Aythya fuligula isolate bAytFul2 chromosome 20, bAytFul2.pri, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Aythyinae; Aythya.
REFSEQ INFORMATION: The reference sequence is identical to\nCM020319.1.\nAssembly name: bAytFul2.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/12/31. The original whole-genome shotgun project has the\naccession WNMM00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 20-SEP-2019\nAssembly Method :: FALCON v. 2018.31.08-03.06; FALCON-Unzip\n v. 6.0.0.47841; purge_haplotigs v.\n v1.0.3+ 1.Nov.2018; scaff10x v. 4.1.0;\n Bionano Solve DLS v. 3.2.1; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishing\n & gap filling v. 6.0.0.47841; longranger\n align v. 2.2.2; freebayes Illumina\n polishing v. 1.3; gEVAL manual curation\n v. 2019-09-20; VGP assembly pipeline\n individual v. 1.5\nAssembly Name :: bAytFul2.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 64.03x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Aythya fuligula Annotation Release\n 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Patrik Ellstrom, Mahmoud Naguib, Josef Jarhult
Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: fibrinogen-like protein 1-like protein
VPS37D subunit of ESCRT-I, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
vacuolar protein sorting-associated protein 37D isoform X1
VPS37D subunit of ESCRT-I, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
vacuolar protein sorting-associated protein 37D isoform X2
DnaJ heat shock protein family (Hsp40) member C30
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: dnaJ homolog subfamily C member 30, mitochondrial
BUD23 rRNA methyltransferase and ribosome maturation factor
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 5 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 70% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 5 bases in 4 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: probable 18S rRNA (guanine-N(7))-methyltransferase
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
MKS transition zone complex subunit 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
MKS transition zone complex subunit 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
Meckel syndrome type 1 protein isoform X1
Meckel syndrome type 1 protein isoform X2
BAF chromatin remodeling complex subunit BCL7B, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
BAF chromatin remodeling complex subunit BCL7B, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
B-cell CLL/lymphoma 7 protein family member B isoform X2
B-cell CLL/lymphoma 7 protein family member B isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 11% coverage of the annotated genomic feature by RNAseq alignments
carbohydrate-responsive element-binding protein
bromodomain adjacent to zinc finger domain 1B
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 5 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 5 bases in 4 codons; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: tyrosine-protein kinase BAZ1B
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
inactive peptidyl-prolyl cis-trans isomerase FKBP6
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 5 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 82% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 5 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM50
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 6 bases in 6 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 74% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 6 bases in 6 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: probable 28S rRNA (cytosine-C(5))-methyltransferase
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; deleted 7 bases in 6 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; deleted 7 bases in 6 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: nuclear envelope pore membrane protein POM 121
huntingtin interacting protein 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
huntingtin interacting protein 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
huntingtin-interacting protein 1 isoform X1
huntingtin-interacting protein 1 isoform X2
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: C-C motif chemokine 4 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 34% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA serine (anticodon UGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins
1-acyl-sn-glycerol-3-phosphate acyltransferase alpha-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
myeloperoxidase-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
myeloperoxidase-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
peripheral-type benzodiazepine receptor-associated protein 1
SPT4 homolog, DSIF elongation factor subunit
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
myotubularin related protein 4, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
myotubularin related protein 4, transcript variant X3
myotubularin related protein 4, transcript variant X1
