Aythya fuligula isolate bAytFul2 chromosome 24, bAytFul2.pri, whole genome shotgun sequence.
type: Entry
definition: Aythya fuligula isolate bAytFul2 chromosome 24, bAytFul2.pri, whole genome shotgun sequence.
sequence version: NC_045582.1
sequence date: 2020-01-30
sequence: sequence
division: CON
label: NC_045582.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA602521
dblink: SAMN12621346
keyword: WGS
keyword: RefSeq
source: Aythya fuligula (tufted duck)
organism: Aythya fuligula
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Aythyinae; Aythya.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020323.1.\nAssembly name: bAytFul2.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/12/31. The original whole-genome shotgun project has the\naccession WNMM00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 20-SEP-2019\nAssembly Method :: FALCON v. 2018.31.08-03.06; FALCON-Unzip\n v. 6.0.0.47841; purge_haplotigs v.\n v1.0.3+ 1.Nov.2018; scaff10x v. 4.1.0;\n Bionano Solve DLS v. 3.2.1; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishing\n & gap filling v. 6.0.0.47841; longranger\n align v. 2.2.2; freebayes Illumina\n polishing v. 1.3; gEVAL manual curation\n v. 2019-09-20; VGP assembly pipeline\n individual v. 1.5\nAssembly Name :: bAytFul2.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 64.03x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Aythya fuligula Annotation Release\n 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 6710917
topology: linear
so has quality: SO_0000987
location: 1..6710917
location: region:1-6710917:1
RO_0002162: 219594

NC_045582
type: RefSeq
SIO_000068: refseq

PRJNA602521
type: BioProject
SIO_000068: bioproject

SAMN12621346
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6710917:1
position: 6710917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-6710917:1:source
so part of: sequence
organism: Aythya fuligula
mol type: genomic DNA
isolate: bAytFul2
chromosome: 24
sex: female
tissue type: lung (powdered)
dev stage: adult
country: Sweden
lat lon: 59.8509 N 17.6300 E
collection date: 28-Aug-2017
collected by: Patrik Ellstrom, Mahmoud Naguib, Josef Jarhult

219594
type: Taxonomy
SIO_000068: taxonomy

ZNF652
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: ZNF652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11458..21350
location: region:11458-21350:1
so has part: feature:11458-21350:1:exon
subclass of: SO_0000010

116498454
type: Gene
SIO_000068: ncbigene

position:11458:1
position: 11458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21350:1
position: 21350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11458-21350:1:exon

ZNF652
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ZNF652
product: zinc finger protein 652
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202735.1
SIO_010081: ZNF652
subclass of: SO_0000673
so part of: ZNF652
location: join(11458..12605,15997..16144,16454..16569,19372..19516,19920..21350)
location: region:11458-21350:1
so has part: feature:11458-12605:1:exon
so has part: feature:15997-16144:1:exon
so has part: feature:16454-16569:1:exon
so has part: feature:19372-19516:1:exon
so has part: feature:19920-21350:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11458-12605:1:exon

position:12605:1
position: 12605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15997-16144:1:exon

position:15997:1
position: 15997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16144:1
position: 16144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16454-16569:1:exon

position:16454:1
position: 16454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16569:1
position: 16569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:19372-19516:1:exon

position:19372:1
position: 19372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19516:1
position: 19516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:19920-21350:1:exon

position:19920:1
position: 19920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF652
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: ZNF652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 652
translation: MSQTTNSCQQLVENCAVHVAGMAQEDSHRGQVPPTFYHGASQELDLSTKVYKRESGSPYSVLVDSKMSKPHLHEREEQPYFRENRSVGEVRAVKEDRENSDDSEEEEEEEDEVTYKREQIIVEVNLNNQTLNVSKGEKGVPSQSKETAVLKTSSEEEEGDSGEEATEESNDEEENERQKKKEKRVEKVSVAQRRTRRAASAAAATTSPSPRTTRGRRKSVEPPKRKKKAAKEPKAPVQKSKCEEKETLTCEKCPRVFNTRWYLEKHMNVTHRRMQICDKCGKKFVLESELSLHQQTDCEKNIQCVSCNKSFKKLWSLHEHIKIVHGYAEKKFSCEICEKKFYTMAHVRKHMVAHTKDMPFTCETCGKSFKRSMSLKVHSLQHSGEKPFRCENCDERFQYKYQLRSHMSIHIGHKQFMCQWCGKDFNMKQYFDEHMKTHTGEKPFICEICGKSFTSRPNMKRHRRTHTGEKPYPCDVCGQRFRFSNMLKAHKEKCFRVTSPVNVSSAVQIPLSTAASATTVPAVVNTPTTPTPPMNLNPVNTLPPRPIPHPYSHLHLHPHPHHPHHLPVPPVPHLPPPPALFKSEPLNHRGQSEDNFLRHLAEKNSSAQHH
SIO_010081: ZNF652
subclass of: SO_0000673
so part of: ZNF652
location: join(11697..12605,15997..16144,16454..16569,19372..19516,19920..20434)
location: region:11697-20434:1
so has part: feature:11697-12605:1:exon
so has part: feature:15997-16144:1:exon
so has part: feature:16454-16569:1:exon
so has part: feature:19372-19516:1:exon
so has part: feature:19920-20434:1:exon

XP_032058626.1
type: Protein
SIO_000068: ncbiprotein

position:11697:1
position: 11697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20434:1
position: 20434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11697-12605:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15997-16144:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16454-16569:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19372-19516:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:19920-20434:1:exon

PHOSPHO1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 34132..41672
location: region:34132-41672:1
so has part: feature:34132-41672:1:exon
subclass of: SO_0000010

116498506
type: Gene
SIO_000068: ncbigene

position:34132:1
position: 34132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41672:1
position: 41672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34132-41672:1:exon

PHOSPHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: PHOSPHO1
product: phosphoethanolamine/phosphocholine phosphatase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032202814.1
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(34132..34337,36216..36317,39052..39338,40194..41672)
location: region:34132-41672:1
so has part: feature:34132-34337:1:exon
so has part: feature:36216-36317:1:exon
so has part: feature:39052-39338:1:exon
so has part: feature:40194-41672:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34132-34337:1:exon

position:34337:1
position: 34337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:36216-36317:1:exon

position:36216:1
position: 36216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36317:1
position: 36317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:39052-39338:1:exon

position:39052:1
position: 39052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39338:1
position: 39338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:40194-41672:1:exon

position:40194:1
position: 40194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PHOSPHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: PHOSPHO1
product: phosphoethanolamine/phosphocholine phosphatase 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202815.1
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(34132..34337,39222..39338,40194..41672)
location: region:34132-41672:1
so has part: feature:34132-34337:1:exon
so has part: feature:39222-39338:1:exon
so has part: feature:40194-41672:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34132-34337:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:39222-39338:1:exon

position:39222:1
position: 39222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:40194-41672:1:exon

PHOSPHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: PHOSPHO1
product: phosphoethanolamine/phosphocholine phosphatase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032202811.1
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(35006..36317,39052..39338,40194..41672)
location: region:35006-41672:1
so has part: feature:35006-36317:1:exon
so has part: feature:39052-39338:1:exon
so has part: feature:40194-41672:1:exon

position:35006:1
position: 35006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35006-36317:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:39052-39338:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:40194-41672:1:exon

PHOSPHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: PHOSPHO1
product: phosphoethanolamine/phosphocholine phosphatase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202812.1
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(35006..36317,39222..39338,40194..41672)
location: region:35006-41672:1
so has part: feature:35006-36317:1:exon
so has part: feature:39222-39338:1:exon
so has part: feature:40194-41672:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35006-36317:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:39222-39338:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:40194-41672:1:exon

PHOSPHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: PHOSPHO1
product: phosphoethanolamine/phosphocholine phosphatase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202813.1
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(37978..39338,40194..41672)
location: region:37978-41672:1
so has part: feature:37978-39338:1:exon
so has part: feature:40194-41672:1:exon

position:37978:1
position: 37978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37978-39338:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:40194-41672:1:exon

PHOSPHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoethanolamine/phosphocholine phosphatase
translation: MKRCCEGVGLPCLFKGVGMASSQPPKYLLIFDFDETIINENSDDSIIRAAPGQALPEHIRQTFCEGFYNEYMQRVLTYMGDQGVKMGDFKTVYENIPLSPGMPDLLQFLSKNHEVFEIILISDANMFGIECNLRAAGFYSLFRKIFSNPSSFDKRGYFTLGPYHSHKCLDCPANMCKRKILTEYLAERAQEEVEFERVFYVGDGANDFCPSVTLTSADIAFPRKGYPMHRMTQEMENKQPGAFQATVVPWESATEVTRYLQDVLKKC
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(39294..39338,40194..40952)
location: region:39294-40952:1
so has part: feature:39294-39338:1:exon
so has part: feature:40194-40952:1:exon

XP_032058702.1
type: Protein
SIO_000068: ncbiprotein

position:39294:1
position: 39294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40952:1
position: 40952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39294-39338:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:40194-40952:1:exon

PHOSPHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoethanolamine/phosphocholine phosphatase
translation: MKRCCEGVGLPCLFKGVGMASSQPPKYLLIFDFDETIINENSDDSIIRAAPGQALPEHIRQTFCEGFYNEYMQRVLTYMGDQGVKMGDFKTVYENIPLSPGMPDLLQFLSKNHEVFEIILISDANMFGIECNLRAAGFYSLFRKIFSNPSSFDKRGYFTLGPYHSHKCLDCPANMCKRKILTEYLAERAQEEVEFERVFYVGDGANDFCPSVTLTSADIAFPRKGYPMHRMTQEMENKQPGAFQATVVPWESATEVTRYLQDVLKKC
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(39294..39338,40194..40952)
location: region:39294-40952:1
so has part: feature:39294-39338:1:exon
so has part: feature:40194-40952:1:exon

XP_032058703.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39294-39338:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:40194-40952:1:exon

PHOSPHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoethanolamine/phosphocholine phosphatase
translation: MKRCCEGVGLPCLFKGVGMASSQPPKYLLIFDFDETIINENSDDSIIRAAPGQALPEHIRQTFCEGFYNEYMQRVLTYMGDQGVKMGDFKTVYENIPLSPGMPDLLQFLSKNHEVFEIILISDANMFGIECNLRAAGFYSLFRKIFSNPSSFDKRGYFTLGPYHSHKCLDCPANMCKRKILTEYLAERAQEEVEFERVFYVGDGANDFCPSVTLTSADIAFPRKGYPMHRMTQEMENKQPGAFQATVVPWESATEVTRYLQDVLKKC
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(39294..39338,40194..40952)
location: region:39294-40952:1
so has part: feature:39294-39338:1:exon
so has part: feature:40194-40952:1:exon

XP_032058704.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39294-39338:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:40194-40952:1:exon

PHOSPHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoethanolamine/phosphocholine phosphatase
translation: MKRCCEGVGLPCLFKGVGMASSQPPKYLLIFDFDETIINENSDDSIIRAAPGQALPEHIRQTFCEGFYNEYMQRVLTYMGDQGVKMGDFKTVYENIPLSPGMPDLLQFLSKNHEVFEIILISDANMFGIECNLRAAGFYSLFRKIFSNPSSFDKRGYFTLGPYHSHKCLDCPANMCKRKILTEYLAERAQEEVEFERVFYVGDGANDFCPSVTLTSADIAFPRKGYPMHRMTQEMENKQPGAFQATVVPWESATEVTRYLQDVLKKC
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(39294..39338,40194..40952)
location: region:39294-40952:1
so has part: feature:39294-39338:1:exon
so has part: feature:40194-40952:1:exon

XP_032058705.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39294-39338:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:40194-40952:1:exon

PHOSPHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoethanolamine/phosphocholine phosphatase
translation: MKRCCEGVGLPCLFKGVGMASSQPPKYLLIFDFDETIINENSDDSIIRAAPGQALPEHIRQTFCEGFYNEYMQRVLTYMGDQGVKMGDFKTVYENIPLSPGMPDLLQFLSKNHEVFEIILISDANMFGIECNLRAAGFYSLFRKIFSNPSSFDKRGYFTLGPYHSHKCLDCPANMCKRKILTEYLAERAQEEVEFERVFYVGDGANDFCPSVTLTSADIAFPRKGYPMHRMTQEMENKQPGAFQATVVPWESATEVTRYLQDVLKKC
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(39294..39338,40194..40952)
location: region:39294-40952:1
so has part: feature:39294-39338:1:exon
so has part: feature:40194-40952:1:exon

XP_032058706.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39294-39338:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:40194-40952:1:exon

ABI3
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: ABI3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(43544..48224)
location: region:43544-48224:-1
so has part: feature:43544-48224:-1:exon
subclass of: SO_0000010

116498441
type: Gene
SIO_000068: ncbigene

position:43544:-1
position: 43544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48224:-1
position: 48224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43544-48224:-1:exon

ABI3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ABI3
product: ABI family member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 11% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032202716.1
SIO_010081: ABI3
subclass of: SO_0000673
so part of: ABI3
location: complement(join(43544..43704,43920..44045,44170..44229,44776..44900,45161..45243,45950..46126,47024..47182,48108..48224))
location: region:43544-48224:-1
so has part: feature:48108-48224:-1:exon
so has part: feature:47024-47182:-1:exon
so has part: feature:45950-46126:-1:exon
so has part: feature:45161-45243:-1:exon
so has part: feature:44776-44900:-1:exon
so has part: feature:44170-44229:-1:exon
so has part: feature:43920-44045:-1:exon
so has part: feature:43544-43704:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:48108-48224:-1:exon

position:48108:-1
position: 48108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:47024-47182:-1:exon

position:47024:-1
position: 47024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47182:-1
position: 47182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:45950-46126:-1:exon

position:45950:-1
position: 45950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46126:-1
position: 46126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:45161-45243:-1:exon

position:45161:-1
position: 45161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45243:-1
position: 45243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:44776-44900:-1:exon

position:44776:-1
position: 44776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44900:-1
position: 44900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:44170-44229:-1:exon

position:44170:-1
position: 44170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44229:-1
position: 44229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:43920-44045:-1:exon

position:43920:-1
position: 43920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44045:-1
position: 44045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:43544-43704:-1:exon

position:43704:-1
position: 43704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ABI3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: ABI3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ABI gene family member 3
translation: MSELQQLQQCDIPAARQVLRDNHCNLHRVADYCESNYVQASDKQKALEETMAFSTQSLASVAYQVSSLATTLLQLLDLQVAELRKVEANISCRIDMHKEKVSRREIGSLTISKRFPAHQKIMSPPSPPCLEPYYRKPLNFSILDDIGHGIKDHSTQLSRTGTLSRKGIKSTTQSAGTLGRSTRVPEPIQPPVVPLGKLSTASSTSSLTSVRYRHGSERPRDLPPPPLGDLALPPLDIIPPVSDDLEPLLLPPPALPDLEDFTPPLPPDVEEPPWVPASYLEKVVTLYPYAQQKDNELSFQPGALIYVTRRYSDGWCEGVMGEEVGFFPGNYVEPF
SIO_010081: ABI3
subclass of: SO_0000673
so part of: ABI3
location: complement(join(43544..43704,43920..44045,44170..44229,44776..44900,45161..45243,45950..46126,47024..47182,48108..48224))
location: region:43544-48224:-1
so has part: feature:48108-48224:-1:exon
so has part: feature:47024-47182:-1:exon
so has part: feature:45950-46126:-1:exon
so has part: feature:45161-45243:-1:exon
so has part: feature:44776-44900:-1:exon
so has part: feature:44170-44229:-1:exon
so has part: feature:43920-44045:-1:exon
so has part: feature:43544-43704:-1:exon

XP_032058607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48108-48224:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:47024-47182:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45950-46126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45161-45243:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44776-44900:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44170-44229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43920-44045:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43544-43704:-1:exon

GNGT2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: GNGT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 49202..50478
location: region:49202-50478:1
so has part: feature:49202-50478:1:exon
subclass of: SO_0000010

116498556
type: Gene
SIO_000068: ncbigene

position:49202:1
position: 49202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50478:1
position: 50478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49202-50478:1:exon

GNGT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: GNGT2
product: G protein subunit gamma transducin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032202880.1
SIO_010081: GNGT2
subclass of: SO_0000673
so part of: GNGT2
location: join(49202..49256,49867..49956,50320..50478)
location: region:49202-50478:1
so has part: feature:49202-49256:1:exon
so has part: feature:49867-49956:1:exon
so has part: feature:50320-50478:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49202-49256:1:exon

position:49256:1
position: 49256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:49867-49956:1:exon

position:49867:1
position: 49867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49956:1
position: 49956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:50320-50478:1:exon

position:50320:1
position: 50320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GNGT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: GNGT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-T2
translation: MAQDMTEKELFEDGTGSAEKEVKNDRQMVSKTGKEIKEYVESMAGEDPLLKGVPEDKNPFKEKGGCTIS
SIO_010081: GNGT2
subclass of: SO_0000673
so part of: GNGT2
location: join(49873..49956,50320..50445)
location: region:49873-50445:1
so has part: feature:49873-49956:1:exon
so has part: feature:50320-50445:1:exon

XP_032058771.1
type: Protein
SIO_000068: ncbiprotein

position:49873:1
position: 49873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50445:1
position: 50445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49873-49956:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:50320-50445:1:exon

TRNAQ-UUG
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAQ-UUG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(52668..52739)
location: region:52668-52739:-1
so has part: feature:52668-52739:-1:exon
subclass of: SO_0000663

116498648
type: Gene
SIO_000068: ncbigene

position:52668:-1
position: 52668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52739:-1
position: 52739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52668-52739:-1:exon

TRNAQ-UUG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAQ-UUG
product: tRNA-Gln
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamine (anticodon UUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(52704..52706),aa:Gln,seq:ttg)
SIO_010081: TRNAQ-UUG
subclass of: SO_0000673
so part of: TRNAQ-UUG
location: complement(52668..52739)
location: region:52668-52739:-1
so has part: feature:52668-52739:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52668-52739:-1:exon

IGF2BP1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: IGF2BP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(62321..91430)
location: region:62321-91430:-1
so has part: feature:62321-91430:-1:exon
subclass of: SO_0000010

116498504
type: Gene
SIO_000068: ncbigene

position:62321:-1
position: 62321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91430:-1
position: 91430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62321-91430:-1:exon

IGF2BP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: IGF2BP1
product: insulin like growth factor 2 mRNA binding protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 61% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032202809.1
SIO_010081: IGF2BP1
subclass of: SO_0000673
so part of: IGF2BP1
location: complement(join(62321..62413,62922..63035,63220..63351,63701..63775,63974..64096,64401..64520,64651..64786,65292..65414,68634..68697,69931..69982,70496..70544,90153..90213,91256..91430))
location: region:62321-91430:-1
so has part: feature:91256-91430:-1:exon
so has part: feature:90153-90213:-1:exon
so has part: feature:70496-70544:-1:exon
so has part: feature:69931-69982:-1:exon
so has part: feature:68634-68697:-1:exon
so has part: feature:65292-65414:-1:exon
so has part: feature:64651-64786:-1:exon
so has part: feature:64401-64520:-1:exon
so has part: feature:63974-64096:-1:exon
so has part: feature:63701-63775:-1:exon
so has part: feature:63220-63351:-1:exon
so has part: feature:62922-63035:-1:exon
so has part: feature:62321-62413:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:91256-91430:-1:exon

position:91256:-1
position: 91256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:90153-90213:-1:exon

position:90153:-1
position: 90153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90213:-1
position: 90213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:70496-70544:-1:exon

position:70496:-1
position: 70496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70544:-1
position: 70544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:69931-69982:-1:exon

position:69931:-1
position: 69931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69982:-1
position: 69982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:68634-68697:-1:exon

position:68634:-1
position: 68634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68697:-1
position: 68697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:65292-65414:-1:exon

position:65292:-1
position: 65292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65414:-1
position: 65414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:64651-64786:-1:exon

position:64651:-1
position: 64651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64786:-1
position: 64786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:64401-64520:-1:exon

position:64401:-1
position: 64401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64520:-1
position: 64520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:63974-64096:-1:exon

position:63974:-1
position: 63974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64096:-1
position: 64096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:63701-63775:-1:exon

position:63701:-1
position: 63701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63775:-1
position: 63775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:63220-63351:-1:exon

position:63220:-1
position: 63220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63351:-1
position: 63351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:62922-63035:-1:exon

position:62922:-1
position: 62922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63035:-1
position: 63035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:62321-62413:-1:exon

position:62413:-1
position: 62413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IGF2BP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: IGF2BP1
product: insulin like growth factor 2 mRNA binding protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 57% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032202806.1
SIO_010081: IGF2BP1
subclass of: SO_0000673
so part of: IGF2BP1
location: complement(join(62321..62413,62922..63035,63220..63351,63701..63775,63974..64096,64401..64520,64651..64786,65292..65414,65688..65822,66551..66832,68634..68697,69931..69982,70496..70544,90153..90213,91256..91430))
location: region:62321-91430:-1
so has part: feature:91256-91430:-1:exon
so has part: feature:90153-90213:-1:exon
so has part: feature:70496-70544:-1:exon
so has part: feature:69931-69982:-1:exon
so has part: feature:68634-68697:-1:exon
so has part: feature:66551-66832:-1:exon
so has part: feature:65688-65822:-1:exon
so has part: feature:65292-65414:-1:exon
so has part: feature:64651-64786:-1:exon
so has part: feature:64401-64520:-1:exon
so has part: feature:63974-64096:-1:exon
so has part: feature:63701-63775:-1:exon
so has part: feature:63220-63351:-1:exon
so has part: feature:62922-63035:-1:exon
so has part: feature:62321-62413:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:91256-91430:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90153-90213:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:70496-70544:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69931-69982:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:68634-68697:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:66551-66832:-1:exon

position:66551:-1
position: 66551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66832:-1
position: 66832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:65688-65822:-1:exon

position:65688:-1
position: 65688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65822:-1
position: 65822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:65292-65414:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:64651-64786:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:64401-64520:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:63974-64096:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:63701-63775:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:63220-63351:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:62922-63035:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:62321-62413:-1:exon

IGF2BP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: IGF2BP1
product: insulin like growth factor 2 mRNA binding protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 57% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032202808.1
SIO_010081: IGF2BP1
subclass of: SO_0000673
so part of: IGF2BP1
location: complement(join(62321..62413,62922..63035,63220..63351,63701..63775,63974..64090,64398..64520,64651..64786,65292..65414,65688..65822,66551..66832,68634..68697,69931..69982,70496..70544,90153..90213,91256..91430))
location: region:62321-91430:-1
so has part: feature:91256-91430:-1:exon
so has part: feature:90153-90213:-1:exon
so has part: feature:70496-70544:-1:exon
so has part: feature:69931-69982:-1:exon
so has part: feature:68634-68697:-1:exon
so has part: feature:66551-66832:-1:exon
so has part: feature:65688-65822:-1:exon
so has part: feature:65292-65414:-1:exon
so has part: feature:64651-64786:-1:exon
so has part: feature:64398-64520:-1:exon
so has part: feature:63974-64090:-1:exon
so has part: feature:63701-63775:-1:exon
so has part: feature:63220-63351:-1:exon
so has part: feature:62922-63035:-1:exon
so has part: feature:62321-62413:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:91256-91430:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90153-90213:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:70496-70544:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69931-69982:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:68634-68697:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:66551-66832:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:65688-65822:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:65292-65414:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:64651-64786:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:64398-64520:-1:exon

position:64398:-1
position: 64398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:63974-64090:-1:exon

position:64090:-1
position: 64090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:63701-63775:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:63220-63351:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:62922-63035:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:62321-62413:-1:exon

IGF2BP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: IGF2BP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin-like growth factor 2 mRNA-binding protein 1 isoform X3
translation: MNKLYIGNLNENVTPADLEKVFNDHKISFTGQFLVKSGYAFVDCPDEQWAMKAIETFSGKVELHGKQLEIEHSVPKKQRSRKIQIRNIPPQLRWEVLDGLLAQYGTVENCEQVNTDSETAVVNVTYANREQTRQADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGSIENCCKAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAAVGLFPASSNAVPPPPSSVSGAAPYSSFLQPPEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASSAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDENEQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSGQLQARRK
SIO_010081: IGF2BP1
subclass of: SO_0000673
so part of: IGF2BP1
location: complement(join(62321..62413,62922..63035,63220..63351,63701..63775,63974..64096,64401..64520,64651..64786,65292..65414,68634..68697,69931..69982,70496..70544,90153..90213,91256..91430))
location: region:62321-91430:-1
so has part: feature:91256-91430:-1:exon
so has part: feature:90153-90213:-1:exon
so has part: feature:70496-70544:-1:exon
so has part: feature:69931-69982:-1:exon
so has part: feature:68634-68697:-1:exon
so has part: feature:65292-65414:-1:exon
so has part: feature:64651-64786:-1:exon
so has part: feature:64401-64520:-1:exon
so has part: feature:63974-64096:-1:exon
so has part: feature:63701-63775:-1:exon
so has part: feature:63220-63351:-1:exon
so has part: feature:62922-63035:-1:exon
so has part: feature:62321-62413:-1:exon

XP_032058700.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91256-91430:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90153-90213:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:70496-70544:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69931-69982:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:68634-68697:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:65292-65414:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:64651-64786:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:64401-64520:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:63974-64096:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:63701-63775:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:63220-63351:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:62922-63035:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:62321-62413:-1:exon

IGF2BP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: IGF2BP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin-like growth factor 2 mRNA-binding protein 1 isoform X1
translation: MNKLYIGNLNENVTPADLEKVFNDHKISFTGQFLVKSGYAFVDCPDEQWAMKAIETFSGKVELHGKQLEIEHSVPKKQRSRKIQIRNIPPQLRWEVLDGLLAQYGTVENCEQVNTDSETAVVNVTYANREQTRQAIMKLNGHQLENHALKVSYIPDEQSMQGPENGRRGGFGARGAPRQGSPVTAGAPVKQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTPEGCSAACKMILEIMQKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGSIENCCKAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAAVGLFPASSNAVPPPPSSVSGAAPYSSFLQPPEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASSAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDENEQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSGQLQARRK
SIO_010081: IGF2BP1
subclass of: SO_0000673
so part of: IGF2BP1
location: complement(join(62321..62413,62922..63035,63220..63351,63701..63775,63974..64096,64401..64520,64651..64786,65292..65414,65688..65822,66551..66832,68634..68697,69931..69982,70496..70544,90153..90213,91256..91430))
location: region:62321-91430:-1
so has part: feature:91256-91430:-1:exon
so has part: feature:90153-90213:-1:exon
so has part: feature:70496-70544:-1:exon
so has part: feature:69931-69982:-1:exon
so has part: feature:68634-68697:-1:exon
so has part: feature:66551-66832:-1:exon
so has part: feature:65688-65822:-1:exon
so has part: feature:65292-65414:-1:exon
so has part: feature:64651-64786:-1:exon
so has part: feature:64401-64520:-1:exon
so has part: feature:63974-64096:-1:exon
so has part: feature:63701-63775:-1:exon
so has part: feature:63220-63351:-1:exon
so has part: feature:62922-63035:-1:exon
so has part: feature:62321-62413:-1:exon

XP_032058697.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91256-91430:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90153-90213:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:70496-70544:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69931-69982:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:68634-68697:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:66551-66832:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:65688-65822:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:65292-65414:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:64651-64786:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:64401-64520:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:63974-64096:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:63701-63775:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:63220-63351:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:62922-63035:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:62321-62413:-1:exon

IGF2BP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: IGF2BP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin-like growth factor 2 mRNA-binding protein 1 isoform X2
translation: MNKLYIGNLNENVTPADLEKVFNDHKISFTGQFLVKSGYAFVDCPDEQWAMKAIETFSGKVELHGKQLEIEHSVPKKQRSRKIQIRNIPPQLRWEVLDGLLAQYGTVENCEQVNTDSETAVVNVTYANREQTRQAIMKLNGHQLENHALKVSYIPDEQSMQGPENGRRGGFGARGAPRQGSPVTAGAPVKQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTPEGCSAACKMILEIMQKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGSIENCCKAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAAVGLFPASSNAVPPPPSSVSGAAPYSSFMPPEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASSAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDENEQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSGQLQARRK
SIO_010081: IGF2BP1
subclass of: SO_0000673
so part of: IGF2BP1
location: complement(join(62321..62413,62922..63035,63220..63351,63701..63775,63974..64090,64398..64520,64651..64786,65292..65414,65688..65822,66551..66832,68634..68697,69931..69982,70496..70544,90153..90213,91256..91430))
location: region:62321-91430:-1
so has part: feature:91256-91430:-1:exon
so has part: feature:90153-90213:-1:exon
so has part: feature:70496-70544:-1:exon
so has part: feature:69931-69982:-1:exon
so has part: feature:68634-68697:-1:exon
so has part: feature:66551-66832:-1:exon
so has part: feature:65688-65822:-1:exon
so has part: feature:65292-65414:-1:exon
so has part: feature:64651-64786:-1:exon
so has part: feature:64398-64520:-1:exon
so has part: feature:63974-64090:-1:exon
so has part: feature:63701-63775:-1:exon
so has part: feature:63220-63351:-1:exon
so has part: feature:62922-63035:-1:exon
so has part: feature:62321-62413:-1:exon

XP_032058699.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91256-91430:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90153-90213:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:70496-70544:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69931-69982:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:68634-68697:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:66551-66832:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:65688-65822:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:65292-65414:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:64651-64786:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:64398-64520:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:63974-64090:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:63701-63775:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:63220-63351:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:62922-63035:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:62321-62413:-1:exon

GIP
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: GIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 104402..109096
location: region:104402-109096:1
so has part: feature:104402-109096:1:exon
subclass of: SO_0000010

116498250
type: Gene
SIO_000068: ncbigene

position:104402:1
position: 104402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109096:1
position: 109096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104402-109096:1:exon

GIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: GIP
product: gastric inhibitory polypeptide
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_032202497.1
SIO_010081: GIP
subclass of: SO_0000673
so part of: GIP
location: join(104402..104472,105518..105664,105995..106126,109000..109096)
location: region:104402-109096:1
so has part: feature:104402-104472:1:exon
so has part: feature:105518-105664:1:exon
so has part: feature:105995-106126:1:exon
so has part: feature:109000-109096:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:104402-104472:1:exon

position:104472:1
position: 104472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:105518-105664:1:exon

position:105518:1
position: 105518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105664:1
position: 105664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:105995-106126:1:exon

position:105995:1
position: 105995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106126:1
position: 106126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:109000-109096:1:exon

position:109000:1
position: 109000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GIP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: GIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastric inhibitory polypeptide
translation: MSLKVLSLLFASLSFVLMEENVSGISIRTPSARPVQKRYSEATLASDYSRTMDNMLKKNFVEWLLARREKKSDNVIETYKREAEPQVSAVNGQSLDLHNHEAKDFFAWLLKNKKNQSFTSLEGSEDLKDVLNQEFLTWLMSIDLCRPT
SIO_010081: GIP
subclass of: SO_0000673
so part of: GIP
location: join(104402..104472,105518..105664,105995..106126,109000..109096)
location: region:104402-109096:1
so has part: feature:104402-104472:1:exon
so has part: feature:105518-105664:1:exon
so has part: feature:105995-106126:1:exon
so has part: feature:109000-109096:1:exon

XP_032058388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104402-104472:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105518-105664:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:105995-106126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:109000-109096:1:exon

SNF8
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: SNF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 110648..121039
location: region:110648-121039:1
so has part: feature:110648-121039:1:exon
subclass of: SO_0000010

116498396
type: Gene
SIO_000068: ncbigene

position:110648:1
position: 110648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121039:1
position: 121039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110648-121039:1:exon

SNF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SNF8
product: SNF8 subunit of ESCRT-II
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202652.1
SIO_010081: SNF8
subclass of: SO_0000673
so part of: SNF8
location: join(110648..110714,110893..110943,111363..111501,111820..111924,119280..119352,119950..120091,120302..120376,120797..121039)
location: region:110648-121039:1
so has part: feature:110648-110714:1:exon
so has part: feature:110893-110943:1:exon
so has part: feature:111363-111501:1:exon
so has part: feature:111820-111924:1:exon
so has part: feature:119280-119352:1:exon
so has part: feature:119950-120091:1:exon
so has part: feature:120302-120376:1:exon
so has part: feature:120797-121039:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110648-110714:1:exon

position:110714:1
position: 110714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:110893-110943:1:exon

position:110893:1
position: 110893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110943:1
position: 110943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:111363-111501:1:exon

position:111363:1
position: 111363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111501:1
position: 111501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:111820-111924:1:exon

position:111820:1
position: 111820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111924:1
position: 111924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:119280-119352:1:exon

position:119280:1
position: 119280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119352:1
position: 119352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:119950-120091:1:exon

position:119950:1
position: 119950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120091:1
position: 120091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:120302-120376:1:exon

position:120302:1
position: 120302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120376:1
position: 120376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:120797-121039:1:exon

position:120797:1
position: 120797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SNF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar-sorting protein SNF8
translation: MHRRGVGAGAVAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKSPAFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIVEVCLALKHRNGGLITLEELHQQVLKGRGKFAQEVSQDDLLRAIKKLKVLGNGFGIIPVGGTYLVQSVPAELNMDHTVVLQLAEKKGYVTVSEIRSSLKWEVERAKQILEHLLKEGMAWLDTQAAGEPQYWLPALFTELYSQEITPEEAKEAIP
SIO_010081: SNF8
subclass of: SO_0000673
so part of: SNF8
location: join(110661..110714,110893..110943,111363..111501,111820..111924,119280..119352,119950..120091,120302..120376,120797..120934)
location: region:110661-120934:1
so has part: feature:110661-110714:1:exon
so has part: feature:110893-110943:1:exon
so has part: feature:111363-111501:1:exon
so has part: feature:111820-111924:1:exon
so has part: feature:119280-119352:1:exon
so has part: feature:119950-120091:1:exon
so has part: feature:120302-120376:1:exon
so has part: feature:120797-120934:1:exon

XP_032058543.1
type: Protein
SIO_000068: ncbiprotein

position:110661:1
position: 110661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120934:1
position: 120934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110661-110714:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:110893-110943:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111363-111501:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:111820-111924:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119280-119352:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:119950-120091:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:120302-120376:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:120797-120934:1:exon

UBE2Z
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: UBE2Z
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(121320..134127)
location: region:121320-134127:-1
so has part: feature:121320-134127:-1:exon
subclass of: SO_0000010

116498395
type: Gene
SIO_000068: ncbigene

position:121320:-1
position: 121320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134127:-1
position: 134127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121320-134127:-1:exon

UBE2Z
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: UBE2Z
product: ubiquitin conjugating enzyme E2 Z
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202651.1
SIO_010081: UBE2Z
subclass of: SO_0000673
so part of: UBE2Z
location: complement(join(121320..123843,126879..126969,127498..127610,128217..128328,130213..130400,132193..132265,133799..134127))
location: region:121320-134127:-1
so has part: feature:133799-134127:-1:exon
so has part: feature:132193-132265:-1:exon
so has part: feature:130213-130400:-1:exon
so has part: feature:128217-128328:-1:exon
so has part: feature:127498-127610:-1:exon
so has part: feature:126879-126969:-1:exon
so has part: feature:121320-123843:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133799-134127:-1:exon

position:133799:-1
position: 133799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:132193-132265:-1:exon

position:132193:-1
position: 132193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132265:-1
position: 132265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:130213-130400:-1:exon

position:130213:-1
position: 130213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130400:-1
position: 130400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:128217-128328:-1:exon

position:128217:-1
position: 128217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128328:-1
position: 128328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:127498-127610:-1:exon

position:127498:-1
position: 127498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127610:-1
position: 127610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:126879-126969:-1:exon

position:126879:-1
position: 126879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126969:-1
position: 126969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:121320-123843:-1:exon

position:123843:-1
position: 123843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBE2Z
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: UBE2Z
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 Z
translation: MAESPAAEEAAPAPAAVLAAGGGGGASAGPGGGAGSPGVFIPAELWAAAGFGAAPASAGVAPGSGGAPIAAAAAAAGAALLTHSAFWDPTVSGDWDSERPSPACLLRIKRDIMSIYKEPPPGMFVVPDPHDMTKIHALITGPFDTPYEGGFFLFLFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTGPAWSPAQSISSVLISIQSLMTENPYHNEPGFEQERHPGDSKNYNECIRHETIRVAVCDMLEGKCPCPEPLRGVMEKSFMEYYDFYEGVCKERLYLQGQTMQDPFGEKRGHFDYQSLLVRLQGIRQKVQEKHQQANTEIDSESSSSETETDAQSCSKA
SIO_010081: UBE2Z
subclass of: SO_0000673
so part of: UBE2Z
location: complement(join(123673..123843,126879..126969,127498..127610,128217..128328,130213..130400,132193..132265,133799..134127))
location: region:123673-134127:-1
so has part: feature:133799-134127:-1:exon
so has part: feature:132193-132265:-1:exon
so has part: feature:130213-130400:-1:exon
so has part: feature:128217-128328:-1:exon
so has part: feature:127498-127610:-1:exon
so has part: feature:126879-126969:-1:exon
so has part: feature:123673-123843:-1:exon

XP_032058542.1
type: Protein
SIO_000068: ncbiprotein

position:123673:-1
position: 123673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133799-134127:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:132193-132265:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130213-130400:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128217-128328:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127498-127610:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:126879-126969:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:123673-123843:-1:exon

ATP5MC1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: ATP5MC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(135713..137759)
location: region:135713-137759:-1
so has part: feature:135713-137759:-1:exon
subclass of: SO_0000010

116498411
type: Gene
SIO_000068: ncbigene

position:135713:-1
position: 135713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137759:-1
position: 137759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135713-137759:-1:exon

ATP5MC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ATP5MC1
product: ATP synthase membrane subunit c locus 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202673.1
SIO_010081: ATP5MC1
subclass of: SO_0000673
so part of: ATP5MC1
location: complement(join(135713..135956,136291..136466,136743..136820,137459..137507,137680..137759))
location: region:135713-137759:-1
so has part: feature:137680-137759:-1:exon
so has part: feature:137459-137507:-1:exon
so has part: feature:136743-136820:-1:exon
so has part: feature:136291-136466:-1:exon
so has part: feature:135713-135956:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137680-137759:-1:exon

position:137680:-1
position: 137680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:137459-137507:-1:exon

position:137459:-1
position: 137459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137507:-1
position: 137507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:136743-136820:-1:exon

position:136743:-1
position: 136743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136820:-1
position: 136820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:136291-136466:-1:exon

position:136291:-1
position: 136291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136466:-1
position: 136466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:135713-135956:-1:exon

position:135956:-1
position: 135956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP5MC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ATP5MC1
product: ATP synthase membrane subunit c locus 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202675.1
SIO_010081: ATP5MC1
subclass of: SO_0000673
so part of: ATP5MC1
location: complement(join(135713..135956,136291..136466,136743..136820,137459..137507,137622..137680))
location: region:135713-137680:-1
so has part: feature:137622-137680:-1:exon
so has part: feature:137459-137507:-1:exon
so has part: feature:136743-136820:-1:exon
so has part: feature:136291-136466:-1:exon
so has part: feature:135713-135956:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137622-137680:-1:exon

position:137622:-1
position: 137622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:137459-137507:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:136743-136820:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:136291-136466:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:135713-135956:-1:exon

ATP5MC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: ATP5MC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase F(0) complex subunit C1, mitochondrial isoform X1
translation: MPRAARGDSQWAWRTRWDTARETTMQTPVALLGSPALFRCCSRALARPVPVSVFSRPEAQTVQPAGVSYPQLSRREFQTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM
SIO_010081: ATP5MC1
subclass of: SO_0000673
so part of: ATP5MC1
location: complement(join(135842..135956,136291..136466,136743..136820,137459..137507,137680..137741))
location: region:135842-137741:-1
so has part: feature:137680-137741:-1:exon
so has part: feature:137459-137507:-1:exon
so has part: feature:136743-136820:-1:exon
so has part: feature:136291-136466:-1:exon
so has part: feature:135842-135956:-1:exon

XP_032058564.1
type: Protein
SIO_000068: ncbiprotein

position:135842:-1
position: 135842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137741:-1
position: 137741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137680-137741:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137459-137507:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:136743-136820:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:136291-136466:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:135842-135956:-1:exon

ATP5MC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: ATP5MC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase F(0) complex subunit C1, mitochondrial isoform X2
translation: MQTPVALLGSPALFRCCSRALARPVPVSVFSRPEAQTVQPAGVSYPQLSRREFQTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM
SIO_010081: ATP5MC1
subclass of: SO_0000673
so part of: ATP5MC1
location: complement(join(135842..135956,136291..136466,136743..136820,137459..137497))
location: region:135842-137497:-1
so has part: feature:137459-137497:-1:exon
so has part: feature:136743-136820:-1:exon
so has part: feature:136291-136466:-1:exon
so has part: feature:135842-135956:-1:exon

XP_032058566.1
type: Protein
SIO_000068: ncbiprotein

position:137497:-1
position: 137497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137459-137497:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:136743-136820:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:136291-136466:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:135842-135956:-1:exon

CALCOCO2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: CALCOCO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 138113..150299
location: region:138113-150299:1
so has part: feature:138113-150299:1:exon
subclass of: SO_0000010

