Aythya fuligula isolate bAytFul2 chromosome 23, bAytFul2.pri, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Aythyinae; Aythya.
REFSEQ INFORMATION: The reference sequence is identical to\nCM020322.1.\nAssembly name: bAytFul2.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/12/31. The original whole-genome shotgun project has the\naccession WNMM00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 20-SEP-2019\nAssembly Method :: FALCON v. 2018.31.08-03.06; FALCON-Unzip\n v. 6.0.0.47841; purge_haplotigs v.\n v1.0.3+ 1.Nov.2018; scaff10x v. 4.1.0;\n Bionano Solve DLS v. 3.2.1; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishing\n & gap filling v. 6.0.0.47841; longranger\n align v. 2.2.2; freebayes Illumina\n polishing v. 1.3; gEVAL manual curation\n v. 2019-09-20; VGP assembly pipeline\n individual v. 1.5\nAssembly Name :: bAytFul2.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 64.03x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Aythya fuligula Annotation Release\n 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Patrik Ellstrom, Mahmoud Naguib, Josef Jarhult
Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 6 bases in 6 codons; deleted 6 bases in 5 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 6 bases in 6 codons; deleted 6 bases in 5 codons; substituted 3 bases at 3 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: zinc finger protein Rlf
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
leucine zipper protein 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
leucine zipper protein 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments
heterogeneous nuclear ribonucleoprotein R, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
heterogeneous nuclear ribonucleoprotein R, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
heterogeneous nuclear ribonucleoprotein R isoform X2
heterogeneous nuclear ribonucleoprotein R isoform X1
ATP synthase inhibitory factor subunit 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
DnaJ heat shock protein family (Hsp40) member C8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
EYA transcriptional coactivator and phosphatase 3, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
EYA transcriptional coactivator and phosphatase 3, transcript variant X7
EYA transcriptional coactivator and phosphatase 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
EYA transcriptional coactivator and phosphatase 3, transcript variant X6
EYA transcriptional coactivator and phosphatase 3, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
EYA transcriptional coactivator and phosphatase 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
EYA transcriptional coactivator and phosphatase 3, transcript variant X4
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: XK-related protein 8
sphingomyelin phosphodiesterase acid like 3B
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: acid sphingomyelinase-like phosphodiesterase 3b
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
thymocyte selection associated family member 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
protein phosphatase 1 regulatory subunit 8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
nuclear inhibitor of protein phosphatase 1
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00553
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Scm polycomb group protein homolog 1, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Scm polycomb group protein homolog 1, transcript variant X9
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Scm polycomb group protein homolog 1, transcript variant X8
Scm polycomb group protein homolog 1, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Scm polycomb group protein homolog 1, transcript variant X1
Scm polycomb group protein homolog 1, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Scm polycomb group protein homolog 1, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Scm polycomb group protein homolog 1, transcript variant X2
Scm polycomb group protein homolog 1, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
HIVEP zinc finger 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
HIVEP zinc finger 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
HIVEP zinc finger 3, transcript variant X5
HIVEP zinc finger 3, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
HIVEP zinc finger 3, transcript variant X4
HIVEP zinc finger 3, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
small nuclear ribonucleoprotein U5 subunit 40
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 83% coverage of the annotated genomic feature by RNAseq alignments
U5 small nuclear ribonucleoprotein 40 kDa protein
sodium/potassium transporting ATPase interacting 1
sodium/potassium-transporting ATPase subunit beta-1-interacting protein 1
pumilio RNA binding family member 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
pumilio RNA binding family member 1, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
pumilio RNA binding family member 1, transcript variant X4
pumilio RNA binding family member 1, transcript variant X5
pumilio RNA binding family member 1, transcript variant X6
pumilio RNA binding family member 1, transcript variant X2
pumilio RNA binding family member 1, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
COORDINATES: nucleotide motif:Rfam:12.0:RF00188
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
lysosomal protein transmembrane 5, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
lysosomal protein transmembrane 5, transcript variant X1