myotubularin-related protein 4 isoform X2
myotubularin-related protein 4 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
coiled-coil domain-containing protein 183
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like, transcript variant X2
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
polypeptide N-acetylgalactosaminyltransferase 17
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
activator of transcription and developmental regulator AUTS2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
activator of transcription and developmental regulator AUTS2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
autism susceptibility gene 2 protein isoform X2
autism susceptibility gene 2 protein isoform X1
cytosolic arginine sensor for mTORC1 subunit 2
RCC1-like G exchanging factor-like protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
general transcription factor IIi, transcript variant X2
general transcription factor IIi, transcript variant X1
general transcription factor II-I isoform X2
general transcription factor II-I isoform X1
GTF2I repeat domain containing 1, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
GTF2I repeat domain containing 1, transcript variant X2
GTF2I repeat domain containing 1, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
GTF2I repeat domain containing 1, transcript variant X3
GTF2I repeat domain containing 1, transcript variant X1
general transcription factor II-I repeat domain-containing protein 1 isoform X5
general transcription factor II-I repeat domain-containing protein 1 isoform X2
general transcription factor II-I repeat domain-containing protein 1 isoform X4
general transcription factor II-I repeat domain-containing protein 1 isoform X3
general transcription factor II-I repeat domain-containing protein 1 isoform X1
CAP-Gly domain containing linker protein 2, transcript variant X2
CAP-Gly domain containing linker protein 2, transcript variant X3
CAP-Gly domain containing linker protein 2, transcript variant X1
CAP-Gly domain-containing linker protein 2 isoform X2
CAP-Gly domain-containing linker protein 2 isoform X1
eukaryotic translation initiation factor 4H, transcript variant X1
eukaryotic translation initiation factor 4H, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
eukaryotic translation initiation factor 4H isoform X2
eukaryotic translation initiation factor 4H isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
protein spinster homolog 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
protein spinster homolog 2, transcript variant X1
protein spinster homolog 2, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
protein spinster homolog 2, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
ubiquitin conjugating enzyme E2 G1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
ubiquitin-conjugating enzyme E2 G1 isoform X1
ubiquitin conjugating enzyme E2 G1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
ubiquitin-conjugating enzyme E2 G1 isoform X2
ankyrin repeat and FYVE domain containing 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
zinc finger ZZ-type and EF-hand domain containing 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
zinc finger ZZ-type and EF-hand domain-containing protein 1
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
sarcoplasmic/endoplasmic reticulum calcium ATPase 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
calcium/calmodulin dependent protein kinase kinase 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
calcium/calmodulin dependent protein kinase kinase 1, transcript variant X2
calcium/calmodulin dependent protein kinase kinase 1, transcript variant X5
calcium/calmodulin dependent protein kinase kinase 1, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
calcium/calmodulin dependent protein kinase kinase 1, transcript variant X4
calcium/calmodulin-dependent protein kinase kinase 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
complement component 1 Q subcomponent-binding protein, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
rabaptin, RAB GTPase binding effector protein 1
intraflagellar transport protein 22 homolog
collagen type XXVI alpha 1 chain, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
collagen type XXVI alpha 1 chain, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
collagen type XXVI alpha 1 chain, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
collagen type XXVI alpha 1 chain, transcript variant X2
3 beta-hydroxysteroid dehydrogenase type 7-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
cut like homeobox 1, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
cut like homeobox 1, transcript variant X1
cut like homeobox 1, transcript variant X4
cut like homeobox 1, transcript variant X2
cut like homeobox 1, transcript variant X3
ORAI calcium release-activated calcium modulator 2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
ORAI calcium release-activated calcium modulator 2, transcript variant X2
ORAI calcium release-activated calcium modulator 2, transcript variant X3