116498433
type: Gene
SIO_000068: ncbigene

position:138113:1
position: 138113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150299:1
position: 150299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138113-150299:1:exon

CALCOCO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: CALCOCO2
product: calcium binding and coiled-coil domain 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202708.1
SIO_010081: CALCOCO2
subclass of: SO_0000673
so part of: CALCOCO2
location: join(138113..138255,140991..141179,141697..141799,142166..142299,143019..143144,143631..143758,143869..143959,144732..144854,145593..145679,146727..146822,147519..147660,148059..148096,148634..150299)
location: region:138113-150299:1
so has part: feature:138113-138255:1:exon
so has part: feature:140991-141179:1:exon
so has part: feature:141697-141799:1:exon
so has part: feature:142166-142299:1:exon
so has part: feature:143019-143144:1:exon
so has part: feature:143631-143758:1:exon
so has part: feature:143869-143959:1:exon
so has part: feature:144732-144854:1:exon
so has part: feature:145593-145679:1:exon
so has part: feature:146727-146822:1:exon
so has part: feature:147519-147660:1:exon
so has part: feature:148059-148096:1:exon
so has part: feature:148634-150299:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:138113-138255:1:exon

position:138255:1
position: 138255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:140991-141179:1:exon

position:140991:1
position: 140991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141179:1
position: 141179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:141697-141799:1:exon

position:141697:1
position: 141697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141799:1
position: 141799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:142166-142299:1:exon

position:142166:1
position: 142166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142299:1
position: 142299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:143019-143144:1:exon

position:143019:1
position: 143019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143144:1
position: 143144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:143631-143758:1:exon

position:143631:1
position: 143631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143758:1
position: 143758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:143869-143959:1:exon

position:143869:1
position: 143869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143959:1
position: 143959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:144732-144854:1:exon

position:144732:1
position: 144732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144854:1
position: 144854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:145593-145679:1:exon

position:145593:1
position: 145593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145679:1
position: 145679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:146727-146822:1:exon

position:146727:1
position: 146727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146822:1
position: 146822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:147519-147660:1:exon

position:147519:1
position: 147519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147660:1
position: 147660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:148059-148096:1:exon

position:148059:1
position: 148059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148096:1
position: 148096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:148634-150299:1:exon

position:148634:1
position: 148634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CALCOCO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: CALCOCO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding and coiled-coil domain-containing protein 2
translation: MMDETSDEPPTSAVLLDNCHFSQVIFNNVEKFYVPGGDVICYYTLTHNIVPRGKDWVGIFRVGWKTTREYYTFMWAPLPSDVHGDTAVQQQIQFKAYYLPKDDEYYQFCYIDQDGMVRGASVPFQFRAESEDDILVVTTQGEVEEIELQNKNLLKENEELQATCASLQKQNTELQEELKKTQKLQNGLESLRRSKEELELELNSLKKENKHLKELDECREAELHQFKEQIQNVTSEKVNLETRLKTALDHMDQLQSQVLNYEKDMDNLVRMDHDKTEQLESLKEENRQLCMTVTQQKEQKKELEHRLENLKGTEANLSLRLQSEQQQNRDLMKELEEQRHLFQMLQAKKNESDEEKQKLREENDTLLRHLSQTRDVSSFSAASQAQAPVPTPEAGCLVFGNPYYAAEANLESKVARTDSIRKCPMCNDIFPEDIEASDYEAHVQSHLLECPLCNETFEKSNQQVFDDHIFCHGLE
SIO_010081: CALCOCO2
subclass of: SO_0000673
so part of: CALCOCO2
location: join(140997..141179,141697..141799,142166..142299,143019..143144,143631..143758,143869..143959,144732..144854,145593..145679,146727..146822,147519..147660,148059..148096,148634..148810)
location: region:140997-148810:1
so has part: feature:140997-141179:1:exon
so has part: feature:141697-141799:1:exon
so has part: feature:142166-142299:1:exon
so has part: feature:143019-143144:1:exon
so has part: feature:143631-143758:1:exon
so has part: feature:143869-143959:1:exon
so has part: feature:144732-144854:1:exon
so has part: feature:145593-145679:1:exon
so has part: feature:146727-146822:1:exon
so has part: feature:147519-147660:1:exon
so has part: feature:148059-148096:1:exon
so has part: feature:148634-148810:1:exon

XP_032058599.1
type: Protein
SIO_000068: ncbiprotein

position:140997:1
position: 140997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148810:1
position: 148810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140997-141179:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:141697-141799:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142166-142299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:143019-143144:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143631-143758:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:143869-143959:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:144732-144854:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:145593-145679:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:146727-146822:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:147519-147660:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:148059-148096:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:148634-148810:1:exon

LOC116498434
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116498434
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(149317..156855)
location: region:149317-156855:-1
so has part: feature:149317-156855:-1:exon
subclass of: SO_0000011

116498434
type: Gene
SIO_000068: ncbigene

position:149317:-1
position: 149317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156855:-1
position: 156855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149317-156855:-1:exon

LOC116498434
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116498434
product: uncharacterized LOC116498434
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004254178.1
SIO_010081: LOC116498434
subclass of: SO_0000673
so part of: LOC116498434
location: complement(join(149317..152662,156477..156855))
location: region:149317-156855:-1
so has part: feature:156477-156855:-1:exon
so has part: feature:149317-152662:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:156477-156855:-1:exon

position:156477:-1
position: 156477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:149317-152662:-1:exon

position:152662:-1
position: 152662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXB13
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: HOXB13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 182284..183796
location: region:182284-183796:1
so has part: feature:182284-183796:1:exon
subclass of: SO_0000010

116498251
type: Gene
SIO_000068: ncbigene

position:182284:1
position: 182284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183796:1
position: 183796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182284-183796:1:exon

HOXB13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: HOXB13
product: homeobox B13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
transcript id: XM_032202498.1
SIO_010081: HOXB13
subclass of: SO_0000673
so part of: HOXB13
location: join(182284..182755,183543..183796)
location: region:182284-183796:1
so has part: feature:182284-182755:1:exon
so has part: feature:183543-183796:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:182284-182755:1:exon

position:182755:1
position: 182755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:183543-183796:1:exon

position:183543:1
position: 183543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: HOXB13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B13
translation: MNPSYPAEEPAKPCLAAPPGPTAPPGPAASAPLPYGYFGSGYYSCRVARSALKTGPAQGPFPPEKYLDPPAGSEDFQSRPAEFAFYPSYGAPYQPVAGYLDVSVVPGLGGPGEARHETLLPVDGYHQPWALGGSWSGQMCCPKEQGQAGYLLKSAFADATTQLPSDGCSFRRGRKKRVPYSKGQLKELEKEYASSKFITRDKRRKIAAATNLTERQITIWFQNRRVKEKKVVAKIKSSSTP
SIO_010081: HOXB13
subclass of: SO_0000673
so part of: HOXB13
location: join(182284..182755,183543..183796)
location: region:182284-183796:1
so has part: feature:182284-182755:1:exon
so has part: feature:183543-183796:1:exon

XP_032058389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182284-182755:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:183543-183796:1:exon

HOXB9
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: HOXB9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 224680..228928
location: region:224680-228928:1
so has part: feature:224680-228928:1:exon
subclass of: SO_0000010

116498490
type: Gene
SIO_000068: ncbigene

position:224680:1
position: 224680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228928:1
position: 228928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224680-228928:1:exon

HOXB9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: HOXB9
product: homeobox B9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
transcript id: XM_032202789.1
SIO_010081: HOXB9
subclass of: SO_0000673
so part of: HOXB9
location: join(224680..225187,228693..228928)
location: region:224680-228928:1
so has part: feature:224680-225187:1:exon
so has part: feature:228693-228928:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:224680-225187:1:exon

position:225187:1
position: 225187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:228693-228928:1:exon

position:228693:1
position: 228693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: HOXB9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B9
translation: MSISGTLSNYYVDSIISHESEDSPSAKFSSGQYTSSRQAGHNEHLEFPSCSFQPKPPVFSASWTPLNPHSSGTLPAVYHPYIQHQSVPSDSRYLRSWLDPVPRAENLPGQGSVKAEPLLGRPGDVHKQGTQEYNLETSAAREGIVSNQRPSFEDNKVCEGSEDKDRTDQTNPAASWLHARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKKMNKEQGKE
SIO_010081: HOXB9
subclass of: SO_0000673
so part of: HOXB9
location: join(224680..225187,228693..228928)
location: region:224680-228928:1
so has part: feature:224680-225187:1:exon
so has part: feature:228693-228928:1:exon

XP_032058680.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224680-225187:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:228693-228928:1:exon

HOXB8
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: HOXB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 237909..239488
location: region:237909-239488:1
so has part: feature:237909-239488:1:exon
subclass of: SO_0000010

116498621
type: Gene
SIO_000068: ncbigene

position:237909:1
position: 237909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239488:1
position: 239488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237909-239488:1:exon

HOXB8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: HOXB8
product: homeobox B8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
transcript id: XM_032202978.1
SIO_010081: HOXB8
subclass of: SO_0000673
so part of: HOXB8
location: join(237909..238329,239181..239488)
location: region:237909-239488:1
so has part: feature:237909-238329:1:exon
so has part: feature:239181-239488:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237909-238329:1:exon

position:238329:1
position: 238329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:239181-239488:1:exon

position:239181:1
position: 239181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: HOXB8
product: homeobox B8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
transcript id: XM_032202979.1
SIO_010081: HOXB8
subclass of: SO_0000673
so part of: HOXB8
location: join(237909..238329,239184..239488)
location: region:237909-239488:1
so has part: feature:237909-238329:1:exon
so has part: feature:239184-239488:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237909-238329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:239184-239488:1:exon

position:239184:1
position: 239184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: HOXB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B8 isoform X1
translation: MSSYFVNSLFSKYKTGDSLRPNYYDCGFAQDLGGRPTVVYGPSTGGTFQHPTQIQEFYHGASSLSSSPYQQNPCAVACHGDPSNFYGYDPLQRQSLFSAQESDLVQYTDCKLAASGLGEEAESSEQSPSPTQLFPWMRPQAAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELEKQKMERAQEVDEEGEAQKVDKK
SIO_010081: HOXB8
subclass of: SO_0000673
so part of: HOXB8
location: join(237909..238329,239181..239488)
location: region:237909-239488:1
so has part: feature:237909-238329:1:exon
so has part: feature:239181-239488:1:exon

XP_032058869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237909-238329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:239181-239488:1:exon

HOXB8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: HOXB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B8 isoform X2
translation: MSSYFVNSLFSKYKTGDSLRPNYYDCGFAQDLGGRPTVVYGPSTGGTFQHPTQIQEFYHGASSLSSSPYQQNPCAVACHGDPSNFYGYDPLQRQSLFSAQESDLVQYTDCKLAASGLGEEAESSEQSPSPTQLFPWMRPQAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELEKQKMERAQEVDEEGEAQKVDKK
SIO_010081: HOXB8
subclass of: SO_0000673
so part of: HOXB8
location: join(237909..238329,239184..239488)
location: region:237909-239488:1
so has part: feature:237909-238329:1:exon
so has part: feature:239184-239488:1:exon

XP_032058870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237909-238329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:239184-239488:1:exon

HOXB7
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: HOXB7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 242201..245833
location: region:242201-245833:1
so has part: feature:242201-245833:1:exon
subclass of: SO_0000010

116498622
type: Gene
SIO_000068: ncbigene

position:242201:1
position: 242201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245833:1
position: 245833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242201-245833:1:exon

HOXB7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: HOXB7
product: homeobox B7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
transcript id: XM_032202980.1
SIO_010081: HOXB7
subclass of: SO_0000673
so part of: HOXB7
location: join(242201..242600,245580..245833)
location: region:242201-245833:1
so has part: feature:242201-242600:1:exon
so has part: feature:245580-245833:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:242201-242600:1:exon

position:242600:1
position: 242600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:245580-245833:1:exon

position:245580:1
position: 245580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: HOXB7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B7
translation: MSSLYYANALFSKYQAASSVFPSGVFPEQTSCAFASNTQRSGYGAGSTPPFAASMPGLYSSGSAVHPQTPTMYSSGYGLEPSSFNMHCSPFEQNLSMMCPGDVSKQNCNKTDQRDSDLQSDSNFRIYPWMRSTGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTACSGSGSQEKPDVEDDEEE
SIO_010081: HOXB7
subclass of: SO_0000673
so part of: HOXB7
location: join(242201..242600,245580..245833)
location: region:242201-245833:1
so has part: feature:242201-242600:1:exon
so has part: feature:245580-245833:1:exon

XP_032058871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242201-242600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245580-245833:1:exon

HOXB6
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: HOXB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 256240..258330
location: region:256240-258330:1
so has part: feature:256240-258330:1:exon
subclass of: SO_0000010

116498469
type: Gene
SIO_000068: ncbigene

position:256240:1
position: 256240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258330:1
position: 258330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256240-258330:1:exon

HOXB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: HOXB6
product: homeobox B6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
transcript id: XM_032202754.1
SIO_010081: HOXB6
subclass of: SO_0000673
so part of: HOXB6
location: join(256240..256648,258071..258330)
location: region:256240-258330:1
so has part: feature:256240-256648:1:exon
so has part: feature:258071-258330:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:256240-256648:1:exon

position:256648:1
position: 256648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:258071-258330:1:exon

position:258071:1
position: 258071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: HOXB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B6
translation: MSSYFVNSTFPVSLAAGQEPFLGQIPLYPSGYADPLRHYPTTYGATGVQEKGYASSPYYQQSNGAYSRSSACDYGAGGFFREKDPACAPSNLDEVPFAPEPRKSDCAQSKTVFGESEEQKCSAPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWKKENKLLNSSQLSAEEEEEKTAE
SIO_010081: HOXB6
subclass of: SO_0000673
so part of: HOXB6
location: join(256240..256648,258071..258330)
location: region:256240-258330:1
so has part: feature:256240-256648:1:exon
so has part: feature:258071-258330:1:exon

XP_032058645.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256240-256648:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:258071-258330:1:exon

HOXB5
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: HOXB5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 261230..262918
location: region:261230-262918:1
so has part: feature:261230-262918:1:exon
subclass of: SO_0000010

116498471
type: Gene
SIO_000068: ncbigene

position:261230:1
position: 261230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262918:1
position: 262918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261230-262918:1:exon

HOXB5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: HOXB5
product: homeobox B5
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins
transcript id: XM_032202756.1
SIO_010081: HOXB5
subclass of: SO_0000673
so part of: HOXB5
location: join(261230..261775,262671..262918)
location: region:261230-262918:1
so has part: feature:261230-261775:1:exon
so has part: feature:262671-262918:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:261230-261775:1:exon

position:261775:1
position: 261775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:262671-262918:1:exon

position:262671:1
position: 262671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: HOXB5
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: homeobox protein Hox-B5
translation: MSSYFVNSFSGRYPNGPDYQLLNYGTSSSMNGXYRDSSTMHSSSYGYNYNGMDLSINRSASSSHFGAVGESSRGFPSPAQESRFRQASSCSLSSPDSLPCSNSESHGGKPAPSPSDQATSASTNTNFTELDETSASSGADEGTPISSSIPRAQAEPIATSTAATEGQAPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLASAGSAFQP
SIO_010081: HOXB5
subclass of: SO_0000673
so part of: HOXB5
location: join(261230..261775,262671..262918)
location: region:261230-262918:1
so has part: feature:261230-261775:1:exon
so has part: feature:262671-262918:1:exon

XP_032058647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261230-261775:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:262671-262918:1:exon

HOXB4
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: HOXB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 278052..279621
location: region:278052-279621:1
so has part: feature:278052-279621:1:exon
subclass of: SO_0000010

116498253
type: Gene
SIO_000068: ncbigene

position:278052:1
position: 278052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279621:1
position: 279621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278052-279621:1:exon

HOXB4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: HOXB4
product: homeobox B4
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 5 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 15% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032202499.1
SIO_010081: HOXB4
subclass of: SO_0000673
so part of: HOXB4
location: join(278052..278470,279262..279621)
location: region:278052-279621:1
so has part: feature:278052-278470:1:exon
so has part: feature:279262-279621:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:278052-278470:1:exon

position:278470:1
position: 278470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:279262-279621:1:exon

position:279262:1
position: 279262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: HOXB4
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 5 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: homeobox protein Hox-B4
translation: MAMSSFLINSNYVDPKFPPCEEYSHSDYLPNHSPEYYSSQRRESTFQHEAMYQPRSACNEQLYSSCQSSGHQAAVLSPRGHVHPPAGLQATSLSQTICEPVTPSPPPSCSQNSLNQSPSNSSQEPVVYPWMKKVHVSTVNPNYSGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSNPSTSSASLQIPQGGSQVRSSGPSHQPITIRCMDEVCACGV
SIO_010081: HOXB4
subclass of: SO_0000673
so part of: HOXB4
location: join(278052..278470,279262..279621)
location: region:278052-279621:1
so has part: feature:278052-278470:1:exon
so has part: feature:279262-279621:1:exon

XP_032058390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278052-278470:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:279262-279621:1:exon

HOXB3
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: HOXB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 302643..304895
location: region:302643-304895:1
so has part: feature:302643-304895:1:exon
subclass of: SO_0000010

116498522
type: Gene
SIO_000068: ncbigene

position:302643:1
position: 302643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304895:1
position: 304895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302643-304895:1:exon

HOXB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: HOXB3
product: homeobox B3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_032202834.1
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(302643..303078,304131..304895)
location: region:302643-304895:1
so has part: feature:302643-303078:1:exon
so has part: feature:304131-304895:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:302643-303078:1:exon

position:303078:1
position: 303078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:304131-304895:1:exon

position:304131:1
position: 304131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: HOXB3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: homeobox protein Hox-B3
translation: MQKTTYYDSSTLFGGYSYGSTNGFGYEGPQQPFQPGSHVEGDYQRSACSLQSLGNTTPHAKSKDLNGSCMRPSLPQEHHPPPTVSPPPNPATNSTSNNSNNQSGSSKSAPSKANLSANASLTKQIFPWMKESRQNSKQKNTSPSTAETCSGEKSPPGSSASKRXRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKSKGMGSSSGGPSPTSSPPQPMQSSAGFMNALHTMSSNYDAPSPPSFNKPHQNAYAMPTNYQNPIKGCPSQQKYTNTAPEYDPHVLQGNGVAYGTPSMQGSPVYVGGNYVDSMPTSGPSLYGLNHLPHPQAASMDYSGPPQMPPSQHHGPCETHPTYTDLSTHHAXSQGRIQEAPKLTHL
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(302643..303078,304131..304895)
location: region:302643-304895:1
so has part: feature:302643-303078:1:exon
so has part: feature:304131-304895:1:exon

XP_032058725.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:302643-303078:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:304131-304895:1:exon

HOXB2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: HOXB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 309376..311633
location: region:309376-311633:1
so has part: feature:309376-311633:1:exon
subclass of: SO_0000010

116498523
type: Gene
SIO_000068: ncbigene

position:309376:1
position: 309376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311633:1
position: 311633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309376-311633:1:exon

HOXB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: HOXB2
product: homeobox B2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032202835.1
SIO_010081: HOXB2
subclass of: SO_0000673
so part of: HOXB2
location: join(309376..309928,310715,311038..311633)
location: region:309376-311633:1
so has part: feature:309376-309928:1:exon
so has part: feature:310715-310715:1:exon
so has part: feature:311038-311633:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:309376-309928:1:exon

position:309928:1
position: 309928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:310715-310715:1:exon

position:310715:1
position: 310715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:311038-311633:1:exon

position:311038:1
position: 311038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: HOXB2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: homeobox protein Hox-B2
translation: MNFEFEREIGFINSQPSLAECLTSLPAVLETFQTSSIKNSTLIPPPFEQTVLSLNPCSSSQGRPRSQKRASHGLLQPQPPAQPGPLAAEFPWMKEKKSSKKATQAPSSSSSSSPPSSSSLPIPAAGSPQDTQGLADTSGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTRHKEPPDGDXPLPGPDEGSDPLDEAEDGPAMGPSRGQARPEPPGGPRSPAQPRAAASRPQRARPGGRDSPSLPELGIFSAEPCLQLSPDLQDSLGSPVHFSEEDLDFFASALCAAELQQLNFQ
SIO_010081: HOXB2
subclass of: SO_0000673
so part of: HOXB2
location: join(309542..309928,310715,311038..311618)
location: region:309542-311618:1
so has part: feature:309542-309928:1:exon
so has part: feature:310715-310715:1:exon
so has part: feature:311038-311618:1:exon

XP_032058726.1
type: Protein
SIO_000068: ncbiprotein

position:309542:1
position: 309542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311618:1
position: 311618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309542-309928:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310715-310715:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311038-311618:1:exon

HOXB1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: HOXB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 320663..322319
location: region:320663-322319:1
so has part: feature:320663-322319:1:exon
subclass of: SO_0000010

116498524
type: Gene
SIO_000068: ncbigene

position:320663:1
position: 320663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322319:1
position: 322319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320663-322319:1:exon

HOXB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: HOXB1
product: homeobox B1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_032202836.1
SIO_010081: HOXB1
subclass of: SO_0000673
so part of: HOXB1
location: join(320663..321265,321994..322319)
location: region:320663-322319:1
so has part: feature:320663-321265:1:exon
so has part: feature:321994-322319:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:320663-321265:1:exon

position:321265:1
position: 321265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:321994-322319:1:exon

position:321994:1
position: 321994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: HOXB1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: homeobox protein Hox-B1
translation: MDNTRMNSFLEYAICNRGTGAYHHLEQSSPSFPSCSGSPATDTFHGDGRFGXGGSAAAAAQLPQQGPGFAPAPAGRAVPFAGAAPAAGYPAATCGAGYGPPPLYLGAQEPDAGYLPAAGYAASAGPHLGSIAEGYGGAAAGHYPQHLYGQEQPGFLAGLYGSLSPAPSEDKDPACPSEPCPSAGTTQTFDWMKVKRNPPKTAKVSEYGLLGQPNTIRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKREKEGLAPAAASRSAKEASEASDQSNCTSPEASPSSVSS
SIO_010081: HOXB1
subclass of: SO_0000673
so part of: HOXB1
location: join(320663..321265,321994..322319)
location: region:320663-322319:1
so has part: feature:320663-321265:1:exon
so has part: feature:321994-322319:1:exon

XP_032058727.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:320663-321265:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:321994-322319:1:exon

SKAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: SKAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 373850..517135
location: region:373850-517135:1
so has part: feature:373850-517135:1:exon
subclass of: SO_0000010

116498452
type: Gene
SIO_000068: ncbigene

position:373850:1
position: 373850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517135:1
position: 517135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373850-517135:1:exon

SKAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SKAP1
product: src kinase associated phosphoprotein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202734.1
SIO_010081: SKAP1
subclass of: SO_0000673
so part of: SKAP1
location: join(373850..373898,380292..380397,390720..390745,404047..404163,490537..490617,491865..491948,493799..493923,494677..494740,495768..495923,499769..499825,505116..505228,516295..516412,516893..517135)
location: region:373850-517135:1
so has part: feature:373850-373898:1:exon
so has part: feature:380292-380397:1:exon
so has part: feature:390720-390745:1:exon
so has part: feature:404047-404163:1:exon
so has part: feature:490537-490617:1:exon
so has part: feature:491865-491948:1:exon
so has part: feature:493799-493923:1:exon
so has part: feature:494677-494740:1:exon
so has part: feature:495768-495923:1:exon
so has part: feature:499769-499825:1:exon
so has part: feature:505116-505228:1:exon
so has part: feature:516295-516412:1:exon
so has part: feature:516893-517135:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:373850-373898:1:exon

position:373898:1
position: 373898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:380292-380397:1:exon

position:380292:1
position: 380292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380397:1
position: 380397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:390720-390745:1:exon

position:390720:1
position: 390720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390745:1
position: 390745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:404047-404163:1:exon

position:404047:1
position: 404047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404163:1
position: 404163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:490537-490617:1:exon

position:490537:1
position: 490537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490617:1
position: 490617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:491865-491948:1:exon

position:491865:1
position: 491865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491948:1
position: 491948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:493799-493923:1:exon

position:493799:1
position: 493799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493923:1
position: 493923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:494677-494740:1:exon

position:494677:1
position: 494677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494740:1
position: 494740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:495768-495923:1:exon

position:495768:1
position: 495768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495923:1
position: 495923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:499769-499825:1:exon

position:499769:1
position: 499769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499825:1
position: 499825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:505116-505228:1:exon

position:505116:1
position: 505116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505228:1
position: 505228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:516295-516412:1:exon

position:516295:1
position: 516295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516412:1
position: 516412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:516893-517135:1:exon

position:516893:1
position: 516893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SKAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SKAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: src kinase-associated phosphoprotein 1
translation: MLPEEVRRLLEDAECYLADGLQNENLSPNAREQRDAILFSFQQVKARYHLEFLPRGEDQHDAGFGQDSSDENQSWSLAPSMTSDVSLPSDFLDDGLEEVTPRPVQDTGNILKQGYLEKRSRDHSFFGSEWQKRWCVLNKRTFYYYANEKSKQPKGTFSIEQYSARLAFHLRKDSRRRCCFELICPGKRTYEFTAPSPAEAEDWVDQIQFLLKDLSSLTIPYDEEDEEELYNDVDSSDSVTTASHNTTLNPDDGMEEDDVYEVFPEKEPSIPEDSEDAGSGQRNGGPQRDYANYYQGLWDCSGEHPNELSFHRGDLIYILSKEYNMYGWWVGELNNTVGIVPKDYLVAAYDLEE
SIO_010081: SKAP1
subclass of: SO_0000673
so part of: SKAP1
location: join(373865..373898,380292..380397,390720..390745,404047..404163,490537..490617,491865..491948,493799..493923,494677..494740,495768..495923,499769..499825,505116..505228,516295..516393)
location: region:373865-516393:1
so has part: feature:373865-373898:1:exon
so has part: feature:380292-380397:1:exon
so has part: feature:390720-390745:1:exon
so has part: feature:404047-404163:1:exon
so has part: feature:490537-490617:1:exon
so has part: feature:491865-491948:1:exon
so has part: feature:493799-493923:1:exon
so has part: feature:494677-494740:1:exon
so has part: feature:495768-495923:1:exon
so has part: feature:499769-499825:1:exon
so has part: feature:505116-505228:1:exon
so has part: feature:516295-516393:1:exon

XP_032058625.1
type: Protein
SIO_000068: ncbiprotein

position:373865:1
position: 373865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516393:1
position: 516393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373865-373898:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:380292-380397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:390720-390745:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:404047-404163:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:490537-490617:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:491865-491948:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:493799-493923:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:494677-494740:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:495768-495923:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:499769-499825:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:505116-505228:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:516295-516393:1:exon

SNX11
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: SNX11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(519372..523062)
location: region:519372-523062:-1
so has part: feature:519372-523062:-1:exon
subclass of: SO_0000010

116498445
type: Gene
SIO_000068: ncbigene

position:519372:-1
position: 519372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523062:-1
position: 523062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519372-523062:-1:exon

SNX11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SNX11
product: sorting nexin 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202721.1
SIO_010081: SNX11
subclass of: SO_0000673
so part of: SNX11
location: complement(join(519372..520428,521156..521368,521548..521646,521808..521908,522256..522342,522591..522639,523002..523062))
location: region:519372-523062:-1
so has part: feature:523002-523062:-1:exon
so has part: feature:522591-522639:-1:exon
so has part: feature:522256-522342:-1:exon
so has part: feature:521808-521908:-1:exon
so has part: feature:521548-521646:-1:exon
so has part: feature:521156-521368:-1:exon
so has part: feature:519372-520428:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:523002-523062:-1:exon

position:523002:-1
position: 523002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:522591-522639:-1:exon

position:522591:-1
position: 522591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522639:-1
position: 522639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:522256-522342:-1:exon

position:522256:-1
position: 522256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522342:-1
position: 522342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:521808-521908:-1:exon

position:521808:-1
position: 521808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521908:-1
position: 521908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:521548-521646:-1:exon

position:521548:-1
position: 521548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521646:-1
position: 521646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:521156-521368:-1:exon

position:521156:-1
position: 521156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521368:-1
position: 521368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:519372-520428:-1:exon

position:520428:-1
position: 520428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNX11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SNX11
product: sorting nexin 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032202722.1
SIO_010081: SNX11
subclass of: SO_0000673
so part of: SNX11
location: complement(join(519372..520428,521156..521368,521548..521646,521808..521908,522256..522342,522591..522639,522946..522969))
location: region:519372-522969:-1
so has part: feature:522946-522969:-1:exon
so has part: feature:522591-522639:-1:exon
so has part: feature:522256-522342:-1:exon
so has part: feature:521808-521908:-1:exon
so has part: feature:521548-521646:-1:exon
so has part: feature:521156-521368:-1:exon
so has part: feature:519372-520428:-1:exon

position:522969:-1
position: 522969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522946-522969:-1:exon

position:522946:-1
position: 522946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:522591-522639:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:522256-522342:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:521808-521908:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:521548-521646:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:521156-521368:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:519372-520428:-1:exon

SNX11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SNX11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-11
translation: MLEGPEEELTTVRVQDPRVQNEGSWNSYVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRRQLQKNAGLVPVPELPGKSAFFVGSTDEFIEKRRQGLQQFLEKVVQNVVLLSDSRLHLFLQSQLSVPEIEACVQGRGTQTVTDAILHYAMSNCGWAQEEESRPALLPGGALRGSCARLGGPQGPGCLEPLPHWSDFGMDESRLDSPAEPAEPLGGPQEGQ
SIO_010081: SNX11
subclass of: SO_0000673
so part of: SNX11
location: complement(join(520287..520428,521156..521368,521548..521646,521808..521908,522256..522342,522591..522611))
location: region:520287-522611:-1
so has part: feature:522591-522611:-1:exon
so has part: feature:522256-522342:-1:exon
so has part: feature:521808-521908:-1:exon
so has part: feature:521548-521646:-1:exon
so has part: feature:521156-521368:-1:exon
so has part: feature:520287-520428:-1:exon

XP_032058612.1
type: Protein
SIO_000068: ncbiprotein

position:520287:-1
position: 520287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522611:-1
position: 522611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522591-522611:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:522256-522342:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:521808-521908:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:521548-521646:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:521156-521368:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:520287-520428:-1:exon

SNX11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SNX11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-11
translation: MLEGPEEELTTVRVQDPRVQNEGSWNSYVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRRQLQKNAGLVPVPELPGKSAFFVGSTDEFIEKRRQGLQQFLEKVVQNVVLLSDSRLHLFLQSQLSVPEIEACVQGRGTQTVTDAILHYAMSNCGWAQEEESRPALLPGGALRGSCARLGGPQGPGCLEPLPHWSDFGMDESRLDSPAEPAEPLGGPQEGQ
SIO_010081: SNX11
subclass of: SO_0000673
so part of: SNX11
location: complement(join(520287..520428,521156..521368,521548..521646,521808..521908,522256..522342,522591..522611))
location: region:520287-522611:-1
so has part: feature:522591-522611:-1:exon
so has part: feature:522256-522342:-1:exon
so has part: feature:521808-521908:-1:exon
so has part: feature:521548-521646:-1:exon
so has part: feature:521156-521368:-1:exon
so has part: feature:520287-520428:-1:exon

XP_032058613.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:522591-522611:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:522256-522342:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:521808-521908:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:521548-521646:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:521156-521368:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:520287-520428:-1:exon

CBX1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: CBX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 523412..529978
location: region:523412-529978:1
so has part: feature:523412-529978:1:exon
subclass of: SO_0000010

116498430
type: Gene
SIO_000068: ncbigene

position:523412:1
position: 523412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529978:1
position: 529978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523412-529978:1:exon

CBX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: CBX1
product: chromobox 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202704.1
SIO_010081: CBX1
subclass of: SO_0000673
so part of: CBX1
location: join(523412..523529,527187..527362,527811..527988,528654..528748,529372..529978)
location: region:523412-529978:1
so has part: feature:523412-523529:1:exon
so has part: feature:527187-527362:1:exon
so has part: feature:527811-527988:1:exon
so has part: feature:528654-528748:1:exon
so has part: feature:529372-529978:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:523412-523529:1:exon

position:523529:1
position: 523529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:527187-527362:1:exon

position:527187:1
position: 527187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527362:1
position: 527362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:527811-527988:1:exon

position:527811:1
position: 527811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527988:1
position: 527988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:528654-528748:1:exon

position:528654:1
position: 528654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528748:1
position: 528748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:529372-529978:1:exon

position:529372:1
position: 529372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CBX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: CBX1
product: chromobox 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202705.1
SIO_010081: CBX1
subclass of: SO_0000673
so part of: CBX1
location: join(523412..523529,527190..527362,527811..527988,528654..528748,529372..529978)
location: region:523412-529978:1
so has part: feature:523412-523529:1:exon
so has part: feature:527190-527362:1:exon
so has part: feature:527811-527988:1:exon
so has part: feature:528654-528748:1:exon
so has part: feature:529372-529978:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:523412-523529:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:527190-527362:1:exon

position:527190:1
position: 527190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:527811-527988:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:528654-528748:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:529372-529978:1:exon

CBX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: CBX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromobox protein homolog 1
translation: MGKKQNKKKVEEVLEEEEEEYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTAHESEKSEGSKRKAESDTEDKGEESKPKKKKEESEKPRGFARGFEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANIKCPQVVISFYEERLTWHSYPSEDDDKKEDKN
SIO_010081: CBX1
subclass of: SO_0000673
so part of: CBX1
location: join(527223..527362,527811..527988,528654..528748,529372..529516)
location: region:527223-529516:1
so has part: feature:527223-527362:1:exon
so has part: feature:527811-527988:1:exon
so has part: feature:528654-528748:1:exon
so has part: feature:529372-529516:1:exon

XP_032058595.1
type: Protein
SIO_000068: ncbiprotein

position:527223:1
position: 527223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529516:1
position: 529516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527223-527362:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:527811-527988:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:528654-528748:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529372-529516:1:exon

CBX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: CBX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromobox protein homolog 1
translation: MGKKQNKKKVEEVLEEEEEEYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTAHESEKSEGSKRKAESDTEDKGEESKPKKKKEESEKPRGFARGFEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANIKCPQVVISFYEERLTWHSYPSEDDDKKEDKN
SIO_010081: CBX1
subclass of: SO_0000673
so part of: CBX1
location: join(527223..527362,527811..527988,528654..528748,529372..529516)
location: region:527223-529516:1
so has part: feature:527223-527362:1:exon
so has part: feature:527811-527988:1:exon
so has part: feature:528654-528748:1:exon
so has part: feature:529372-529516:1:exon

XP_032058596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:527223-527362:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:527811-527988:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:528654-528748:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529372-529516:1:exon

NFE2L1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: NFE2L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(533694..542910)
location: region:533694-542910:-1
so has part: feature:533694-542910:-1:exon
subclass of: SO_0000010

116498413
type: Gene
SIO_000068: ncbigene

position:533694:-1
position: 533694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542910:-1
position: 542910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533694-542910:-1:exon

NFE2L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: NFE2L1
product: nuclear factor, erythroid 2 like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032202678.1
SIO_010081: NFE2L1
subclass of: SO_0000673
so part of: NFE2L1
location: complement(join(533694..536864,537307..537468,537843..537932,538488..538703,541829..542340,542894..542910))
location: region:533694-542910:-1
so has part: feature:542894-542910:-1:exon
so has part: feature:541829-542340:-1:exon
so has part: feature:538488-538703:-1:exon
so has part: feature:537843-537932:-1:exon
so has part: feature:537307-537468:-1:exon
so has part: feature:533694-536864:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:542894-542910:-1:exon

position:542894:-1
position: 542894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:541829-542340:-1:exon

position:541829:-1
position: 541829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542340:-1
position: 542340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:538488-538703:-1:exon

position:538488:-1
position: 538488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538703:-1
position: 538703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:537843-537932:-1:exon

position:537843:-1
position: 537843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537932:-1
position: 537932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:537307-537468:-1:exon

position:537307:-1
position: 537307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537468:-1
position: 537468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:533694-536864:-1:exon

position:536864:-1
position: 536864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NFE2L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: NFE2L1
product: nuclear factor, erythroid 2 like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202677.1
SIO_010081: NFE2L1
subclass of: SO_0000673
so part of: NFE2L1
location: complement(join(533694..536864,537307..537468,537843..537932,538488..538703,541829..542340,542659..542679))
location: region:533694-542679:-1
so has part: feature:542659-542679:-1:exon
so has part: feature:541829-542340:-1:exon
so has part: feature:538488-538703:-1:exon
so has part: feature:537843-537932:-1:exon
so has part: feature:537307-537468:-1:exon
so has part: feature:533694-536864:-1:exon

position:542679:-1
position: 542679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542659-542679:-1:exon

position:542659:-1
position: 542659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:541829-542340:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:538488-538703:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537843-537932:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:537307-537468:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533694-536864:-1:exon

NFE2L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: NFE2L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum membrane sensor NFE2L1
translation: MLSLKKYFTEGLIQFTILLSLIGVRVDVDTYLTSQLPPLREIILGQSSAYTQTQFHNLRNTLDGYGIHPKSVDLDYYFTARRLLNQVRALDRFQVPTTEVSAWLVHRDPEGSVSGTQPSAGIALENGGGLQDGSGPDGGVRESGAEQGFGEELEDLGAVAPPVNGDLTKEDIDLIDILWRQDIDLGAGREIFDYSHRQKESEVDKELSDGRERGDGWRSAGSQGLDRNLLVDGETGESFPAQVPGAEDQTALSLEECLRLLEATFPFGENSEFPAADVSTLSEAVPSESRPAGIQSSLLSPLLPETESPFDLEQQWQDLMSIMEMQAMEVNNTTAETLYNGTGGDLLASNYSLAPNTPINQNVSLHQASLGSCSQDFSLFSSEIESPSMAGSSALLQLAPDNSTGLNTTFSSTNLSGIFFPPQLNSTVNETAGPELPDPLGGLLDEAMLDEISLMDLAIEEGFNPVQASQLEEEFDSDSGLSLDSGHSPASLSSSEASSSSSSSSSSSSSSSSSSSSSFSEEGAVGYSSDSENVDFEETEGAVGYQPEYSKFCRMSYQDPSQLHYLPYLEHVGHNHTYNMAPGALDPEEPKLPSAGKKSSKEKPSEFLDKQMSRDEHRARAMKIPFTNDKIINLPVEEFNELLSKYQLSEAQLSLIRDIRRRGKNKMAAQNCRKRKLDTILNLERDVEDLQRDKSKLLREKVEFLKSIRQMKQKVQNLYQEVFGRLRDENGQPYSPNQYALQYASDGSVILIPRTLADQQARRQERKQKDRRK
SIO_010081: NFE2L1
subclass of: SO_0000673
so part of: NFE2L1
location: complement(join(535521..536864,537307..537468,537843..537932,538488..538703,541829..542338))
location: region:535521-542338:-1
so has part: feature:541829-542338:-1:exon
so has part: feature:538488-538703:-1:exon
so has part: feature:537843-537932:-1:exon
so has part: feature:537307-537468:-1:exon
so has part: feature:535521-536864:-1:exon

XP_032058568.1
type: Protein
SIO_000068: ncbiprotein

position:535521:-1
position: 535521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542338:-1
position: 542338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541829-542338:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:538488-538703:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537843-537932:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537307-537468:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:535521-536864:-1:exon

NFE2L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: NFE2L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum membrane sensor NFE2L1
translation: MLSLKKYFTEGLIQFTILLSLIGVRVDVDTYLTSQLPPLREIILGQSSAYTQTQFHNLRNTLDGYGIHPKSVDLDYYFTARRLLNQVRALDRFQVPTTEVSAWLVHRDPEGSVSGTQPSAGIALENGGGLQDGSGPDGGVRESGAEQGFGEELEDLGAVAPPVNGDLTKEDIDLIDILWRQDIDLGAGREIFDYSHRQKESEVDKELSDGRERGDGWRSAGSQGLDRNLLVDGETGESFPAQVPGAEDQTALSLEECLRLLEATFPFGENSEFPAADVSTLSEAVPSESRPAGIQSSLLSPLLPETESPFDLEQQWQDLMSIMEMQAMEVNNTTAETLYNGTGGDLLASNYSLAPNTPINQNVSLHQASLGSCSQDFSLFSSEIESPSMAGSSALLQLAPDNSTGLNTTFSSTNLSGIFFPPQLNSTVNETAGPELPDPLGGLLDEAMLDEISLMDLAIEEGFNPVQASQLEEEFDSDSGLSLDSGHSPASLSSSEASSSSSSSSSSSSSSSSSSSSSFSEEGAVGYSSDSENVDFEETEGAVGYQPEYSKFCRMSYQDPSQLHYLPYLEHVGHNHTYNMAPGALDPEEPKLPSAGKKSSKEKPSEFLDKQMSRDEHRARAMKIPFTNDKIINLPVEEFNELLSKYQLSEAQLSLIRDIRRRGKNKMAAQNCRKRKLDTILNLERDVEDLQRDKSKLLREKVEFLKSIRQMKQKVQNLYQEVFGRLRDENGQPYSPNQYALQYASDGSVILIPRTLADQQARRQERKQKDRRK
SIO_010081: NFE2L1
subclass of: SO_0000673
so part of: NFE2L1
location: complement(join(535521..536864,537307..537468,537843..537932,538488..538703,541829..542338))
location: region:535521-542338:-1
so has part: feature:541829-542338:-1:exon
so has part: feature:538488-538703:-1:exon
so has part: feature:537843-537932:-1:exon
so has part: feature:537307-537468:-1:exon
so has part: feature:535521-536864:-1:exon