lysosomal-associated transmembrane protein 5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC116498206, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC116498206, transcript variant X2
protein tyrosine phosphatase receptor type U, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
protein tyrosine phosphatase receptor type U, transcript variant X2
protein tyrosine phosphatase receptor type U, transcript variant X3
receptor-type tyrosine-protein phosphatase U isoform X1
receptor-type tyrosine-protein phosphatase U isoform X2
receptor-type tyrosine-protein phosphatase U isoform X3
mitochondrial trans-2-enoyl-CoA reductase
enoyl-[acyl-carrier-protein] reductase, mitochondrial
serine and arginine rich splicing factor 4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
lethal(3)malignant brain tumor-like protein 4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transmembrane protein 200B, transcript variant X1
transmembrane protein 200B, transcript variant X2
erythrocyte membrane protein band 4.1, transcript variant X24
erythrocyte membrane protein band 4.1, transcript variant X18
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
erythrocyte membrane protein band 4.1, transcript variant X16
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
erythrocyte membrane protein band 4.1, transcript variant X11
erythrocyte membrane protein band 4.1, transcript variant X10
erythrocyte membrane protein band 4.1, transcript variant X17
erythrocyte membrane protein band 4.1, transcript variant X6
erythrocyte membrane protein band 4.1, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
erythrocyte membrane protein band 4.1, transcript variant X5
erythrocyte membrane protein band 4.1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
erythrocyte membrane protein band 4.1, transcript variant X4
erythrocyte membrane protein band 4.1, transcript variant X1
erythrocyte membrane protein band 4.1, transcript variant X26
erythrocyte membrane protein band 4.1, transcript variant X20
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
erythrocyte membrane protein band 4.1, transcript variant X19
erythrocyte membrane protein band 4.1, transcript variant X23
erythrocyte membrane protein band 4.1, transcript variant X9
erythrocyte membrane protein band 4.1, transcript variant X15
erythrocyte membrane protein band 4.1, transcript variant X13
erythrocyte membrane protein band 4.1, transcript variant X12
erythrocyte membrane protein band 4.1, transcript variant X14
erythrocyte membrane protein band 4.1, transcript variant X8
erythrocyte membrane protein band 4.1, transcript variant X7
erythrocyte membrane protein band 4.1, transcript variant X27
erythrocyte membrane protein band 4.1, transcript variant X25
erythrocyte membrane protein band 4.1, transcript variant X22
erythrocyte membrane protein band 4.1, transcript variant X21
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
tRNA selenocysteine 1 associated protein 1, transcript variant X2
tRNA selenocysteine 1 associated protein 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
tRNA selenocysteine 1-associated protein 1 isoform X1
tRNA selenocysteine 1-associated protein 1 isoform X2
small nucleolar RNA SNORA16B/SNORA16A family
COORDINATES: nucleotide motif:Rfam:12.0:RF00190
COORDINATES: nucleotide motif:Rfam:12.0:RF00405
COORDINATES: nucleotide motif:Rfam:12.0:RF00420
COORDINATES: nucleotide motif:Rfam:12.0:RF00608
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
TATA-box binding protein associated factor 12, transcript variant X2
TATA-box binding protein associated factor 12, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcription initiation factor TFIID subunit 12 isoform X1
transcription initiation factor TFIID subunit 12 isoform X2
COORDINATES: nucleotide motif:Rfam:12.0:RF00548
discoidin, CUB and LCCL domain-containing protein 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
glucocorticoid modulatory element binding protein 1
glucocorticoid modulatory element-binding protein 1
YTH N6-methyladenosine RNA binding protein 2
inhibitor of DNA binding 3, HLH protein, transcript variant X1
inhibitor of DNA binding 3, HLH protein, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 21% coverage of the annotated genomic feature by RNAseq alignments
ArfGAP with SH3 domain, ankyrin repeat and PH domain 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
transcription elongation factor A protein 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
COORDINATES: nucleotide motif:Rfam:12.0:RF00045
phosphatase and actin regulator 4, transcript variant X2
phosphatase and actin regulator 4, transcript variant X3
phosphatase and actin regulator 4, transcript variant X4
phosphatase and actin regulator 4, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
phosphatase and actin regulator 4 isoform X2
phosphatase and actin regulator 4 isoform X1
phosphatase and actin regulator 4 isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 53% coverage of the annotated genomic feature by RNAseq alignments
family with sequence similarity 76 member A
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
FGR proto-oncogene, Src family tyrosine kinase
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
AT-hook DNA-binding motif-containing protein 1
wiskott-Aldrich syndrome protein family member 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
CD164 molecule like 2, transcript variant X3
CD164 molecule like 2, transcript variant X1
CD164 molecule like 2, transcript variant X2
CD164 sialomucin-like 2 protein isoform X3
CD164 sialomucin-like 2 protein isoform X1
CD164 sialomucin-like 2 protein isoform X2