alpha-ketoglutarate-dependent dioxygenase alkB homolog 4
leucine rich repeats and WD repeat domain containing 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
leucine rich repeats and WD repeat domain containing 1, transcript variant X1
leucine rich repeats and WD repeat domain containing 1, transcript variant X3
leucine-rich repeat and WD repeat-containing protein 1
DNA-directed RNA polymerase II subunit RPB11-a
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 43% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uroplakin-3b-like protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
probable E3 ubiquitin-protein ligase DTX2
scavenger receptor cysteine rich family member with 4 domains
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
scavenger receptor cysteine-rich domain-containing group B protein
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
heat shock protein family B (small) member 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
serine/arginine repetitive matrix protein 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
serine/threonine/tyrosine interacting like 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
serine/threonine/tyrosine interacting like 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
serine/threonine/tyrosine-interacting-like protein 1 isoform X1
serine/threonine/tyrosine-interacting-like protein 1 isoform X2
NADPH--cytochrome P450 reductase, transcript variant X1
NADPH--cytochrome P450 reductase, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
NADPH--cytochrome P450 reductase, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
TATA-box binding protein associated factor 15
TATA-binding protein-associated factor 2N
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
RAS like family 10 member B, transcript variant X1
RAS like family 10 member B, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
ras-like protein family member 10B isoform X1
RAS like family 10 member B, transcript variant X3
ras-like protein family member 10B isoform X2
adaptor related protein complex 2 subunit beta 1, transcript variant X2
adaptor related protein complex 2 subunit beta 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00288
schlafen family member 13-like, transcript variant X1
schlafen family member 13-like, transcript variant X2
ring finger and FYVE like domain containing E3 ubiquitin protein ligase, transcript variant X2
ring finger and FYVE like domain containing E3 ubiquitin protein ligase, transcript variant X6
ring finger and FYVE like domain containing E3 ubiquitin protein ligase, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
ring finger and FYVE like domain containing E3 ubiquitin protein ligase, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
ring finger and FYVE like domain containing E3 ubiquitin protein ligase, transcript variant X1
E3 ubiquitin-protein ligase rififylin isoform X1
ring finger and FYVE like domain containing E3 ubiquitin protein ligase, transcript variant X5
E3 ubiquitin-protein ligase rififylin isoform X2
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
transmembrane protein 132E, transcript variant X2
transmembrane protein 132E, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 57% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
mitochondrial ribosomal protein S17, transcript variant X2
mitochondrial ribosomal protein S17, transcript variant X1
28S ribosomal protein S17, mitochondrial
phosphoserine phosphatase, transcript variant X2
phosphoserine phosphatase, transcript variant X1
COORDINATES: nucleotide motif:Rfam:12.0:RF00414
COORDINATES: nucleotide motif:Rfam:12.0:RF00398
sulfatase modifying factor 2, transcript variant X1
sulfatase modifying factor 2, transcript variant X2
inactive C-alpha-formylglycine-generating enzyme 2 isoform X1
inactive C-alpha-formylglycine-generating enzyme 2 isoform X2
phosphorylase kinase catalytic subunit gamma 1, transcript variant X3
phosphorylase kinase catalytic subunit gamma 1, transcript variant X2
phosphorylase kinase catalytic subunit gamma 1, transcript variant X1
phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform
coiled-coil-helix-coiled-coil-helix domain containing 2
coiled-coil-helix-coiled-coil-helix domain-containing protein 2
vitamin K epoxide reductase complex subunit 1 like 1
vitamin K epoxide reductase complex subunit 1-like protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA glycine (anticodon GCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
DNA-directed RNA polymerase III subunit RPC9
tyrosylprotein sulfotransferase 1, transcript variant X4
tyrosylprotein sulfotransferase 1, transcript variant X9
tyrosylprotein sulfotransferase 1, transcript variant X1
tyrosylprotein sulfotransferase 1, transcript variant X10
tyrosylprotein sulfotransferase 1, transcript variant X11
tyrosylprotein sulfotransferase 1, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
tyrosylprotein sulfotransferase 1, transcript variant X6
tyrosylprotein sulfotransferase 1, transcript variant X5