XP_032058569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:541829-542338:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:538488-538703:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537843-537932:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537307-537468:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:535521-536864:-1:exon

COPZ2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: COPZ2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 543394..546144
location: region:543394-546144:1
so has part: feature:543394-546144:1:exon
subclass of: SO_0000010

116498254
type: Gene
SIO_000068: ncbigene

position:543394:1
position: 543394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546144:1
position: 546144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543394-546144:1:exon

COPZ2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: COPZ2
product: COPI coat complex subunit zeta 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032202500.1
SIO_010081: COPZ2
subclass of: SO_0000673
so part of: COPZ2
location: join(543394..543494,544645..544825,544936..545017,545112..545203,545268..545323,545441..545518,545780..545831,545911..546144)
location: region:543394-546144:1
so has part: feature:543394-543494:1:exon
so has part: feature:544645-544825:1:exon
so has part: feature:544936-545017:1:exon
so has part: feature:545112-545203:1:exon
so has part: feature:545268-545323:1:exon
so has part: feature:545441-545518:1:exon
so has part: feature:545780-545831:1:exon
so has part: feature:545911-546144:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:543394-543494:1:exon

position:543494:1
position: 543494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:544645-544825:1:exon

position:544645:1
position: 544645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544825:1
position: 544825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:544936-545017:1:exon

position:544936:1
position: 544936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545017:1
position: 545017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:545112-545203:1:exon

position:545112:1
position: 545112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545203:1
position: 545203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:545268-545323:1:exon

position:545268:1
position: 545268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545323:1
position: 545323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:545441-545518:1:exon

position:545441:1
position: 545441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545518:1
position: 545518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:545780-545831:1:exon

position:545780:1
position: 545780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545831:1
position: 545831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:545911-546144:1:exon

position:545911:1
position: 545911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COPZ2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: COPZ2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coatomer subunit zeta-2
translation: MAPPAPGPLGRGLRGTGAEPGPAPPRLAENGPERGGDPRGTGGWGGTGAPRQRQTGPSCGQSGGAEPLRPQEPSLYTVKALLVLDSCGQRLLAKYYDGSFPTAQEQAAFESSVFSKTRGAGGEIACLDGLTVVYRSSSDLLFCVVGGPQENELMLSAVLGCLCDALGLVLRKDLEKRWLLKNLDGALLVLDEIVDGGVILESDPQRVLQRLGPRAPEPAPYGFVLFDYLAGSREQGGAGGADPPK
SIO_010081: COPZ2
subclass of: SO_0000673
so part of: COPZ2
location: join(543394..543494,544645..544825,544936..545017,545112..545203,545268..545323,545441..545518,545780..545831,545911..546006)
location: region:543394-546006:1
so has part: feature:543394-543494:1:exon
so has part: feature:544645-544825:1:exon
so has part: feature:544936-545017:1:exon
so has part: feature:545112-545203:1:exon
so has part: feature:545268-545323:1:exon
so has part: feature:545441-545518:1:exon
so has part: feature:545780-545831:1:exon
so has part: feature:545911-546006:1:exon

XP_032058391.1
type: Protein
SIO_000068: ncbiprotein

position:546006:1
position: 546006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543394-543494:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:544645-544825:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544936-545017:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:545112-545203:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:545268-545323:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:545441-545518:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:545780-545831:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:545911-546006:1:exon

CDK5RAP3
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: CDK5RAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(547263..550519)
location: region:547263-550519:-1
so has part: feature:547263-550519:-1:exon
subclass of: SO_0000010

116498479
type: Gene
SIO_000068: ncbigene

position:547263:-1
position: 547263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550519:-1
position: 550519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547263-550519:-1:exon

CDK5RAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: CDK5RAP3
product: CDK5 regulatory subunit associated protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032202767.1
SIO_010081: CDK5RAP3
subclass of: SO_0000673
so part of: CDK5RAP3
location: complement(join(547263..547389,547459..547630,547736..547941,548029..548117,548266..548338,548463..548573,548839..548983,549100..549236,549416..549594,549705..549753,549836..549936,550025..550156,550302..550359,550484..550519))
location: region:547263-550519:-1
so has part: feature:550484-550519:-1:exon
so has part: feature:550302-550359:-1:exon
so has part: feature:550025-550156:-1:exon
so has part: feature:549836-549936:-1:exon
so has part: feature:549705-549753:-1:exon
so has part: feature:549416-549594:-1:exon
so has part: feature:549100-549236:-1:exon
so has part: feature:548839-548983:-1:exon
so has part: feature:548463-548573:-1:exon
so has part: feature:548266-548338:-1:exon
so has part: feature:548029-548117:-1:exon
so has part: feature:547736-547941:-1:exon
so has part: feature:547459-547630:-1:exon
so has part: feature:547263-547389:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:550484-550519:-1:exon

position:550484:-1
position: 550484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:550302-550359:-1:exon

position:550302:-1
position: 550302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550359:-1
position: 550359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:550025-550156:-1:exon

position:550025:-1
position: 550025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550156:-1
position: 550156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:549836-549936:-1:exon

position:549836:-1
position: 549836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549936:-1
position: 549936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:549705-549753:-1:exon

position:549705:-1
position: 549705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549753:-1
position: 549753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:549416-549594:-1:exon

position:549416:-1
position: 549416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549594:-1
position: 549594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:549100-549236:-1:exon

position:549100:-1
position: 549100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549236:-1
position: 549236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:548839-548983:-1:exon

position:548839:-1
position: 548839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548983:-1
position: 548983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:548463-548573:-1:exon

position:548463:-1
position: 548463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548573:-1
position: 548573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:548266-548338:-1:exon

position:548266:-1
position: 548266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548338:-1
position: 548338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:548029-548117:-1:exon

position:548029:-1
position: 548029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548117:-1
position: 548117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:547736-547941:-1:exon

position:547736:-1
position: 547736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547941:-1
position: 547941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:547459-547630:-1:exon

position:547459:-1
position: 547459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547630:-1
position: 547630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:547263-547389:-1:exon

position:547389:-1
position: 547389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDK5RAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: CDK5RAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDK5 regulatory subunit-associated protein 3
translation: MQAPPQDYRDVPIDIQTSKLLDWLLDRRHCGRRWQAQARLVRQRMEAALRDMPEHPEIRQLLAGSALHYFHCLRIVEILRGTEASTRNLFGRYSSQRMKDWQEIVALYEKENTYLAELASLLVRSVSYEAPALRKQISRCQQAQQDFARREEECQLAAAELRERFYASCKQYGITGDNVRQELLALVKELPSLLSEIGVGASALTEAIELYEACVEFVCESSAEPVLPLLRHVGRRGNTTVYEWRTGLEPVRVERPEVQEVPEQPKEDAIDWGDFTLEPSGASDGAATGGAQDEIDWGIALEPSPQDNGIDWGDGDGDGAQIAVLEAGTEVPEGVACGSEALTVLELAETRNQFLDELMELELFLAQRLAEMEEEADVLAASQFQLAPPALQGQSSARVGSLLASTRALLGQLGTRRMQHLFTILASPRYVDRVSELLQQKLRQAELLLAKREALGQKRQEALAEQGNLEPKLDRLLDRTRELQRLIEADISKRYGGRPVNLMGVCL
SIO_010081: CDK5RAP3
subclass of: SO_0000673
so part of: CDK5RAP3
location: complement(join(547324..547389,547459..547630,547736..547941,548029..548117,548266..548338,548463..548573,548839..548983,549100..549236,549416..549594,549705..549753,549836..549936,550025..550156,550302..550359,550484..550489))
location: region:547324-550489:-1
so has part: feature:550484-550489:-1:exon
so has part: feature:550302-550359:-1:exon
so has part: feature:550025-550156:-1:exon
so has part: feature:549836-549936:-1:exon
so has part: feature:549705-549753:-1:exon
so has part: feature:549416-549594:-1:exon
so has part: feature:549100-549236:-1:exon
so has part: feature:548839-548983:-1:exon
so has part: feature:548463-548573:-1:exon
so has part: feature:548266-548338:-1:exon
so has part: feature:548029-548117:-1:exon
so has part: feature:547736-547941:-1:exon
so has part: feature:547459-547630:-1:exon
so has part: feature:547324-547389:-1:exon

XP_032058658.1
type: Protein
SIO_000068: ncbiprotein

position:547324:-1
position: 547324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550489:-1
position: 550489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550484-550489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:550302-550359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:550025-550156:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:549836-549936:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:549705-549753:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:549416-549594:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:549100-549236:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:548839-548983:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:548463-548573:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:548266-548338:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:548029-548117:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:547736-547941:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:547459-547630:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:547324-547389:-1:exon

PRR15L
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: PRR15L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 551844..552310
location: region:551844-552310:1
so has part: feature:551844-552310:1:exon
subclass of: SO_0000010

116498577
type: Gene
SIO_000068: ncbigene

position:551844:1
position: 551844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552310:1
position: 552310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:551844-552310:1:exon

PRR15L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: PRR15L
product: proline rich 15 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032202911.1
SIO_010081: PRR15L
subclass of: SO_0000673
so part of: PRR15L
location: 551844..552310
location: region:551844-552310:1
so has part: feature:551844-552310:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:551844-552310:1:exon

PRR15L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: PRR15L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich protein 15-like protein
translation: MAESHSWWKLTFLRKRKSMPQVLYDSPDVHAGDGPEGNGEGGTPEYTARLEKIVDKSSKGKHVKVSNSGRFKEKKKVRATLADNPGLCTGSEREEK
SIO_010081: PRR15L
subclass of: SO_0000673
so part of: PRR15L
location: 551844..552134
location: region:551844-552134:1
so has part: feature:551844-552134:1:exon

XP_032058802.1
type: Protein
SIO_000068: ncbiprotein

position:552134:1
position: 552134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:551844-552134:1:exon

PNPO
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: PNPO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(553997..556450)
location: region:553997-556450:-1
so has part: feature:553997-556450:-1:exon
subclass of: SO_0000010

116498440
type: Gene
SIO_000068: ncbigene

position:553997:-1
position: 553997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556450:-1
position: 556450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553997-556450:-1:exon

PNPO
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: PNPO
product: pyridoxamine 5'-phosphate oxidase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202715.1
SIO_010081: PNPO
subclass of: SO_0000673
so part of: PNPO
location: complement(join(553997..554716,554791..554861,554951..555079,555365..555418,555534..555633,555703..555827,556393..556450))
location: region:553997-556450:-1
so has part: feature:556393-556450:-1:exon
so has part: feature:555703-555827:-1:exon
so has part: feature:555534-555633:-1:exon
so has part: feature:555365-555418:-1:exon
so has part: feature:554951-555079:-1:exon
so has part: feature:554791-554861:-1:exon
so has part: feature:553997-554716:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:556393-556450:-1:exon

position:556393:-1
position: 556393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:555703-555827:-1:exon

position:555703:-1
position: 555703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555827:-1
position: 555827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:555534-555633:-1:exon

position:555534:-1
position: 555534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555633:-1
position: 555633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:555365-555418:-1:exon

position:555365:-1
position: 555365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555418:-1
position: 555418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:554951-555079:-1:exon

position:554951:-1
position: 554951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555079:-1
position: 555079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:554791-554861:-1:exon

position:554791:-1
position: 554791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554861:-1
position: 554861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:553997-554716:-1:exon

position:554716:-1
position: 554716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PNPO
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: PNPO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyridoxine-5'-phosphate oxidase
translation: MELGAMRMEYRGAEEAFEERHLASRDPVAQFGAWLAEALRCPAVGEANAMCLATCSRDGKPSARMVLLKGFGQDGFRFFTNRQSRKGRELDSNPFASLVFYWEPLNRQVRIEGSVRRLSEEESEQYFHSRPRSSQIGAVASRQSTVIPDREYLMKRNAELEEKYRDVPVPKPEDWGGYILQPDVVEFWQGQTSRLHDRIVFRRLRDGAEPPGPMTRRGEGEWVFERLAP
SIO_010081: PNPO
subclass of: SO_0000673
so part of: PNPO
location: complement(join(554551..554716,554791..554861,554951..555079,555365..555418,555534..555633,555703..555827,556393..556437))
location: region:554551-556437:-1
so has part: feature:556393-556437:-1:exon
so has part: feature:555703-555827:-1:exon
so has part: feature:555534-555633:-1:exon
so has part: feature:555365-555418:-1:exon
so has part: feature:554951-555079:-1:exon
so has part: feature:554791-554861:-1:exon
so has part: feature:554551-554716:-1:exon

XP_032058606.1
type: Protein
SIO_000068: ncbiprotein

position:554551:-1
position: 554551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556437:-1
position: 556437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556393-556437:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:555703-555827:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555534-555633:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:555365-555418:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:554951-555079:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:554791-554861:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:554551-554716:-1:exon

SP2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: SP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(557392..564293)
location: region:557392-564293:-1
so has part: feature:557392-564293:-1:exon
subclass of: SO_0000010

116498404
type: Gene
SIO_000068: ncbigene

position:557392:-1
position: 557392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564293:-1
position: 564293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557392-564293:-1:exon

SP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SP2
product: Sp2 transcription factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202665.1
SIO_010081: SP2
subclass of: SO_0000673
so part of: SP2
location: complement(join(557392..557580,557911..558104,558199..558373,559796..560090,560562..561521,562032..562103,564242..564293))
location: region:557392-564293:-1
so has part: feature:564242-564293:-1:exon
so has part: feature:562032-562103:-1:exon
so has part: feature:560562-561521:-1:exon
so has part: feature:559796-560090:-1:exon
so has part: feature:558199-558373:-1:exon
so has part: feature:557911-558104:-1:exon
so has part: feature:557392-557580:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:564242-564293:-1:exon

position:564242:-1
position: 564242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:562032-562103:-1:exon

position:562032:-1
position: 562032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562103:-1
position: 562103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:560562-561521:-1:exon

position:560562:-1
position: 560562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561521:-1
position: 561521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:559796-560090:-1:exon

position:559796:-1
position: 559796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560090:-1
position: 560090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:558199-558373:-1:exon

position:558199:-1
position: 558199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558373:-1
position: 558373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:557911-558104:-1:exon

position:557911:-1
position: 557911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558104:-1
position: 558104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:557392-557580:-1:exon

position:557580:-1
position: 557580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp2
translation: MAATAAVSPSEYLQPAASSAQDSQPSPLALLAATCSKIGPPAVEAAVTPPAPPQPTPRKLVPIKPAPLPLGSGKNNLGILSSKGNLFQLQGSQLGASYAGGQLVFAIQNPAVINKGPPRAAANIQYQAVPQLQPPGAPAIQVPPNLANQIQIIPGTNQAILAPSSASHKPVPIKPAPAQKGAASPGQGAGGVVKLPGGGNVALALPVGSLVGAAEPGAQAQVVAESPSKAGRKTRKKAASPGQPAAAVAVAEQVETVLIETTAENIIQAGNNLLIVQSPGSGQPAVVQQVQVVQPKQEPQVVQIPQQALRVVQAASATLPTVPQKSSQNFQIQTTDPAPTQVYFKTPSGELQTVLLQEAPAVPVAPSGTSCGSPVSRSPGGGGKKPVGRKERPLPKIAPAGGVISLSAAQLAAAAQAMQTININGVQVQGVPVTITNSGGQQQLTVQNVSGNNLTISGLSPTQIQLQMEQALAGEAQPGEKRRRMACTCPNCKDGDKRPGDQGKKKHICHIPECGRTFRKTSLLRAHVRLHTGERPFVCNWVFCGKRFTRSDELQRHARTHTGDKRFECAQCQKRFMRSDHLTKHYKTHLVTKNL
SIO_010081: SP2
subclass of: SO_0000673
so part of: SP2
location: complement(join(557480..557580,557911..558104,558199..558373,559796..560090,560562..561521,562032..562094))
location: region:557480-562094:-1
so has part: feature:562032-562094:-1:exon
so has part: feature:560562-561521:-1:exon
so has part: feature:559796-560090:-1:exon
so has part: feature:558199-558373:-1:exon
so has part: feature:557911-558104:-1:exon
so has part: feature:557480-557580:-1:exon

XP_032058556.1
type: Protein
SIO_000068: ncbiprotein

position:557480:-1
position: 557480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562094:-1
position: 562094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562032-562094:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:560562-561521:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:559796-560090:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:558199-558373:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:557911-558104:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:557480-557580:-1:exon

SP6
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: SP6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 572574..573649
location: region:572574-573649:1
so has part: feature:572574-573649:1:exon
subclass of: SO_0000010

116498406
type: Gene
SIO_000068: ncbigene

position:572574:1
position: 572574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573649:1
position: 573649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572574-573649:1:exon

SP6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SP6
product: Sp6 transcription factor
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_032202669.1
SIO_010081: SP6
subclass of: SO_0000673
so part of: SP6
location: 572574..573649
location: region:572574-573649:1
so has part: feature:572574-573649:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:572574-573649:1:exon

SP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SP6
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: transcription factor Sp6
translation: MLTAVCGSLGNQSSDAPRASPTHLDLQPLQPFQPHGSAAAGADFASPLPPPELPLAGPDAAFAAPGAYEPHGPPRLELPPDGPAAPGSYAKLLQAAPDMAHPYEPWFRPPHPGPPGEEGGVNWWDLHAGASWMELPHGQGGLQVPAPPGLQPPLGGYGGGEPQLCAPPAHLLPPAQHLLGPEGAKALEGPPEAEXGGGRAKGGRRAVPRGGGQAACRCPNCQEAERXGGPCPDGAKRKHLHNCHIPGCGKAYAKTSHLKAHLRWHSGDRPFVCNWLFCGKRFTRSDELQRHLQTHTGTKKFTCPVCGRVFMRSDHLGKHMKTHDGAKDGGEPEAKGAGEPPAAKGGKREPEGGNAAPTN
SIO_010081: SP6
subclass of: SO_0000673
so part of: SP6
location: 572574..573649
location: region:572574-573649:1
so has part: feature:572574-573649:1:exon

XP_032058560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:572574-573649:1:exon

SCRN2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: SCRN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 576436..578950
location: region:576436-578950:1
so has part: feature:576436-578950:1:exon
subclass of: SO_0000010

116498405
type: Gene
SIO_000068: ncbigene

position:576436:1
position: 576436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578950:1
position: 578950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576436-578950:1:exon

SCRN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SCRN2
product: secernin 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032202666.1
SIO_010081: SCRN2
subclass of: SO_0000673
so part of: SCRN2
location: join(576436..576460,576742..576913,576997..577178,577252..577451,577580..577795,577948..578113,578210..578387,578478..578950)
location: region:576436-578950:1
so has part: feature:576436-576460:1:exon
so has part: feature:576742-576913:1:exon
so has part: feature:576997-577178:1:exon
so has part: feature:577252-577451:1:exon
so has part: feature:577580-577795:1:exon
so has part: feature:577948-578113:1:exon
so has part: feature:578210-578387:1:exon
so has part: feature:578478-578950:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:576436-576460:1:exon

position:576460:1
position: 576460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:576742-576913:1:exon

position:576742:1
position: 576742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576913:1
position: 576913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:576997-577178:1:exon

position:576997:1
position: 576997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577178:1
position: 577178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:577252-577451:1:exon

position:577252:1
position: 577252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577451:1
position: 577451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:577580-577795:1:exon

position:577580:1
position: 577580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577795:1
position: 577795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:577948-578113:1:exon

position:577948:1
position: 577948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578113:1
position: 578113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:578210-578387:1:exon

position:578210:1
position: 578210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578387:1
position: 578387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:578478-578950:1:exon

position:578478:1
position: 578478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SCRN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SCRN2
product: secernin 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032202668.1
SIO_010081: SCRN2
subclass of: SO_0000673
so part of: SCRN2
location: join(576436..576460,576742..576913,576997..577178,577252..577451,577580..577795,577948..578113,578210..578387,578478..578647,578747..578950)
location: region:576436-578950:1
so has part: feature:576436-576460:1:exon
so has part: feature:576742-576913:1:exon
so has part: feature:576997-577178:1:exon
so has part: feature:577252-577451:1:exon
so has part: feature:577580-577795:1:exon
so has part: feature:577948-578113:1:exon
so has part: feature:578210-578387:1:exon
so has part: feature:578478-578647:1:exon
so has part: feature:578747-578950:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:576436-576460:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:576742-576913:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:576997-577178:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577252-577451:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:577580-577795:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:577948-578113:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:578210-578387:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:578478-578647:1:exon

position:578647:1
position: 578647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:578747-578950:1:exon

position:578747:1
position: 578747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SCRN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SCRN2
product: secernin 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202667.1
SIO_010081: SCRN2
subclass of: SO_0000673
so part of: SCRN2
location: join(576681..576913,576997..577178,577252..577451,577580..577795,577948..578113,578210..578387,578478..578950)
location: region:576681-578950:1
so has part: feature:576681-576913:1:exon
so has part: feature:576997-577178:1:exon
so has part: feature:577252-577451:1:exon
so has part: feature:577580-577795:1:exon
so has part: feature:577948-578113:1:exon
so has part: feature:578210-578387:1:exon
so has part: feature:578478-578950:1:exon

position:576681:1
position: 576681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576681-576913:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:576997-577178:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577252-577451:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577580-577795:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:577948-578113:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:578210-578387:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:578478-578950:1:exon

SCRN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SCRN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secernin-2
translation: MAGQGPAPSSCDCFVALPPHTAAPAVIFGKNADRPRHEVQEIVYVPAATHRPGDRVQCTYLEIEQAHRTHAVVLSRPAWLWGAEMGANEHGVCVGNEGVWTREPVGEDEALLGMDLVRLGLERGSSAREALEVITALLERHGQGGSCKEEPVPFVYHNTFLLADRTEAWVLETAGRYWAAQRIREGSRNISNQLSVGTDITAEHAELRQRARSQGWWSGAGEFSFADAFSLEQQPPRMEAAKARYRAGKELLRQHTGHITAETFMAILRDKASGICVDSEGFRTAGSMVSVLPRDPAVPCVHFFTATPDPSRSVFKPFVFVAGLKPAPQVLSPSFSDDPARKVPRFQSTVDRRHELYRRHQAALELMERDQEQGQKLQQTLRDLERQGLEAVNALLGGDVAPRPEELAELFFDCVDAEMKFYK
SIO_010081: SCRN2
subclass of: SO_0000673
so part of: SCRN2
location: join(576743..576913,576997..577178,577252..577451,577580..577795,577948..578113,578210..578387,578478..578636)
location: region:576743-578636:1
so has part: feature:576743-576913:1:exon
so has part: feature:576997-577178:1:exon
so has part: feature:577252-577451:1:exon
so has part: feature:577580-577795:1:exon
so has part: feature:577948-578113:1:exon
so has part: feature:578210-578387:1:exon
so has part: feature:578478-578636:1:exon

XP_032058557.1
type: Protein
SIO_000068: ncbiprotein

position:576743:1
position: 576743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578636:1
position: 578636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576743-576913:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:576997-577178:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577252-577451:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577580-577795:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:577948-578113:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:578210-578387:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:578478-578636:1:exon

SCRN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SCRN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secernin-2
translation: MAGQGPAPSSCDCFVALPPHTAAPAVIFGKNADRPRHEVQEIVYVPAATHRPGDRVQCTYLEIEQAHRTHAVVLSRPAWLWGAEMGANEHGVCVGNEGVWTREPVGEDEALLGMDLVRLGLERGSSAREALEVITALLERHGQGGSCKEEPVPFVYHNTFLLADRTEAWVLETAGRYWAAQRIREGSRNISNQLSVGTDITAEHAELRQRARSQGWWSGAGEFSFADAFSLEQQPPRMEAAKARYRAGKELLRQHTGHITAETFMAILRDKASGICVDSEGFRTAGSMVSVLPRDPAVPCVHFFTATPDPSRSVFKPFVFVAGLKPAPQVLSPSFSDDPARKVPRFQSTVDRRHELYRRHQAALELMERDQEQGQKLQQTLRDLERQGLEAVNALLGGDVAPRPEELAELFFDCVDAEMKFYK
SIO_010081: SCRN2
subclass of: SO_0000673
so part of: SCRN2
location: join(576743..576913,576997..577178,577252..577451,577580..577795,577948..578113,578210..578387,578478..578636)
location: region:576743-578636:1
so has part: feature:576743-576913:1:exon
so has part: feature:576997-577178:1:exon
so has part: feature:577252-577451:1:exon
so has part: feature:577580-577795:1:exon
so has part: feature:577948-578113:1:exon
so has part: feature:578210-578387:1:exon
so has part: feature:578478-578636:1:exon

XP_032058558.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:576743-576913:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:576997-577178:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577252-577451:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577580-577795:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:577948-578113:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:578210-578387:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:578478-578636:1:exon

SCRN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SCRN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secernin-2
translation: MAGQGPAPSSCDCFVALPPHTAAPAVIFGKNADRPRHEVQEIVYVPAATHRPGDRVQCTYLEIEQAHRTHAVVLSRPAWLWGAEMGANEHGVCVGNEGVWTREPVGEDEALLGMDLVRLGLERGSSAREALEVITALLERHGQGGSCKEEPVPFVYHNTFLLADRTEAWVLETAGRYWAAQRIREGSRNISNQLSVGTDITAEHAELRQRARSQGWWSGAGEFSFADAFSLEQQPPRMEAAKARYRAGKELLRQHTGHITAETFMAILRDKASGICVDSEGFRTAGSMVSVLPRDPAVPCVHFFTATPDPSRSVFKPFVFVAGLKPAPQVLSPSFSDDPARKVPRFQSTVDRRHELYRRHQAALELMERDQEQGQKLQQTLRDLERQGLEAVNALLGGDVAPRPEELAELFFDCVDAEMKFYK
SIO_010081: SCRN2
subclass of: SO_0000673
so part of: SCRN2
location: join(576743..576913,576997..577178,577252..577451,577580..577795,577948..578113,578210..578387,578478..578636)
location: region:576743-578636:1
so has part: feature:576743-576913:1:exon
so has part: feature:576997-577178:1:exon
so has part: feature:577252-577451:1:exon
so has part: feature:577580-577795:1:exon
so has part: feature:577948-578113:1:exon
so has part: feature:578210-578387:1:exon
so has part: feature:578478-578636:1:exon

XP_032058559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:576743-576913:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:576997-577178:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577252-577451:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577580-577795:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:577948-578113:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:578210-578387:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:578478-578636:1:exon

MRPL10
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: MRPL10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 581140..583273
location: region:581140-583273:1
so has part: feature:581140-583273:1:exon
subclass of: SO_0000010

116498407
type: Gene
SIO_000068: ncbigene

position:581140:1
position: 581140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583273:1
position: 583273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581140-583273:1:exon

MRPL10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: MRPL10
product: mitochondrial ribosomal protein L10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202670.1
SIO_010081: MRPL10
subclass of: SO_0000673
so part of: MRPL10
location: join(581140..581196,581540..581709,581929..582093,582177..582321,582645..583273)
location: region:581140-583273:1
so has part: feature:581140-581196:1:exon
so has part: feature:581540-581709:1:exon
so has part: feature:581929-582093:1:exon
so has part: feature:582177-582321:1:exon
so has part: feature:582645-583273:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:581140-581196:1:exon

position:581196:1
position: 581196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:581540-581709:1:exon

position:581540:1
position: 581540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:581709:1
position: 581709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:581929-582093:1:exon

position:581929:1
position: 581929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:582093:1
position: 582093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:582177-582321:1:exon

position:582177:1
position: 582177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:582321:1
position: 582321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:582645-583273:1:exon

position:582645:1
position: 582645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRPL10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: MRPL10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L10, mitochondrial
translation: MAALSGGAPWRTGWLPALRLARRSSKAVTRHWKAVHLQRQKLMALTEYLPPRPPVPERCLRPPQQPRQEDNGYARLLRRQVEEVFRDSRMVAVCQYNSMPGEDVVLMRHYLRKHNIEVKFVLNEIVRPVLSQSRYRNLLPLFVGRNILLVSPETKAKEMLRVLKGVPQVNLLGACIDDTILSRQGVENFAKLPSLEASQGQTLGALTLLPSQTCSLLQHGAAHLTALLDQHIHQLRDGAGQGGTPKGPEPPQSPGTP
SIO_010081: MRPL10
subclass of: SO_0000673
so part of: MRPL10
location: join(581160..581196,581540..581709,581929..582093,582177..582321,582645..582901)
location: region:581160-582901:1
so has part: feature:581160-581196:1:exon
so has part: feature:581540-581709:1:exon
so has part: feature:581929-582093:1:exon
so has part: feature:582177-582321:1:exon
so has part: feature:582645-582901:1:exon

XP_032058561.1
type: Protein
SIO_000068: ncbiprotein

position:581160:1
position: 581160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:582901:1
position: 582901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581160-581196:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:581540-581709:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581929-582093:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:582177-582321:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:582645-582901:1:exon

OSBPL7
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: OSBPL7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 584408..589945
location: region:584408-589945:1
so has part: feature:584408-589945:1:exon
subclass of: SO_0000010

116498409
type: Gene
SIO_000068: ncbigene

position:584408:1
position: 584408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589945:1
position: 589945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584408-589945:1:exon

OSBPL7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: OSBPL7
product: oxysterol binding protein like 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032202671.1
SIO_010081: OSBPL7
subclass of: SO_0000673
so part of: OSBPL7
location: join(584408..584548,584648..584770,584894..584947,585067..585180,585265..585390,585467..585587,585668..585771,585844..585936,586019..586142,586232..586356,586552..586659,586738..586869,587303..587393,587476..587753,587846..587983,588065..588128,588198..588276,588359..588503,589044..589185,589349..589475,589571..589693,589809..589945)
location: region:584408-589945:1
so has part: feature:584408-584548:1:exon
so has part: feature:584648-584770:1:exon
so has part: feature:584894-584947:1:exon
so has part: feature:585067-585180:1:exon
so has part: feature:585265-585390:1:exon
so has part: feature:585467-585587:1:exon
so has part: feature:585668-585771:1:exon
so has part: feature:585844-585936:1:exon
so has part: feature:586019-586142:1:exon
so has part: feature:586232-586356:1:exon
so has part: feature:586552-586659:1:exon
so has part: feature:586738-586869:1:exon
so has part: feature:587303-587393:1:exon
so has part: feature:587476-587753:1:exon
so has part: feature:587846-587983:1:exon
so has part: feature:588065-588128:1:exon
so has part: feature:588198-588276:1:exon
so has part: feature:588359-588503:1:exon
so has part: feature:589044-589185:1:exon
so has part: feature:589349-589475:1:exon
so has part: feature:589571-589693:1:exon
so has part: feature:589809-589945:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:584408-584548:1:exon

position:584548:1
position: 584548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:584648-584770:1:exon

position:584648:1
position: 584648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584770:1
position: 584770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:584894-584947:1:exon

position:584894:1
position: 584894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584947:1
position: 584947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:585067-585180:1:exon

position:585067:1
position: 585067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585180:1
position: 585180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:585265-585390:1:exon

position:585265:1
position: 585265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585390:1
position: 585390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:585467-585587:1:exon

position:585467:1
position: 585467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585587:1
position: 585587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:585668-585771:1:exon

position:585668:1
position: 585668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585771:1
position: 585771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:585844-585936:1:exon

position:585844:1
position: 585844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585936:1
position: 585936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:586019-586142:1:exon

position:586019:1
position: 586019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586142:1
position: 586142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:586232-586356:1:exon

position:586232:1
position: 586232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586356:1
position: 586356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:586552-586659:1:exon

position:586552:1
position: 586552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586659:1
position: 586659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:586738-586869:1:exon

position:586738:1
position: 586738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586869:1
position: 586869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:587303-587393:1:exon

position:587303:1
position: 587303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587393:1
position: 587393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:587476-587753:1:exon

position:587476:1
position: 587476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587753:1
position: 587753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:587846-587983:1:exon

position:587846:1
position: 587846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587983:1
position: 587983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:588065-588128:1:exon

position:588065:1
position: 588065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588128:1
position: 588128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:588198-588276:1:exon

position:588198:1
position: 588198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588276:1
position: 588276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:588359-588503:1:exon

position:588359:1
position: 588359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588503:1
position: 588503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:589044-589185:1:exon

position:589044:1
position: 589044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589185:1
position: 589185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:589349-589475:1:exon

position:589349:1
position: 589349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589475:1
position: 589475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:589571-589693:1:exon

position:589571:1
position: 589571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589693:1
position: 589693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:589809-589945:1:exon

position:589809:1
position: 589809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OSBPL7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: OSBPL7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxysterol-binding protein-related protein 7
translation: MGSHEKDPASPRRAPSRSNSTVSSKHSSVQQGSESWEVVEEPRGRGSPSREPPRQEGFLLKKRKWPLKGWHKRYFVLENGILTYATTRQDVLKGKLHGAIDVRQSVMSVNKKAQRVDLDTEDNIYHLKIKSPELFASWVSSLCSHHQGERPDPLACPSGGPAGTTPAAAQGPWTRILPSGSAPALSALASSRDKVDAWLKDSEGLERCSAELSACQEQLRELTGMLQSLESLHRIPSAPLISSGQPSAAAERPKKGRRSTRIWCTQSFAKDDSIGRVGRLHGSVPNLSRYLEPGQLPFSLPPEYSQLQRSFWLLAQKVHGSLSSVVTALTAERARLEEMRQALDRRRSAPRPGSAGPTGAALPSLEARDGLRRFHSLSVSSDTTLDSFASLHPDEPDALPAKGREQQRSQRSIASLADSHTEFFDACEVFLSASSSENEASDDESCISEATNSICEDLAEPGGPGHPQTGADGPGGVVEPPPLELPGPGPQRRSRLPAPPAPPGDVSLWGLLRSSVGKDLSRVALPVQLNEPLNTLQRLCEELEYSALLDRAARARDPRQRLVLVAAFAVSAYASTFYRAGSKPFNPVLGETYECVRPDRGFRFISEQVCHHPPISACHAESDNFVFWQDMRWKNKFWGKSLEIVPMGTVNVQLPRSGDHFEWNKVTTCIHNVLSGPRWIERYGEVLIRNTRDASYHCKLTFCKARYWGAGANEVQGAVLSRSGTVVERLAGKWHEGLYRGAPPGHCVWRANPMPHDHERNYGFTQFALELNELTPELRRVLPSTDTRLRPDQRYLEEGNVPAAETQKRQIEQLQRDRRRVMEENNITHQARFFRRLTDANGKESWVTNNTYWKLRLDPGFAHLDSAVLW
SIO_010081: OSBPL7
subclass of: SO_0000673
so part of: OSBPL7
location: join(584456..584548,584648..584770,584894..584947,585067..585180,585265..585390,585467..585587,585668..585771,585844..585936,586019..586142,586232..586356,586552..586659,586738..586869,587303..587393,587476..587753,587846..587983,588065..588128,588198..588276,588359..588503,589044..589185,589349..589475,589571..589693,589809..589917)
location: region:584456-589917:1
so has part: feature:584456-584548:1:exon
so has part: feature:584648-584770:1:exon
so has part: feature:584894-584947:1:exon
so has part: feature:585067-585180:1:exon
so has part: feature:585265-585390:1:exon
so has part: feature:585467-585587:1:exon
so has part: feature:585668-585771:1:exon
so has part: feature:585844-585936:1:exon
so has part: feature:586019-586142:1:exon
so has part: feature:586232-586356:1:exon
so has part: feature:586552-586659:1:exon
so has part: feature:586738-586869:1:exon
so has part: feature:587303-587393:1:exon
so has part: feature:587476-587753:1:exon
so has part: feature:587846-587983:1:exon
so has part: feature:588065-588128:1:exon
so has part: feature:588198-588276:1:exon
so has part: feature:588359-588503:1:exon
so has part: feature:589044-589185:1:exon
so has part: feature:589349-589475:1:exon
so has part: feature:589571-589693:1:exon
so has part: feature:589809-589917:1:exon

XP_032058562.1
type: Protein
SIO_000068: ncbiprotein

position:584456:1
position: 584456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589917:1
position: 589917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584456-584548:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:584648-584770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:584894-584947:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:585067-585180:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:585265-585390:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:585467-585587:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:585668-585771:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:585844-585936:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586019-586142:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:586232-586356:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:586552-586659:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:586738-586869:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:587303-587393:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:587476-587753:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:587846-587983:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:588065-588128:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:588198-588276:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:588359-588503:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:589044-589185:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:589349-589475:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:589571-589693:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:589809-589917:1:exon

TBX21
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TBX21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(590038..598511)
location: region:590038-598511:-1
so has part: feature:590038-598511:-1:exon
subclass of: SO_0000010

116498255
type: Gene
SIO_000068: ncbigene

position:590038:-1
position: 590038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598511:-1
position: 598511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590038-598511:-1:exon

TBX21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: TBX21
product: T-box transcription factor 21
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_032202501.1
SIO_010081: TBX21
subclass of: SO_0000673
so part of: TBX21
location: complement(join(590038..590047,590738..591446,591543..591604,592060..592218,592308..592429,592527..592681,598006..598511))
location: region:590038-598511:-1
so has part: feature:598006-598511:-1:exon
so has part: feature:592527-592681:-1:exon
so has part: feature:592308-592429:-1:exon
so has part: feature:592060-592218:-1:exon
so has part: feature:591543-591604:-1:exon
so has part: feature:590738-591446:-1:exon
so has part: feature:590038-590047:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:598006-598511:-1:exon

position:598006:-1
position: 598006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:592527-592681:-1:exon

position:592527:-1
position: 592527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592681:-1
position: 592681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:592308-592429:-1:exon

position:592308:-1
position: 592308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592429:-1
position: 592429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:592060-592218:-1:exon

position:592060:-1
position: 592060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592218:-1
position: 592218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:591543-591604:-1:exon

position:591543:-1
position: 591543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591604:-1
position: 591604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:590738-591446:-1:exon

position:590738:-1
position: 590738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591446:-1
position: 591446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:590038-590047:-1:exon

position:590047:-1
position: 590047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TBX21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: TBX21
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: T-box transcription factor TBX21
translation: MGALEPAAGAPRAALPMLSGAASFAKEPPGARDAAAAAYYGEPGATEPPVPPLPYAAPPVPGGYGGGGGRFLGPCPPYRAPPPAAAPGAGSGYAAAAAGEGYGGAELYGGAEGAYGPGGAPPLCPRAGPLCALPGYRAAGKVQVMLNNFPLWAKFHKHQTEMIITKQGRRMFPFLSFNLSGLNPVAHYSVCVDVVLVDQHHWRYQGGKWVQCGKAEGNMPGNRLYLHPDSPNTGAHWMRQEVSFGKLKLTNNKGAANNVGQMIVLQSLHKYQPRLHVTEVKEGEGEAPCPSPHTHTFAFPETQFIAVTAYQNADITQLKIDHNPFAKGFRDNFDSMYAASEGDRLTPSPPDAPGCPQLLPGPRLQPFLQEQYPLPPGRFYNGERGPPLPLPPKDPPRWYFAPQQPPAGALEFGGYEGGFGGGKLVPYGVKPFALPPATHPPLPYYPEGPAAFGGPGAWGPGQYVPKGSPGTLGWYREPREEKGKEAEGWTPEPPPIKPGEATEPGLYEGGCKRRRVSPYPSSAESSPPPATGTSTTRSRAPTVATTASTGTEPGGGARRPPPPTHQAPQQTFA
SIO_010081: TBX21
subclass of: SO_0000673
so part of: TBX21
location: complement(join(590038..590047,590738..591446,591543..591604,592060..592218,592308..592429,592527..592681,598006..598511))
location: region:590038-598511:-1
so has part: feature:598006-598511:-1:exon
so has part: feature:592527-592681:-1:exon
so has part: feature:592308-592429:-1:exon
so has part: feature:592060-592218:-1:exon
so has part: feature:591543-591604:-1:exon
so has part: feature:590738-591446:-1:exon
so has part: feature:590038-590047:-1:exon

XP_032058392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:598006-598511:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:592527-592681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:592308-592429:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:592060-592218:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:591543-591604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:590738-591446:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:590038-590047:-1:exon

TBKBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TBKBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(609202..618962)
location: region:609202-618962:-1
so has part: feature:609202-618962:-1:exon
subclass of: SO_0000010

116498403
type: Gene
SIO_000068: ncbigene

position:609202:-1
position: 609202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618962:-1
position: 618962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609202-618962:-1:exon

TBKBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: TBKBP1
product: TBK1 binding protein 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032202664.1
SIO_010081: TBKBP1
subclass of: SO_0000673
so part of: TBKBP1
location: complement(join(609202..610131,610351..611091,611316..611434,616056..616105,616182..616360,616460..616613,616878..616982,617058..617180,617280..617516,618927..618962))
location: region:609202-618962:-1
so has part: feature:618927-618962:-1:exon
so has part: feature:617280-617516:-1:exon
so has part: feature:617058-617180:-1:exon
so has part: feature:616878-616982:-1:exon
so has part: feature:616460-616613:-1:exon
so has part: feature:616182-616360:-1:exon
so has part: feature:616056-616105:-1:exon
so has part: feature:611316-611434:-1:exon
so has part: feature:610351-611091:-1:exon
so has part: feature:609202-610131:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:618927-618962:-1:exon

position:618927:-1
position: 618927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:617280-617516:-1:exon

position:617280:-1
position: 617280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617516:-1
position: 617516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:617058-617180:-1:exon

position:617058:-1
position: 617058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617180:-1
position: 617180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:616878-616982:-1:exon

position:616878:-1
position: 616878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616982:-1
position: 616982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:616460-616613:-1:exon

position:616460:-1
position: 616460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616613:-1
position: 616613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:616182-616360:-1:exon

position:616182:-1
position: 616182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616360:-1
position: 616360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:616056-616105:-1:exon

position:616056:-1
position: 616056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616105:-1
position: 616105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:611316-611434:-1:exon

position:611316:-1
position: 611316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611434:-1
position: 611434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:610351-611091:-1:exon

position:610351:-1
position: 610351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611091:-1
position: 611091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:609202-610131:-1:exon

position:610131:-1
position: 610131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TBKBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: TBKBP1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: TANK-binding kinase 1-binding protein 1
translation: MDSMFEDDISILTQEALGPDEDWLDSPNTDLSGEMCSASHFALITAYDDIKNRLTGLERENSTLKRRLKMYEVKYPLIGEFGEEHIFSVYEAKETSLLKSEKASLQQQLNQFQHELQKSKEREEQLDEMIQAYEKLCVEKADLESELGEMRALVETHLSRIRSLEQQLRQRDGGAFPGLGAPLPGQEVPFLSLHPNPALSHVLDRPAGWPSRGMEAAGRLEAELEAARQEAQRAQHREEHLKAECERLQAELKHLQDTRQQEQSERDMAWVKKMGDDQVNLALAYTELTEELCRLRNLSSLQSQILRTLLQEKSLNGGQRHSPLSQCHSPAQQRRSPAPQCPSPAPGRPPAPQCQSPALQRRSPAPQCQSPAQQRRSPAPGPCQSPAQQRRSPVPTSSPSPAQQRRSPAPPPCPXPRPRRPPHRLPGERMELGYAKPSSRHIKAGFQGRRSYSEVSNVALYQQSRSLWLQPEASTLPKHRPYGEVYLGGTGAPLSAREPFEEHVRFEKQSSDEEDWAVPSPPSPEVGAVRCASFCAGFPIPDTAAHRAAAAYARSEHAQSWPSINLLMETVDSEIRSCPLCQLAFPIGYPDDALIKHIDSHLENSKI
SIO_010081: TBKBP1
subclass of: SO_0000673
so part of: TBKBP1
location: complement(join(610003..610131,610351..611091,611316..611434,616056..616105,616182..616360,616460..616613,616878..616982,617058..617180,617280..617501))
location: region:610003-617501:-1
so has part: feature:617280-617501:-1:exon
so has part: feature:617058-617180:-1:exon
so has part: feature:616878-616982:-1:exon
so has part: feature:616460-616613:-1:exon
so has part: feature:616182-616360:-1:exon
so has part: feature:616056-616105:-1:exon
so has part: feature:611316-611434:-1:exon
so has part: feature:610351-611091:-1:exon
so has part: feature:610003-610131:-1:exon

XP_032058555.1
type: Protein
SIO_000068: ncbiprotein

position:610003:-1
position: 610003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617501:-1
position: 617501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:617280-617501:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:617058-617180:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:616878-616982:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:616460-616613:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:616182-616360:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:616056-616105:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:611316-611434:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:610351-611091:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:610003-610131:-1:exon

KPNB1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: KPNB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(625303..646982)
location: region:625303-646982:-1
so has part: feature:625303-646982:-1:exon
subclass of: SO_0000010

116498401
type: Gene
SIO_000068: ncbigene

position:625303:-1
position: 625303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:646982:-1
position: 646982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625303-646982:-1:exon

KPNB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: KPNB1
product: karyopherin subunit beta 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202661.1
SIO_010081: KPNB1
subclass of: SO_0000673
so part of: KPNB1
location: complement(join(625303..626143,626694..626855,627470..627584,627923..628028,628137..628280,628538..628645,629252..629334,630401..630545,632821..632892,633166..633313,634501..634631,635860..636051,636274..636498,637611..637712,638938..639048,639250..639339,639711..639770,640855..641007,642906..643106,644726..644908,646564..646622,646901..646982))
location: region:625303-646982:-1
so has part: feature:646901-646982:-1:exon
so has part: feature:646564-646622:-1:exon
so has part: feature:644726-644908:-1:exon
so has part: feature:642906-643106:-1:exon
so has part: feature:640855-641007:-1:exon
so has part: feature:639711-639770:-1:exon
so has part: feature:639250-639339:-1:exon
so has part: feature:638938-639048:-1:exon
so has part: feature:637611-637712:-1:exon
so has part: feature:636274-636498:-1:exon
so has part: feature:635860-636051:-1:exon
so has part: feature:634501-634631:-1:exon
so has part: feature:633166-633313:-1:exon
so has part: feature:632821-632892:-1:exon
so has part: feature:630401-630545:-1:exon
so has part: feature:629252-629334:-1:exon
so has part: feature:628538-628645:-1:exon
so has part: feature:628137-628280:-1:exon
so has part: feature:627923-628028:-1:exon
so has part: feature:627470-627584:-1:exon
so has part: feature:626694-626855:-1:exon
so has part: feature:625303-626143:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:646901-646982:-1:exon

position:646901:-1
position: 646901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:646564-646622:-1:exon

position:646564:-1
position: 646564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:646622:-1
position: 646622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:644726-644908:-1:exon

position:644726:-1
position: 644726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644908:-1
position: 644908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:642906-643106:-1:exon

position:642906:-1
position: 642906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643106:-1
position: 643106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:640855-641007:-1:exon

position:640855:-1
position: 640855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641007:-1
position: 641007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:639711-639770:-1:exon

position:639711:-1
position: 639711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639770:-1
position: 639770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:639250-639339:-1:exon

position:639250:-1
position: 639250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639339:-1
position: 639339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:638938-639048:-1:exon

position:638938:-1
position: 638938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639048:-1
position: 639048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:637611-637712:-1:exon

position:637611:-1
position: 637611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637712:-1
position: 637712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:636274-636498:-1:exon

position:636274:-1
position: 636274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636498:-1
position: 636498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:635860-636051:-1:exon

position:635860:-1
position: 635860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636051:-1
position: 636051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:634501-634631:-1:exon

position:634501:-1
position: 634501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634631:-1
position: 634631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:633166-633313:-1:exon

position:633166:-1
position: 633166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633313:-1
position: 633313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:632821-632892:-1:exon

position:632821:-1
position: 632821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632892:-1
position: 632892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:630401-630545:-1:exon

position:630401:-1
position: 630401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630545:-1
position: 630545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:629252-629334:-1:exon

position:629252:-1
position: 629252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629334:-1
position: 629334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:628538-628645:-1:exon

position:628538:-1
position: 628538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628645:-1
position: 628645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:628137-628280:-1:exon

position:628137:-1
position: 628137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628280:-1
position: 628280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:627923-628028:-1:exon

position:627923:-1
position: 627923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628028:-1
position: 628028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:627470-627584:-1:exon

position:627470:-1
position: 627470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:627584:-1
position: 627584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:626694-626855:-1:exon

position:626694:-1
position: 626694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626855:-1
position: 626855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:625303-626143:-1:exon

position:626143:-1
position: 626143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KPNB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: KPNB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: importin subunit beta-1
translation: MELITILEKTVSPDRSELEAAQKFLEQAAIENLPTFLVELSRVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSSASQCVAGIACAEIPMSQWPELIPQLVANVTNQHSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPNQLKPLVIQAMPTLIELMKDPSVVVRDTTAWTVGRICEMLPEAAINDIYLAPLLQCLIEGLSAEPRVASNVCWAFTSLAEAAYEAADVADDQEEPATYCLSSSFELIVQKLLETTDRPDGHQNNLRSSAYEALMEIVKNSAKDCYPAVQKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKVQHQDALQISDVVMASLLRMFQSTAGSGGVQEDALMAVSTLVEVLGGEFLKYMDAFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQSNILPFCDEVMQLLLENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLDVVLNTLQQASQAQVDKSDYDMVDYLNELREGCLEAYTGIIQGLKGDQENVHPDVMLVQPRVEFILSYIDHIAGDEDHTDGVVACAAGLIGDLCTAFGKDVLKLVEARPMIHELLTEGRRSKTNKTKTLATWATKELRKLKNQA
SIO_010081: KPNB1
subclass of: SO_0000673
so part of: KPNB1
location: complement(join(626143,626694..626855,627470..627584,627923..628028,628137..628280,628538..628645,629252..629334,630401..630545,632821..632892,633166..633313,634501..634631,635860..636051,636274..636498,637611..637712,638938..639048,639250..639339,639711..639770,640855..641007,642906..643106,644726..644908,646564..646622,646901..646940))
location: region:626143-646940:-1
so has part: feature:646901-646940:-1:exon
so has part: feature:646564-646622:-1:exon
so has part: feature:644726-644908:-1:exon
so has part: feature:642906-643106:-1:exon
so has part: feature:640855-641007:-1:exon
so has part: feature:639711-639770:-1:exon
so has part: feature:639250-639339:-1:exon
so has part: feature:638938-639048:-1:exon
so has part: feature:637611-637712:-1:exon
so has part: feature:636274-636498:-1:exon
so has part: feature:635860-636051:-1:exon
so has part: feature:634501-634631:-1:exon
so has part: feature:633166-633313:-1:exon
so has part: feature:632821-632892:-1:exon
so has part: feature:630401-630545:-1:exon
so has part: feature:629252-629334:-1:exon
so has part: feature:628538-628645:-1:exon
so has part: feature:628137-628280:-1:exon
so has part: feature:627923-628028:-1:exon
so has part: feature:627470-627584:-1:exon
so has part: feature:626694-626855:-1:exon
so has part: feature:626143-626143:-1:exon

XP_032058552.1
type: Protein
SIO_000068: ncbiprotein

position:646940:-1
position: 646940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:646901-646940:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:646564-646622:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:644726-644908:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:642906-643106:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:640855-641007:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:639711-639770:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:639250-639339:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:638938-639048:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:637611-637712:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:636274-636498:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:635860-636051:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:634501-634631:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:633166-633313:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:632821-632892:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:630401-630545:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:629252-629334:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:628538-628645:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:628137-628280:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:627923-628028:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:627470-627584:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:626694-626855:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:626143-626143:-1:exon

NPEPPS
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: NPEPPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(649722..684412)
location: region:649722-684412:-1
so has part: feature:649722-684412:-1:exon
subclass of: SO_0000010

116498402
type: Gene
SIO_000068: ncbigene

position:649722:-1
position: 649722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684412:-1
position: 684412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:649722-684412:-1:exon

NPEPPS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: NPEPPS
product: aminopeptidase puromycin sensitive
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202663.1
SIO_010081: NPEPPS
subclass of: SO_0000673
so part of: NPEPPS
location: complement(join(649722..651076,652899..652946,653051..653206,653480..653587,654077..654133,654720..654862,655457..655676,657058..657192,658746..658885,659294..659357,660078..660187,660991..661051,661424..661528,661919..662083,664372..664486,665920..665953,666059..666155,666622..666822,667742..667849,668761..668882,670197..670274,676139..676223,684242..684412))
location: region:649722-684412:-1
so has part: feature:684242-684412:-1:exon
so has part: feature:676139-676223:-1:exon
so has part: feature:670197-670274:-1:exon
so has part: feature:668761-668882:-1:exon
so has part: feature:667742-667849:-1:exon
so has part: feature:666622-666822:-1:exon
so has part: feature:666059-666155:-1:exon
so has part: feature:665920-665953:-1:exon
so has part: feature:664372-664486:-1:exon
so has part: feature:661919-662083:-1:exon
so has part: feature:661424-661528:-1:exon
so has part: feature:660991-661051:-1:exon
so has part: feature:660078-660187:-1:exon
so has part: feature:659294-659357:-1:exon
so has part: feature:658746-658885:-1:exon
so has part: feature:657058-657192:-1:exon
so has part: feature:655457-655676:-1:exon
so has part: feature:654720-654862:-1:exon
so has part: feature:654077-654133:-1:exon
so has part: feature:653480-653587:-1:exon
so has part: feature:653051-653206:-1:exon
so has part: feature:652899-652946:-1:exon
so has part: feature:649722-651076:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:684242-684412:-1:exon

position:684242:-1
position: 684242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:676139-676223:-1:exon

position:676139:-1
position: 676139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676223:-1
position: 676223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:670197-670274:-1:exon

position:670197:-1
position: 670197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670274:-1
position: 670274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:668761-668882:-1:exon

position:668761:-1
position: 668761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668882:-1
position: 668882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:667742-667849:-1:exon

position:667742:-1
position: 667742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667849:-1
position: 667849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:666622-666822:-1:exon

position:666622:-1
position: 666622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666822:-1
position: 666822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:666059-666155:-1:exon

position:666059:-1
position: 666059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666155:-1
position: 666155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:665920-665953:-1:exon

position:665920:-1
position: 665920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665953:-1
position: 665953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:664372-664486:-1:exon

position:664372:-1
position: 664372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664486:-1
position: 664486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:661919-662083:-1:exon

position:661919:-1
position: 661919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662083:-1
position: 662083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:661424-661528:-1:exon

position:661424:-1
position: 661424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661528:-1
position: 661528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:660991-661051:-1:exon

position:660991:-1
position: 660991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661051:-1
position: 661051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:660078-660187:-1:exon

position:660078:-1
position: 660078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660187:-1
position: 660187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:659294-659357:-1:exon

position:659294:-1
position: 659294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:659357:-1
position: 659357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:658746-658885:-1:exon

position:658746:-1
position: 658746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658885:-1
position: 658885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:657058-657192:-1:exon

position:657058:-1
position: 657058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:657192:-1
position: 657192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:655457-655676:-1:exon

position:655457:-1
position: 655457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:655676:-1
position: 655676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:654720-654862:-1:exon

position:654720:-1
position: 654720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654862:-1
position: 654862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:654077-654133:-1:exon

position:654077:-1
position: 654077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654133:-1
position: 654133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:653480-653587:-1:exon

position:653480:-1
position: 653480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653587:-1
position: 653587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:653051-653206:-1:exon

position:653051:-1
position: 653051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653206:-1
position: 653206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:652899-652946:-1:exon

position:652899:-1
position: 652899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:652946:-1
position: 652946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:649722-651076:-1:exon

position:651076:-1
position: 651076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NPEPPS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: NPEPPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: puromycin-sensitive aminopeptidase
translation: MPEKRPFERLPADVCPLNYGLCLKPDLIDFTFEGKLEAAVQVKHATNQIVMNCADIDIITASYAPEGDEEVHATGFNYQNEDEKVTLSFPSTLQKGTGTLKIDFVGELNDKMKGFYRSKYTTPTGDTRYAAVTQFEATDARRAFPCWDEPAIKATFDISLVVPKDRVALSNMNVIDRKPYPDDENLVEVKFARTPIMSTYLVAFVVGEYDFVETRSLDGVLVRVYTPVGKAEQGKFALEVAAKTLPFYKDYFNVPYPLPKIDLIAIADFAAGAMENWGLVTYRETALLIDPKNSCSSSRQWVALVVGHELAHQWFGNLVTMEWWTHLWLNEGFASWIEYLCVDHCFPEYDIWTQFVSADYTRAQELDALDNSHPIEVSVGHPSEVDEIFDAISYSKGASVIRMLHDYIGDEDFRKGMNLYLTKFLQKNAATEDLWESLEKASGKPIAAVMNTWTKQMGFPLIYVEAEQQEEDKVLKLVQKKFCASGPYTGEDFPMWMVPISICTSDDPTCAKMQILMDKPELTLVLKDVKPDQWVKLNLGTVGFYRTQYSPDMLENLIPAIKDLSLPPVDRLGLQNDLFSLARAGIISTVEVLKVMEAFVNEPNYTVWSDLSCNLEILSTLLSHTDFYEEIQVFVKDVFSPIGERLGWDPKPGEGHLDALLRGLVLGKLGKAGHKATLEEARRRFKDHVEGKQILSADLRSPVYVTILKHGDSTTLDTMLKLHKQADMQEEKNRIERVLGAISQPELIQKVLTFALSEEVRPQDTVSVIGGVAGGSKQGRKAAWKFVRDNWEELYNRYQGGFLISRLIKLTVDGFANDKMAAEVKAFFESHPAPSAERTVQQCCENILLNAAWLKRDAENIHQYFLQRKAPPAMV
SIO_010081: NPEPPS
subclass of: SO_0000673
so part of: NPEPPS
location: complement(join(650924..651076,652899..652946,653051..653206,653480..653587,654077..654133,654720..654862,655457..655676,657058..657192,658746..658885,659294..659357,660078..660187,660991..661051,661424..661528,661919..662083,664372..664486,665920..665953,666059..666155,666622..666822,667742..667849,668761..668882,670197..670274,676139..676223,684242..684364))
location: region:650924-684364:-1
so has part: feature:684242-684364:-1:exon
so has part: feature:676139-676223:-1:exon
so has part: feature:670197-670274:-1:exon
so has part: feature:668761-668882:-1:exon
so has part: feature:667742-667849:-1:exon
so has part: feature:666622-666822:-1:exon
so has part: feature:666059-666155:-1:exon
so has part: feature:665920-665953:-1:exon
so has part: feature:664372-664486:-1:exon
so has part: feature:661919-662083:-1:exon
so has part: feature:661424-661528:-1:exon
so has part: feature:660991-661051:-1:exon
so has part: feature:660078-660187:-1:exon
so has part: feature:659294-659357:-1:exon
so has part: feature:658746-658885:-1:exon
so has part: feature:657058-657192:-1:exon
so has part: feature:655457-655676:-1:exon
so has part: feature:654720-654862:-1:exon
so has part: feature:654077-654133:-1:exon
so has part: feature:653480-653587:-1:exon
so has part: feature:653051-653206:-1:exon
so has part: feature:652899-652946:-1:exon
so has part: feature:650924-651076:-1:exon

XP_032058554.1
type: Protein
SIO_000068: ncbiprotein

position:650924:-1
position: 650924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684364:-1
position: 684364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:684242-684364:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:676139-676223:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:670197-670274:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:668761-668882:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:667742-667849:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:666622-666822:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:666059-666155:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:665920-665953:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:664372-664486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:661919-662083:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:661424-661528:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:660991-661051:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:660078-660187:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:659294-659357:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:658746-658885:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:657058-657192:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:655457-655676:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:654720-654862:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:654077-654133:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:653480-653587:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:653051-653206:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:652899-652946:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:650924-651076:-1:exon

MRPL45
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: MRPL45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 688271..692317
location: region:688271-692317:1
so has part: feature:688271-692317:1:exon
subclass of: SO_0000010

116498421
type: Gene
SIO_000068: ncbigene

position:688271:1
position: 688271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:692317:1
position: 692317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:688271-692317:1:exon

MRPL45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: MRPL45
product: mitochondrial ribosomal protein L45
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032202687.1
SIO_010081: MRPL45
subclass of: SO_0000673
so part of: MRPL45
location: join(688271..688323,688502..688691,689125..689242,689619..689717,690287..690335,690574..690723,690804..690977,691885..692317)
location: region:688271-692317:1
so has part: feature:688271-688323:1:exon
so has part: feature:688502-688691:1:exon
so has part: feature:689125-689242:1:exon
so has part: feature:689619-689717:1:exon
so has part: feature:690287-690335:1:exon
so has part: feature:690574-690723:1:exon
so has part: feature:690804-690977:1:exon
so has part: feature:691885-692317:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:688271-688323:1:exon

position:688323:1
position: 688323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:688502-688691:1:exon

position:688502:1
position: 688502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:688691:1
position: 688691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:689125-689242:1:exon

position:689125:1
position: 689125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689242:1
position: 689242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:689619-689717:1:exon

position:689619:1
position: 689619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689717:1
position: 689717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:690287-690335:1:exon

position:690287:1
position: 690287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:690335:1
position: 690335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:690574-690723:1:exon

position:690574:1
position: 690574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:690723:1
position: 690723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:690804-690977:1:exon

position:690804:1
position: 690804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:690977:1
position: 690977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:691885-692317:1:exon

position:691885:1
position: 691885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRPL45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: MRPL45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L45, mitochondrial
translation: MAAALRAAGLGLLGRRASALRPPGAAPPCLAVPVRTKRRLFVPDWARELSPAEREGRLRAAARALPEDRLERAFFLACTADIIDPYVPPEGDARMSSLSKDGLRQRVEKLKQTAASQLALRKVKDHVPDFSTKTFPEKAQEIFIEAHNCLANFNKQKLHSLVTERCYPDMVRGNRYKTIRWSFVESLEPPRVVHIRCNSIVNPSNLYGQVTVRMHTRQTLAVYDRFGRLMYGGEQVPKDVLEYVVFERYLVNPYGTWRMHGKIVPEWAPPKDPIIKTVMIPGPALDSSQEVKEHKEETSEQVQRQQ
SIO_010081: MRPL45
subclass of: SO_0000673
so part of: MRPL45
location: join(688276..688323,688502..688691,689125..689242,689619..689717,690287..690335,690574..690723,690804..690977,691885..691977)
location: region:688276-691977:1
so has part: feature:688276-688323:1:exon
so has part: feature:688502-688691:1:exon
so has part: feature:689125-689242:1:exon
so has part: feature:689619-689717:1:exon
so has part: feature:690287-690335:1:exon
so has part: feature:690574-690723:1:exon
so has part: feature:690804-690977:1:exon
so has part: feature:691885-691977:1:exon

XP_032058578.1
type: Protein
SIO_000068: ncbiprotein

position:688276:1
position: 688276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:691977:1
position: 691977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:688276-688323:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688502-688691:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:689125-689242:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:689619-689717:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:690287-690335:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:690574-690723:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:690804-690977:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:691885-691977:1:exon

SOCS7
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: SOCS7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 705751..722420
location: region:705751-722420:1
so has part: feature:705751-722420:1:exon
subclass of: SO_0000010

116498256
type: Gene
SIO_000068: ncbigene

position:705751:1
position: 705751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722420:1
position: 722420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:705751-722420:1:exon

SOCS7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SOCS7
product: suppressor of cytokine signaling 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032202502.1
SIO_010081: SOCS7
subclass of: SO_0000673
so part of: SOCS7
location: join(705751..706078,706532..706727,710677..710741,713095..713199,713919..714020,714829..714959,715365..715533,717342..717470,719921..720056,720346..720503,720775..722420)
location: region:705751-722420:1
so has part: feature:705751-706078:1:exon
so has part: feature:706532-706727:1:exon
so has part: feature:710677-710741:1:exon
so has part: feature:713095-713199:1:exon
so has part: feature:713919-714020:1:exon
so has part: feature:714829-714959:1:exon
so has part: feature:715365-715533:1:exon
so has part: feature:717342-717470:1:exon
so has part: feature:719921-720056:1:exon
so has part: feature:720346-720503:1:exon
so has part: feature:720775-722420:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:705751-706078:1:exon

position:706078:1
position: 706078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:706532-706727:1:exon

position:706532:1
position: 706532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706727:1
position: 706727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:710677-710741:1:exon

position:710677:1
position: 710677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710741:1
position: 710741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:713095-713199:1:exon

position:713095:1
position: 713095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:713199:1
position: 713199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:713919-714020:1:exon

position:713919:1
position: 713919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714020:1
position: 714020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:714829-714959:1:exon

position:714829:1
position: 714829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714959:1
position: 714959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:715365-715533:1:exon

position:715365:1
position: 715365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:715533:1
position: 715533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:717342-717470:1:exon

position:717342:1
position: 717342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717470:1
position: 717470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:719921-720056:1:exon

position:719921:1
position: 719921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720056:1
position: 720056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:720346-720503:1:exon

position:720346:1
position: 720346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720503:1
position: 720503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:720775-722420:1:exon

position:720775:1
position: 720775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SOCS7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SOCS7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of cytokine signaling 7
translation: MQRAELRDGEAAAAAAASYRVLSRLLGYGAAPEAGAVAAGGGGGGAVVTGGAGAGPTGPGGGRLPLPIPLPAAAAALPGGGALRGPRPPPQLMVFRNAAEGRPGEPEDGGCRKGSLRVRLRRLFRTKSCSGGSAAGDAAAAAAATGSRRAGDLPASAGSLTDVCGARGREQEAGRKHRLTRTQSAFSPVVFSPLFTGETVSLVDVDISQRGLTSPHPPTPPPPPRRSLSLLDDISGTLPTSVLVGPMGSSLQSFPLPPPPPPHAPDAFPRIVPLRPMETAPSQPTPHLQCPLYRPDSSSFAASLRELEKCGWYWGPMNWEDAEMKLKGKPDGSFLVRDSSDPRYILSLSFRSQGITHHTRMEHYRGTFSLWCHPKFEDRCQSVVEFIKRAIMHSKNGKFLYFLRSRVPGLPPTPVQLLYPVSRFSNVKSLQHLCRFRIRQLVRIDHIPELPLPKPLISYIRKFYYYDPQEEVYLSLKEAQLISKQKQEAESST
SIO_010081: SOCS7
subclass of: SO_0000673
so part of: SOCS7
location: join(705751..706078,706532..706727,710677..710741,713095..713199,713919..714020,714829..714959,715365..715533,717342..717470,719921..720056,720346..720466)
location: region:705751-720466:1
so has part: feature:705751-706078:1:exon
so has part: feature:706532-706727:1:exon
so has part: feature:710677-710741:1:exon
so has part: feature:713095-713199:1:exon
so has part: feature:713919-714020:1:exon
so has part: feature:714829-714959:1:exon
so has part: feature:715365-715533:1:exon
so has part: feature:717342-717470:1:exon
so has part: feature:719921-720056:1:exon
so has part: feature:720346-720466:1:exon

XP_032058393.1
type: Protein
SIO_000068: ncbiprotein

position:720466:1
position: 720466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:705751-706078:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:706532-706727:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:710677-710741:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:713095-713199:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:713919-714020:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:714829-714959:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:715365-715533:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:717342-717470:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:719921-720056:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:720346-720466:1:exon

ARHGAP23
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: ARHGAP23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 725755..759135
location: region:725755-759135:1
so has part: feature:725755-759135:1:exon
subclass of: SO_0000010

116498520
type: Gene
SIO_000068: ncbigene

position:725755:1
position: 725755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759135:1
position: 759135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:725755-759135:1:exon

ARHGAP23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ARHGAP23
product: Rho GTPase activating protein 23, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032202832.1
SIO_010081: ARHGAP23
subclass of: SO_0000673
so part of: ARHGAP23
location: join(725755..725803,744341..744520,746104..746128,747028..747120,747473..747551,747781..747835,748930..750340,750628..750783,750947..751058,751150..751207,751323..751460,751544..751843,753128..753189,753571..753698,753862..753980,754071..754226,754592..754670,754869..754942,755024..755113,755219..755344,755458..755499,755610..755703,757065..757096,757221..759135)
location: region:725755-759135:1
so has part: feature:725755-725803:1:exon
so has part: feature:744341-744520:1:exon
so has part: feature:746104-746128:1:exon
so has part: feature:747028-747120:1:exon
so has part: feature:747473-747551:1:exon
so has part: feature:747781-747835:1:exon
so has part: feature:748930-750340:1:exon
so has part: feature:750628-750783:1:exon
so has part: feature:750947-751058:1:exon
so has part: feature:751150-751207:1:exon
so has part: feature:751323-751460:1:exon
so has part: feature:751544-751843:1:exon
so has part: feature:753128-753189:1:exon
so has part: feature:753571-753698:1:exon
so has part: feature:753862-753980:1:exon
so has part: feature:754071-754226:1:exon
so has part: feature:754592-754670:1:exon
so has part: feature:754869-754942:1:exon
so has part: feature:755024-755113:1:exon
so has part: feature:755219-755344:1:exon
so has part: feature:755458-755499:1:exon
so has part: feature:755610-755703:1:exon
so has part: feature:757065-757096:1:exon
so has part: feature:757221-759135:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:725755-725803:1:exon

position:725803:1
position: 725803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:744341-744520:1:exon

position:744341:1
position: 744341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744520:1
position: 744520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:746104-746128:1:exon

position:746104:1
position: 746104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746128:1
position: 746128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:747028-747120:1:exon

position:747028:1
position: 747028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747120:1
position: 747120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:747473-747551:1:exon

position:747473:1
position: 747473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747551:1
position: 747551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:747781-747835:1:exon

position:747781:1
position: 747781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747835:1
position: 747835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:748930-750340:1:exon

position:748930:1
position: 748930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750340:1
position: 750340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:750628-750783:1:exon

position:750628:1
position: 750628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750783:1
position: 750783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:750947-751058:1:exon

position:750947:1
position: 750947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751058:1
position: 751058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:751150-751207:1:exon

position:751150:1
position: 751150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751207:1
position: 751207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:751323-751460:1:exon

position:751323:1
position: 751323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751460:1
position: 751460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:751544-751843:1:exon

position:751544:1
position: 751544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751843:1
position: 751843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:753128-753189:1:exon

position:753128:1
position: 753128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753189:1
position: 753189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:753571-753698:1:exon

position:753571:1
position: 753571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753698:1
position: 753698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:753862-753980:1:exon

position:753862:1
position: 753862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753980:1
position: 753980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:754071-754226:1:exon

position:754071:1
position: 754071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754226:1
position: 754226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:754592-754670:1:exon

position:754592:1
position: 754592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754670:1
position: 754670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:754869-754942:1:exon

position:754869:1
position: 754869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754942:1
position: 754942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:755024-755113:1:exon

position:755024:1
position: 755024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755113:1
position: 755113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:755219-755344:1:exon

position:755219:1
position: 755219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755344:1
position: 755344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:755458-755499:1:exon

position:755458:1
position: 755458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755499:1
position: 755499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:755610-755703:1:exon

position:755610:1
position: 755610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755703:1
position: 755703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:757065-757096:1:exon

position:757065:1
position: 757065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757096:1
position: 757096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:757221-759135:1:exon

position:757221:1
position: 757221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARHGAP23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: ARHGAP23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 23 isoform X2
translation: MEQPTPGRRDGASPNDNAPPEGPFPWGGPKTVVLRKSTQGGFGFTLRHFIVYPPESAVHSPAKEEENGNRAGPPRSRLEPMDTIFVKNVREDGPAHQAGLRTGDRLVKVNGESIIGKTYSQVIALIQNSDDVLELSIMPKDEDILQLAYSQDAYLKGNEPYSGGAQSIPEPPPLCYPRKTYPFQARGAEPPPGQPPDPRAHRPAGTRSEGGGSPAHRPEEPQPGGPPQRPAVPHGRPGSFSRSACPSSSASSLPERYGVPPAAPSCYGGGPKHPAEHRTHCGFKEGGGGPRVPGRQECQQALSRWFCSQEPRRSTSEERRYAMPPRYRSVSQDRLGGSATPRGWPHSASHDTLLQPAREGWAHRARSDHSLGRCGRSMEALEPGALLSPRLDRSAWPPERLCRATAAGPPGTHSSFAPPSSSSSSAAAAPREPAAPVQKHPSQPNLQSVDDSGYIGYRSYSPSFQRRTGLLHARSFRDPAFGGLPTFSITQRPAATAAPFPERATPVAPLPAGSTHPGPPLAPEAPQEQRMESSRVPEQHEERREEVVLRQKPPTGRKMPPPLRQMNFVFPDGVKETDICDPPAAGSRGERPAAERSGRRVAPLAAPEDSLASIPFIDEPTSPSIDLKAKHVPASSVVSSAMNSAPAVATSPSSPTFAFALSRHYSQDCSSIKAGRRSSYLLAITTERSKSCDDGLNTFRDEGKILRRMPSRVPSLRMLRSFFTDGSLDSLGTSEDTRSKRHSTSDLSDVTFSDVRKEGWLHYKQILTKKGKKVGGGIRQWKRVFAVLRTHSLYLCKDRREAVTCGPAPGEEEQPISIRACLVDISYSETKRKHVFRLTTADFCEYLFQAEDREDMLAWIKVIRENSKAEGEDPGFASQALINKKLNDYRKVSPAGAKPDSSPKGSRGLGIRAEFLKQTGTSAPRSPRQDVAVMKDESSSQKAPWGINLMKKNKKSAPRAFGVRLEDCQPAPDNKNVPLIVEACCKVVEDRGLEYMGIYRVPGNNAVVSSLQEQLNKGATEINLQDERWQDLNVISSLLKSFFRKLPEPLFTDDKYNDFIEANRIEDASERMRTLRKLIRDLPGHYYETLKFLVGHLKTIADHSEKNKMEPRNLALVFGPTLVRTSEDNMTDMVTHMPDRYKIVETLIQHSDWFFSDKEDKGEKTPVDEKEAQSVPNIEYLLPNIGRTAAPGDAPDSTHSGSAKAKGTWPSRKEPSPRELLAIPFISAVNRKRKKRREAEGFGSSTDDDVEHRDPKGREQEDEEAAAAAPGPGKAPHGPGTEPAAPSPEQESALEPGGTGAEPAPDARSIVSGYSTLSTIDRSLCSEVQSVAESRGEEADDERSEFSHVETDTESREGARARLGQVEGGAGGEDKVPPGRPSFNSHRLIQCDTLARRKLGRPRPAGETPVPAGEGHGGWVPPGRPSLREQLRQRLRSSADDMGVRLRRAHSPETRRKKSSWRRHTVVVPGGLKDLNFNEWKEPRGGLDVPPGPCRDKDSGLSSLESTKARPAAPSPAQPGGATKAPSTKSPPGSPGPPAPGPVSPLRFPQCL
SIO_010081: ARHGAP23
subclass of: SO_0000673
so part of: ARHGAP23
location: join(725795..725803,744341..744520,746104..746128,747028..747120,747473..747551,747781..747835,748930..750340,750628..750783,750947..751058,751150..751207,751323..751460,751544..751843,753128..753189,753571..753698,753862..753980,754071..754226,754592..754670,754869..754942,755024..755113,755219..755344,755458..755499,755610..755703,757065..757096,757221..758261)
location: region:725795-758261:1
so has part: feature:725795-725803:1:exon
so has part: feature:744341-744520:1:exon
so has part: feature:746104-746128:1:exon
so has part: feature:747028-747120:1:exon
so has part: feature:747473-747551:1:exon
so has part: feature:747781-747835:1:exon
so has part: feature:748930-750340:1:exon
so has part: feature:750628-750783:1:exon
so has part: feature:750947-751058:1:exon
so has part: feature:751150-751207:1:exon
so has part: feature:751323-751460:1:exon
so has part: feature:751544-751843:1:exon
so has part: feature:753128-753189:1:exon
so has part: feature:753571-753698:1:exon
so has part: feature:753862-753980:1:exon
so has part: feature:754071-754226:1:exon
so has part: feature:754592-754670:1:exon
so has part: feature:754869-754942:1:exon
so has part: feature:755024-755113:1:exon
so has part: feature:755219-755344:1:exon
so has part: feature:755458-755499:1:exon
so has part: feature:755610-755703:1:exon
so has part: feature:757065-757096:1:exon
so has part: feature:757221-758261:1:exon

XP_032058723.1
type: Protein
SIO_000068: ncbiprotein

position:725795:1
position: 725795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758261:1
position: 758261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:725795-725803:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:744341-744520:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:746104-746128:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:747028-747120:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:747473-747551:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:747781-747835:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:748930-750340:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:750628-750783:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:750947-751058:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:751150-751207:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:751323-751460:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:751544-751843:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:753128-753189:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:753571-753698:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:753862-753980:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:754071-754226:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:754592-754670:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:754869-754942:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:755024-755113:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:755219-755344:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:755458-755499:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:755610-755703:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:757065-757096:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:757221-758261:1:exon

ARHGAP23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ARHGAP23
product: Rho GTPase activating protein 23, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202831.1
SIO_010081: ARHGAP23
subclass of: SO_0000673
so part of: ARHGAP23
location: join(731076..731159,744341..744520,746104..746128,747028..747120,747473..747551,747781..747835,748930..750340,750628..750783,750947..751058,751150..751207,751323..751460,751544..751843,753128..753189,753571..753698,753862..753980,754071..754226,754592..754670,754869..754942,755024..755113,755219..755344,755458..755499,755610..755703,757065..757096,757221..759135)
location: region:731076-759135:1
so has part: feature:731076-731159:1:exon
so has part: feature:744341-744520:1:exon
so has part: feature:746104-746128:1:exon
so has part: feature:747028-747120:1:exon
so has part: feature:747473-747551:1:exon
so has part: feature:747781-747835:1:exon
so has part: feature:748930-750340:1:exon
so has part: feature:750628-750783:1:exon
so has part: feature:750947-751058:1:exon
so has part: feature:751150-751207:1:exon
so has part: feature:751323-751460:1:exon
so has part: feature:751544-751843:1:exon
so has part: feature:753128-753189:1:exon
so has part: feature:753571-753698:1:exon
so has part: feature:753862-753980:1:exon
so has part: feature:754071-754226:1:exon
so has part: feature:754592-754670:1:exon
so has part: feature:754869-754942:1:exon
so has part: feature:755024-755113:1:exon
so has part: feature:755219-755344:1:exon
so has part: feature:755458-755499:1:exon
so has part: feature:755610-755703:1:exon
so has part: feature:757065-757096:1:exon
so has part: feature:757221-759135:1:exon

position:731076:1
position: 731076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:731076-731159:1:exon

position:731159:1
position: 731159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:744341-744520:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:746104-746128:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:747028-747120:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:747473-747551:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:747781-747835:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:748930-750340:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:750628-750783:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:750947-751058:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:751150-751207:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:751323-751460:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:751544-751843:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:753128-753189:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:753571-753698:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:753862-753980:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:754071-754226:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:754592-754670:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:754869-754942:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:755024-755113:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:755219-755344:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:755458-755499:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:755610-755703:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:757065-757096:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:757221-759135:1:exon

ARHGAP23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: ARHGAP23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 23 isoform X1
translation: MNGIAFCLVGIPPPAPTPGRRDGASPNDNAPPEGPFPWGGPKTVVLRKSTQGGFGFTLRHFIVYPPESAVHSPAKEEENGNRAGPPRSRLEPMDTIFVKNVREDGPAHQAGLRTGDRLVKVNGESIIGKTYSQVIALIQNSDDVLELSIMPKDEDILQLAYSQDAYLKGNEPYSGGAQSIPEPPPLCYPRKTYPFQARGAEPPPGQPPDPRAHRPAGTRSEGGGSPAHRPEEPQPGGPPQRPAVPHGRPGSFSRSACPSSSASSLPERYGVPPAAPSCYGGGPKHPAEHRTHCGFKEGGGGPRVPGRQECQQALSRWFCSQEPRRSTSEERRYAMPPRYRSVSQDRLGGSATPRGWPHSASHDTLLQPAREGWAHRARSDHSLGRCGRSMEALEPGALLSPRLDRSAWPPERLCRATAAGPPGTHSSFAPPSSSSSSAAAAPREPAAPVQKHPSQPNLQSVDDSGYIGYRSYSPSFQRRTGLLHARSFRDPAFGGLPTFSITQRPAATAAPFPERATPVAPLPAGSTHPGPPLAPEAPQEQRMESSRVPEQHEERREEVVLRQKPPTGRKMPPPLRQMNFVFPDGVKETDICDPPAAGSRGERPAAERSGRRVAPLAAPEDSLASIPFIDEPTSPSIDLKAKHVPASSVVSSAMNSAPAVATSPSSPTFAFALSRHYSQDCSSIKAGRRSSYLLAITTERSKSCDDGLNTFRDEGKILRRMPSRVPSLRMLRSFFTDGSLDSLGTSEDTRSKRHSTSDLSDVTFSDVRKEGWLHYKQILTKKGKKVGGGIRQWKRVFAVLRTHSLYLCKDRREAVTCGPAPGEEEQPISIRACLVDISYSETKRKHVFRLTTADFCEYLFQAEDREDMLAWIKVIRENSKAEGEDPGFASQALINKKLNDYRKVSPAGAKPDSSPKGSRGLGIRAEFLKQTGTSAPRSPRQDVAVMKDESSSQKAPWGINLMKKNKKSAPRAFGVRLEDCQPAPDNKNVPLIVEACCKVVEDRGLEYMGIYRVPGNNAVVSSLQEQLNKGATEINLQDERWQDLNVISSLLKSFFRKLPEPLFTDDKYNDFIEANRIEDASERMRTLRKLIRDLPGHYYETLKFLVGHLKTIADHSEKNKMEPRNLALVFGPTLVRTSEDNMTDMVTHMPDRYKIVETLIQHSDWFFSDKEDKGEKTPVDEKEAQSVPNIEYLLPNIGRTAAPGDAPDSTHSGSAKAKGTWPSRKEPSPRELLAIPFISAVNRKRKKRREAEGFGSSTDDDVEHRDPKGREQEDEEAAAAAPGPGKAPHGPGTEPAAPSPEQESALEPGGTGAEPAPDARSIVSGYSTLSTIDRSLCSEVQSVAESRGEEADDERSEFSHVETDTESREGARARLGQVEGGAGGEDKVPPGRPSFNSHRLIQCDTLARRKLGRPRPAGETPVPAGEGHGGWVPPGRPSLREQLRQRLRSSADDMGVRLRRAHSPETRRKKSSWRRHTVVVPGGLKDLNFNEWKEPRGGLDVPPGPCRDKDSGLSSLESTKARPAAPSPAQPGGATKAPSTKSPPGSPGPPAPGPVSPLRFPQCL
SIO_010081: ARHGAP23
subclass of: SO_0000673
so part of: ARHGAP23
location: join(731115..731159,744341..744520,746104..746128,747028..747120,747473..747551,747781..747835,748930..750340,750628..750783,750947..751058,751150..751207,751323..751460,751544..751843,753128..753189,753571..753698,753862..753980,754071..754226,754592..754670,754869..754942,755024..755113,755219..755344,755458..755499,755610..755703,757065..757096,757221..758261)
location: region:731115-758261:1
so has part: feature:731115-731159:1:exon
so has part: feature:744341-744520:1:exon
so has part: feature:746104-746128:1:exon
so has part: feature:747028-747120:1:exon
so has part: feature:747473-747551:1:exon
so has part: feature:747781-747835:1:exon
so has part: feature:748930-750340:1:exon
so has part: feature:750628-750783:1:exon
so has part: feature:750947-751058:1:exon
so has part: feature:751150-751207:1:exon
so has part: feature:751323-751460:1:exon
so has part: feature:751544-751843:1:exon
so has part: feature:753128-753189:1:exon
so has part: feature:753571-753698:1:exon
so has part: feature:753862-753980:1:exon
so has part: feature:754071-754226:1:exon
so has part: feature:754592-754670:1:exon
so has part: feature:754869-754942:1:exon
so has part: feature:755024-755113:1:exon
so has part: feature:755219-755344:1:exon
so has part: feature:755458-755499:1:exon
so has part: feature:755610-755703:1:exon
so has part: feature:757065-757096:1:exon
so has part: feature:757221-758261:1:exon