mitogen-activated protein kinase kinase kinase 6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 68% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 77% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
WD and tetratricopeptide repeats 1, transcript variant X3
WD and tetratricopeptide repeats 1, transcript variant X1
WD and tetratricopeptide repeats 1, transcript variant X2
WD and tetratricopeptide repeats protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
nuclear distribution C, dynein complex regulator
nuclear receptor subfamily 0 group B member 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
zinc finger DHHC-type palmitoyltransferase 18
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
phosphatidylinositol glycan anchor biosynthesis class V
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
AT-rich interaction domain 1A, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
AT-rich interaction domain 1A, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
AT-rich interactive domain-containing protein 1A isoform X2
AT-rich interactive domain-containing protein 1A isoform X1
ribosomal protein S6 kinase A1, transcript variant X2
ribosomal protein S6 kinase A1, transcript variant X1
ribosomal protein S6 kinase alpha-1 isoform X2
ribosomal protein S6 kinase alpha-1 isoform X1
high mobility group nucleosomal binding domain 2
dehydrodolichyl diphosphate synthase subunit, transcript variant X1
dehydrodolichyl diphosphate synthase subunit, transcript variant X2
dehydrodolichyl diphosphate synthase subunit, transcript variant X3
dehydrodolichyl diphosphate synthase complex subunit DHDDS
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
crystallin beta-gamma domain containing 2
beta/gamma crystallin domain-containing protein 2
SH3 domain binding glutamate rich protein like 3
SH3 domain-binding glutamic acid-rich-like protein 3
centrosomal protein 85, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
centrosomal protein 85, transcript variant X2
connector enhancer of kinase suppressor of Ras 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 4% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
uncharacterized protein C1orf232 homolog
family with sequence similarity 110 member D
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
platelet activating factor acetylhydrolase 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
platelet-activating factor acetylhydrolase 2, cytoplasmic
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
progestin and adipoQ receptor family member 7, transcript variant X1
progestin and adipoQ receptor family member 7, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
POU domain, class 3, transcription factor 1
UTP11 small subunit processome component
probable U3 small nucleolar RNA-associated protein 11
four and a half LIM domains 3, transcript variant X3
four and a half LIM domains 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
four and a half LIM domains 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
inositol polyphosphate-5-phosphatase B, transcript variant X3
inositol polyphosphate-5-phosphatase B, transcript variant X2
inositol polyphosphate-5-phosphatase B, transcript variant X1
type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X3
type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X2
type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X1
yrdC N6-threonylcarbamoyltransferase domain containing
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
yrdC domain-containing protein, mitochondrial
glycoprotein endo-alpha-1,2-mannosidase-like protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 35% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 34% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 34% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized protein C1orf109 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
dynein axonemal light intermediate chain 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments
axonemal dynein light intermediate polypeptide 1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: smad nuclear-interacting protein 1
MYST/Esa1 associated factor 6, transcript variant X1
MYST/Esa1 associated factor 6, transcript variant X2
MYST/Esa1 associated factor 6, transcript variant X3
MYST/Esa1 associated factor 6, transcript variant X6
MYST/Esa1 associated factor 6, transcript variant X7
MYST/Esa1 associated factor 6, transcript variant X4
MYST/Esa1 associated factor 6, transcript variant X5
chromatin modification-related protein MEAF6 isoform X3
chromatin modification-related protein MEAF6 isoform X1
chromatin modification-related protein MEAF6 isoform X2
chromatin modification-related protein MEAF6 isoform X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
glutamate ionotropic receptor kainate type subunit 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 82 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
glutamate receptor ionotropic, kainate 3 isoform X1
glutamate ionotropic receptor kainate type subunit 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
glutamate receptor ionotropic, kainate 3 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
granulocyte colony-stimulating factor receptor
28S ribosomal protein S15, mitochondrial
organic solute carrier partner 1, transcript variant X1
organic solute carrier partner 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
U7 snRNA-associated Sm-like protein LSm10
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
thyroid hormone receptor associated protein 3, transcript variant X2
thyroid hormone receptor associated protein 3, transcript variant X1
thyroid hormone receptor-associated protein 3 isoform X2
