Aythya fuligula isolate bAytFul2 chromosome 32, bAytFul2.pri, whole genome shotgun sequence.
type: Entry
definition: Aythya fuligula isolate bAytFul2 chromosome 32, bAytFul2.pri, whole genome shotgun sequence.
sequence version: NC_045590.1
sequence date: 2020-01-30
sequence: sequence
division: CON
label: NC_045590.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA602521
dblink: SAMN12621346
keyword: WGS
keyword: RefSeq
source: Aythya fuligula (tufted duck)
organism: Aythya fuligula
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Aythyinae; Aythya.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020331.1.\nAssembly name: bAytFul2.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/12/31. The original whole-genome shotgun project has the\naccession WNMM00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 20-SEP-2019\nAssembly Method :: FALCON v. 2018.31.08-03.06; FALCON-Unzip\n v. 6.0.0.47841; purge_haplotigs v.\n v1.0.3+ 1.Nov.2018; scaff10x v. 4.1.0;\n Bionano Solve DLS v. 3.2.1; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishing\n & gap filling v. 6.0.0.47841; longranger\n align v. 2.2.2; freebayes Illumina\n polishing v. 1.3; gEVAL manual curation\n v. 2019-09-20; VGP assembly pipeline\n individual v. 1.5\nAssembly Name :: bAytFul2.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 64.03x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Aythya fuligula Annotation Release\n 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 1164621
topology: linear
so has quality: SO_0000987
location: 1..1164621
location: region:1-1164621:1
RO_0002162: 219594

NC_045590
type: RefSeq
SIO_000068: refseq

PRJNA602521
type: BioProject
SIO_000068: bioproject

SAMN12621346
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164621:1
position: 1164621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-1164621:1:source
so part of: sequence
organism: Aythya fuligula
mol type: genomic DNA
isolate: bAytFul2
chromosome: 32
sex: female
tissue type: lung (powdered)
dev stage: adult
country: Sweden
lat lon: 59.8509 N 17.6300 E
collection date: 28-Aug-2017
collected by: Patrik Ellstrom, Mahmoud Naguib, Josef Jarhult

219594
type: Taxonomy
SIO_000068: taxonomy

LOC116500194
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500194
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(377..12142)
location: region:377-12142:-1
so has part: feature:377-12142:-1:exon

116500194
type: Gene
SIO_000068: ncbigene

position:377:-1
position: 377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12142:-1
position: 12142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377-12142:-1:exon

LOC116500194
type: Exon
subclass of: SO_0000147
RO_0002162: 219594
gene: LOC116500194
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 75% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116500194
subclass of: SO_0000673
so part of: LOC116500194
location: complement(377..562)
location: region:377-562:-1
so has part: feature:377-562:-1:exon

position:562:-1
position: 562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377-562:-1:exon

LOC116500194
type: Exon
subclass of: SO_0000147
RO_0002162: 219594
gene: LOC116500194
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 75% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116500194
subclass of: SO_0000673
so part of: LOC116500194
location: complement(1621..1770)
location: region:1621-1770:-1
so has part: feature:1621-1770:-1:exon

position:1621:-1
position: 1621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1770:-1
position: 1770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1621-1770:-1:exon

LOC116500194
type: Exon
subclass of: SO_0000147
RO_0002162: 219594
gene: LOC116500194
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 75% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116500194
subclass of: SO_0000673
so part of: LOC116500194
location: complement(1867..1980)
location: region:1867-1980:-1
so has part: feature:1867-1980:-1:exon

position:1867:-1
position: 1867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1980:-1
position: 1980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1867-1980:-1:exon

LOC116500194
type: Exon
subclass of: SO_0000147
RO_0002162: 219594
gene: LOC116500194
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 75% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116500194
subclass of: SO_0000673
so part of: LOC116500194
location: complement(2316..2455)
location: region:2316-2455:-1
so has part: feature:2316-2455:-1:exon

position:2316:-1
position: 2316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2455:-1
position: 2455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2316-2455:-1:exon

LOC116500194
type: Exon
subclass of: SO_0000147
RO_0002162: 219594
gene: LOC116500194
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 75% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116500194
subclass of: SO_0000673
so part of: LOC116500194
location: complement(3600..3816)
location: region:3600-3816:-1
so has part: feature:3600-3816:-1:exon

position:3600:-1
position: 3600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3816:-1
position: 3816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3600-3816:-1:exon

LOC116500194
type: Exon
subclass of: SO_0000147
RO_0002162: 219594
gene: LOC116500194
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 75% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116500194
subclass of: SO_0000673
so part of: LOC116500194
location: complement(3967..4096)
location: region:3967-4096:-1
so has part: feature:3967-4096:-1:exon

position:3967:-1
position: 3967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4096:-1
position: 4096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3967-4096:-1:exon

LOC116500194
type: Exon
subclass of: SO_0000147
RO_0002162: 219594
gene: LOC116500194
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 75% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116500194
subclass of: SO_0000673
so part of: LOC116500194
location: complement(5314..5499)
location: region:5314-5499:-1
so has part: feature:5314-5499:-1:exon

position:5314:-1
position: 5314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5499:-1
position: 5499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5314-5499:-1:exon

LOC116500194
type: Exon
subclass of: SO_0000147
RO_0002162: 219594
gene: LOC116500194
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 75% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116500194
subclass of: SO_0000673
so part of: LOC116500194
location: complement(6496..6679)
location: region:6496-6679:-1
so has part: feature:6496-6679:-1:exon

position:6496:-1
position: 6496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6679:-1
position: 6679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6496-6679:-1:exon

LOC116500194
type: Exon
subclass of: SO_0000147
RO_0002162: 219594
gene: LOC116500194
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 75% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116500194
subclass of: SO_0000673
so part of: LOC116500194
location: complement(7668..7794)
location: region:7668-7794:-1
so has part: feature:7668-7794:-1:exon

position:7668:-1
position: 7668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7794:-1
position: 7794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7668-7794:-1:exon

LOC116500194
type: Exon
subclass of: SO_0000147
RO_0002162: 219594
gene: LOC116500194
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 75% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116500194
subclass of: SO_0000673
so part of: LOC116500194
location: complement(8673..8987)
location: region:8673-8987:-1
so has part: feature:8673-8987:-1:exon

position:8673:-1
position: 8673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8987:-1
position: 8987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8673-8987:-1:exon

LOC116500194
type: Exon
subclass of: SO_0000147
RO_0002162: 219594
gene: LOC116500194
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 75% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116500194
subclass of: SO_0000673
so part of: LOC116500194
location: complement(9415..9505)
location: region:9415-9505:-1
so has part: feature:9415-9505:-1:exon

position:9415:-1
position: 9415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9505:-1
position: 9505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9415-9505:-1:exon

LOC116500194
type: Exon
subclass of: SO_0000147
RO_0002162: 219594
gene: LOC116500194
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 75% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116500194
subclass of: SO_0000673
so part of: LOC116500194
location: complement(10368..10528)
location: region:10368-10528:-1
so has part: feature:10368-10528:-1:exon

position:10368:-1
position: 10368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10528:-1
position: 10528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10368-10528:-1:exon

LOC116500194
type: Exon
subclass of: SO_0000147
RO_0002162: 219594
gene: LOC116500194
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 75% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116500194
subclass of: SO_0000673
so part of: LOC116500194
location: complement(11178..11332)
location: region:11178-11332:-1
so has part: feature:11178-11332:-1:exon

position:11178:-1
position: 11178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11332:-1
position: 11332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11178-11332:-1:exon

LOC116500194
type: Exon
subclass of: SO_0000147
RO_0002162: 219594
gene: LOC116500194
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 75% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116500194
subclass of: SO_0000673
so part of: LOC116500194
location: complement(12111..12142)
location: region:12111-12142:-1
so has part: feature:12111-12142:-1:exon

position:12111:-1
position: 12111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12111-12142:-1:exon

LOC116500166
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500166
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 25231..31839
location: region:25231-31839:1
so has part: feature:25231-31839:1:exon

116500166
type: Gene
SIO_000068: ncbigene

position:25231:1
position: 25231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31839:1
position: 31839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25231-31839:1:exon

LOC116500166
type: Exon
subclass of: SO_0000147
RO_0002162: 219594
gene: LOC116500166
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC116500166
subclass of: SO_0000673
so part of: LOC116500166
location: 25231..25284
location: region:25231-25284:1
so has part: feature:25231-25284:1:exon

position:25284:1
position: 25284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25231-25284:1:exon

LOC116500166
type: Exon
subclass of: SO_0000147
RO_0002162: 219594
gene: LOC116500166
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC116500166
subclass of: SO_0000673
so part of: LOC116500166
location: 27747..27853
location: region:27747-27853:1
so has part: feature:27747-27853:1:exon

position:27747:1
position: 27747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27853:1
position: 27853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27747-27853:1:exon

LOC116500166
type: Exon
subclass of: SO_0000147
RO_0002162: 219594
gene: LOC116500166
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC116500166
subclass of: SO_0000673
so part of: LOC116500166
location: 28870..29044
location: region:28870-29044:1
so has part: feature:28870-29044:1:exon

position:28870:1
position: 28870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29044:1
position: 29044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28870-29044:1:exon

LOC116500166
type: Exon
subclass of: SO_0000147
RO_0002162: 219594
gene: LOC116500166
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC116500166
subclass of: SO_0000673
so part of: LOC116500166
location: 29706..29789
location: region:29706-29789:1
so has part: feature:29706-29789:1:exon

position:29706:1
position: 29706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29789:1
position: 29789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29706-29789:1:exon

LOC116500166
type: Exon
subclass of: SO_0000147
RO_0002162: 219594
gene: LOC116500166
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC116500166
subclass of: SO_0000673
so part of: LOC116500166
location: 30167..30319
location: region:30167-30319:1
so has part: feature:30167-30319:1:exon

position:30167:1
position: 30167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30319:1
position: 30319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30167-30319:1:exon

LOC116500166
type: Exon
subclass of: SO_0000147
RO_0002162: 219594
gene: LOC116500166
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC116500166
subclass of: SO_0000673
so part of: LOC116500166
location: 31176..31266
location: region:31176-31266:1
so has part: feature:31176-31266:1:exon

position:31176:1
position: 31176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31266:1
position: 31266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31176-31266:1:exon

LOC116500166
type: Exon
subclass of: SO_0000147
RO_0002162: 219594
gene: LOC116500166
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC116500166
subclass of: SO_0000673
so part of: LOC116500166
location: 31688..31839
location: region:31688-31839:1
so has part: feature:31688-31839:1:exon

position:31688:1
position: 31688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31688-31839:1:exon

SBK3
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: SBK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(118967..120496)
location: region:118967-120496:-1
so has part: feature:118967-120496:-1:exon
subclass of: SO_0000010

116500167
type: Gene
SIO_000068: ncbigene

position:118967:-1
position: 118967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120496:-1
position: 120496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118967-120496:-1:exon

SBK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SBK3
product: SH3 domain binding kinase family member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_032205083.1
SIO_010081: SBK3
subclass of: SO_0000673
so part of: SBK3
location: complement(join(118967..119713,120027..120229,120325..120496))
location: region:118967-120496:-1
so has part: feature:120325-120496:-1:exon
so has part: feature:120027-120229:-1:exon
so has part: feature:118967-119713:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:120325-120496:-1:exon

position:120325:-1
position: 120325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:120027-120229:-1:exon

position:120027:-1
position: 120027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120229:-1
position: 120229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:118967-119713:-1:exon

position:119713:-1
position: 119713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SBK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SBK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized serine/threonine-protein kinase SBK3
translation: MEESEEDGEDNEVFLEQLMVQTGQAVPRQELEEQYTVLEELGSGTYGRVVLTEPRDGGSPVVLKLMLKENTEWRAFLREYCIALCLSGHAACIRALPVAFESATHFAFGQELAPAGDLCTLLTPGEGLAEVLVKRCASQLAEALDFMHSRALVHRDVKLDNVLLFDCECRRVKLGDFGLTRLQGSAVRAMSSTLPYSPPELCLLQGSDTLELDSSLDVWAFAVLLFCLCTGCFPWAVAASPDPQFEDFSTWQSGVEGREAPPSWQGFAYGAQEMFRRLLRLDPDRRSPAIEVQKYLSLPWLTAQDTGARLDGGDRQEAAAGSPQAPITQGCAPGSGSGGGVRDAAGAGEQGDGSCSSGEGVPTPPAGTLALCH
SIO_010081: SBK3
subclass of: SO_0000673
so part of: SBK3
location: complement(join(118967..119713,120027..120229,120325..120496))
location: region:118967-120496:-1
so has part: feature:120325-120496:-1:exon
so has part: feature:120027-120229:-1:exon
so has part: feature:118967-119713:-1:exon

XP_032060974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120325-120496:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:120027-120229:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:118967-119713:-1:exon

LOC116500168
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500168
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(127138..138567)
location: region:127138-138567:-1
so has part: feature:127138-138567:-1:exon
subclass of: SO_0000010

116500168
type: Gene
SIO_000068: ncbigene

position:127138:-1
position: 127138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138567:-1
position: 138567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127138-138567:-1:exon

LOC116500168
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500168
product: soluble scavenger receptor cysteine-rich domain-containing protein SSC5D-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 71% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205084.1
SIO_010081: LOC116500168
subclass of: SO_0000673
so part of: LOC116500168
location: complement(join(127138..127186,127331..127478,128808..131735,132039..132347,133241..133555,134204..134518,138492..138567))
location: region:127138-138567:-1
so has part: feature:138492-138567:-1:exon
so has part: feature:134204-134518:-1:exon
so has part: feature:133241-133555:-1:exon
so has part: feature:132039-132347:-1:exon
so has part: feature:128808-131735:-1:exon
so has part: feature:127331-127478:-1:exon
so has part: feature:127138-127186:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:138492-138567:-1:exon

position:138492:-1
position: 138492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:134204-134518:-1:exon

position:134204:-1
position: 134204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134518:-1
position: 134518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:133241-133555:-1:exon

position:133241:-1
position: 133241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133555:-1
position: 133555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:132039-132347:-1:exon

position:132039:-1
position: 132039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132347:-1
position: 132347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:128808-131735:-1:exon

position:128808:-1
position: 128808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131735:-1
position: 131735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:127331-127478:-1:exon

position:127331:-1
position: 127331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127478:-1
position: 127478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:127138-127186:-1:exon

position:127186:-1
position: 127186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500168
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500168
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: soluble scavenger receptor cysteine-rich domain-containing protein SSC5D-like
translation: MATVARGGVGRFHRLGWAGGSGSDHGLFPVRLAGGPGQCAGRVEVLHTGRWGTVCDDDWGLPDAAVVCRELGCGTALAAPTGAWFGEGSGPIWLNGLRCRGGEGRLAQCRHRGWRSHVCTHEEDASAVCSGTPTLRLVGAEGHCAGRVEVLHAGQWGSVCDDGWGLEDAAVVCQELGCGAALAAPRGAFFGEGTGPIWLDNVRCQGNESTLLQCPAAPWGITDCQHREDAAVVCAAQLRLAGGPGRCAGRVEVLHAGRWGTVCDDSWGLPDAAVVCRELGCGVAREAPRSAHFGPGTGPVWLDEVNCEGTEPTLRRCPAEPWGRHNCNHHEDAAVICAGPEDLPSPTGTSQWPPGLDRVGTIPSTTRRPLGREPSSTIPSITQRPPGQDRVSTTPAKAGRDPIRIIRITRLKAEQDPAGVIQSTKPKAGPGAAGTTRSKVGREPGGPTRSKAGWDPAGTNRSKAVRDPVGITKPKAGHDLAATNRSKAGRDPVGIIKPKTGQDLPATNRSKVGREPGGPTKPKAGQNLAGTNRSKAGRDPVAINKVKAGQNLSGTNRSKTGRDPVAITKPKAGQNPAGTNRSKAGRDPVGITKPKAGLNIAGTNRSKAGQDPVGTTKAKAGQDLSGTNTSKAGRDPVGITKPKAGQDLPATNRSKAGQDPVGTTKAKVGQDLSGTNRSKAGRDQIGTIPVTQPKAEQDPLSTVQITQPKAERVVVGAKQTTMSPTRWVSVGTTQGIKPKAGWGLVGATRSTQTLEGRDPVSATQTDGWHPWPKAGQDSAPTVVLPVGATTWRNHHVGEPGPEGTIRSTHPVAVLDLGGTMGSTHPTAEPGLEGPIRVTHPPARLDPEGSTWSARPEAKLGLDDIVRSTRPTAEPGPGGTTWDPRPSARPGPEGPMRSTRPMDAELGAEGTMRTRPVSELNLNSTQRGTSAEPDPRGNTHPSAEPGPESTMWSTHPTAEPGPEDTMRITHPTAEPSPEGTMRIIHPTAEPGPEGTMRIIHPTAEPGPGGNTWSTNPTVEPGPEGIVMSTHPIAEPGLEDTMMSTHPTAEPDTDGAMWRTHPTAEPGPEDSMANTYPTAEPGQGGIMMNTHPTAEPGPGATMRSTHPTAGLDPEGNTQSTSPAAELGLFDIIWSTQPTAEPGPGGTTLGVELDPESTMRSTHPTVELGPESTMRSTHPTVELGPESTMRSTYLPEEPGLHGTSQSAHSSTELGLADTLQSARPTAVVPTWSTHPSTEPNPDGTMRSSHPATASGLDGTTWGTSPSDDFDINGTMRSTHPSAEAGLEGTMESTHPTSEPGPEGTMWSTHPTTRPDPEAPYGDPWHPGTPSPPPAPYGDPWYPDSSSTHRAPPHTP
SIO_010081: LOC116500168
subclass of: SO_0000673
so part of: LOC116500168
location: complement(join(127363..127478,128808..131735,132039..132347,133241..133555,134204..134518,138492..138567))
location: region:127363-138567:-1
so has part: feature:138492-138567:-1:exon
so has part: feature:134204-134518:-1:exon
so has part: feature:133241-133555:-1:exon
so has part: feature:132039-132347:-1:exon
so has part: feature:128808-131735:-1:exon
so has part: feature:127363-127478:-1:exon

