Aythya fuligula isolate bAytFul2 chromosome 20, bAytFul2.pri, whole genome shotgun sequence.
type: Entry
definition: Aythya fuligula isolate bAytFul2 chromosome 20, bAytFul2.pri, whole genome shotgun sequence.
sequence version: NC_045578.1
sequence date: 2020-01-30
sequence: sequence
division: CON
label: NC_045578.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA602521
dblink: SAMN12621346
keyword: WGS
keyword: RefSeq
source: Aythya fuligula (tufted duck)
organism: Aythya fuligula
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Aythyinae; Aythya.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020319.1.\nAssembly name: bAytFul2.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/12/31. The original whole-genome shotgun project has the\naccession WNMM00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 20-SEP-2019\nAssembly Method :: FALCON v. 2018.31.08-03.06; FALCON-Unzip\n v. 6.0.0.47841; purge_haplotigs v.\n v1.0.3+ 1.Nov.2018; scaff10x v. 4.1.0;\n Bionano Solve DLS v. 3.2.1; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishing\n & gap filling v. 6.0.0.47841; longranger\n align v. 2.2.2; freebayes Illumina\n polishing v. 1.3; gEVAL manual curation\n v. 2019-09-20; VGP assembly pipeline\n individual v. 1.5\nAssembly Name :: bAytFul2.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 64.03x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Aythya fuligula Annotation Release\n 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 11861279
topology: linear
so has quality: SO_0000987
location: 1..11861279
location: region:1-11861279:1
RO_0002162: 219594

NC_045578
type: RefSeq
SIO_000068: refseq

PRJNA602521
type: BioProject
SIO_000068: bioproject

SAMN12621346
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11861279:1
position: 11861279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-11861279:1:source
so part of: sequence
organism: Aythya fuligula
mol type: genomic DNA
isolate: bAytFul2
chromosome: 20
sex: female
tissue type: lung (powdered)
dev stage: adult
country: Sweden
lat lon: 59.8509 N 17.6300 E
collection date: 28-Aug-2017
collected by: Patrik Ellstrom, Mahmoud Naguib, Josef Jarhult

219594
type: Taxonomy
SIO_000068: taxonomy

LOC116497386
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116497386
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <25931..26479
location: region:25931-26479:1
so has part: feature:25931-26479:1:exon
subclass of: SO_0000010

116497386
type: Gene
SIO_000068: ncbigene

position:25931:1
position: 25931
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:26479:1
position: 26479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25931-26479:1:exon

LOC116497386
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116497386
product: putative protein TPRXL
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_032201121.1
SIO_010081: LOC116497386
subclass of: SO_0000673
so part of: LOC116497386
location: join(<25931..26002,26285..26479)
location: region:25931-26479:1
so has part: feature:25931-26002:1:exon
so has part: feature:26285-26479:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25931-26002:1:exon

position:26002:1
position: 26002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:26285-26479:1:exon

position:26285:1
position: 26285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116497386
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116497386
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative protein TPRXL
translation: SPSPSSSSSPSSSSSPSPSSSSSPPSSSSSPLSSSSPLSSYSSSSSLSPSSPSPSSSSSSSSSSSSSSSSPSLSYSSSSSSSSSSSFS
SIO_010081: LOC116497386
subclass of: SO_0000673
so part of: LOC116497386
location: join(<25931..26002,26285..26479)
location: region:25931-26479:1
so has part: feature:25931-26002:1:exon
so has part: feature:26285-26479:1:exon

XP_032057012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25931-26002:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26285-26479:1:exon

LOC116497388
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116497388
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(73346..75931)
location: region:73346-75931:-1
so has part: feature:73346-75931:-1:exon
subclass of: SO_0000010

116497388
type: Gene
SIO_000068: ncbigene

position:73346:-1
position: 73346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75931:-1
position: 75931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73346-75931:-1:exon

LOC116497388
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116497388
product: fibrinogen-like protein 1-like protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_032201123.1
SIO_010081: LOC116497388
subclass of: SO_0000673
so part of: LOC116497388
location: complement(join(73346..74001,75137..75253,75862..75931))
location: region:73346-75931:-1
so has part: feature:75862-75931:-1:exon
so has part: feature:75137-75253:-1:exon
so has part: feature:73346-74001:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:75862-75931:-1:exon

position:75862:-1
position: 75862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:75137-75253:-1:exon

position:75137:-1
position: 75137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75253:-1
position: 75253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:73346-74001:-1:exon

position:74001:-1
position: 74001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116497388
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116497388
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibrinogen-like protein 1-like protein
translation: MQHLAWEAASLSSCSLLSCAFVMGLQAGTRLLHRNLVILPVVMVMLLCVSAGPAVPTASSRTAAFAGFPADCSHLRKTSPSGVYVIQPAKSPPRVVWCDMDTEGKGWTVVQRNSHDTELTWKQSWTTYKYGFGNVQGDHWLGTEYLHLLTQQGTYKVRFVVRNKANVTHYAEYDIFRVESEATGYPLRLGRFSGDGDDYLTSYYPKKGGIHDNMKFSTTDRDQDQYSGNCASSYGGWWYDRCQNVLLNAKNHILWPGFCDSGDCASSLILVKPTDVCYLY
SIO_010081: LOC116497388
subclass of: SO_0000673
so part of: LOC116497388
location: complement(join(73346..74001,75137..75253,75862..75931))
location: region:73346-75931:-1
so has part: feature:75862-75931:-1:exon
so has part: feature:75137-75253:-1:exon
so has part: feature:73346-74001:-1:exon

XP_032057014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75862-75931:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75137-75253:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:73346-74001:-1:exon

LOC116497389
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116497389
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 79849..85731
location: region:79849-85731:1
so has part: feature:79849-85731:1:exon
subclass of: SO_0000010

116497389
type: Gene
SIO_000068: ncbigene

position:79849:1
position: 79849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85731:1
position: 85731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79849-85731:1:exon

LOC116497389
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116497389
product: fibrinogen-like protein 1-like protein
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032201124.1
SIO_010081: LOC116497389
subclass of: SO_0000673
so part of: LOC116497389
location: join(79849..79852,81459..81601,84059..84123,85103..85731)
location: region:79849-85731:1
so has part: feature:79849-79852:1:exon
so has part: feature:81459-81601:1:exon
so has part: feature:84059-84123:1:exon
so has part: feature:85103-85731:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:79849-79852:1:exon

position:79852:1
position: 79852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:81459-81601:1:exon

position:81459:1
position: 81459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81601:1
position: 81601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:84059-84123:1:exon

position:84059:1
position: 84059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84123:1
position: 84123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:85103-85731:1:exon

position:85103:1
position: 85103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116497389
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116497389
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: fibrinogen-like protein 1-like protein
translation: MATGTLCLLICTSLLAPAALLAFDIKNLHLCNGTLDEIMNLHPESFQLDKDDKHVRQVRDIAPHPPVAHGWPKDCSEIPAGSRSGVYIIQPKGLHQLVVYCEMNVTNGGWTVIQRNQKDTAVTWAESWSTYKYGFGNVRSEYWLGTEYIHQIAKQKVYQVRFVIWDTKNNIKFADYNLFSVEDESHGYRLRLGSYTGTAGDAMTSDNPNTMHDNMKFSTKDRDQDTYSKNCAYSYEGGWWYSACYSVRLNFKGGMTWGSLCKGDCKSSLILIKPAPYC
SIO_010081: LOC116497389
subclass of: SO_0000673
so part of: LOC116497389
location: join(79849..79852,81459..81601,84059..84123,85103..85731)
location: region:79849-85731:1
so has part: feature:79849-79852:1:exon
so has part: feature:81459-81601:1:exon
so has part: feature:84059-84123:1:exon
so has part: feature:85103-85731:1:exon

XP_032057015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79849-79852:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:81459-81601:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84059-84123:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85103-85731:1:exon

VPS37D
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: VPS37D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 90443..92874
location: region:90443-92874:1
so has part: feature:90443-92874:1:exon
subclass of: SO_0000010

116497264
type: Gene
SIO_000068: ncbigene

position:90443:1
position: 90443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92874:1
position: 92874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90443-92874:1:exon

VPS37D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: VPS37D
product: VPS37D subunit of ESCRT-I, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032200936.1
SIO_010081: VPS37D
subclass of: SO_0000673
so part of: VPS37D
location: join(90443..90565,91279..91450,91784..91866,92030..92874)
location: region:90443-92874:1
so has part: feature:90443-90565:1:exon
so has part: feature:91279-91450:1:exon
so has part: feature:91784-91866:1:exon
so has part: feature:92030-92874:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90443-90565:1:exon

position:90565:1
position: 90565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:91279-91450:1:exon

position:91279:1
position: 91279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91450:1
position: 91450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:91784-91866:1:exon

position:91784:1
position: 91784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91866:1
position: 91866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:92030-92874:1:exon

position:92030:1
position: 92030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VPS37D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: VPS37D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 37D isoform X1
translation: MARPLASPEAPRCFAALSTVQLRALLQDEPRLQRAARLSRKFQSLQLEREMCLASNSTLARENLSLRPQLEDGKASLAIKYQELREIQEACWDKQQRLETYLEKWSPQSALGQLQAKLDASEAESEAQMEQFLAQDLPLDAFLESFCQSRTRSHICRVQLEKLQELLQKGRADRDPAGPVGCPGVQVSPSPVRLAPLSSRATPKDLHLCYHFVPACLISSEAVAPFAMPAIPLKCHLPALGKQPAVPCPDTPMDLPLRLVQHVPLLSPRPFCVQQLPRHQKQEPPHR
SIO_010081: VPS37D
subclass of: SO_0000673
so part of: VPS37D
location: join(90443..90565,91279..91450,91784..91866,92030..92515)
location: region:90443-92515:1
so has part: feature:90443-90565:1:exon
so has part: feature:91279-91450:1:exon
so has part: feature:91784-91866:1:exon
so has part: feature:92030-92515:1:exon

XP_032056827.1
type: Protein
SIO_000068: ncbiprotein

position:92515:1
position: 92515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90443-90565:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91279-91450:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91784-91866:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:92030-92515:1:exon

VPS37D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: VPS37D
product: VPS37D subunit of ESCRT-I, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032200937.1
SIO_010081: VPS37D
subclass of: SO_0000673
so part of: VPS37D
location: join(90814..90950,91279..91450,91784..91866,92030..92874)
location: region:90814-92874:1
so has part: feature:90814-90950:1:exon
so has part: feature:91279-91450:1:exon
so has part: feature:91784-91866:1:exon
so has part: feature:92030-92874:1:exon

position:90814:1
position: 90814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90814-90950:1:exon

position:90950:1
position: 90950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:91279-91450:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91784-91866:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:92030-92874:1:exon

VPS37D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: VPS37D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 37D isoform X2
translation: MCLASNSTLARENLSLRPQLEDGKASLAIKYQELREIQEACWDKQQRLETYLEKWSPQSALGQLQAKLDASEAESEAQMEQFLAQDLPLDAFLESFCQSRTRSHICRVQLEKLQELLQKGRADRDPAGPVGCPGVQVSPSPVRLAPLSSRATPKDLHLCYHFVPACLISSEAVAPFAMPAIPLKCHLPALGKQPAVPCPDTPMDLPLRLVQHVPLLSPRPFCVQQLPRHQKQEPPHR
SIO_010081: VPS37D
subclass of: SO_0000673
so part of: VPS37D
location: join(91306..91450,91784..91866,92030..92515)
location: region:91306-92515:1
so has part: feature:91306-91450:1:exon
so has part: feature:91784-91866:1:exon
so has part: feature:92030-92515:1:exon

XP_032056828.1
type: Protein
SIO_000068: ncbiprotein

position:91306:1
position: 91306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91306-91450:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91784-91866:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92030-92515:1:exon

DNAJC30
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: DNAJC30
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(99338..100053)
location: region:99338-100053:-1
so has part: feature:99338-100053:-1:exon
subclass of: SO_0000010

116497460
type: Gene
SIO_000068: ncbigene

position:99338:-1
position: 99338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100053:-1
position: 100053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99338-100053:-1:exon

DNAJC30
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: DNAJC30
product: DnaJ heat shock protein family (Hsp40) member C30
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032201207.1
SIO_010081: DNAJC30
subclass of: SO_0000673
so part of: DNAJC30
location: complement(99338..100053)
location: region:99338-100053:-1
so has part: feature:99338-100053:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:99338-100053:-1:exon

DNAJC30
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: DNAJC30
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: dnaJ homolog subfamily C member 30, mitochondrial
translation: MEPAALGRLAAPPARRGRASAWRRAAPGHRGCGEALGPRRDLYEVLGVPPTATQAQIKTAYYEQSFRYHPDRNAGSAAAAERFAAVSEAYLVLGSAALRRKYDRGVLSREDVRGAPKPSGRPLTPAPPPARSAASSFSRRGPVPPPFDFDAFYRAHYGEQLERERMLRARREQLRLRREEAAAQGRFRLVSDLSVGLLFFLGVVLLYSLK
SIO_010081: DNAJC30
subclass of: SO_0000673
so part of: DNAJC30
location: complement(99411..100045)
location: region:99411-100045:-1
so has part: feature:99411-100045:-1:exon

XP_032057098.1
type: Protein
SIO_000068: ncbiprotein

position:99411:-1
position: 99411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100045:-1
position: 100045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99411-100045:-1:exon

BUD23
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: BUD23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 100128..105310
location: region:100128-105310:1
so has part: feature:100128-105310:1:exon
subclass of: SO_0000010

116497461
type: Gene
SIO_000068: ncbigene

position:100128:1
position: 100128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105310:1
position: 105310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100128-105310:1:exon

BUD23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: BUD23
product: BUD23 rRNA methyltransferase and ribosome maturation factor
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 5 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 70% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032201208.1
SIO_010081: BUD23
subclass of: SO_0000673
so part of: BUD23
location: join(100128..100196,100298..100335,100440..100535,100740..100824,100918..101014,101834..101937,102272..102331,102910..102995,103212..103258,103552..103616,104710..104796,104942..105310)
location: region:100128-105310:1
so has part: feature:100128-100196:1:exon
so has part: feature:100298-100335:1:exon
so has part: feature:100440-100535:1:exon
so has part: feature:100740-100824:1:exon
so has part: feature:100918-101014:1:exon
so has part: feature:101834-101937:1:exon
so has part: feature:102272-102331:1:exon
so has part: feature:102910-102995:1:exon
so has part: feature:103212-103258:1:exon
so has part: feature:103552-103616:1:exon
so has part: feature:104710-104796:1:exon
so has part: feature:104942-105310:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100128-100196:1:exon

position:100196:1
position: 100196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:100298-100335:1:exon

position:100298:1
position: 100298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100335:1
position: 100335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:100440-100535:1:exon

position:100440:1
position: 100440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100535:1
position: 100535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:100740-100824:1:exon

position:100740:1
position: 100740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100824:1
position: 100824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:100918-101014:1:exon

position:100918:1
position: 100918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101014:1
position: 101014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:101834-101937:1:exon

position:101834:1
position: 101834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101937:1
position: 101937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:102272-102331:1:exon

position:102272:1
position: 102272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102331:1
position: 102331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:102910-102995:1:exon

position:102910:1
position: 102910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102995:1
position: 102995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:103212-103258:1:exon

position:103212:1
position: 103212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103258:1
position: 103258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:103552-103616:1:exon

position:103552:1
position: 103552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103616:1
position: 103616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:104710-104796:1:exon

position:104710:1
position: 104710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104796:1
position: 104796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:104942-105310:1:exon

position:104942:1
position: 104942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BUD23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: BUD23
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 5 bases in 4 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:join(101937,102272..102273),aa:OTHER)
product: LOW QUALITY PROTEIN: probable 18S rRNA (guanine-N(7))-methyltransferase
translation: MAGSGRRPSTRGPPELFYDEVEARKYTQNSRVMEIQAQMSERAVELLGLPEDRPCLLLDVGCGSGLSGDFISEEGHYWIGMDLALQMLDVAVEREVEGDLLLADVGHGIPFRPGMFDGCISISAVQWLCNADKKSHRSSKSLYQFFSTLYHCLGKXSRAVLQLYPENSEQVQDTTLELITTQAMRAGFTGGMVVDYPNSTKAKKFFLCLFVGASGTLPKGLGTVCADGQEIQQAKFTSERSRFRNTKGKSVKKXRDWILEKKERRRRQGKEVRADTKYTGRKRRPHF
SIO_010081: BUD23
subclass of: SO_0000673
so part of: BUD23
location: join(100149..100196,100298..100335,100440..100535,100740..100824,100918..101014,101834..101937,102272..102331,102910..102995,103212..103258,103552..103616,104710..104796,104942..104996)
location: region:100149-104996:1
so has part: feature:100149-100196:1:exon
so has part: feature:100298-100335:1:exon
so has part: feature:100440-100535:1:exon
so has part: feature:100740-100824:1:exon
so has part: feature:100918-101014:1:exon
so has part: feature:101834-101937:1:exon
so has part: feature:102272-102331:1:exon
so has part: feature:102910-102995:1:exon
so has part: feature:103212-103258:1:exon
so has part: feature:103552-103616:1:exon
so has part: feature:104710-104796:1:exon
so has part: feature:104942-104996:1:exon