thyroid hormone receptor-associated protein 3 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
trafficking protein particle complex 3, transcript variant X1
trafficking protein particle complex 3, transcript variant X2
trafficking protein particle complex subunit 3 isoform X1
trafficking protein particle complex subunit 3 isoform X2
collagen type VIII alpha 2 chain, transcript variant X2
collagen type VIII alpha 2 chain, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
dyslexia-associated protein KIAA0319-like protein homolog
interferon alpha inducible protein 27, transcript variant X2
interferon alpha inducible protein 27, transcript variant X1
interferon alpha-inducible protein 27, mitochondrial isoform X2
interferon alpha-inducible protein 27, mitochondrial isoform X1
zinc finger MYM-type protein 4-like, transcript variant X4
zinc finger MYM-type protein 4-like, transcript variant X5
zinc finger MYM-type protein 4-like, transcript variant X3
zinc finger MYM-type protein 4-like, transcript variant X2
zinc finger MYM-type protein 4-like, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
zinc finger MYM-type protein 4-like, transcript variant X1
zinc finger MYM-type protein 4-like isoform X5
zinc finger MYM-type protein 4-like isoform X3
zinc finger MYM-type protein 4-like isoform X2
zinc finger MYM-type protein 4-like isoform X7
zinc finger MYM-type protein 4-like isoform X1
zinc finger MYM-type protein 4-like isoform X4
zinc finger MYM-type protein 4-like, transcript variant X6
zinc finger MYM-type protein 4-like isoform X6
splicing factor proline and glutamine rich, transcript variant X3
splicing factor proline and glutamine rich, transcript variant X2
splicing factor proline and glutamine rich, transcript variant X1
splicing factor, proline- and glutamine-rich isoform X3
splicing factor, proline- and glutamine-rich isoform X1
splicing factor, proline- and glutamine-rich isoform X2
platelet-activating factor receptor-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
CUB and Sushi multiple domains 2, transcript variant X1
CUB and Sushi multiple domains 2, transcript variant X2
CUB and sushi domain-containing protein 2 isoform X1
CUB and sushi domain-containing protein 2 isoform X2
regulating synaptic membrane exocytosis 3, transcript variant X2
regulating synaptic membrane exocytosis 3, transcript variant X1
regulating synaptic membrane exocytosis protein 3 isoform X1
regulating synaptic membrane exocytosis protein 3 isoform X2
nuclear transcription factor Y subunit gamma, transcript variant X1
nuclear transcription factor Y subunit gamma, transcript variant X5
nuclear transcription factor Y subunit gamma, transcript variant X7
nuclear transcription factor Y subunit gamma, transcript variant X6
nuclear transcription factor Y subunit gamma, transcript variant X3
nuclear transcription factor Y subunit gamma, transcript variant X4
nuclear transcription factor Y subunit gamma, transcript variant X2
nuclear transcription factor Y subunit gamma isoform X1
nuclear transcription factor Y subunit gamma isoform X2
nuclear transcription factor Y subunit gamma isoform X4
nuclear transcription factor Y subunit gamma isoform X3
potassium voltage-gated channel subfamily Q member 4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
potassium voltage-gated channel subfamily KQT member 4
tubulointerstitial nephritis antigen like 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
tubulointerstitial nephritis antigen-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
protein tyrosine phosphatase 4A2, transcript variant X2
protein tyrosine phosphatase 4A2, transcript variant X3
protein tyrosine phosphatase 4A2, transcript variant X1
KH RNA binding domain containing, signal transduction associated 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
KH domain-containing, RNA-binding, signal transduction-associated protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
LCK proto-oncogene, Src family tyrosine kinase, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
LCK proto-oncogene, Src family tyrosine kinase, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins
family with sequence similarity 167 member B
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
eukaryotic translation initiation factor 3 subunit I
LOW QUALITY PROTEIN: doublecortin domain-containing protein 2B
coiled-coil domain-containing protein 28B
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
family with sequence similarity 229 member A
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
testis-specific serine/threonine-protein kinase 3
zinc finger and BTB domain containing 8B
zinc finger and BTB domain-containing protein 8B
zinc finger and BTB domain containing 8A
zinc finger and BTB domain-containing protein 8A
zinc finger and BTB domain-containing protein 8A-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
zinc finger and BTB domain containing 8 opposite strand, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
zinc finger and BTB domain containing 8 opposite strand, transcript variant X2
zinc finger and BTB domain containing 8 opposite strand, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
RB binding protein 4, chromatin remodeling factor
syncoilin, intermediate filament protein, transcript variant X2
syncoilin, intermediate filament protein, transcript variant X1
uncharacterized protein KIAA1522 homolog
fibronectin type III domain containing 5
fibronectin type III domain-containing protein 5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
neuron-specific calcium-binding protein hippocalcin
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
adenylate kinase 2, transcript variant X2