tyrosylprotein sulfotransferase 1, transcript variant X2
tyrosylprotein sulfotransferase 1, transcript variant X3
tyrosylprotein sulfotransferase 1, transcript variant X8
protein-tyrosine sulfotransferase 1 isoform X2
protein-tyrosine sulfotransferase 1 isoform X1
potassium channel tetramerization domain containing 7
RAB guanine nucleotide exchange factor 1, transcript variant X4
RAB guanine nucleotide exchange factor 1, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
RAB guanine nucleotide exchange factor 1, transcript variant X2
RAB guanine nucleotide exchange factor 1, transcript variant X1
RAB guanine nucleotide exchange factor 1, transcript variant X3
leucine-rich repeat-containing protein 75A
uncharacterized LOC116497274, transcript variant X2
uncharacterized LOC116497274, transcript variant X1
COORDINATES: nucleotide motif:Rfam:12.0:RF00571
COORDINATES: nucleotide motif:Rfam:12.0:RF00277
nuclear cap binding subunit 3, transcript variant X2
nuclear cap binding subunit 3, transcript variant X1
nuclear cap-binding protein subunit 3 isoform X2
nuclear cap-binding protein subunit 3 isoform X1
CRK proto-oncogene, adaptor protein, transcript variant X1
CRK proto-oncogene, adaptor protein, transcript variant X2
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
inositol polyphosphate-5-phosphatase K, transcript variant X2
inositol polyphosphate-5-phosphatase K, transcript variant X1
inositol polyphosphate-5-phosphatase K, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
inositol polyphosphate 5-phosphatase K isoform X2
inositol polyphosphate 5-phosphatase K isoform X1
inositol polyphosphate 5-phosphatase K isoform X3
phosphatidylinositol transfer protein alpha
phosphatidylinositol transfer protein alpha isoform
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
large neutral amino acids transporter small subunit 4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
pre-mRNA processing factor 8, transcript variant X1
pre-mRNA processing factor 8, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 50% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
SET and MYND domain-containing protein 4
replication protein A1, transcript variant X1
replication protein A 70 kDa DNA-binding subunit isoform X1
replication protein A1, transcript variant X2
replication protein A 70 kDa DNA-binding subunit isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 59% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
2-(3-amino-3-carboxypropyl)histidine synthase subunit 1
OVCA2 serine hydrolase domain containing
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
SMG6 nonsense mediated mRNA decay factor, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
SMG6 nonsense mediated mRNA decay factor, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
telomerase-binding protein EST1A isoform X2
telomerase-binding protein EST1A isoform X1
pre-rRNA-processing protein TSR1 homolog
COORDINATES: nucleotide motif:Rfam:12.0:RF00580
DNA polymerase delta interacting protein 2
sterile alpha and TIR motif containing 1
sterile alpha and TIR motif-containing protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 88% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 31% coverage of the annotated genomic feature by RNAseq alignments
unc-119 lipid binding chaperone, transcript variant X2
unc-119 lipid binding chaperone, transcript variant X1
phosphatidylinositol glycan anchor biosynthesis class S
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 63% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
ribosomal protein S6 kinase-related protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 77% coverage of the annotated genomic feature by RNAseq alignments
SPT6 homolog, histone chaperone and transcription elongation factor
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 75% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
COORDINATES: nucleotide motif:Rfam:12.0:RF00266
COORDINATES: nucleotide motif:Rfam:12.0:RF00150
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
family with sequence similarity 222 member B, transcript variant X1
family with sequence similarity 222 member B, transcript variant X2
Era like 12S mitochondrial rRNA chaperone 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
dehydrogenase/reductase SDR family member 13
PHD finger protein 12, transcript variant X2
PHD finger protein 12, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 55% coverage of the annotated genomic feature by RNAseq alignments
nuclear fragile X mental retardation-interacting protein 2
ARF GTPase-activating protein GIT1 isoform X4
ARF GTPase-activating protein GIT1 isoform X2
ARF GTPase-activating protein GIT1 isoform X3
ARF GTPase-activating protein GIT1 isoform X5
ARF GTPase-activating protein GIT1 isoform X1
ankyrin repeat domain 13B, transcript variant X1
ankyrin repeat domain 13B, transcript variant X2
ankyrin repeat domain-containing protein 13B isoform X1
ankyrin repeat domain-containing protein 13B isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