XP_032057099.1
type: Protein
SIO_000068: ncbiprotein

position:100149:1
position: 100149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104996:1
position: 104996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100149-100196:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100298-100335:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:100440-100535:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:100740-100824:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:100918-101014:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101834-101937:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102272-102331:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102910-102995:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:103212-103258:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:103552-103616:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:104710-104796:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:104942-104996:1:exon

STX1A
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: STX1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(105625..217672)
location: region:105625-217672:-1
so has part: feature:105625-217672:-1:exon
subclass of: SO_0000010

116497458
type: Gene
SIO_000068: ncbigene

position:105625:-1
position: 105625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217672:-1
position: 217672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105625-217672:-1:exon

STX1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: STX1A
product: syntaxin 1A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032201205.1
SIO_010081: STX1A
subclass of: SO_0000673
so part of: STX1A
location: complement(join(105625..108966,109672..109782,112338..112475,113146..113219,129262..129370,148793..148866,153213..153287,190932..191031,192292..192369,217593..217672))
location: region:105625-217672:-1
so has part: feature:217593-217672:-1:exon
so has part: feature:192292-192369:-1:exon
so has part: feature:190932-191031:-1:exon
so has part: feature:153213-153287:-1:exon
so has part: feature:148793-148866:-1:exon
so has part: feature:129262-129370:-1:exon
so has part: feature:113146-113219:-1:exon
so has part: feature:112338-112475:-1:exon
so has part: feature:109672-109782:-1:exon
so has part: feature:105625-108966:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:217593-217672:-1:exon

position:217593:-1
position: 217593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:192292-192369:-1:exon

position:192292:-1
position: 192292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192369:-1
position: 192369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:190932-191031:-1:exon

position:190932:-1
position: 190932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191031:-1
position: 191031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:153213-153287:-1:exon

position:153213:-1
position: 153213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153287:-1
position: 153287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:148793-148866:-1:exon

position:148793:-1
position: 148793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148866:-1
position: 148866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:129262-129370:-1:exon

position:129262:-1
position: 129262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129370:-1
position: 129370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:113146-113219:-1:exon

position:113146:-1
position: 113146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113219:-1
position: 113219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:112338-112475:-1:exon

position:112338:-1
position: 112338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112475:-1
position: 112475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:109672-109782:-1:exon

position:109672:-1
position: 109672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109782:-1
position: 109782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:105625-108966:-1:exon

position:108966:-1
position: 108966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STX1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: STX1A
product: syntaxin 1A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032201204.1
SIO_010081: STX1A
subclass of: SO_0000673
so part of: STX1A
location: complement(join(105625..108966,109672..109782,112338..112475,113146..113219,129262..129370,148793..148866,153213..153287,190932..191031,192292..192369,203946..204002))
location: region:105625-204002:-1
so has part: feature:203946-204002:-1:exon
so has part: feature:192292-192369:-1:exon
so has part: feature:190932-191031:-1:exon
so has part: feature:153213-153287:-1:exon
so has part: feature:148793-148866:-1:exon
so has part: feature:129262-129370:-1:exon
so has part: feature:113146-113219:-1:exon
so has part: feature:112338-112475:-1:exon
so has part: feature:109672-109782:-1:exon
so has part: feature:105625-108966:-1:exon

position:204002:-1
position: 204002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203946-204002:-1:exon

position:203946:-1
position: 203946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:192292-192369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:190932-191031:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153213-153287:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148793-148866:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:129262-129370:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:113146-113219:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:112338-112475:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109672-109782:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105625-108966:-1:exon

STX1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: STX1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-1A isoform X2
translation: MKDRTGELRAAKDSDDDDEVTVSVDRDRFMDEFFEQVEEIRGFIDKISENVEEVKRKHSAILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQHSTLSRKFVEVMSEYNATQTDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFSSGIIMDSNITKQALNEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHSVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTFGGIFG
SIO_010081: STX1A
subclass of: SO_0000673
so part of: STX1A
location: complement(join(108889..108966,109672..109782,112338..112475,113146..113219,129262..129370,148793..148866,153213..153287,190932..191031,192292..192369,217593..217622))
location: region:108889-217622:-1
so has part: feature:217593-217622:-1:exon
so has part: feature:192292-192369:-1:exon
so has part: feature:190932-191031:-1:exon
so has part: feature:153213-153287:-1:exon
so has part: feature:148793-148866:-1:exon
so has part: feature:129262-129370:-1:exon
so has part: feature:113146-113219:-1:exon
so has part: feature:112338-112475:-1:exon
so has part: feature:109672-109782:-1:exon
so has part: feature:108889-108966:-1:exon

XP_032057096.1
type: Protein
SIO_000068: ncbiprotein

position:108889:-1
position: 108889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217622:-1
position: 217622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217593-217622:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192292-192369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:190932-191031:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153213-153287:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148793-148866:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:129262-129370:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:113146-113219:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:112338-112475:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109672-109782:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:108889-108966:-1:exon

STX1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: STX1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-1A isoform X1
translation: MCTQFQTDTQSHQQAKDSDDDDEVTVSVDRDRFMDEFFEQVEEIRGFIDKISENVEEVKRKHSAILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQHSTLSRKFVEVMSEYNATQTDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFSSGIIMDSNITKQALNEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHSVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTFGGIFG
SIO_010081: STX1A
subclass of: SO_0000673
so part of: STX1A
location: complement(join(108889..108966,109672..109782,112338..112475,113146..113219,129262..129370,148793..148866,153213..153287,190932..191031,192292..192369,203946..203987))
location: region:108889-203987:-1
so has part: feature:203946-203987:-1:exon
so has part: feature:192292-192369:-1:exon
so has part: feature:190932-191031:-1:exon
so has part: feature:153213-153287:-1:exon
so has part: feature:148793-148866:-1:exon
so has part: feature:129262-129370:-1:exon
so has part: feature:113146-113219:-1:exon
so has part: feature:112338-112475:-1:exon
so has part: feature:109672-109782:-1:exon
so has part: feature:108889-108966:-1:exon

XP_032057095.1
type: Protein
SIO_000068: ncbiprotein

position:203987:-1
position: 203987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203946-203987:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192292-192369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:190932-191031:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153213-153287:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148793-148866:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:129262-129370:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:113146-113219:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:112338-112475:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109672-109782:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:108889-108966:-1:exon

STX1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: STX1A
product: syntaxin 1A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032201206.1
SIO_010081: STX1A
subclass of: SO_0000673
so part of: STX1A
location: complement(join(109818..109886,112338..112475,113146..113219,129262..129370,148793..148866,153213..153287,190932..191031,192292..192369,203946..204018))
location: region:109818-204018:-1
so has part: feature:203946-204018:-1:exon
so has part: feature:192292-192369:-1:exon
so has part: feature:190932-191031:-1:exon
so has part: feature:153213-153287:-1:exon
so has part: feature:148793-148866:-1:exon
so has part: feature:129262-129370:-1:exon
so has part: feature:113146-113219:-1:exon
so has part: feature:112338-112475:-1:exon
so has part: feature:109818-109886:-1:exon

position:109818:-1
position: 109818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204018:-1
position: 204018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203946-204018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192292-192369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:190932-191031:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153213-153287:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148793-148866:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:129262-129370:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:113146-113219:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:112338-112475:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109818-109886:-1:exon

position:109886:-1
position: 109886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STX1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: STX1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-1A isoform X3
translation: MCTQFQTDTQSHQQAKDSDDDDEVTVSVDRDRFMDEFFEQVEEIRGFIDKISENVEEVKRKHSAILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQHSTLSRKFVEVMSEYNATQTDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFSSGIIMDSNITKQALNEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGHWAG
SIO_010081: STX1A
subclass of: SO_0000673
so part of: STX1A
location: complement(join(109869..109886,112338..112475,113146..113219,129262..129370,148793..148866,153213..153287,190932..191031,192292..192369,203946..203987))
location: region:109869-203987:-1
so has part: feature:203946-203987:-1:exon
so has part: feature:192292-192369:-1:exon
so has part: feature:190932-191031:-1:exon
so has part: feature:153213-153287:-1:exon
so has part: feature:148793-148866:-1:exon
so has part: feature:129262-129370:-1:exon
so has part: feature:113146-113219:-1:exon
so has part: feature:112338-112475:-1:exon
so has part: feature:109869-109886:-1:exon

XP_032057097.1
type: Protein
SIO_000068: ncbiprotein

position:109869:-1
position: 109869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203946-203987:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192292-192369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:190932-191031:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153213-153287:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148793-148866:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:129262-129370:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:113146-113219:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:112338-112475:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109869-109886:-1:exon

MKS1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: MKS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(234045..247762)
location: region:234045-247762:-1
so has part: feature:234045-247762:-1:exon
subclass of: SO_0000010

116497239
type: Gene
SIO_000068: ncbigene

position:234045:-1
position: 234045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247762:-1
position: 247762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234045-247762:-1:exon

MKS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: MKS1
product: MKS transition zone complex subunit 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032200899.1
SIO_010081: MKS1
subclass of: SO_0000673
so part of: MKS1
location: complement(join(234045..235849,236331..236428,236509..236591,237774..237907,238453..238560,239890..239959,240816..240886,241639..241701,242216..242258,243239..243295,244153..244261,244686..244790,245109..245237,245437..245534,246624..246779,247350..247460,247495..247606,247680..247762))
location: region:234045-247762:-1
so has part: feature:247680-247762:-1:exon
so has part: feature:247495-247606:-1:exon
so has part: feature:247350-247460:-1:exon
so has part: feature:246624-246779:-1:exon
so has part: feature:245437-245534:-1:exon
so has part: feature:245109-245237:-1:exon
so has part: feature:244686-244790:-1:exon
so has part: feature:244153-244261:-1:exon
so has part: feature:243239-243295:-1:exon
so has part: feature:242216-242258:-1:exon
so has part: feature:241639-241701:-1:exon
so has part: feature:240816-240886:-1:exon
so has part: feature:239890-239959:-1:exon
so has part: feature:238453-238560:-1:exon
so has part: feature:237774-237907:-1:exon
so has part: feature:236509-236591:-1:exon
so has part: feature:236331-236428:-1:exon
so has part: feature:234045-235849:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:247680-247762:-1:exon

position:247680:-1
position: 247680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:247495-247606:-1:exon

position:247495:-1
position: 247495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247606:-1
position: 247606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:247350-247460:-1:exon

position:247350:-1
position: 247350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247460:-1
position: 247460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:246624-246779:-1:exon

position:246624:-1
position: 246624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246779:-1
position: 246779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:245437-245534:-1:exon

position:245437:-1
position: 245437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245534:-1
position: 245534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:245109-245237:-1:exon

position:245109:-1
position: 245109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245237:-1
position: 245237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:244686-244790:-1:exon

position:244686:-1
position: 244686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244790:-1
position: 244790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:244153-244261:-1:exon

position:244153:-1
position: 244153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244261:-1
position: 244261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:243239-243295:-1:exon

position:243239:-1
position: 243239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243295:-1
position: 243295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:242216-242258:-1:exon

position:242216:-1
position: 242216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242258:-1
position: 242258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:241639-241701:-1:exon

position:241639:-1
position: 241639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241701:-1
position: 241701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:240816-240886:-1:exon

position:240816:-1
position: 240816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240886:-1
position: 240886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:239890-239959:-1:exon

position:239890:-1
position: 239890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239959:-1
position: 239959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:238453-238560:-1:exon

position:238453:-1
position: 238453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238560:-1
position: 238560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:237774-237907:-1:exon

position:237774:-1
position: 237774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237907:-1
position: 237907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:236509-236591:-1:exon

position:236509:-1
position: 236509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236591:-1
position: 236591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:236331-236428:-1:exon

position:236331:-1
position: 236331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236428:-1
position: 236428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:234045-235849:-1:exon

position:235849:-1
position: 235849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MKS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: MKS1
product: MKS transition zone complex subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032200900.1
SIO_010081: MKS1
subclass of: SO_0000673
so part of: MKS1
location: complement(join(235743..235849,236331..236428,236509..236591,237774..237907,238453..238560,239890..239959,240816..240886,241639..241701,242216..242258,243239..243295,244153..244261,244686..244790,245109..245237,245437..245534,246624..246779,247350..247417,247485..247606,247680..247762))
location: region:235743-247762:-1
so has part: feature:247680-247762:-1:exon
so has part: feature:247485-247606:-1:exon
so has part: feature:247350-247417:-1:exon
so has part: feature:246624-246779:-1:exon
so has part: feature:245437-245534:-1:exon
so has part: feature:245109-245237:-1:exon
so has part: feature:244686-244790:-1:exon
so has part: feature:244153-244261:-1:exon
so has part: feature:243239-243295:-1:exon
so has part: feature:242216-242258:-1:exon
so has part: feature:241639-241701:-1:exon
so has part: feature:240816-240886:-1:exon
so has part: feature:239890-239959:-1:exon
so has part: feature:238453-238560:-1:exon
so has part: feature:237774-237907:-1:exon
so has part: feature:236509-236591:-1:exon
so has part: feature:236331-236428:-1:exon
so has part: feature:235743-235849:-1:exon

position:235743:-1
position: 235743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247680-247762:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247485-247606:-1:exon

position:247485:-1
position: 247485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:247350-247417:-1:exon

position:247417:-1
position: 247417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:246624-246779:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:245437-245534:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:245109-245237:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:244686-244790:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:244153-244261:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:243239-243295:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:242216-242258:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:241639-241701:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:240816-240886:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:239890-239959:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:238453-238560:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:237774-237907:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:236509-236591:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:236331-236428:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:235743-235849:-1:exon

MKS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: MKS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Meckel syndrome type 1 protein isoform X1
translation: MAERLWGAEAGGAVYRSRDPVRNLRLRVRIQRVTAAGPLPAQDSPPPPPLSAPRGPELLALAARALLGAAGGDRPLTADARRPPDEEEEAEVGWQEKLFSQFEVDLYQNESACQTHLDRQYHKEILKLEKAGGRKNYRIFTYTDHDRFTNLEEHCQKVTDSDHEVPSYLAERMANVRRRRQDRKPIEANSLKSKIITWEPSEEFIKNNHVINTPVQTMYIMGDLGPYGKLGQREYERVLCTIKVDGNGVITVKPDFTGTKGAYWIELDRQKRELWKYTIENASIQVQQEEEEREQRVFRDLYSRHKEYLSGLVGSEFETTLPGTLRLFVNGEVVSAQGYEYDNLYVHFFLELPGHWSSPAFQQLSGVTQTCATKTEDWDNVAYFCYPFTLEMFFSQENESEDCLPQWPVLYFEVLSLDFWQRYRVEGYGSLVLPASPGLHILTIPTWRPVELGTVAELRRFFIGGSPELEDMTYVRIPATFKGERLSRFGFHTETTGSVTFRLYCLQQSKAFLETSASRHHMQSVLDRLGGFSQQSSVYNVLEAFQKARCRMQEARESLPQDLINSSFYTVHKTQEP
SIO_010081: MKS1
subclass of: SO_0000673
so part of: MKS1
location: complement(join(235743..235849,236331..236428,236509..236591,237774..237907,238453..238560,239890..239959,240816..240886,241639..241701,242216..242258,243239..243295,244153..244261,244686..244790,245109..245237,245437..245534,246624..246779,247350..247460,247495..247606,247680..247759))
location: region:235743-247759:-1
so has part: feature:247680-247759:-1:exon
so has part: feature:247495-247606:-1:exon
so has part: feature:247350-247460:-1:exon
so has part: feature:246624-246779:-1:exon
so has part: feature:245437-245534:-1:exon
so has part: feature:245109-245237:-1:exon
so has part: feature:244686-244790:-1:exon
so has part: feature:244153-244261:-1:exon
so has part: feature:243239-243295:-1:exon
so has part: feature:242216-242258:-1:exon
so has part: feature:241639-241701:-1:exon
so has part: feature:240816-240886:-1:exon
so has part: feature:239890-239959:-1:exon
so has part: feature:238453-238560:-1:exon
so has part: feature:237774-237907:-1:exon
so has part: feature:236509-236591:-1:exon
so has part: feature:236331-236428:-1:exon
so has part: feature:235743-235849:-1:exon