adenylate kinase 2, mitochondrial isoform X2
adenylate kinase 2, transcript variant X1
adenylate kinase 2, mitochondrial isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
NADH:ubiquinone oxidoreductase subunit S5
NADH dehydrogenase [ubiquinone] iron-sulfur protein 5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
microtubule-actin cross-linking factor 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
poly(A) binding protein cytoplasmic 4, transcript variant X3
poly(A) binding protein cytoplasmic 4, transcript variant X1
poly(A) binding protein cytoplasmic 4, transcript variant X2
polyadenylate-binding protein 4 isoform X3
polyadenylate-binding protein 4 isoform X1
polyadenylate-binding protein 4 isoform X2
poly(A) binding protein cytoplasmic 4, transcript variant X4
polyadenylate-binding protein 4 isoform X4
COORDINATES: nucleotide motif:Rfam:12.0:RF00431
hes related family bHLH transcription factor with YRPW motif like
hairy/enhancer-of-split related with YRPW motif-like protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
protein FAM49A-like, transcript variant X3
protein FAM49A-like, transcript variant X2
protein FAM49A-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
MYCL proto-oncogene, bHLH transcription factor
major facilitator superfamily domain containing 2A
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
sodium-dependent lysophosphatidylcholine symporter 1
cyclase associated actin cytoskeleton regulatory protein 1, transcript variant X1
cyclase associated actin cytoskeleton regulatory protein 1, transcript variant X3
cyclase associated actin cytoskeleton regulatory protein 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
hydroxymethylglutaryl-CoA lyase, mitochondrial
alpha-L-fucosidase 1, transcript variant X1
alpha-L-fucosidase 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
proline rich nuclear receptor coactivator 2
proline-rich nuclear receptor coactivator 2
serine and arginine rich splicing factor 10, transcript variant X5
serine and arginine rich splicing factor 10, transcript variant X3
serine and arginine rich splicing factor 10, transcript variant X4
serine/arginine-rich splicing factor 10 isoform X5
serine/arginine-rich splicing factor 10 isoform X4
serine/arginine-rich splicing factor 10 isoform X3
serine and arginine rich splicing factor 10, transcript variant X2
serine and arginine rich splicing factor 10, transcript variant X1
serine/arginine-rich splicing factor 10 isoform X2
serine/arginine-rich splicing factor 10 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 57% coverage of the annotated genomic feature by RNAseq alignments
sperm tail PG-rich repeat containing 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
sperm tail PG-rich repeat containing 1, transcript variant X1
O(6)-methylguanine-induced apoptosis 2 isoform X2
O(6)-methylguanine-induced apoptosis 2 isoform X1
NIPA like domain containing 3, transcript variant X1
NIPA like domain containing 3, transcript variant X3
NIPA like domain containing 3, transcript variant X2
RCAN family member 3, transcript variant X1
RCAN family member 3, transcript variant X2
RCAN family member 3, transcript variant X3
non-compact myelin associated protein, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
non-compact myelin associated protein, transcript variant X3
non-compact myelin associated protein, transcript variant X4
non-compact myelin associated protein, transcript variant X1
noncompact myelin-associated protein isoform X1
noncompact myelin-associated protein isoform X2
noncompact myelin-associated protein isoform X3
serine and arginine repetitive matrix 1, transcript variant X1
serine and arginine repetitive matrix 1, transcript variant X2
serine and arginine repetitive matrix 1, transcript variant X4
serine and arginine repetitive matrix 1, transcript variant X3
serine and arginine repetitive matrix 1, transcript variant X5
serine/arginine repetitive matrix protein 1 isoform X1
serine/arginine repetitive matrix protein 1 isoform X2
serine/arginine repetitive matrix protein 1 isoform X4
serine/arginine repetitive matrix protein 1 isoform X3
serine/arginine repetitive matrix protein 1 isoform X5
serine and arginine repetitive matrix 1, transcript variant X6
serine/arginine repetitive matrix protein 1 isoform X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
chloride intracellular channel protein 4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transmembrane protein 50A, transcript variant X2
transmembrane protein 50A, transcript variant X1
Rh blood group CcEe antigens, transcript variant X5
Rh blood group CcEe antigens, transcript variant X1
Rh blood group CcEe antigens, transcript variant X4
Rh blood group CcEe antigens, transcript variant X3
Rh blood group CcEe antigens, transcript variant X2
low density lipoprotein receptor adaptor protein 1, transcript variant X1
low density lipoprotein receptor adaptor protein 1, transcript variant X3
low density lipoprotein receptor adaptor protein 1, transcript variant X2
low density lipoprotein receptor adapter protein 1 isoform X1
low density lipoprotein receptor adapter protein 1 isoform X2
low density lipoprotein receptor adapter protein 1 isoform X3
low density lipoprotein receptor adaptor protein 1, transcript variant X4
low density lipoprotein receptor adapter protein 1 isoform X4
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 2 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: mannosyl-oligosaccharide 1,2-alpha-mannosidase IC
mitochondrial fission regulator 1 like, transcript variant X1
mitochondrial fission regulator 1 like, transcript variant X2