EF-hand calcium-binding domain-containing protein 5
nuclear speckle splicing regulatory protein 1, transcript variant X1
nuclear speckle splicing regulatory protein 1 isoform X1
nuclear speckle splicing regulatory protein 1, transcript variant X2
nuclear speckle splicing regulatory protein 1 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transmembrane and immunoglobulin domain containing 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 60% coverage of the annotated genomic feature by RNAseq alignments
transmembrane and immunoglobulin domain-containing protein 1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
golgi SNAP receptor complex member 1, transcript variant X1
golgi SNAP receptor complex member 1, transcript variant X2
Golgi SNAP receptor complex member 1 isoform X1
Golgi SNAP receptor complex member 1 isoform X2
trafficking regulator of GLUT4 (SLC2A4) 1, transcript variant X1
trafficking regulator of GLUT4 (SLC2A4) 1, transcript variant X2
trafficking regulator of GLUT4 1 isoform X1
trafficking regulator of GLUT4 1 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
class A basic helix-loop-helix protein 9
ABR activator of RhoGEF and GTPase, transcript variant X1
ABR activator of RhoGEF and GTPase, transcript variant X2
active breakpoint cluster region-related protein isoform X2
active breakpoint cluster region-related protein isoform X1
ABR activator of RhoGEF and GTPase, transcript variant X3
active breakpoint cluster region-related protein isoform X3
ABR activator of RhoGEF and GTPase, transcript variant X4
active breakpoint cluster region-related protein isoform X4
translocase of inner mitochondrial membrane 22
mitochondrial import inner membrane translocase subunit Tim22
sperm antigen with calponin homology and coiled-coil domains 1, transcript variant X1
sperm antigen with calponin homology and coiled-coil domains 1, transcript variant X3
sperm antigen with calponin homology and coiled-coil domains 1, transcript variant X2
zinc finger SWIM-type containing 7, transcript variant X1
zinc finger SWIM domain-containing protein 7 isoform X1
zinc finger SWIM-type containing 7, transcript variant X2
zinc finger SWIM domain-containing protein 7 isoform X2
zinc finger SWIM-type containing 7, transcript variant X3
zinc finger SWIM domain-containing protein 7 isoform X3
zinc finger SWIM-type containing 7, transcript variant X4
zinc finger SWIM domain-containing protein 7 isoform X4
tetratricopeptide repeat domain 19, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
tetratricopeptide repeat protein 19, mitochondrial isoform X1
tetratricopeptide repeat domain 19, transcript variant X2
tetratricopeptide repeat protein 19, mitochondrial isoform X2
nuclear receptor corepressor 1, transcript variant X4
nuclear receptor corepressor 1, transcript variant X2
nuclear receptor corepressor 1, transcript variant X5
nuclear receptor corepressor 1, transcript variant X6
nuclear receptor corepressor 1, transcript variant X1
nuclear receptor corepressor 1, transcript variant X3
nuclear receptor corepressor 1 isoform X2
nuclear receptor corepressor 1 isoform X3
nuclear receptor corepressor 1 isoform X1
phosphatidylinositol glycan anchor biosynthesis class L
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transient receptor potential cation channel subfamily V member 2-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transient receptor potential cation channel subfamily V member 2-like, transcript variant X3
transient receptor potential cation channel subfamily V member 2-like, transcript variant X1
transient receptor potential cation channel subfamily V member 2-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transient receptor potential cation channel subfamily V member 2-like isoform X1
transient receptor potential cation channel subfamily V member 2-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
purinergic receptor P2X 5, transcript variant X1
purinergic receptor P2X 5, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
cystinosin, lysosomal cystine transporter
sedoheptulokinase, transcript variant X1
sedoheptulokinase, transcript variant X2
transient receptor potential cation channel subfamily V member 1-like
transient receptor potential cation channel subfamily V member 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
A-kinase anchor protein 10, mitochondrial
unc-51 like autophagy activating kinase 2
aldehyde dehydrogenase family 3 member A2-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
aldehyde dehydrogenase family 3 member A2-like, transcript variant X1
aldehyde dehydrogenase family 3 member A2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
multidrug and toxin extrusion protein 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
multidrug and toxin extrusion protein 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
gem nuclear organelle associated protein 4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
vacuolar protein sorting-associated protein 53 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