XP_032056790.1
type: Protein
SIO_000068: ncbiprotein

position:247759:-1
position: 247759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247680-247759:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247495-247606:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:247350-247460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:246624-246779:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:245437-245534:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:245109-245237:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:244686-244790:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:244153-244261:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:243239-243295:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:242216-242258:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:241639-241701:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:240816-240886:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:239890-239959:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:238453-238560:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:237774-237907:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:236509-236591:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:236331-236428:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:235743-235849:-1:exon

MKS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: MKS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Meckel syndrome type 1 protein isoform X2
translation: MAERLWGAEAGGAVYRSRDPVRNLRLRVRIQRVTAAGPLPAQDSPPPPPLSAPRGPELLALAARASPDARRPPDEEEEAEVGWQEKLFSQFEVDLYQNESACQTHLDRQYHKEILKLEKAGGRKNYRIFTYTDHDRFTNLEEHCQKVTDSDHEVPSYLAERMANVRRRRQDRKPIEANSLKSKIITWEPSEEFIKNNHVINTPVQTMYIMGDLGPYGKLGQREYERVLCTIKVDGNGVITVKPDFTGTKGAYWIELDRQKRELWKYTIENASIQVQQEEEEREQRVFRDLYSRHKEYLSGLVGSEFETTLPGTLRLFVNGEVVSAQGYEYDNLYVHFFLELPGHWSSPAFQQLSGVTQTCATKTEDWDNVAYFCYPFTLEMFFSQENESEDCLPQWPVLYFEVLSLDFWQRYRVEGYGSLVLPASPGLHILTIPTWRPVELGTVAELRRFFIGGSPELEDMTYVRIPATFKGERLSRFGFHTETTGSVTFRLYCLQQSKAFLETSASRHHMQSVLDRLGGFSQQSSVYNVLEAFQKARCRMQEARESLPQDLINSSFYTVHKTQEP
SIO_010081: MKS1
subclass of: SO_0000673
so part of: MKS1
location: complement(join(235743..235849,236331..236428,236509..236591,237774..237907,238453..238560,239890..239959,240816..240886,241639..241701,242216..242258,243239..243295,244153..244261,244686..244790,245109..245237,245437..245534,246624..246779,247350..247417,247485..247606,247680..247759))
location: region:235743-247759:-1
so has part: feature:247680-247759:-1:exon
so has part: feature:247485-247606:-1:exon
so has part: feature:247350-247417:-1:exon
so has part: feature:246624-246779:-1:exon
so has part: feature:245437-245534:-1:exon
so has part: feature:245109-245237:-1:exon
so has part: feature:244686-244790:-1:exon
so has part: feature:244153-244261:-1:exon
so has part: feature:243239-243295:-1:exon
so has part: feature:242216-242258:-1:exon
so has part: feature:241639-241701:-1:exon
so has part: feature:240816-240886:-1:exon
so has part: feature:239890-239959:-1:exon
so has part: feature:238453-238560:-1:exon
so has part: feature:237774-237907:-1:exon
so has part: feature:236509-236591:-1:exon
so has part: feature:236331-236428:-1:exon
so has part: feature:235743-235849:-1:exon

XP_032056791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247680-247759:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247485-247606:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:247350-247417:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:246624-246779:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:245437-245534:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:245109-245237:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:244686-244790:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:244153-244261:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:243239-243295:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:242216-242258:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:241639-241701:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:240816-240886:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:239890-239959:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:238453-238560:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:237774-237907:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:236509-236591:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:236331-236428:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:235743-235849:-1:exon

BCL7B
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: BCL7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(259047..264487)
location: region:259047-264487:-1
so has part: feature:259047-264487:-1:exon
subclass of: SO_0000010

116497263
type: Gene
SIO_000068: ncbigene

position:259047:-1
position: 259047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264487:-1
position: 264487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259047-264487:-1:exon

BCL7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: BCL7B
product: BAF chromatin remodeling complex subunit BCL7B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032200933.1
SIO_010081: BCL7B
subclass of: SO_0000673
so part of: BCL7B
location: complement(join(259047..261340,261796..261875,262102..262287,263623..263719,263973..264048,264310..264487))
location: region:259047-264487:-1
so has part: feature:264310-264487:-1:exon
so has part: feature:263973-264048:-1:exon
so has part: feature:263623-263719:-1:exon
so has part: feature:262102-262287:-1:exon
so has part: feature:261796-261875:-1:exon
so has part: feature:259047-261340:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:264310-264487:-1:exon

position:264310:-1
position: 264310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:263973-264048:-1:exon

position:263973:-1
position: 263973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264048:-1
position: 264048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:263623-263719:-1:exon

position:263623:-1
position: 263623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263719:-1
position: 263719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:262102-262287:-1:exon

position:262102:-1
position: 262102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262287:-1
position: 262287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:261796-261875:-1:exon

position:261796:-1
position: 261796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261875:-1
position: 261875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:259047-261340:-1:exon

position:261340:-1
position: 261340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BCL7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: BCL7B
product: BAF chromatin remodeling complex subunit BCL7B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032200934.1
SIO_010081: BCL7B
subclass of: SO_0000673
so part of: BCL7B
location: complement(join(259047..261340,261796..261875,262102..262272,263623..263719,263973..264048,264310..264485))
location: region:259047-264485:-1
so has part: feature:264310-264485:-1:exon
so has part: feature:263973-264048:-1:exon
so has part: feature:263623-263719:-1:exon
so has part: feature:262102-262272:-1:exon
so has part: feature:261796-261875:-1:exon
so has part: feature:259047-261340:-1:exon

position:264485:-1
position: 264485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264310-264485:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263973-264048:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:263623-263719:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262102-262272:-1:exon

position:262272:-1
position: 262272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:261796-261875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:259047-261340:-1:exon

BCL7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: BCL7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B-cell CLL/lymphoma 7 protein family member B isoform X2
translation: MSGRSVRAETRSRAKDDIKKVMAAIERVRRWEKKWVTVGDTSLRIFKWVPVADSKEKEKSKSSGSTAREPNGFPADTSANSSLLLEFQDENSNQSSLSDVYQLKVDSSPNSSPSPQQSESMSPAHTSDFRTDDSQPPTLGQETLEEPSLPSSEVADEPPTLTKEEPVPLETQVTEEEEDSGAPPLKRFCADQNSVCHTASES
SIO_010081: BCL7B
subclass of: SO_0000673
so part of: BCL7B
location: complement(join(261248..261340,261796..261875,262102..262272,263623..263719,263973..264048,264310..264401))
location: region:261248-264401:-1
so has part: feature:264310-264401:-1:exon
so has part: feature:263973-264048:-1:exon
so has part: feature:263623-263719:-1:exon
so has part: feature:262102-262272:-1:exon
so has part: feature:261796-261875:-1:exon
so has part: feature:261248-261340:-1:exon

XP_032056825.1
type: Protein
SIO_000068: ncbiprotein

position:261248:-1
position: 261248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264401:-1
position: 264401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264310-264401:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263973-264048:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:263623-263719:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262102-262272:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:261796-261875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:261248-261340:-1:exon

BCL7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: BCL7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B-cell CLL/lymphoma 7 protein family member B isoform X1
translation: MSGRSVRAETRSRAKDDIKKVMAAIERVRRWEKKWVTVGDTSLRIFKWVPVADSKEKEKSKSSGSTAREPNGFPADTSANSSLLLEFQGAVSADENSNQSSLSDVYQLKVDSSPNSSPSPQQSESMSPAHTSDFRTDDSQPPTLGQETLEEPSLPSSEVADEPPTLTKEEPVPLETQVTEEEEDSGAPPLKRFCADQNSVCHTASES
SIO_010081: BCL7B
subclass of: SO_0000673
so part of: BCL7B
location: complement(join(261248..261340,261796..261875,262102..262287,263623..263719,263973..264048,264310..264401))
location: region:261248-264401:-1
so has part: feature:264310-264401:-1:exon
so has part: feature:263973-264048:-1:exon
so has part: feature:263623-263719:-1:exon
so has part: feature:262102-262287:-1:exon
so has part: feature:261796-261875:-1:exon
so has part: feature:261248-261340:-1:exon

XP_032056824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264310-264401:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263973-264048:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:263623-263719:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262102-262287:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:261796-261875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:261248-261340:-1:exon

TBL2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TBL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(265096..269465)
location: region:265096-269465:-1
so has part: feature:265096-269465:-1:exon
subclass of: SO_0000010

116497390
type: Gene
SIO_000068: ncbigene

position:265096:-1
position: 265096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269465:-1
position: 269465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265096-269465:-1:exon

TBL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: TBL2
product: transducin beta like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032201125.1
SIO_010081: TBL2
subclass of: SO_0000673
so part of: TBL2
location: complement(join(265096..265679,266041..266193,267077..267203,268065..268216,268860..269044,269119..269246,269324..269465))
location: region:265096-269465:-1
so has part: feature:269324-269465:-1:exon
so has part: feature:269119-269246:-1:exon
so has part: feature:268860-269044:-1:exon
so has part: feature:268065-268216:-1:exon
so has part: feature:267077-267203:-1:exon
so has part: feature:266041-266193:-1:exon
so has part: feature:265096-265679:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:269324-269465:-1:exon

position:269324:-1
position: 269324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:269119-269246:-1:exon

position:269119:-1
position: 269119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269246:-1
position: 269246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:268860-269044:-1:exon

position:268860:-1
position: 268860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269044:-1
position: 269044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:268065-268216:-1:exon

position:268065:-1
position: 268065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268216:-1
position: 268216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:267077-267203:-1:exon

position:267077:-1
position: 267077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267203:-1
position: 267203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:266041-266193:-1:exon

position:266041:-1
position: 266041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266193:-1
position: 266193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:265096-265679:-1:exon

position:265679:-1
position: 265679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TBL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: TBL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transducin beta-like protein 2
translation: MEPAALTGWGPLGALVLVLVLVPVLVPLLAAALRRAAPRGLPAAPPAGPGASSAAARPEGLRKAKLPARARRDKPQPHSFTHRLLVAALKGHSGSVSCLDFSSSGKYLASCADDRTVRLWSTRDFTAREHRCLRANVELDHAELVRFSPDCRAFIVWLANGETIRVYKMTKKDDGTFTFTATSEDFPKKHKAPVINIGIAETGKFIMTASSDTTILIWNLKGEVLASINTNQMNNAYATVSPCGRFVASCGFTPDVKVWEVCFGKSGDFREVIRAFELKGHTAGIHYFSFSNDSRRMATVSKDGTWKFWDTDVEYKKQQDPYLLLTGKCEVTEPCHIALSPDAHVAAISCGTSIMVYNTRRGEEEERFVGVHGQCITDLAFDTSSRYLVSCGDRAIRVFHNTAGYRAVVEEMETMLKKTANKATRERLEQQITSAKKALAAIYGRKH
SIO_010081: TBL2
subclass of: SO_0000673
so part of: TBL2
location: complement(join(265223..265679,266041..266193,267077..267203,268065..268216,268860..269044,269119..269246,269324..269465))
location: region:265223-269465:-1
so has part: feature:269324-269465:-1:exon
so has part: feature:269119-269246:-1:exon
so has part: feature:268860-269044:-1:exon
so has part: feature:268065-268216:-1:exon
so has part: feature:267077-267203:-1:exon
so has part: feature:266041-266193:-1:exon
so has part: feature:265223-265679:-1:exon

XP_032057016.1
type: Protein
SIO_000068: ncbiprotein

position:265223:-1
position: 265223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269324-269465:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:269119-269246:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268860-269044:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:268065-268216:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:267077-267203:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:266041-266193:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:265223-265679:-1:exon

MLXIPL
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: MLXIPL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(269854..291170)
location: region:269854-291170:-1
so has part: feature:269854-291170:-1:exon
subclass of: SO_0000010

116497391
type: Gene
SIO_000068: ncbigene

position:269854:-1
position: 269854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291170:-1
position: 291170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269854-291170:-1:exon

MLXIPL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: MLXIPL
product: MLX interacting protein like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 11% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032201126.1
SIO_010081: MLXIPL
subclass of: SO_0000673
so part of: MLXIPL
location: complement(join(269854..269972,270191..270320,271452..271575,271958..272085,272276..272395,272581..272693,273403..273583,274006..274079,274944..275541,275620..275774,280425..280505,281153..281351,281651..281695,282443..282532,282816..282898,283073..283179,290875..291170))
location: region:269854-291170:-1
so has part: feature:290875-291170:-1:exon
so has part: feature:283073-283179:-1:exon
so has part: feature:282816-282898:-1:exon
so has part: feature:282443-282532:-1:exon
so has part: feature:281651-281695:-1:exon
so has part: feature:281153-281351:-1:exon
so has part: feature:280425-280505:-1:exon
so has part: feature:275620-275774:-1:exon
so has part: feature:274944-275541:-1:exon
so has part: feature:274006-274079:-1:exon
so has part: feature:273403-273583:-1:exon
so has part: feature:272581-272693:-1:exon
so has part: feature:272276-272395:-1:exon
so has part: feature:271958-272085:-1:exon
so has part: feature:271452-271575:-1:exon
so has part: feature:270191-270320:-1:exon
so has part: feature:269854-269972:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:290875-291170:-1:exon

position:290875:-1
position: 290875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:283073-283179:-1:exon

position:283073:-1
position: 283073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283179:-1
position: 283179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:282816-282898:-1:exon

position:282816:-1
position: 282816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282898:-1
position: 282898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:282443-282532:-1:exon

position:282443:-1
position: 282443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282532:-1
position: 282532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:281651-281695:-1:exon

position:281651:-1
position: 281651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281695:-1
position: 281695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:281153-281351:-1:exon

position:281153:-1
position: 281153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281351:-1
position: 281351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:280425-280505:-1:exon

position:280425:-1
position: 280425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280505:-1
position: 280505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:275620-275774:-1:exon

position:275620:-1
position: 275620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275774:-1
position: 275774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:274944-275541:-1:exon

position:274944:-1
position: 274944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275541:-1
position: 275541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:274006-274079:-1:exon

position:274006:-1
position: 274006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274079:-1
position: 274079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:273403-273583:-1:exon

position:273403:-1
position: 273403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273583:-1
position: 273583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:272581-272693:-1:exon

position:272581:-1
position: 272581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272693:-1
position: 272693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:272276-272395:-1:exon

position:272276:-1
position: 272276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272395:-1
position: 272395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:271958-272085:-1:exon

position:271958:-1
position: 271958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272085:-1
position: 272085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:271452-271575:-1:exon

position:271452:-1
position: 271452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271575:-1
position: 271575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:270191-270320:-1:exon

position:270191:-1
position: 270191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270320:-1
position: 270320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:269854-269972:-1:exon

position:269972:-1
position: 269972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MLXIPL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: MLXIPL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate-responsive element-binding protein
translation: MAQAQVGLPGPFPEPLVGSCPDSDFDSDSEDATTGGAGPGAGVQKPSQVIHSGHFMVSSPHSDSLPRRRHRHADPEAADPRSIDPTLTRLFECMSLEYSGKLVSPKWKNFKGQRLLCRDKIRLNNAIWRAWYIQYVEQRKNPMCGFITPLEGSEADEHRKPEAVVLEGNYWKRRIEVVMREYHKWRIYYKKRLRKSSREGELSSPKQDEDAWRPTEKWCNQLFCNVVPMLLGNEEEELGGRQHFDLDTFLSDISDTLFTMTQTPSTHQALPEDAYIGNADMIQPDLAPLQPSLDDTMEISDIFISHRPLPAQTQLGYQEPPCFVTMAEPLYGGGGAMPTSPNALLPPSTLLQPGSASQLSLHGAFLSSEQPPPPLAPEPPAAVPGSLSPQLKHKPLLQYNFPGKCVGMEPLGLPYTPPSPSPGPPLLGPEPSFSPTSTPRSKFPYTASPSPSLLAHPVSPLSTPCFAQHTPGIGYAVDMVPPGYSGPAAPQHLPHTTPGSPRFATPKGPSPGGSGRSKAKAGSTKAKRLPGSSIPPHLAVPNPCLTQLLTTAKQEPALDTSPAHGPSLLPASPVSPQSSVPDVPVAFLSRVAQLSPGLSPGSSPSQAVPVPVMLAGAAPGPLLVPKVERLSPTSSCGSDWPKPRQASLGPNAGLGTGISLHHPTSRRGRPESSKIESRRITHISAEQKRRFNIKLGFDTLHSLVSTLSTQPSIKVSKATTLQKTAEYICKLQQERAALQDEAQRLREQIEELNSSINLCQEQLPATGVPITRQRFDQMRSMFDEYIRSSTLQNWKFWIFSIIIRPLFESFNGMVSTASMESLTQTSLAWLDQHCSLPALRPTVLSSLRQLSISTSILSDPARIPEQATRAVTGPPRGSSS
SIO_010081: MLXIPL
subclass of: SO_0000673
so part of: MLXIPL
location: complement(join(269854..269972,270191..270320,271452..271575,271958..272085,272276..272395,272581..272693,273403..273583,274006..274079,274944..275541,275620..275774,280425..280505,281153..281351,281651..281695,282443..282532,282816..282898,283073..283179,290875..291170))
location: region:269854-291170:-1
so has part: feature:290875-291170:-1:exon
so has part: feature:283073-283179:-1:exon
so has part: feature:282816-282898:-1:exon
so has part: feature:282443-282532:-1:exon
so has part: feature:281651-281695:-1:exon
so has part: feature:281153-281351:-1:exon
so has part: feature:280425-280505:-1:exon
so has part: feature:275620-275774:-1:exon
so has part: feature:274944-275541:-1:exon
so has part: feature:274006-274079:-1:exon
so has part: feature:273403-273583:-1:exon
so has part: feature:272581-272693:-1:exon
so has part: feature:272276-272395:-1:exon
so has part: feature:271958-272085:-1:exon
so has part: feature:271452-271575:-1:exon
so has part: feature:270191-270320:-1:exon
so has part: feature:269854-269972:-1:exon

XP_032057017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:290875-291170:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:283073-283179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282816-282898:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:282443-282532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:281651-281695:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:281153-281351:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280425-280505:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:275620-275774:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:274944-275541:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:274006-274079:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:273403-273583:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272581-272693:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:272276-272395:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:271958-272085:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:271452-271575:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:270191-270320:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:269854-269972:-1:exon

BAZ1B
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: BAZ1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 315643..369010
location: region:315643-369010:1
so has part: feature:315643-369010:1:exon
subclass of: SO_0000010

116497336
type: Gene
SIO_000068: ncbigene

position:315643:1
position: 315643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369010:1
position: 369010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315643-369010:1:exon

BAZ1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: BAZ1B
product: bromodomain adjacent to zinc finger domain 1B
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 5 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032201039.1
SIO_010081: BAZ1B
subclass of: SO_0000673
so part of: BAZ1B
location: join(315643..315797,322117..322233,324281..324425,326084..326282,330226..330347,331226..331423,333651..335349,342872..343010,343498..343628,345298..345409,351828..351926,352328..352505,353459..353644,357877..358024,359848..359995,361810..361925,364339..364490,366153..366256,366860..369010)
location: region:315643-369010:1
so has part: feature:315643-315797:1:exon
so has part: feature:322117-322233:1:exon
so has part: feature:324281-324425:1:exon
so has part: feature:326084-326282:1:exon
so has part: feature:330226-330347:1:exon
so has part: feature:331226-331423:1:exon
so has part: feature:333651-335349:1:exon
so has part: feature:342872-343010:1:exon
so has part: feature:343498-343628:1:exon
so has part: feature:345298-345409:1:exon
so has part: feature:351828-351926:1:exon
so has part: feature:352328-352505:1:exon
so has part: feature:353459-353644:1:exon
so has part: feature:357877-358024:1:exon
so has part: feature:359848-359995:1:exon
so has part: feature:361810-361925:1:exon
so has part: feature:364339-364490:1:exon
so has part: feature:366153-366256:1:exon
so has part: feature:366860-369010:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:315643-315797:1:exon

position:315797:1
position: 315797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:322117-322233:1:exon

position:322117:1
position: 322117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322233:1
position: 322233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:324281-324425:1:exon

position:324281:1
position: 324281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324425:1
position: 324425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:326084-326282:1:exon

position:326084:1
position: 326084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326282:1
position: 326282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:330226-330347:1:exon

position:330226:1
position: 330226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330347:1
position: 330347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:331226-331423:1:exon

position:331226:1
position: 331226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331423:1
position: 331423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:333651-335349:1:exon

position:333651:1
position: 333651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335349:1
position: 335349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:342872-343010:1:exon

position:342872:1
position: 342872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343010:1
position: 343010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:343498-343628:1:exon

position:343498:1
position: 343498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343628:1
position: 343628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:345298-345409:1:exon

position:345298:1
position: 345298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345409:1
position: 345409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:351828-351926:1:exon

position:351828:1
position: 351828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351926:1
position: 351926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:352328-352505:1:exon

position:352328:1
position: 352328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352505:1
position: 352505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:353459-353644:1:exon

position:353459:1
position: 353459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353644:1
position: 353644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:357877-358024:1:exon

position:357877:1
position: 357877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358024:1
position: 358024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:359848-359995:1:exon

position:359848:1
position: 359848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359995:1
position: 359995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:361810-361925:1:exon

position:361810:1
position: 361810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361925:1
position: 361925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:364339-364490:1:exon

position:364339:1
position: 364339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364490:1
position: 364490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:366153-366256:1:exon

position:366153:1
position: 366153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366256:1
position: 366256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:366860-369010:1:exon

position:366860:1
position: 366860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BAZ1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: BAZ1B
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 5 bases in 4 codons; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:334295..334297,aa:OTHER)
transl except: (pos:335223..335225,aa:OTHER)
product: LOW QUALITY PROTEIN: tyrosine-protein kinase BAZ1B
translation: MAPLLGRKPFPLAKPLPAGEPGERFIIPHTQEAFRTREEYEARLERYSERIWTCKSTGSSQLTHKEAWEEEQEVAELLKEEFPIWYEKLVLEIVHHNTVSLEKLVDAAWLEIMTKFAVGEECDFEVGKEKMLPVKVVKIHPLEKTDEETSEKKSDGACDSPSSDKENSSQAAQDNQKESILKEDDNRRESMNDRARRSPRKLPTSLKKEERKWVPPKFLPHKYDVKLKNEDKIISNVPADSLVRTERPPNKEILRYFIRHNALRAGTGENAPWVVEDDLVKKYSLPSKFSDFLLDPHKYMTLNTSTKRKSSGSPDRKPSKKSKTDGTSLGQPLSPTLWCHVHLEKSIIGSPLKVKNSKNSKCPKEELEEVMKIMSPGKLGSNFHIPKRSRLGKGSNKSLDKKQRGKRVLNGQKTSGKSKSPRKGLKTPKMKMKQMTLLDMAKGTTKMSRAPRNSGGTPRSSGKPQKHLPPAALHLIAYYKENKDREDKKSALSCIISKTARLLSNEDRARLPXGFRGLVQKRYELLEHRKXWATMTEEQRKEYLKKKREKLKEKLKERAKERKEKEMKEKLEKQKRFEDQDLKGKKLAHFKLVDTPEGLPNTLFGDVAMVVEFLSCYSGLLMPDAQYPITAVSLMEALCAEKGGFLYLNRVLVILLQTLLQDEIAEDYAELGMKLSEIPLTLHSASELVRLCLRKSDVQEESEVSDNVDESKDSATFEDNEVQDEFLEKLETSEFFELTPEEKLQILGALCHRILMTYSVQDHVEAKQQTSAELWKERLAILKEENDKKRAEKQKRKEMVAKSKENGKXENAMGRNEKKKKXNGKIEHRVEIEADDMISAVKSRRLLAIQAKKEREQQERQMRVRMEKEAEEERIRKHKAAAEKTFQDGIAKAKLVMRRTPIGTDRNHNRYWLFSDEVPGLFIEKGWVHDSIDYRFILPHQKKEEVKKDYSPGDKRKSTATDGRGSALHRSVHAVDLPAETTAPKQGQNLWFLCDNQKDLDELLDCLHPQGVRESQLKERLEKRYQDITHSIHLARKQNLGLKSCDGNQELLNYLRSDLIEVATRLQKGGLGYVDVTPEFEARVHSLESLKDFGECVIALQAGVIKKFLQGFMAPKQKRRKHQGEDYIAKAEEIDEDKKMAEEAKVASAMEKWKTAIREAQTFSRMHVLLGMLDACIKWDMSAENARCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEIPDGEWQCPACQPSTARRGSRGRNYTEDSAEDEGEEGEEASDEQDAEEEEEEENYEVAGLKLRPRKAARGKQSTAMYSSRQGRHQRKKQLLHPARGPQQRAAPVNSADIDELVLQTKKTTRRQSLELQKCEEILSKLIKYRFSWPFREPVTTEEAEDYFEVISNPMDFQTMQSKCSCGSYRSVQEFLSDIKQVFSNAECYNQNGSHVLSCLEKTEQCLIDMVHKHLPGHTYARRKRKKLSARCQGLEEQEGDSESEPLEHSRGRKRKK
SIO_010081: BAZ1B
subclass of: SO_0000673
so part of: BAZ1B
location: join(315685..315797,322117..322233,324281..324425,326084..326282,330226..330347,331226..331423,333651..335349,342872..343010,343498..343628,345298..345409,351828..351926,352328..352505,353459..353644,357877..358024,359848..359995,361810..361925,364339..364490,366153..366256,366860..367226)
location: region:315685-367226:1
so has part: feature:315685-315797:1:exon
so has part: feature:322117-322233:1:exon
so has part: feature:324281-324425:1:exon
so has part: feature:326084-326282:1:exon
so has part: feature:330226-330347:1:exon
so has part: feature:331226-331423:1:exon
so has part: feature:333651-335349:1:exon
so has part: feature:342872-343010:1:exon
so has part: feature:343498-343628:1:exon
so has part: feature:345298-345409:1:exon
so has part: feature:351828-351926:1:exon
so has part: feature:352328-352505:1:exon
so has part: feature:353459-353644:1:exon
so has part: feature:357877-358024:1:exon
so has part: feature:359848-359995:1:exon
so has part: feature:361810-361925:1:exon
so has part: feature:364339-364490:1:exon
so has part: feature:366153-366256:1:exon
so has part: feature:366860-367226:1:exon

XP_032056930.1
type: Protein
SIO_000068: ncbiprotein

position:315685:1
position: 315685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367226:1
position: 367226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315685-315797:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322117-322233:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:324281-324425:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326084-326282:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:330226-330347:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:331226-331423:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:333651-335349:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:342872-343010:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:343498-343628:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:345298-345409:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:351828-351926:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:352328-352505:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:353459-353644:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:357877-358024:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:359848-359995:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:361810-361925:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:364339-364490:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:366153-366256:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:366860-367226:1:exon

FZD9
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: FZD9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(373907..375975)
location: region:373907-375975:-1
so has part: feature:373907-375975:-1:exon
subclass of: SO_0000010

116497454
type: Gene
SIO_000068: ncbigene

position:373907:-1
position: 373907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375975:-1
position: 375975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373907-375975:-1:exon

FZD9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: FZD9
product: frizzled class receptor 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032201199.1
SIO_010081: FZD9
subclass of: SO_0000673
so part of: FZD9
location: complement(373907..375975)
location: region:373907-375975:-1
so has part: feature:373907-375975:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:373907-375975:-1:exon

FZD9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: FZD9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: frizzled-9
translation: MAALRLRLALSVLWQLAAAGRGLELGALEAARGRAARCQPVDIPMCRGIGYNLTRMPNLLGHESQREAALKLHEFAPLVEYGCHVHLRFFLCSLYAPMCTDQVSASIPACRPMCEQARHKCVPIMEQFNFGWPESLDCGKLPTKNDPNALCMEAPENASAAEPHKGQGMLPVAPRPWPPGTAEGRGPDGLGACDNPEKFQYVEKSLSCAPRCSPGVDVYWSREDKDFAFIWMAVWSTLCFVSTAFTVLTFLLDPHRFQYPERPIIFLSMCYNVYSVAFIIRSVAGAENIACDRENGELYIIQEGLESTGCTIVFLILYYFGMASSLWWVILTLTWFLAAGKKWGHEAIEAHSSYFHMAAWGIPALKTIIILTMRKVAGDELTGLCYVGSMDVSALTGFVLIPLSCYLVIGTSFILTGFVALFHIRKIMKTGGTNTEKLEKLMVKIGVFSILYTVPATCVIVCYFYERLNMDYWNLRALERGCVPLPGRRAANCSLETSVPTVAVFMLKIFMSLVVGITSGVWVWSSKTLQTWQSLCNRKLGMRTRGKPCSGVSCSGVHCHYKAPTVMLHMTKTDPYLDNPTHV
SIO_010081: FZD9
subclass of: SO_0000673
so part of: FZD9
location: complement(374224..375975)
location: region:374224-375975:-1
so has part: feature:374224-375975:-1:exon

XP_032057090.1
type: Protein
SIO_000068: ncbiprotein

position:374224:-1
position: 374224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374224-375975:-1:exon

FKBP6
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: FKBP6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(394474..414536)
location: region:394474-414536:-1
so has part: feature:394474-414536:-1:exon
subclass of: SO_0000010

116497393
type: Gene
SIO_000068: ncbigene

position:394474:-1
position: 394474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414536:-1
position: 414536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394474-414536:-1:exon

FKBP6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: FKBP6
product: FKBP prolyl isomerase 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032201127.1
SIO_010081: FKBP6
subclass of: SO_0000673
so part of: FKBP6
location: complement(join(394474..394851,406672..406760,409433..409542,409850..410044,411086..411205,412502..412704,413274..413363,414371..414536))
location: region:394474-414536:-1
so has part: feature:414371-414536:-1:exon
so has part: feature:413274-413363:-1:exon
so has part: feature:412502-412704:-1:exon
so has part: feature:411086-411205:-1:exon
so has part: feature:409850-410044:-1:exon
so has part: feature:409433-409542:-1:exon
so has part: feature:406672-406760:-1:exon
so has part: feature:394474-394851:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:414371-414536:-1:exon

position:414371:-1
position: 414371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:413274-413363:-1:exon

position:413274:-1
position: 413274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413363:-1
position: 413363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:412502-412704:-1:exon

position:412502:-1
position: 412502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412704:-1
position: 412704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:411086-411205:-1:exon

position:411086:-1
position: 411086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411205:-1
position: 411205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:409850-410044:-1:exon

position:409850:-1
position: 409850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410044:-1
position: 410044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:409433-409542:-1:exon

position:409433:-1
position: 409433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409542:-1
position: 409542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:406672-406760:-1:exon

position:406672:-1
position: 406672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406760:-1
position: 406760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:394474-394851:-1:exon

position:394851:-1
position: 394851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FKBP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: FKBP6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive peptidyl-prolyl cis-trans isomerase FKBP6
translation: MQGGGGGAWAGLGARPRRWGPWARGLQDLSGDGGVRKEELRPGTGQPAPPAATVAVKYSGYLEHADEPFCTNCTTKLPRLMKLGEDITLRGLEIGLLTMKKGEVARFVFTPVYAYGQQGCPPLIPPNATVLFEVEMLDFLDSADSDAFFALTAEQQDTFPLQKVLKVADTEREFGNYLYRKQCFEGAKERYKRAYSILGRSPSSVAEQCQIDASKLLVLLNLSVTYLKLEHPDRALMYGEKALEIDHRNTKALFRCGQACLCMTEYKKARDFLVRAQQIEPFNNDINNELKKLASCYKDYMEKEKEMCCRMLASLNSSHA
SIO_010081: FKBP6
subclass of: SO_0000673
so part of: FKBP6
location: complement(join(406682..406760,409433..409542,409850..410044,411086..411205,412502..412704,413274..413363,414371..414536))
location: region:406682-414536:-1
so has part: feature:414371-414536:-1:exon
so has part: feature:413274-413363:-1:exon
so has part: feature:412502-412704:-1:exon
so has part: feature:411086-411205:-1:exon
so has part: feature:409850-410044:-1:exon
so has part: feature:409433-409542:-1:exon
so has part: feature:406682-406760:-1:exon

XP_032057018.1
type: Protein
SIO_000068: ncbiprotein

position:406682:-1
position: 406682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414371-414536:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413274-413363:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:412502-412704:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:411086-411205:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409850-410044:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:409433-409542:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:406682-406760:-1:exon

TRIM50
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRIM50
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 415500..421124
location: region:415500-421124:1
so has part: feature:415500-421124:1:exon
subclass of: SO_0000010

116497394
type: Gene
SIO_000068: ncbigene

position:415500:1
position: 415500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421124:1
position: 421124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415500-421124:1:exon

TRIM50
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: TRIM50
product: tripartite motif containing 50
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 5 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 82% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032201128.1
SIO_010081: TRIM50
subclass of: SO_0000673
so part of: TRIM50
location: join(415500..415625,416911..417350,418239..418334,419195..419424,419742..419764,420059..420184,420515..421124)
location: region:415500-421124:1
so has part: feature:415500-415625:1:exon
so has part: feature:416911-417350:1:exon
so has part: feature:418239-418334:1:exon
so has part: feature:419195-419424:1:exon
so has part: feature:419742-419764:1:exon
so has part: feature:420059-420184:1:exon
so has part: feature:420515-421124:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:415500-415625:1:exon

position:415625:1
position: 415625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:416911-417350:1:exon

position:416911:1
position: 416911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417350:1
position: 417350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:418239-418334:1:exon

position:418239:1
position: 418239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418334:1
position: 418334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:419195-419424:1:exon

position:419195:1
position: 419195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419424:1
position: 419424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:419742-419764:1:exon

position:419742:1
position: 419742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419764:1
position: 419764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:420059-420184:1:exon

position:420059:1
position: 420059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420184:1
position: 420184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:420515-421124:1:exon

position:420515:1
position: 420515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRIM50
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: TRIM50
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 5 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM50
translation: MLKGGSMARRMSIDELEDQLLCPICLEVFKEPLMLQCGHSYCKSCVVSLSGELDGQFLCPVCRQTVDCSASPPNVTLARVIEALQSRGEAEPTPESCPTHHNPLSLFCETDQEVICGLCGTIGNHRQHKITPISTTYCRMKEELSVLLTDVHQYKRNLDEHFSKLINNKSRIANEADVFKWVIRKEFQELHRYIDEEKATFLESVEGKAXQLITSIESQVKQTSDALQRLKKIHSSLEMLSNESQLDFIRKYSSSQFRSELPSLLPGDGIFSPISFKPCFHQDDIKMTVWKRLHRHVLPAPEMLKLDPVTAHPLLELYKGDTVVQCGLYQRRDSNPKRFDSSSCILXCKGFSCGQHYWEVIVGTRSHWRVGIIKGTVSRKGKLSKSPENGVWLIGLKEGKVTRPFSTPRAILPLTARPQRIGIYLHYERGELTFYNADSPDRAQPHLHLQAEFQGQLYPIVDLCWPERGPYSXPIILPTPGATRRPQGPCRQPVPEAPAEP
SIO_010081: TRIM50
subclass of: SO_0000673
so part of: TRIM50
location: join(416928..417350,418239..418334,419195..419424,419742..419764,420059..420184,420515..421124)
location: region:416928-421124:1
so has part: feature:416928-417350:1:exon
so has part: feature:418239-418334:1:exon
so has part: feature:419195-419424:1:exon
so has part: feature:419742-419764:1:exon
so has part: feature:420059-420184:1:exon
so has part: feature:420515-421124:1:exon

XP_032057019.1
type: Protein
SIO_000068: ncbiprotein

position:416928:1
position: 416928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416928-417350:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:418239-418334:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419195-419424:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419742-419764:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420059-420184:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420515-421124:1:exon

NSUN5
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: NSUN5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 421539..426624
location: region:421539-426624:1
so has part: feature:421539-426624:1:exon
subclass of: SO_0000010

116497225
type: Gene
SIO_000068: ncbigene

position:421539:1
position: 421539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426624:1
position: 426624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421539-426624:1:exon

NSUN5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: NSUN5
product: NOP2/Sun RNA methyltransferase 5
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 6 bases in 6 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 74% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032200870.1
SIO_010081: NSUN5
subclass of: SO_0000673
so part of: NSUN5
location: join(421539..421631,421759..421881,421968..422328,422634..422773,423183..423310,423684..423859,423949..424159,424275..424422,424580..424676,426144..426624)
location: region:421539-426624:1
so has part: feature:421539-421631:1:exon
so has part: feature:421759-421881:1:exon
so has part: feature:421968-422328:1:exon
so has part: feature:422634-422773:1:exon
so has part: feature:423183-423310:1:exon
so has part: feature:423684-423859:1:exon
so has part: feature:423949-424159:1:exon
so has part: feature:424275-424422:1:exon
so has part: feature:424580-424676:1:exon
so has part: feature:426144-426624:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:421539-421631:1:exon

position:421631:1
position: 421631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:421759-421881:1:exon

position:421759:1
position: 421759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421881:1
position: 421881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:421968-422328:1:exon

position:421968:1
position: 421968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422328:1
position: 422328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:422634-422773:1:exon

position:422634:1
position: 422634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422773:1
position: 422773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:423183-423310:1:exon

position:423183:1
position: 423183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423310:1
position: 423310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:423684-423859:1:exon

position:423684:1
position: 423684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423859:1
position: 423859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:423949-424159:1:exon

position:423949:1
position: 423949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424159:1
position: 424159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:424275-424422:1:exon

position:424275:1
position: 424275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424422:1
position: 424422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:424580-424676:1:exon

position:424580:1
position: 424580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424676:1
position: 424676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:426144-426624:1:exon

position:426144:1
position: 426144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NSUN5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: NSUN5
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 6 bases in 6 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:423298..423300,aa:OTHER)
product: LOW QUALITY PROTEIN: probable 28S rRNA (cytosine-C(5))-methyltransferase
translation: MALYGAAAAVLSGLERGEGGLSGLVYGSRFPHTRQLYALVAETLRYSPVLEALLDGAALLRAERRLPLPLAKVLVYDLLFGKGLKCGGRWKALVRRHRARLEAELARLKVRRGVSRNEELLAPGPGAGPGGERGGGWALPAAAGPGLTPPPWAPQPRVSPRYVRVNTLKTRVDDVVDFFKRQGYSFLGKAGSMEELRTLSGKKFLLDLHLPELLVFPPQTDFHDNRLYTSGQHHSAGQASCLPAFLLRPGASXHVIDACAXPGNKTSHLAAILKNKGXVQADFAFDLDAKRLATMNTMLKRAGVTSFKLAQQDFLTVDSHDPKYSKVPYILLDPSCSGSGMVNRLPVEEAAPSAERLQALAGFQRRVLSHALSFPAVQRLAYSTCSVHREENEDVVQAVLQEQGLSLQVLNVFPSWPGRGLPTFPGAECCLRASPEATLTQGFFVAVLERCRDQAAVPSSLPASAEESLQQGEEMEPGAAPPKKRRRKKQRMLSTPPPALAAVTL
SIO_010081: NSUN5
subclass of: SO_0000673
so part of: NSUN5
location: join(421539..421631,421759..421881,421968..422328,422634..422773,423183..423310,423684..423859,423949..424159,424275..424422,424580..424676,426144..426188)
location: region:421539-426188:1
so has part: feature:421539-421631:1:exon
so has part: feature:421759-421881:1:exon
so has part: feature:421968-422328:1:exon
so has part: feature:422634-422773:1:exon
so has part: feature:423183-423310:1:exon
so has part: feature:423684-423859:1:exon
so has part: feature:423949-424159:1:exon
so has part: feature:424275-424422:1:exon
so has part: feature:424580-424676:1:exon
so has part: feature:426144-426188:1:exon

XP_032056761.1
type: Protein
SIO_000068: ncbiprotein

position:426188:1
position: 426188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421539-421631:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:421759-421881:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421968-422328:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422634-422773:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:423183-423310:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:423684-423859:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:423949-424159:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:424275-424422:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:424580-424676:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:426144-426188:1:exon

POM121
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: POM121
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(428182..439864)
location: region:428182-439864:-1
so has part: feature:428182-439864:-1:exon
subclass of: SO_0000010

116497395
type: Gene
SIO_000068: ncbigene

position:428182:-1
position: 428182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439864:-1
position: 439864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428182-439864:-1:exon

POM121
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: POM121
product: POM121 transmembrane nucleoporin
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; deleted 7 bases in 6 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032201129.1
SIO_010081: POM121
subclass of: SO_0000673
so part of: POM121
location: complement(join(428182..428402,428631..428763,430190..431865,432168..432351,432625..432727,433127..433251,434414..434484,435395..435486,436543..436714,437049..437129,439032..439193,439481..439683,439805..439864))
location: region:428182-439864:-1
so has part: feature:439805-439864:-1:exon
so has part: feature:439481-439683:-1:exon
so has part: feature:439032-439193:-1:exon
so has part: feature:437049-437129:-1:exon
so has part: feature:436543-436714:-1:exon
so has part: feature:435395-435486:-1:exon
so has part: feature:434414-434484:-1:exon
so has part: feature:433127-433251:-1:exon
so has part: feature:432625-432727:-1:exon
so has part: feature:432168-432351:-1:exon
so has part: feature:430190-431865:-1:exon
so has part: feature:428631-428763:-1:exon
so has part: feature:428182-428402:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:439805-439864:-1:exon

position:439805:-1
position: 439805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:439481-439683:-1:exon

position:439481:-1
position: 439481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439683:-1
position: 439683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:439032-439193:-1:exon

position:439032:-1
position: 439032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439193:-1
position: 439193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:437049-437129:-1:exon

position:437049:-1
position: 437049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437129:-1
position: 437129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:436543-436714:-1:exon

position:436543:-1
position: 436543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436714:-1
position: 436714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:435395-435486:-1:exon

position:435395:-1
position: 435395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435486:-1
position: 435486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:434414-434484:-1:exon

position:434414:-1
position: 434414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434484:-1
position: 434484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:433127-433251:-1:exon

position:433127:-1
position: 433127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433251:-1
position: 433251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:432625-432727:-1:exon

position:432625:-1
position: 432625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432727:-1
position: 432727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:432168-432351:-1:exon

position:432168:-1
position: 432168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432351:-1
position: 432351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:430190-431865:-1:exon

position:430190:-1
position: 430190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431865:-1
position: 431865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:428631-428763:-1:exon

position:428631:-1
position: 428631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428763:-1
position: 428763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:428182-428402:-1:exon

position:428402:-1
position: 428402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POM121
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: POM121
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; deleted 7 bases in 6 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(431771..431773),aa:OTHER)
product: LOW QUALITY PROTEIN: nuclear envelope pore membrane protein POM 121
translation: MRPGPPAKAAANGGRRRLGPDPAALPAAGAAPPYPLPQARSAVPGACPPPAGTPAAEGARPGRAAPARPAAPVTVRIARPGGLARSPALEQLTSPVAFLANSSPDPCAKETVLNAIKESRKRAVEEEEEDQVLGNDQESKRRRHDSSGSGQSAFEPLVANGVPASLIPKPGSLKRGLVSHCPDDCSNKRSRTSSMSSLNNTYAGGIPSSIRNAIASSYSSSRGLSQLWKRSGVSISPLSSPASSRPQTPEWPLRKAREEESHRSNTSTPVKSDKELQTEKVVETPMRKKRNSLSPPSVSGSSGKRKRKIQLLSSRRGDQLALPPPPQLGYSITSEDLDAEKKAALQWFNKVLEDKADPVPSTTAETTPVSRPLAFTVTMVTSPGPVPASIAPVLPSSNSLLDSLKKMQSSQAAPMTADSTGAVIGSQPSSSASQPPAAAVSLELSSLLXPAADTKPVPVLSTPVLSAPPASGAQPPSSVAPAFTELGQTPVKPLSLPKPNILFGMLSTPPASQPATTTATAVPTTAPVFKTHLRCFAKNESTAPCTAVISSAVTVSASSGPSSTSSTATMFKPIFGSVTAALSPAKASPFTFKPLSQTASAADLPAASTTTTAGFTGLPNVIFTTAATTATTLSSSTDATIKPVFSFGLNPPASTGPTASLTVTTATSTSTSQPFLFGGLASSATSTDSSFAAPGPVFQFGKPTPATVTATTSVPGGPTFGQAASNSMAPTTTVGFSIFGSTTLSSSTPATTGQSALTFGSSISAFGSSFSTSAKPPPPYPGAASQPAFSTGAAESQLPTSKPAAGPISFGPTFSFGAPTAQSTTQPAFGSSAQPAFGTGGTQSAFGTSSTQAVFGTTTSVFSFGTATSTTVSFGSSTQTTSSTLAXSRLGTTPSPFTFGQLPSQALCQCLWLSVPTLNSGSPAIAFNFGAGQSGAAAAATPFGSSLTQSTLGAQNQNTPFAFTVPSXPDTKPVFGGTPAPTFGKARPVPGAVGSGSSSLSFGTPSTPASAFGGVGTSFGPSTPSFSIGAGSKTGARQRLQARRQHTRKSNLWGYQVPVAGLCKEHLRQHTHEGLWSGAVPVVGAVVTGPGP
SIO_010081: POM121
subclass of: SO_0000673
so part of: POM121
location: complement(join(428182..428402,428631..428763,430190..431865,432168..432351,432625..432727,433127..433251,434414..434484,435395..435486,436543..436714,437049..437129,439032..439193,439481..439683,439805..439864))
location: region:428182-439864:-1
so has part: feature:439805-439864:-1:exon
so has part: feature:439481-439683:-1:exon
so has part: feature:439032-439193:-1:exon
so has part: feature:437049-437129:-1:exon
so has part: feature:436543-436714:-1:exon
so has part: feature:435395-435486:-1:exon
so has part: feature:434414-434484:-1:exon
so has part: feature:433127-433251:-1:exon
so has part: feature:432625-432727:-1:exon
so has part: feature:432168-432351:-1:exon
so has part: feature:430190-431865:-1:exon
so has part: feature:428631-428763:-1:exon
so has part: feature:428182-428402:-1:exon

XP_032057020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439805-439864:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:439481-439683:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:439032-439193:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:437049-437129:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:436543-436714:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:435395-435486:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:434414-434484:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:433127-433251:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:432625-432727:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:432168-432351:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:430190-431865:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:428631-428763:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:428182-428402:-1:exon

HIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: HIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(442465..490614)
location: region:442465-490614:-1
so has part: feature:442465-490614:-1:exon
subclass of: SO_0000010

116497234
type: Gene
SIO_000068: ncbigene

position:442465:-1
position: 442465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490614:-1
position: 490614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442465-490614:-1:exon

HIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: HIP1
product: huntingtin interacting protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032200891.1
SIO_010081: HIP1
subclass of: SO_0000673
so part of: HIP1
location: complement(join(442465..442493,442936..443047,443547..443608,443800..443923,444115..444220,444347..444447,444824..444917,445145..445203,445353..445463,445589..445725,445815..445922,446128..446214,446361..446508,446783..446977,448650..448751,448917..449033,449108..449196,449273..449456,449852..449924,450291..450388,451027..451158,451555..451630,453836..453893,454225..454365,456246..456307,456557..456633,459069..459149,460419..460475,461197..461339,462031..462094,490465..490614))
location: region:442465-490614:-1
so has part: feature:490465-490614:-1:exon
so has part: feature:462031-462094:-1:exon
so has part: feature:461197-461339:-1:exon
so has part: feature:460419-460475:-1:exon
so has part: feature:459069-459149:-1:exon
so has part: feature:456557-456633:-1:exon
so has part: feature:456246-456307:-1:exon
so has part: feature:454225-454365:-1:exon
so has part: feature:453836-453893:-1:exon
so has part: feature:451555-451630:-1:exon
so has part: feature:451027-451158:-1:exon
so has part: feature:450291-450388:-1:exon
so has part: feature:449852-449924:-1:exon
so has part: feature:449273-449456:-1:exon
so has part: feature:449108-449196:-1:exon
so has part: feature:448917-449033:-1:exon
so has part: feature:448650-448751:-1:exon
so has part: feature:446783-446977:-1:exon
so has part: feature:446361-446508:-1:exon
so has part: feature:446128-446214:-1:exon
so has part: feature:445815-445922:-1:exon
so has part: feature:445589-445725:-1:exon
so has part: feature:445353-445463:-1:exon
so has part: feature:445145-445203:-1:exon
so has part: feature:444824-444917:-1:exon
so has part: feature:444347-444447:-1:exon
so has part: feature:444115-444220:-1:exon
so has part: feature:443800-443923:-1:exon
so has part: feature:443547-443608:-1:exon
so has part: feature:442936-443047:-1:exon
so has part: feature:442465-442493:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:490465-490614:-1:exon

position:490465:-1
position: 490465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:462031-462094:-1:exon

position:462031:-1
position: 462031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462094:-1
position: 462094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:461197-461339:-1:exon

position:461197:-1
position: 461197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461339:-1
position: 461339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:460419-460475:-1:exon

position:460419:-1
position: 460419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460475:-1
position: 460475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:459069-459149:-1:exon

position:459069:-1
position: 459069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459149:-1
position: 459149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:456557-456633:-1:exon

position:456557:-1
position: 456557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456633:-1
position: 456633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:456246-456307:-1:exon

position:456246:-1
position: 456246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456307:-1
position: 456307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:454225-454365:-1:exon

position:454225:-1
position: 454225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454365:-1
position: 454365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:453836-453893:-1:exon

position:453836:-1
position: 453836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453893:-1
position: 453893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:451555-451630:-1:exon

position:451555:-1
position: 451555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451630:-1
position: 451630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:451027-451158:-1:exon

position:451027:-1
position: 451027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451158:-1
position: 451158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:450291-450388:-1:exon

position:450291:-1
position: 450291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450388:-1
position: 450388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:449852-449924:-1:exon

position:449852:-1
position: 449852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449924:-1
position: 449924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:449273-449456:-1:exon

position:449273:-1
position: 449273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449456:-1
position: 449456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:449108-449196:-1:exon

position:449108:-1
position: 449108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449196:-1
position: 449196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:448917-449033:-1:exon

position:448917:-1
position: 448917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449033:-1
position: 449033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:448650-448751:-1:exon

position:448650:-1
position: 448650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448751:-1
position: 448751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:446783-446977:-1:exon

position:446783:-1
position: 446783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446977:-1
position: 446977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:446361-446508:-1:exon

position:446361:-1
position: 446361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446508:-1
position: 446508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:446128-446214:-1:exon

position:446128:-1
position: 446128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446214:-1
position: 446214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:445815-445922:-1:exon

position:445815:-1
position: 445815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445922:-1
position: 445922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:445589-445725:-1:exon

position:445589:-1
position: 445589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445725:-1
position: 445725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:445353-445463:-1:exon

position:445353:-1
position: 445353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445463:-1
position: 445463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:445145-445203:-1:exon

position:445145:-1
position: 445145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445203:-1
position: 445203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:444824-444917:-1:exon

position:444824:-1
position: 444824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444917:-1
position: 444917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:444347-444447:-1:exon

position:444347:-1
position: 444347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444447:-1
position: 444447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:444115-444220:-1:exon

position:444115:-1
position: 444115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444220:-1
position: 444220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:443800-443923:-1:exon

position:443800:-1
position: 443800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443923:-1
position: 443923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:443547-443608:-1:exon

position:443547:-1
position: 443547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443608:-1
position: 443608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:442936-443047:-1:exon

position:442936:-1
position: 442936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443047:-1
position: 443047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:442465-442493:-1:exon

position:442493:-1
position: 442493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: HIP1
product: huntingtin interacting protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032200892.1
SIO_010081: HIP1
subclass of: SO_0000673
so part of: HIP1
location: complement(join(442465..442493,442936..443047,443547..443608,443800..443923,444115..444220,444347..444447,444824..444917,445145..445203,445353..445463,445589..445725,445815..445922,446128..446214,446361..446508,446783..446977,448650..448751,448917..449033,449108..449196,449273..449456,449852..449924,450291..450388,451027..451158,451555..451630,453836..453893,454225..454365,456246..456307,456557..456633,459069..459149,460419..460475,461197..461339,462031..462094,470152..470265))
location: region:442465-470265:-1
so has part: feature:470152-470265:-1:exon
so has part: feature:462031-462094:-1:exon
so has part: feature:461197-461339:-1:exon
so has part: feature:460419-460475:-1:exon
so has part: feature:459069-459149:-1:exon
so has part: feature:456557-456633:-1:exon
so has part: feature:456246-456307:-1:exon
so has part: feature:454225-454365:-1:exon
so has part: feature:453836-453893:-1:exon
so has part: feature:451555-451630:-1:exon
so has part: feature:451027-451158:-1:exon
so has part: feature:450291-450388:-1:exon
so has part: feature:449852-449924:-1:exon
so has part: feature:449273-449456:-1:exon
so has part: feature:449108-449196:-1:exon
so has part: feature:448917-449033:-1:exon
so has part: feature:448650-448751:-1:exon
so has part: feature:446783-446977:-1:exon
so has part: feature:446361-446508:-1:exon
so has part: feature:446128-446214:-1:exon
so has part: feature:445815-445922:-1:exon
so has part: feature:445589-445725:-1:exon
so has part: feature:445353-445463:-1:exon
so has part: feature:445145-445203:-1:exon
so has part: feature:444824-444917:-1:exon
so has part: feature:444347-444447:-1:exon
so has part: feature:444115-444220:-1:exon
so has part: feature:443800-443923:-1:exon
so has part: feature:443547-443608:-1:exon
so has part: feature:442936-443047:-1:exon
so has part: feature:442465-442493:-1:exon

position:470265:-1
position: 470265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470152-470265:-1:exon

position:470152:-1
position: 470152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:462031-462094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:461197-461339:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:460419-460475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:459069-459149:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:456557-456633:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:456246-456307:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:454225-454365:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:453836-453893:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:451555-451630:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:451027-451158:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:450291-450388:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:449852-449924:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:449273-449456:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:449108-449196:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:448917-449033:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:448650-448751:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:446783-446977:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:446361-446508:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:446128-446214:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:445815-445922:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:445589-445725:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:445353-445463:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:445145-445203:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:444824-444917:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:444347-444447:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:444115-444220:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:443800-443923:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:443547-443608:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:442936-443047:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:442465-442493:-1:exon

HIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: HIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: huntingtin-interacting protein 1 isoform X1
translation: MDRVSSSMKQAGNPLPKVLGRRAAGGGLEAERESFERAQTVSINKAINTQEVAVKEKHARTCILGTHHEKGAQTFWSVVNRLPLSGNAVLCWKFCHVFHKLLRDGHSNVLKDSVRYKNELSDMSRMWGHLSEGYGQLCSIYLKLLRTKMEFHTKNPRFPGNLQMSDRQLDEAGESDVNNFFQLTVEMFDYLECELNLFQTVFSSLDMSRSVSVTAAGQCRLAPLIQVILDCSHLYDYTVKLLFKLHSCLPADTLQGHRDRFLEQFRKLKDLFYRSSNLQYFKRLIQIPQLPENPPNFLRASALSEHISPVVVIPAEASSPDSEPITDLVEMETASQSLFDNKFDDIFGSSLSSDPFNFNSQNGMNKDDKDRLIEQLYGEIRTLKEELESFKAENERRTLQLRGRISELEAELAEQRHLKQQALDESEFLRTELEELKKQREDTEKAQRSLTEIERRAQANEQRYSKLKEKYSELVQNHADLLRKNADVTKQVTVARQAQGDVEREKKELEDSFQRVSEQAQRKSQEQAEVLEMLKQELAASKQELQVLQGTLESSTQVGAEQSTRIADLEQERDSLSRAAERYGEEIAALQAELQQLQDTLSSEKESSKKELETLQTQLQDKESMEQMLQQRLAKEQFALLQGSAREAERMVQDALSRLEDPAHISCTGSADYLLSRTLAASECTERLQDAHRKYLSNHTDVSSLLPCVALFAHLISDTILQGSATSHMAPVEPADRLLEMCKQCGSEAMSYLSSLQDLDSVEGADCAAVTSCLGRISAIGEELRPRGLDVEQEELGDLVDKEMAATSAAIETAAARIEEMLSKARAGDTGVKLEVNERILGSCTGLMQAIQVLVLASKDLQREIVESGRGAASPKEFYAKNSRWTEGLISASKAVGWGATVMVDAADLVVQGKGKFEELMVCSHEIAASTAQLVAASKVKADKDSANLAKLQQASRGVNQATAGVVASTKSGKSQIEEKDSMDFSSMTLTQIKRQEMDSQVRVLELENQLQKERQKLGELRKKHYELAGVAEGWEEDATD
SIO_010081: HIP1
subclass of: SO_0000673
so part of: HIP1
location: complement(join(442483..442493,442936..443047,443547..443608,443800..443923,444115..444220,444347..444447,444824..444917,445145..445203,445353..445463,445589..445725,445815..445922,446128..446214,446361..446508,446783..446977,448650..448751,448917..449033,449108..449196,449273..449456,449852..449924,450291..450388,451027..451158,451555..451630,453836..453893,454225..454365,456246..456307,456557..456633,459069..459149,460419..460475,461197..461339,462031..462094,490465..490581))
location: region:442483-490581:-1
so has part: feature:490465-490581:-1:exon
so has part: feature:462031-462094:-1:exon
so has part: feature:461197-461339:-1:exon
so has part: feature:460419-460475:-1:exon
so has part: feature:459069-459149:-1:exon
so has part: feature:456557-456633:-1:exon
so has part: feature:456246-456307:-1:exon
so has part: feature:454225-454365:-1:exon
so has part: feature:453836-453893:-1:exon
so has part: feature:451555-451630:-1:exon
so has part: feature:451027-451158:-1:exon
so has part: feature:450291-450388:-1:exon
so has part: feature:449852-449924:-1:exon
so has part: feature:449273-449456:-1:exon
so has part: feature:449108-449196:-1:exon
so has part: feature:448917-449033:-1:exon
so has part: feature:448650-448751:-1:exon
so has part: feature:446783-446977:-1:exon
so has part: feature:446361-446508:-1:exon
so has part: feature:446128-446214:-1:exon
so has part: feature:445815-445922:-1:exon
so has part: feature:445589-445725:-1:exon
so has part: feature:445353-445463:-1:exon
so has part: feature:445145-445203:-1:exon
so has part: feature:444824-444917:-1:exon
so has part: feature:444347-444447:-1:exon
so has part: feature:444115-444220:-1:exon
so has part: feature:443800-443923:-1:exon
so has part: feature:443547-443608:-1:exon
so has part: feature:442936-443047:-1:exon
so has part: feature:442483-442493:-1:exon

XP_032056782.1
type: Protein
SIO_000068: ncbiprotein

position:442483:-1
position: 442483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490581:-1
position: 490581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490465-490581:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:462031-462094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:461197-461339:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:460419-460475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:459069-459149:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:456557-456633:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:456246-456307:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:454225-454365:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:453836-453893:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:451555-451630:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:451027-451158:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:450291-450388:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:449852-449924:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:449273-449456:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:449108-449196:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:448917-449033:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:448650-448751:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:446783-446977:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:446361-446508:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:446128-446214:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:445815-445922:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:445589-445725:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:445353-445463:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:445145-445203:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:444824-444917:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:444347-444447:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:444115-444220:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:443800-443923:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:443547-443608:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:442936-443047:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:442483-442493:-1:exon

HIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: HIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: huntingtin-interacting protein 1 isoform X2
translation: MTVSINKAINTQEVAVKEKHARTCILGTHHEKGAQTFWSVVNRLPLSGNAVLCWKFCHVFHKLLRDGHSNVLKDSVRYKNELSDMSRMWGHLSEGYGQLCSIYLKLLRTKMEFHTKNPRFPGNLQMSDRQLDEAGESDVNNFFQLTVEMFDYLECELNLFQTVFSSLDMSRSVSVTAAGQCRLAPLIQVILDCSHLYDYTVKLLFKLHSCLPADTLQGHRDRFLEQFRKLKDLFYRSSNLQYFKRLIQIPQLPENPPNFLRASALSEHISPVVVIPAEASSPDSEPITDLVEMETASQSLFDNKFDDIFGSSLSSDPFNFNSQNGMNKDDKDRLIEQLYGEIRTLKEELESFKAENERRTLQLRGRISELEAELAEQRHLKQQALDESEFLRTELEELKKQREDTEKAQRSLTEIERRAQANEQRYSKLKEKYSELVQNHADLLRKNADVTKQVTVARQAQGDVEREKKELEDSFQRVSEQAQRKSQEQAEVLEMLKQELAASKQELQVLQGTLESSTQVGAEQSTRIADLEQERDSLSRAAERYGEEIAALQAELQQLQDTLSSEKESSKKELETLQTQLQDKESMEQMLQQRLAKEQFALLQGSAREAERMVQDALSRLEDPAHISCTGSADYLLSRTLAASECTERLQDAHRKYLSNHTDVSSLLPCVALFAHLISDTILQGSATSHMAPVEPADRLLEMCKQCGSEAMSYLSSLQDLDSVEGADCAAVTSCLGRISAIGEELRPRGLDVEQEELGDLVDKEMAATSAAIETAAARIEEMLSKARAGDTGVKLEVNERILGSCTGLMQAIQVLVLASKDLQREIVESGRGAASPKEFYAKNSRWTEGLISASKAVGWGATVMVDAADLVVQGKGKFEELMVCSHEIAASTAQLVAASKVKADKDSANLAKLQQASRGVNQATAGVVASTKSGKSQIEEKDSMDFSSMTLTQIKRQEMDSQVRVLELENQLQKERQKLGELRKKHYELAGVAEGWEEDATD
SIO_010081: HIP1
subclass of: SO_0000673
so part of: HIP1
location: complement(join(442483..442493,442936..443047,443547..443608,443800..443923,444115..444220,444347..444447,444824..444917,445145..445203,445353..445463,445589..445725,445815..445922,446128..446214,446361..446508,446783..446977,448650..448751,448917..449033,449108..449196,449273..449456,449852..449924,450291..450388,451027..451158,451555..451630,453836..453893,454225..454365,456246..456307,456557..456633,459069..459149,460419..460475,461197..461339,462031..462094,470152..470154))
location: region:442483-470154:-1
so has part: feature:470152-470154:-1:exon
so has part: feature:462031-462094:-1:exon
so has part: feature:461197-461339:-1:exon
so has part: feature:460419-460475:-1:exon
so has part: feature:459069-459149:-1:exon
so has part: feature:456557-456633:-1:exon
so has part: feature:456246-456307:-1:exon
so has part: feature:454225-454365:-1:exon
so has part: feature:453836-453893:-1:exon
so has part: feature:451555-451630:-1:exon
so has part: feature:451027-451158:-1:exon
so has part: feature:450291-450388:-1:exon
so has part: feature:449852-449924:-1:exon
so has part: feature:449273-449456:-1:exon
so has part: feature:449108-449196:-1:exon
so has part: feature:448917-449033:-1:exon
so has part: feature:448650-448751:-1:exon
so has part: feature:446783-446977:-1:exon
so has part: feature:446361-446508:-1:exon
so has part: feature:446128-446214:-1:exon
so has part: feature:445815-445922:-1:exon
so has part: feature:445589-445725:-1:exon
so has part: feature:445353-445463:-1:exon
so has part: feature:445145-445203:-1:exon
so has part: feature:444824-444917:-1:exon
so has part: feature:444347-444447:-1:exon
so has part: feature:444115-444220:-1:exon
so has part: feature:443800-443923:-1:exon
so has part: feature:443547-443608:-1:exon
so has part: feature:442936-443047:-1:exon
so has part: feature:442483-442493:-1:exon

XP_032056783.1
type: Protein
SIO_000068: ncbiprotein

position:470154:-1
position: 470154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470152-470154:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:462031-462094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:461197-461339:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:460419-460475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:459069-459149:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:456557-456633:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:456246-456307:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:454225-454365:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:453836-453893:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:451555-451630:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:451027-451158:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:450291-450388:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:449852-449924:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:449273-449456:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:449108-449196:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:448917-449033:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:448650-448751:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:446783-446977:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:446361-446508:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:446128-446214:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:445815-445922:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:445589-445725:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:445353-445463:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:445145-445203:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:444824-444917:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:444347-444447:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:444115-444220:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:443800-443923:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:443547-443608:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:442936-443047:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:442483-442493:-1:exon

LOC116497230
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116497230
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 499181..500178
location: region:499181-500178:1
so has part: feature:499181-500178:1:exon
subclass of: SO_0000010

116497230
type: Gene
SIO_000068: ncbigene

position:499181:1
position: 499181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500178:1
position: 500178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499181-500178:1:exon

LOC116497230
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116497230
product: C-C motif chemokine 4 homolog
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_032200888.1
SIO_010081: LOC116497230
subclass of: SO_0000673
so part of: LOC116497230
location: join(499181..499250,499526..499640,500089..500178)
location: region:499181-500178:1
so has part: feature:499181-499250:1:exon
so has part: feature:499526-499640:1:exon
so has part: feature:500089-500178:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:499181-499250:1:exon

position:499250:1
position: 499250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:499526-499640:1:exon

position:499526:1
position: 499526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499640:1
position: 499640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:500089-500178:1:exon

position:500089:1
position: 500089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116497230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116497230
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: C-C motif chemokine 4 homolog
translation: MKSSTAALAVLVAALCCQVLSSPAAINFSGPCCVKYLSKNFPSGHVTMYLNTSSHCPQPGVIFTTFKGKSFCGNPQDXVGPEYPETAQGPG
SIO_010081: LOC116497230
subclass of: SO_0000673
so part of: LOC116497230
location: join(499181..499250,499526..499640,500089..500178)
location: region:499181-500178:1
so has part: feature:499181-499250:1:exon
so has part: feature:499526-499640:1:exon
so has part: feature:500089-500178:1:exon

XP_032056779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:499181-499250:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:499526-499640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:500089-500178:1:exon

LOC116497229
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116497229
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 500831..506094
location: region:500831-506094:1
so has part: feature:500831-506094:1:exon
subclass of: SO_0000010

116497229
type: Gene
SIO_000068: ncbigene

position:500831:1
position: 500831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506094:1
position: 506094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500831-506094:1:exon

LOC116497229
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116497229
product: E3 ubiquitin-protein ligase TRIM39-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032200887.1
SIO_010081: LOC116497229
subclass of: SO_0000673
so part of: LOC116497229
location: join(500831..501256,501850..501945,503715..503945,504072..504094,504648..504760,505520..506094)
location: region:500831-506094:1
so has part: feature:500831-501256:1:exon
so has part: feature:501850-501945:1:exon
so has part: feature:503715-503945:1:exon
so has part: feature:504072-504094:1:exon
so has part: feature:504648-504760:1:exon
so has part: feature:505520-506094:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:500831-501256:1:exon

position:501256:1
position: 501256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:501850-501945:1:exon

position:501850:1
position: 501850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501945:1
position: 501945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:503715-503945:1:exon

position:503715:1
position: 503715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503945:1
position: 503945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:504072-504094:1:exon

position:504072:1
position: 504072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504094:1
position: 504094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:504648-504760:1:exon

position:504648:1
position: 504648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504760:1
position: 504760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:505520-506094:1:exon

position:505520:1
position: 505520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116497229
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116497229
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like
translation: MALSGALERLQEEAICSICLEYMTEPVSVDCGHNFCHGCITKHCQEKCLWNDAPFSCPQCRAPCRRSSLRPNRQLANIVESIRQLRLGGGVVPGTPLCTQHDERLKLFCEVDEEAICVVCRESQHHRSHAVYPIEEAAQVYKVKLQKVLEHLSKEVEDMKKCESVTKMKIQECKETVKKKRERIVSEFGKLHRLLAAEEKLLLQKLEEEEKQILVMISESMFRLVEQKSLLDELILEIKEKMHLPDEGLLKDMKCILSRCEAVKFQTPKAVSVTLKEDYSIPERCLGMREMLKKFKVDVTLDPETAHPDLILSEDHKSVRRGGRKLLLSFFDNTRRFNSAPVVLGVQLFFSGRHYWEVHVGDKPEWGLGLCKEAASRKGNILFSPNNGYWVLRLQNGSNYEALTCPISHLTLSIRPRCIGIFLDYEAGEISFYNVTDRSHLYTFTDKFSGKLRPLFYLGSFLGGKNAEPLVISWMRDMQGTGCIVL
SIO_010081: LOC116497229
subclass of: SO_0000673
so part of: LOC116497229
location: join(500831..501256,501850..501945,503715..503945,504072..504094,504648..504760,505520..506091)
location: region:500831-506091:1
so has part: feature:500831-501256:1:exon
so has part: feature:501850-501945:1:exon
so has part: feature:503715-503945:1:exon
so has part: feature:504072-504094:1:exon
so has part: feature:504648-504760:1:exon
so has part: feature:505520-506091:1:exon

XP_032056778.1
type: Protein
SIO_000068: ncbiprotein

position:506091:1
position: 506091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500831-501256:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:501850-501945:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:503715-503945:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:504072-504094:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:504648-504760:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:505520-506091:1:exon

LOC116497327
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116497327
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(511722..512802)
location: region:511722-512802:-1
so has part: feature:511722-512802:-1:exon
subclass of: SO_0000010

116497327
type: Gene
SIO_000068: ncbigene

position:511722:-1
position: 511722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512802:-1
position: 512802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511722-512802:-1:exon

LOC116497327
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116497327
product: C-C motif chemokine 4 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032201025.1
SIO_010081: LOC116497327
subclass of: SO_0000673
so part of: LOC116497327
location: complement(join(511722..511903,512239..512353,512684..512802))
location: region:511722-512802:-1
so has part: feature:512684-512802:-1:exon
so has part: feature:512239-512353:-1:exon
so has part: feature:511722-511903:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:512684-512802:-1:exon

position:512684:-1
position: 512684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:512239-512353:-1:exon

position:512239:-1
position: 512239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512353:-1
position: 512353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:511722-511903:-1:exon

position:511903:-1
position: 511903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116497327
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116497327
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-C motif chemokine 4 homolog
translation: MKVSVVALAVLIAAFCYQTSAAPIDSDPPTSCCFTYVQRELPRSFVTDYYETNSLCSQPGVVFITRKGREICANPEHDWVKKYVTELELN
SIO_010081: LOC116497327
subclass of: SO_0000673
so part of: LOC116497327
location: complement(join(511816..511903,512239..512353,512684..512753))
location: region:511816-512753:-1
so has part: feature:512684-512753:-1:exon
so has part: feature:512239-512353:-1:exon
so has part: feature:511816-511903:-1:exon

XP_032056916.1
type: Protein
SIO_000068: ncbiprotein

position:511816:-1
position: 511816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512753:-1
position: 512753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512684-512753:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:512239-512353:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:511816-511903:-1:exon

LOC116497359
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116497359
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 521378..522407
location: region:521378-522407:1
so has part: feature:521378-522407:1:exon
subclass of: SO_0000010

116497359
type: Gene
SIO_000068: ncbigene

position:521378:1
position: 521378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522407:1
position: 522407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521378-522407:1:exon

LOC116497359
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116497359
product: C-C motif chemokine 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 34% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032201063.1
SIO_010081: LOC116497359
subclass of: SO_0000673
so part of: LOC116497359
location: join(521378..521450,521921..522032,522320..522407)
location: region:521378-522407:1
so has part: feature:521378-521450:1:exon
so has part: feature:521921-522032:1:exon
so has part: feature:522320-522407:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:521378-521450:1:exon

position:521450:1
position: 521450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:521921-522032:1:exon

position:521921:1
position: 521921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522032:1
position: 522032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:522320-522407:1:exon

position:522320:1
position: 522320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116497359
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116497359
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-C motif chemokine 4-like
translation: MKVSSVVLALLLIAASCSQMSSAPVGPDHPTCCFSYTSHKLPKKLILHYYVTSTSCSLPALVFITKKGREVCANPSDTWVQRYLQNMKRN
SIO_010081: LOC116497359
subclass of: SO_0000673
so part of: LOC116497359
location: join(521378..521450,521921..522032,522320..522407)
location: region:521378-522407:1
so has part: feature:521378-521450:1:exon
so has part: feature:521921-522032:1:exon
so has part: feature:522320-522407:1:exon

XP_032056954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:521378-521450:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:521921-522032:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:522320-522407:1:exon

LOC116497330
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116497330
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(533944..534929)
location: region:533944-534929:-1
so has part: feature:533944-534929:-1:exon
subclass of: SO_0000010

116497330
type: Gene
SIO_000068: ncbigene

position:533944:-1
position: 533944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534929:-1
position: 534929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533944-534929:-1:exon

LOC116497330
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116497330
product: C-C motif chemokine 4 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032201027.1
SIO_010081: LOC116497330
subclass of: SO_0000673
so part of: LOC116497330
location: complement(join(533944..534031,534367..534481,534811..534929))
location: region:533944-534929:-1
so has part: feature:534811-534929:-1:exon
so has part: feature:534367-534481:-1:exon
so has part: feature:533944-534031:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:534811-534929:-1:exon

position:534811:-1
position: 534811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:534367-534481:-1:exon

position:534367:-1
position: 534367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534481:-1
position: 534481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:533944-534031:-1:exon

position:534031:-1
position: 534031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116497330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116497330
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-C motif chemokine 4 homolog
translation: MKVSVVALAVLIAAFCYQTSAAPIGSDPPTSCCFTYVQRELPRSFVTDYYETNSLCSQPGVVFITRKGREVCANPEHDWVKKYVTELELN
SIO_010081: LOC116497330
subclass of: SO_0000673
so part of: LOC116497330
location: complement(join(533944..534031,534367..534481,534811..534880))
location: region:533944-534880:-1
so has part: feature:534811-534880:-1:exon
so has part: feature:534367-534481:-1:exon
so has part: feature:533944-534031:-1:exon

XP_032056918.1
type: Protein
SIO_000068: ncbiprotein

position:534880:-1
position: 534880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534811-534880:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:534367-534481:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:533944-534031:-1:exon

LOC116497355
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116497355
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 543508..544537
location: region:543508-544537:1
so has part: feature:543508-544537:1:exon
subclass of: SO_0000010

116497355
type: Gene
SIO_000068: ncbigene

position:543508:1
position: 543508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544537:1
position: 544537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543508-544537:1:exon

LOC116497355
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116497355
product: C-C motif chemokine 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 34% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032201059.1
SIO_010081: LOC116497355
subclass of: SO_0000673
so part of: LOC116497355
location: join(543508..543580,544051..544162,544450..544537)
location: region:543508-544537:1
so has part: feature:543508-543580:1:exon
so has part: feature:544051-544162:1:exon
so has part: feature:544450-544537:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:543508-543580:1:exon

position:543580:1
position: 543580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:544051-544162:1:exon

position:544051:1
position: 544051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544162:1
position: 544162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:544450-544537:1:exon

position:544450:1
position: 544450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116497355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116497355
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-C motif chemokine 4-like
translation: MKVSSVVLALLLIAASCSQMSSAPVGPDHPTCCFSYTSHKLPKKLILHYYVTSTSCSLPALVFITKKGREVCANPSDTWVQRYLQNMKRN
SIO_010081: LOC116497355
subclass of: SO_0000673
so part of: LOC116497355
location: join(543508..543580,544051..544162,544450..544537)
location: region:543508-544537:1
so has part: feature:543508-543580:1:exon
so has part: feature:544051-544162:1:exon
so has part: feature:544450-544537:1:exon

XP_032056950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:543508-543580:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:544051-544162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544450-544537:1:exon

LOC116497384
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116497384
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(552687..554055)
location: region:552687-554055:-1
so has part: feature:552687-554055:-1:exon
subclass of: SO_0000010

116497384
type: Gene
SIO_000068: ncbigene

position:552687:-1
position: 552687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554055:-1
position: 554055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552687-554055:-1:exon

LOC116497384
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116497384
product: C-C motif chemokine 5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_032201118.1
SIO_010081: LOC116497384
subclass of: SO_0000673
so part of: LOC116497384
location: complement(join(552687..552774,553417..553528,553983..554055))
location: region:552687-554055:-1
so has part: feature:553983-554055:-1:exon
so has part: feature:553417-553528:-1:exon
so has part: feature:552687-552774:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:553983-554055:-1:exon

position:553983:-1
position: 553983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:553417-553528:-1:exon

position:553417:-1
position: 553417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553528:-1
position: 553528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:552687-552774:-1:exon

position:552774:-1
position: 552774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116497384
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116497384
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-C motif chemokine 5-like
translation: MNIFSAALSILLVAGLFSQAFSGPIGADTTICCFSYTSQKLPQSHVKDYFYTSSKCPQPAVVFITRRTRQVCAKPDARWVKEYVNFLELH
SIO_010081: LOC116497384
subclass of: SO_0000673
so part of: LOC116497384
location: complement(join(552687..552774,553417..553528,553983..554055))
location: region:552687-554055:-1
so has part: feature:553983-554055:-1:exon
so has part: feature:553417-553528:-1:exon
so has part: feature:552687-552774:-1:exon

XP_032057009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:553983-554055:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:553417-553528:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:552687-552774:-1:exon

TRNAE-CUC
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAE-CUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 558683..558754
location: region:558683-558754:1
so has part: feature:558683-558754:1:exon
subclass of: SO_0000663

116497484
type: Gene
SIO_000068: ncbigene

position:558683:1
position: 558683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558754:1
position: 558754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558683-558754:1:exon

TRNAE-CUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAE-CUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:558716..558718,aa:Glu,seq:ctc)
SIO_010081: TRNAE-CUC
subclass of: SO_0000673
so part of: TRNAE-CUC
location: 558683..558754
location: region:558683-558754:1
so has part: feature:558683-558754:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:558683-558754:1:exon

TRNAS-UGA
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TRNAS-UGA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(559240..559321)
location: region:559240-559321:-1
so has part: feature:559240-559321:-1:exon
subclass of: SO_0000663

116497486
type: Gene
SIO_000068: ncbigene

position:559240:-1
position: 559240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559321:-1
position: 559321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559240-559321:-1:exon

TRNAS-UGA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 219594
gene: TRNAS-UGA
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA serine (anticodon UGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(559286..559288),aa:Ser,seq:tga)
SIO_010081: TRNAS-UGA
subclass of: SO_0000673
so part of: TRNAS-UGA
location: complement(559240..559321)
location: region:559240-559321:-1
so has part: feature:559240-559321:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:559240-559321:-1:exon

LOC116497396
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116497396
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 568705..583264
location: region:568705-583264:1
so has part: feature:568705-583264:1:exon
subclass of: SO_0000010

116497396
type: Gene
SIO_000068: ncbigene

position:568705:1
position: 568705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583264:1
position: 583264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568705-583264:1:exon

LOC116497396
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116497396
product: eosinophil peroxidase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins
transcript id: XM_032201131.1
SIO_010081: LOC116497396
subclass of: SO_0000673
so part of: LOC116497396
location: join(568705..568711,569640..569717,570325..570418,571052..571227,572987..573104,575869..575998,576641..576841,576935..577250,578445..578605,579160..579412,580739..580909,581746..581983,582474..582691,583245..583264)
location: region:568705-583264:1
so has part: feature:568705-568711:1:exon
so has part: feature:569640-569717:1:exon
so has part: feature:570325-570418:1:exon
so has part: feature:571052-571227:1:exon
so has part: feature:572987-573104:1:exon
so has part: feature:575869-575998:1:exon
so has part: feature:576641-576841:1:exon
so has part: feature:576935-577250:1:exon
so has part: feature:578445-578605:1:exon
so has part: feature:579160-579412:1:exon
so has part: feature:580739-580909:1:exon
so has part: feature:581746-581983:1:exon
so has part: feature:582474-582691:1:exon
so has part: feature:583245-583264:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:568705-568711:1:exon

position:568711:1
position: 568711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:569640-569717:1:exon

position:569640:1
position: 569640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569717:1
position: 569717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:570325-570418:1:exon

position:570325:1
position: 570325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570418:1
position: 570418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:571052-571227:1:exon

position:571052:1
position: 571052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571227:1
position: 571227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:572987-573104:1:exon

position:572987:1
position: 572987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573104:1
position: 573104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:575869-575998:1:exon

position:575869:1
position: 575869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575998:1
position: 575998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:576641-576841:1:exon

position:576641:1
position: 576641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576841:1
position: 576841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:576935-577250:1:exon

position:576935:1
position: 576935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577250:1
position: 577250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:578445-578605:1:exon

position:578445:1
position: 578445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578605:1
position: 578605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:579160-579412:1:exon

position:579160:1
position: 579160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579412:1
position: 579412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:580739-580909:1:exon

position:580739:1
position: 580739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580909:1
position: 580909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:581746-581983:1:exon

position:581746:1
position: 581746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:581983:1
position: 581983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:582474-582691:1:exon

position:582474:1
position: 582474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:582691:1
position: 582691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:583245-583264:1:exon

position:583245:1
position: 583245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116497396
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116497396
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eosinophil peroxidase-like
translation: MEGIKLIVTLQGVIITFCLVGPLDSSLNQHLEVLSDSSLLSTINEARQLVDSAYLRARKSLKQKLEEKVASSMDFLKHLKEPVGRTRCAVRAADYLETTLKLLKGKLQLLGKGRFNVTDLLDRKQKEMISRETGCDYHSIKCPEDDIYRTITGECNNRKHSHFGASNHAFVRWLPAAYEDGVSVPRGVSEGKLYNGFPLPLVRRVSNELARTGNENVTQDQELSLFFMHWGQWVSHDIDLAPSSGAGANPDLHCETDCTFKSPCFPIKFPPDDPRVLRSNSCMPFIQSASVCNSRTFTREQINAVSSFIDASMVYGSEDSVAKSLRNQTSWMGLLAVNQNFTDAGLELLPFENKTKSICVLTNKSMNIPCFKAGDKRVTENLGLSALHTVFLREHNRLVTKLGKLNPHWDGEKLYQESRKIVVAMTQKITYRDYLPLVLGEETNRWIPSYSGYNETMNPTVSNVFSLAFRFGHTSVQPFVSRLDDSFQPMGQFSHVPLHLTFCASWRIITEGGIDPLIRGMVVDHAKLMKQNQLLVEELQNHLFEQTAVMGLDLAALNLQRGRDHGLPGYNAWRRFCGLSQPQSVEELSEVLGNSKLAKKFMDLYGTPDNIDLWIGAIAEPFIPQGRVGPLLACIIGTQFRNLRDGDRFWWEKPGVFTLQQLHALKKVSLSKVICDNTHIKKLPRDMFQASTYPENFVDCHEIDMLNLSAWKDEPESGRKGTGNFF
SIO_010081: LOC116497396
subclass of: SO_0000673
so part of: LOC116497396
location: join(568705..568711,569640..569717,570325..570418,571052..571227,572987..573104,575869..575998,576641..576841,576935..577250,578445..578605,579160..579412,580739..580909,581746..581983,582474..582691,583245..583264)
location: region:568705-583264:1
so has part: feature:568705-568711:1:exon
so has part: feature:569640-569717:1:exon
so has part: feature:570325-570418:1:exon
so has part: feature:571052-571227:1:exon
so has part: feature:572987-573104:1:exon
so has part: feature:575869-575998:1:exon
so has part: feature:576641-576841:1:exon
so has part: feature:576935-577250:1:exon
so has part: feature:578445-578605:1:exon
so has part: feature:579160-579412:1:exon
so has part: feature:580739-580909:1:exon
so has part: feature:581746-581983:1:exon
so has part: feature:582474-582691:1:exon
so has part: feature:583245-583264:1:exon