XP_032060975.1
type: Protein
SIO_000068: ncbiprotein

position:127363:-1
position: 127363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138492-138567:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134204-134518:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133241-133555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132039-132347:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:128808-131735:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:127363-127478:-1:exon

ZNF628
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: ZNF628
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(138777..142871)
location: region:138777-142871:-1
so has part: feature:138777-142871:-1:exon
subclass of: SO_0000010

116500169
type: Gene
SIO_000068: ncbigene

position:138777:-1
position: 138777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142871:-1
position: 142871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138777-142871:-1:exon

ZNF628
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ZNF628
product: zinc finger protein 628
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205085.1
SIO_010081: ZNF628
subclass of: SO_0000673
so part of: ZNF628
location: complement(138777..142871)
location: region:138777-142871:-1
so has part: feature:138777-142871:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:138777-142871:-1:exon

ZNF628
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: ZNF628
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 628
translation: MVGAQQPELAAGRAASGSGEHPYECLECGKVFKWSSRLIHHQRTHTGERPYKCSECPKAFKGSSALLYHQRSHTGERPYKCSECGKAFKRSSLLQIHQSVHTGLRAFKCALCGMAFKWSSHYQYHLRQHTGERPYKCSACPKAFKNSSSLRRHRHIHTGERPYVCAACGKAFTQSTNLRQHQRTHTGERPYACAHCGKTFTHSSNLLLHQRTHAAARPHKCPACPKAFVSDACLQKHLQSHAAPPPPQPPPLLLEAVEAVGMLWKCGECQLAFATQELLLGHQRGHLRPATPGEAAATPAAHRCPTCGKTFKNGSGLARHRHSHAAERPYKCSLCHKSFGQLAGLLGHQRGHSAEQHPPPAQPEAPRPPPVPSAAAPAPAERPYQCTECGKAFKGSSGLRYHMRDHTGERPYKCSECPKAFKRSSLLAIHQRVHTGLRAFKCAECGLTFKWSSHYQYHLRLHTGERPYACPDCPKAFKNTSCLRRHRQLHTGERPHACPVCGKAFAQTSNLRQHQRTHTGERPYACAHCGKTFTHSSNLQLHQRTHSSARPHQCPLCPKAFVMASYLQRHLRTHAAGPKGPPRAAPRDGPVLQATLSLEVAAPDAQTFLLVQTAQGLQLIPSPPPPPQKLILLPAAPRPPPEPTPRRGEPPGPGQSLLLVPGTGTALPGLRLQAVAGTTQGPGPGVLLLQGLPEQPPCQAGAPQGQAAAEGASVQLGALPQPSDVTSVQVQAAEVANVQLQATEVANVANVQLQALPQPSEVANIQLQALPQPSKVTNIQLQAAEVTNVHLQALSQPSEVANIQLQATEVANVHLQALSQPSEVANVQLQALPQPSKVTNIQLQATEVASVANVHLQALSQPSEVANIQLQATEVADVQLQPPDVTSIELQATEVTNVQLQALPPPSEVTNIQLQALPQPPGVTDIELQAAEVANVQLQALPQPSEVPGVHLQATEVPDIQLQTSDVTSVQLETAEVPNLHLQATQVPSVQLQTLPQPPEAPSVHLQPAEVPDLQLQALEVPDLHLQAVEVPPLHLQPPAGAPPAPQPPGVPLAGGPAAPEVLLVQGGAAPAVGLGVLQTAEGLRSILVLRGAGAQPSAGTPAGPPKVLVLRGEPRRGERGAADGEGGAQAVVQLLPGPPAPQLPVVQGVQALPGAQLVHTF
SIO_010081: ZNF628
subclass of: SO_0000673
so part of: ZNF628
location: complement(139383..142871)
location: region:139383-142871:-1
so has part: feature:139383-142871:-1:exon

XP_032060976.1
type: Protein
SIO_000068: ncbiprotein

position:139383:-1
position: 139383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139383-142871:-1:exon

LIG1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LIG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 143576..165706
location: region:143576-165706:1
so has part: feature:143576-165706:1:exon
subclass of: SO_0000010

116500170
type: Gene
SIO_000068: ncbigene

position:143576:1
position: 143576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165706:1
position: 165706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143576-165706:1:exon

LIG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LIG1
product: DNA ligase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205087.1
SIO_010081: LIG1
subclass of: SO_0000673
so part of: LIG1
location: join(143576..143629,160535..160722,161224..161280,161365..161537,161644..161810,161906..161982,162079..162170,162290..162389,162663..162748,162839..162954,163046..163141,163247..163357,163462..163533,163630..163774,163867..163949,164024..164176,164254..164307,164388..164531,164618..164710,164821..165706)
location: region:143576-165706:1
so has part: feature:143576-143629:1:exon
so has part: feature:160535-160722:1:exon
so has part: feature:161224-161280:1:exon
so has part: feature:161365-161537:1:exon
so has part: feature:161644-161810:1:exon
so has part: feature:161906-161982:1:exon
so has part: feature:162079-162170:1:exon
so has part: feature:162290-162389:1:exon
so has part: feature:162663-162748:1:exon
so has part: feature:162839-162954:1:exon
so has part: feature:163046-163141:1:exon
so has part: feature:163247-163357:1:exon
so has part: feature:163462-163533:1:exon
so has part: feature:163630-163774:1:exon
so has part: feature:163867-163949:1:exon
so has part: feature:164024-164176:1:exon
so has part: feature:164254-164307:1:exon
so has part: feature:164388-164531:1:exon
so has part: feature:164618-164710:1:exon
so has part: feature:164821-165706:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:143576-143629:1:exon

position:143629:1
position: 143629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:160535-160722:1:exon

position:160535:1
position: 160535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160722:1
position: 160722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:161224-161280:1:exon

position:161224:1
position: 161224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161280:1
position: 161280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:161365-161537:1:exon

position:161365:1
position: 161365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161537:1
position: 161537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:161644-161810:1:exon

position:161644:1
position: 161644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161810:1
position: 161810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:161906-161982:1:exon

position:161906:1
position: 161906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161982:1
position: 161982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:162079-162170:1:exon

position:162079:1
position: 162079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162170:1
position: 162170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:162290-162389:1:exon

position:162290:1
position: 162290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162389:1
position: 162389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:162663-162748:1:exon

position:162663:1
position: 162663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162748:1
position: 162748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:162839-162954:1:exon

position:162839:1
position: 162839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162954:1
position: 162954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:163046-163141:1:exon

position:163046:1
position: 163046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163141:1
position: 163141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:163247-163357:1:exon

position:163247:1
position: 163247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163357:1
position: 163357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:163462-163533:1:exon

position:163462:1
position: 163462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163533:1
position: 163533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:163630-163774:1:exon

position:163630:1
position: 163630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163774:1
position: 163774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:163867-163949:1:exon

position:163867:1
position: 163867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163949:1
position: 163949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:164024-164176:1:exon

position:164024:1
position: 164024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164176:1
position: 164176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:164254-164307:1:exon

position:164254:1
position: 164254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164307:1
position: 164307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:164388-164531:1:exon

position:164388:1
position: 164388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164531:1
position: 164531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:164618-164710:1:exon

position:164618:1
position: 164618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164710:1
position: 164710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:164821-165706:1:exon

position:164821:1
position: 164821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LIG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LIG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA ligase 1
translation: MVAMGVVMQMKDAAGPMAVGDSTVGGVWGHPWVLGVPVVPPLPPPTLWCPRSPPPLDPSQYDPAKSGYHPLRDACWGHGQSVPYLAVARTFERIEEASARLKIIETLSNFLRSVLALSPGELLPCLRLCLNRPGAASEGLELGIGESLLTRALAQATGRQLAQIRSEAQDKGDLGLVAESSRCTQRTVLAPAPLSAAGVLGKLREMATMSGNASSSKKIGIIKGLFVACRHSEARYLVRSLSGKLRIGLAEQSVLTALAHAVALTPPGQGWPPAVLDAGQGMAPEARRAWLEEQSRILKQTFCELPDYAAIVPVLLEHGLEKLPQHCGITPGVPLKPMLAQPARGVGELLKRFEEAAFTCEYKYDGERAQIHVLESGAVFIYSRNQENTTAKYPDLVDRIPKVLKPGVRSCILDAEAVAWDRTTRQIQPFQVLMTRKRKDVDAAAIKVQVCLYAFDLLYLNGEPLVRQPLSARRKLLRESFEEVEGEFVFATSADTRSAEEVSEFLDKAIKASCEGLMVKTLEVDATYEIAKRSHKWLKLKKDYLDGLGDTLDLVVIGAYLGKGKRAGIYGGFLLACYDEESEEYQSICKIGTGFTEESLEKHYGFLKEHVLAQPRPYYRWDSGAAPDRWLAAVQVWEVKCGDLSISPVYRAAVGLVDEEKGISLRFPRFLRVREDKKPEEATSSTQVAELYKKQQQIQNQQQAEKGEDEEFY
SIO_010081: LIG1
subclass of: SO_0000673
so part of: LIG1
location: join(143576..143629,160535..160722,161224..161280,161365..161537,161644..161810,161906..161982,162079..162170,162290..162389,162663..162748,162839..162954,163046..163141,163247..163357,163462..163533,163630..163774,163867..163949,164024..164176,164254..164307,164388..164531,164618..164710,164821..164901)
location: region:143576-164901:1
so has part: feature:143576-143629:1:exon
so has part: feature:160535-160722:1:exon
so has part: feature:161224-161280:1:exon
so has part: feature:161365-161537:1:exon
so has part: feature:161644-161810:1:exon
so has part: feature:161906-161982:1:exon
so has part: feature:162079-162170:1:exon
so has part: feature:162290-162389:1:exon
so has part: feature:162663-162748:1:exon
so has part: feature:162839-162954:1:exon
so has part: feature:163046-163141:1:exon
so has part: feature:163247-163357:1:exon
so has part: feature:163462-163533:1:exon
so has part: feature:163630-163774:1:exon
so has part: feature:163867-163949:1:exon
so has part: feature:164024-164176:1:exon
so has part: feature:164254-164307:1:exon
so has part: feature:164388-164531:1:exon
so has part: feature:164618-164710:1:exon
so has part: feature:164821-164901:1:exon

XP_032060978.1
type: Protein
SIO_000068: ncbiprotein

position:164901:1
position: 164901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143576-143629:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:160535-160722:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:161224-161280:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:161365-161537:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:161644-161810:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:161906-161982:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:162079-162170:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:162290-162389:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:162663-162748:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:162839-162954:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:163046-163141:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:163247-163357:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:163462-163533:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:163630-163774:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:163867-163949:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:164024-164176:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:164254-164307:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:164388-164531:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:164618-164710:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:164821-164901:1:exon

LOC116500190
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500190
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(171864..181010)
location: region:171864-181010:-1
so has part: feature:171864-181010:-1:exon
subclass of: SO_0000010

116500190
type: Gene
SIO_000068: ncbigene

position:171864:-1
position: 171864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181010:-1
position: 181010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171864-181010:-1:exon

LOC116500190
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500190
product: uncharacterized LOC116500190, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205107.1
SIO_010081: LOC116500190
subclass of: SO_0000673
so part of: LOC116500190
location: complement(join(171864..172593,174826..174972))
location: region:171864-174972:-1
so has part: feature:174826-174972:-1:exon
so has part: feature:171864-172593:-1:exon

position:174972:-1
position: 174972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174826-174972:-1:exon

position:174826:-1
position: 174826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:171864-172593:-1:exon

position:172593:-1
position: 172593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500190
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500190
product: uncharacterized LOC116500190, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032205106.1
SIO_010081: LOC116500190
subclass of: SO_0000673
so part of: LOC116500190
location: complement(join(171867..172593,179340..179745,180818..181010))
location: region:171867-181010:-1
so has part: feature:180818-181010:-1:exon
so has part: feature:179340-179745:-1:exon
so has part: feature:171867-172593:-1:exon

position:171867:-1
position: 171867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180818-181010:-1:exon

position:180818:-1
position: 180818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:179340-179745:-1:exon

position:179340:-1
position: 179340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179745:-1
position: 179745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:171867-172593:-1:exon

LOC116500190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500190
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116500190 isoform X2
translation: MAGKKVQKSRNPQLQSDLESLMGNIEVCRSVGVEIINNTKKVTLEDFRSYCFSGKIRTVHPFEIGPQSVGRCIFAKTPYSLRGSVGVLVCKASSFSLAIMFSNPFDYVLYSIEFALELFKTENHMGNLHAVFSNMMESKPYCRSTLFQRAQLASDHETLEVSLGNIRVRAKMSNSAKAILKVQVDDIDPPPYSKNM
SIO_010081: LOC116500190
subclass of: SO_0000673
so part of: LOC116500190
location: complement(join(172146..172593,174826..174968))
location: region:172146-174968:-1
so has part: feature:174826-174968:-1:exon
so has part: feature:172146-172593:-1:exon

XP_032060998.1
type: Protein
SIO_000068: ncbiprotein

position:172146:-1
position: 172146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174968:-1
position: 174968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174826-174968:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:172146-172593:-1:exon

LOC116500190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500190
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116500190 isoform X1
translation: MIRRKRSAKKVQKCNNPQLQSNLESLMGNIEVCRSVGVEIINNTKKVTLEDFRSYCFSGKIRTVHPFEIGPQSVGRCIFAKTPYSLRGSVGVLLCKASSFSLAIMFSNPFDYVLYSIEFALELFKTENHMGNLHAVFSNMMESKPYCRSTLFQRAQLASDHETLEVSSGNIRVRAKMSNSAKAILKVQELLLQWQDPDRSPL
SIO_010081: LOC116500190
subclass of: SO_0000673
so part of: LOC116500190
location: complement(join(172549..172593,179340..179745,180818..180975))
location: region:172549-180975:-1
so has part: feature:180818-180975:-1:exon
so has part: feature:179340-179745:-1:exon
so has part: feature:172549-172593:-1:exon

XP_032060997.1
type: Protein
SIO_000068: ncbiprotein

position:172549:-1
position: 172549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180975:-1
position: 180975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180818-180975:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:179340-179745:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:172549-172593:-1:exon

LOC116500171
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500171
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 186892..240228
location: region:186892-240228:1
so has part: feature:186892-240228:1:exon
subclass of: SO_0000010

116500171
type: Gene
SIO_000068: ncbigene

position:186892:1
position: 186892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240228:1
position: 240228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186892-240228:1:exon