double C2 domain beta, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
double C2 domain beta, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
double C2-like domain-containing protein beta isoform X1
double C2-like domain-containing protein beta isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 92 Proteins
testis expressed 14, intercellular bridge forming factor
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments
inactive serine/threonine-protein kinase TEX14
COORDINATES: nucleotide motif:Rfam:12.0:RF00012
protein phosphatase, Mg2+/Mn2+ dependent 1E
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
tripartite motif containing 37, transcript variant X1
E3 ubiquitin-protein ligase TRIM37 isoform X1
tripartite motif containing 37, transcript variant X2
E3 ubiquitin-protein ligase TRIM37 isoform X2
spindle and kinetochore associated complex subunit 2
spindle and kinetochore-associated protein 2
SMG8 nonsense mediated mRNA decay factor
glycerophosphodiester phosphodiesterase domain containing 1
probable ATP-dependent RNA helicase DHX40
clathrin heavy chain, transcript variant X1
clathrin heavy chain, transcript variant X2
peptidyl-tRNA hydrolase 2, mitochondrial
vacuole membrane protein 1, transcript variant X1
vacuole membrane protein 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
ring finger protein, transmembrane 1, transcript variant X2
ring finger protein, transmembrane 1, transcript variant X1
E3 ubiquitin-protein ligase RNFT1 isoform X2
E3 ubiquitin-protein ligase RNFT1 isoform X1
mediator of RNA polymerase II transcription subunit 13
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
BRCA1 interacting protein C-terminal helicase 1, transcript variant X1
BRCA1 interacting protein C-terminal helicase 1, transcript variant X2
Fanconi anemia group J protein isoform X1
Fanconi anemia group J protein isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 6% coverage of the annotated genomic feature by RNAseq alignments
BCAS3 microtubule associated cell migration factor, transcript variant X8
BCAS3 microtubule associated cell migration factor, transcript variant X7
BCAS3 microtubule associated cell migration factor, transcript variant X6
BCAS3 microtubule associated cell migration factor, transcript variant X1
BCAS3 microtubule associated cell migration factor, transcript variant X4
breast carcinoma-amplified sequence 3 isoform X8
breast carcinoma-amplified sequence 3 isoform X1
breast carcinoma-amplified sequence 3 isoform X4
breast carcinoma-amplified sequence 3 isoform X7
breast carcinoma-amplified sequence 3 isoform X6
BCAS3 microtubule associated cell migration factor, transcript variant X2
BCAS3 microtubule associated cell migration factor, transcript variant X3
breast carcinoma-amplified sequence 3 isoform X2
breast carcinoma-amplified sequence 3 isoform X3
BCAS3 microtubule associated cell migration factor, transcript variant X5
breast carcinoma-amplified sequence 3 isoform X5
protein phosphatase, Mg2+/Mn2+ dependent 1D
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
amyloid beta precursor protein binding protein 2
ubiquitin specific peptidase 32, transcript variant X1
ubiquitin specific peptidase 32, transcript variant X2
ubiquitin carboxyl-terminal hydrolase 32 isoform X1
ubiquitin carboxyl-terminal hydrolase 32 isoform X2
zinc finger HIT domain-containing protein 3
phosphatidylinositol glycan anchor biosynthesis class W, transcript variant X2
phosphatidylinositol glycan anchor biosynthesis class W, transcript variant X1
phosphatidylinositol glycan anchor biosynthesis class W, transcript variant X3
phosphatidylinositol-glycan biosynthesis class W protein isoform X2
phosphatidylinositol-glycan biosynthesis class W protein isoform X1
gametogenetin binding protein 2, transcript variant X1
gametogenetin binding protein 2, transcript variant X2
gametogenetin-binding protein 2 isoform X1
gametogenetin-binding protein 2 isoform X2
dehydrogenase/reductase SDR family member 11
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
apoptosis antagonizing transcription factor
acetyl-CoA carboxylase alpha, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
acetyl-CoA carboxylase alpha, transcript variant X3
acetyl-CoA carboxylase alpha, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
acetyl-CoA carboxylase alpha, transcript variant X6
acetyl-CoA carboxylase alpha, transcript variant X5
acetyl-CoA carboxylase alpha, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
probable ATP-dependent RNA helicase DDX52
hepatocyte nuclear factor 1-beta isoform X2
hepatocyte nuclear factor 1-beta isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
serine and arginine rich splicing factor 1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: serine/arginine-rich splicing factor 1
28S ribosomal protein S23, mitochondrial
musashi RNA binding protein 2, transcript variant X5
musashi RNA binding protein 2, transcript variant X4
musashi RNA binding protein 2, transcript variant X3
musashi RNA binding protein 2, transcript variant X2