XP_032058722.1
type: Protein
SIO_000068: ncbiprotein

position:731115:1
position: 731115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:731115-731159:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:744341-744520:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:746104-746128:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:747028-747120:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:747473-747551:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:747781-747835:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:748930-750340:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:750628-750783:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:750947-751058:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:751150-751207:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:751323-751460:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:751544-751843:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:753128-753189:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:753571-753698:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:753862-753980:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:754071-754226:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:754592-754670:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:754869-754942:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:755024-755113:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:755219-755344:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:755458-755499:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:755610-755703:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:757065-757096:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:757221-758261:1:exon

SRCIN1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: SRCIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(762513..825998)
location: region:762513-825998:-1
so has part: feature:762513-825998:-1:exon
subclass of: SO_0000010

116498561
type: Gene
SIO_000068: ncbigene

position:762513:-1
position: 762513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:825998:-1
position: 825998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:762513-825998:-1:exon

SRCIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SRCIN1
product: SRC kinase signaling inhibitor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032202887.1
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(762513..763155,765570..765707,770837..770989,771069..771223,771503..771752,772069..772381,773277..773424,774359..774489,774739..774914,775066..775244,775575..775618,775731..775823,776187..777016,777448..777541,778076..778274,778390..778582,788669..788692,798947..799230,825922..825998))
location: region:762513-825998:-1
so has part: feature:825922-825998:-1:exon
so has part: feature:798947-799230:-1:exon
so has part: feature:788669-788692:-1:exon
so has part: feature:778390-778582:-1:exon
so has part: feature:778076-778274:-1:exon
so has part: feature:777448-777541:-1:exon
so has part: feature:776187-777016:-1:exon
so has part: feature:775731-775823:-1:exon
so has part: feature:775575-775618:-1:exon
so has part: feature:775066-775244:-1:exon
so has part: feature:774739-774914:-1:exon
so has part: feature:774359-774489:-1:exon
so has part: feature:773277-773424:-1:exon
so has part: feature:772069-772381:-1:exon
so has part: feature:771503-771752:-1:exon
so has part: feature:771069-771223:-1:exon
so has part: feature:770837-770989:-1:exon
so has part: feature:765570-765707:-1:exon
so has part: feature:762513-763155:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:825922-825998:-1:exon

position:825922:-1
position: 825922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:798947-799230:-1:exon

position:798947:-1
position: 798947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799230:-1
position: 799230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:788669-788692:-1:exon

position:788669:-1
position: 788669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788692:-1
position: 788692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:778390-778582:-1:exon

position:778390:-1
position: 778390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778582:-1
position: 778582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:778076-778274:-1:exon

position:778076:-1
position: 778076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778274:-1
position: 778274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:777448-777541:-1:exon

position:777448:-1
position: 777448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777541:-1
position: 777541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:776187-777016:-1:exon

position:776187:-1
position: 776187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777016:-1
position: 777016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:775731-775823:-1:exon

position:775731:-1
position: 775731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775823:-1
position: 775823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:775575-775618:-1:exon

position:775575:-1
position: 775575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775618:-1
position: 775618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:775066-775244:-1:exon

position:775066:-1
position: 775066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775244:-1
position: 775244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:774739-774914:-1:exon

position:774739:-1
position: 774739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:774914:-1
position: 774914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:774359-774489:-1:exon

position:774359:-1
position: 774359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:774489:-1
position: 774489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:773277-773424:-1:exon

position:773277:-1
position: 773277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:773424:-1
position: 773424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:772069-772381:-1:exon

position:772069:-1
position: 772069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:772381:-1
position: 772381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:771503-771752:-1:exon

position:771503:-1
position: 771503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771752:-1
position: 771752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:771069-771223:-1:exon

position:771069:-1
position: 771069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771223:-1
position: 771223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:770837-770989:-1:exon

position:770837:-1
position: 770837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770989:-1
position: 770989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:765570-765707:-1:exon

position:765570:-1
position: 765570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765707:-1
position: 765707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:762513-763155:-1:exon

position:763155:-1
position: 763155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SRCIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SRCIN1
product: SRC kinase signaling inhibitor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032202885.1
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(762513..763155,765570..765707,770361..770489,770837..770989,771069..771223,771503..771752,772069..772381,773277..773424,774359..774489,774739..774914,775066..775244,775575..775618,775731..775823,776187..777016,777448..777541,778076..778274,778390..778582,788669..788692,798947..799230,808423..808540))
location: region:762513-808540:-1
so has part: feature:808423-808540:-1:exon
so has part: feature:798947-799230:-1:exon
so has part: feature:788669-788692:-1:exon
so has part: feature:778390-778582:-1:exon
so has part: feature:778076-778274:-1:exon
so has part: feature:777448-777541:-1:exon
so has part: feature:776187-777016:-1:exon
so has part: feature:775731-775823:-1:exon
so has part: feature:775575-775618:-1:exon
so has part: feature:775066-775244:-1:exon
so has part: feature:774739-774914:-1:exon
so has part: feature:774359-774489:-1:exon
so has part: feature:773277-773424:-1:exon
so has part: feature:772069-772381:-1:exon
so has part: feature:771503-771752:-1:exon
so has part: feature:771069-771223:-1:exon
so has part: feature:770837-770989:-1:exon
so has part: feature:770361-770489:-1:exon
so has part: feature:765570-765707:-1:exon
so has part: feature:762513-763155:-1:exon

position:808540:-1
position: 808540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808423-808540:-1:exon

position:808423:-1
position: 808423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:798947-799230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:788669-788692:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:778390-778582:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:778076-778274:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:777448-777541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:776187-777016:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:775731-775823:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:775575-775618:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:775066-775244:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:774739-774914:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:774359-774489:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:773277-773424:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:772069-772381:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:771503-771752:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:771069-771223:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:770837-770989:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:770361-770489:-1:exon

position:770361:-1
position: 770361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770489:-1
position: 770489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:765570-765707:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:762513-763155:-1:exon

SRCIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SRCIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRC kinase signaling inhibitor 1 isoform X1
translation: MLPRWAKHPFGASPRAAPRLREQERPSEPGDCRLTPLLVDPDRTSTHMISADDAEYPREYRTLGNGTRRFSNVGLVHTSERRHTVIAAQSLEALTGLQKSEMERKRDAFMDHLKNKYPQHALALRGQQERMRDQQPNYWSFKTRSSRHSQGSQPGLADQAKLSFASAESLETMSEAELPLGFNRMNRFRQSLPLSRSTSQTKLRSPGVLFLQFGDETRRVHITHEISSMDTLHALIVHMFPQKLTMGMLKSPNTAILIKDESRNVFYELEDVRDIQDRSIIKIYRKEPLYASFPASHITNGDLRREMVYTSRESSPTRRLNNMSPASHLASGSPPPVLQSSSPSRSRMSYSGGRPPSYAGSPVHHGERLSNLPPAPGVSPSPSAILERRDVKPDEDLAGKNMVLVKNEGLYADPYGMVHEGRLSITSTQSLAGMGDPFGYSGGLYKRGSVRSLSTYSAAALQTELEDGLYKPNAQIYSDTYGPGLGFRMPPSSPQKMSDGRLVDVQPGQSPHSPYSGPPSRSSPVRQSFRKDSCSSVFMESPVSKPRNPSASGPPELFPGPGDRPLSGFSSPVPAKDTETRERMEAMEKQIASLTGLVQSALLRGSEAETPSEKTEATNGGTPPSASTSRSGMGTPVPAPPPPSATSTPAGQPTAITRLHMQLHLHDLQQNASDLRNQLQQLKKLQLQNQETVKTMLRRTETEISVRVTDTMRKHEDPLQRQRSLVEEERLRYLNEEELITQQLNDLEKSVEKIQKDLAHNHRLIPVQELEEKAVVLKQLGETLTDLKAQFPSLQSKMRVVLRVEVEAVKFLKEEPNRLDGLLKRCKTVTDTLAQIRRQVDEGVWTPPNTLSQSPKKMAPETDFSKGLELEMPTSPPVSLHHLTAATETLGMPSFGHSPPQTQTHPSKSNNPSRAPEMVPAKTQTGPETPSKKSADKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELMKAIPDLDFAAKHKQATGSSSAASTPEHKPSKPQHAQKSAGKADPNGRRGSDELTVPRYRTEKPSKSPPPPPPRRSFPSSHGLTTTRSGEVIVTSKKEPGFMKKAESEELETQKPQVKLRRTVSEVVRPASTPPIIASAIKDDDDEDRIIAELEVFQRSSASPFIPKLRYDPLAAAASPGHAAMWPNGASAAAEGWKSGGVSIPAMKMVNPASRLKQSQQGSPDKSKHIKQRMEYMRIQGQQQAARPSKEASETSPAVSEKPASGRTSIPVLTSFGARNSSISF
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(763030..763155,765570..765707,770361..770489,770837..770989,771069..771223,771503..771752,772069..772381,773277..773424,774359..774489,774739..774914,775066..775244,775575..775618,775731..775823,776187..777016,777448..777541,778076..778274,778390..778582,788669..788692,798947..799230,808423..808540))
location: region:763030-808540:-1
so has part: feature:808423-808540:-1:exon
so has part: feature:798947-799230:-1:exon
so has part: feature:788669-788692:-1:exon
so has part: feature:778390-778582:-1:exon
so has part: feature:778076-778274:-1:exon
so has part: feature:777448-777541:-1:exon
so has part: feature:776187-777016:-1:exon
so has part: feature:775731-775823:-1:exon
so has part: feature:775575-775618:-1:exon
so has part: feature:775066-775244:-1:exon
so has part: feature:774739-774914:-1:exon
so has part: feature:774359-774489:-1:exon
so has part: feature:773277-773424:-1:exon
so has part: feature:772069-772381:-1:exon
so has part: feature:771503-771752:-1:exon
so has part: feature:771069-771223:-1:exon
so has part: feature:770837-770989:-1:exon
so has part: feature:770361-770489:-1:exon
so has part: feature:765570-765707:-1:exon
so has part: feature:763030-763155:-1:exon

XP_032058776.1
type: Protein
SIO_000068: ncbiprotein

position:763030:-1
position: 763030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808423-808540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:798947-799230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:788669-788692:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:778390-778582:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:778076-778274:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:777448-777541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:776187-777016:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:775731-775823:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:775575-775618:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:775066-775244:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:774739-774914:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:774359-774489:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:773277-773424:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:772069-772381:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:771503-771752:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:771069-771223:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:770837-770989:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:770361-770489:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:765570-765707:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:763030-763155:-1:exon

SRCIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SRCIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRC kinase signaling inhibitor 1 isoform X3
translation: MISADDAEYPREYRTLGNGTRRFSNVGLVHTSERRHTVIAAQSLEALTGLQKSEMERKRDAFMDHLKNKYPQHALALRGQQERMRDQQPNYWSFKTRSSRHSQGSQPGLADQAKLSFASAESLETMSEAELPLGFNRMNRFRQSLPLSRSTSQTKLRSPGVLFLQFGDETRRVHITHEISSMDTLHALIVHMFPQKLTMGMLKSPNTAILIKDESRNVFYELEDVRDIQDRSIIKIYRKEPLYASFPASHITNGDLRREMVYTSRESSPTRRLNNMSPASHLASGSPPPVLQSSSPSRSRMSYSGGRPPSYAGSPVHHGERLSNLPPAPGVSPSPSAILERRDVKPDEDLAGKNMVLVKNEGLYADPYGMVHEGRLSITSTQSLAGMGDPFGYSGGLYKRGSVRSLSTYSAAALQTELEDGLYKPNAQIYSDTYGPGLGFRMPPSSPQKMSDGRLVDVQPGQSPHSPYSGPPSRSSPVRQSFRKDSCSSVFMESPVSKPRNPSASGPPELFPGPGDRPLSGFSSPVPAKDTETRERMEAMEKQIASLTGLVQSALLRGSEAETPSEKTEATNGGTPPSASTSRSGMGTPVPAPPPPSATSTPAGQPTAITRLHMQLHLHDLQQNASDLRNQLQQLKKLQLQNQETVKTMLRRTETEISVRVTDTMRKHEDPLQRQRSLVEEERLRYLNEEELITQQLNDLEKSVEKIQKDLAHNHRLIPVQELEEKAVVLKQLGETLTDLKAQFPSLQSKMRVVLRVEVEAVKFLKEEPNRLDGLLKRCKTVTDTLAQIRRQVDEGVWTPPNTLSQSPKKMAPETDFSKGLELEMPTSPPVSLHHLTAATETLGMPSFGHSPPQTQTHPSKSNNPSRAPEMVPAKTQTGPETPSKKSADKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELMKAIPDLDFAAKHKQATGSSSAASTPEHKPSKPQHAQKSAGKADPNGRRGSDELTVPRYRTEKPSKSPPPPPPRRSFPSSHGLTTTRSGEVIVTSKKEPGFMKKAESEELETQKPQVKLRRTVSEVVRPASTPPIIASAIKDDDDEDRIIAELESGGVSIPAMKMVNPASRLKQSQQGSPDKSKHIKQRMEYMRIQGQQQAARPSKEASETSPAVSEKPASGRTSIPVLTSFGARNSSISF
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(763030..763155,765570..765707,770837..770989,771069..771223,771503..771752,772069..772381,773277..773424,774359..774489,774739..774914,775066..775244,775575..775618,775731..775823,776187..777016,777448..777541,778076..778274,778390..778582,788669..788692,798947..799207))
location: region:763030-799207:-1
so has part: feature:798947-799207:-1:exon
so has part: feature:788669-788692:-1:exon
so has part: feature:778390-778582:-1:exon
so has part: feature:778076-778274:-1:exon
so has part: feature:777448-777541:-1:exon
so has part: feature:776187-777016:-1:exon
so has part: feature:775731-775823:-1:exon
so has part: feature:775575-775618:-1:exon
so has part: feature:775066-775244:-1:exon
so has part: feature:774739-774914:-1:exon
so has part: feature:774359-774489:-1:exon
so has part: feature:773277-773424:-1:exon
so has part: feature:772069-772381:-1:exon
so has part: feature:771503-771752:-1:exon
so has part: feature:771069-771223:-1:exon
so has part: feature:770837-770989:-1:exon
so has part: feature:765570-765707:-1:exon
so has part: feature:763030-763155:-1:exon

XP_032058778.1
type: Protein
SIO_000068: ncbiprotein

position:799207:-1
position: 799207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:798947-799207:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:788669-788692:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:778390-778582:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:778076-778274:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:777448-777541:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:776187-777016:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:775731-775823:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:775575-775618:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:775066-775244:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:774739-774914:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:774359-774489:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:773277-773424:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:772069-772381:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:771503-771752:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:771069-771223:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:770837-770989:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:765570-765707:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:763030-763155:-1:exon

SRCIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SRCIN1
product: SRC kinase signaling inhibitor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032202886.1
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(763308..763393,765570..765707,770361..770489,770837..770989,771069..771223,771503..771752,772069..772381,773277..773424,774359..774489,774739..774914,775066..775244,775575..775618,775731..775823,776187..777016,777448..777541,778076..778274,778390..778582,788669..788692,798947..799230,808423..808540))
location: region:763308-808540:-1
so has part: feature:808423-808540:-1:exon
so has part: feature:798947-799230:-1:exon
so has part: feature:788669-788692:-1:exon
so has part: feature:778390-778582:-1:exon
so has part: feature:778076-778274:-1:exon
so has part: feature:777448-777541:-1:exon
so has part: feature:776187-777016:-1:exon
so has part: feature:775731-775823:-1:exon
so has part: feature:775575-775618:-1:exon
so has part: feature:775066-775244:-1:exon
so has part: feature:774739-774914:-1:exon
so has part: feature:774359-774489:-1:exon
so has part: feature:773277-773424:-1:exon
so has part: feature:772069-772381:-1:exon
so has part: feature:771503-771752:-1:exon
so has part: feature:771069-771223:-1:exon
so has part: feature:770837-770989:-1:exon
so has part: feature:770361-770489:-1:exon
so has part: feature:765570-765707:-1:exon
so has part: feature:763308-763393:-1:exon

position:763308:-1
position: 763308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808423-808540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:798947-799230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:788669-788692:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:778390-778582:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:778076-778274:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:777448-777541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:776187-777016:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:775731-775823:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:775575-775618:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:775066-775244:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:774739-774914:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:774359-774489:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:773277-773424:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:772069-772381:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:771503-771752:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:771069-771223:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:770837-770989:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:770361-770489:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:765570-765707:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:763308-763393:-1:exon

position:763393:-1
position: 763393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SRCIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SRCIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRC kinase signaling inhibitor 1 isoform X2
translation: MLPRWAKHPFGASPRAAPRLREQERPSEPGDCRLTPLLVDPDRTSTHMISADDAEYPREYRTLGNGTRRFSNVGLVHTSERRHTVIAAQSLEALTGLQKSEMERKRDAFMDHLKNKYPQHALALRGQQERMRDQQPNYWSFKTRSSRHSQGSQPGLADQAKLSFASAESLETMSEAELPLGFNRMNRFRQSLPLSRSTSQTKLRSPGVLFLQFGDETRRVHITHEISSMDTLHALIVHMFPQKLTMGMLKSPNTAILIKDESRNVFYELEDVRDIQDRSIIKIYRKEPLYASFPASHITNGDLRREMVYTSRESSPTRRLNNMSPASHLASGSPPPVLQSSSPSRSRMSYSGGRPPSYAGSPVHHGERLSNLPPAPGVSPSPSAILERRDVKPDEDLAGKNMVLVKNEGLYADPYGMVHEGRLSITSTQSLAGMGDPFGYSGGLYKRGSVRSLSTYSAAALQTELEDGLYKPNAQIYSDTYGPGLGFRMPPSSPQKMSDGRLVDVQPGQSPHSPYSGPPSRSSPVRQSFRKDSCSSVFMESPVSKPRNPSASGPPELFPGPGDRPLSGFSSPVPAKDTETRERMEAMEKQIASLTGLVQSALLRGSEAETPSEKTEATNGGTPPSASTSRSGMGTPVPAPPPPSATSTPAGQPTAITRLHMQLHLHDLQQNASDLRNQLQQLKKLQLQNQETVKTMLRRTETEISVRVTDTMRKHEDPLQRQRSLVEEERLRYLNEEELITQQLNDLEKSVEKIQKDLAHNHRLIPVQELEEKAVVLKQLGETLTDLKAQFPSLQSKMRVVLRVEVEAVKFLKEEPNRLDGLLKRCKTVTDTLAQIRRQVDEGVWTPPNTLSQSPKKMAPETDFSKGLELEMPTSPPVSLHHLTAATETLGMPSFGHSPPQTQTHPSKSNNPSRAPEMVPAKTQTGPETPSKKSADKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELMKAIPDLDFAAKHKQATGSSSAASTPEHKPSKPQHAQKSAGKADPNGRRGSDELTVPRYRTEKPSKSPPPPPPRRSFPSSHGLTTTRSGEVIVTSKKEPGFMKKAESEELETQKPQVKLRRTVSEVVRPASTPPIIASAIKDDDDEDRIIAELEVFQRSSASPFIPKLRYDPLAAAASPGHAAMWPNGASAAAEGWKSGGVSIPAMKMVNPASRLKQSQQGSPDKSKHIKQRMEYMRIQGQQQ
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(763391..763393,765570..765707,770361..770489,770837..770989,771069..771223,771503..771752,772069..772381,773277..773424,774359..774489,774739..774914,775066..775244,775575..775618,775731..775823,776187..777016,777448..777541,778076..778274,778390..778582,788669..788692,798947..799230,808423..808540))
location: region:763391-808540:-1
so has part: feature:808423-808540:-1:exon
so has part: feature:798947-799230:-1:exon
so has part: feature:788669-788692:-1:exon
so has part: feature:778390-778582:-1:exon
so has part: feature:778076-778274:-1:exon
so has part: feature:777448-777541:-1:exon
so has part: feature:776187-777016:-1:exon
so has part: feature:775731-775823:-1:exon
so has part: feature:775575-775618:-1:exon
so has part: feature:775066-775244:-1:exon
so has part: feature:774739-774914:-1:exon
so has part: feature:774359-774489:-1:exon
so has part: feature:773277-773424:-1:exon
so has part: feature:772069-772381:-1:exon
so has part: feature:771503-771752:-1:exon
so has part: feature:771069-771223:-1:exon
so has part: feature:770837-770989:-1:exon
so has part: feature:770361-770489:-1:exon
so has part: feature:765570-765707:-1:exon
so has part: feature:763391-763393:-1:exon

XP_032058777.1
type: Protein
SIO_000068: ncbiprotein

position:763391:-1
position: 763391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808423-808540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:798947-799230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:788669-788692:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:778390-778582:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:778076-778274:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:777448-777541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:776187-777016:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:775731-775823:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:775575-775618:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:775066-775244:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:774739-774914:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:774359-774489:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:773277-773424:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:772069-772381:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:771503-771752:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:771069-771223:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:770837-770989:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:770361-770489:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:765570-765707:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:763391-763393:-1:exon

EPOP
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: EPOP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(853781..856146)
location: region:853781-856146:-1
so has part: feature:853781-856146:-1:exon
subclass of: SO_0000010

116498545
type: Gene
SIO_000068: ncbigene

position:853781:-1
position: 853781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:856146:-1
position: 856146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853781-856146:-1:exon

EPOP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: EPOP
product: elongin BC and polycomb repressive complex 2 associated protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 42% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032202865.1
SIO_010081: EPOP
subclass of: SO_0000673
so part of: EPOP
location: complement(853781..856146)
location: region:853781-856146:-1
so has part: feature:853781-856146:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:853781-856146:-1:exon

EPOP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: EPOP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongin BC and Polycomb repressive complex 2-associated protein
translation: MFLTCEGTFGIVPATMDYNGEARPGDFHAGYQEIEGINLGYLQINGTQMFALAQVLSDLFKDIPRTTISKKMETLKIKSRRCDLKELRTLKAIHSVPTRAVKCSLISKADLEALCTSCKSLSPRRRKRKRKSKRREQLLLPDPGELFACPRPQLLPPCRAGACCAPPAPGRPKLPPALAKARSAPAALLPQPFHHRPFPGLERAPRGRRGCGLPERGGLFGGVLGAYPRDLALLHPAAAHPAAHPAALAEPGRRKRGPCCAKGLFPAEKGPGGARKGRSSAFPGSKRQGTSAGYSSDSDSSLDFGGSSPATSSDSSEEEEEEEEEEEEEEEGDTSCSSEEGSSSESESSSLCSGDSVQSTRYRQAALPRFQPQPPREPLGDERPAEPPPGAGKALRPDPDLLFLSQQLWARTLRASTSESLSPAPALGSGAQPQPELYAKQEASPSSSSSSSSSSSSSSSSSSSSPPPSPSSTPGGDPQQKEGGFGDAEPCAKGKDLHKDASNNRASLGPSDQAERQSEALAGRAASQEPAPGSAPQPPAPELAGSLGPAPPGEAGEPRREHFDRLIRQSKLWCYAKGFNVDGKSLRHGGRTEPCKAAELKSPGSKRAESPSTLSNKALKGNGSERNAKRRRLARGAEAERQQSSSKGRPQKTQRRNAKKGNTHCKRLGSAGPTPPRNSFSLMGNFPCIPSLVVGEDGDLCPASSLGVKNSWALSKTHPLWSWHLGGNAIPVPPSLKFRGYSLEDL
SIO_010081: EPOP
subclass of: SO_0000673
so part of: EPOP
location: complement(853822..856062)
location: region:853822-856062:-1
so has part: feature:853822-856062:-1:exon

XP_032058756.1
type: Protein
SIO_000068: ncbiprotein

position:853822:-1
position: 853822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:856062:-1
position: 856062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853822-856062:-1:exon

MLLT6
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: MLLT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 874474..916818
location: region:874474-916818:1
so has part: feature:874474-916818:1:exon
subclass of: SO_0000010

116498557
type: Gene
SIO_000068: ncbigene

position:874474:1
position: 874474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916818:1
position: 916818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:874474-916818:1:exon

MLLT6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: MLLT6
product: MLLT6, PHD finger containing, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032202881.1
SIO_010081: MLLT6
subclass of: SO_0000673
so part of: MLLT6
location: join(874474..874582,878040..878119,883131..883185,884762..884871,885334..885437,886147..886240,887445..887552,896294..896392,903333..903507,904270..904872,906195..906379,907118..907235,910751..910817,911135..911277,911560..911748,911943..912031,912432..912787,912931..913039,914511..914891,915736..916818)
location: region:874474-916818:1
so has part: feature:874474-874582:1:exon
so has part: feature:878040-878119:1:exon
so has part: feature:883131-883185:1:exon
so has part: feature:884762-884871:1:exon
so has part: feature:885334-885437:1:exon
so has part: feature:886147-886240:1:exon
so has part: feature:887445-887552:1:exon
so has part: feature:896294-896392:1:exon
so has part: feature:903333-903507:1:exon
so has part: feature:904270-904872:1:exon
so has part: feature:906195-906379:1:exon
so has part: feature:907118-907235:1:exon
so has part: feature:910751-910817:1:exon
so has part: feature:911135-911277:1:exon
so has part: feature:911560-911748:1:exon
so has part: feature:911943-912031:1:exon
so has part: feature:912432-912787:1:exon
so has part: feature:912931-913039:1:exon
so has part: feature:914511-914891:1:exon
so has part: feature:915736-916818:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:874474-874582:1:exon

position:874582:1
position: 874582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:878040-878119:1:exon

position:878040:1
position: 878040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878119:1
position: 878119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:883131-883185:1:exon

position:883131:1
position: 883131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883185:1
position: 883185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:884762-884871:1:exon

position:884762:1
position: 884762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:884871:1
position: 884871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:885334-885437:1:exon

position:885334:1
position: 885334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885437:1
position: 885437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:886147-886240:1:exon

position:886147:1
position: 886147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:886240:1
position: 886240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:887445-887552:1:exon

position:887445:1
position: 887445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887552:1
position: 887552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:896294-896392:1:exon

position:896294:1
position: 896294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:896392:1
position: 896392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:903333-903507:1:exon

position:903333:1
position: 903333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:903507:1
position: 903507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:904270-904872:1:exon

position:904270:1
position: 904270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:904872:1
position: 904872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:906195-906379:1:exon

position:906195:1
position: 906195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:906379:1
position: 906379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:907118-907235:1:exon

position:907118:1
position: 907118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:907235:1
position: 907235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:910751-910817:1:exon

position:910751:1
position: 910751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:910817:1
position: 910817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:911135-911277:1:exon

position:911135:1
position: 911135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:911277:1
position: 911277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:911560-911748:1:exon

position:911560:1
position: 911560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:911748:1
position: 911748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:911943-912031:1:exon

position:911943:1
position: 911943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:912031:1
position: 912031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:912432-912787:1:exon

position:912432:1
position: 912432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:912787:1
position: 912787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:912931-913039:1:exon

position:912931:1
position: 912931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913039:1
position: 913039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:914511-914891:1:exon

position:914511:1
position: 914511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:914891:1
position: 914891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:915736-916818:1:exon

position:915736:1
position: 915736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MLLT6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: MLLT6
product: MLLT6, PHD finger containing, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032202882.1
SIO_010081: MLLT6
subclass of: SO_0000673
so part of: MLLT6
location: join(874474..874582,878040..878119,883131..883185,884762..884871,885334..885437,886147..886240,887448..887552,896294..896392,903333..903507,904270..904872,906195..906379,907118..907235,910751..910817,911135..911277,911560..911748,911943..912031,912432..912787,912931..913039,914511..914891,915736..916818)
location: region:874474-916818:1
so has part: feature:874474-874582:1:exon
so has part: feature:878040-878119:1:exon
so has part: feature:883131-883185:1:exon
so has part: feature:884762-884871:1:exon
so has part: feature:885334-885437:1:exon
so has part: feature:886147-886240:1:exon
so has part: feature:887448-887552:1:exon
so has part: feature:896294-896392:1:exon
so has part: feature:903333-903507:1:exon
so has part: feature:904270-904872:1:exon
so has part: feature:906195-906379:1:exon
so has part: feature:907118-907235:1:exon
so has part: feature:910751-910817:1:exon
so has part: feature:911135-911277:1:exon
so has part: feature:911560-911748:1:exon
so has part: feature:911943-912031:1:exon
so has part: feature:912432-912787:1:exon
so has part: feature:912931-913039:1:exon
so has part: feature:914511-914891:1:exon
so has part: feature:915736-916818:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:874474-874582:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:878040-878119:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:883131-883185:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:884762-884871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:885334-885437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:886147-886240:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:887448-887552:1:exon

position:887448:1
position: 887448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:896294-896392:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:903333-903507:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:904270-904872:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:906195-906379:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:907118-907235:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:910751-910817:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:911135-911277:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:911560-911748:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:911943-912031:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:912432-912787:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:912931-913039:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:914511-914891:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:915736-916818:1:exon

MLLT6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: MLLT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein AF-17 isoform X1
translation: MKEMVGGCCVCSDERGWAENPLVYCDGHGCNVAVHQACYGIVQVPTGPWFCRKCESQERAARVRCELCPHKDGALKRTDNGGWAHVVCALYIPEVQFANVLTMEPIVLQYVPHDRFNKTCYICEEQGRESKAASGACMACNRHGCRQAFHVTCAQMAGLLCEEEVLEVDNVKYCGYCKYHFNKMKTSRHSGGSSFIAGRRSRSTSPAQEKHVSHHERPKKSRKDKERPKQKHKKRPESPTSLTPASVPVAAEKGSTSHHEGSKETSEVGRSEVKGKKSSSHGSSHKGKKTGSGKSSAGFSSASSSGTFQPAGTSCSSLQCSQDFVTFPKLEQDDEKYRKPVSSSSSSHCSPLYEGQKGDIFEQKVIFSGFGSIMRFSTSAVSQQRGRDASPVDYKASNPVSGPSVGSSGAAGGSGSSSSSHKRMPSLSMEEGEVLKEKKHKGSKKNKHGPGRPKGGKSKEILGAQLAGSTSTSSSPFSGGSLVSSSISNSSRPFSHTGNLPSLSMESPLLSSGIYTSNKDPISHGGGVLRAVCSTPLSSSLLAHQGTSSLPQLNRSPFASTIPASSSSSVSTTQVFSLAGSTFSLPSSHIFGSPLTSGLSINPLLNQSESSRAEPDLEDCSFGCRGTSPQESLSSMSPISSLPTLFDQTVSCSSSGQLENVPQATPNIEQLLEKQGNGEAGVNIVEMLKALHSLQKENQRLQEQIMTLTAKKERLQLLNVQLSVPFPVVTSSNGPGSQAQYILPANVCNNDSLSISKSPPCKNSFGIENSLSTSSEDPHSGCPSRSSSSLSFHSTPPPLPMLQQSPASLPLPGVQQVNGLARVAGSGLGGGTTASHSLSTVPMVDGLMGTLAGGQQMPINGILGNLNGAQAAQPPSALTQASGPPTLQLSTSLSSVPSLSPLTEQQRHVLHQHEQQLQQLQQLLTSQPLNPEQQALVFQMMQQIQQKRELQRLQMTSSSQLSMSSLLAATSAPLLHSSTSALMTSAPQAPPSSSSLMASLSPQQLNPSNALLAPQATPPLSAPGNSLMASGTGIPPVLTAQTNPFLNLQADGNTPKGTSMNEKGAPLTQDKG
SIO_010081: MLLT6
subclass of: SO_0000673
so part of: MLLT6
location: join(874474..874582,878040..878119,883131..883185,884762..884871,885334..885437,886147..886240,887445..887552,896294..896392,903333..903507,904270..904872,906195..906379,907118..907235,910751..910817,911135..911277,911560..911748,911943..912031,912432..912787,912931..913039,914511..914891,915736..915780)
location: region:874474-915780:1
so has part: feature:874474-874582:1:exon
so has part: feature:878040-878119:1:exon
so has part: feature:883131-883185:1:exon
so has part: feature:884762-884871:1:exon
so has part: feature:885334-885437:1:exon
so has part: feature:886147-886240:1:exon
so has part: feature:887445-887552:1:exon
so has part: feature:896294-896392:1:exon
so has part: feature:903333-903507:1:exon
so has part: feature:904270-904872:1:exon
so has part: feature:906195-906379:1:exon
so has part: feature:907118-907235:1:exon
so has part: feature:910751-910817:1:exon
so has part: feature:911135-911277:1:exon
so has part: feature:911560-911748:1:exon
so has part: feature:911943-912031:1:exon
so has part: feature:912432-912787:1:exon
so has part: feature:912931-913039:1:exon
so has part: feature:914511-914891:1:exon
so has part: feature:915736-915780:1:exon

XP_032058772.1
type: Protein
SIO_000068: ncbiprotein

position:915780:1
position: 915780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:874474-874582:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:878040-878119:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:883131-883185:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:884762-884871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:885334-885437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:886147-886240:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:887445-887552:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:896294-896392:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:903333-903507:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:904270-904872:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:906195-906379:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:907118-907235:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:910751-910817:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:911135-911277:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:911560-911748:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:911943-912031:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:912432-912787:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:912931-913039:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:914511-914891:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:915736-915780:1:exon

MLLT6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: MLLT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein AF-17 isoform X2
translation: MKEMVGGCCVCSDERGWAENPLVYCDGHGCNVAVHQACYGIVQVPTGPWFCRKCESQERAARVRCELCPHKDGALKRTDNGGWAHVVCALYIPEVQFANVLTMEPIVLQYVPHDRFNKTCYICEEQGRESKAASGACMACNRHGCRQAFHVTCAQMAGLLCEEEVLEVDNVKYCGYCKYHFNKMTSRHSGGSSFIAGRRSRSTSPAQEKHVSHHERPKKSRKDKERPKQKHKKRPESPTSLTPASVPVAAEKGSTSHHEGSKETSEVGRSEVKGKKSSSHGSSHKGKKTGSGKSSAGFSSASSSGTFQPAGTSCSSLQCSQDFVTFPKLEQDDEKYRKPVSSSSSSHCSPLYEGQKGDIFEQKVIFSGFGSIMRFSTSAVSQQRGRDASPVDYKASNPVSGPSVGSSGAAGGSGSSSSSHKRMPSLSMEEGEVLKEKKHKGSKKNKHGPGRPKGGKSKEILGAQLAGSTSTSSSPFSGGSLVSSSISNSSRPFSHTGNLPSLSMESPLLSSGIYTSNKDPISHGGGVLRAVCSTPLSSSLLAHQGTSSLPQLNRSPFASTIPASSSSSVSTTQVFSLAGSTFSLPSSHIFGSPLTSGLSINPLLNQSESSRAEPDLEDCSFGCRGTSPQESLSSMSPISSLPTLFDQTVSCSSSGQLENVPQATPNIEQLLEKQGNGEAGVNIVEMLKALHSLQKENQRLQEQIMTLTAKKERLQLLNVQLSVPFPVVTSSNGPGSQAQYILPANVCNNDSLSISKSPPCKNSFGIENSLSTSSEDPHSGCPSRSSSSLSFHSTPPPLPMLQQSPASLPLPGVQQVNGLARVAGSGLGGGTTASHSLSTVPMVDGLMGTLAGGQQMPINGILGNLNGAQAAQPPSALTQASGPPTLQLSTSLSSVPSLSPLTEQQRHVLHQHEQQLQQLQQLLTSQPLNPEQQALVFQMMQQIQQKRELQRLQMTSSSQLSMSSLLAATSAPLLHSSTSALMTSAPQAPPSSSSLMASLSPQQLNPSNALLAPQATPPLSAPGNSLMASGTGIPPVLTAQTNPFLNLQADGNTPKGTSMNEKGAPLTQDKG
SIO_010081: MLLT6
subclass of: SO_0000673
so part of: MLLT6
location: join(874474..874582,878040..878119,883131..883185,884762..884871,885334..885437,886147..886240,887448..887552,896294..896392,903333..903507,904270..904872,906195..906379,907118..907235,910751..910817,911135..911277,911560..911748,911943..912031,912432..912787,912931..913039,914511..914891,915736..915780)
location: region:874474-915780:1
so has part: feature:874474-874582:1:exon
so has part: feature:878040-878119:1:exon
so has part: feature:883131-883185:1:exon
so has part: feature:884762-884871:1:exon
so has part: feature:885334-885437:1:exon
so has part: feature:886147-886240:1:exon
so has part: feature:887448-887552:1:exon
so has part: feature:896294-896392:1:exon
so has part: feature:903333-903507:1:exon
so has part: feature:904270-904872:1:exon
so has part: feature:906195-906379:1:exon
so has part: feature:907118-907235:1:exon
so has part: feature:910751-910817:1:exon
so has part: feature:911135-911277:1:exon
so has part: feature:911560-911748:1:exon
so has part: feature:911943-912031:1:exon
so has part: feature:912432-912787:1:exon
so has part: feature:912931-913039:1:exon
so has part: feature:914511-914891:1:exon
so has part: feature:915736-915780:1:exon

XP_032058773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:874474-874582:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:878040-878119:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:883131-883185:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:884762-884871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:885334-885437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:886147-886240:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:887448-887552:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:896294-896392:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:903333-903507:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:904270-904872:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:906195-906379:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:907118-907235:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:910751-910817:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:911135-911277:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:911560-911748:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:911943-912031:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:912432-912787:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:912931-913039:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:914511-914891:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:915736-915780:1:exon

CISD3
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: CISD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 922221..923646
location: region:922221-923646:1
so has part: feature:922221-923646:1:exon
subclass of: SO_0000010

116498257
type: Gene
SIO_000068: ncbigene

position:922221:1
position: 922221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:923646:1
position: 923646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:922221-923646:1:exon

CISD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: CISD3
product: CDGSH iron sulfur domain 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202503.1
SIO_010081: CISD3
subclass of: SO_0000673
so part of: CISD3
location: join(922221..922415,922657..923646)
location: region:922221-923646:1
so has part: feature:922221-922415:1:exon
so has part: feature:922657-923646:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:922221-922415:1:exon

position:922415:1
position: 922415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:922657-923646:1:exon

position:922657:1
position: 922657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CISD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: CISD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDGSH iron-sulfur domain-containing protein 3, mitochondrial
translation: MLRLGAVTLRVLLGGRARAPPGALLSPALSSAPSAPSSAPPQPLVVELKAGKKYAWCSCGHSKTQPFCDGSHRTAAPGVSPLRFTAEADGAAPLCACKRTRTPPFCDGSHREQAAPPGPRP
SIO_010081: CISD3
subclass of: SO_0000673
so part of: CISD3
location: join(922221..922415,922657..922827)
location: region:922221-922827:1
so has part: feature:922221-922415:1:exon
so has part: feature:922657-922827:1:exon

XP_032058394.1
type: Protein
SIO_000068: ncbiprotein

position:922827:1
position: 922827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:922221-922415:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:922657-922827:1:exon

PCGF2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: PCGF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(924882..932061)
location: region:924882-932061:-1
so has part: feature:924882-932061:-1:exon
subclass of: SO_0000010

116498614
type: Gene
SIO_000068: ncbigene

position:924882:-1
position: 924882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:932061:-1
position: 932061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:924882-932061:-1:exon