LOC116500171
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500171
product: deleted in malignant brain tumors 1 protein-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
transcript id: XM_032205088.1
SIO_010081: LOC116500171
subclass of: SO_0000673
so part of: LOC116500171
location: join(186892..186967,195329..195649,196756..197086,197477..197811,198719..199033,199419..199733,199964..200278,201169..201487,201848..201852,202348..202667,213359..213694,215055..215358,216072..216401,216894..217223,217307..217678,225318..225656,225736..226065,226889..227068,227632..227946,228478..228807,229123..229452,230037..230375,231480..231809,232523..232852,233387..233710,234428..235014,235574..235912,236735..237064,237872..238225,238506..238835,239793..239909,240086..240228)
location: region:186892-240228:1
so has part: feature:186892-186967:1:exon
so has part: feature:195329-195649:1:exon
so has part: feature:196756-197086:1:exon
so has part: feature:197477-197811:1:exon
so has part: feature:198719-199033:1:exon
so has part: feature:199419-199733:1:exon
so has part: feature:199964-200278:1:exon
so has part: feature:201169-201487:1:exon
so has part: feature:201848-201852:1:exon
so has part: feature:202348-202667:1:exon
so has part: feature:213359-213694:1:exon
so has part: feature:215055-215358:1:exon
so has part: feature:216072-216401:1:exon
so has part: feature:216894-217223:1:exon
so has part: feature:217307-217678:1:exon
so has part: feature:225318-225656:1:exon
so has part: feature:225736-226065:1:exon
so has part: feature:226889-227068:1:exon
so has part: feature:227632-227946:1:exon
so has part: feature:228478-228807:1:exon
so has part: feature:229123-229452:1:exon
so has part: feature:230037-230375:1:exon
so has part: feature:231480-231809:1:exon
so has part: feature:232523-232852:1:exon
so has part: feature:233387-233710:1:exon
so has part: feature:234428-235014:1:exon
so has part: feature:235574-235912:1:exon
so has part: feature:236735-237064:1:exon
so has part: feature:237872-238225:1:exon
so has part: feature:238506-238835:1:exon
so has part: feature:239793-239909:1:exon
so has part: feature:240086-240228:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186892-186967:1:exon

position:186967:1
position: 186967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:195329-195649:1:exon

position:195329:1
position: 195329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195649:1
position: 195649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:196756-197086:1:exon

position:196756:1
position: 196756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197086:1
position: 197086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:197477-197811:1:exon

position:197477:1
position: 197477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197811:1
position: 197811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:198719-199033:1:exon

position:198719:1
position: 198719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199033:1
position: 199033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:199419-199733:1:exon

position:199419:1
position: 199419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199733:1
position: 199733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:199964-200278:1:exon

position:199964:1
position: 199964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200278:1
position: 200278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:201169-201487:1:exon

position:201169:1
position: 201169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201487:1
position: 201487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:201848-201852:1:exon

position:201848:1
position: 201848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201852:1
position: 201852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:202348-202667:1:exon

position:202348:1
position: 202348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202667:1
position: 202667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:213359-213694:1:exon

position:213359:1
position: 213359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213694:1
position: 213694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:215055-215358:1:exon

position:215055:1
position: 215055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215358:1
position: 215358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:216072-216401:1:exon

position:216072:1
position: 216072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216401:1
position: 216401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:216894-217223:1:exon

position:216894:1
position: 216894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217223:1
position: 217223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:217307-217678:1:exon

position:217307:1
position: 217307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217678:1
position: 217678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:225318-225656:1:exon

position:225318:1
position: 225318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225656:1
position: 225656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:225736-226065:1:exon

position:225736:1
position: 225736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226065:1
position: 226065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:226889-227068:1:exon

position:226889:1
position: 226889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227068:1
position: 227068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:227632-227946:1:exon

position:227632:1
position: 227632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227946:1
position: 227946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:228478-228807:1:exon

position:228478:1
position: 228478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228807:1
position: 228807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:229123-229452:1:exon

position:229123:1
position: 229123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229452:1
position: 229452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:230037-230375:1:exon

position:230037:1
position: 230037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230375:1
position: 230375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:231480-231809:1:exon

position:231480:1
position: 231480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231809:1
position: 231809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:232523-232852:1:exon

position:232523:1
position: 232523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232852:1
position: 232852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:233387-233710:1:exon

position:233387:1
position: 233387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233710:1
position: 233710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:234428-235014:1:exon

position:234428:1
position: 234428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235014:1
position: 235014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:235574-235912:1:exon

position:235574:1
position: 235574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235912:1
position: 235912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:236735-237064:1:exon

position:236735:1
position: 236735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237064:1
position: 237064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:237872-238225:1:exon

position:237872:1
position: 237872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238225:1
position: 238225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:238506-238835:1:exon

position:238506:1
position: 238506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238835:1
position: 238835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:239793-239909:1:exon

position:239793:1
position: 239793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239909:1
position: 239909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:240086-240228:1:exon

position:240086:1
position: 240086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500171
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500171
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 4 bases at 4 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:197805..197807,aa:OTHER)
transl except: (pos:234912..234914,aa:OTHER)
transl except: (pos:234957..234959,aa:OTHER)
transl except: (pos:234972..234974,aa:OTHER)
product: LOW QUALITY PROTEIN: deleted in malignant brain tumors 1 protein-like
translation: METQTVPYSSTYSRQHCAIVNRMPMPSSPAQIRLVNGPDPCTGRLEVFYNGTWGTVCDDHWSLVEARVVCRQLGCGMGLSAVGGARYGRGEDPIWLDNVQCTGTEAALSECRARPWGDHNCGHGEDVSVVCSGAPTPGLTRARLVNGSGPCSGRVEVFHNSRWGTVCDDGWNLLDAEVVCREVGCGSALSASPGAAFGQGAGPIWLDEVTCAGTEASLSLCQARSWGSHNCKHSEDAGVECSGFPEPTQVRLVNGSSHCSGRVEIHHNQQWGTICDDGWDLRDAEVVCRQLGCGMAVSVPGKAHFGRGHAPIWLDDVNCTGTEGAITECRLEPWGEHNCNHNEDASVVCSGKXPEPTELRLVNGPNRCAGRVEVLHHQQWGSVCDNHWDMEDAKVVCRQLGCGAPISAPGWAKFGRGYDPIWLEKVTCLGTEAALSECEAQTWGVHNCHHGEDASVVCSEVVRLVNGPSRCAGRVEVLEQRQWGTVCDDAWDLSDAEVVCWQLGCGTATAAPGLAYFGQGHGPIWLAEVNCTGTEAALSKCRARPKGVHLCNHGEDAGVVCSGSYPPEVRLVNGSNRCSGRVEVLHNQRWGSVCDDDWDLDDAQVVCQQLGCGTAIWAPRAARFGLGNDPIWLDDVNCTGSEAALSECRARPWGDNNCNHREDASVVCAGPLQLRLVNGSSRCSGRVEVLRNQQWGTVCDDGWDLRDAEVVCRQLGCGMAVSAPGSAQFGQGSSHIWLQGVECTGTEAALSECSSRMGQQSYCNHGKDAGVVCSGKADPVALRLVNGSSFCAGRVEVLHKQLWGTVCDDGWDMNDAAVVCRQLGCGVAVSAPDRAWFGRGHIAIWMDDVNCTGGEDTLLECLARPWGEHNCDHGEDAGVVCSGKRVPLRLLDGPHRCAGRVEVYYSNRWGTVCDDQWDLDDANVVCRQLHCGIALSTSRPGEFRAGSGPIWLDDVNCTGTEVALSYCRANDWGKTNCHHGEDAGVVCAGNTLKKLWLRLVNGPNRCAGRVELLYGHEWGTVCDDDWSFTDAKVVCRQLGCGTAVSAYSSAYFGQGTGPIWLDNVQCSGTEASLSECQAKPWGVNNCDHGEDAGVVCTGTAVKVPAQLRLQNGPSRCAGRVEVLHEHQWGTVCDDGWSLSEATVVCRQLSCGTAVSAPVLAHFGPGSGRVWLDNVNCTGAEAALSECHARPWGSNDCDHGEDAGVVCSDTDTSRHRLLRLVNGSNSCIGRVEVLHDQKWGTVCDDTWDINDAAVVCRELGCGMAMSAPGSAHFGQGSDPIWLDNVHCMGTESTFAECGLKSWGEHNCGHSEDAGVVCSAVLPETSSPLLSDAGTNPLQLRVKDGPGPCSGRVEVLYNATWYGVCDSDWSLLEAQVVCRQLGCGPAQSAPIGGQFSPEHGHTLLEGLSCRGSESLLLECQHRNMGPGQCKHGFAAGVVCMEMEGTASPDPEGLRLVDGPGRCAGRVEVLHNGTWGTVCDDNWSVREGRVVCRQLGCGTVLSVSQGARHGEGLGQIWLDDVNCTGTEAALSECQARPWGQHNCHHVEDASVECSGSPNSRASELGKLQLLNGPNRCVGRVEVLHDHMWGTVCDDGWDLMDATVVCRQLGCGTALMATKGAHYGRGQDPIWLDEVNCTGTEATIFDCKASAWGVNNCYHGEDAGVVCSASGVSISAELRLANGTTRCNGRVEVFHNATWAALCDDGWGLAEAQVVCRQLGCGTALLAPEGDQIRLVNYGSRCAGRVEIFHNKQWGTVCDDNWDLLDANVVCRQLGCGRALSAPGWAQFGQGTGVIWLDETNCTGFEYALSTCWARQWGINNCYHGEDAGVVCSDAIIPEPARLRLVNGFHRCAGRVEVFQDEEWGAVCDHGWDKKDAEVVCRQLGCGTALSASGEIHLGAGSLHTWLDNVSCEGTEQSLMKCRASPLGKSGCSHGKYASVVCSGSAVSSFAPIRLVDGPGRCAGRVEVFHNEQWGTVCDDSWEFPDAAVVCRQLDCGVVISAPR…
SIO_010081: LOC116500171
subclass of: SO_0000673
so part of: LOC116500171
location: join(186892..186967,195329..195649,196756..197086,197477..197811,198719..199033,199419..199733,199964..200278,201169..201487,201848..201852,202348..202667,213359..213694,215055..215358,216072..216401,216894..217223,217307..217678,225318..225656,225736..226065,226889..227068,227632..227946,228478..228807,229123..229452,230037..230375,231480..231809,232523..232852,233387..233710,234428..235014,235574..235912,236735..237064,237872..238225,238506..238835,239793..239909,240086..240228)
location: region:186892-240228:1
so has part: feature:186892-186967:1:exon
so has part: feature:195329-195649:1:exon
so has part: feature:196756-197086:1:exon
so has part: feature:197477-197811:1:exon
so has part: feature:198719-199033:1:exon
so has part: feature:199419-199733:1:exon
so has part: feature:199964-200278:1:exon
so has part: feature:201169-201487:1:exon
so has part: feature:201848-201852:1:exon
so has part: feature:202348-202667:1:exon
so has part: feature:213359-213694:1:exon
so has part: feature:215055-215358:1:exon
so has part: feature:216072-216401:1:exon
so has part: feature:216894-217223:1:exon
so has part: feature:217307-217678:1:exon
so has part: feature:225318-225656:1:exon
so has part: feature:225736-226065:1:exon
so has part: feature:226889-227068:1:exon
so has part: feature:227632-227946:1:exon
so has part: feature:228478-228807:1:exon
so has part: feature:229123-229452:1:exon
so has part: feature:230037-230375:1:exon
so has part: feature:231480-231809:1:exon
so has part: feature:232523-232852:1:exon
so has part: feature:233387-233710:1:exon
so has part: feature:234428-235014:1:exon
so has part: feature:235574-235912:1:exon
so has part: feature:236735-237064:1:exon
so has part: feature:237872-238225:1:exon
so has part: feature:238506-238835:1:exon
so has part: feature:239793-239909:1:exon
so has part: feature:240086-240228:1:exon

XP_032060979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:186892-186967:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:195329-195649:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196756-197086:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197477-197811:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:198719-199033:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:199419-199733:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:199964-200278:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:201169-201487:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:201848-201852:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:202348-202667:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:213359-213694:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:215055-215358:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:216072-216401:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:216894-217223:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:217307-217678:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:225318-225656:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:225736-226065:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:226889-227068:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:227632-227946:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:228478-228807:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:229123-229452:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:230037-230375:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:231480-231809:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:232523-232852:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:233387-233710:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:234428-235014:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:235574-235912:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:236735-237064:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:237872-238225:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:238506-238835:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:239793-239909:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:240086-240228:1:exon

LOC116500186
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500186
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(243904..251731)
location: region:243904-251731:-1
so has part: feature:243904-251731:-1:exon
subclass of: SO_0000010

116500186
type: Gene
SIO_000068: ncbigene

position:243904:-1
position: 243904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251731:-1
position: 251731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243904-251731:-1:exon

LOC116500186
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500186
product: zinc finger protein 768-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032205103.1
SIO_010081: LOC116500186
subclass of: SO_0000673
so part of: LOC116500186
location: complement(join(243904..247474,250038..250137,251696..251731))
location: region:243904-251731:-1
so has part: feature:251696-251731:-1:exon
so has part: feature:250038-250137:-1:exon
so has part: feature:243904-247474:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:251696-251731:-1:exon

position:251696:-1
position: 251696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:250038-250137:-1:exon

position:250038:-1
position: 250038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250137:-1
position: 250137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:243904-247474:-1:exon

position:247474:-1
position: 247474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500186
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500186
product: zinc finger protein 768-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205102.1
SIO_010081: LOC116500186
subclass of: SO_0000673
so part of: LOC116500186
location: complement(join(243904..247474,250038..250946))
location: region:243904-250946:-1
so has part: feature:250038-250946:-1:exon
so has part: feature:243904-247474:-1:exon

position:250946:-1
position: 250946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250038-250946:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243904-247474:-1:exon

LOC116500186
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500186
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 768-like
translation: MEEQPGSPACEPPFSLRRVCVSEDGPEGEEQEETTEKDAPRVQLAGDSPERHRQVSPRRSGRCWQGRGSLAPQDVDSPGQKAGEGEGGAPCPEPKAPGELQPRRPFRRKHRLYLKPKSNPAPASPGPGERAEEPGPSRGKRLRLIWGQAGDFRRKKSRLENGLEEAPLVPQSSEEEEEGKGSRSCSPEPPLPGDARPKPDFVQLIDEHGIYSTAKLVLGGAAGELEEAAVVLPPHLKRGASVASSGAEFEIREVIVDEKPFQCGVCEKAFKRAWELFSHEVVHNEERPFRCDLCEASFKRHSDFKSHRLVHTEERPFRCELCGKRFKRSSNLQEHRRIHTGERPFHCACCDKSFKTPYELQRHTLTHCTEKPFKCADCGKDFPTSNALLLHQRQHCDDKPHVCGVCGKKFTYGHSLKVHERVHTGDRPFVCPLCGKGFKQSNALSSHERVHTGERPFVCKTCGKAFKQSSYLVIHERAHTGERPYKCEACGKAFARPSLLLQHHRVHSQERPYKCSFCHKFFKDLAYLAVHEKVHTGETPYKCSVCDKGFAHPSNLLQHQRVHRDG
SIO_010081: LOC116500186
subclass of: SO_0000673
so part of: LOC116500186
location: complement(245737..247437)
location: region:245737-247437:-1
so has part: feature:245737-247437:-1:exon

XP_032060993.1
type: Protein
SIO_000068: ncbiprotein

position:245737:-1
position: 245737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247437:-1
position: 247437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245737-247437:-1:exon

LOC116500186
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500186
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 768-like
translation: MEEQPGSPACEPPFSLRRVCVSEDGPEGEEQEETTEKDAPRVQLAGDSPERHRQVSPRRSGRCWQGRGSLAPQDVDSPGQKAGEGEGGAPCPEPKAPGELQPRRPFRRKHRLYLKPKSNPAPASPGPGERAEEPGPSRGKRLRLIWGQAGDFRRKKSRLENGLEEAPLVPQSSEEEEEGKGSRSCSPEPPLPGDARPKPDFVQLIDEHGIYSTAKLVLGGAAGELEEAAVVLPPHLKRGASVASSGAEFEIREVIVDEKPFQCGVCEKAFKRAWELFSHEVVHNEERPFRCDLCEASFKRHSDFKSHRLVHTEERPFRCELCGKRFKRSSNLQEHRRIHTGERPFHCACCDKSFKTPYELQRHTLTHCTEKPFKCADCGKDFPTSNALLLHQRQHCDDKPHVCGVCGKKFTYGHSLKVHERVHTGDRPFVCPLCGKGFKQSNALSSHERVHTGERPFVCKTCGKAFKQSSYLVIHERAHTGERPYKCEACGKAFARPSLLLQHHRVHSQERPYKCSFCHKFFKDLAYLAVHEKVHTGETPYKCSVCDKGFAHPSNLLQHQRVHRDG
SIO_010081: LOC116500186
subclass of: SO_0000673
so part of: LOC116500186
location: complement(245737..247437)
location: region:245737-247437:-1
so has part: feature:245737-247437:-1:exon

XP_032060994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245737-247437:-1:exon

LOC116500188
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500188
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 271084..273620
location: region:271084-273620:1
so has part: feature:271084-273620:1:exon
subclass of: SO_0000010

116500188
type: Gene
SIO_000068: ncbigene

position:271084:1
position: 271084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273620:1
position: 273620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271084-273620:1:exon