musashi RNA binding protein 2, transcript variant X1
RNA-binding protein Musashi homolog 2 isoform X5
RNA-binding protein Musashi homolog 2 isoform X4
RNA-binding protein Musashi homolog 2 isoform X3
RNA-binding protein Musashi homolog 2 isoform X2
RNA-binding protein Musashi homolog 2 isoform X1
musashi RNA binding protein 2, transcript variant X6
RNA-binding protein Musashi homolog 2 isoform X6
A-kinase anchoring protein 1, transcript variant X1
A-kinase anchoring protein 1, transcript variant X3
A-kinase anchoring protein 1, transcript variant X2
A-kinase anchor protein 1, mitochondrial
ecotropic viral integration site 2A, transcript variant X1
ecotropic viral integration site 2A, transcript variant X2
WD repeat and SOCS box-containing protein 1
kinase suppressor of ras 1, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
kinase suppressor of ras 1, transcript variant X2
kinase suppressor of ras 1, transcript variant X3
kinase suppressor of ras 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
LYR motif containing 9, transcript variant X3
LYR motif containing 9, transcript variant X2
LYR motif containing 9, transcript variant X4
LYR motif containing 9, transcript variant X1
LYR motif containing 9, transcript variant X5
LYR motif-containing protein 9 isoform X1
LYR motif-containing protein 9 isoform X2
serine/threonine-protein kinase NLK isoform X1
serine/threonine-protein kinase NLK isoform X2
intraflagellar transport protein 20 homolog
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2
small G protein signaling modulator 2, transcript variant X1
small G protein signaling modulator 2, transcript variant X5
small G protein signaling modulator 2, transcript variant X3
small G protein signaling modulator 2, transcript variant X6
small G protein signaling modulator 2, transcript variant X2
small G protein signaling modulator 2, transcript variant X7
small G protein signaling modulator 2 isoform X1
small G protein signaling modulator 2 isoform X5
small G protein signaling modulator 2 isoform X3
small G protein signaling modulator 2 isoform X6
small G protein signaling modulator 2 isoform X2
small G protein signaling modulator 2 isoform X7
small G protein signaling modulator 2, transcript variant X4
small G protein signaling modulator 2 isoform X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 90% coverage of the annotated genomic feature by RNAseq alignments
platelet activating factor acetylhydrolase 1b regulatory subunit 1, transcript variant X1
platelet activating factor acetylhydrolase 1b regulatory subunit 1, transcript variant X2
platelet-activating factor acetylhydrolase IB subunit alpha
clustered mitochondria homolog, transcript variant X1
clustered mitochondria homolog, transcript variant X2
clustered mitochondria protein homolog isoform X1
clustered mitochondria protein homolog isoform X2
coiled-coil domain containing 92B, transcript variant X2
coiled-coil domain containing 92B, transcript variant X1
coiled-coil domain containing 92B, transcript variant X3
coiled-coil domain containing 92B isoform X1
coiled-coil domain containing 92B isoform X2
RAP1 GTPase activating protein 2, transcript variant X1
RAP1 GTPase activating protein 2, transcript variant X2
RAP1 GTPase activating protein 2, transcript variant X3
rap1 GTPase-activating protein 2 isoform X1
rap1 GTPase-activating protein 2 isoform X2
rap1 GTPase-activating protein 2 isoform X3
RAP1 GTPase activating protein 2, transcript variant X7
RAP1 GTPase activating protein 2, transcript variant X4
rap1 GTPase-activating protein 2 isoform X5
RAP1 GTPase activating protein 2, transcript variant X6
RAP1 GTPase activating protein 2, transcript variant X5
rap1 GTPase-activating protein 2 isoform X4
RAP1 GTPase activating protein 2, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
rap1 GTPase-activating protein 2 isoform X6
WSC domain containing 1, transcript variant X1
WSC domain containing 1, transcript variant X2
solute carrier family 13 member 5, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
solute carrier family 13 member 5, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
solute carrier family 13 member 5, transcript variant X3
solute carrier family 13 member 5 isoform X2
solute carrier family 13 member 5 isoform X3
solute carrier family 13 member 5, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
solute carrier family 13 member 5 isoform X1
mediator of RNA polymerase II transcription subunit 31
thioredoxin domain-containing protein 17
KIAA0753 ortholog, transcript variant X2
KIAA0753 ortholog, transcript variant X1
KIAA0753 ortholog, transcript variant X3
PITPNM family member 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
PITPNM family member 3, transcript variant X2
membrane-associated phosphatidylinositol transfer protein 3 isoform X1
membrane-associated phosphatidylinositol transfer protein 3 isoform X2
PICALM interacting mitotic regulator, transcript variant X1
PICALM interacting mitotic regulator, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns