLLLLLLLGVLGGAASEPHSLRYFYTAVSDPNPGVPQFVAMGSVDGEVFVYYDSETRRKEPRVDWIAANTDQQYWDRETEISQGNEKFFRVNLDTLQERYNQSSGSQTVQHMFGCDLLEDGSIRGFNQYGYEGRDFIALDKDALTFTAADAAALITKRKWEQEGTVAEQMKYYLENTCIEWLRKYMSYGKDMLERRERPEVRVSGMEANKILTLSCRAHGFYPRPISISWLKDGMVQEQETQKGSIVPNSDGTYHAWATINVLPGDRNKYQCRVEHASLPQPGLFSWESQSNLIPIVVGVAVAVIAVIAALAGFAVCKCKQGKKGKGYNVAPGSEGGSNNSSTGSNPSV
SIO_010081: LOC116500245
subclass of: SO_0000673
so part of: LOC116500245
location: join(625244..625364,625489..625752,626408..626683,626778..627050,627134..627235,627381..627413,627586..627618,627814..627833)
location: region:625244-627833:1
so has part: feature:625244-625364:1:exon
so has part: feature:625489-625752:1:exon
so has part: feature:626408-626683:1:exon
so has part: feature:626778-627050:1:exon
so has part: feature:627134-627235:1:exon
so has part: feature:627381-627413:1:exon
so has part: feature:627586-627618:1:exon
so has part: feature:627814-627833:1:exon

XP_032061065.1
type: Protein
SIO_000068: ncbiprotein

position:627833:1
position: 627833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625244-625364:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:625489-625752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626408-626683:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:626778-627050:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:627134-627235:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:627381-627413:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:627586-627618:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:627814-627833:1:exon

LOC116500260
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500260
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 631509..655883
location: region:631509-655883:1
so has part: feature:631509-655883:1:exon
subclass of: SO_0000010

116500260
type: Gene
SIO_000068: ncbigene

position:631509:1
position: 631509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655883:1
position: 655883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:631509-655883:1:exon

LOC116500260
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500260
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 158 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032205198.1
SIO_010081: LOC116500260
subclass of: SO_0000673
so part of: LOC116500260
location: join(631509..631616,631777..632040,632705..632980,633075..633347,633431..633532,644645..644677,655405..655436,655637..655883)
location: region:631509-655883:1
so has part: feature:631509-631616:1:exon
so has part: feature:631777-632040:1:exon
so has part: feature:632705-632980:1:exon
so has part: feature:633075-633347:1:exon
so has part: feature:633431-633532:1:exon
so has part: feature:644645-644677:1:exon
so has part: feature:655405-655436:1:exon
so has part: feature:655637-655883:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:631509-631616:1:exon

position:631616:1
position: 631616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:631777-632040:1:exon

position:631777:1
position: 631777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632040:1
position: 632040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:632705-632980:1:exon

position:632705:1
position: 632705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632980:1
position: 632980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:633075-633347:1:exon

position:633075:1
position: 633075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633347:1
position: 633347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:633431-633532:1:exon

position:633431:1
position: 633431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633532:1
position: 633532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:644645-644677:1:exon

position:644645:1
position: 644645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644677:1
position: 644677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:655405-655436:1:exon

position:655405:1
position: 655405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655436:1
position: 655436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:655637-655883:1:exon

LOC116500260
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500260
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 247 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032205199.1
SIO_010081: LOC116500260
subclass of: SO_0000673
so part of: LOC116500260
location: join(631509..631616,631777..632040,632705..632980,633075..633347,633431..633532,633677..633709,633819..633851,634052..634297)
location: region:631509-634297:1
so has part: feature:631509-631616:1:exon
so has part: feature:631777-632040:1:exon
so has part: feature:632705-632980:1:exon
so has part: feature:633075-633347:1:exon
so has part: feature:633431-633532:1:exon
so has part: feature:633677-633709:1:exon
so has part: feature:633819-633851:1:exon
so has part: feature:634052-634297:1:exon

position:634297:1
position: 634297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:631509-631616:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:631777-632040:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:632705-632980:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:633075-633347:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:633431-633532:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:633677-633709:1:exon

position:633677:1
position: 633677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633709:1
position: 633709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:633819-633851:1:exon

position:633819:1
position: 633819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633851:1
position: 633851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:634052-634297:1:exon

position:634052:1
position: 634052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500260
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500260
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 244 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032205200.1
SIO_010081: LOC116500260
subclass of: SO_0000673
so part of: LOC116500260
location: join(631509..631616,631777..632040,632705..632980,633075..633347,633431..633532,633677..633709,634052..634297)
location: region:631509-634297:1
so has part: feature:631509-631616:1:exon
so has part: feature:631777-632040:1:exon
so has part: feature:632705-632980:1:exon
so has part: feature:633075-633347:1:exon
so has part: feature:633431-633532:1:exon
so has part: feature:633677-633709:1:exon
so has part: feature:634052-634297:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:631509-631616:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:631777-632040:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:632705-632980:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:633075-633347:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:633431-633532:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:633677-633709:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:634052-634297:1:exon

LOC116500260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500260
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X1
translation: MGLGRAGALGLVLGLLLGVLGGAASEPHSLRYFYTAVSDPSPGVPQFVSVGYVDGHLIDHYDSETQRTEPRVDWFATNMDQQYWDKQTETLRGAEQIFRVNLNTLRERYNQSRGSHTLQHVYGCDLLEDGSIRGFDQYGYEGREFIAFDKDTETYTAADARAQITKRKWEEDGTVAEQMKHYLENTCIEWLRKHVSYGKDVLERRERPEVRVSGMEADKILTLSCRAHGFYPRPISISWLKDGMVQEQETKRGSTVPNSDGTYHAWATIDVLPGDRDKYQCRVEHASLPQPSLFSWEPQSNLIPIVAGVAVAVVAVIAALAGFAVWKSKQGKKGKGYNVAPGSDGETTTRPQGATPVSNHSTSAREGPEGPLCTLCCSWIWTHSLNLSHLQSATSRAKPEHNWLCTPSNRGNSPIIC
SIO_010081: LOC116500260
subclass of: SO_0000673
so part of: LOC116500260
location: join(631541..631616,631777..632040,632705..632980,633075..633347,633431..633532,644645..644677,655405..655436,655637..655834)
location: region:631541-655834:1
so has part: feature:631541-631616:1:exon
so has part: feature:631777-632040:1:exon
so has part: feature:632705-632980:1:exon
so has part: feature:633075-633347:1:exon
so has part: feature:633431-633532:1:exon
so has part: feature:644645-644677:1:exon
so has part: feature:655405-655436:1:exon
so has part: feature:655637-655834:1:exon

XP_032061089.1
type: Protein
SIO_000068: ncbiprotein

position:631541:1
position: 631541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655834:1
position: 655834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:631541-631616:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:631777-632040:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:632705-632980:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:633075-633347:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:633431-633532:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:644645-644677:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:655405-655436:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:655637-655834:1:exon

LOC116500260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500260
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X2
translation: MGLGRAGALGLVLGLLLGVLGGAASEPHSLRYFYTAVSDPSPGVPQFVSVGYVDGHLIDHYDSETQRTEPRVDWFATNMDQQYWDKQTETLRGAEQIFRVNLNTLRERYNQSRGSHTLQHVYGCDLLEDGSIRGFDQYGYEGREFIAFDKDTETYTAADARAQITKRKWEEDGTVAEQMKHYLENTCIEWLRKHVSYGKDVLERRERPEVRVSGMEADKILTLSCRAHGFYPRPISISWLKDGMVQEQETKRGSTVPNSDGTYHAWATIDVLPGDRDKYQCRVEHASLPQPSLFSWEPQSNLIPIVAGVAVAVVAVIAALAGFAVWKSKQGKKEKGYNMAPGSEGGSDSSSAGSNPSV
SIO_010081: LOC116500260
subclass of: SO_0000673
so part of: LOC116500260
location: join(631541..631616,631777..632040,632705..632980,633075..633347,633431..633532,633677..633709,633819..633851,634052..634071)
location: region:631541-634071:1
so has part: feature:631541-631616:1:exon
so has part: feature:631777-632040:1:exon
so has part: feature:632705-632980:1:exon
so has part: feature:633075-633347:1:exon
so has part: feature:633431-633532:1:exon
so has part: feature:633677-633709:1:exon
so has part: feature:633819-633851:1:exon
so has part: feature:634052-634071:1:exon

XP_032061090.1
type: Protein
SIO_000068: ncbiprotein

position:634071:1
position: 634071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:631541-631616:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:631777-632040:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:632705-632980:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:633075-633347:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:633431-633532:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:633677-633709:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:633819-633851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:634052-634071:1:exon

LOC116500260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500260
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X3
translation: MGLGRAGALGLVLGLLLGVLGGAASEPHSLRYFYTAVSDPSPGVPQFVSVGYVDGHLIDHYDSETQRTEPRVDWFATNMDQQYWDKQTETLRGAEQIFRVNLNTLRERYNQSRGSHTLQHVYGCDLLEDGSIRGFDQYGYEGREFIAFDKDTETYTAADARAQITKRKWEEDGTVAEQMKHYLENTCIEWLRKHVSYGKDVLERRERPEVRVSGMEADKILTLSCRAHGFYPRPISISWLKDGMVQEQETKRGSTVPNSDGTYHAWATIDVLPGDRDKYQCRVEHASLPQPSLFSWEPQSNLIPIVAGVAVAVVAVIAALAGFAVWKSKQGKKEKGYNMAPGSNPSV
SIO_010081: LOC116500260
subclass of: SO_0000673
so part of: LOC116500260
location: join(631541..631616,631777..632040,632705..632980,633075..633347,633431..633532,633677..633709,634052..634071)
location: region:631541-634071:1
so has part: feature:631541-631616:1:exon
so has part: feature:631777-632040:1:exon
so has part: feature:632705-632980:1:exon
so has part: feature:633075-633347:1:exon
so has part: feature:633431-633532:1:exon
so has part: feature:633677-633709:1:exon
so has part: feature:634052-634071:1:exon

XP_032061091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:631541-631616:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:631777-632040:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:632705-632980:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:633075-633347:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:633431-633532:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:633677-633709:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:634052-634071:1:exon

LOC116500245
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500245
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 253 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205170.1
SIO_010081: LOC116500245
subclass of: SO_0000673
so part of: LOC116500245
location: join(658495..658585,658688..658951,659607..659882,659977..660249,660334..660435,660580..660612,660722..660754,660956..661170)
location: region:658495-661170:1
so has part: feature:658495-658585:1:exon
so has part: feature:658688-658951:1:exon
so has part: feature:659607-659882:1:exon
so has part: feature:659977-660249:1:exon
so has part: feature:660334-660435:1:exon
so has part: feature:660580-660612:1:exon
so has part: feature:660722-660754:1:exon
so has part: feature:660956-661170:1:exon

position:658495:1
position: 658495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661170:1
position: 661170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:658495-658585:1:exon

position:658585:1
position: 658585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:658688-658951:1:exon

position:658688:1
position: 658688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:659607-659882:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:659977-660249:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:660334-660435:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:660580-660612:1:exon

position:660580:1
position: 660580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660612:1
position: 660612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:660722-660754:1:exon

position:660722:1
position: 660722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660754:1
position: 660754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:660956-661170:1:exon

position:660956:1
position: 660956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X9
translation: MRLGQAGALVQCPGSGLLLLLLGVLGGAASEPHSLRYFYTAVSDPSPGVPQFVAVGSVDGEVFVYYDSETRRKEPRVDWIAANTDQQYWDRETDISQSNEKFFRVNLDTLQERYNQSSGSHTVQHMFGCDLLEDGSIRGFDQYGYEGRDFIALDKDALTFTAADAAALITKRKWEQEGTVAEQMKYYLENTCIEWLRKYMSYGKDVLERRERPEVRVSGMETDKILTLSCRAHGFYPRPISISWLKDGVVQEQETQRGSIVPNSDGTYHAWATIDVMPGDWDKYQCRVEHASLPQPGLFSWEPQSNLIPIVVRVAVAVMAVIAALAGFAVWKSKKGKKGKGYNVVPGSEGGSNSSNAGSNPSV
SIO_010081: LOC116500245
subclass of: SO_0000673
so part of: LOC116500245
location: join(658495..658585,658688..658951,659607..659882,659977..660249,660334..660435,660580..660612,660722..660754,660956..660975)
location: region:658495-660975:1
so has part: feature:658495-658585:1:exon
so has part: feature:658688-658951:1:exon
so has part: feature:659607-659882:1:exon
so has part: feature:659977-660249:1:exon
so has part: feature:660334-660435:1:exon
so has part: feature:660580-660612:1:exon
so has part: feature:660722-660754:1:exon
so has part: feature:660956-660975:1:exon

XP_032061061.1
type: Protein
SIO_000068: ncbiprotein

position:660975:1
position: 660975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:658495-658585:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:658688-658951:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:659607-659882:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:659977-660249:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:660334-660435:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:660580-660612:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:660722-660754:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:660956-660975:1:exon

LOC116500245
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500245
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 255 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032205173.1
SIO_010081: LOC116500245
subclass of: SO_0000673
so part of: LOC116500245
location: join(663701..663808,663939..664202,664863..665138,665233..665505,665589..665690,665835..665867,666040..666073)
location: region:663701-666073:1
so has part: feature:663701-663808:1:exon
so has part: feature:663939-664202:1:exon
so has part: feature:664863-665138:1:exon
so has part: feature:665233-665505:1:exon
so has part: feature:665589-665690:1:exon
so has part: feature:665835-665867:1:exon
so has part: feature:666040-666073:1:exon

position:663701:1
position: 663701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666073:1
position: 666073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663701-663808:1:exon

position:663808:1
position: 663808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:663939-664202:1:exon

position:663939:1
position: 663939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664202:1
position: 664202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:664863-665138:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:665233-665505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:665589-665690:1:exon

position:665589:1
position: 665589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665690:1
position: 665690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:665835-665867:1:exon

position:665835:1
position: 665835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665867:1
position: 665867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:666040-666073:1:exon

position:666040:1
position: 666040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X11
translation: MGPGRAGALGLVLGLLLGVLGGAASEPHSLRYFSTAVSDPSPGVPRFMAVGSVDGEVFVRYDSETRRMAPRVDWIAENVDQQYWNRETENLRGEEQTLRLNLEILRERYNQSRGSHTVQVMYGCDLLEDGSIRGFQQHGYDGKDFLTFDKDTLTYTAADAVAQITKRKWEEDGSFLEGRKFYLENTCIEWLRKYVSYGKAMLERRERPEIRVSGMEANKILTLSCRAHGFYPRPISISWLKDGMVLEQETKRGSTVPNSDGTYHAWATIDVLPGDRDKYQCRVEHASLPQPGLFSWESQSNLIPIVAGVAVAVVAVIAALAGFAVWKSKQGKKWK
SIO_010081: LOC116500245
subclass of: SO_0000673
so part of: LOC116500245
location: join(663733..663808,663939..664202,664863..665138,665233..665505,665589..665690,665835..665851)
location: region:663733-665851:1
so has part: feature:663733-663808:1:exon
so has part: feature:663939-664202:1:exon
so has part: feature:664863-665138:1:exon
so has part: feature:665233-665505:1:exon
so has part: feature:665589-665690:1:exon
so has part: feature:665835-665851:1:exon

XP_032061064.1
type: Protein
SIO_000068: ncbiprotein

position:663733:1
position: 663733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665851:1
position: 665851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663733-663808:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:663939-664202:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:664863-665138:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:665233-665505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:665589-665690:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:665835-665851:1:exon

LOC116500245
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500245
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 253 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205171.1
SIO_010081: LOC116500245
subclass of: SO_0000673
so part of: LOC116500245
location: join(669046..669121,669252..669515,670181..670456,670551..670823,670907..671008,671153..671185,671295..671327,671523..671730)
location: region:669046-671730:1
so has part: feature:669046-669121:1:exon
so has part: feature:669252-669515:1:exon
so has part: feature:670181-670456:1:exon
so has part: feature:670551-670823:1:exon
so has part: feature:670907-671008:1:exon
so has part: feature:671153-671185:1:exon
so has part: feature:671295-671327:1:exon
so has part: feature:671523-671730:1:exon

position:669046:1
position: 669046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:669046-669121:1:exon

position:669121:1
position: 669121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:669252-669515:1:exon

position:669252:1
position: 669252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669515:1
position: 669515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:670181-670456:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670551-670823:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670907-671008:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671153-671185:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:671295-671327:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:671523-671730:1:exon

LOC116500245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X10
translation: MGLGRAGALGLVLGLLLGVLGGAASEPHSLRYFYTAVSEPSPGVPQFVAVGSVDGEVFARYDSETRRTDSMMDWTSAIDDQEYWERSNRIFQNAEQVFRVSLDILRERYNQSRGSHTWQRMYGCDLLEDGSIRGFDQHGYEGRDFIALDKDTLTFTAADTGAQITKRKWEEEGTFAERMKNYLENTCTEWLRKYISYGKDVLERRERPEVRVSGMEADKILTLSCRAHGFYPRPISISWLKSGVVQEQETKRGSTVPNSDGTYHVWATIDVLPGDRDKYQCRVEHASLPQPGLFSWEPQSNLIPIVAGVAVAVVAVIAALAGFAVWKSKQGKKEKGYNVAPGSDGGSNSSNAGSNPSV
SIO_010081: LOC116500245
subclass of: SO_0000673
so part of: LOC116500245
location: join(669046..669121,669252..669515,670181..670456,670551..670823,670907..671008,671153..671185,671295..671327,671523..671542)
location: region:669046-671542:1
so has part: feature:669046-669121:1:exon
so has part: feature:669252-669515:1:exon
so has part: feature:670181-670456:1:exon
so has part: feature:670551-670823:1:exon
so has part: feature:670907-671008:1:exon
so has part: feature:671153-671185:1:exon
so has part: feature:671295-671327:1:exon
so has part: feature:671523-671542:1:exon

XP_032061062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:669046-669121:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:669252-669515:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:670181-670456:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670551-670823:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670907-671008:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671153-671185:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:671295-671327:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:671523-671542:1:exon

TAP2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(672966..676104)
location: region:672966-676104:-1
so has part: feature:672966-676104:-1:exon
subclass of: SO_0000010

116500246
type: Gene
SIO_000068: ncbigene

position:672966:-1
position: 672966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676104:-1
position: 676104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:672966-676104:-1:exon

TAP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: TAP2
product: transporter 2, ATP binding cassette subfamily B member
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205175.1
SIO_010081: TAP2
subclass of: SO_0000673
so part of: TAP2
location: complement(join(672966..673239,673316..673452,673519..673678,673755..674117,674225..674353,674425..674622,675005..675210,675282..675412,675506..676104))
location: region:672966-676104:-1
so has part: feature:675506-676104:-1:exon
so has part: feature:675282-675412:-1:exon
so has part: feature:675005-675210:-1:exon
so has part: feature:674425-674622:-1:exon
so has part: feature:674225-674353:-1:exon
so has part: feature:673755-674117:-1:exon
so has part: feature:673519-673678:-1:exon
so has part: feature:673316-673452:-1:exon
so has part: feature:672966-673239:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:675506-676104:-1:exon

position:675506:-1
position: 675506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:675282-675412:-1:exon

position:675282:-1
position: 675282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675412:-1
position: 675412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:675005-675210:-1:exon

position:675005:-1
position: 675005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675210:-1
position: 675210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:674425-674622:-1:exon

position:674425:-1
position: 674425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674622:-1
position: 674622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:674225-674353:-1:exon

position:674225:-1
position: 674225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674353:-1
position: 674353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:673755-674117:-1:exon

position:673755:-1
position: 673755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674117:-1
position: 674117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:673519-673678:-1:exon

position:673519:-1
position: 673519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673678:-1
position: 673678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:673316-673452:-1:exon

position:673316:-1
position: 673316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673452:-1
position: 673452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:672966-673239:-1:exon

position:673239:-1
position: 673239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TAP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: TAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antigen peptide transporter 2
translation: MELLPTLRLACVLLLADLVVLAALARLAPALAQLGLVATWLEAGLRLPVLVGAGMLLAPGGPRGAAALVSLAPATFLTLRGCLELPGAPPVLLAMATPSWLALAYGAVLLALLTWTSLAPGVALGTKEVKYQAALRRQLALAWPEWPFLSGAFFFLVLAALGETSVPYCTGKALDVLRHGDGPTAFATAIGFVCLASASSSLFAGCRGSLFTFIMARLTLRTRDRLFSGLVHQDLAFFQQTTAADLASRLATDVPLASRVVPFSANIALRNLGKVLGLSAFMLALSPRLTLLALLEVPLAIVARKTYNARYQMLQQAVLDATAGTGMVVQEAISSIETVRAFAGEEEEERRYGQALTKMLRLRDQRDMEKAIFILIQRALQLTVQALVLYCGHQQLREGTLTAGGLIAFILYQNNAGSSVQALAYAYGDLLSNVAAAHKIFDYLDREPAVGTGGTSEPATLQGHVTFQHVSFAYPTRPEHLVLQDVSFELRPGEVTALAGLNGSGKSTCAGLLQRFYEPTAGEVLLDGVPLRDYKHRYLHRQVALVGQEPVLFSGSIRDNIAYGLEDCREEEIIAAAEAAGALDFISALDQGFDTDVGERGDQLSAGQKQRVAIARALVRCPTVLILDEATSALDGDGDVALQQWVQSGGDRTVLLITHHPRMLEKADRVVVLEHGTVAEMGTPAELAACGGPYSRLLQR
SIO_010081: TAP2
subclass of: SO_0000673
so part of: TAP2
location: complement(join(673060..673239,673316..673452,673519..673678,673755..674117,674225..674353,674425..674622,675005..675210,675282..675412,675506..676104))
location: region:673060-676104:-1
so has part: feature:675506-676104:-1:exon
so has part: feature:675282-675412:-1:exon
so has part: feature:675005-675210:-1:exon
so has part: feature:674425-674622:-1:exon
so has part: feature:674225-674353:-1:exon
so has part: feature:673755-674117:-1:exon
so has part: feature:673519-673678:-1:exon
so has part: feature:673316-673452:-1:exon
so has part: feature:673060-673239:-1:exon

XP_032061066.1
type: Protein
SIO_000068: ncbiprotein

position:673060:-1
position: 673060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:675506-676104:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:675282-675412:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:675005-675210:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:674425-674622:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:674225-674353:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:673755-674117:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:673519-673678:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:673316-673452:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:673060-673239:-1:exon

TAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 677079..682724
location: region:677079-682724:1
so has part: feature:677079-682724:1:exon
subclass of: SO_0000010

116500214
type: Gene
SIO_000068: ncbigene

position:677079:1
position: 677079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:682724:1
position: 682724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:677079-682724:1:exon

TAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: TAP1
product: transporter 1, ATP binding cassette subfamily B member
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205127.1
SIO_010081: TAP1
subclass of: SO_0000673
so part of: TAP1
location: join(677079..677144,677774..677876,677991..678121,678218..678423,678760..678957,679464..679592,679931..680116,680604..680777,681392..681551,681626..681762,682275..682724)
location: region:677079-682724:1
so has part: feature:677079-677144:1:exon
so has part: feature:677774-677876:1:exon
so has part: feature:677991-678121:1:exon
so has part: feature:678218-678423:1:exon
so has part: feature:678760-678957:1:exon
so has part: feature:679464-679592:1:exon
so has part: feature:679931-680116:1:exon
so has part: feature:680604-680777:1:exon
so has part: feature:681392-681551:1:exon
so has part: feature:681626-681762:1:exon
so has part: feature:682275-682724:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:677079-677144:1:exon

position:677144:1
position: 677144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:677774-677876:1:exon

position:677774:1
position: 677774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677876:1
position: 677876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:677991-678121:1:exon

position:677991:1
position: 677991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678121:1
position: 678121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:678218-678423:1:exon

position:678218:1
position: 678218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678423:1
position: 678423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:678760-678957:1:exon

position:678760:1
position: 678760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678957:1
position: 678957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:679464-679592:1:exon

position:679464:1
position: 679464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679592:1
position: 679592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:679931-680116:1:exon

position:679931:1
position: 679931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680116:1
position: 680116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:680604-680777:1:exon

position:680604:1
position: 680604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680777:1
position: 680777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:681392-681551:1:exon

position:681392:1
position: 681392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:681551:1
position: 681551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:681626-681762:1:exon

position:681626:1
position: 681626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:681762:1
position: 681762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:682275-682724:1:exon

position:682275:1
position: 682275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: TAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antigen peptide transporter 1
translation: MGASSLGEMAIPYYTGRASDWVAREDELAAIWPMVLLGLSSAVTELACDIAFVGTLSRVHGHLQRRLFGAVLRGDIAELRDEGAGDVAARVTGDVEATREALGEALSLLLWYLARGICLFSTMAWLSPRMALVTALVLPFLLLLPRVIGRFQQGLAPKVQKALAHASEVAVETFQAMATVRSFANEDGVAARYRQCLHQTHQLEKQDAVLYAVSAWTSGFSALALKMGILYYGGQLVAAGTISTGDLVTFLLYQLQFTDVVEVLLRYYPTLTKAVGSSEKIFEFLDREPQVAPSGTLAPSDLRGHLQLEDVWFSYPGRQEPVLKGVSLELRPGEVLALMGPPGSGKSTLVSLLLRLHQPTAGRLLLDGHPLSAYRHSYLCHRVATVPQEPVLFARSLHANIAYGPESWSRAQVTAAARRVGAHNFITRLPRGYDTEVGELGGQLSGGQRQGVAIARALVRDPHILVLDEPTSALDAECQQQVERELFEDSGTRRTVLLVTGQVALAARAHQVALMEGGQIREQGPPSKLLRPGSRYWHLLQDGGRQGTLGDGDKGTGSGDEGQQEPGMGTVQARMETSGDGDTRSWDGDTGSQDGDTESWDGDTRARDGDIKGRGRGADTTTPWDGDTRS
SIO_010081: TAP1
subclass of: SO_0000673
so part of: TAP1
location: join(677126..677144,677774..677876,677991..678121,678218..678423,678760..678957,679464..679592,679931..680116,680604..680777,681392..681551,681626..681762,682275..682724)
location: region:677126-682724:1
so has part: feature:677126-677144:1:exon
so has part: feature:677774-677876:1:exon
so has part: feature:677991-678121:1:exon
so has part: feature:678218-678423:1:exon
so has part: feature:678760-678957:1:exon
so has part: feature:679464-679592:1:exon
so has part: feature:679931-680116:1:exon
so has part: feature:680604-680777:1:exon
so has part: feature:681392-681551:1:exon
so has part: feature:681626-681762:1:exon
so has part: feature:682275-682724:1:exon

XP_032061018.1
type: Protein
SIO_000068: ncbiprotein

position:677126:1
position: 677126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:677126-677144:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:677774-677876:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:677991-678121:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:678218-678423:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:678760-678957:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:679464-679592:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:679931-680116:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:680604-680777:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:681392-681551:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:681626-681762:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:682275-682724:1:exon

LOC116500215
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500215
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 695449..699433
location: region:695449-699433:1
so has part: feature:695449-699433:1:exon
subclass of: SO_0000010

116500215
type: Gene
SIO_000068: ncbigene

position:695449:1
position: 695449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:699433:1
position: 699433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:695449-699433:1:exon

LOC116500215
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500215
product: butyrophilin subfamily 1 member A1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205128.1
SIO_010081: LOC116500215
subclass of: SO_0000673
so part of: LOC116500215
location: join(695449..695752,696381..696662,696792..696896,697174..697194,697727..697750,697963..697983,698083..698103,698219..698239,698895..699433)
location: region:695449-699433:1
so has part: feature:695449-695752:1:exon
so has part: feature:696381-696662:1:exon
so has part: feature:696792-696896:1:exon
so has part: feature:697174-697194:1:exon
so has part: feature:697727-697750:1:exon
so has part: feature:697963-697983:1:exon
so has part: feature:698083-698103:1:exon
so has part: feature:698219-698239:1:exon
so has part: feature:698895-699433:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:695449-695752:1:exon

position:695752:1
position: 695752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:696381-696662:1:exon

position:696381:1
position: 696381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:696662:1
position: 696662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:696792-696896:1:exon

position:696792:1
position: 696792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:696896:1
position: 696896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:697174-697194:1:exon

position:697174:1
position: 697174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:697194:1
position: 697194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:697727-697750:1:exon

position:697727:1
position: 697727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:697750:1
position: 697750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:697963-697983:1:exon

position:697963:1
position: 697963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:697983:1
position: 697983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:698083-698103:1:exon

position:698083:1
position: 698083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:698103:1
position: 698103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:698219-698239:1:exon

position:698219:1
position: 698219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:698239:1
position: 698239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:698895-699433:1:exon

position:698895:1
position: 698895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500215
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1-like
translation: MGQDVVLPCHLSPQRDARTLEIRWIRNDFSETVHHYRNGEDLYGEQMGTYAGRTELLRDGLSAGSLDLRITGLRPFDDGLYVCTVGDGHAYDEAIVELEVSATGTDPHLSLGGYEDGGVRVLCRSAGWYPLPQLLWRDARGQHLPSVSQTHSQDQEGFFEIEGAVIVTGSVEGPLSCVVRNSRLHQEREFSLHIAAAFFHNAQPWMVALALVLVLLAVSIGLGVYLYRKQAAQSRELAAKMDAKLVKQAAEMEEKDARLDEQAAELVKVTLDPDTAHPQLVVSQDKSSVRRESEGQQVPDTPERFLYWCCVLGREEFREGRHCWLVEVEGERLKYSGWAMGVARASVERKNCINRSPEEGIWAVLYDEGQLKSLTPPRTPLSLCPDPRRIWVCLDCTQRQVSFINADNGVEIFTFTAASFNGESIRPWFWLRTEGVQLCLRDSTL
SIO_010081: LOC116500215
subclass of: SO_0000673
so part of: LOC116500215
location: join(695449..695752,696381..696662,696792..696896,697174..697194,697727..697750,697963..697983,698083..698103,698219..698239,698895..699433)
location: region:695449-699433:1
so has part: feature:695449-695752:1:exon
so has part: feature:696381-696662:1:exon
so has part: feature:696792-696896:1:exon
so has part: feature:697174-697194:1:exon
so has part: feature:697727-697750:1:exon
so has part: feature:697963-697983:1:exon
so has part: feature:698083-698103:1:exon
so has part: feature:698219-698239:1:exon
so has part: feature:698895-699433:1:exon

XP_032061019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:695449-695752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:696381-696662:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:696792-696896:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:697174-697194:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:697727-697750:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:697963-697983:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:698083-698103:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:698219-698239:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:698895-699433:1:exon

LOC116500216
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500216
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 703897..708271
location: region:703897-708271:1
so has part: feature:703897-708271:1:exon
subclass of: SO_0000010

116500216
type: Gene
SIO_000068: ncbigene

position:703897:1
position: 703897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:708271:1
position: 708271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:703897-708271:1:exon

LOC116500216
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500216
product: butyrophilin subfamily 3 member A2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 44% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205129.1
SIO_010081: LOC116500216
subclass of: SO_0000673
so part of: LOC116500216
location: join(703897..703996,704865..705212,705842..706123,706253..706357,706635..706655,707178..707198,707314..707334,707432..707452,707562..707582,707805..707825,708201..708271)
location: region:703897-708271:1
so has part: feature:703897-703996:1:exon
so has part: feature:704865-705212:1:exon
so has part: feature:705842-706123:1:exon
so has part: feature:706253-706357:1:exon
so has part: feature:706635-706655:1:exon
so has part: feature:707178-707198:1:exon
so has part: feature:707314-707334:1:exon
so has part: feature:707432-707452:1:exon
so has part: feature:707562-707582:1:exon
so has part: feature:707805-707825:1:exon
so has part: feature:708201-708271:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:703897-703996:1:exon

position:703996:1
position: 703996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:704865-705212:1:exon

position:704865:1
position: 704865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705212:1
position: 705212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:705842-706123:1:exon

position:705842:1
position: 705842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706123:1
position: 706123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:706253-706357:1:exon

position:706253:1
position: 706253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706357:1
position: 706357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:706635-706655:1:exon

position:706635:1
position: 706635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706655:1
position: 706655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:707178-707198:1:exon

position:707178:1
position: 707178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707198:1
position: 707198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:707314-707334:1:exon

position:707314:1
position: 707314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707334:1
position: 707334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:707432-707452:1:exon

position:707432:1
position: 707432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707452:1
position: 707452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:707562-707582:1:exon

position:707562:1
position: 707562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707582:1
position: 707582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:707805-707825:1:exon

position:707805:1
position: 707805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707825:1
position: 707825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:708201-708271:1:exon

position:708201:1
position: 708201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500216
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500216
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 3 member A2-like
translation: MGLPWGCGCPSLNGHARGLLTSLITLLLLQLGSAQLRVVGPGHSVTATVGQDVVLPCYLSPQRNARSLEVRWIRDNNSETVHHYRNGEDLYGEQMEAYAGRTELLRDGLSAGRLELRITGLRPSDDGQYVCTVRDAHAYDEAIVELEVSATGVDPHLSLGGYEAGGVRVLCRSAGWYPLPQMLWRDARGQHLPSDPPTHSQDQEGLFEIEGAVIVTGSVEGPLSCMVRNNHLQQERKFSLHIAAAFFHNAQPWMVALALVLLLLAVSIGLGVYLYRKQAARIQELVNRDARLEELPAEIEEKDARLAELAAKVEEQAAELVWSLPVREQDCLCPFTRAKNFGV
SIO_010081: LOC116500216
subclass of: SO_0000673
so part of: LOC116500216
location: join(703897..703996,704865..705212,705842..706123,706253..706357,706635..706655,707178..707198,707314..707334,707432..707452,707562..707582,707805..707825,708201..708271)
location: region:703897-708271:1
so has part: feature:703897-703996:1:exon
so has part: feature:704865-705212:1:exon
so has part: feature:705842-706123:1:exon
so has part: feature:706253-706357:1:exon
so has part: feature:706635-706655:1:exon
so has part: feature:707178-707198:1:exon
so has part: feature:707314-707334:1:exon
so has part: feature:707432-707452:1:exon
so has part: feature:707562-707582:1:exon
so has part: feature:707805-707825:1:exon
so has part: feature:708201-708271:1:exon

XP_032061020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:703897-703996:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:704865-705212:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:705842-706123:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706253-706357:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:706635-706655:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:707178-707198:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:707314-707334:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:707432-707452:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:707562-707582:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:707805-707825:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:708201-708271:1:exon

LOC116500217
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500217
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 725015..733415
location: region:725015-733415:1
so has part: feature:725015-733415:1:exon
subclass of: SO_0000010

116500217
type: Gene
SIO_000068: ncbigene

position:725015:1
position: 725015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733415:1
position: 733415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:725015-733415:1:exon

LOC116500217
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500217
product: butyrophilin subfamily 1 member A1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205130.1
SIO_010081: LOC116500217
subclass of: SO_0000673
so part of: LOC116500217
location: join(725015..725235,725971..726218,726875..727126,727256..727360,728490..728612,729022..729369,729940..730221,730351..730455,730781..730801,731334..731357,731456..731476,731576..731596,732578..732610,732787..733415)
location: region:725015-733415:1
so has part: feature:725015-725235:1:exon
so has part: feature:725971-726218:1:exon
so has part: feature:726875-727126:1:exon
so has part: feature:727256-727360:1:exon
so has part: feature:728490-728612:1:exon
so has part: feature:729022-729369:1:exon
so has part: feature:729940-730221:1:exon
so has part: feature:730351-730455:1:exon
so has part: feature:730781-730801:1:exon
so has part: feature:731334-731357:1:exon
so has part: feature:731456-731476:1:exon
so has part: feature:731576-731596:1:exon
so has part: feature:732578-732610:1:exon
so has part: feature:732787-733415:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:725015-725235:1:exon

position:725235:1
position: 725235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:725971-726218:1:exon

position:725971:1
position: 725971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:726218:1
position: 726218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:726875-727126:1:exon

position:726875:1
position: 726875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:727126:1
position: 727126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:727256-727360:1:exon

position:727256:1
position: 727256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:727360:1
position: 727360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:728490-728612:1:exon

position:728490:1
position: 728490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:728612:1
position: 728612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:729022-729369:1:exon

position:729022:1
position: 729022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:729369:1
position: 729369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:729940-730221:1:exon

position:729940:1
position: 729940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730221:1
position: 730221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:730351-730455:1:exon

position:730351:1
position: 730351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730455:1
position: 730455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:730781-730801:1:exon

position:730781:1
position: 730781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730801:1
position: 730801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:731334-731357:1:exon

position:731334:1
position: 731334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731357:1
position: 731357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:731456-731476:1:exon

position:731456:1
position: 731456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731476:1
position: 731476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:731576-731596:1:exon

position:731576:1
position: 731576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731596:1
position: 731596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:732578-732610:1:exon

position:732578:1
position: 732578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732610:1
position: 732610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:732787-733415:1:exon

position:732787:1
position: 732787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500217
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500217
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1-like
translation: MSPERGIWAVEYDDEELTSLTSPHTPLSLSPVPTRIWVCLDCTQGQVSFINADNGVEIFTFTAASFNAETIRPCLEVRWIRDHISETVHHYRNGEDLYGEQMGAYAGRTELARDGLSAGSLDLRITGLRPSDDGQYVCTVGDAHGYAEAIVELEVSGGYEAEGVRVLCRSAGWYPLPQLLWRDARGQHLPSVSQTHSQDQEGFFEIEGTVIVTGSMEGPLSCVVRNSRLQQEWEFSLHIAAAFFHNAQPWMVALALVLLLLAVSIGLGVYLFRKQDPAQAAAELRLHRFCGCPSLTGHASGFLTSLVTLHLLQLGSAQLRVEGPGHSVAATMGQDIVLPCRLSPQRDAHSLEVRWIRDHISETVLLYRNGEDLYGEQMEAYARRTELLRDGLSAGSLDLRITGLRPSDDGLYVCTVKHADAYDEAIVELEVSATGADPHLSLGGYEDGGVRVLCRSAGWYPLPQLLWRDARGQHLPSVSQTHSQDQEGLFEIEGAVIVTGSMEGPLSCMVRSSRLQQERKFSLHIAAPFFHNAQPWKVALALVLVLLAVSIGLGVYLFRKQAAQSRELAAKKDAELGKQAAEIEEKDARLAWRKFLMSHNTVKVTLDPDTAHPQLVLSQDKSSVRWESEWQQVPDTPERFDSLCCVLGCEEFREGRHCWLVEVEGEQLKHSRWAVGVVRASVERKKWINMSPEEGIWAVQYYEGQLKSLTSPRTPLSLSPVPTRIWVCLDCTQQQVSFINADNGVQIFTFTAASFNGESIRPWLWKRTQGIQLCLKDSTPKTPSPALGGSCPSPDTPQTPLLGPAGAAQE
SIO_010081: LOC116500217
subclass of: SO_0000673
so part of: LOC116500217
location: join(725015..725235,725971..726218,726875..727126,727256..727360,728490..728612,729022..729369,729940..730221,730351..730455,730781..730801,731334..731357,731456..731476,731576..731596,732578..732610,732787..733415)
location: region:725015-733415:1
so has part: feature:725015-725235:1:exon
so has part: feature:725971-726218:1:exon
so has part: feature:726875-727126:1:exon
so has part: feature:727256-727360:1:exon
so has part: feature:728490-728612:1:exon
so has part: feature:729022-729369:1:exon
so has part: feature:729940-730221:1:exon
so has part: feature:730351-730455:1:exon
so has part: feature:730781-730801:1:exon
so has part: feature:731334-731357:1:exon
so has part: feature:731456-731476:1:exon
so has part: feature:731576-731596:1:exon
so has part: feature:732578-732610:1:exon
so has part: feature:732787-733415:1:exon

XP_032061021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:725015-725235:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:725971-726218:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:726875-727126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:727256-727360:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:728490-728612:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:729022-729369:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:729940-730221:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:730351-730455:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:730781-730801:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:731334-731357:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:731456-731476:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:731576-731596:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:732578-732610:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:732787-733415:1:exon

LOC116500252
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500252
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 742240..745464
location: region:742240-745464:1
so has part: feature:742240-745464:1:exon
subclass of: SO_0000010

116500252
type: Gene
SIO_000068: ncbigene

position:742240:1
position: 742240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745464:1
position: 745464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:742240-745464:1:exon

LOC116500252
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500252
product: zinc finger protein 2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205183.1
SIO_010081: LOC116500252
subclass of: SO_0000673
so part of: LOC116500252
location: join(742240..742373,742565..743377,743931..745464)
location: region:742240-745464:1
so has part: feature:742240-742373:1:exon
so has part: feature:742565-743377:1:exon
so has part: feature:743931-745464:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:742240-742373:1:exon

position:742373:1
position: 742373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:742565-743377:1:exon

position:742565:1
position: 742565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:743377:1
position: 743377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:743931-745464:1:exon

position:743931:1
position: 743931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500252
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500252
product: zinc finger protein 2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205184.1
SIO_010081: LOC116500252
subclass of: SO_0000673
so part of: LOC116500252
location: join(742240..742373,742565..743377,743934..745464)
location: region:742240-745464:1
so has part: feature:742240-742373:1:exon
so has part: feature:742565-743377:1:exon
so has part: feature:743934-745464:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:742240-742373:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:742565-743377:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:743934-745464:1:exon

position:743934:1
position: 743934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500252
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500252
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 2-like isoform X1
translation: MKRMSKNEKGKVRHTVHVQVGEDIVVIEDDEEDEEDKELGHGEGSESCEGHEARQGLQEGEQESTGGERKPQVKAKRRKGAYKCNECGTTFNWRHNLVRHQRLHTGERPYKCSECGKGFNDSSPLLIHEMLHRGEKPYKCLSCGKKFIQSSHLIAHQSVHTEEKPYVCPDCGKRFARHQYLIMHRRVHTGERPYECRDCGKSFRKSSDLVRHKTVHTGEKPYKCPVCGKGFTQNFRCNAHKKVHLVEKVDQQDSPSQDTQQNSSENTASPAGAGGHKEEKPQPVDSQQTEANGPSMRMEEGAACQDPEQDEALKEQSEVEPCPVQGQGDLDDPEGTLEDPKESGVHPGICVEGQTYECANCRKTFDCSNSLSQHQQLHTVEQPHKCPECGNSSDDSSDLASHQLEKCCKCPDSGIKLGDSTKLRQQSSVHKSEKFYLCSDCGKCFSRSSNLNQHKKLHTGERPHKCPECGLSFTNTSHLIVHYRIHTGERPYRCHECGKGFTMSTKCLKHERTHTGETPYRCSKCGNCYRTKISLMSHMRMHMH
SIO_010081: LOC116500252
subclass of: SO_0000673
so part of: LOC116500252
location: join(742567..743377,743931..744754)
location: region:742567-744754:1
so has part: feature:742567-743377:1:exon
so has part: feature:743931-744754:1:exon

XP_032061074.1
type: Protein
SIO_000068: ncbiprotein

position:742567:1
position: 742567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744754:1
position: 744754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:742567-743377:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743931-744754:1:exon

LOC116500252
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500252
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 2-like isoform X2
translation: MKRMSKNEKGKVRHTVHVQVGEDIVVIEDDEEDEEDKELGHGEGSESCEGHEARQGLQEGEQESTGGERKPQVKAKRRKGAYKCNECGTTFNWRHNLVRHQRLHTGERPYKCSECGKGFNDSSPLLIHEMLHRGEKPYKCLSCGKKFIQSSHLIAHQSVHTEEKPYVCPDCGKRFARHQYLIMHRRVHTGERPYECRDCGKSFRKSSDLVRHKTVHTGEKPYKCPVCGKGFTQNFRCNAHKKVHLVEKVDQQDSPSQDTQQNSSENTASPGAGGHKEEKPQPVDSQQTEANGPSMRMEEGAACQDPEQDEALKEQSEVEPCPVQGQGDLDDPEGTLEDPKESGVHPGICVEGQTYECANCRKTFDCSNSLSQHQQLHTVEQPHKCPECGNSSDDSSDLASHQLEKCCKCPDSGIKLGDSTKLRQQSSVHKSEKFYLCSDCGKCFSRSSNLNQHKKLHTGERPHKCPECGLSFTNTSHLIVHYRIHTGERPYRCHECGKGFTMSTKCLKHERTHTGETPYRCSKCGNCYRTKISLMSHMRMHMH
SIO_010081: LOC116500252
subclass of: SO_0000673
so part of: LOC116500252
location: join(742567..743377,743934..744754)
location: region:742567-744754:1
so has part: feature:742567-743377:1:exon
so has part: feature:743934-744754:1:exon

XP_032061075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:742567-743377:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743934-744754:1:exon

LOC116500232
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500232
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 773287..782791
location: region:773287-782791:1
so has part: feature:773287-782791:1:exon
subclass of: SO_0000010

116500232
type: Gene
SIO_000068: ncbigene

position:773287:1
position: 773287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782791:1
position: 782791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:773287-782791:1:exon

LOC116500232
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500232
product: HLA class II histocompatibility antigen, DM beta chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 57% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205146.1
SIO_010081: LOC116500232
subclass of: SO_0000673
so part of: LOC116500232
location: join(773287..773359,782100..782384,782467..782586,782663..782698,782781..782791)
location: region:773287-782791:1
so has part: feature:773287-773359:1:exon
so has part: feature:782100-782384:1:exon
so has part: feature:782467-782586:1:exon
so has part: feature:782663-782698:1:exon
so has part: feature:782781-782791:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:773287-773359:1:exon

position:773359:1
position: 773359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:782100-782384:1:exon