PCGF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: PCGF2
product: polycomb group ring finger 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202971.1
SIO_010081: PCGF2
subclass of: SO_0000673
so part of: PCGF2
location: complement(join(924882..925255,925697..925777,926094..926189,926365..926413,926691..926799,926881..926931,927166..927221,928945..929041,929227..929366,931992..932061))
location: region:924882-932061:-1
so has part: feature:931992-932061:-1:exon
so has part: feature:929227-929366:-1:exon
so has part: feature:928945-929041:-1:exon
so has part: feature:927166-927221:-1:exon
so has part: feature:926881-926931:-1:exon
so has part: feature:926691-926799:-1:exon
so has part: feature:926365-926413:-1:exon
so has part: feature:926094-926189:-1:exon
so has part: feature:925697-925777:-1:exon
so has part: feature:924882-925255:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:931992-932061:-1:exon

position:931992:-1
position: 931992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:929227-929366:-1:exon

position:929227:-1
position: 929227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:929366:-1
position: 929366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:928945-929041:-1:exon

position:928945:-1
position: 928945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:929041:-1
position: 929041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:927166-927221:-1:exon

position:927166:-1
position: 927166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927221:-1
position: 927221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:926881-926931:-1:exon

position:926881:-1
position: 926881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926931:-1
position: 926931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:926691-926799:-1:exon

position:926691:-1
position: 926691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926799:-1
position: 926799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:926365-926413:-1:exon

position:926365:-1
position: 926365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926413:-1
position: 926413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:926094-926189:-1:exon

position:926094:-1
position: 926094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926189:-1
position: 926189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:925697-925777:-1:exon

position:925697:-1
position: 925697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:925777:-1
position: 925777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:924882-925255:-1:exon

position:925255:-1
position: 925255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCGF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: PCGF2
product: polycomb group ring finger 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202970.1
SIO_010081: PCGF2
subclass of: SO_0000673
so part of: PCGF2
location: complement(join(924882..925255,925697..925777,926094..926192,926365..926413,926691..926799,926881..926931,927166..927221,928945..929041,929227..929366,931992..932061))
location: region:924882-932061:-1
so has part: feature:931992-932061:-1:exon
so has part: feature:929227-929366:-1:exon
so has part: feature:928945-929041:-1:exon
so has part: feature:927166-927221:-1:exon
so has part: feature:926881-926931:-1:exon
so has part: feature:926691-926799:-1:exon
so has part: feature:926365-926413:-1:exon
so has part: feature:926094-926192:-1:exon
so has part: feature:925697-925777:-1:exon
so has part: feature:924882-925255:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:931992-932061:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:929227-929366:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:928945-929041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:927166-927221:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:926881-926931:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:926691-926799:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:926365-926413:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:926094-926192:-1:exon

position:926192:-1
position: 926192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:925697-925777:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:924882-925255:-1:exon

PCGF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: PCGF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb group RING finger protein 2 isoform X2
translation: MHRTTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPMAEVPNGSNEDRGEVSEQDKGNLADDEIVSLSIEFYEGTREEKKGSIENGDLEKDKNGVRFLRCPAAMTVMHLAKFLRNKMDVPSKYKVEVLYEDEPLREYYTLMDIAYIYPWRRNGPLPLKYRVQPACKRLKLSQPATSECTNTSGASECESVSDKAHSPATLPATSSSLPSPGTPSHGSPSSTAGSGPGPALNGSSSNCHPLPPAASRCRKTTVNGSTASALT
SIO_010081: PCGF2
subclass of: SO_0000673
so part of: PCGF2
location: complement(join(924923..925255,925697..925777,926094..926189,926365..926413,926691..926799,926881..926931,927166..927221,928945..929041,929227..929338))
location: region:924923-929338:-1
so has part: feature:929227-929338:-1:exon
so has part: feature:928945-929041:-1:exon
so has part: feature:927166-927221:-1:exon
so has part: feature:926881-926931:-1:exon
so has part: feature:926691-926799:-1:exon
so has part: feature:926365-926413:-1:exon
so has part: feature:926094-926189:-1:exon
so has part: feature:925697-925777:-1:exon
so has part: feature:924923-925255:-1:exon

XP_032058862.1
type: Protein
SIO_000068: ncbiprotein

position:924923:-1
position: 924923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:929338:-1
position: 929338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:929227-929338:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:928945-929041:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:927166-927221:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:926881-926931:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:926691-926799:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:926365-926413:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:926094-926189:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:925697-925777:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:924923-925255:-1:exon

PCGF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: PCGF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb group RING finger protein 2 isoform X1
translation: MHRTTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPMAEVPNGSNEDRGEVSEQDKGNLADDEIVSLSIEFYEGTREEKKGSIENGDLEKDKKNGVRFLRCPAAMTVMHLAKFLRNKMDVPSKYKVEVLYEDEPLREYYTLMDIAYIYPWRRNGPLPLKYRVQPACKRLKLSQPATSECTNTSGASECESVSDKAHSPATLPATSSSLPSPGTPSHGSPSSTAGSGPGPALNGSSSNCHPLPPAASRCRKTTVNGSTASALT
SIO_010081: PCGF2
subclass of: SO_0000673
so part of: PCGF2
location: complement(join(924923..925255,925697..925777,926094..926192,926365..926413,926691..926799,926881..926931,927166..927221,928945..929041,929227..929338))
location: region:924923-929338:-1
so has part: feature:929227-929338:-1:exon
so has part: feature:928945-929041:-1:exon
so has part: feature:927166-927221:-1:exon
so has part: feature:926881-926931:-1:exon
so has part: feature:926691-926799:-1:exon
so has part: feature:926365-926413:-1:exon
so has part: feature:926094-926192:-1:exon
so has part: feature:925697-925777:-1:exon
so has part: feature:924923-925255:-1:exon

XP_032058861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:929227-929338:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:928945-929041:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:927166-927221:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:926881-926931:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:926691-926799:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:926365-926413:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:926094-926192:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:925697-925777:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:924923-925255:-1:exon

TRNAN-GUU
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAN-GUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 933512..933585
location: region:933512-933585:1
so has part: feature:933512-933585:1:exon
subclass of: SO_0000663

116498628
type: Gene
SIO_000068: ncbigene

position:933512:1
position: 933512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933585:1
position: 933585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:933512-933585:1:exon

TRNAN-GUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAN-GUU
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:933546..933548,aa:Asn,seq:gtt)
SIO_010081: TRNAN-GUU
subclass of: SO_0000673
so part of: TRNAN-GUU
location: 933512..933585
location: region:933512-933585:1
so has part: feature:933512-933585:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:933512-933585:1:exon

PSMB3
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: PSMB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 935704..938652
location: region:935704-938652:1
so has part: feature:935704-938652:1:exon
subclass of: SO_0000010

116498431
type: Gene
SIO_000068: ncbigene

position:935704:1
position: 935704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:938652:1
position: 938652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:935704-938652:1:exon

PSMB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: PSMB3
product: proteasome 20S subunit beta 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202706.1
SIO_010081: PSMB3
subclass of: SO_0000673
so part of: PSMB3
location: join(935704..935778,936318..936502,937013..937120,937522..937699,937959..938053,938535..938652)
location: region:935704-938652:1
so has part: feature:935704-935778:1:exon
so has part: feature:936318-936502:1:exon
so has part: feature:937013-937120:1:exon
so has part: feature:937522-937699:1:exon
so has part: feature:937959-938053:1:exon
so has part: feature:938535-938652:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:935704-935778:1:exon

position:935778:1
position: 935778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:936318-936502:1:exon

position:936318:1
position: 936318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:936502:1
position: 936502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:937013-937120:1:exon

position:937013:1
position: 937013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937120:1
position: 937120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:937522-937699:1:exon

position:937522:1
position: 937522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937699:1
position: 937699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:937959-938053:1:exon

position:937959:1
position: 937959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:938053:1
position: 938053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:938535-938652:1:exon

position:938535:1
position: 938535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSMB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: PSMB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit beta type-3
translation: MSIMSYNGGAVMAMKGKGCVAIAADRRFGIQAQMVTTDFQKIFPMGERLYIGLAGLATDVQTVAQRLKFRLNLYELKEGRQIKPQTFMSMVSNLLYERRFGPYYTEPVIAGLDPITHEPFICSLDLIGCPMITDDFVVSGTCSEQMYGMCESLWEPDMEPDHLFETISQAMLNAVDRDAVSGMGVIVHIIEKDKITTRTLKARMD
SIO_010081: PSMB3
subclass of: SO_0000673
so part of: PSMB3
location: join(935776..935778,936318..936502,937013..937120,937522..937699,937959..938053,938535..938583)
location: region:935776-938583:1
so has part: feature:935776-935778:1:exon
so has part: feature:936318-936502:1:exon
so has part: feature:937013-937120:1:exon
so has part: feature:937522-937699:1:exon
so has part: feature:937959-938053:1:exon
so has part: feature:938535-938583:1:exon

XP_032058597.1
type: Protein
SIO_000068: ncbiprotein

position:935776:1
position: 935776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:938583:1
position: 938583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:935776-935778:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:936318-936502:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:937013-937120:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:937522-937699:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:937959-938053:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:938535-938583:1:exon

PIP4K2B
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: PIP4K2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(940933..959422)
location: region:940933-959422:-1
so has part: feature:940933-959422:-1:exon
subclass of: SO_0000010

116498394
type: Gene
SIO_000068: ncbigene

position:940933:-1
position: 940933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:959422:-1
position: 959422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:940933-959422:-1:exon

PIP4K2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: PIP4K2B
product: phosphatidylinositol-5-phosphate 4-kinase type 2 beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202650.1
SIO_010081: PIP4K2B
subclass of: SO_0000673
so part of: PIP4K2B
location: complement(join(940933..943920,944542..944645,945005..945263,945642..945755,946869..946907,947327..947473,947996..948148,951496..951592,952270..952367,959276..959422))
location: region:940933-959422:-1
so has part: feature:959276-959422:-1:exon
so has part: feature:952270-952367:-1:exon
so has part: feature:951496-951592:-1:exon
so has part: feature:947996-948148:-1:exon
so has part: feature:947327-947473:-1:exon
so has part: feature:946869-946907:-1:exon
so has part: feature:945642-945755:-1:exon
so has part: feature:945005-945263:-1:exon
so has part: feature:944542-944645:-1:exon
so has part: feature:940933-943920:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:959276-959422:-1:exon

position:959276:-1
position: 959276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:952270-952367:-1:exon

position:952270:-1
position: 952270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:952367:-1
position: 952367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:951496-951592:-1:exon

position:951496:-1
position: 951496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:951592:-1
position: 951592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:947996-948148:-1:exon

position:947996:-1
position: 947996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:948148:-1
position: 948148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:947327-947473:-1:exon

position:947327:-1
position: 947327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:947473:-1
position: 947473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:946869-946907:-1:exon

position:946869:-1
position: 946869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:946907:-1
position: 946907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:945642-945755:-1:exon

position:945642:-1
position: 945642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945755:-1
position: 945755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:945005-945263:-1:exon

position:945005:-1
position: 945005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945263:-1
position: 945263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:944542-944645:-1:exon

position:944542:-1
position: 944542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944645:-1
position: 944645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:940933-943920:-1:exon

position:943920:-1
position: 943920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PIP4K2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: PIP4K2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 5-phosphate 4-kinase type-2 beta
translation: MWGANHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKENLPSRFKFKEYCPLVFRNLRERFGIDDQDYQNSVTRSAPVNSDSQGRCGARFLTTYDRRFVIKAVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTRNVFSHRLTVHRKYDLKGSTVSREASDKEKAKDLPTFKDNDFLNEGQKLHVGEESKKNFLEKLKRDVEFLAQLKIMDYSLLVGIHDVDRAEQEEMEVEDRAEDEECENDGLGGNPISSYGTPPDSPGNLLNYPRFFGPGEFDPSVDVYAMKSHESAPKKEVYFMAIIDILTPYDAKKKAAHAAKTVKHGAGAEISTVNPEQYSKRFNEFMSNILT
SIO_010081: PIP4K2B
subclass of: SO_0000673
so part of: PIP4K2B
location: complement(join(943840..943920,944542..944645,945005..945263,945642..945755,946869..946907,947327..947473,947996..948148,951496..951592,952270..952367,959276..959296))
location: region:943840-959296:-1
so has part: feature:959276-959296:-1:exon
so has part: feature:952270-952367:-1:exon
so has part: feature:951496-951592:-1:exon
so has part: feature:947996-948148:-1:exon
so has part: feature:947327-947473:-1:exon
so has part: feature:946869-946907:-1:exon
so has part: feature:945642-945755:-1:exon
so has part: feature:945005-945263:-1:exon
so has part: feature:944542-944645:-1:exon
so has part: feature:943840-943920:-1:exon

XP_032058541.1
type: Protein
SIO_000068: ncbiprotein

position:943840:-1
position: 943840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:959296:-1
position: 959296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:959276-959296:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:952270-952367:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:951496-951592:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:947996-948148:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:947327-947473:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:946869-946907:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:945642-945755:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:945005-945263:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:944542-944645:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:943840-943920:-1:exon

CWC25
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: CWC25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(960264..965803)
location: region:960264-965803:-1
so has part: feature:960264-965803:-1:exon
subclass of: SO_0000010

116498438
type: Gene
SIO_000068: ncbigene

position:960264:-1
position: 960264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:965803:-1
position: 965803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:960264-965803:-1:exon

CWC25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: CWC25
product: CWC25 spliceosome associated protein homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032202712.1
SIO_010081: CWC25
subclass of: SO_0000673
so part of: CWC25
location: complement(join(960264..960946,961185..961346,961950..962030,962599..962789,963259..963328,963569..963690,964043..964112,964740..964976,965240..965412,965731..965803))
location: region:960264-965803:-1
so has part: feature:965731-965803:-1:exon
so has part: feature:965240-965412:-1:exon
so has part: feature:964740-964976:-1:exon
so has part: feature:964043-964112:-1:exon
so has part: feature:963569-963690:-1:exon
so has part: feature:963259-963328:-1:exon
so has part: feature:962599-962789:-1:exon
so has part: feature:961950-962030:-1:exon
so has part: feature:961185-961346:-1:exon
so has part: feature:960264-960946:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:965731-965803:-1:exon

position:965731:-1
position: 965731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:965240-965412:-1:exon

position:965240:-1
position: 965240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:965412:-1
position: 965412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:964740-964976:-1:exon

position:964740:-1
position: 964740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:964976:-1
position: 964976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:964043-964112:-1:exon

position:964043:-1
position: 964043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:964112:-1
position: 964112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:963569-963690:-1:exon

position:963569:-1
position: 963569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:963690:-1
position: 963690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:963259-963328:-1:exon

position:963259:-1
position: 963259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:963328:-1
position: 963328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:962599-962789:-1:exon

position:962599:-1
position: 962599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:962789:-1
position: 962789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:961950-962030:-1:exon

position:961950:-1
position: 961950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:962030:-1
position: 962030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:961185-961346:-1:exon

position:961185:-1
position: 961185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:961346:-1
position: 961346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:960264-960946:-1:exon

position:960946:-1
position: 960946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CWC25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: CWC25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor CWC25 homolog
translation: MGGGDLNLKKSWHPQTLRNVEKVWKAEQKHEAERKKIEELQRELQEERAREEMQRYAEDMGTVRKREEKLEWMYQGPGGMVNREEYLMGRPVDKYVFEKTEDKDAGCSNETGLLPGSIFAKSGANSVLDMANKIREDPLFMIRKREEEKKREVLNNPVKMKKIKELLQNSLDKKKKKKEKKKKHKKHRHRSSSSESASSDDERSKARSQKKMNSSSWKPAPTKVPGYGLQVRDSDLSHKSRSSPAASQERAPHKHRDRSRSRSQSRSPQRRGSKKSTEQLGCRGSRSPSRHSKHNREEKGRARSPSPKKSYRRQHVPGYTRKISPEELERKRQEMMENAKWREEERANNLRKHRKEEELERELEKLDSRDGKFLHRLKLESASTSTLEDRVKRNIHSLQRTPAALEKNFMQR
SIO_010081: CWC25
subclass of: SO_0000673
so part of: CWC25
location: complement(join(960832..960946,961185..961346,961950..962030,962599..962789,963259..963328,963569..963690,964043..964112,964740..964976,965240..965412,965731..965748))
location: region:960832-965748:-1
so has part: feature:965731-965748:-1:exon
so has part: feature:965240-965412:-1:exon
so has part: feature:964740-964976:-1:exon
so has part: feature:964043-964112:-1:exon
so has part: feature:963569-963690:-1:exon
so has part: feature:963259-963328:-1:exon
so has part: feature:962599-962789:-1:exon
so has part: feature:961950-962030:-1:exon
so has part: feature:961185-961346:-1:exon
so has part: feature:960832-960946:-1:exon

XP_032058603.1
type: Protein
SIO_000068: ncbiprotein

position:960832:-1
position: 960832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:965748:-1
position: 965748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:965731-965748:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:965240-965412:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:964740-964976:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:964043-964112:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:963569-963690:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:963259-963328:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:962599-962789:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:961950-962030:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:961185-961346:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:960832-960946:-1:exon

LOC116498497
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116498497
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(966369..968726)
location: region:966369-968726:-1
so has part: feature:966369-968726:-1:exon
subclass of: SO_0000011

116498497
type: Gene
SIO_000068: ncbigene

position:966369:-1
position: 966369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968726:-1
position: 968726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:966369-968726:-1:exon

LOC116498497
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116498497
product: uncharacterized LOC116498497
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004254185.1
SIO_010081: LOC116498497
subclass of: SO_0000673
so part of: LOC116498497
location: complement(join(966369..967077,968138..968231,968609..968726))
location: region:966369-968726:-1
so has part: feature:968609-968726:-1:exon
so has part: feature:968138-968231:-1:exon
so has part: feature:966369-967077:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:968609-968726:-1:exon

position:968609:-1
position: 968609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:968138-968231:-1:exon

position:968138:-1
position: 968138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968231:-1
position: 968231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:966369-967077:-1:exon

position:967077:-1
position: 967077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(966891..966962)
location: region:966891-966962:-1
so has part: feature:966891-966962:-1:exon
subclass of: SO_0000663

116498649
type: Gene
SIO_000068: ncbigene

position:966891:-1
position: 966891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:966962:-1
position: 966962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:966891-966962:-1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(966928..966930),aa:Cys,seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: complement(966891..966962)
location: region:966891-966962:-1
so has part: feature:966891-966962:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:966891-966962:-1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(967201..967272)
location: region:967201-967272:-1
so has part: feature:967201-967272:-1:exon
subclass of: SO_0000663

116498629
type: Gene
SIO_000068: ncbigene

position:967201:-1
position: 967201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:967272:-1
position: 967272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:967201-967272:-1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(967238..967240),aa:Cys,seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: complement(967201..967272)
location: region:967201-967272:-1
so has part: feature:967201-967272:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:967201-967272:-1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(967663..967734)
location: region:967663-967734:-1
so has part: feature:967663-967734:-1:exon
subclass of: SO_0000663

116498630
type: Gene
SIO_000068: ncbigene

position:967663:-1
position: 967663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:967734:-1
position: 967734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:967663-967734:-1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(967700..967702),aa:Cys,seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: complement(967663..967734)
location: region:967663-967734:-1
so has part: feature:967663-967734:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:967663-967734:-1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(967966..968037)
location: region:967966-968037:-1
so has part: feature:967966-968037:-1:exon
subclass of: SO_0000663

116498631
type: Gene
SIO_000068: ncbigene

position:967966:-1
position: 967966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968037:-1
position: 968037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:967966-968037:-1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(968003..968005),aa:Cys,seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: complement(967966..968037)
location: region:967966-968037:-1
so has part: feature:967966-968037:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:967966-968037:-1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(968312..968383)
location: region:968312-968383:-1
so has part: feature:968312-968383:-1:exon
subclass of: SO_0000663

116498632
type: Gene
SIO_000068: ncbigene

position:968312:-1
position: 968312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968383:-1
position: 968383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:968312-968383:-1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(968349..968351),aa:Cys,seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: complement(968312..968383)
location: region:968312-968383:-1
so has part: feature:968312-968383:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:968312-968383:-1:exon

PSMC3IP
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: PSMC3IP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 970228..972745
location: region:970228-972745:1
so has part: feature:970228-972745:1:exon
subclass of: SO_0000010

116498443
type: Gene
SIO_000068: ncbigene

position:970228:1
position: 970228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:972745:1
position: 972745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:970228-972745:1:exon

PSMC3IP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: PSMC3IP
product: PSMC3 interacting protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202718.1
SIO_010081: PSMC3IP
subclass of: SO_0000673
so part of: PSMC3IP
location: join(970228..970274,970360..970463,970541..970630,970717..970828,970930..971075,971533..971586,972060..972119,972204..972745)
location: region:970228-972745:1
so has part: feature:970228-970274:1:exon
so has part: feature:970360-970463:1:exon
so has part: feature:970541-970630:1:exon
so has part: feature:970717-970828:1:exon
so has part: feature:970930-971075:1:exon
so has part: feature:971533-971586:1:exon
so has part: feature:972060-972119:1:exon
so has part: feature:972204-972745:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:970228-970274:1:exon

position:970274:1
position: 970274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:970360-970463:1:exon

position:970360:1
position: 970360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:970463:1
position: 970463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:970541-970630:1:exon

position:970541:1
position: 970541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:970630:1
position: 970630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:970717-970828:1:exon

position:970717:1
position: 970717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:970828:1
position: 970828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:970930-971075:1:exon

position:970930:1
position: 970930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:971075:1
position: 971075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:971533-971586:1:exon

position:971533:1
position: 971533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:971586:1
position: 971586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:972060-972119:1:exon

position:972060:1
position: 972060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:972119:1
position: 972119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:972204-972745:1:exon

position:972204:1
position: 972204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSMC3IP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: PSMC3IP
product: PSMC3 interacting protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032202719.1
SIO_010081: PSMC3IP
subclass of: SO_0000673
so part of: PSMC3IP
location: join(970228..970271,970360..970463,970541..970630,970717..970828,970930..971075,971533..971586,972060..972119,972204..972745)
location: region:970228-972745:1
so has part: feature:970228-970271:1:exon
so has part: feature:970360-970463:1:exon
so has part: feature:970541-970630:1:exon
so has part: feature:970717-970828:1:exon
so has part: feature:970930-971075:1:exon
so has part: feature:971533-971586:1:exon
so has part: feature:972060-972119:1:exon
so has part: feature:972204-972745:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:970228-970271:1:exon

position:970271:1
position: 970271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:970360-970463:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:970541-970630:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:970717-970828:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:970930-971075:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:971533-971586:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:972060-972119:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:972204-972745:1:exon

PSMC3IP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: PSMC3IP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homologous-pairing protein 2 homolog isoform X1
translation: MSKGREGPAAGGAAAVLLRYLREQNRPYSAQDVFGNLQREHGLGKAAVVKALEQLAQQGRIREKVYGKQKVYFADQEQLPAASDEELRGLDGEIAALSAQLQALQQGCRQMEAELRELSGSMTTPEMAREVEELRKDCAGYADKLERIKSATNHVTLEEKEKVCSEQRLYCKEWRKRKRMATELLDAILEGYPKSKKQFFEEVGIETDEDHNVTLPAAV
SIO_010081: PSMC3IP
subclass of: SO_0000673
so part of: PSMC3IP
location: join(970241..970274,970360..970463,970541..970630,970717..970828,970930..971075,971533..971586,972060..972119,972204..972263)
location: region:970241-972263:1
so has part: feature:970241-970274:1:exon
so has part: feature:970360-970463:1:exon
so has part: feature:970541-970630:1:exon
so has part: feature:970717-970828:1:exon
so has part: feature:970930-971075:1:exon
so has part: feature:971533-971586:1:exon
so has part: feature:972060-972119:1:exon
so has part: feature:972204-972263:1:exon

XP_032058609.1
type: Protein
SIO_000068: ncbiprotein

position:970241:1
position: 970241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:972263:1
position: 972263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:970241-970274:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:970360-970463:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:970541-970630:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:970717-970828:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:970930-971075:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:971533-971586:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:972060-972119:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:972204-972263:1:exon

PSMC3IP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: PSMC3IP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homologous-pairing protein 2 homolog isoform X2
translation: MSKGREGPAAGAAAVLLRYLREQNRPYSAQDVFGNLQREHGLGKAAVVKALEQLAQQGRIREKVYGKQKVYFADQEQLPAASDEELRGLDGEIAALSAQLQALQQGCRQMEAELRELSGSMTTPEMAREVEELRKDCAGYADKLERIKSATNHVTLEEKEKVCSEQRLYCKEWRKRKRMATELLDAILEGYPKSKKQFFEEVGIETDEDHNVTLPAAV
SIO_010081: PSMC3IP
subclass of: SO_0000673
so part of: PSMC3IP
location: join(970241..970271,970360..970463,970541..970630,970717..970828,970930..971075,971533..971586,972060..972119,972204..972263)
location: region:970241-972263:1
so has part: feature:970241-970271:1:exon
so has part: feature:970360-970463:1:exon
so has part: feature:970541-970630:1:exon
so has part: feature:970717-970828:1:exon
so has part: feature:970930-971075:1:exon
so has part: feature:971533-971586:1:exon
so has part: feature:972060-972119:1:exon
so has part: feature:972204-972263:1:exon

XP_032058610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:970241-970271:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:970360-970463:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:970541-970630:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:970717-970828:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:970930-971075:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:971533-971586:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:972060-972119:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:972204-972263:1:exon

MLX
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: MLX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(972963..977314)
location: region:972963-977314:-1
so has part: feature:972963-977314:-1:exon
subclass of: SO_0000010

116498414
type: Gene
SIO_000068: ncbigene

position:972963:-1
position: 972963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977314:-1
position: 977314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:972963-977314:-1:exon

MLX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: MLX
product: MAX dimerization protein MLX
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202679.1
SIO_010081: MLX
subclass of: SO_0000673
so part of: MLX
location: complement(join(972963..974424,974797..974998,975297..975396,975628..975727,976023..976129,976497..976586,976723..976759,977259..977314))
location: region:972963-977314:-1
so has part: feature:977259-977314:-1:exon
so has part: feature:976723-976759:-1:exon
so has part: feature:976497-976586:-1:exon
so has part: feature:976023-976129:-1:exon
so has part: feature:975628-975727:-1:exon
so has part: feature:975297-975396:-1:exon
so has part: feature:974797-974998:-1:exon
so has part: feature:972963-974424:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:977259-977314:-1:exon

position:977259:-1
position: 977259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:976723-976759:-1:exon

position:976723:-1
position: 976723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976759:-1
position: 976759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:976497-976586:-1:exon

position:976497:-1
position: 976497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976586:-1
position: 976586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:976023-976129:-1:exon

position:976023:-1
position: 976023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976129:-1
position: 976129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:975628-975727:-1:exon

position:975628:-1
position: 975628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:975727:-1
position: 975727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:975297-975396:-1:exon

position:975297:-1
position: 975297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:975396:-1
position: 975396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:974797-974998:-1:exon

position:974797:-1
position: 974797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974998:-1
position: 974998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:972963-974424:-1:exon

position:974424:-1
position: 974424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MLX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: MLX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: max-like protein X
translation: MAEPPGAAAEDSWGKVDAAYGDNGLDSALLGDCARKGSVVSRANSIGSTSASSVPNTDDEDSDYHQEPYKESYKDQRRRAHTQAEQKRRDAIKKGYDDLQAIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEEEVSILRKEVMALKIMKVNYEQIVKAHQDNPNEGKDQISDQMKFNVFQGVMDSLFQSFNASISVTSFQELSACVFSWIEEHCKPQTLRDIVIGVLHQLKSQLY
SIO_010081: MLX
subclass of: SO_0000673
so part of: MLX
location: complement(join(974368..974424,974797..974998,975297..975396,975628..975727,976023..976129,976497..976586,976723..976759,977259..977303))
location: region:974368-977303:-1
so has part: feature:977259-977303:-1:exon
so has part: feature:976723-976759:-1:exon
so has part: feature:976497-976586:-1:exon
so has part: feature:976023-976129:-1:exon
so has part: feature:975628-975727:-1:exon
so has part: feature:975297-975396:-1:exon
so has part: feature:974797-974998:-1:exon
so has part: feature:974368-974424:-1:exon

XP_032058570.1
type: Protein
SIO_000068: ncbiprotein

position:974368:-1
position: 974368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977303:-1
position: 977303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:977259-977303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:976723-976759:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:976497-976586:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:976023-976129:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:975628-975727:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:975297-975396:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:974797-974998:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:974368-974424:-1:exon

LOC116498258
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116498258
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(978197..980242)
location: region:978197-980242:-1
so has part: feature:978197-980242:-1:exon
subclass of: SO_0000010

116498258
type: Gene
SIO_000068: ncbigene

position:978197:-1
position: 978197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:980242:-1
position: 980242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:978197-980242:-1:exon

LOC116498258
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116498258
product: coenzyme Q-binding protein COQ10 homolog B, mitochondrial-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032202504.1
SIO_010081: LOC116498258
subclass of: SO_0000673
so part of: LOC116498258
location: complement(join(978197..978488,978593..978694,979020..979209,979303..979636,980212..980242))
location: region:978197-980242:-1
so has part: feature:980212-980242:-1:exon
so has part: feature:979303-979636:-1:exon
so has part: feature:979020-979209:-1:exon
so has part: feature:978593-978694:-1:exon
so has part: feature:978197-978488:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:980212-980242:-1:exon

position:980212:-1
position: 980212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:979303-979636:-1:exon

position:979303:-1
position: 979303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:979636:-1
position: 979636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:979020-979209:-1:exon

position:979020:-1
position: 979020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:979209:-1
position: 979209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:978593-978694:-1:exon

position:978593:-1
position: 978593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978694:-1
position: 978694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:978197-978488:-1:exon

position:978488:-1
position: 978488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116498258
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116498258
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coenzyme Q-binding protein COQ10 homolog B, mitochondrial-like
translation: MSWNRCGSALAGTRGCPAPVPAQGTGPRRAEPSHGRVRADAARGCCPVRHQHRDPRAPGHRDRGRCRAPRGQQLRFSDPLFILSRCPAAHRSPCPQPVQPARPFLSLVGSGATGYREQRVLGYSAQQMYELVANVGDYRLFVPWCRRSAVLSRRGHVLRAELEVGFPPLQERYLSEVSLGSRQIRAVSSDCRLFRHLETLWRFGPGLPGRTDSCSLDFSVSFEFRSALHSRLAGLFLDEVAKQMVAAFEGRARELFGPQAAARPAQRAARRA
SIO_010081: LOC116498258
subclass of: SO_0000673
so part of: LOC116498258
location: complement(join(978327..978488,978593..978694,979020..979209,979303..979636,980212..980242))
location: region:978327-980242:-1
so has part: feature:980212-980242:-1:exon
so has part: feature:979303-979636:-1:exon
so has part: feature:979020-979209:-1:exon
so has part: feature:978593-978694:-1:exon
so has part: feature:978327-978488:-1:exon

XP_032058395.1
type: Protein
SIO_000068: ncbiprotein

position:978327:-1
position: 978327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:980212-980242:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:979303-979636:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:979020-979209:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:978593-978694:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:978327-978488:-1:exon

COASY
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: COASY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(980063..984718)
location: region:980063-984718:-1
so has part: feature:980063-984718:-1:exon
subclass of: SO_0000010

116498260
type: Gene
SIO_000068: ncbigene

position:980063:-1
position: 980063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:984718:-1
position: 984718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:980063-984718:-1:exon

COASY
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: COASY
product: Coenzyme A synthase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032202505.1
SIO_010081: COASY
subclass of: SO_0000673
so part of: COASY
location: complement(join(980063..980494,980925..981071,981148..981245,981636..981720,982208..982272,982565..982754,983215..983346,983428..983642,984046..984468,984691..984718))
location: region:980063-984718:-1
so has part: feature:984691-984718:-1:exon
so has part: feature:984046-984468:-1:exon
so has part: feature:983428-983642:-1:exon
so has part: feature:983215-983346:-1:exon
so has part: feature:982565-982754:-1:exon
so has part: feature:982208-982272:-1:exon
so has part: feature:981636-981720:-1:exon
so has part: feature:981148-981245:-1:exon
so has part: feature:980925-981071:-1:exon
so has part: feature:980063-980494:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:984691-984718:-1:exon

position:984691:-1
position: 984691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:984046-984468:-1:exon

position:984046:-1
position: 984046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:984468:-1
position: 984468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:983428-983642:-1:exon

position:983428:-1
position: 983428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:983642:-1
position: 983642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:983215-983346:-1:exon

position:983215:-1
position: 983215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:983346:-1
position: 983346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:982565-982754:-1:exon

position:982565:-1
position: 982565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:982754:-1
position: 982754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:982208-982272:-1:exon

position:982208:-1
position: 982208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:982272:-1
position: 982272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:981636-981720:-1:exon

position:981636:-1
position: 981636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981720:-1
position: 981720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:981148-981245:-1:exon

position:981148:-1
position: 981148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981245:-1
position: 981245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:980925-981071:-1:exon

position:980925:-1
position: 980925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981071:-1
position: 981071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:980063-980494:-1:exon

position:980494:-1
position: 980494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

COASY
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: COASY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bifunctional coenzyme A synthase
translation: MPTSLRYRGAPPPAPVLLRALAALYSAAAAHRGLDVRVLLGHGHRLAEPPRVLLADGGGGDEDPVSFGLRQLAAAAYGCPPGLPTLLLGGPDGPRVAPEGTEGELPAYPDVVVGGTFDRLHGAHRLLLSACCLLARRRLLVGVADGELLRHKVLKELIEPYELRAAKLREFLADVQPRVLYDIVPLGDPYGPAVTDPELRCIVVSEETRKGGEAVNKKRLENGLAALELFEIQLIKDPEHGRNEEEKISSSSLRQRLLGTLLRPPREAPTLPPRPYVIGLTGGTGSGKTSIARLLGQLGAFLIDADKLGHAVYLPGGPAYERVLAAFGTEILSEDGTINRKVLGAKVFGNQERLKSLTDIVWPEIARLVRKEIGEADAQGKAVCVLDAAVLLEAGWQEMVHEVWTAVIPEEEAVKRIMDRDGLSQEAARSRLWSQMSDSQRVEQSQVVLCTLWEPEVTRKQVEKAWELLQQRLSHAPAAGSPSR
SIO_010081: COASY
subclass of: SO_0000673
so part of: COASY
location: complement(join(980423..980494,980925..981071,981148..981245,981636..981720,982208..982272,982565..982754,983215..983346,983428..983642,984046..984468,984691..984718))
location: region:980423-984718:-1
so has part: feature:984691-984718:-1:exon
so has part: feature:984046-984468:-1:exon
so has part: feature:983428-983642:-1:exon
so has part: feature:983215-983346:-1:exon
so has part: feature:982565-982754:-1:exon
so has part: feature:982208-982272:-1:exon
so has part: feature:981636-981720:-1:exon
so has part: feature:981148-981245:-1:exon
so has part: feature:980925-981071:-1:exon
so has part: feature:980423-980494:-1:exon

XP_032058396.1
type: Protein
SIO_000068: ncbiprotein

position:980423:-1
position: 980423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:984691-984718:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:984046-984468:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:983428-983642:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:983215-983346:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:982565-982754:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:982208-982272:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:981636-981720:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:981148-981245:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:980925-981071:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:980423-980494:-1:exon

HSD17B1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: HSD17B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(985269..986963)
location: region:985269-986963:-1
so has part: feature:985269-986963:-1:exon
subclass of: SO_0000010

116498586
type: Gene
SIO_000068: ncbigene

position:985269:-1
position: 985269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986963:-1
position: 986963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:985269-986963:-1:exon

HSD17B1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: HSD17B1
product: hydroxysteroid 17-beta dehydrogenase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_032202921.1
SIO_010081: HSD17B1
subclass of: SO_0000673
so part of: HSD17B1
location: complement(join(985269..985439,985694..985877,985968..986061,986146..986325,986545..986706,986864..986963))
location: region:985269-986963:-1
so has part: feature:986864-986963:-1:exon
so has part: feature:986545-986706:-1:exon
so has part: feature:986146-986325:-1:exon
so has part: feature:985968-986061:-1:exon
so has part: feature:985694-985877:-1:exon
so has part: feature:985269-985439:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:986864-986963:-1:exon

position:986864:-1
position: 986864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:986545-986706:-1:exon

position:986545:-1
position: 986545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986706:-1
position: 986706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:986146-986325:-1:exon

position:986146:-1
position: 986146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986325:-1
position: 986325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:985968-986061:-1:exon

position:985968:-1
position: 985968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986061:-1
position: 986061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:985694-985877:-1:exon

position:985694:-1
position: 985694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:985877:-1
position: 985877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:985269-985439:-1:exon

position:985439:-1
position: 985439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HSD17B1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: HSD17B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: estradiol 17-beta-dehydrogenase 1
translation: MEQTTVLITGCSSGIGLGLAARLAADSARRFKVFATMRDLAKSERLRERFGGGCPETLELLQLDVTDPRSLAAAAQRVQGQRLDVLVCNAGVGLMGPLETCSEQAMRTVFEVNLFGAIRTIQAFLPAMKRRRAGRIMVTGSIGGLQGVPFNSVYCASKFAVEGLCESLAIVLRPFNIHVTLVECGPVNTGFLQNLQRADPEGSELQGLDHDTRSLYRRYLRHCHGLFRDAAQEVEEVLQVFLEAISTPCPPLRCATTQLFAPLARLKLASPDGSDYVRAMHDFVFGPGDDGGDQP
SIO_010081: HSD17B1
subclass of: SO_0000673
so part of: HSD17B1
location: complement(join(985269..985439,985694..985877,985968..986061,986146..986325,986545..986706,986864..986960))
location: region:985269-986960:-1
so has part: feature:986864-986960:-1:exon
so has part: feature:986545-986706:-1:exon
so has part: feature:986146-986325:-1:exon
so has part: feature:985968-986061:-1:exon
so has part: feature:985694-985877:-1:exon
so has part: feature:985269-985439:-1:exon

XP_032058812.1
type: Protein
SIO_000068: ncbiprotein

position:986960:-1
position: 986960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:986864-986960:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:986545-986706:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:986146-986325:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:985968-986061:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:985694-985877:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:985269-985439:-1:exon

NAGLU
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: NAGLU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(987830..991559)
location: region:987830-991559:-1
so has part: feature:987830-991559:-1:exon
subclass of: SO_0000010

116498496
type: Gene
SIO_000068: ncbigene

position:987830:-1
position: 987830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991559:-1
position: 991559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:987830-991559:-1:exon

NAGLU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: NAGLU
product: N-acetyl-alpha-glucosaminidase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032202796.1
SIO_010081: NAGLU
subclass of: SO_0000673
so part of: NAGLU
location: complement(join(987830..989297,989396..989652,989817..989902,990047..990193,990278..990425,991171..991559))
location: region:987830-991559:-1
so has part: feature:991171-991559:-1:exon
so has part: feature:990278-990425:-1:exon
so has part: feature:990047-990193:-1:exon
so has part: feature:989817-989902:-1:exon
so has part: feature:989396-989652:-1:exon
so has part: feature:987830-989297:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:991171-991559:-1:exon

position:991171:-1
position: 991171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:990278-990425:-1:exon

position:990278:-1
position: 990278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:990425:-1
position: 990425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:990047-990193:-1:exon

position:990047:-1
position: 990047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:990193:-1
position: 990193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:989817-989902:-1:exon

position:989817:-1
position: 989817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:989902:-1
position: 989902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:989396-989652:-1:exon

position:989396:-1
position: 989396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:989652:-1
position: 989652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:987830-989297:-1:exon

position:989297:-1
position: 989297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NAGLU
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: NAGLU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-N-acetylglucosaminidase
translation: MAGPLRVAALAALLAVPVRAPVPVPERRQEAAVRALARRLLGPRAASAVALSVDGRLAAGGPDAYRLLSPPGAAVAVAVTGSSGVAAAAGLYRYLRDFCGCHLSWAGAQLRLPEPLPRVPAEIRAATPNRYRYYQNVCTQSYSYAWWDWARWEREIDWMALSGINLALAFMGQELVWQRVYLSLGLNQSEIDAYFTGPAFLAWNRLGNLHGWAGPLPRSWHLKQLYLQYRVVERMRSLGMITVLPAFAGHVPQGVLRVFPRVNATRLGGWSHFNCTYSCPYLLDPEDPMFQVIGTLFLKELIKEFGTDHIYSADTFNEMSPLSSDPAYLSRVSNAVFRSMTGADPEALWLMQGWLFQHQPDFWQPAQVRALLHGVPLGRMIVLDLFAESKPVYPWTESFYGQPFIWCMLHNFGGNHGLFGTVESINRGPFEARRFPNSTMVGTGLAPEGIEQNDVVYELMNELGWRHEPLDLPSWVSRYAQRRYGAANAAASSAWRLLLRSAYNCTGVCVNHNHSPLVRRPSLHMDTQLWYNASDVYEAWRLLLSAGTALGSSLTYRYDLVDVTRQAVQQLVADYYLSIRGAFQSRALPELLTAGGVLVYDLLPELDSLLSSHRLFLLGRWLESARAAATSDREAELYEMNARNQLTLWGPSGNILDYANKQLGGLVLDYYGVRWSLFVSLLVESLNSGSPFHQEQFNQAVFQVERGFIYNKKRYPTAPVGDALEISRKLFLKYYPGAMKRSQAGPA
SIO_010081: NAGLU
subclass of: SO_0000673
so part of: NAGLU
location: complement(join(988081..989297,989396..989652,989817..989902,990047..990193,990278..990425,991171..991559))
location: region:988081-991559:-1
so has part: feature:991171-991559:-1:exon
so has part: feature:990278-990425:-1:exon
so has part: feature:990047-990193:-1:exon
so has part: feature:989817-989902:-1:exon
so has part: feature:989396-989652:-1:exon
so has part: feature:988081-989297:-1:exon

XP_032058687.1
type: Protein
SIO_000068: ncbiprotein

position:988081:-1
position: 988081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:991171-991559:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:990278-990425:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:990047-990193:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:989817-989902:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:989396-989652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:988081-989297:-1:exon

RETREG3
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: RETREG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(993103..1001905)
location: region:993103-1001905:-1
so has part: feature:993103-1001905:-1:exon
subclass of: SO_0000010

116498564
type: Gene
SIO_000068: ncbigene

position:993103:-1
position: 993103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1001905:-1
position: 1001905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:993103-1001905:-1:exon

RETREG3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: RETREG3
product: reticulophagy regulator family member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202891.1
SIO_010081: RETREG3
subclass of: SO_0000673
so part of: RETREG3
location: complement(join(993103..994934,995551..995683,995889..995968,996462..996599,997047..997131,997812..997938,999082..999112,1000677..1000783,1001709..1001905))
location: region:993103-1001905:-1
so has part: feature:1001709-1001905:-1:exon
so has part: feature:1000677-1000783:-1:exon
so has part: feature:999082-999112:-1:exon
so has part: feature:997812-997938:-1:exon
so has part: feature:997047-997131:-1:exon
so has part: feature:996462-996599:-1:exon
so has part: feature:995889-995968:-1:exon
so has part: feature:995551-995683:-1:exon
so has part: feature:993103-994934:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1001709-1001905:-1:exon

position:1001709:-1
position: 1001709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1000677-1000783:-1:exon

position:1000677:-1
position: 1000677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1000783:-1
position: 1000783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:999082-999112:-1:exon

position:999082:-1
position: 999082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:999112:-1
position: 999112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:997812-997938:-1:exon

position:997812:-1
position: 997812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:997938:-1
position: 997938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:997047-997131:-1:exon

position:997047:-1
position: 997047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:997131:-1
position: 997131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:996462-996599:-1:exon

position:996462:-1
position: 996462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996599:-1
position: 996599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:995889-995968:-1:exon

position:995889:-1
position: 995889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:995968:-1
position: 995968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:995551-995683:-1:exon

position:995551:-1
position: 995551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:995683:-1
position: 995683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:993103-994934:-1:exon

position:994934:-1
position: 994934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RETREG3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: RETREG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulophagy regulator 3
translation: MAARPGGAGERRRRVEELSAALRGRLGPYEPLLGALQAALVWERPGRSALWWVAAHGLFWFFALTSLRLVFLVAFTLIVVVCIDKWKNKIWPEIGVARPGDLDNESWGYVHPRLLGVPELCHHLAEGWVTWTNFFNNLFVFKRQSPGKFCLLVCGVFTFLAVLGRYIPGLLLSYLLLLFVLLWPLAVYHRLGHRMYLKLEPALQRLDFSVRGYMISKQREKQLRHRSLNQEGTDDGSDSEEELAAFCPKLDDSVVAKELTISDSEHSDAEVSYTENGMFNLSRGQTPLTEGSEDLDGHSDPEESFARDLPDFPSINPEATGLDDEDDTSIGIPSLAYRPQGTEELHFPYYQEEAGALPSVQNLTNNIAGFVTRGMIQLALSGAAQPGSSHSDNPQRGAKTYLRTASSDLDTDAEGDDFELLDQSELNQLDPAGSRGQ
SIO_010081: RETREG3
subclass of: SO_0000673
so part of: RETREG3
location: complement(join(994501..994934,995551..995683,995889..995968,996462..996599,997047..997131,997812..997938,999082..999112,1000677..1000783,1001709..1001887))
location: region:994501-1001887:-1
so has part: feature:1001709-1001887:-1:exon
so has part: feature:1000677-1000783:-1:exon
so has part: feature:999082-999112:-1:exon
so has part: feature:997812-997938:-1:exon
so has part: feature:997047-997131:-1:exon
so has part: feature:996462-996599:-1:exon
so has part: feature:995889-995968:-1:exon
so has part: feature:995551-995683:-1:exon
so has part: feature:994501-994934:-1:exon

XP_032058782.1
type: Protein
SIO_000068: ncbiprotein

position:994501:-1
position: 994501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1001887:-1
position: 1001887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1001709-1001887:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1000677-1000783:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:999082-999112:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:997812-997938:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:997047-997131:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:996462-996599:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:995889-995968:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:995551-995683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:994501-994934:-1:exon

TUBG1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TUBG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1002154..1009571
location: region:1002154-1009571:1
so has part: feature:1002154-1009571:1:exon
subclass of: SO_0000010

116498603
type: Gene
SIO_000068: ncbigene

position:1002154:1
position: 1002154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1009571:1
position: 1009571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1002154-1009571:1:exon

TUBG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: TUBG1
product: tubulin gamma 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202953.1
SIO_010081: TUBG1
subclass of: SO_0000673
so part of: TUBG1
location: join(1002154..1002226,1002674..1002786,1003304..1003471,1003684..1003752,1004694..1004773,1005385..1005511,1006160..1006246,1006476..1006625,1007871..1008023,1008314..1008475,1008884..1009571)
location: region:1002154-1009571:1
so has part: feature:1002154-1002226:1:exon
so has part: feature:1002674-1002786:1:exon
so has part: feature:1003304-1003471:1:exon
so has part: feature:1003684-1003752:1:exon
so has part: feature:1004694-1004773:1:exon
so has part: feature:1005385-1005511:1:exon
so has part: feature:1006160-1006246:1:exon
so has part: feature:1006476-1006625:1:exon
so has part: feature:1007871-1008023:1:exon
so has part: feature:1008314-1008475:1:exon
so has part: feature:1008884-1009571:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1002154-1002226:1:exon

position:1002226:1
position: 1002226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1002674-1002786:1:exon

position:1002674:1
position: 1002674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1002786:1
position: 1002786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1003304-1003471:1:exon

position:1003304:1
position: 1003304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003471:1
position: 1003471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1003684-1003752:1:exon

position:1003684:1
position: 1003684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003752:1
position: 1003752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1004694-1004773:1:exon

position:1004694:1
position: 1004694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1004773:1
position: 1004773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1005385-1005511:1:exon

position:1005385:1
position: 1005385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1005511:1
position: 1005511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1006160-1006246:1:exon

position:1006160:1
position: 1006160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1006246:1
position: 1006246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1006476-1006625:1:exon

position:1006476:1
position: 1006476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1006625:1
position: 1006625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1007871-1008023:1:exon

position:1007871:1
position: 1007871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1008023:1
position: 1008023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1008314-1008475:1:exon

position:1008314:1
position: 1008314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1008475:1
position: 1008475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1008884-1009571:1:exon

position:1008884:1
position: 1008884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TUBG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: TUBG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin gamma-1 chain
translation: MPREIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSPYANLYNPENIYLSEHGGGAGNNWASGFSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVETYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTNISSLFERTCRQYDKLRKREAFLEQFRKEDIFKDNFDELDNSREIVQQLIDEYHAATRPDYISWGTQEQ
SIO_010081: TUBG1
subclass of: SO_0000673
so part of: TUBG1
location: join(1002178..1002226,1002674..1002786,1003304..1003471,1003684..1003752,1004694..1004773,1005385..1005511,1006160..1006246,1006476..1006625,1007871..1008023,1008314..1008475,1008884..1009081)
location: region:1002178-1009081:1
so has part: feature:1002178-1002226:1:exon
so has part: feature:1002674-1002786:1:exon
so has part: feature:1003304-1003471:1:exon
so has part: feature:1003684-1003752:1:exon
so has part: feature:1004694-1004773:1:exon
so has part: feature:1005385-1005511:1:exon
so has part: feature:1006160-1006246:1:exon
so has part: feature:1006476-1006625:1:exon
so has part: feature:1007871-1008023:1:exon
so has part: feature:1008314-1008475:1:exon
so has part: feature:1008884-1009081:1:exon

XP_032058844.1
type: Protein
SIO_000068: ncbiprotein

position:1002178:1
position: 1002178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1009081:1
position: 1009081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1002178-1002226:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1002674-1002786:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1003304-1003471:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1003684-1003752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1004694-1004773:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1005385-1005511:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1006160-1006246:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1006476-1006625:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1007871-1008023:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1008314-1008475:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1008884-1009081:1:exon

PLEKHH3
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: PLEKHH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1010671..1018589)
location: region:1010671-1018589:-1
so has part: feature:1010671-1018589:-1:exon
subclass of: SO_0000010

116498488
type: Gene
SIO_000068: ncbigene

position:1010671:-1
position: 1010671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1018589:-1
position: 1018589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010671-1018589:-1:exon

PLEKHH3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: PLEKHH3
product: pleckstrin homology, MyTH4 and FERM domain containing H3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032202786.1
SIO_010081: PLEKHH3
subclass of: SO_0000673
so part of: PLEKHH3
location: complement(join(1010671..1011411,1011552..1011743,1011819..1012271,1012457..1012577,1012713..1012849,1013040..1013247,1013352..1013649,1013876..1013999,1014094..1014251,1014360..1014554,1014734..1014822,1015449..1015504,1018443..1018589))
location: region:1010671-1018589:-1
so has part: feature:1018443-1018589:-1:exon
so has part: feature:1015449-1015504:-1:exon
so has part: feature:1014734-1014822:-1:exon
so has part: feature:1014360-1014554:-1:exon
so has part: feature:1014094-1014251:-1:exon
so has part: feature:1013876-1013999:-1:exon
so has part: feature:1013352-1013649:-1:exon
so has part: feature:1013040-1013247:-1:exon
so has part: feature:1012713-1012849:-1:exon
so has part: feature:1012457-1012577:-1:exon
so has part: feature:1011819-1012271:-1:exon
so has part: feature:1011552-1011743:-1:exon
so has part: feature:1010671-1011411:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1018443-1018589:-1:exon

position:1018443:-1
position: 1018443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1015449-1015504:-1:exon

position:1015449:-1
position: 1015449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1015504:-1
position: 1015504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1014734-1014822:-1:exon

position:1014734:-1
position: 1014734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1014822:-1
position: 1014822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1014360-1014554:-1:exon

position:1014360:-1
position: 1014360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1014554:-1
position: 1014554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1014094-1014251:-1:exon

position:1014094:-1
position: 1014094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1014251:-1
position: 1014251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1013876-1013999:-1:exon

position:1013876:-1
position: 1013876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1013999:-1
position: 1013999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1013352-1013649:-1:exon

position:1013352:-1
position: 1013352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1013649:-1
position: 1013649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1013040-1013247:-1:exon

position:1013040:-1
position: 1013040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1013247:-1
position: 1013247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1012713-1012849:-1:exon

position:1012713:-1
position: 1012713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1012849:-1
position: 1012849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1012457-1012577:-1:exon

position:1012457:-1
position: 1012457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1012577:-1
position: 1012577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1011819-1012271:-1:exon

position:1011819:-1
position: 1011819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1012271:-1
position: 1012271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1011552-1011743:-1:exon

position:1011552:-1
position: 1011552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1011743:-1
position: 1011743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1010671-1011411:-1:exon

position:1011411:-1
position: 1011411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLEKHH3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: PLEKHH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family H member 3
translation: MPFPGGLWWLLCCRQGFTLLRRDYGDADREADGEAEEEASFELRAQGDQASLEVSLSQPTRTSSGSERSLLVSEEMRSLIVEKGPGPVEEDPDALVKGWLQREVRGGVKTPWIRPRKYWFVLTPDSLDYYSSNEKGAKRLGSLVLTSLCSVLWPDKQTYKETGYWSVTVFGRKHCYRLYSEHLNEAVRWVCAVQKVIDSKAPVQTPTQLLMRDVEEHCGSPEVLEQIYRCNPILRYTSSPLYAPLLPFPYGSLDQSAPGPRSYTTLRDEAVKLFNSLQQLESQRDPVPLIQGILQTCLDLPPLVDEIYCQLVKQTTEPPAPGGPGDLHYWQLLTCMSCTFLPSPPVLRFLRFHLDRTESRFPASEMAKYACFIREALGKTRGRECVPSLEEILVLMRRQEMVCTVHCPGAAACSVAISSHTTAEEVARELVSRLGLSQSPNLFALYEQSRLREQPVGSSTLLADVLTRFENLAGEEREQDAPCRLCFKHYGFLDTDNVPRDSLEFALLFEQAHEMVLRGYVPTSEETLQTLAALRLQSLNSDFSTHAPFPRLEELFPPHVLHARLPAPRPDPPPPKCRGARLRAGLLAGGLWGHSLAKQRAERDQRLRGRLREEGASTMAAIVEKWKLLQGMGRPEAMAAYVALVREWPGFGSTLFDVDLRASPVGAGPQRLWLGIGAKAVSLYKPGEPEPLDSFCYGRISSFGASDSSTFRLSVEDRDLLFETSQVDEIAQLLTTYLASTAARRPPQEPTPGPPPLDPDPAALPRGLCPVAGPWQRPPPTGSFGS
SIO_010081: PLEKHH3
subclass of: SO_0000673
so part of: PLEKHH3
location: complement(join(1011229..1011411,1011552..1011743,1011819..1012271,1012457..1012577,1012713..1012849,1013040..1013247,1013352..1013649,1013876..1013999,1014094..1014251,1014360..1014554,1014734..1014822,1015449..1015504,1018443..1018589))
location: region:1011229-1018589:-1
so has part: feature:1018443-1018589:-1:exon
so has part: feature:1015449-1015504:-1:exon
so has part: feature:1014734-1014822:-1:exon
so has part: feature:1014360-1014554:-1:exon
so has part: feature:1014094-1014251:-1:exon
so has part: feature:1013876-1013999:-1:exon
so has part: feature:1013352-1013649:-1:exon
so has part: feature:1013040-1013247:-1:exon
so has part: feature:1012713-1012849:-1:exon
so has part: feature:1012457-1012577:-1:exon
so has part: feature:1011819-1012271:-1:exon
so has part: feature:1011552-1011743:-1:exon
so has part: feature:1011229-1011411:-1:exon

XP_032058677.1
type: Protein
SIO_000068: ncbiprotein

position:1011229:-1
position: 1011229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1018443-1018589:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1015449-1015504:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1014734-1014822:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1014360-1014554:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1014094-1014251:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1013876-1013999:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1013352-1013649:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1013040-1013247:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1012713-1012849:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1012457-1012577:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1011819-1012271:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1011552-1011743:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1011229-1011411:-1:exon

CCR10
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: CCR10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1021130..1022191)
location: region:1021130-1022191:-1
so has part: feature:1021130-1022191:-1:exon
subclass of: SO_0000010

116498261
type: Gene
SIO_000068: ncbigene

position:1021130:-1
position: 1021130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022191:-1
position: 1022191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1021130-1022191:-1:exon

CCR10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: CCR10
product: C-C motif chemokine receptor 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
transcript id: XM_032202506.1
SIO_010081: CCR10
subclass of: SO_0000673
so part of: CCR10
location: complement(1021130..1022191)
location: region:1021130-1022191:-1
so has part: feature:1021130-1022191:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1021130-1022191:-1:exon

CCR10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: CCR10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-C chemokine receptor type 10
translation: METAATTDFYSWEYDPAWDDGMLPELCEKQEVQGFARTYQPAVYLLLLLLGTVGNGLVLLTHTRYRRAHSVTDVCLLHLALSDLLLLLTLPFAVTVTLQGWAPGTAACRALQGIYALNFYGGFLFLTCISVDRYVAIVRVPAACRLRPRARRHGWLTAGLAWLLATLLALPQFIYGRAEQHQDLRICRVVFPPAVSRAARGATNLAQVVLGFAVPFLVMASCYAAVARTLLAARGTQPHRALRVLLALVLVFVALQLPHSLMVLLDTAELLASWEVSCAQSRRKDLALLITGGLAYLRCCLNPLLYAFLGQRFRRELWLLASDAGCVGPIDPRCPGCPSPRRRSSLSTCQDVA
SIO_010081: CCR10
subclass of: SO_0000673
so part of: CCR10
location: complement(1021130..1022191)
location: region:1021130-1022191:-1
so has part: feature:1021130-1022191:-1:exon

XP_032058397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1021130-1022191:-1:exon

CNTNAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: CNTNAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1026461..1036068
location: region:1026461-1036068:1
so has part: feature:1026461-1036068:1:exon
subclass of: SO_0000010

116498385
type: Gene
SIO_000068: ncbigene

position:1026461:1
position: 1026461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1036068:1
position: 1036068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1026461-1036068:1:exon

CNTNAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: CNTNAP1
product: contactin associated protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202635.1
SIO_010081: CNTNAP1
subclass of: SO_0000673
so part of: CNTNAP1
location: join(1026461..1026599,1028377..1028478,1028707..1028900,1029006..1029153,1029399..1029602,1029691..1029875,1029964..1030107,1030490..1030751,1030838..1030987,1031071..1031242,1031308..1031414,1031513..1031632,1031750..1031953,1032040..1032196,1032283..1032410,1032800..1032967,1033041..1033259,1033342..1033581,1033668..1033904,1034005..1034132,1034219..1034312,1034405..1034638,1034779..1034826,1034936..1036068)
location: region:1026461-1036068:1
so has part: feature:1026461-1026599:1:exon
so has part: feature:1028377-1028478:1:exon
so has part: feature:1028707-1028900:1:exon
so has part: feature:1029006-1029153:1:exon
so has part: feature:1029399-1029602:1:exon
so has part: feature:1029691-1029875:1:exon
so has part: feature:1029964-1030107:1:exon
so has part: feature:1030490-1030751:1:exon
so has part: feature:1030838-1030987:1:exon
so has part: feature:1031071-1031242:1:exon
so has part: feature:1031308-1031414:1:exon
so has part: feature:1031513-1031632:1:exon
so has part: feature:1031750-1031953:1:exon
so has part: feature:1032040-1032196:1:exon
so has part: feature:1032283-1032410:1:exon
so has part: feature:1032800-1032967:1:exon
so has part: feature:1033041-1033259:1:exon
so has part: feature:1033342-1033581:1:exon
so has part: feature:1033668-1033904:1:exon
so has part: feature:1034005-1034132:1:exon
so has part: feature:1034219-1034312:1:exon
so has part: feature:1034405-1034638:1:exon
so has part: feature:1034779-1034826:1:exon
so has part: feature:1034936-1036068:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1026461-1026599:1:exon

position:1026599:1
position: 1026599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1028377-1028478:1:exon

position:1028377:1
position: 1028377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1028478:1
position: 1028478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1028707-1028900:1:exon

position:1028707:1
position: 1028707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1028900:1
position: 1028900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1029006-1029153:1:exon

position:1029006:1
position: 1029006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029153:1
position: 1029153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1029399-1029602:1:exon

position:1029399:1
position: 1029399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029602:1
position: 1029602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1029691-1029875:1:exon

position:1029691:1
position: 1029691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029875:1
position: 1029875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1029964-1030107:1:exon

position:1029964:1
position: 1029964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030107:1
position: 1030107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1030490-1030751:1:exon

position:1030490:1
position: 1030490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030751:1
position: 1030751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1030838-1030987:1:exon

position:1030838:1
position: 1030838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030987:1
position: 1030987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1031071-1031242:1:exon

position:1031071:1
position: 1031071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031242:1
position: 1031242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1031308-1031414:1:exon

position:1031308:1
position: 1031308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031414:1
position: 1031414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1031513-1031632:1:exon

position:1031513:1
position: 1031513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031632:1
position: 1031632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1031750-1031953:1:exon

position:1031750:1
position: 1031750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031953:1
position: 1031953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1032040-1032196:1:exon

position:1032040:1
position: 1032040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1032196:1
position: 1032196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1032283-1032410:1:exon

position:1032283:1
position: 1032283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1032410:1
position: 1032410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1032800-1032967:1:exon

position:1032800:1
position: 1032800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1032967:1
position: 1032967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1033041-1033259:1:exon

position:1033041:1
position: 1033041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033259:1
position: 1033259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1033342-1033581:1:exon

position:1033342:1
position: 1033342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033581:1
position: 1033581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1033668-1033904:1:exon

position:1033668:1
position: 1033668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033904:1
position: 1033904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1034005-1034132:1:exon

position:1034005:1
position: 1034005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034132:1
position: 1034132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1034219-1034312:1:exon

position:1034219:1
position: 1034219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034312:1
position: 1034312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1034405-1034638:1:exon

position:1034405:1
position: 1034405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034638:1
position: 1034638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1034779-1034826:1:exon

position:1034779:1
position: 1034779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034826:1
position: 1034826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1034936-1036068:1:exon

position:1034936:1
position: 1034936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CNTNAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: CNTNAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: contactin-associated protein 1
translation: MGVRRLLGLLLAACASFLLPGPGCLARPCYDELVAPLYSSSIGASSRYNIFYSASFARLHSTSGWSPDPRDKQPWLQIDLMQKHRINAVATQGTFNTYDWLTRYIVLYGDHPTSWKPFFQQGSNWTFFGNVNESGVVRHDLHYPILARYIRIIPVAWNPRGKIGLRLGLYGCPYRSHVLYFDGDDAISYRFRAKKISTMEDDISFNFKTVEQDGVLMHGEGSQGDYITVELKQAQLFLHISLGSSPVHATEGHTTVAVGSLLDDQHWHSLHIERYGHHVNLTLDGEVKRFRCHGTFEHLDLETELFFGGVIDQDKQHLTYRQNFRGCVENIIFNGVNIADLARHRRSNIRFEGSVGHYCQDQVNTPITFAGINNYVQVPGIPRRNRLAVSFRFRSWDMAGLLLYTSFADRLGSLEMVLSQGQINVSIAQPGKKKLEFAAGHRLNDGFWHSVQLVAREGSAVVTIDDDDGAEFRVAHPFQLRTGSQYFFGGCPKPASLTGCRSNQTAFHGCLQMLSVDMQPVDLEMLVQHRLGKYADVFFNVCGITDRCTPNLCEHDSRCVQSWDDFMCICDLTGYKGETCHKSLYKESCDAYRVSGKTSGNYTIDPDGSGPLKPFTVYCDIREDRAWTIIRHNRHYATRVTGSSVDQPYLGAVEYWNASWAEVSALANASEYCEQRIELHCYNSRLLNTPSGLPYSFWMGRNNERHYYWGGSRPGIQRCACGLDKNCVDPQYFCNCDADHTLWRTDKGLLTFVDHLPVTQVVVGDTNRSGSEAQFLLGPLRCYGDRNTWNTVSFNRGAALLFPTFQANHSLDISFYFKTTAPSGVFLENPGTRNYVRVELNTTRDVVFAYDIGNGHENLTVRSAVPWNDDEWHQVKAELNVKLARLRVDKLPWVVRPAPPQSFVRLEFDRPLYVGAAEHKMRPFLGCLRALRMNGVTLNLEGKANETEGVRVNCTGHCQDPPVPCQNSGLCVERYSHYSCNCSISAFDGPFCNHDIGGYFEEGTWVRYNILPMSLYAAREFASIVSSPWQPLPGYNLTSEEVSFSFSTTSAPAVLLYVSSFVKDYMAVLIKDDGSLQLRYQLGTSPYVFALTTKPVTDGRPHHVNITRLHRTLYTQVDYLPVMEQQFSLFVDSKLDSPKNLYLGRVMETGVIDPEIQRYNTPGFSGCLSGVKFNSIVPLKAIFRPTSLVRPYSIRGELVESSCASMLPLTTILIPPEMDPWYMATEFPHVHDDGWIGIIIGFVTFLLLLLGGLLVLLYLYYHRYKGSYHTNEPKAIQDYGGTVKPLSVRKDQNLPQILEEAKGD
SIO_010081: CNTNAP1
subclass of: SO_0000673
so part of: CNTNAP1
location: join(1026521..1026599,1028377..1028478,1028707..1028900,1029006..1029153,1029399..1029602,1029691..1029875,1029964..1030107,1030490..1030751,1030838..1030987,1031071..1031242,1031308..1031414,1031513..1031632,1031750..1031953,1032040..1032196,1032283..1032410,1032800..1032967,1033041..1033259,1033342..1033581,1033668..1033904,1034005..1034132,1034219..1034312,1034405..1034638,1034779..1034826,1034936..1035126)
location: region:1026521-1035126:1
so has part: feature:1026521-1026599:1:exon
so has part: feature:1028377-1028478:1:exon
so has part: feature:1028707-1028900:1:exon
so has part: feature:1029006-1029153:1:exon
so has part: feature:1029399-1029602:1:exon
so has part: feature:1029691-1029875:1:exon
so has part: feature:1029964-1030107:1:exon
so has part: feature:1030490-1030751:1:exon
so has part: feature:1030838-1030987:1:exon
so has part: feature:1031071-1031242:1:exon
so has part: feature:1031308-1031414:1:exon
so has part: feature:1031513-1031632:1:exon
so has part: feature:1031750-1031953:1:exon
so has part: feature:1032040-1032196:1:exon
so has part: feature:1032283-1032410:1:exon
so has part: feature:1032800-1032967:1:exon
so has part: feature:1033041-1033259:1:exon
so has part: feature:1033342-1033581:1:exon
so has part: feature:1033668-1033904:1:exon
so has part: feature:1034005-1034132:1:exon
so has part: feature:1034219-1034312:1:exon
so has part: feature:1034405-1034638:1:exon
so has part: feature:1034779-1034826:1:exon
so has part: feature:1034936-1035126:1:exon

XP_032058526.1
type: Protein
SIO_000068: ncbiprotein

position:1026521:1
position: 1026521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1035126:1
position: 1035126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1026521-1026599:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1028377-1028478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1028707-1028900:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1029006-1029153:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1029399-1029602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1029691-1029875:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1029964-1030107:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1030490-1030751:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1030838-1030987:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1031071-1031242:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1031308-1031414:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1031513-1031632:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1031750-1031953:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1032040-1032196:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1032283-1032410:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1032800-1032967:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1033041-1033259:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1033342-1033581:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1033668-1033904:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1034005-1034132:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1034219-1034312:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1034405-1034638:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1034779-1034826:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1034936-1035126:1:exon

EZH1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: EZH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1037490..1051650)
location: region:1037490-1051650:-1
so has part: feature:1037490-1051650:-1:exon
subclass of: SO_0000010

116498539
type: Gene
SIO_000068: ncbigene

position:1037490:-1
position: 1037490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051650:-1
position: 1051650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1037490-1051650:-1:exon

EZH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: EZH1
product: enhancer of zeste 1 polycomb repressive complex 2 subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202856.1
SIO_010081: EZH1
subclass of: SO_0000673
so part of: EZH1
location: complement(join(1037490..1038366,1038483..1038567,1038718..1038798,1038928..1039009,1039508..1039603,1040207..1040385,1041339..1041464,1041900..1041940,1042485..1042576,1043039..1043235,1043742..1043916,1044498..1044589,1045410..1045573,1045840..1045942,1046842..1047015,1047663..1047783,1048855..1048974,1049216..1049344,1049949..1050069,1051599..1051650))
location: region:1037490-1051650:-1
so has part: feature:1051599-1051650:-1:exon
so has part: feature:1049949-1050069:-1:exon
so has part: feature:1049216-1049344:-1:exon
so has part: feature:1048855-1048974:-1:exon
so has part: feature:1047663-1047783:-1:exon
so has part: feature:1046842-1047015:-1:exon
so has part: feature:1045840-1045942:-1:exon
so has part: feature:1045410-1045573:-1:exon
so has part: feature:1044498-1044589:-1:exon
so has part: feature:1043742-1043916:-1:exon
so has part: feature:1043039-1043235:-1:exon
so has part: feature:1042485-1042576:-1:exon
so has part: feature:1041900-1041940:-1:exon
so has part: feature:1041339-1041464:-1:exon
so has part: feature:1040207-1040385:-1:exon
so has part: feature:1039508-1039603:-1:exon
so has part: feature:1038928-1039009:-1:exon
so has part: feature:1038718-1038798:-1:exon
so has part: feature:1038483-1038567:-1:exon
so has part: feature:1037490-1038366:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1051599-1051650:-1:exon

position:1051599:-1
position: 1051599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1049949-1050069:-1:exon

position:1049949:-1
position: 1049949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1050069:-1
position: 1050069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1049216-1049344:-1:exon

position:1049216:-1
position: 1049216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1049344:-1
position: 1049344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1048855-1048974:-1:exon

position:1048855:-1
position: 1048855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1048974:-1
position: 1048974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1047663-1047783:-1:exon

position:1047663:-1
position: 1047663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1047783:-1
position: 1047783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1046842-1047015:-1:exon

position:1046842:-1
position: 1046842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1047015:-1
position: 1047015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1045840-1045942:-1:exon

position:1045840:-1
position: 1045840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1045942:-1
position: 1045942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1045410-1045573:-1:exon

position:1045410:-1
position: 1045410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1045573:-1
position: 1045573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1044498-1044589:-1:exon

position:1044498:-1
position: 1044498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1044589:-1
position: 1044589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1043742-1043916:-1:exon

position:1043742:-1
position: 1043742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1043916:-1
position: 1043916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1043039-1043235:-1:exon

position:1043039:-1
position: 1043039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1043235:-1
position: 1043235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1042485-1042576:-1:exon

position:1042485:-1
position: 1042485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1042576:-1
position: 1042576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1041900-1041940:-1:exon

position:1041900:-1
position: 1041900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1041940:-1
position: 1041940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1041339-1041464:-1:exon

position:1041339:-1
position: 1041339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1041464:-1
position: 1041464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1040207-1040385:-1:exon

position:1040207:-1
position: 1040207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1040385:-1
position: 1040385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1039508-1039603:-1:exon

position:1039508:-1
position: 1039508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1039603:-1
position: 1039603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1038928-1039009:-1:exon

position:1038928:-1
position: 1038928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1039009:-1
position: 1039009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1038718-1038798:-1:exon

position:1038718:-1
position: 1038718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1038798:-1
position: 1038798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1038483-1038567:-1:exon

position:1038483:-1
position: 1038483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1038567:-1
position: 1038567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1037490-1038366:-1:exon

position:1038366:-1
position: 1038366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EZH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: EZH1
product: enhancer of zeste 1 polycomb repressive complex 2 subunit, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202858.1
SIO_010081: EZH1
subclass of: SO_0000673
so part of: EZH1
location: complement(join(1037490..1038366,1038483..1038567,1038718..1038798,1038928..1039009,1039508..1039603,1040207..1040385,1041339..1041464,1041900..1041940,1042485..1042576,1043039..1043235,1043742..1043916,1044498..1044589,1045410..1045573,1045840..1045942,1046842..1047015,1047663..1047783,1048855..1048974,1049216..1049344,1049949..1050069,1050278..1050606))
location: region:1037490-1050606:-1
so has part: feature:1050278-1050606:-1:exon
so has part: feature:1049949-1050069:-1:exon
so has part: feature:1049216-1049344:-1:exon
so has part: feature:1048855-1048974:-1:exon
so has part: feature:1047663-1047783:-1:exon
so has part: feature:1046842-1047015:-1:exon
so has part: feature:1045840-1045942:-1:exon
so has part: feature:1045410-1045573:-1:exon
so has part: feature:1044498-1044589:-1:exon
so has part: feature:1043742-1043916:-1:exon
so has part: feature:1043039-1043235:-1:exon
so has part: feature:1042485-1042576:-1:exon
so has part: feature:1041900-1041940:-1:exon
so has part: feature:1041339-1041464:-1:exon
so has part: feature:1040207-1040385:-1:exon
so has part: feature:1039508-1039603:-1:exon
so has part: feature:1038928-1039009:-1:exon
so has part: feature:1038718-1038798:-1:exon
so has part: feature:1038483-1038567:-1:exon
so has part: feature:1037490-1038366:-1:exon

position:1050606:-1
position: 1050606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1050278-1050606:-1:exon

position:1050278:-1
position: 1050278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1049949-1050069:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1049216-1049344:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1048855-1048974:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1047663-1047783:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1046842-1047015:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1045840-1045942:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1045410-1045573:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1044498-1044589:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1043742-1043916:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1043039-1043235:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1042485-1042576:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1041900-1041940:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1041339-1041464:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1040207-1040385:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1039508-1039603:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1038928-1039009:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1038718-1038798:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1038483-1038567:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1037490-1038366:-1:exon

EZH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: EZH1
product: enhancer of zeste 1 polycomb repressive complex 2 subunit, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032202859.1
SIO_010081: EZH1
subclass of: SO_0000673
so part of: EZH1
location: complement(join(1037490..1038366,1038483..1038567,1038718..1038798,1038928..1039009,1039508..1039603,1040207..1040385,1041339..1041464,1041900..1041940,1042485..1042576,1043039..1043235,1043742..1043916,1044498..1044589,1045410..1045573,1045840..1045942,1046842..1047015,1047663..1047783,1048855..1048974,1049216..1049344,1049949..1050069,1050333..1050458))
location: region:1037490-1050458:-1
so has part: feature:1050333-1050458:-1:exon
so has part: feature:1049949-1050069:-1:exon
so has part: feature:1049216-1049344:-1:exon
so has part: feature:1048855-1048974:-1:exon
so has part: feature:1047663-1047783:-1:exon
so has part: feature:1046842-1047015:-1:exon
so has part: feature:1045840-1045942:-1:exon
so has part: feature:1045410-1045573:-1:exon
so has part: feature:1044498-1044589:-1:exon
so has part: feature:1043742-1043916:-1:exon
so has part: feature:1043039-1043235:-1:exon
so has part: feature:1042485-1042576:-1:exon
so has part: feature:1041900-1041940:-1:exon
so has part: feature:1041339-1041464:-1:exon
so has part: feature:1040207-1040385:-1:exon
so has part: feature:1039508-1039603:-1:exon
so has part: feature:1038928-1039009:-1:exon
so has part: feature:1038718-1038798:-1:exon
so has part: feature:1038483-1038567:-1:exon
so has part: feature:1037490-1038366:-1:exon

position:1050458:-1
position: 1050458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1050333-1050458:-1:exon

position:1050333:-1
position: 1050333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1049949-1050069:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1049216-1049344:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1048855-1048974:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1047663-1047783:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1046842-1047015:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1045840-1045942:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1045410-1045573:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1044498-1044589:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1043742-1043916:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1043039-1043235:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1042485-1042576:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1041900-1041940:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1041339-1041464:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1040207-1040385:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1039508-1039603:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1038928-1039009:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1038718-1038798:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1038483-1038567:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1037490-1038366:-1:exon

EZH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: EZH1
product: enhancer of zeste 1 polycomb repressive complex 2 subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032202857.1
SIO_010081: EZH1
subclass of: SO_0000673
so part of: EZH1
location: complement(join(1037490..1038366,1038483..1038567,1038718..1038798,1038928..1039009,1039508..1039603,1040207..1040385,1041339..1041464,1041900..1041940,1042485..1042576,1043039..1043235,1043742..1043916,1044498..1044589,1045410..1045573,1045840..1045942,1046842..1047015,1047663..1047783,1048855..1048974,1049216..1049344,1049949..1050069,1050227..1050271))
location: region:1037490-1050271:-1
so has part: feature:1050227-1050271:-1:exon
so has part: feature:1049949-1050069:-1:exon
so has part: feature:1049216-1049344:-1:exon
so has part: feature:1048855-1048974:-1:exon
so has part: feature:1047663-1047783:-1:exon
so has part: feature:1046842-1047015:-1:exon
so has part: feature:1045840-1045942:-1:exon
so has part: feature:1045410-1045573:-1:exon
so has part: feature:1044498-1044589:-1:exon
so has part: feature:1043742-1043916:-1:exon
so has part: feature:1043039-1043235:-1:exon
so has part: feature:1042485-1042576:-1:exon
so has part: feature:1041900-1041940:-1:exon
so has part: feature:1041339-1041464:-1:exon
so has part: feature:1040207-1040385:-1:exon
so has part: feature:1039508-1039603:-1:exon
so has part: feature:1038928-1039009:-1:exon
so has part: feature:1038718-1038798:-1:exon
so has part: feature:1038483-1038567:-1:exon
so has part: feature:1037490-1038366:-1:exon

position:1050271:-1
position: 1050271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1050227-1050271:-1:exon

position:1050227:-1
position: 1050227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1049949-1050069:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1049216-1049344:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1048855-1048974:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1047663-1047783:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1046842-1047015:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1045840-1045942:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1045410-1045573:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1044498-1044589:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1043742-1043916:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1043039-1043235:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1042485-1042576:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1041900-1041940:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1041339-1041464:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1040207-1040385:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1039508-1039603:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1038928-1039009:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1038718-1038798:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1038483-1038567:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1037490-1038366:-1:exon

EZH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: EZH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase EZH1 isoform X1
translation: MRGAQGSAASPGAMAEEKMEIATPPTSKCIIYWKRKVKSEYMRLRQLKRFQANMGAKALFVANFAKVHEKTQILNEDWKKLRVQPVQLMKPVSGHPFLKQCTVESIFPGFPSQTLYMRTLNTVALVPIMYSWSPLQQNFMVEDETVLCNIPYMGDEVKEEDETFIEELINNYDGKVHGEEEMISGSVLISDAVFLELVNALNQYSDEEEEGHNDSEAKQEDGKEELPVTRKRKRTAAEGNKKCSKKRFPNDMIFTAISSMFPEYGFPDDMKERYRELTEVSDPNVLPPQCTPNIDGPCAKSVQREQSLHSFHTLFCRRCFKYDCFLHPFHATPNVYKRKNRETKIEPDPCGADCFLWLEGAKEFAALHNPRSKCSGRRRRRHHVVSASCSNTPALAETREGDSDRDTGNEWASSSSEANSRCQTPTKQKLSPASSQLFAVETQQEPVEWTGAEESLFRVFHGTYFNNFCSIARLLGTKTCKQVFQFAVKESLITKLPTNELMNPSQKKKRKHRLWAAHCRKIQLKKDNSPTQVYNYQPCDHPEHPCDSSCPCIMTQNFCEKFCQCNPDCQNRFPGCRCKTQCNTKQCPCYLAVRECDPDLCLTCGASEHWDCKVVSCKNCSIQRGLKKHLLLAPSDVAGWGTFIKESVQKNEFISEYCGELISQDEADRRGKVYDKYMSSFLFNLNNDFVVDATRKGNKIRFANHSVNPNCYAKVVMVNGDHRIGIFAKRAIQAGEELFFDYRYSQADALKYVGIERETDII
SIO_010081: EZH1
subclass of: SO_0000673
so part of: EZH1
location: complement(join(1038306..1038366,1038483..1038567,1038718..1038798,1038928..1039009,1039508..1039603,1040207..1040385,1041339..1041464,1041900..1041940,1042485..1042576,1043039..1043235,1043742..1043916,1044498..1044589,1045410..1045573,1045840..1045942,1046842..1047015,1047663..1047783,1048855..1048974,1049216..1049344,1049949..1050069,1051599..1051648))
location: region:1038306-1051648:-1
so has part: feature:1051599-1051648:-1:exon
so has part: feature:1049949-1050069:-1:exon
so has part: feature:1049216-1049344:-1:exon
so has part: feature:1048855-1048974:-1:exon
so has part: feature:1047663-1047783:-1:exon
so has part: feature:1046842-1047015:-1:exon
so has part: feature:1045840-1045942:-1:exon
so has part: feature:1045410-1045573:-1:exon
so has part: feature:1044498-1044589:-1:exon
so has part: feature:1043742-1043916:-1:exon
so has part: feature:1043039-1043235:-1:exon
so has part: feature:1042485-1042576:-1:exon
so has part: feature:1041900-1041940:-1:exon
so has part: feature:1041339-1041464:-1:exon
so has part: feature:1040207-1040385:-1:exon
so has part: feature:1039508-1039603:-1:exon
so has part: feature:1038928-1039009:-1:exon
so has part: feature:1038718-1038798:-1:exon
so has part: feature:1038483-1038567:-1:exon
so has part: feature:1038306-1038366:-1:exon

XP_032058747.1
type: Protein
SIO_000068: ncbiprotein

position:1038306:-1
position: 1038306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051648:-1
position: 1051648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1051599-1051648:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1049949-1050069:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1049216-1049344:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1048855-1048974:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1047663-1047783:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1046842-1047015:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1045840-1045942:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1045410-1045573:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1044498-1044589:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1043742-1043916:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1043039-1043235:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1042485-1042576:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1041900-1041940:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1041339-1041464:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1040207-1040385:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1039508-1039603:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1038928-1039009:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1038718-1038798:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1038483-1038567:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1038306-1038366:-1:exon

EZH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: EZH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase EZH1 isoform X2
translation: MEIATPPTSKCIIYWKRKVKSEYMRLRQLKRFQANMGAKALFVANFAKVHEKTQILNEDWKKLRVQPVQLMKPVSGHPFLKQCTVESIFPGFPSQTLYMRTLNTVALVPIMYSWSPLQQNFMVEDETVLCNIPYMGDEVKEEDETFIEELINNYDGKVHGEEEMISGSVLISDAVFLELVNALNQYSDEEEEGHNDSEAKQEDGKEELPVTRKRKRTAAEGNKKCSKKRFPNDMIFTAISSMFPEYGFPDDMKERYRELTEVSDPNVLPPQCTPNIDGPCAKSVQREQSLHSFHTLFCRRCFKYDCFLHPFHATPNVYKRKNRETKIEPDPCGADCFLWLEGAKEFAALHNPRSKCSGRRRRRHHVVSASCSNTPALAETREGDSDRDTGNEWASSSSEANSRCQTPTKQKLSPASSQLFAVETQQEPVEWTGAEESLFRVFHGTYFNNFCSIARLLGTKTCKQVFQFAVKESLITKLPTNELMNPSQKKKRKHRLWAAHCRKIQLKKDNSPTQVYNYQPCDHPEHPCDSSCPCIMTQNFCEKFCQCNPDCQNRFPGCRCKTQCNTKQCPCYLAVRECDPDLCLTCGASEHWDCKVVSCKNCSIQRGLKKHLLLAPSDVAGWGTFIKESVQKNEFISEYCGELISQDEADRRGKVYDKYMSSFLFNLNNDFVVDATRKGNKIRFANHSVNPNCYAKVVMVNGDHRIGIFAKRAIQAGEELFFDYRYSQADALKYVGIERETDII
SIO_010081: EZH1
subclass of: SO_0000673
so part of: EZH1
location: complement(join(1038306..1038366,1038483..1038567,1038718..1038798,1038928..1039009,1039508..1039603,1040207..1040385,1041339..1041464,1041900..1041940,1042485..1042576,1043039..1043235,1043742..1043916,1044498..1044589,1045410..1045573,1045840..1045942,1046842..1047015,1047663..1047783,1048855..1048974,1049216..1049344,1049949..1050065))
location: region:1038306-1050065:-1
so has part: feature:1049949-1050065:-1:exon
so has part: feature:1049216-1049344:-1:exon
so has part: feature:1048855-1048974:-1:exon
so has part: feature:1047663-1047783:-1:exon
so has part: feature:1046842-1047015:-1:exon
so has part: feature:1045840-1045942:-1:exon
so has part: feature:1045410-1045573:-1:exon
so has part: feature:1044498-1044589:-1:exon
so has part: feature:1043742-1043916:-1:exon
so has part: feature:1043039-1043235:-1:exon
so has part: feature:1042485-1042576:-1:exon
so has part: feature:1041900-1041940:-1:exon
so has part: feature:1041339-1041464:-1:exon
so has part: feature:1040207-1040385:-1:exon
so has part: feature:1039508-1039603:-1:exon
so has part: feature:1038928-1039009:-1:exon
so has part: feature:1038718-1038798:-1:exon
so has part: feature:1038483-1038567:-1:exon
so has part: feature:1038306-1038366:-1:exon

XP_032058748.1
type: Protein
SIO_000068: ncbiprotein

position:1050065:-1
position: 1050065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1049949-1050065:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1049216-1049344:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1048855-1048974:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1047663-1047783:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1046842-1047015:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1045840-1045942:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1045410-1045573:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1044498-1044589:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1043742-1043916:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1043039-1043235:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1042485-1042576:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1041900-1041940:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1041339-1041464:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1040207-1040385:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1039508-1039603:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1038928-1039009:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1038718-1038798:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1038483-1038567:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1038306-1038366:-1:exon

EZH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: EZH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase EZH1 isoform X2
translation: MEIATPPTSKCIIYWKRKVKSEYMRLRQLKRFQANMGAKALFVANFAKVHEKTQILNEDWKKLRVQPVQLMKPVSGHPFLKQCTVESIFPGFPSQTLYMRTLNTVALVPIMYSWSPLQQNFMVEDETVLCNIPYMGDEVKEEDETFIEELINNYDGKVHGEEEMISGSVLISDAVFLELVNALNQYSDEEEEGHNDSEAKQEDGKEELPVTRKRKRTAAEGNKKCSKKRFPNDMIFTAISSMFPEYGFPDDMKERYRELTEVSDPNVLPPQCTPNIDGPCAKSVQREQSLHSFHTLFCRRCFKYDCFLHPFHATPNVYKRKNRETKIEPDPCGADCFLWLEGAKEFAALHNPRSKCSGRRRRRHHVVSASCSNTPALAETREGDSDRDTGNEWASSSSEANSRCQTPTKQKLSPASSQLFAVETQQEPVEWTGAEESLFRVFHGTYFNNFCSIARLLGTKTCKQVFQFAVKESLITKLPTNELMNPSQKKKRKHRLWAAHCRKIQLKKDNSPTQVYNYQPCDHPEHPCDSSCPCIMTQNFCEKFCQCNPDCQNRFPGCRCKTQCNTKQCPCYLAVRECDPDLCLTCGASEHWDCKVVSCKNCSIQRGLKKHLLLAPSDVAGWGTFIKESVQKNEFISEYCGELISQDEADRRGKVYDKYMSSFLFNLNNDFVVDATRKGNKIRFANHSVNPNCYAKVVMVNGDHRIGIFAKRAIQAGEELFFDYRYSQADALKYVGIERETDII
SIO_010081: EZH1
subclass of: SO_0000673
so part of: EZH1
location: complement(join(1038306..1038366,1038483..1038567,1038718..1038798,1038928..1039009,1039508..1039603,1040207..1040385,1041339..1041464,1041900..1041940,1042485..1042576,1043039..1043235,1043742..1043916,1044498..1044589,1045410..1045573,1045840..1045942,1046842..1047015,1047663..1047783,1048855..1048974,1049216..1049344,1049949..1050065))
location: region:1038306-1050065:-1
so has part: feature:1049949-1050065:-1:exon
so has part: feature:1049216-1049344:-1:exon
so has part: feature:1048855-1048974:-1:exon
so has part: feature:1047663-1047783:-1:exon
so has part: feature:1046842-1047015:-1:exon
so has part: feature:1045840-1045942:-1:exon
so has part: feature:1045410-1045573:-1:exon
so has part: feature:1044498-1044589:-1:exon
so has part: feature:1043742-1043916:-1:exon
so has part: feature:1043039-1043235:-1:exon
so has part: feature:1042485-1042576:-1:exon
so has part: feature:1041900-1041940:-1:exon
so has part: feature:1041339-1041464:-1:exon
so has part: feature:1040207-1040385:-1:exon
so has part: feature:1039508-1039603:-1:exon
so has part: feature:1038928-1039009:-1:exon
so has part: feature:1038718-1038798:-1:exon
so has part: feature:1038483-1038567:-1:exon
so has part: feature:1038306-1038366:-1:exon

XP_032058749.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1049949-1050065:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1049216-1049344:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1048855-1048974:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1047663-1047783:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1046842-1047015:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1045840-1045942:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1045410-1045573:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1044498-1044589:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1043742-1043916:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1043039-1043235:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1042485-1042576:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1041900-1041940:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1041339-1041464:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1040207-1040385:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1039508-1039603:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1038928-1039009:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1038718-1038798:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1038483-1038567:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1038306-1038366:-1:exon

EZH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: EZH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase EZH1 isoform X2
translation: MEIATPPTSKCIIYWKRKVKSEYMRLRQLKRFQANMGAKALFVANFAKVHEKTQILNEDWKKLRVQPVQLMKPVSGHPFLKQCTVESIFPGFPSQTLYMRTLNTVALVPIMYSWSPLQQNFMVEDETVLCNIPYMGDEVKEEDETFIEELINNYDGKVHGEEEMISGSVLISDAVFLELVNALNQYSDEEEEGHNDSEAKQEDGKEELPVTRKRKRTAAEGNKKCSKKRFPNDMIFTAISSMFPEYGFPDDMKERYRELTEVSDPNVLPPQCTPNIDGPCAKSVQREQSLHSFHTLFCRRCFKYDCFLHPFHATPNVYKRKNRETKIEPDPCGADCFLWLEGAKEFAALHNPRSKCSGRRRRRHHVVSASCSNTPALAETREGDSDRDTGNEWASSSSEANSRCQTPTKQKLSPASSQLFAVETQQEPVEWTGAEESLFRVFHGTYFNNFCSIARLLGTKTCKQVFQFAVKESLITKLPTNELMNPSQKKKRKHRLWAAHCRKIQLKKDNSPTQVYNYQPCDHPEHPCDSSCPCIMTQNFCEKFCQCNPDCQNRFPGCRCKTQCNTKQCPCYLAVRECDPDLCLTCGASEHWDCKVVSCKNCSIQRGLKKHLLLAPSDVAGWGTFIKESVQKNEFISEYCGELISQDEADRRGKVYDKYMSSFLFNLNNDFVVDATRKGNKIRFANHSVNPNCYAKVVMVNGDHRIGIFAKRAIQAGEELFFDYRYSQADALKYVGIERETDII
SIO_010081: EZH1
subclass of: SO_0000673
so part of: EZH1
location: complement(join(1038306..1038366,1038483..1038567,1038718..1038798,1038928..1039009,1039508..1039603,1040207..1040385,1041339..1041464,1041900..1041940,1042485..1042576,1043039..1043235,1043742..1043916,1044498..1044589,1045410..1045573,1045840..1045942,1046842..1047015,1047663..1047783,1048855..1048974,1049216..1049344,1049949..1050065))
location: region:1038306-1050065:-1
so has part: feature:1049949-1050065:-1:exon
so has part: feature:1049216-1049344:-1:exon
so has part: feature:1048855-1048974:-1:exon
so has part: feature:1047663-1047783:-1:exon
so has part: feature:1046842-1047015:-1:exon
so has part: feature:1045840-1045942:-1:exon
so has part: feature:1045410-1045573:-1:exon
so has part: feature:1044498-1044589:-1:exon
so has part: feature:1043742-1043916:-1:exon
so has part: feature:1043039-1043235:-1:exon
so has part: feature:1042485-1042576:-1:exon
so has part: feature:1041900-1041940:-1:exon
so has part: feature:1041339-1041464:-1:exon
so has part: feature:1040207-1040385:-1:exon
so has part: feature:1039508-1039603:-1:exon
so has part: feature:1038928-1039009:-1:exon
so has part: feature:1038718-1038798:-1:exon
so has part: feature:1038483-1038567:-1:exon
so has part: feature:1038306-1038366:-1:exon

XP_032058750.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1049949-1050065:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1049216-1049344:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1048855-1048974:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1047663-1047783:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1046842-1047015:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1045840-1045942:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1045410-1045573:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1044498-1044589:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1043742-1043916:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1043039-1043235:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1042485-1042576:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1041900-1041940:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1041339-1041464:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1040207-1040385:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1039508-1039603:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1038928-1039009:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1038718-1038798:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1038483-1038567:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1038306-1038366:-1:exon

RAMP2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: RAMP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1055738..1057871
location: region:1055738-1057871:1
so has part: feature:1055738-1057871:1:exon
subclass of: SO_0000010

116498530
type: Gene
SIO_000068: ncbigene

position:1055738:1
position: 1055738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1057871:1
position: 1057871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1055738-1057871:1:exon

RAMP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: RAMP2
product: receptor activity modifying protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032202849.1
SIO_010081: RAMP2
subclass of: SO_0000673
so part of: RAMP2
location: join(1055738..1055809,1055956..1056108,1057026..1057124,1057255..1057357,1057453..1057871)
location: region:1055738-1057871:1
so has part: feature:1055738-1055809:1:exon
so has part: feature:1055956-1056108:1:exon
so has part: feature:1057026-1057124:1:exon
so has part: feature:1057255-1057357:1:exon
so has part: feature:1057453-1057871:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1055738-1055809:1:exon

position:1055809:1
position: 1055809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1055956-1056108:1:exon

position:1055956:1
position: 1055956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1056108:1
position: 1056108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1057026-1057124:1:exon

position:1057026:1
position: 1057026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1057124:1
position: 1057124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1057255-1057357:1:exon

position:1057255:1
position: 1057255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1057357:1
position: 1057357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1057453-1057871:1:exon

position:1057453:1
position: 1057453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAMP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: RAMP2
product: receptor activity modifying protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032202848.1
SIO_010081: RAMP2
subclass of: SO_0000673
so part of: RAMP2
location: join(1055739..1055809,1056028..1056108,1057026..1057124,1057255..1057357,1057453..1057871)
location: region:1055739-1057871:1
so has part: feature:1055739-1055809:1:exon
so has part: feature:1056028-1056108:1:exon
so has part: feature:1057026-1057124:1:exon
so has part: feature:1057255-1057357:1:exon
so has part: feature:1057453-1057871:1:exon

position:1055739:1
position: 1055739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1055739-1055809:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1056028-1056108:1:exon

position:1056028:1
position: 1056028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1057026-1057124:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1057255-1057357:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1057453-1057871:1:exon

RAMP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: RAMP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor activity-modifying protein 2
translation: MAPCVPTGSGRLSRGLLLLWALLGRGLCHTAGKAEGFGQEARTSPPMAKDNSTEEVYGAMAERCWEVFVDLMRNVTAPQLCDWKVISRPYSWLQACLEDSAEHLYYSYPNALAERFIFQSHHRYFHNCSVGNQVFDPPEDVLLAMVFAPICLIPFLVTVVIWRSKDGKAQP
SIO_010081: RAMP2
subclass of: SO_0000673
so part of: RAMP2
location: join(1056048..1056108,1057026..1057124,1057255..1057357,1057453..1057705)
location: region:1056048-1057705:1
so has part: feature:1056048-1056108:1:exon
so has part: feature:1057026-1057124:1:exon
so has part: feature:1057255-1057357:1:exon
so has part: feature:1057453-1057705:1:exon

XP_032058739.1
type: Protein
SIO_000068: ncbiprotein

position:1056048:1
position: 1056048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1057705:1
position: 1057705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1056048-1056108:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1057026-1057124:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1057255-1057357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1057453-1057705:1:exon

RAMP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: RAMP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor activity-modifying protein 2
translation: MAPCVPTGSGRLSRGLLLLWALLGRGLCHTAGKAEGFGQEARTSPPMAKDNSTEEVYGAMAERCWEVFVDLMRNVTAPQLCDWKVISRPYSWLQACLEDSAEHLYYSYPNALAERFIFQSHHRYFHNCSVGNQVFDPPEDVLLAMVFAPICLIPFLVTVVIWRSKDGKAQP
SIO_010081: RAMP2
subclass of: SO_0000673
so part of: RAMP2
location: join(1056048..1056108,1057026..1057124,1057255..1057357,1057453..1057705)
location: region:1056048-1057705:1
so has part: feature:1056048-1056108:1:exon
so has part: feature:1057026-1057124:1:exon
so has part: feature:1057255-1057357:1:exon
so has part: feature:1057453-1057705:1:exon

XP_032058740.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1056048-1056108:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1057026-1057124:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1057255-1057357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1057453-1057705:1:exon

VPS25
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: VPS25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1058408..1061205
location: region:1058408-1061205:1
so has part: feature:1058408-1061205:1:exon
subclass of: SO_0000010

116498462
type: Gene
SIO_000068: ncbigene

position:1058408:1
position: 1058408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1061205:1
position: 1061205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1058408-1061205:1:exon

VPS25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: VPS25
product: vacuolar protein sorting 25 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202746.1
SIO_010081: VPS25
subclass of: SO_0000673
so part of: VPS25
location: join(1058408..1058498,1058653..1058798,1059382..1059435,1059716..1059804,1060113..1060188,1060536..1061205)
location: region:1058408-1061205:1
so has part: feature:1058408-1058498:1:exon
so has part: feature:1058653-1058798:1:exon
so has part: feature:1059382-1059435:1:exon
so has part: feature:1059716-1059804:1:exon
so has part: feature:1060113-1060188:1:exon
so has part: feature:1060536-1061205:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1058408-1058498:1:exon

position:1058498:1
position: 1058498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1058653-1058798:1:exon

position:1058653:1
position: 1058653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058798:1
position: 1058798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1059382-1059435:1:exon

position:1059382:1
position: 1059382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059435:1
position: 1059435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1059716-1059804:1:exon

position:1059716:1
position: 1059716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059804:1
position: 1059804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1060113-1060188:1:exon

position:1060113:1
position: 1060113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1060188:1
position: 1060188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1060536-1061205:1:exon

position:1060536:1
position: 1060536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VPS25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: VPS25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein-sorting-associated protein 25
translation: MSFAWPWQYSFPPFFTLQPNGETRQKQLAAWCALALAYSRRHRLPAMTVREAQDSPLFANRRLQRKLPLESIQVVLEELRKNGNLEWLDKNKTSFLIMWRRPEEWGKLIYQWVSKNGLTNSVFTLYELVSGDDTADEEFHGLDEAMLLRALQALQQEHKAEIITLDDGRGVKFF
SIO_010081: VPS25
subclass of: SO_0000673
so part of: VPS25
location: join(1058452..1058498,1058653..1058798,1059382..1059435,1059716..1059804,1060113..1060188,1060536..1060648)
location: region:1058452-1060648:1
so has part: feature:1058452-1058498:1:exon
so has part: feature:1058653-1058798:1:exon
so has part: feature:1059382-1059435:1:exon
so has part: feature:1059716-1059804:1:exon
so has part: feature:1060113-1060188:1:exon
so has part: feature:1060536-1060648:1:exon

XP_032058637.1
type: Protein
SIO_000068: ncbiprotein

position:1058452:1
position: 1058452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1060648:1
position: 1060648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1058452-1058498:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1058653-1058798:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1059382-1059435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1059716-1059804:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1060113-1060188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1060536-1060648:1:exon

WNK4
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: WNK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1062494..1077820
location: region:1062494-1077820:1
so has part: feature:1062494-1077820:1:exon
subclass of: SO_0000010

116498262
type: Gene
SIO_000068: ncbigene

position:1062494:1
position: 1062494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1077820:1
position: 1077820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1062494-1077820:1:exon

WNK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: WNK4
product: WNK lysine deficient protein kinase 4
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032202507.1
SIO_010081: WNK4
subclass of: SO_0000673
so part of: WNK4
location: join(1062494..1062726,1066265..1066535,1066582..1067029,1071311..1071483,1071778..1071998,1072102..1072259,1072653..1072741,1072855..1073074,1073162..1073486,1073607..1073737,1073828..1073895,1073975..1074116,1074197..1074313,1074407..1074562,1074833..1074893,1075021..1075173,1075264..1075814,1075948..1076044,1076154..1076601,1076726..1076928,1077014..1077135,1077229..1077820)
location: region:1062494-1077820:1
so has part: feature:1062494-1062726:1:exon
so has part: feature:1066265-1066535:1:exon
so has part: feature:1066582-1067029:1:exon
so has part: feature:1071311-1071483:1:exon
so has part: feature:1071778-1071998:1:exon
so has part: feature:1072102-1072259:1:exon
so has part: feature:1072653-1072741:1:exon
so has part: feature:1072855-1073074:1:exon
so has part: feature:1073162-1073486:1:exon
so has part: feature:1073607-1073737:1:exon
so has part: feature:1073828-1073895:1:exon
so has part: feature:1073975-1074116:1:exon
so has part: feature:1074197-1074313:1:exon
so has part: feature:1074407-1074562:1:exon
so has part: feature:1074833-1074893:1:exon
so has part: feature:1075021-1075173:1:exon
so has part: feature:1075264-1075814:1:exon
so has part: feature:1075948-1076044:1:exon
so has part: feature:1076154-1076601:1:exon
so has part: feature:1076726-1076928:1:exon
so has part: feature:1077014-1077135:1:exon
so has part: feature:1077229-1077820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1062494-1062726:1:exon

position:1062726:1
position: 1062726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1066265-1066535:1:exon

position:1066265:1
position: 1066265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1066535:1
position: 1066535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1066582-1067029:1:exon

position:1066582:1
position: 1066582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1067029:1
position: 1067029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1071311-1071483:1:exon

position:1071311:1
position: 1071311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1071483:1
position: 1071483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1071778-1071998:1:exon

position:1071778:1
position: 1071778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1071998:1
position: 1071998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1072102-1072259:1:exon

position:1072102:1
position: 1072102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1072259:1
position: 1072259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1072653-1072741:1:exon

position:1072653:1
position: 1072653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1072741:1
position: 1072741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1072855-1073074:1:exon

position:1072855:1
position: 1072855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1073074:1
position: 1073074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1073162-1073486:1:exon

position:1073162:1
position: 1073162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1073486:1
position: 1073486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1073607-1073737:1:exon

position:1073607:1
position: 1073607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1073737:1
position: 1073737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1073828-1073895:1:exon

position:1073828:1
position: 1073828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1073895:1
position: 1073895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1073975-1074116:1:exon

position:1073975:1
position: 1073975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1074116:1
position: 1074116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1074197-1074313:1:exon

position:1074197:1
position: 1074197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1074313:1
position: 1074313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1074407-1074562:1:exon

position:1074407:1
position: 1074407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1074562:1
position: 1074562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1074833-1074893:1:exon

position:1074833:1
position: 1074833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1074893:1
position: 1074893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1075021-1075173:1:exon

position:1075021:1
position: 1075021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1075173:1
position: 1075173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1075264-1075814:1:exon

position:1075264:1
position: 1075264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1075814:1
position: 1075814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1075948-1076044:1:exon

position:1075948:1
position: 1075948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076044:1
position: 1076044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1076154-1076601:1:exon

position:1076154:1
position: 1076154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076601:1
position: 1076601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1076726-1076928:1:exon

position:1076726:1
position: 1076726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076928:1
position: 1076928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1077014-1077135:1:exon

position:1077014:1
position: 1077014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1077135:1
position: 1077135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1077229-1077820:1:exon

position:1077229:1
position: 1077229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WNK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: WNK4
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:1077244..1077246,aa:OTHER)
product: LOW QUALITY PROTEIN: serine/threonine-protein kinase WNK4
translation: MADVTLDKLKIKPFSFQGPPGRDSRLVFSFLLQLAQRGEEEECASPRRTLPGRAAAAFPCGFSGGEVHARGELELVVIAFPGAHPVPIPVLSPVPVPTRCPPRFPVPLPPAQRTRGGGGRPEAGSGRGGAGATGRGRSGAGAGAGARAGCSGTAPGCGAAAPGAELREPAAEPEPTATGAMSQPEAERAGGGGGGSAAEPGPPGRAPHRNRGRRPSGRDPRRASSRFNRRSSVELELLGYPPPAGGSPPPPPPPPGAAGPREPEETESEEVETRAVATSPDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQTRKLSKTERQRFSEEVEMLKGLQHPNIVRFYDSWKSSVKGQICIVLVTELMTSGTLKTYLKRFKEMKLKVLQRWSRQILKGLHFLHTRSPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEKYDEAVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTSGLKPSSFYKVKVPELKEIIEGCIRMDKDERYTIQDLLEHSFFQEDTGVHVELAEEDDGVKSGLKLWLRMDDTKKLHGKYKDNNAIEFLFELYKDVAEEVAQEMVILGFVCEADYKLVAKAVRDRVVAIKRKREKLKRARDAVPPAELGQGPGVLQLLEDFKSPLPSGVPTPAPATPGSGDSVFGNAFPPEPEEPEADQHFVYRHTSYSSATSDCETDGYLSSSGFLDSPDLSHRSASAGTPTSPPPARPVRCFPTSIAVQLPTERLPPASGFSSPVDSYASDVASGMSDGYEGLSASERSSKLPAKRAAGKLLRRRARSRLRITNISDKNDRVVECQLQTYNNKMVTFKFDLDGDNPEEIAAVMVHNEFILKSEQDGFIHRIRDIIQRVETLLRKDGRGAAELPENPEAEGGSSRPQAELQLQELSRSISSSSSLSDLGCTSPSLSLQSPVLPALSSSLSENDLSSPAEPPAPQTRGQPPVLPGSPAGSVQTWPLLSTAPSWPTAAPLFPQPPSPSTPGGAPPVPLALPPALPSSPVPSSPVSPPVTSGPWSPTTPLLSLANVFSLAVMSVAHTLLPAVSSIATSGGHLYPPLLPRPQNLVLGPPRFVYPDPASMAKPPPAHGGALGATVPAAGGAVPFSPPAPPGGEAAGSPPAPPPPSASTPGSLEGSGVPLGPPKPSHPLIVAESLPPGVPKARLSPINEEAKPQILGRFQVTPSKEPAVVASPAPGSGEGEERGTELAASGSPLPAAPGTGRSSSSSSSSSSSSESEAAVQDPEVEEALPGECTVVAAAAAAAESEREGAGEEGAEGAPQAVLSQVWLSYSRSLSYVSSDDTESEDEEIWEELQSLRQKHLAEVQLLQSSQKKEIEELYLRMGKQPPLGIVSPAAMLSSRQRRLSKGSFNPSRRNSLQRLELAQPQAQGPSVPAGIMRRNSLSGSSTGSQEQRVSKGVTFADDFGRMAAGREXLRELPQPSACCPAGGGSPPRLLGSSQRGLCRGGGQPQPFCTLPGLGWQHSAHPYVSPSAPVPSLLRSSCGREQGAGTPRSPAPRPGSPSRTQPAPCPRCTASSALLHLAVLQPRPRGTKRRLPLLGCSEPKINAGPCPKNDGTGGCGGRGEGEFCYKPTSGKRFINTNRTQSGSGCVCGGAGC
SIO_010081: WNK4
subclass of: SO_0000673
so part of: WNK4
location: join(1062494..1062726,1066265..1066535,1066582..1067029,1071311..1071483,1071778..1071998,1072102..1072259,1072653..1072741,1072855..1073074,1073162..1073486,1073607..1073737,1073828..1073895,1073975..1074116,1074197..1074313,1074407..1074562,1074833..1074893,1075021..1075173,1075264..1075814,1075948..1076044,1076154..1076601,1076726..1076928,1077014..1077135,1077229..1077798)
location: region:1062494-1077798:1
so has part: feature:1062494-1062726:1:exon
so has part: feature:1066265-1066535:1:exon
so has part: feature:1066582-1067029:1:exon
so has part: feature:1071311-1071483:1:exon
so has part: feature:1071778-1071998:1:exon
so has part: feature:1072102-1072259:1:exon
so has part: feature:1072653-1072741:1:exon
so has part: feature:1072855-1073074:1:exon
so has part: feature:1073162-1073486:1:exon
so has part: feature:1073607-1073737:1:exon
so has part: feature:1073828-1073895:1:exon
so has part: feature:1073975-1074116:1:exon
so has part: feature:1074197-1074313:1:exon
so has part: feature:1074407-1074562:1:exon
so has part: feature:1074833-1074893:1:exon
so has part: feature:1075021-1075173:1:exon
so has part: feature:1075264-1075814:1:exon
so has part: feature:1075948-1076044:1:exon
so has part: feature:1076154-1076601:1:exon
so has part: feature:1076726-1076928:1:exon
so has part: feature:1077014-1077135:1:exon
so has part: feature:1077229-1077798:1:exon

XP_032058398.1
type: Protein
SIO_000068: ncbiprotein

position:1077798:1
position: 1077798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1062494-1062726:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1066265-1066535:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1066582-1067029:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1071311-1071483:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1071778-1071998:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1072102-1072259:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072653-1072741:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1072855-1073074:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1073162-1073486:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1073607-1073737:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1073828-1073895:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1073975-1074116:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1074197-1074313:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1074407-1074562:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1074833-1074893:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1075021-1075173:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1075264-1075814:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1075948-1076044:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1076154-1076601:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1076726-1076928:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1077014-1077135:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1077229-1077798:1:exon

LOC116498392
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116498392
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1077946..1078639)
location: region:1077946-1078639:-1
so has part: feature:1077946-1078639:-1:exon
subclass of: SO_0000010

116498392
type: Gene
SIO_000068: ncbigene

position:1077946:-1
position: 1077946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1078639:-1
position: 1078639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1077946-1078639:-1:exon

LOC116498392
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116498392
product: cytochrome c oxidase assembly factor 3 homolog, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202646.1
SIO_010081: LOC116498392
subclass of: SO_0000673
so part of: LOC116498392
location: complement(join(1077946..1078332,1078438..1078639))
location: region:1077946-1078639:-1
so has part: feature:1078438-1078639:-1:exon
so has part: feature:1077946-1078332:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1078438-1078639:-1:exon

position:1078438:-1
position: 1078438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1077946-1078332:-1:exon

position:1078332:-1
position: 1078332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116498392
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116498392
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase assembly factor 3 homolog, mitochondrial
translation: MAAPREAGGEAAVAQRIDPAREPGLSPEQRRFMAQVELAQRQRALQKRLRGRNVLLALGIGAVTAGIYGYTFYSVSQERFLDELELEAEAARARASQRERSAAT
SIO_010081: LOC116498392
subclass of: SO_0000673
so part of: LOC116498392
location: complement(join(1078220..1078332,1078438..1078639))
location: region:1078220-1078639:-1
so has part: feature:1078438-1078639:-1:exon
so has part: feature:1078220-1078332:-1:exon

XP_032058537.1
type: Protein
SIO_000068: ncbiprotein

position:1078220:-1
position: 1078220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1078438-1078639:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1078220-1078332:-1:exon

CNTD1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: CNTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1079175..1083415
location: region:1079175-1083415:1
so has part: feature:1079175-1083415:1:exon
subclass of: SO_0000010

116498263
type: Gene
SIO_000068: ncbigene

position:1079175:1
position: 1079175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1083415:1
position: 1083415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1079175-1083415:1:exon

CNTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: CNTD1
product: cyclin N-terminal domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032202509.1
SIO_010081: CNTD1
subclass of: SO_0000673
so part of: CNTD1
location: join(1079175..1079340,1079444..1079519,1079722..1079890,1080394..1080556,1081014..1081158,1081551..1081647,1082254..1083415)
location: region:1079175-1083415:1
so has part: feature:1079175-1079340:1:exon
so has part: feature:1079444-1079519:1:exon
so has part: feature:1079722-1079890:1:exon
so has part: feature:1080394-1080556:1:exon
so has part: feature:1081014-1081158:1:exon
so has part: feature:1081551-1081647:1:exon
so has part: feature:1082254-1083415:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1079175-1079340:1:exon

position:1079340:1
position: 1079340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1079444-1079519:1:exon

position:1079444:1
position: 1079444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1079519:1
position: 1079519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1079722-1079890:1:exon

position:1079722:1
position: 1079722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1079890:1
position: 1079890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1080394-1080556:1:exon

position:1080394:1
position: 1080394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1080556:1
position: 1080556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1081014-1081158:1:exon

position:1081014:1
position: 1081014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1081158:1
position: 1081158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1081551-1081647:1:exon

position:1081551:1
position: 1081551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1081647:1
position: 1081647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1082254-1083415:1:exon

position:1082254:1
position: 1082254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CNTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: CNTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin N-terminal domain-containing protein 1
translation: MGSQAVPRFYSSEPLFGGVAPEVMEASLLRLAAENERYLSELPGQAGCCKDCRTVEFIFLLAEKWHLDHSARYQAVELLERFMIKQVEQICKSPSENMEGTKEGSSRSSLKEQMYDTFVLRLVSCIQLASKLSLHYNIVNSNTALKFLQSLKYSYTKQELLESELAVLETLQFQINVSTPLAYIELLLEVLGHNGCLLPAKPLHQMCVQLLDFLYLEREAIYDTLLKTAIENSTPSELQVAKFLAVKEDFMLLAVGIISTSAFVLNPEHWKQVVEHLNCITGITSQSILEFSYAVLKHVLGSTTPKQQRRK
SIO_010081: CNTD1
subclass of: SO_0000673
so part of: CNTD1
location: join(1079175..1079340,1079444..1079519,1079722..1079890,1080394..1080556,1081014..1081158,1081551..1081647,1082254..1082373)
location: region:1079175-1082373:1
so has part: feature:1079175-1079340:1:exon
so has part: feature:1079444-1079519:1:exon
so has part: feature:1079722-1079890:1:exon
so has part: feature:1080394-1080556:1:exon
so has part: feature:1081014-1081158:1:exon
so has part: feature:1081551-1081647:1:exon
so has part: feature:1082254-1082373:1:exon

XP_032058400.1
type: Protein
SIO_000068: ncbiprotein

position:1082373:1
position: 1082373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1079175-1079340:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1079444-1079519:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1079722-1079890:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1080394-1080556:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1081014-1081158:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1081551-1081647:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1082254-1082373:1:exon

BECN1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: BECN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1083084..1087211)
location: region:1083084-1087211:-1
so has part: feature:1083084-1087211:-1:exon
subclass of: SO_0000010

116498390
type: Gene
SIO_000068: ncbigene

position:1083084:-1
position: 1083084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1087211:-1
position: 1087211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1083084-1087211:-1:exon

BECN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: BECN1
product: beclin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202643.1
SIO_010081: BECN1
subclass of: SO_0000673
so part of: BECN1
location: complement(join(1083084..1083694,1083995..1084137,1084584..1084644,1084729..1084878,1085061..1085207,1085428..1085622,1085931..1086067,1086292..1086382,1086692..1086750,1086839..1086909,1087022..1087211))
location: region:1083084-1087211:-1
so has part: feature:1087022-1087211:-1:exon
so has part: feature:1086839-1086909:-1:exon
so has part: feature:1086692-1086750:-1:exon
so has part: feature:1086292-1086382:-1:exon
so has part: feature:1085931-1086067:-1:exon
so has part: feature:1085428-1085622:-1:exon
so has part: feature:1085061-1085207:-1:exon
so has part: feature:1084729-1084878:-1:exon
so has part: feature:1084584-1084644:-1:exon
so has part: feature:1083995-1084137:-1:exon
so has part: feature:1083084-1083694:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1087022-1087211:-1:exon

position:1087022:-1
position: 1087022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1086839-1086909:-1:exon

position:1086839:-1
position: 1086839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1086909:-1
position: 1086909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1086692-1086750:-1:exon

position:1086692:-1
position: 1086692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1086750:-1
position: 1086750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1086292-1086382:-1:exon

position:1086292:-1
position: 1086292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1086382:-1
position: 1086382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1085931-1086067:-1:exon

position:1085931:-1
position: 1085931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1086067:-1
position: 1086067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1085428-1085622:-1:exon

position:1085428:-1
position: 1085428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1085622:-1
position: 1085622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1085061-1085207:-1:exon

position:1085061:-1
position: 1085061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1085207:-1
position: 1085207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1084729-1084878:-1:exon

position:1084729:-1
position: 1084729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1084878:-1
position: 1084878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1084584-1084644:-1:exon

position:1084584:-1
position: 1084584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1084644:-1
position: 1084644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1083995-1084137:-1:exon

position:1083995:-1
position: 1083995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1084137:-1
position: 1084137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1083084-1083694:-1:exon

position:1083694:-1
position: 1083694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BECN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: BECN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beclin-1
translation: MEGGRAGGGGCTTQVSFVCQRCSQPLKLDTSFKILDRLTIQELTAPLLTAAPARPGDAQEEESSALSEEGFAESRQDGVSRRFIPPARMMSTESANSFTLIGEASDGGTMENLSRRLKVTGDLFDIMSGQTDVDHPLCEECTDTLLDQLDTQLNITENECQNYKRCLEILEQMNEDDKEKLQTELKELALEEEQLIQELEDVEKNRKIVAEDFERVRAEAERLEQEEAQYQKEYCEFKRQQLELDDELKSVDNQMRYAQIQLDKLKKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELPLYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSGGSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQFYNK
SIO_010081: BECN1
subclass of: SO_0000673
so part of: BECN1
location: complement(join(1083526..1083694,1083995..1084137,1084584..1084644,1084729..1084878,1085061..1085207,1085428..1085622,1085931..1086067,1086292..1086382,1086692..1086750,1086839..1086909,1087022..1087154))
location: region:1083526-1087154:-1
so has part: feature:1087022-1087154:-1:exon
so has part: feature:1086839-1086909:-1:exon
so has part: feature:1086692-1086750:-1:exon
so has part: feature:1086292-1086382:-1:exon
so has part: feature:1085931-1086067:-1:exon
so has part: feature:1085428-1085622:-1:exon
so has part: feature:1085061-1085207:-1:exon
so has part: feature:1084729-1084878:-1:exon
so has part: feature:1084584-1084644:-1:exon
so has part: feature:1083995-1084137:-1:exon
so has part: feature:1083526-1083694:-1:exon

XP_032058534.1
type: Protein
SIO_000068: ncbiprotein

position:1083526:-1
position: 1083526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1087154:-1
position: 1087154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1087022-1087154:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1086839-1086909:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1086692-1086750:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1086292-1086382:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1085931-1086067:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1085428-1085622:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1085061-1085207:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1084729-1084878:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1084584-1084644:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1083995-1084137:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1083526-1083694:-1:exon

PSME3
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: PSME3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1087495..1094455
location: region:1087495-1094455:1
so has part: feature:1087495-1094455:1:exon
subclass of: SO_0000010

116498391
type: Gene
SIO_000068: ncbigene

position:1087495:1
position: 1087495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1094455:1
position: 1094455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1087495-1094455:1:exon

PSME3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: PSME3
product: proteasome activator subunit 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202644.1
SIO_010081: PSME3
subclass of: SO_0000673
so part of: PSME3
location: join(1087495..1087614,1088761..1088793,1089097..1089159,1089656..1089760,1090036..1090084,1090704..1090816,1091331..1091399,1091631..1091698,1091851..1091905,1092153..1092239,1092680..1094455)
location: region:1087495-1094455:1
so has part: feature:1087495-1087614:1:exon
so has part: feature:1088761-1088793:1:exon
so has part: feature:1089097-1089159:1:exon
so has part: feature:1089656-1089760:1:exon
so has part: feature:1090036-1090084:1:exon
so has part: feature:1090704-1090816:1:exon
so has part: feature:1091331-1091399:1:exon
so has part: feature:1091631-1091698:1:exon
so has part: feature:1091851-1091905:1:exon
so has part: feature:1092153-1092239:1:exon
so has part: feature:1092680-1094455:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1087495-1087614:1:exon

position:1087614:1
position: 1087614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1088761-1088793:1:exon

position:1088761:1
position: 1088761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1088793:1
position: 1088793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1089097-1089159:1:exon

position:1089097:1
position: 1089097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1089159:1
position: 1089159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1089656-1089760:1:exon

position:1089656:1
position: 1089656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1089760:1
position: 1089760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1090036-1090084:1:exon

position:1090036:1
position: 1090036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1090084:1
position: 1090084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1090704-1090816:1:exon

position:1090704:1
position: 1090704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1090816:1
position: 1090816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1091331-1091399:1:exon

position:1091331:1
position: 1091331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1091399:1
position: 1091399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1091631-1091698:1:exon

position:1091631:1
position: 1091631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1091698:1
position: 1091698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1091851-1091905:1:exon

position:1091851:1
position: 1091851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1091905:1
position: 1091905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1092153-1092239:1:exon

position:1092153:1
position: 1092153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1092239:1
position: 1092239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1092680-1094455:1:exon

position:1092680:1
position: 1092680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSME3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: PSME3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome activator complex subunit 3 isoform X1
translation: MASLLKVDPEVKLKVDSFRERITSEAEDLVANFFPKKLLELDGFLKEPILNIHDLTQIHSDMNLPVPDPILLTNSHDGLDGPNMKKRKLEDREETFQGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQISRYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYVTLHDMILKNIEKIKRPRSSNAETLY
SIO_010081: PSME3
subclass of: SO_0000673
so part of: PSME3
location: join(1087573..1087614,1088761..1088793,1089097..1089159,1089656..1089760,1090036..1090084,1090704..1090816,1091331..1091399,1091631..1091698,1091851..1091905,1092153..1092239,1092680..1092760)
location: region:1087573-1092760:1
so has part: feature:1087573-1087614:1:exon
so has part: feature:1088761-1088793:1:exon
so has part: feature:1089097-1089159:1:exon
so has part: feature:1089656-1089760:1:exon
so has part: feature:1090036-1090084:1:exon
so has part: feature:1090704-1090816:1:exon
so has part: feature:1091331-1091399:1:exon
so has part: feature:1091631-1091698:1:exon
so has part: feature:1091851-1091905:1:exon
so has part: feature:1092153-1092239:1:exon
so has part: feature:1092680-1092760:1:exon

XP_032058535.1
type: Protein
SIO_000068: ncbiprotein

position:1087573:1
position: 1087573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1092760:1
position: 1092760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1087573-1087614:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1088761-1088793:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1089097-1089159:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1089656-1089760:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1090036-1090084:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1090704-1090816:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1091331-1091399:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1091631-1091698:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1091851-1091905:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1092153-1092239:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1092680-1092760:1:exon

PSME3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: PSME3
product: proteasome activator subunit 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032202645.1
SIO_010081: PSME3
subclass of: SO_0000673
so part of: PSME3
location: join(1088050..1088054,1088761..1088793,1089097..1089159,1089656..1089760,1090036..1090084,1090704..1090816,1091331..1091399,1091631..1091698,1091851..1091905,1092153..1092239,1092680..1094455)
location: region:1088050-1094455:1
so has part: feature:1088050-1088054:1:exon
so has part: feature:1088761-1088793:1:exon
so has part: feature:1089097-1089159:1:exon
so has part: feature:1089656-1089760:1:exon
so has part: feature:1090036-1090084:1:exon
so has part: feature:1090704-1090816:1:exon
so has part: feature:1091331-1091399:1:exon
so has part: feature:1091631-1091698:1:exon
so has part: feature:1091851-1091905:1:exon
so has part: feature:1092153-1092239:1:exon
so has part: feature:1092680-1094455:1:exon

position:1088050:1
position: 1088050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1088050-1088054:1:exon