LOC116500188
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500188
product: sulfotransferase 2B1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
transcript id: XM_032205105.1
SIO_010081: LOC116500188
subclass of: SO_0000673
so part of: LOC116500188
location: join(271084..271219,271819..272027,272406..272532,272889..272983,273071..273251,273505..273620)
location: region:271084-273620:1
so has part: feature:271084-271219:1:exon
so has part: feature:271819-272027:1:exon
so has part: feature:272406-272532:1:exon
so has part: feature:272889-272983:1:exon
so has part: feature:273071-273251:1:exon
so has part: feature:273505-273620:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:271084-271219:1:exon

position:271219:1
position: 271219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:271819-272027:1:exon

position:271819:1
position: 271819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272027:1
position: 272027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:272406-272532:1:exon

position:272406:1
position: 272406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272532:1
position: 272532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:272889-272983:1:exon

position:272889:1
position: 272889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272983:1
position: 272983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:273071-273251:1:exon

position:273071:1
position: 273071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273251:1
position: 273251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:273505-273620:1:exon

position:273505:1
position: 273505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500188
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500188
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sulfotransferase 2B1-like
translation: MPVHYVTYKGIKFPPAYNSEHSLSFAHNEFLVRDDDVFNVTYPKSGTVWMTEILSLIRSRGHPSWSQTILNSDRMPWFSTRLGLEAALSYPSPRLLTCHLPRHIFPKSFSHSTAKVIYTLRDPRDVVVSYYYFSKMCSSYEDPTSFDQFLRDFLNGELPHGSWFEHVQGWMEMKDQENFFFITYEELKQDLQGSVRRICQFLGQDLDDAAVSSVVRNASFSAMRENPMCSSVLLPADIMDQTKGQFLRKGICGDWKNHFTVAQSETFDRIYQDRMQGLNMAFPWDRH
SIO_010081: LOC116500188
subclass of: SO_0000673
so part of: LOC116500188
location: join(271084..271219,271819..272027,272406..272532,272889..272983,273071..273251,273505..273620)
location: region:271084-273620:1
so has part: feature:271084-271219:1:exon
so has part: feature:271819-272027:1:exon
so has part: feature:272406-272532:1:exon
so has part: feature:272889-272983:1:exon
so has part: feature:273071-273251:1:exon
so has part: feature:273505-273620:1:exon

XP_032060996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271084-271219:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271819-272027:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:272406-272532:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:272889-272983:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:273071-273251:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:273505-273620:1:exon

LOC116500187
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500187
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 279503..285671
location: region:279503-285671:1
so has part: feature:279503-285671:1:exon
subclass of: SO_0000010

116500187
type: Gene
SIO_000068: ncbigene

position:279503:1
position: 279503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285671:1
position: 285671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279503-285671:1:exon

LOC116500187
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500187
product: soluble scavenger receptor cysteine-rich domain-containing protein SSC5D-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_032205104.1
SIO_010081: LOC116500187
subclass of: SO_0000673
so part of: LOC116500187
location: join(279503..279533,281156..281182,281959..282285,282745..283074,283448..283777,284409..284738,285637..285671)
location: region:279503-285671:1
so has part: feature:279503-279533:1:exon
so has part: feature:281156-281182:1:exon
so has part: feature:281959-282285:1:exon
so has part: feature:282745-283074:1:exon
so has part: feature:283448-283777:1:exon
so has part: feature:284409-284738:1:exon
so has part: feature:285637-285671:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:279503-279533:1:exon

position:279533:1
position: 279533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:281156-281182:1:exon

position:281156:1
position: 281156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281182:1
position: 281182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:281959-282285:1:exon

position:281959:1
position: 281959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282285:1
position: 282285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:282745-283074:1:exon

position:282745:1
position: 282745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283074:1
position: 283074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:283448-283777:1:exon

position:283448:1
position: 283448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283777:1
position: 283777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:284409-284738:1:exon

position:284409:1
position: 284409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284738:1
position: 284738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:285637-285671:1:exon

position:285637:1
position: 285637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500187
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500187
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: soluble scavenger receptor cysteine-rich domain-containing protein SSC5D-like
translation: MRFVLLACLWASLTGVLLADADTTKLEIRLVDGPNSCSGRVEVLHKDTWGTVCDDGWDLREARVVCRHLGCGTALSAPHESKYGEGKGQIWLSDMNCKGTEGSLTECKAKPWGENTCNHVEDASVECSGTDIPEPGPVRLVGGPDRCAGRVEVLHEEQWGSVCHDDWDIKDAQVVCKQLGCGDAVLAPIGAKFGRGFDTIWLDDVNCTGVEADLSECQARPWGDHNCYHGEDASAICSESGITISTSVRLVDGPNRCTGRVEVLHNDVWGTVCDDGWDLREAKVVCKQLGCGTALSALPESKYGEGKGQIWLTDVNCTGTEGSITECETKPWGENTCNHVEDASVVCSEVDVPETGPVRLVDGPNKCAGRVEVLHENRWGSVCDDHWDMEDAKVVCKQVGCGSPLSALGGARYGRGPDVIWLDDVNCTGTEESIFDCQARPWGQHDCYHGEDADVVCAFNKNLEEPETS
SIO_010081: LOC116500187
subclass of: SO_0000673
so part of: LOC116500187
location: join(279503..279533,281156..281182,281959..282285,282745..283074,283448..283777,284409..284738,285637..285671)
location: region:279503-285671:1
so has part: feature:279503-279533:1:exon
so has part: feature:281156-281182:1:exon
so has part: feature:281959-282285:1:exon
so has part: feature:282745-283074:1:exon
so has part: feature:283448-283777:1:exon
so has part: feature:284409-284738:1:exon
so has part: feature:285637-285671:1:exon

XP_032060995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279503-279533:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:281156-281182:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:281959-282285:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:282745-283074:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283448-283777:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:284409-284738:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285637-285671:1:exon

LOC116500172
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500172
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(288296..305733)
location: region:288296-305733:-1
so has part: feature:288296-305733:-1:exon
subclass of: SO_0000010

116500172
type: Gene
SIO_000068: ncbigene

position:288296:-1
position: 288296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305733:-1
position: 305733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288296-305733:-1:exon

LOC116500172
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500172
product: deleted in malignant brain tumors 1 protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_032205089.1
SIO_010081: LOC116500172
subclass of: SO_0000673
so part of: LOC116500172
location: complement(join(288296..288666,291204..291518,292335..292658,294595..294918,297010..297333,298024..298347,299722..300045,300896..301219,302607..302939,305697..305733))
location: region:288296-305733:-1
so has part: feature:305697-305733:-1:exon
so has part: feature:302607-302939:-1:exon
so has part: feature:300896-301219:-1:exon
so has part: feature:299722-300045:-1:exon
so has part: feature:298024-298347:-1:exon
so has part: feature:297010-297333:-1:exon
so has part: feature:294595-294918:-1:exon
so has part: feature:292335-292658:-1:exon
so has part: feature:291204-291518:-1:exon
so has part: feature:288296-288666:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:305697-305733:-1:exon

position:305697:-1
position: 305697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:302607-302939:-1:exon

position:302607:-1
position: 302607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302939:-1
position: 302939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:300896-301219:-1:exon

position:300896:-1
position: 300896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301219:-1
position: 301219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:299722-300045:-1:exon

position:299722:-1
position: 299722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300045:-1
position: 300045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:298024-298347:-1:exon

position:298024:-1
position: 298024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298347:-1
position: 298347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:297010-297333:-1:exon

position:297010:-1
position: 297010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297333:-1
position: 297333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:294595-294918:-1:exon

position:294595:-1
position: 294595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294918:-1
position: 294918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:292335-292658:-1:exon

position:292335:-1
position: 292335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292658:-1
position: 292658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:291204-291518:-1:exon

position:291204:-1
position: 291204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291518:-1
position: 291518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:288296-288666:-1:exon

position:288666:-1
position: 288666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500172
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500172
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(join(301218..301219, 302607)),aa:OTHER)
product: LOW QUALITY PROTEIN: deleted in malignant brain tumors 1 protein-like
translation: METVLFLLAWLWGVANSAPIRLVNGPNRCTGRLEVLWNQQWGTVCDDSWDLSDAMVVCRQLECGEALSAPGLAQFGQGTGRIWLDDMNCNGTEVDLSACRTRPWGEHNCNHGEDAGVVCSGNFXLNKTVPIRLVNGTSHCSGRVEVFYGHQWGTVCDDNWDIVDAEVVCRQLGCGTALSAPSSAYFGRGSEPIWLDEVICRGTEAALSECSTKPWGLHDCVHGEDAGVVCSGFAKPAPLRLVDGLTPCSGRIEVFYGQRWGTVCDDDWDLVDAEVVCRQLGCGKALSAPHRAYFGQGSDPIWLDNVNCTGTEAALSECMATPWGVHNCGHGEDAGVLCEGFSELFPVRLVNGSNSCSGRVEVFHEQQWGTVCDDSWDLADAQVVCRQLGCGAAISAPGSARFGQGTGQIWLDDVNCAGAESILTECRAKPWGDHNCNHNEDASVECSDVAETAPIRLVNGPSHCAGRVEVFHDQQWGTVCDDGWDIAEANVVCRQLGCGTALSAPGSARFGEGSDPIWLDDMNCIGTEAALSECQFQPWGSHNCRHGEDAGVVCSDIPRVAPLQLMDGPNRCSGRVEVFYGQQWGTVCGDSWDIRDAEVVCQQLGCGKALSTPASAYFGKGSGPIWLDDVNCTGTETALSKCETSLWGAHNCSHGEDAGVVCLGVPEPVPVRLVNGSNFCSGRVEVFHEQQWGTVCDDSWDLADAQVVCRQLGCGAAISAPGSARFGQGTGQIWLDDVNCAGAETALSDCKARSWGDHNCNHNEDASVFCSEAAPIRLVNGSSPCAGRVEVFHDQQWGTVCDDGWDTADANVVCRQLGCGTALSAPGSAHFGEGSDPIWLDDMNCIGTEAALSECQFQPWGSHNCRHGEDAGVVCSGIAEIAPLRLVNGPTHCAGRVEVLQSQQWGTVCDDNWDLSDAEVVCQQLGCGKAMSAPGSAYFGQGYGRIWLDDVKCSGRESALSKCVARPWGVHNCNHGEDAGVICSGNLHPCPILLDISSH
SIO_010081: LOC116500172
subclass of: SO_0000673
so part of: LOC116500172
location: complement(join(288296..288666,291204..291518,292335..292658,294595..294918,297010..297333,298024..298347,299722..300045,300896..301219,302607..302939,305697..305733))
location: region:288296-305733:-1
so has part: feature:305697-305733:-1:exon
so has part: feature:302607-302939:-1:exon
so has part: feature:300896-301219:-1:exon
so has part: feature:299722-300045:-1:exon
so has part: feature:298024-298347:-1:exon
so has part: feature:297010-297333:-1:exon
so has part: feature:294595-294918:-1:exon
so has part: feature:292335-292658:-1:exon
so has part: feature:291204-291518:-1:exon
so has part: feature:288296-288666:-1:exon

XP_032060980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:305697-305733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:302607-302939:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:300896-301219:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299722-300045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:298024-298347:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:297010-297333:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:294595-294918:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:292335-292658:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:291204-291518:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:288296-288666:-1:exon

LOC116500173
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500173
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 326993..338682
location: region:326993-338682:1
so has part: feature:326993-338682:1:exon
subclass of: SO_0000010

116500173
type: Gene
SIO_000068: ncbigene

position:326993:1
position: 326993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338682:1
position: 338682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326993-338682:1:exon

LOC116500173
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500173
product: butyrophilin subfamily 3 member A3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_032205090.1
SIO_010081: LOC116500173
subclass of: SO_0000673
so part of: LOC116500173
location: join(326993..327040,330279..330351,331144..331416,332517..332615,333283..333309,334411..334437,335375..335401,335996..336022,336448..336474,337245..337265,337551..337577,338153..338682)
location: region:326993-338682:1
so has part: feature:326993-327040:1:exon
so has part: feature:330279-330351:1:exon
so has part: feature:331144-331416:1:exon
so has part: feature:332517-332615:1:exon
so has part: feature:333283-333309:1:exon
so has part: feature:334411-334437:1:exon
so has part: feature:335375-335401:1:exon
so has part: feature:335996-336022:1:exon
so has part: feature:336448-336474:1:exon
so has part: feature:337245-337265:1:exon
so has part: feature:337551-337577:1:exon
so has part: feature:338153-338682:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:326993-327040:1:exon

position:327040:1
position: 327040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:330279-330351:1:exon

position:330279:1
position: 330279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330351:1
position: 330351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:331144-331416:1:exon

position:331144:1
position: 331144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331416:1
position: 331416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:332517-332615:1:exon

position:332517:1
position: 332517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332615:1
position: 332615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:333283-333309:1:exon

position:333283:1
position: 333283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333309:1
position: 333309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:334411-334437:1:exon

position:334411:1
position: 334411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334437:1
position: 334437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:335375-335401:1:exon

position:335375:1
position: 335375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335401:1
position: 335401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:335996-336022:1:exon

position:335996:1
position: 335996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336022:1
position: 336022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:336448-336474:1:exon

position:336448:1
position: 336448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336474:1
position: 336474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:337245-337265:1:exon

position:337245:1
position: 337245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337265:1
position: 337265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:337551-337577:1:exon

position:337551:1
position: 337551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337577:1
position: 337577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:338153-338682:1:exon

position:338153:1
position: 338153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500173
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500173
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 3 member A3-like
translation: MEPRKFRTNIQKNFFMARDSVQLTAVIFILMLVSTYQPIEGAGHDPLLVVDDYKDDGIRLKCFSERLFSQVQMLWTDSRGNNITGTPLTTGTSTANVSSSIVLKPGSGNSVSCKIIDKLLKTSTESSVVIADVFFPTTSPWLAAFVVILLLSVFLVIAAFYKLRVNNKATTRALNAQKEIQQDIDDLNHQLDEMQKNFQKEIDDAMEKIDKARIELEFWKARSNAVNITLDQKYKHPSLCINEEKNRVKSSIQEENALKMMVAATEGFSENEQNEHYWEVEVGDQSEWELGVVTEEIRNALTSSTVNCLPGENLLSLQFSQGKYILTNEKDLRNCKQCSVVAVFLDQKRKKLSFYDAEEKNSIGSIFYNLSGKLYPFFSPGSDGKWLGVRPVKTLNLLPSL
SIO_010081: LOC116500173
subclass of: SO_0000673
so part of: LOC116500173
location: join(326993..327040,330279..330351,331144..331416,332517..332615,333283..333309,334411..334437,335375..335401,335996..336022,336448..336474,337245..337265,337551..337577,338153..338682)
location: region:326993-338682:1
so has part: feature:326993-327040:1:exon
so has part: feature:330279-330351:1:exon
so has part: feature:331144-331416:1:exon
so has part: feature:332517-332615:1:exon
so has part: feature:333283-333309:1:exon
so has part: feature:334411-334437:1:exon
so has part: feature:335375-335401:1:exon
so has part: feature:335996-336022:1:exon
so has part: feature:336448-336474:1:exon
so has part: feature:337245-337265:1:exon
so has part: feature:337551-337577:1:exon
so has part: feature:338153-338682:1:exon

XP_032060981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:326993-327040:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:330279-330351:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:331144-331416:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:332517-332615:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:333283-333309:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:334411-334437:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:335375-335401:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:335996-336022:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:336448-336474:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:337245-337265:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:337551-337577:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:338153-338682:1:exon

LOC116500175
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500175
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 371117..401309
location: region:371117-401309:1
so has part: feature:371117-401309:1:exon
subclass of: SO_0000010

116500175
type: Gene
SIO_000068: ncbigene

position:371117:1
position: 371117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401309:1
position: 401309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371117-401309:1:exon

LOC116500175
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500175
product: butyrophilin subfamily 1 member A1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_032205091.1
SIO_010081: LOC116500175
subclass of: SO_0000673
so part of: LOC116500175
location: join(371117..371213,372965..373036,384382..384723,385845..386108,390634..390687,391153..391173,391916..391936,392817..392837,393580..393600,394481..394501,395244..395264,396145..396165,396908..396928,397809..397829,399946..399972,400750..401309)
location: region:371117-401309:1
so has part: feature:371117-371213:1:exon
so has part: feature:372965-373036:1:exon
so has part: feature:384382-384723:1:exon
so has part: feature:385845-386108:1:exon
so has part: feature:390634-390687:1:exon
so has part: feature:391153-391173:1:exon
so has part: feature:391916-391936:1:exon
so has part: feature:392817-392837:1:exon
so has part: feature:393580-393600:1:exon
so has part: feature:394481-394501:1:exon
so has part: feature:395244-395264:1:exon
so has part: feature:396145-396165:1:exon
so has part: feature:396908-396928:1:exon
so has part: feature:397809-397829:1:exon
so has part: feature:399946-399972:1:exon
so has part: feature:400750-401309:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:371117-371213:1:exon

position:371213:1
position: 371213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:372965-373036:1:exon

position:372965:1
position: 372965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373036:1
position: 373036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:384382-384723:1:exon

position:384382:1
position: 384382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384723:1
position: 384723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:385845-386108:1:exon

position:385845:1
position: 385845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386108:1
position: 386108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:390634-390687:1:exon

position:390634:1
position: 390634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390687:1
position: 390687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:391153-391173:1:exon

position:391153:1
position: 391153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391173:1
position: 391173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:391916-391936:1:exon

position:391916:1
position: 391916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391936:1
position: 391936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:392817-392837:1:exon

position:392817:1
position: 392817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392837:1
position: 392837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:393580-393600:1:exon

position:393580:1
position: 393580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393600:1
position: 393600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:394481-394501:1:exon

position:394481:1
position: 394481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394501:1
position: 394501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:395244-395264:1:exon

position:395244:1
position: 395244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395264:1
position: 395264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:396145-396165:1:exon

position:396145:1
position: 396145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396165:1
position: 396165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:396908-396928:1:exon

position:396908:1
position: 396908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396928:1
position: 396928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:397809-397829:1:exon

position:397809:1
position: 397809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397829:1
position: 397829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:399946-399972:1:exon

position:399946:1
position: 399946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399972:1
position: 399972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:400750-401309:1:exon

position:400750:1
position: 400750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500175
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1-like
translation: MENGLTSSSASSLSILGWILSGPIDLRTSKCRTFFGKCNDEKEKDFVQELVNYRKDCEVPITINVDPSVVCVGEQVTLSCQLTHSLPSNTGLIWYKKEKERDTPLCSSPSLGGVVEQYQDEEWCRIKGRWERRSLLLIIQQVQVTDEGEYVCAVSGSAGSQEAVTHLDVTALGNKPTLERDLQEEGMCRYTCKSKGWNPKPEVLWTNYGGGNKNVEAETYVTWNERDLFALQSIMTVPCDDIDVKYVVTLVKEKISRTAFLLQIFKYFIWYPSIDTKSLKKENAYAQRQIESLKKENAYAQRQIESLKKENAYAQRQIESLKKENAYAQRQIESLKKENELLHVQRYKVDVILDANTAHPRLQVSEDGKSVTDTGVIRRVPVKKERFDCQAFVLAKEGYESGRRYWEVDVGRRSNWILGVAQETVTRKGEVVLSPQNGFWAIALSDEQEYGVHTDPWTRLTVSGRPRKIGIFLDIPAKKLSFYNVRQKQALYTFTFDSDRTQEVRLFPFFSTGSTAIKAETEPLQIAQEFDDEI
SIO_010081: LOC116500175
subclass of: SO_0000673
so part of: LOC116500175
location: join(371117..371213,372965..373036,384382..384723,385845..386108,390634..390687,391153..391173,391916..391936,392817..392837,393580..393600,394481..394501,395244..395264,396145..396165,396908..396928,397809..397829,399946..399972,400750..401309)
location: region:371117-401309:1
so has part: feature:371117-371213:1:exon
so has part: feature:372965-373036:1:exon
so has part: feature:384382-384723:1:exon
so has part: feature:385845-386108:1:exon
so has part: feature:390634-390687:1:exon
so has part: feature:391153-391173:1:exon
so has part: feature:391916-391936:1:exon
so has part: feature:392817-392837:1:exon
so has part: feature:393580-393600:1:exon
so has part: feature:394481-394501:1:exon
so has part: feature:395244-395264:1:exon
so has part: feature:396145-396165:1:exon
so has part: feature:396908-396928:1:exon
so has part: feature:397809-397829:1:exon
so has part: feature:399946-399972:1:exon
so has part: feature:400750-401309:1:exon

XP_032060982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371117-371213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:372965-373036:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:384382-384723:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:385845-386108:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:390634-390687:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:391153-391173:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:391916-391936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:392817-392837:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:393580-393600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:394481-394501:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:395244-395264:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:396145-396165:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:396908-396928:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:397809-397829:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:399946-399972:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:400750-401309:1:exon

LOC116500176
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500176
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(580077..599758)
location: region:580077-599758:-1
so has part: feature:580077-599758:-1:exon
subclass of: SO_0000010

116500176
type: Gene
SIO_000068: ncbigene

position:580077:-1
position: 580077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599758:-1
position: 599758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580077-599758:-1:exon

LOC116500176
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500176
product: butyrophilin-like protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_032205092.1
SIO_010081: LOC116500176
subclass of: SO_0000673
so part of: LOC116500176
location: complement(join(580077..580190,581714..582276,582689..582715,583257..583277,583509..583535,586273..586545,588644..589016,599068..599118,599609..599758))
location: region:580077-599758:-1
so has part: feature:599609-599758:-1:exon
so has part: feature:599068-599118:-1:exon
so has part: feature:588644-589016:-1:exon
so has part: feature:586273-586545:-1:exon
so has part: feature:583509-583535:-1:exon
so has part: feature:583257-583277:-1:exon
so has part: feature:582689-582715:-1:exon
so has part: feature:581714-582276:-1:exon
so has part: feature:580077-580190:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:599609-599758:-1:exon

position:599609:-1
position: 599609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:599068-599118:-1:exon

position:599068:-1
position: 599068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599118:-1
position: 599118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:588644-589016:-1:exon

position:588644:-1
position: 588644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589016:-1
position: 589016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:586273-586545:-1:exon

position:586273:-1
position: 586273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586545:-1
position: 586545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:583509-583535:-1:exon

position:583509:-1
position: 583509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583535:-1
position: 583535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:583257-583277:-1:exon

position:583257:-1
position: 583257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583277:-1
position: 583277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:582689-582715:-1:exon

position:582689:-1
position: 582689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582715:-1
position: 582715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:581714-582276:-1:exon

position:581714:-1
position: 581714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582276:-1
position: 582276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:580077-580190:-1:exon

position:580190:-1
position: 580190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500176
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500176
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin-like protein 3
translation: MLIDTEGIAISPVCLPKVPVSFDFITPVLEATHYVFIVGGIRNSVCSPYQSPDSSSCSGALMEEQQKAGVYSSLVPTENFEVISPPNVLGVVGLDTVLPCNVTSMKPLYDIEVQWKKITDGRIEDVYIWRNTVNKPGQKYVGRTELLKDGLAAGNVSLTLKNVLPADEGTYSCIVNSKDWSADTTTVLSIAGTNEVFFEILGPRGQGIELACRSHGWFPKPTVEWVVRNKQMLSPDTEIHQDSKELFSVLSRVTITGQEVEEVTCQIQNNMAQAEKTTVRLSNYDSLQARYDTINRELEFRRARSYMVPITLDVARKHPELALSPDKRTVHHEPSDQGSIIKCQLPIVVGREGFALGRHYWEVQVWDGLDWEVGVLTETVRDTLIGESWQELPKHGVWSLRREKGKFWPEEANNVMHQNTAPLAAVGLDLDLEQNTLSFYNAGVSGRILEVSIEPSMKLYPFLKPGLGKVGEKGKPLSINHNTGWDYPQKMQHDMRNYPTELKFSWRRLVESFAKLRNLIAKGSLAIDKPVS
SIO_010081: LOC116500176
subclass of: SO_0000673
so part of: LOC116500176
location: complement(join(580077..580190,581714..582276,582689..582715,583257..583277,583509..583535,586273..586545,588644..589016,599068..599118,599609..599758))
location: region:580077-599758:-1
so has part: feature:599609-599758:-1:exon
so has part: feature:599068-599118:-1:exon
so has part: feature:588644-589016:-1:exon
so has part: feature:586273-586545:-1:exon
so has part: feature:583509-583535:-1:exon
so has part: feature:583257-583277:-1:exon
so has part: feature:582689-582715:-1:exon
so has part: feature:581714-582276:-1:exon
so has part: feature:580077-580190:-1:exon

XP_032060983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:599609-599758:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:599068-599118:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:588644-589016:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:586273-586545:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:583509-583535:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:583257-583277:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:582689-582715:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:581714-582276:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:580077-580190:-1:exon

LOC116500177
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500177
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(605390..616846)
location: region:605390-616846:-1
so has part: feature:605390-616846:-1:exon
subclass of: SO_0000010

116500177
type: Gene
SIO_000068: ncbigene

position:605390:-1
position: 605390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616846:-1
position: 616846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605390-616846:-1:exon

LOC116500177
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500177
product: butyrophilin subfamily 3 member A2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_032205093.1
SIO_010081: LOC116500177
subclass of: SO_0000673
so part of: LOC116500177
location: complement(join(605390..605931,606451..606477,607616..607636,608779..608805,609627..609653,610120..610146,610749..610775,611801..611827,612200..612298,613720..614004,615140..615490,616774..616846))
location: region:605390-616846:-1
so has part: feature:616774-616846:-1:exon
so has part: feature:615140-615490:-1:exon
so has part: feature:613720-614004:-1:exon
so has part: feature:612200-612298:-1:exon
so has part: feature:611801-611827:-1:exon
so has part: feature:610749-610775:-1:exon
so has part: feature:610120-610146:-1:exon
so has part: feature:609627-609653:-1:exon
so has part: feature:608779-608805:-1:exon
so has part: feature:607616-607636:-1:exon
so has part: feature:606451-606477:-1:exon
so has part: feature:605390-605931:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:616774-616846:-1:exon

position:616774:-1
position: 616774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:615140-615490:-1:exon

position:615140:-1
position: 615140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615490:-1
position: 615490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:613720-614004:-1:exon

position:613720:-1
position: 613720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614004:-1
position: 614004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:612200-612298:-1:exon

position:612200:-1
position: 612200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612298:-1
position: 612298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:611801-611827:-1:exon

position:611801:-1
position: 611801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611827:-1
position: 611827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:610749-610775:-1:exon

position:610749:-1
position: 610749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610775:-1
position: 610775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:610120-610146:-1:exon

position:610120:-1
position: 610120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610146:-1
position: 610146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:609627-609653:-1:exon

position:609627:-1
position: 609627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609653:-1
position: 609653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:608779-608805:-1:exon

position:608779:-1
position: 608779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608805:-1
position: 608805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:607616-607636:-1:exon

position:607616:-1
position: 607616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607636:-1
position: 607636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:606451-606477:-1:exon

position:606451:-1
position: 606451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606477:-1
position: 606477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:605390-605931:-1:exon

position:605931:-1
position: 605931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500177
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500177
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 3 member A2-like
translation: MGSTLQWLTAIHILTFQHVSCLITDQFISYPPNSSVIGVIGEGVVLPCYVVAENFPEIFSVQWIFNEQSQKIPVSTYDGKTQKEKQDERYQGRTEFFHSEFGAGNMSLLLKNIRTSDKGSYTCVVSFNDEYHDVLIELKVAAKGSVPSISLRSYMKQSIGLTCHADGWFPKPEVIWLDGQGQVRKEQSTTKMMMMPSGVYRVITSMNLKPGSDMEVSCRIVNNLLKTTSESRIQISEIFFPSISKWLIVHLVILCFITVLISTVFCKLRSNHKKTIKSVKMKMKMEEENEQLKSMLEQEKTTNRRAKSKLKDHFGQLKAELDFWEARSHAVFIDVNPDCRVLELPVPGTPKVEDTSSEPESLSNPSTVPVLVGKEGFTAGKHYWEVEVDQQQDWVLGVVRETERQEEEGTNAGEDFWALHRSQGELFSSKENSKIEKKSMSYSVIGVLLDLEEAQIKFYEAGQKNIIVKIPLSLGKEHAEIFYPFLPKGEERVVTPVICPVLIPVPLETL
SIO_010081: LOC116500177
subclass of: SO_0000673
so part of: LOC116500177
location: complement(join(605390..605931,606451..606477,607616..607636,608779..608805,609627..609653,610120..610146,610749..610775,611801..611827,612200..612298,613720..614004,615140..615490,616774..616846))
location: region:605390-616846:-1
so has part: feature:616774-616846:-1:exon
so has part: feature:615140-615490:-1:exon
so has part: feature:613720-614004:-1:exon
so has part: feature:612200-612298:-1:exon
so has part: feature:611801-611827:-1:exon
so has part: feature:610749-610775:-1:exon
so has part: feature:610120-610146:-1:exon
so has part: feature:609627-609653:-1:exon
so has part: feature:608779-608805:-1:exon
so has part: feature:607616-607636:-1:exon
so has part: feature:606451-606477:-1:exon
so has part: feature:605390-605931:-1:exon

XP_032060984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:616774-616846:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615140-615490:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:613720-614004:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:612200-612298:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:611801-611827:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:610749-610775:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:610120-610146:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:609627-609653:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:608779-608805:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:607616-607636:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:606451-606477:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:605390-605931:-1:exon

LOC116500179
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500179
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 626841..638076
location: region:626841-638076:1
so has part: feature:626841-638076:1:exon
subclass of: SO_0000010

116500179
type: Gene
SIO_000068: ncbigene

position:626841:1
position: 626841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638076:1
position: 638076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626841-638076:1:exon

LOC116500179
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500179
product: butyrophilin subfamily 3 member A2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_032205094.1
SIO_010081: LOC116500179
subclass of: SO_0000673
so part of: LOC116500179
location: join(626841..626913,629429..629785,631123..631407,632334..632432,632827..632853,636220..636246,637538..638076)
location: region:626841-638076:1
so has part: feature:626841-626913:1:exon
so has part: feature:629429-629785:1:exon
so has part: feature:631123-631407:1:exon
so has part: feature:632334-632432:1:exon
so has part: feature:632827-632853:1:exon
so has part: feature:636220-636246:1:exon
so has part: feature:637538-638076:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:626841-626913:1:exon

position:626913:1
position: 626913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:629429-629785:1:exon

position:629429:1
position: 629429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629785:1
position: 629785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:631123-631407:1:exon

position:631123:1
position: 631123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631407:1
position: 631407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:632334-632432:1:exon

position:632334:1
position: 632334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632432:1
position: 632432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:632827-632853:1:exon

position:632827:1
position: 632827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632853:1
position: 632853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:636220-636246:1:exon

position:636220:1
position: 636220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636246:1
position: 636246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:637538-638076:1:exon

position:637538:1
position: 637538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500179
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500179
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 3 member A2-like
translation: MGSRFQYAMTPHIIIFLQIAHLVTGQFKIIPPDNPVIGVIGKGVTLPCQLEAKTTPERLFVQWIFIGKSQRIFVTTYDGKNKQNPISEDETYQGRTNFFQTEFNKGNMSLHLKNVMLSDEGKYTCNIFLENWYDEVVVDLNVAAKGDDTSIFLDGHVGQGIGLTCKSQGWFPEPEVVWLDSKGQTRKEKVITQRTKTSSGIFDVVTSMNLEPGSDKEVSCRIVNNLLNTVCESRVLISDVFFPSTSPWMTAFIAILCFSIAVIAAVGAKLRVNTTRRQKADFWEAQSHAVFIDVNPDCRVLELPVPGAPKVEDTSSEPAGLSSPSTVPVLVGKEGFAAGKHYWEVEVDQQQDWVLGVVREKERQEEEGTNAGEDFWALHRSQGELFSSKENSKIEKKNMSCSVIGVLLDLEEAQVKFYEAGQKNIIVKIPLSLGKEHAEMFYPFLSKEKGTVKPVCHQQKIPVPLKAL
SIO_010081: LOC116500179
subclass of: SO_0000673
so part of: LOC116500179
location: join(626841..626913,629429..629785,631123..631407,632334..632432,632827..632853,636220..636246,637538..638076)
location: region:626841-638076:1
so has part: feature:626841-626913:1:exon
so has part: feature:629429-629785:1:exon
so has part: feature:631123-631407:1:exon
so has part: feature:632334-632432:1:exon
so has part: feature:632827-632853:1:exon
so has part: feature:636220-636246:1:exon
so has part: feature:637538-638076:1:exon

XP_032060985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:626841-626913:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:629429-629785:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:631123-631407:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:632334-632432:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:632827-632853:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:636220-636246:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637538-638076:1:exon

LOC116500165
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500165
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(932155..933093)
location: region:932155-933093:-1
so has part: feature:932155-933093:-1:exon
subclass of: SO_0000011

116500165
type: Gene
SIO_000068: ncbigene

position:932155:-1
position: 932155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:933093:-1
position: 933093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:932155-933093:-1:exon

LOC116500165
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116500165
product: uncharacterized LOC116500165
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004254272.1
SIO_010081: LOC116500165
subclass of: SO_0000673
so part of: LOC116500165
location: complement(join(932155..932434,933033..933093))
location: region:932155-933093:-1
so has part: feature:933033-933093:-1:exon
so has part: feature:932155-932434:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:933033-933093:-1:exon

position:933033:-1
position: 933033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:932155-932434:-1:exon

position:932434:-1
position: 932434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500180
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500180
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 954671..956663
location: region:954671-956663:1
so has part: feature:954671-956663:1:exon
subclass of: SO_0000010

116500180
type: Gene
SIO_000068: ncbigene

position:954671:1
position: 954671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:956663:1
position: 956663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:954671-956663:1:exon

LOC116500180
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500180
product: protein phosphatase 1 regulatory subunit 15A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 71% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032205095.1
SIO_010081: LOC116500180
subclass of: SO_0000673
so part of: LOC116500180
location: join(954671..954723,955364..955714,956322..956663)
location: region:954671-956663:1
so has part: feature:954671-954723:1:exon
so has part: feature:955364-955714:1:exon
so has part: feature:956322-956663:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:954671-954723:1:exon

position:954723:1
position: 954723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:955364-955714:1:exon

position:955364:1
position: 955364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:955714:1
position: 955714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:956322-956663:1:exon

position:956322:1
position: 956322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500180
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 15A-like
translation: MTMAPPGSAPPMVAEDPLRPPLLQDLFYRPEPDEDDDDQGWDGDPPSEGDPPGDGTPPEGDGTPPKDEGAPPEGDGSPLEDKRAPPEDNGDPQKNNGAPPEEKGTPSKPETPPRVPKKVRFSPEVRVLPLPPWPDAAARRGPWETLARDRLRFARRCALLAPLLQPLFAPPHRQRVWERLQLGGAPCDPHPEGDPSPDPLPLKEPLQEPPSLRDPPQDTPARREPPRDPPH
SIO_010081: LOC116500180
subclass of: SO_0000673
so part of: LOC116500180
location: join(954721..954723,955364..955714,956322..956663)
location: region:954721-956663:1
so has part: feature:954721-954723:1:exon
so has part: feature:955364-955714:1:exon
so has part: feature:956322-956663:1:exon

XP_032060986.1
type: Protein
SIO_000068: ncbiprotein

position:954721:1
position: 954721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:954721-954723:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:955364-955714:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:956322-956663:1:exon

LOC116500164
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500164
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1048438..1049376)
location: region:1048438-1049376:-1
so has part: feature:1048438-1049376:-1:exon
subclass of: SO_0000011

116500164
type: Gene
SIO_000068: ncbigene

position:1048438:-1
position: 1048438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1049376:-1
position: 1049376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1048438-1049376:-1:exon

LOC116500164
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116500164
product: uncharacterized LOC116500164
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004254271.1
SIO_010081: LOC116500164
subclass of: SO_0000673
so part of: LOC116500164
location: complement(join(1048438..1048717,1049316..1049376))
location: region:1048438-1049376:-1
so has part: feature:1049316-1049376:-1:exon
so has part: feature:1048438-1048717:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1049316-1049376:-1:exon

position:1049316:-1
position: 1049316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1048438-1048717:-1:exon

position:1048717:-1
position: 1048717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500159
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500159
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1066984..1069871
location: region:1066984-1069871:1
so has part: feature:1066984-1069871:1:exon
subclass of: SO_0000010

116500159
type: Gene
SIO_000068: ncbigene

position:1066984:1
position: 1066984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1069871:1
position: 1069871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1066984-1069871:1:exon

LOC116500159
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500159
product: zinc finger and SCAN domain-containing protein 22-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205078.1
SIO_010081: LOC116500159
subclass of: SO_0000673
so part of: LOC116500159
location: join(1066984..1067439,1068590..1068776,1069090..1069871)
location: region:1066984-1069871:1
so has part: feature:1066984-1067439:1:exon
so has part: feature:1068590-1068776:1:exon
so has part: feature:1069090-1069871:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1066984-1067439:1:exon

position:1067439:1
position: 1067439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1068590-1068776:1:exon

position:1068590:1
position: 1068590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1068776:1
position: 1068776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1069090-1069871:1:exon

position:1069090:1
position: 1069090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500159
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500159
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and SCAN domain-containing protein 22-like
translation: MEPSPLRPRWRLLQPGGTRLVPTPRGGVIGGVVGVGGGAGTELRRLRFRQFRYQEATGPGDACRRLRELSRGWLRPEALSKEEMLELLVLEQFLSILPEDIQSWVWVRHPESCAQAVALAESFQPGRRDGGGWEQQVTVRVKVEEVAPGDAEDPEVVLDPPAEPPQTPPGEGWRGEAAWSKVKFDPEEDEEEENQRETGPTVASGEQEDPASPPQAPPRPLPGTLQADSIGTPVQTETPPQTETPQQPRGTPGAPLPQQPPPPGPAEGTESPEKAPWAKRAPGKERPYPCGECGKSFGRLTHLKTHQRTHTGVKPYACGACGKSFGHLSTLTTHQRLHTGERPYGCGACGKTFTNPSDLNKHQRSHTGERPYPCAACGKRFSQQSNLTMHRRSHTQERPYPCGACGKSFKYLADLTVHERSHTGERPFPCAHCGKSFSNKSSLARHTRIHARAAARDK
SIO_010081: LOC116500159
subclass of: SO_0000673
so part of: LOC116500159
location: join(1067032..1067439,1068590..1068776,1069090..1069871)
location: region:1067032-1069871:1
so has part: feature:1067032-1067439:1:exon
so has part: feature:1068590-1068776:1:exon
so has part: feature:1069090-1069871:1:exon

XP_032060969.1
type: Protein
SIO_000068: ncbiprotein

position:1067032:1
position: 1067032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1067032-1067439:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1068590-1068776:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1069090-1069871:1:exon

LOC116500181
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500181
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1074689..1076436)
location: region:1074689-1076436:-1
so has part: feature:1074689-1076436:-1:exon
subclass of: SO_0000010

116500181
type: Gene
SIO_000068: ncbigene

position:1074689:-1
position: 1074689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1076436:-1
position: 1076436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1074689-1076436:-1:exon

LOC116500181
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500181
product: natterin-3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 88% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032205096.1
SIO_010081: LOC116500181
subclass of: SO_0000673
so part of: LOC116500181
location: complement(join(1074689..1075698,1075929..1076025,1076359..1076436))
location: region:1074689-1076436:-1
so has part: feature:1076359-1076436:-1:exon
so has part: feature:1075929-1076025:-1:exon
so has part: feature:1074689-1075698:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1076359-1076436:-1:exon

position:1076359:-1
position: 1076359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1075929-1076025:-1:exon

position:1075929:-1
position: 1075929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1076025:-1
position: 1076025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1074689-1075698:-1:exon

position:1075698:-1
position: 1075698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500181
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500181
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: natterin-3-like
translation: MLTYKPCLVAALLFLVQAGADGAPGSPPVGRKLLQHLGTSWNLNEKAEGKERPSHLEWVDFDGTLPADTVSNWNNYTKMMEYVCSTEEDGCNTGAYVPSRGPFCFYAFWQSEHRVSKFKLLVNRGNLEALCWVDDSFGDVPENAVEGCPSVDIYVGRNQYGLGKVSKDQRAFFVVVDHEEVWFKWYQVLAVQTGPADVTISDVRYNTSEAVGRGEDVTLTKTTVKNEGCRGTREEVALEEAAVVMHDWELDQKVFSTIHGALRAAPLAFNGTSWEATNVTRVNWVGRATTGEYVVHTRNVKVQMRPRTTCTVALVGRQLDVRVPFTACLTRDFGDGQLHRVAVTGVARSRAVVDVQAGVEQCSPLAGSSPCRG
SIO_010081: LOC116500181
subclass of: SO_0000673
so part of: LOC116500181
location: complement(join(1074689..1075698,1075929..1076025,1076359..1076373))
location: region:1074689-1076373:-1
so has part: feature:1076359-1076373:-1:exon
so has part: feature:1075929-1076025:-1:exon
so has part: feature:1074689-1075698:-1:exon

XP_032060987.1
type: Protein
SIO_000068: ncbiprotein

position:1076373:-1
position: 1076373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1076359-1076373:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1075929-1076025:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1074689-1075698:-1:exon

CHMP2A
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: CHMP2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1076497..1085999)
location: region:1076497-1085999:-1
so has part: feature:1076497-1085999:-1:exon
subclass of: SO_0000010

116500161
type: Gene
SIO_000068: ncbigene

position:1076497:-1
position: 1076497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1085999:-1
position: 1085999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1076497-1085999:-1:exon

CHMP2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: CHMP2A
product: charged multivesicular body protein 2A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205080.1
SIO_010081: CHMP2A
subclass of: SO_0000673
so part of: CHMP2A
location: complement(join(1076497..1078349,1078600..1078661,1080149..1080279,1082281..1082460,1083509..1083690,1085932..1085999))
location: region:1076497-1085999:-1
so has part: feature:1085932-1085999:-1:exon
so has part: feature:1083509-1083690:-1:exon
so has part: feature:1082281-1082460:-1:exon
so has part: feature:1080149-1080279:-1:exon
so has part: feature:1078600-1078661:-1:exon
so has part: feature:1076497-1078349:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1085932-1085999:-1:exon

position:1085932:-1
position: 1085932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1083509-1083690:-1:exon

position:1083509:-1
position: 1083509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1083690:-1
position: 1083690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1082281-1082460:-1:exon

position:1082281:-1
position: 1082281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1082460:-1
position: 1082460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1080149-1080279:-1:exon

position:1080149:-1
position: 1080149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080279:-1
position: 1080279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1078600-1078661:-1:exon

position:1078600:-1
position: 1078600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1078661:-1
position: 1078661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1076497-1078349:-1:exon

position:1078349:-1
position: 1078349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHMP2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: CHMP2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: charged multivesicular body protein 2a
translation: MDLLFGRRKTPEELLRQNQRALTRAMRELDRERQKLEAQEKKIIIDIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFITMRANVQAVSLKIQTLKSNNSMAQAMKGVTKAMATMNRQLKLPQIQKIMMEFEKQAEIMDMKEELMNDAIDDAMGDEDDEEESDAVVSQVLDELGLTLTDELATLPTPGGSLAAGEGRAAEAAAALADADADLEERLKNLRRD
SIO_010081: CHMP2A
subclass of: SO_0000673
so part of: CHMP2A
location: complement(join(1078228..1078349,1078600..1078661,1080149..1080279,1082281..1082460,1083509..1083676))
location: region:1078228-1083676:-1
so has part: feature:1083509-1083676:-1:exon
so has part: feature:1082281-1082460:-1:exon
so has part: feature:1080149-1080279:-1:exon
so has part: feature:1078600-1078661:-1:exon
so has part: feature:1078228-1078349:-1:exon

XP_032060971.1
type: Protein
SIO_000068: ncbiprotein

position:1078228:-1
position: 1078228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1083676:-1
position: 1083676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1083509-1083676:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1082281-1082460:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1080149-1080279:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1078600-1078661:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1078228-1078349:-1:exon

UBE2M
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: UBE2M
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1087688..1095820)
location: region:1087688-1095820:-1
so has part: feature:1087688-1095820:-1:exon
subclass of: SO_0000010

116500160
type: Gene
SIO_000068: ncbigene

position:1087688:-1
position: 1087688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1095820:-1
position: 1095820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1087688-1095820:-1:exon

UBE2M
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: UBE2M
product: ubiquitin conjugating enzyme E2 M
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205079.1
SIO_010081: UBE2M
subclass of: SO_0000673
so part of: UBE2M
location: complement(join(1087688..1087872,1090409..1090472,1090700..1090803,1092316..1092354,1093351..1093445,1095383..1095820))
location: region:1087688-1095820:-1
so has part: feature:1095383-1095820:-1:exon
so has part: feature:1093351-1093445:-1:exon
so has part: feature:1092316-1092354:-1:exon
so has part: feature:1090700-1090803:-1:exon
so has part: feature:1090409-1090472:-1:exon
so has part: feature:1087688-1087872:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1095383-1095820:-1:exon

position:1095383:-1
position: 1095383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1093351-1093445:-1:exon

position:1093351:-1
position: 1093351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1093445:-1
position: 1093445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1092316-1092354:-1:exon

position:1092316:-1
position: 1092316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1092354:-1
position: 1092354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1090700-1090803:-1:exon

position:1090700:-1
position: 1090700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090803:-1
position: 1090803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1090409-1090472:-1:exon

position:1090409:-1
position: 1090409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090472:-1
position: 1090472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1087688-1087872:-1:exon

position:1087872:-1
position: 1087872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBE2M
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: UBE2M
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD8-conjugating enzyme Ubc12
translation: MIKLFSLKQQKKEEESAGGTKGTSKKASAAQLRIQKDINELNLPKTCEIDFSDQDDLLHFRLLICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQSNRRLFEQNVQRSLRGGYVGATYFERCLK
SIO_010081: UBE2M
subclass of: SO_0000673
so part of: UBE2M
location: complement(join(1087732..1087872,1090409..1090472,1090700..1090803,1092316..1092354,1093351..1093445,1095383..1095491))
location: region:1087732-1095491:-1
so has part: feature:1095383-1095491:-1:exon
so has part: feature:1093351-1093445:-1:exon
so has part: feature:1092316-1092354:-1:exon
so has part: feature:1090700-1090803:-1:exon
so has part: feature:1090409-1090472:-1:exon
so has part: feature:1087732-1087872:-1:exon

XP_032060970.1
type: Protein
SIO_000068: ncbiprotein

position:1087732:-1
position: 1087732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1095491:-1
position: 1095491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1095383-1095491:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1093351-1093445:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1092316-1092354:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1090700-1090803:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1090409-1090472:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1087732-1087872:-1:exon

LOC116500182
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1095716..1096477)
location: region:1095716-1096477:-1
so has part: feature:1095716-1096477:-1:exon
subclass of: SO_0000010

116500182
type: Gene
SIO_000068: ncbigene

position:1095716:-1
position: 1095716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1096477:-1
position: 1096477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1095716-1096477:-1:exon

LOC116500182
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500182
product: pollen-specific leucine-rich repeat extensin-like protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 70% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205098.1
SIO_010081: LOC116500182
subclass of: SO_0000673
so part of: LOC116500182
location: complement(join(1095716..1095751,1095814..1096229,1096310..1096477))
location: region:1095716-1096477:-1
so has part: feature:1096310-1096477:-1:exon
so has part: feature:1095814-1096229:-1:exon
so has part: feature:1095716-1095751:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1096310-1096477:-1:exon

position:1096310:-1
position: 1096310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1095814-1096229:-1:exon

position:1095814:-1
position: 1095814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1096229:-1
position: 1096229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1095716-1095751:-1:exon

position:1095751:-1
position: 1095751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500182
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pollen-specific leucine-rich repeat extensin-like protein 1
translation: MAAPTRGQRGPALPLAPAEPIIAPQTSSPPRDWLVDKGRGGGKSRSFPERHEGGGEPERAELLPETAEGKTPERVPFLPAEPEALRGPSRTLSGNLRSPPNPPQASFRRIPKPFRKNPKSFRRAPKPFRRDPKQLPENPEELPEIPEAPSVESRSSSGDTRSLFPERAEKALPEVPEEPRNPRGTSRRSPNPSVNPEPLP
SIO_010081: LOC116500182
subclass of: SO_0000673
so part of: LOC116500182
location: complement(join(1095733..1095751,1095814..1096229,1096310..1096477))
location: region:1095733-1096477:-1
so has part: feature:1096310-1096477:-1:exon
so has part: feature:1095814-1096229:-1:exon
so has part: feature:1095733-1095751:-1:exon

XP_032060989.1
type: Protein
SIO_000068: ncbiprotein

position:1095733:-1
position: 1095733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1096310-1096477:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1095814-1096229:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1095733-1095751:-1:exon

TRIM28
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRIM28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1096875..>1106159)
location: region:1096875-1106159:-1
so has part: feature:1096875-1106159:-1:exon
subclass of: SO_0000010

116500183
type: Gene
SIO_000068: ncbigene

position:1096875:-1
position: 1096875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1106159:-1
position: 1106159
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1096875-1106159:-1:exon

TRIM28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: TRIM28
product: tripartite motif containing 28
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032205099.1
SIO_010081: TRIM28
subclass of: SO_0000673
so part of: TRIM28
location: complement(join(1096875..1097107,1097207..1097341,1097428..1097502,1097597..1097714,1098469..1098718,1098809..1099029,1099491..1099550,1099700..1099742,1099844..1100093,1100208..1100293,1100384..1100498,1102248..1102394,1102478..1102592,1102735..1102851,1103869..1104004,1104240..1104372,1104447..1104559,1105961..>1106159))
location: region:1096875-1106159:-1
so has part: feature:1105961-1106159:-1:exon
so has part: feature:1104447-1104559:-1:exon
so has part: feature:1104240-1104372:-1:exon
so has part: feature:1103869-1104004:-1:exon
so has part: feature:1102735-1102851:-1:exon
so has part: feature:1102478-1102592:-1:exon
so has part: feature:1102248-1102394:-1:exon
so has part: feature:1100384-1100498:-1:exon
so has part: feature:1100208-1100293:-1:exon
so has part: feature:1099844-1100093:-1:exon
so has part: feature:1099700-1099742:-1:exon
so has part: feature:1099491-1099550:-1:exon
so has part: feature:1098809-1099029:-1:exon
so has part: feature:1098469-1098718:-1:exon
so has part: feature:1097597-1097714:-1:exon
so has part: feature:1097428-1097502:-1:exon
so has part: feature:1097207-1097341:-1:exon
so has part: feature:1096875-1097107:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1105961-1106159:-1:exon

position:1105961:-1
position: 1105961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1104447-1104559:-1:exon

position:1104447:-1
position: 1104447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104559:-1
position: 1104559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1104240-1104372:-1:exon

position:1104240:-1
position: 1104240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104372:-1
position: 1104372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1103869-1104004:-1:exon

position:1103869:-1
position: 1103869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104004:-1
position: 1104004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1102735-1102851:-1:exon

position:1102735:-1
position: 1102735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1102851:-1
position: 1102851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1102478-1102592:-1:exon

position:1102478:-1
position: 1102478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1102592:-1
position: 1102592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1102248-1102394:-1:exon

position:1102248:-1
position: 1102248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1102394:-1
position: 1102394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1100384-1100498:-1:exon

position:1100384:-1
position: 1100384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1100498:-1
position: 1100498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1100208-1100293:-1:exon

position:1100208:-1
position: 1100208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1100293:-1
position: 1100293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1099844-1100093:-1:exon

position:1099844:-1
position: 1099844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1100093:-1
position: 1100093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1099700-1099742:-1:exon

position:1099700:-1
position: 1099700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1099742:-1
position: 1099742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1099491-1099550:-1:exon

position:1099491:-1
position: 1099491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1099550:-1
position: 1099550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1098809-1099029:-1:exon

position:1098809:-1
position: 1098809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1099029:-1
position: 1099029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1098469-1098718:-1:exon

position:1098469:-1
position: 1098469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1098718:-1
position: 1098718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1097597-1097714:-1:exon

position:1097597:-1
position: 1097597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1097714:-1
position: 1097714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1097428-1097502:-1:exon

position:1097428:-1
position: 1097428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1097502:-1
position: 1097502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1097207-1097341:-1:exon

position:1097207:-1
position: 1097207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1097341:-1
position: 1097341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1096875-1097107:-1:exon

position:1097107:-1
position: 1097107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRIM28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: TRIM28
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: transcription intermediary factor 1-beta
translation: GAAAAMSSPAKRPDASDLLERCGGCRERLRAAREPRLLPCLHSLCRQCLQPGPEPAAANGGPSEGAVVNCPVCKQQCYLQDVVENYFLKDSRPEAAADSQASTQCCTSCEDNAPATSFCVECSEPLCETCVEAHQRVKYTKDHTVRAAGNTRAKEGEHAVYCAVHKSEPLVLFCQTCDVLTCRDCQLNTHKDHQYQFLEDAVRNQRKMLATLVKRLGDKHASLQRSTKEVRSSIRQVTDVQKRVQVDVKMAILQIMKELNKRGKVLVSDAQKVTEGQQEKLERQHWAMTKLQRHQEHVLRFTSWALESDNSTALLLSKKLIYFQLHRALKMIVDPVEPQGDMKFKWDPNAWTKSAESFGTIVSERSLPPPPLSPQPPAASPTAGPSQVSPHTTVVSEGQYAPSPLLRPPEGPQIGDKAGGGPPGDPQEGGGGLGTPQLPSGTEELGCPNLSPPHLDPQVTETPRDAGAELAGNSSPEAAVTGTKRRKRGSPPGEEKFVKKLLVKRSHPPGDLGPPLLRKVPRVSLERLELDLAGAAQPPSFRVFPGTTAEEFNLIIIERGGAQPGPPPPPPPPPPAIKEEQQESPIGDVKPPGLPPEHPGVLPPPPTPEIPPPAAAAPPRTSRNVSCCRVCCQAGAVVMCDLCERCYHLDCHLPALHEVPGHDWLCLLCQDPAPPGEDLAPSCPGPTEEQPPALCPTDQRKCEYVLLQLLCHEPWRPLHRLSSSLEGCDAIDLTLIRAKLQGKLSPGYGHPEEFARDVWRMIRQFNRLTEDKADVQSILGLQRFFEERLSAAFGDRKFCAALESLGPLDGAEGSPPPPPTLLAP
SIO_010081: TRIM28
subclass of: SO_0000673
so part of: TRIM28
location: complement(join(1096943..1097107,1097207..1097341,1097428..1097502,1097597..1097714,1098469..1098718,1098809..1099029,1099491..1099550,1099700..1099742,1099844..1100093,1100208..1100293,1100384..1100498,1102248..1102394,1102478..1102592,1102735..1102851,1103869..1104004,1104240..1104372,1104447..1104559,1105961..>1106159))
location: region:1096943-1106159:-1
so has part: feature:1105961-1106159:-1:exon
so has part: feature:1104447-1104559:-1:exon
so has part: feature:1104240-1104372:-1:exon
so has part: feature:1103869-1104004:-1:exon
so has part: feature:1102735-1102851:-1:exon
so has part: feature:1102478-1102592:-1:exon
so has part: feature:1102248-1102394:-1:exon
so has part: feature:1100384-1100498:-1:exon
so has part: feature:1100208-1100293:-1:exon
so has part: feature:1099844-1100093:-1:exon
so has part: feature:1099700-1099742:-1:exon
so has part: feature:1099491-1099550:-1:exon
so has part: feature:1098809-1099029:-1:exon
so has part: feature:1098469-1098718:-1:exon
so has part: feature:1097597-1097714:-1:exon
so has part: feature:1097428-1097502:-1:exon
so has part: feature:1097207-1097341:-1:exon
so has part: feature:1096943-1097107:-1:exon

XP_032060990.1
type: Protein
SIO_000068: ncbiprotein

position:1096943:-1
position: 1096943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1105961-1106159:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1104447-1104559:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1104240-1104372:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1103869-1104004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1102735-1102851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1102478-1102592:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1102248-1102394:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1100384-1100498:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1100208-1100293:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1099844-1100093:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1099700-1099742:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1099491-1099550:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1098809-1099029:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1098469-1098718:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1097597-1097714:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1097428-1097502:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1097207-1097341:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1096943-1097107:-1:exon

LOC116500162
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500162
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1107061..1109313
location: region:1107061-1109313:1
so has part: feature:1107061-1109313:1:exon
subclass of: SO_0000011

116500162
type: Gene
SIO_000068: ncbigene

position:1107061:1
position: 1107061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109313:1
position: 1109313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1107061-1109313:1:exon

LOC116500162
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116500162
product: uncharacterized LOC116500162
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004254270.1
SIO_010081: LOC116500162
subclass of: SO_0000673
so part of: LOC116500162
location: join(1107061..1107457,1107809..1107880,1109244..1109313)
location: region:1107061-1109313:1
so has part: feature:1107061-1107457:1:exon
so has part: feature:1107809-1107880:1:exon
so has part: feature:1109244-1109313:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1107061-1107457:1:exon

position:1107457:1
position: 1107457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1107809-1107880:1:exon

position:1107809:1
position: 1107809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1107880:1
position: 1107880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1109244-1109313:1:exon

position:1109244:1
position: 1109244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500184
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500184
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1109324..1113105
location: region:1109324-1113105:1
so has part: feature:1109324-1113105:1:exon
subclass of: SO_0000010

116500184
type: Gene
SIO_000068: ncbigene

position:1109324:1
position: 1109324
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1113105:1
position: 1113105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1109324-1113105:1:exon

LOC116500184
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500184
product: zinc finger protein 835-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205100.1
SIO_010081: LOC116500184
subclass of: SO_0000673
so part of: LOC116500184
location: join(<1109324..1109847,1111684..1113105)
location: region:1109324-1113105:1
so has part: feature:1109324-1109847:1:exon
so has part: feature:1111684-1113105:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1109324-1109847:1:exon

position:1109847:1
position: 1109847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1111684-1113105:1:exon

position:1111684:1
position: 1111684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116500184
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500184
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 835-like
translation: PPPPPPPPPGPHRCADCGKTFGARSRLAVHRRVHTGERPFACAHCGKRFSQSSALGLHRRLHTGERPHACGECGKAFAVASHLAVHRRVHTGERPFACAHCGKRFSQSSALALHRRGHTGERPHACGDCGKAFAVASHLAAHRRIHTGEKPFPCPRCGKRFRQRSGLVTHQRGHNARKPYKCTECGKAFGQSSHLMRHRSTHTGEKPYKCGACAKSFTQNSNLLQHQRTHTGEKPYECGACGKRFGWSSNLSQHRRLHSGQKPFQCGQCDKRFSESSRLVEHQRTHTGEKPYRCPDCPKTFSRASHLVRHRRLHATQRGPGPALGAVRRGL
SIO_010081: LOC116500184
subclass of: SO_0000673
so part of: LOC116500184
location: join(<1109324..1109847,1111684..1112155)
location: region:1109324-1112155:1
so has part: feature:1109324-1109847:1:exon
so has part: feature:1111684-1112155:1:exon

XP_032060991.1
type: Protein
SIO_000068: ncbiprotein

position:1112155:1
position: 1112155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1109324-1109847:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1111684-1112155:1:exon

ZBTB45
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: ZBTB45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1113164..1116407)
location: region:1113164-1116407:-1
so has part: feature:1113164-1116407:-1:exon
subclass of: SO_0000010

116500163
type: Gene
SIO_000068: ncbigene

position:1113164:-1
position: 1113164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1116407:-1
position: 1116407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1113164-1116407:-1:exon

ZBTB45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ZBTB45
product: zinc finger and BTB domain containing 45
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205082.1
SIO_010081: ZBTB45
subclass of: SO_0000673
so part of: ZBTB45
location: complement(join(1113164..1113742,1115358..1116407))
location: region:1113164-1116407:-1
so has part: feature:1115358-1116407:-1:exon
so has part: feature:1113164-1113742:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1115358-1116407:-1:exon

position:1115358:-1
position: 1115358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1113164-1113742:-1:exon

position:1113742:-1
position: 1113742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZBTB45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: ZBTB45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 45
translation: MAEAVHYIHLQNFSRSLLETLNGQRLGGHFCDVTVRIREATLRAHRCVLAAGSPFFHDKLLLGHSAIEVPPVVPSGAVRQLVEFMYSGCLVVAQSEALQILTAASILQIKTVIDECTQIISQSRGPKVLPPARPPPPPPPPPAAAAARRKLRELLGPPPEPEGYLGPPSCHSRKQRQPLRLQLPVKEEEEEEEEEAVVGVDEEGSVPPAPFPAEEPPFFGAPEVFSDAFLPPWPGEDGGKVGPECGLEASGRGSAFGAEVAPAGNSLGFAPAVPPLYEEGSTEEGTSGGIPSVPKVPRAGPSRRPEPSYQCGHCQKTFSSRKNYTKHMFIHSGEKPHQCSICWRSFSLRDYLLKHMVTHTGVRAFQCSVCCKRFTQKSSLNVHMRTHRTERFQCRLCTKGFSHRTLLERHAAATHPVPPPGPPPGPPPP
SIO_010081: ZBTB45
subclass of: SO_0000673
so part of: ZBTB45
location: complement(join(1113450..1113742,1115358..1116354))
location: region:1113450-1116354:-1
so has part: feature:1115358-1116354:-1:exon
so has part: feature:1113450-1113742:-1:exon

XP_032060973.1
type: Protein
SIO_000068: ncbiprotein

position:1113450:-1
position: 1113450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1116354:-1
position: 1116354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1115358-1116354:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1113450-1113742:-1:exon

THAP7
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: THAP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1131962..1136166
location: region:1131962-1136166:1
so has part: feature:1131962-1136166:1:exon
subclass of: SO_0000010

116500191
type: Gene
SIO_000068: ncbigene

position:1131962:1
position: 1131962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1136166:1
position: 1136166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1131962-1136166:1:exon

THAP7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: THAP7
product: THAP domain containing 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032205108.1
SIO_010081: THAP7
subclass of: SO_0000673
so part of: THAP7
location: join(1131962..1131985,1132926..1133005,1134489..1134644,1135315..1135455,1135555..1136166)
location: region:1131962-1136166:1
so has part: feature:1131962-1131985:1:exon
so has part: feature:1132926-1133005:1:exon
so has part: feature:1134489-1134644:1:exon
so has part: feature:1135315-1135455:1:exon
so has part: feature:1135555-1136166:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1131962-1131985:1:exon

position:1131985:1
position: 1131985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1132926-1133005:1:exon

position:1132926:1
position: 1132926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1133005:1
position: 1133005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1134489-1134644:1:exon

position:1134489:1
position: 1134489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1134644:1
position: 1134644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1135315-1135455:1:exon

position:1135315:1
position: 1135315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1135455:1
position: 1135455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1135555-1136166:1:exon

position:1135555:1
position: 1135555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

THAP7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: THAP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: THAP domain-containing protein 7
translation: MPRHCSAAGCCTRDTRETRNRGISFHRLPKKDNPRRALWLENSRRRDASGEGRWDPASKYIYFCSQHFEKSCFEIVGFSGYHRLKEGAVPTVFESTSPKTPRDTKPKLPPPDSDTPKPPRATGKWKQDPATSPPDPPFSSDVSCFPREGEDPGGVPALPGPLGARGPLPDTLLVATGDEEATDTPALPEGAPPAPPRPVSPSLYMLRLPPPAGAYIQSEHSYQVGSALLWKRRAEAALDALDKAQRQLQACKRREQRLRLRVGELQRERRAPPEGRRVPKEPPPQGAEPQVPGAADGGR
SIO_010081: THAP7
subclass of: SO_0000673
so part of: THAP7
location: join(1132926..1133005,1134489..1134644,1135315..1135455,1135555..1136077)
location: region:1132926-1136077:1
so has part: feature:1132926-1133005:1:exon
so has part: feature:1134489-1134644:1:exon
so has part: feature:1135315-1135455:1:exon
so has part: feature:1135555-1136077:1:exon

XP_032060999.1
type: Protein
SIO_000068: ncbiprotein

position:1136077:1
position: 1136077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1132926-1133005:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1134489-1134644:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1135315-1135455:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1135555-1136077:1:exon

SLC27A5
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: SLC27A5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1136842..1144112)
location: region:1136842-1144112:-1
so has part: feature:1136842-1144112:-1:exon
subclass of: SO_0000010

116500195
type: Gene
SIO_000068: ncbigene

position:1136842:-1
position: 1136842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1144112:-1
position: 1144112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1136842-1144112:-1:exon

SLC27A5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SLC27A5
product: solute carrier family 27 member 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 4% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205112.1
SIO_010081: SLC27A5
subclass of: SO_0000673
so part of: SLC27A5
location: complement(join(1136842..1137018,1137451..1137581,1138335..1138432,1138533..1138731,1138955..1139045,1139825..1140019,1140095..1140219,1141083..1141241,1141621..1141830,1143632..1144112))
location: region:1136842-1144112:-1
so has part: feature:1143632-1144112:-1:exon
so has part: feature:1141621-1141830:-1:exon
so has part: feature:1141083-1141241:-1:exon
so has part: feature:1140095-1140219:-1:exon
so has part: feature:1139825-1140019:-1:exon
so has part: feature:1138955-1139045:-1:exon
so has part: feature:1138533-1138731:-1:exon
so has part: feature:1138335-1138432:-1:exon
so has part: feature:1137451-1137581:-1:exon
so has part: feature:1136842-1137018:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1143632-1144112:-1:exon

position:1143632:-1
position: 1143632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1141621-1141830:-1:exon

position:1141621:-1
position: 1141621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1141830:-1
position: 1141830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1141083-1141241:-1:exon

position:1141083:-1
position: 1141083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1141241:-1
position: 1141241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1140095-1140219:-1:exon

position:1140095:-1
position: 1140095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1140219:-1
position: 1140219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1139825-1140019:-1:exon

position:1139825:-1
position: 1139825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1140019:-1
position: 1140019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1138955-1139045:-1:exon

position:1138955:-1
position: 1138955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1139045:-1
position: 1139045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1138533-1138731:-1:exon

position:1138533:-1
position: 1138533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1138731:-1
position: 1138731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1138335-1138432:-1:exon

position:1138335:-1
position: 1138335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1138432:-1
position: 1138432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1137451-1137581:-1:exon

position:1137451:-1
position: 1137451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1137581:-1
position: 1137581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1136842-1137018:-1:exon

position:1137018:-1
position: 1137018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC27A5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SLC27A5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bile acyl-CoA synthetase
translation: MLGVVTAAVAGLLLLLLLLRDRLFPFLWEDLGAFLALGGAAARCHRRLSRRPAVTLLEVFQEHARRQPHRPLLLFQDDVYTYRDVEQRSSRAAHAFSQRLGLKPGQTVAVFLPNEPTYVWTWLALAKLGCSMACLNCNVRGQALLHALAAAQATFVLASTELQDALEEVLPALQRDGIKVFYLSSKSPTPGVEALLPAIEAASDKPLPSHYRAGITATSKAIYIYTSGTTGLPKAAVITEQKLLMVASLGRICGIRGTDHVYTTLPLYHSAGLLIGVGGCLEMGATCVLRSKFSASQFWDDCRRYNVTVIQYVGELMRYLCNTPKRDNDQKHGVRLAVGNGLRAEVWKEFLQRFGPISIWEFYGATEGNAGFINYTGKIGAVGRANPFLKSFAPFELIKYNVEEDEPVRDERGLCIRVRPGETGLLVIKITKNTPFYGYAGDSKKTEKKILRDVLVKGDAFFNSGDLLMMDHEKFVYFQDRVGDTFRWKGENVATTEVEATLAMVNFIQEVNVYGVSVPGCEGKCGMAAIRLKPGMSFEGENLYAFTKETLPSYAAPRFVRIQEALEITGTFKQCKGNLVREGFDPNIIKDPLFFRDEKKKSYVPMNTDIYAAIQEAKINL
SIO_010081: SLC27A5
subclass of: SO_0000673
so part of: SLC27A5
location: complement(join(1136842..1137018,1137451..1137581,1138335..1138432,1138533..1138731,1138955..1139045,1139825..1140019,1140095..1140219,1141083..1141241,1141621..1141830,1143632..1144112))
location: region:1136842-1144112:-1
so has part: feature:1143632-1144112:-1:exon
so has part: feature:1141621-1141830:-1:exon
so has part: feature:1141083-1141241:-1:exon
so has part: feature:1140095-1140219:-1:exon
so has part: feature:1139825-1140019:-1:exon
so has part: feature:1138955-1139045:-1:exon
so has part: feature:1138533-1138731:-1:exon
so has part: feature:1138335-1138432:-1:exon
so has part: feature:1137451-1137581:-1:exon
so has part: feature:1136842-1137018:-1:exon

XP_032061003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1143632-1144112:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1141621-1141830:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1141083-1141241:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1140095-1140219:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1139825-1140019:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1138955-1139045:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1138533-1138731:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1138335-1138432:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1137451-1137581:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1136842-1137018:-1:exon

LOC116500185
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500185
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1147169..1149316)
location: region:1147169-1149316:-1
so has part: feature:1147169-1149316:-1:exon
subclass of: SO_0000010

116500185
type: Gene
SIO_000068: ncbigene

position:1147169:-1
position: 1147169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149316:-1
position: 1149316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1147169-1149316:-1:exon

LOC116500185
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500185
product: leukocyte immunoglobulin-like receptor subfamily A member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 262 Proteins
transcript id: XM_032205101.1
SIO_010081: LOC116500185
subclass of: SO_0000673
so part of: LOC116500185
location: complement(join(1147169..1147318,1147778..1147815,1148113..1148241,1148391..1148702,1148800..1149075,1149169..1149204,1149286..1149316))
location: region:1147169-1149316:-1
so has part: feature:1149286-1149316:-1:exon
so has part: feature:1149169-1149204:-1:exon
so has part: feature:1148800-1149075:-1:exon
so has part: feature:1148391-1148702:-1:exon
so has part: feature:1148113-1148241:-1:exon
so has part: feature:1147778-1147815:-1:exon
so has part: feature:1147169-1147318:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1149286-1149316:-1:exon

position:1149286:-1
position: 1149286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1149169-1149204:-1:exon

position:1149169:-1
position: 1149169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149204:-1
position: 1149204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1148800-1149075:-1:exon

position:1148800:-1
position: 1148800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149075:-1
position: 1149075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1148391-1148702:-1:exon

position:1148391:-1
position: 1148391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1148702:-1
position: 1148702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1148113-1148241:-1:exon

position:1148113:-1
position: 1148113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1148241:-1
position: 1148241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1147778-1147815:-1:exon

position:1147778:-1
position: 1147778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1147815:-1
position: 1147815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1147169-1147318:-1:exon

position:1147318:-1
position: 1147318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116500185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500185
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leukocyte immunoglobulin-like receptor subfamily A member 2
translation: MAPMVVAFILSWWLAARSRAQHPRQPLLSLHPCNRVALGDNVTLRCHLPRPALQVLLYQNEAWIQHQYSTGEQNTAEFVFEAIEWGHMGTYRCQYEDKERKMSALSDPVELLVTDDTYPPPGTMLSPSRRVETGTNVTIQCWASHGATFLLHRDGCSPPTQRQDPHEGAMATFPLLGVTPADAGTYRCSYSPHGYPFLSSPLGDKVTLEVTPASGAPQGTEGGSRRTLLVAVGGGCAAAAALIFSLGLFFLLTTRRHRTRSGAFPQGLGATELQVPPRVLWPQEDSECLTYADLRPPAPSPPRVLAAPQPPIIYAEVGAGGPH
SIO_010081: LOC116500185
subclass of: SO_0000673
so part of: LOC116500185
location: complement(join(1147169..1147318,1147778..1147815,1148113..1148241,1148391..1148702,1148800..1149075,1149169..1149204,1149286..1149316))
location: region:1147169-1149316:-1
so has part: feature:1149286-1149316:-1:exon
so has part: feature:1149169-1149204:-1:exon
so has part: feature:1148800-1149075:-1:exon
so has part: feature:1148391-1148702:-1:exon
so has part: feature:1148113-1148241:-1:exon
so has part: feature:1147778-1147815:-1:exon
so has part: feature:1147169-1147318:-1:exon

XP_032060992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1149286-1149316:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1149169-1149204:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1148800-1149075:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1148391-1148702:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1148113-1148241:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1147778-1147815:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1147169-1147318:-1:exon

TRNAQ-CUG
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAQ-CUG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1149835..1149906)
location: region:1149835-1149906:-1
so has part: feature:1149835-1149906:-1:exon
subclass of: SO_0000663

116500205
type: Gene
SIO_000068: ncbigene

position:1149835:-1
position: 1149835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149906:-1
position: 1149906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1149835-1149906:-1:exon

TRNAQ-CUG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAQ-CUG
product: tRNA-Gln
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamine (anticodon CUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1149871..1149873),aa:Gln, seq:ctg)
SIO_010081: TRNAQ-CUG
subclass of: SO_0000673
so part of: TRNAQ-CUG
location: complement(1149835..1149906)
location: region:1149835-1149906:-1
so has part: feature:1149835-1149906:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1149835-1149906:-1:exon

TRNAK-UUU
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAK-UUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1150072..1150144)
location: region:1150072-1150144:-1
so has part: feature:1150072-1150144:-1:exon
subclass of: SO_0000663

116500197
type: Gene
SIO_000068: ncbigene

position:1150072:-1
position: 1150072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1150144:-1
position: 1150144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1150072-1150144:-1:exon

TRNAK-UUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAK-UUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon UUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1150109..1150111),aa:Lys, seq:ttt)
SIO_010081: TRNAK-UUU
subclass of: SO_0000673
so part of: TRNAK-UUU
location: complement(1150072..1150144)
location: region:1150072-1150144:-1
so has part: feature:1150072-1150144:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1150072-1150144:-1:exon

LOC116500193
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500193
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1151295..1151828
location: region:1151295-1151828:1
so has part: feature:1151295-1151828:1:exon
subclass of: SO_0000010

116500193
type: Gene
SIO_000068: ncbigene

position:1151295:1
position: 1151295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1151828:1
position: 1151828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1151295-1151828:1:exon

LOC116500193
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500193
product: histone H2A type 2-C-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 80 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205111.1
SIO_010081: LOC116500193
subclass of: SO_0000673
so part of: LOC116500193
location: 1151295..1151828
location: region:1151295-1151828:1
so has part: feature:1151295-1151828:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1151295-1151828:1:exon

LOC116500193
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500193
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2A type 2-C-like
translation: MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVMEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTESHKAKGK
SIO_010081: LOC116500193
subclass of: SO_0000673
so part of: LOC116500193
location: 1151295..1151684
location: region:1151295-1151684:1
so has part: feature:1151295-1151684:1:exon

XP_032061002.1
type: Protein
SIO_000068: ncbiprotein

position:1151684:1
position: 1151684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1151295-1151684:1:exon

LOC116500192
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116500192
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1153619..1154354)
location: region:1153619-1154354:-1
so has part: feature:1153619-1154354:-1:exon
subclass of: SO_0000010

116500192
type: Gene
SIO_000068: ncbigene

position:1153619:-1
position: 1153619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1154354:-1
position: 1154354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1153619-1154354:-1:exon

LOC116500192
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116500192
product: histone H2B 5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 69 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032205110.1
SIO_010081: LOC116500192
subclass of: SO_0000673
so part of: LOC116500192
location: complement(1153619..1154354)
location: region:1153619-1154354:-1
so has part: feature:1153619-1154354:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1153619-1154354:-1:exon

LOC116500192
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116500192
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2B 5-like
translation: MPEPAKSAPAPKKGSKKAVTKTQKKGDKKRRRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK
SIO_010081: LOC116500192
subclass of: SO_0000673
so part of: LOC116500192
location: complement(1153943..1154323)
location: region:1153943-1154323:-1
so has part: feature:1153943-1154323:-1:exon

XP_032061001.1
type: Protein
SIO_000068: ncbiprotein

position:1153943:-1
position: 1153943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1154323:-1
position: 1154323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1153943-1154323:-1:exon

TRNAG-GCC
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAG-GCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1155306..1155376
location: region:1155306-1155376:1
so has part: feature:1155306-1155376:1:exon
subclass of: SO_0000663

116500196
type: Gene
SIO_000068: ncbigene

position:1155306:1
position: 1155306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1155376:1
position: 1155376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1155306-1155376:1:exon

TRNAG-GCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAG-GCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon GCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1155338..1155340,aa:Gly,seq:gcc)
SIO_010081: TRNAG-GCC
subclass of: SO_0000673
so part of: TRNAG-GCC
location: 1155306..1155376
location: region:1155306-1155376:1
so has part: feature:1155306-1155376:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1155306-1155376:1:exon

TRNAN-GUU
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAN-GUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1155603..1155676)
location: region:1155603-1155676:-1
so has part: feature:1155603-1155676:-1:exon
subclass of: SO_0000663

116500198
type: Gene
SIO_000068: ncbigene

position:1155603:-1
position: 1155603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1155676:-1
position: 1155676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1155603-1155676:-1:exon

TRNAN-GUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAN-GUU
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1155640..1155642),aa:Asn, seq:gtt)
SIO_010081: TRNAN-GUU
subclass of: SO_0000673
so part of: TRNAN-GUU
location: complement(1155603..1155676)
location: region:1155603-1155676:-1
so has part: feature:1155603-1155676:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1155603-1155676:-1:exon

TRNAS-GCU
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAS-GCU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1156204..1156285)
location: region:1156204-1156285:-1
so has part: feature:1156204-1156285:-1:exon
subclass of: SO_0000663

116500199
type: Gene
SIO_000068: ncbigene

position:1156204:-1
position: 1156204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156285:-1
position: 1156285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1156204-1156285:-1:exon

TRNAS-GCU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAS-GCU
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA serine (anticodon GCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1156250..1156252),aa:Ser, seq:gct)
SIO_010081: TRNAS-GCU
subclass of: SO_0000673
so part of: TRNAS-GCU
location: complement(1156204..1156285)
location: region:1156204-1156285:-1
so has part: feature:1156204-1156285:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1156204-1156285:-1:exon

TRNAA-CGC
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAA-CGC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1156395..1156466
location: region:1156395-1156466:1
so has part: feature:1156395-1156466:1:exon
subclass of: SO_0000663

116500202
type: Gene
SIO_000068: ncbigene

position:1156395:1
position: 1156395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1156466:1
position: 1156466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1156395-1156466:1:exon

TRNAA-CGC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAA-CGC
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon CGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1156427..1156429,aa:Ala,seq:cgc)
SIO_010081: TRNAA-CGC
subclass of: SO_0000673
so part of: TRNAA-CGC
location: 1156395..1156466
location: region:1156395-1156466:1
so has part: feature:1156395-1156466:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1156395-1156466:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1156848..1156919
location: region:1156848-1156919:1
so has part: feature:1156848-1156919:1:exon
subclass of: SO_0000663

116500203
type: Gene
SIO_000068: ncbigene

position:1156848:1
position: 1156848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1156919:1
position: 1156919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1156848-1156919:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1156880..1156882,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 1156848..1156919
location: region:1156848-1156919:1
so has part: feature:1156848-1156919:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1156848-1156919:1:exon

TRNAD-GUC
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAD-GUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1159679..1159750)
location: region:1159679-1159750:-1
so has part: feature:1159679-1159750:-1:exon
subclass of: SO_0000663

116500200
type: Gene
SIO_000068: ncbigene

position:1159679:-1
position: 1159679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1159750:-1
position: 1159750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1159679-1159750:-1:exon

TRNAD-GUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAD-GUC
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1159715..1159717),aa:Asp, seq:gtc)
SIO_010081: TRNAD-GUC
subclass of: SO_0000673
so part of: TRNAD-GUC
location: complement(1159679..1159750)
location: region:1159679-1159750:-1
so has part: feature:1159679-1159750:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1159679-1159750:-1:exon

TRNAT-AGU
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAT-AGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1159952..1160025
location: region:1159952-1160025:1
so has part: feature:1159952-1160025:1:exon
subclass of: SO_0000663

116500204
type: Gene
SIO_000068: ncbigene

position:1159952:1
position: 1159952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1160025:1
position: 1160025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1159952-1160025:1:exon

TRNAT-AGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAT-AGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon AGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1159986..1159988,aa:Thr,seq:agt)
SIO_010081: TRNAT-AGU
subclass of: SO_0000673
so part of: TRNAT-AGU
location: 1159952..1160025
location: region:1159952-1160025:1
so has part: feature:1159952-1160025:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1159952-1160025:1:exon

TRNAE-CUC
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAE-CUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1160305..1160376)
location: region:1160305-1160376:-1
so has part: feature:1160305-1160376:-1:exon
subclass of: SO_0000663

116500201
type: Gene
SIO_000068: ncbigene

position:1160305:-1
position: 1160305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1160376:-1
position: 1160376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1160305-1160376:-1:exon

TRNAE-CUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAE-CUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1160341..1160343),aa:Glu, seq:ctc)
SIO_010081: TRNAE-CUC
subclass of: SO_0000673
so part of: TRNAE-CUC
location: complement(1160305..1160376)
location: region:1160305-1160376:-1
so has part: feature:1160305-1160376:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1160305-1160376:-1:exon

JOSD2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: JOSD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1161219..1164577)
location: region:1161219-1164577:-1
so has part: feature:1161219-1164577:-1:exon
subclass of: SO_0000010

116500158
type: Gene
SIO_000068: ncbigene

position:1161219:-1
position: 1161219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164577:-1
position: 1164577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1161219-1164577:-1:exon

JOSD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: JOSD2
product: Josephin domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205077.1
SIO_010081: JOSD2
subclass of: SO_0000673
so part of: JOSD2
location: complement(join(1161219..1162100,1162178..1162372,1164169..1164294,1164373..1164577))
location: region:1161219-1164577:-1
so has part: feature:1164373-1164577:-1:exon
so has part: feature:1164169-1164294:-1:exon
so has part: feature:1162178-1162372:-1:exon
so has part: feature:1161219-1162100:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1164373-1164577:-1:exon

position:1164373:-1
position: 1164373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1164169-1164294:-1:exon

position:1164169:-1
position: 1164169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164294:-1
position: 1164294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1162178-1162372:-1:exon

position:1162178:-1
position: 1162178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162372:-1
position: 1162372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1161219-1162100:-1:exon

position:1162100:-1
position: 1162100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

JOSD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: JOSD2
product: Josephin domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032205076.1
SIO_010081: JOSD2
subclass of: SO_0000673
so part of: JOSD2
location: complement(join(1161219..1162372,1164169..1164294,1164373..1164577))
location: region:1161219-1164577:-1
so has part: feature:1164373-1164577:-1:exon
so has part: feature:1164169-1164294:-1:exon
so has part: feature:1161219-1162372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1164373-1164577:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1164169-1164294:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1161219-1162372:-1:exon

JOSD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: JOSD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: josephin-2 isoform X1
translation: MSGPPPAGGAEPGLYHERQRLELCAVHALNNVLQRPCFTQEAADDICKRLAPDARLNPHRSVLGTGNYDVNVIMAALQSLGLAAVWWDKRRSLERLVLGQIVGFILNVPSHVSLGFVALPLRRKHWLAVRQLGGTYYNLDSKLRAPARIGGEAELRYDRGRRGDTEGDTRCHLHLPPLPPAELFSGISSPKGSARFSLSSPGPWRRPAPGSAPSDSSWGQGRRVAPAPVASG
SIO_010081: JOSD2
subclass of: SO_0000673
so part of: JOSD2
location: complement(join(1161946..1162372,1164169..1164294,1164373..1164518))
location: region:1161946-1164518:-1
so has part: feature:1164373-1164518:-1:exon
so has part: feature:1164169-1164294:-1:exon
so has part: feature:1161946-1162372:-1:exon

XP_032060967.1
type: Protein
SIO_000068: ncbiprotein

position:1161946:-1
position: 1161946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164518:-1
position: 1164518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1164373-1164518:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1164169-1164294:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1161946-1162372:-1:exon

JOSD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: JOSD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: josephin-2 isoform X2
translation: MSGPPPAGGAEPGLYHERQRLELCAVHALNNVLQRPCFTQEAADDICKRLAPDARLNPHRSVLGTGNYDVNVIMAALQSLGLAAVWWDKRRSLERLVLGQIVGFILNVPSHVSLGFVALPLRRKHWLAVRQLGGTYYNLDSKLRAPARIGGEAELRAFLRDFLAQGLCEVFLVVPRAVEEAGAWLSPE
SIO_010081: JOSD2
subclass of: SO_0000673
so part of: JOSD2
location: complement(join(1162001..1162100,1162178..1162372,1164169..1164294,1164373..1164518))
location: region:1162001-1164518:-1
so has part: feature:1164373-1164518:-1:exon
so has part: feature:1164169-1164294:-1:exon
so has part: feature:1162178-1162372:-1:exon
so has part: feature:1162001-1162100:-1:exon

XP_032060968.1
type: Protein
SIO_000068: ncbiprotein

position:1162001:-1
position: 1162001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1164373-1164518:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1164169-1164294:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1162178-1162372:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1162001-1162100:-1:exon