XP_032057022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:568705-568711:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:569640-569717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570325-570418:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:571052-571227:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:572987-573104:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:575869-575998:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:576641-576841:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:576935-577250:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:578445-578605:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:579160-579412:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:580739-580909:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:581746-581983:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:582474-582691:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:583245-583264:1:exon

LOC116497457
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116497457
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(585986..593522)
location: region:585986-593522:-1
so has part: feature:585986-593522:-1:exon
subclass of: SO_0000010

116497457
type: Gene
SIO_000068: ncbigene

position:585986:-1
position: 585986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593522:-1
position: 593522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585986-593522:-1:exon

LOC116497457
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116497457
product: 1-acyl-sn-glycerol-3-phosphate acyltransferase alpha-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_032201203.1
SIO_010081: LOC116497457
subclass of: SO_0000673
so part of: LOC116497457
location: complement(join(585986..586131,588592..588664,589165..589260,589547..589722,590159..590292,593338..593522))
location: region:585986-593522:-1
so has part: feature:593338-593522:-1:exon
so has part: feature:590159-590292:-1:exon
so has part: feature:589547-589722:-1:exon
so has part: feature:589165-589260:-1:exon
so has part: feature:588592-588664:-1:exon
so has part: feature:585986-586131:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:593338-593522:-1:exon

position:593338:-1
position: 593338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:590159-590292:-1:exon

position:590159:-1
position: 590159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590292:-1
position: 590292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:589547-589722:-1:exon

position:589547:-1
position: 589547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589722:-1
position: 589722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:589165-589260:-1:exon

position:589165:-1
position: 589165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589260:-1
position: 589260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:588592-588664:-1:exon

position:588592:-1
position: 588592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588664:-1
position: 588664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:585986-586131:-1:exon

position:586131:-1
position: 586131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116497457
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116497457
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-acyl-sn-glycerol-3-phosphate acyltransferase alpha-like
translation: MELLLLRYPFTFLLIAFLILYQMYPAFRFFCKMCFYKLWVFAISLLVITASIPRGRNCENMKFFSMSFLPLKYIFGIKIVVKGKENLRTKKPFVLVLNHQTSLDIMVMMEILPSRCVAIAKKEILYMGTFGLACWLAGLIFIDRKKREESIATLTEVAHSMHKDNFRVLIFPEGTRNHSGSMLPFKRGAFQLAVKAQVPIIPVVISSYSDFYSQKEKRFTPGKITIQILPEVKTLGLGPEDVPKLTEQVRDSMITTYQGISGMTNGASH
SIO_010081: LOC116497457
subclass of: SO_0000673
so part of: LOC116497457
location: complement(join(585986..586131,588592..588664,589165..589260,589547..589722,590159..590292,593338..593522))
location: region:585986-593522:-1
so has part: feature:593338-593522:-1:exon
so has part: feature:590159-590292:-1:exon
so has part: feature:589547-589722:-1:exon
so has part: feature:589165-589260:-1:exon
so has part: feature:588592-588664:-1:exon
so has part: feature:585986-586131:-1:exon

XP_032057094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:593338-593522:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:590159-590292:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:589547-589722:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:589165-589260:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:588592-588664:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:585986-586131:-1:exon

LOC116497447
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116497447
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(604053..624139)
location: region:604053-624139:-1
so has part: feature:604053-624139:-1:exon
subclass of: SO_0000010

116497447
type: Gene
SIO_000068: ncbigene

position:604053:-1
position: 604053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624139:-1
position: 624139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604053-624139:-1:exon

LOC116497447
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116497447
product: myeloperoxidase-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032201190.1
SIO_010081: LOC116497447
subclass of: SO_0000673
so part of: LOC116497447
location: complement(join(604053..604947,606196..606414,608106..608343,610562..610732,611098..611344,613140..613300,615656..615971,616987..617193,618328..618457,619335..619458,620642..620817,621784..621877,623302..623379,624111..624139))
location: region:604053-624139:-1
so has part: feature:624111-624139:-1:exon
so has part: feature:623302-623379:-1:exon
so has part: feature:621784-621877:-1:exon
so has part: feature:620642-620817:-1:exon
so has part: feature:619335-619458:-1:exon
so has part: feature:618328-618457:-1:exon
so has part: feature:616987-617193:-1:exon
so has part: feature:615656-615971:-1:exon
so has part: feature:613140-613300:-1:exon
so has part: feature:611098-611344:-1:exon
so has part: feature:610562-610732:-1:exon
so has part: feature:608106-608343:-1:exon
so has part: feature:606196-606414:-1:exon
so has part: feature:604053-604947:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:624111-624139:-1:exon

position:624111:-1
position: 624111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:623302-623379:-1:exon

position:623302:-1
position: 623302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623379:-1
position: 623379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:621784-621877:-1:exon

position:621784:-1
position: 621784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621877:-1
position: 621877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:620642-620817:-1:exon

position:620642:-1
position: 620642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620817:-1
position: 620817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:619335-619458:-1:exon

position:619335:-1
position: 619335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619458:-1
position: 619458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:618328-618457:-1:exon

position:618328:-1
position: 618328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618457:-1
position: 618457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:616987-617193:-1:exon

position:616987:-1
position: 616987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617193:-1
position: 617193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:615656-615971:-1:exon

position:615656:-1
position: 615656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615971:-1
position: 615971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:613140-613300:-1:exon

position:613140:-1
position: 613140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613300:-1
position: 613300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:611098-611344:-1:exon

position:611098:-1
position: 611098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611344:-1
position: 611344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:610562-610732:-1:exon

position:610562:-1
position: 610562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610732:-1
position: 610732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:608106-608343:-1:exon

position:608106:-1
position: 608106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608343:-1
position: 608343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:606196-606414:-1:exon

position:606196:-1
position: 606196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606414:-1
position: 606414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:604053-604947:-1:exon

position:604947:-1
position: 604947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116497447
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116497447
product: myeloperoxidase-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032201191.1
SIO_010081: LOC116497447
subclass of: SO_0000673
so part of: LOC116497447
location: complement(join(604053..604947,606191..606414,608106..608343,610562..610732,611098..611344,613140..613300,615656..615971,616987..617193,618328..618457,619335..619458,620642..620817,621784..621877,623302..623379,624111..624139))
location: region:604053-624139:-1
so has part: feature:624111-624139:-1:exon
so has part: feature:623302-623379:-1:exon
so has part: feature:621784-621877:-1:exon
so has part: feature:620642-620817:-1:exon
so has part: feature:619335-619458:-1:exon
so has part: feature:618328-618457:-1:exon
so has part: feature:616987-617193:-1:exon
so has part: feature:615656-615971:-1:exon
so has part: feature:613140-613300:-1:exon
so has part: feature:611098-611344:-1:exon
so has part: feature:610562-610732:-1:exon
so has part: feature:608106-608343:-1:exon
so has part: feature:606191-606414:-1:exon
so has part: feature:604053-604947:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:624111-624139:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623302-623379:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:621784-621877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:620642-620817:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:619335-619458:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:618328-618457:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:616987-617193:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:615656-615971:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:613140-613300:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:611098-611344:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:610562-610732:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:608106-608343:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:606191-606414:-1:exon

position:606191:-1
position: 606191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:604053-604947:-1:exon

LOC116497447
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116497447
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myeloperoxidase-like isoform X1
translation: MKAEILFPGLLVVLILFQAHVSSSYDLSKELSDASLLSSVFEAKQIVDSAYKNTRDRIKKNLENDVLTPVELLRYFKQPVAGTRAAVRAADYMETTLTLLKEKLRWAVKGDFNVTDMLTPAQLGMIFKASGCDQQNEEINCESSDRYRTITGKCNNRKNPLLGASNRALARWLPADYEDGVSIPHGWTEKKRFFGFPFPLVRKVSNEIVRFPPAQLKLDQQRSLMFMQWGQFIDHDLDFSPETPARVTFSGKVDCHTSCAKQPPCFPIKIPPNDPRVKNTRDCLPFIRSAPACDSGKAIREQINALTSFLDGSVVYGSEVPLANKLRDQTNQLGLLAVNRNFTDRGMAYMPFDYMSKNPCLMVSKGAKIPCFLAGDSRANEMLELACMHTLFVREHNRLARGLKRLNPHWNGEKLYQEARKIVGAMIQIITYRDYLPLLLGESLQKWIPCYRGYNEAVDPRISNVFTLAFRFAHASIPPFVGRLNENYKPINPKLQLSKTFFGVWRIVKEGGIDPFLRNLMASKAKLMTQKQMVVDELRDRMFEQVERIGFDLAALNMQRGRDHGLPGYISWRQFCRLSKPRGLKSLAQVLKNHSLAKKFMQLYGTPKNIDIWIGALAEPFVKGGRVGPLMACLIGTQFRKIRDGDRFWWENKGVFTPQQRSSLAKISLSRIICDNTHISKVSRNIFQANSYPHSFVSCNQIPKLDLRAWKSKKMEESTERTT
SIO_010081: LOC116497447
subclass of: SO_0000673
so part of: LOC116497447
location: complement(join(604935..604947,606196..606414,608106..608343,610562..610732,611098..611344,613140..613300,615656..615971,616987..617193,618328..618457,619335..619458,620642..620817,621784..621877,623302..623377))
location: region:604935-623377:-1
so has part: feature:623302-623377:-1:exon
so has part: feature:621784-621877:-1:exon
so has part: feature:620642-620817:-1:exon
so has part: feature:619335-619458:-1:exon
so has part: feature:618328-618457:-1:exon
so has part: feature:616987-617193:-1:exon
so has part: feature:615656-615971:-1:exon
so has part: feature:613140-613300:-1:exon
so has part: feature:611098-611344:-1:exon
so has part: feature:610562-610732:-1:exon
so has part: feature:608106-608343:-1:exon
so has part: feature:606196-606414:-1:exon
so has part: feature:604935-604947:-1:exon

XP_032057081.1
type: Protein
SIO_000068: ncbiprotein

position:604935:-1
position: 604935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623377:-1
position: 623377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623302-623377:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:621784-621877:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:620642-620817:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:619335-619458:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:618328-618457:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:616987-617193:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:615656-615971:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:613140-613300:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:611098-611344:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:610562-610732:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:608106-608343:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:606196-606414:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:604935-604947:-1:exon

LOC116497447
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116497447
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myeloperoxidase-like isoform X2
translation: MKAEILFPGLLVVLILFQAHVSSSYDLSKELSDASLLSSVFEAKQIVDSAYKNTRDRIKKNLENDVLTPVELLRYFKQPVAGTRAAVRAADYMETTLTLLKEKLRWAVKGDFNVTDMLTPAQLGMIFKASGCDQQNEEINCESSDRYRTITGKCNNRKNPLLGASNRALARWLPADYEDGVSIPHGWTEKKRFFGFPFPLVRKVSNEIVRFPPAQLKLDQQRSLMFMQWGQFIDHDLDFSPETPARVTFSGKVDCHTSCAKQPPCFPIKIPPNDPRVKNTRDCLPFIRSAPACDSGKAIREQINALTSFLDGSVVYGSEVPLANKLRDQTNQLGLLAVNRNFTDRGMAYMPFDYMSKNPCLMVSKGAKIPCFLAGDSRANEMLELACMHTLFVREHNRLARGLKRLNPHWNGEKLYQEARKIVGAMIQIITYRDYLPLLLGESLQKWIPCYRGYNEAVDPRISNVFTLAFRFAHASIPPFVGRLNENYKPINPKLQLSKTFFGVWRIVKEGGIDPFLRNLMASKAKLMTQKQMVVDELRDRMFEQVERIGFDLAALNMQRGRDHGLPGYISWRQFCRLSKPRGLKSLAQVLKNHSLAKKFMQLYGTPKNIDIWIGALAEPFVKGGRVGPLMACLIGTQFRKIRDGDRFWWENKGVFTPQQRSSLAKISLSRIICDNTHISKVSRNIFQANSYPHSFVSCNQIPKLDLRAWKSKKMEESTE
SIO_010081: LOC116497447
subclass of: SO_0000673
so part of: LOC116497447
location: complement(join(606192..606414,608106..608343,610562..610732,611098..611344,613140..613300,615656..615971,616987..617193,618328..618457,619335..619458,620642..620817,621784..621877,623302..623377))
location: region:606192-623377:-1
so has part: feature:623302-623377:-1:exon
so has part: feature:621784-621877:-1:exon
so has part: feature:620642-620817:-1:exon
so has part: feature:619335-619458:-1:exon
so has part: feature:618328-618457:-1:exon
so has part: feature:616987-617193:-1:exon
so has part: feature:615656-615971:-1:exon
so has part: feature:613140-613300:-1:exon
so has part: feature:611098-611344:-1:exon
so has part: feature:610562-610732:-1:exon
so has part: feature:608106-608343:-1:exon
so has part: feature:606192-606414:-1:exon

XP_032057082.1
type: Protein
SIO_000068: ncbiprotein

position:606192:-1
position: 606192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623302-623377:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:621784-621877:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:620642-620817:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:619335-619458:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:618328-618457:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:616987-617193:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:615656-615971:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:613140-613300:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:611098-611344:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:610562-610732:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:608106-608343:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:606192-606414:-1:exon

TSPOAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TSPOAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(629289..699046)
location: region:629289-699046:-1
so has part: feature:629289-699046:-1:exon
subclass of: SO_0000010

116497397
type: Gene
SIO_000068: ncbigene

position:629289:-1
position: 629289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:699046:-1
position: 699046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:629289-699046:-1:exon

TSPOAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: TSPOAP1
product: TSPO associated protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032201132.1
SIO_010081: TSPOAP1
subclass of: SO_0000673
so part of: TSPOAP1
location: complement(join(629289..630622,637318..637446,638674..638745,640545..640648,641901..641936,642309..642380,644869..645037,645221..645372,645525..645651,646243..647367,650767..650946,651263..651565,654108..654698,655497..655648,656173..656988,658380..658489,660024..660133,662584..662804,663171..663354,666526..666546,669153..669203,669547..669651,670056..670178,670800..670889,672131..672214,673125..673232,678356..678616,681835..682011,684234..684362,686622..686729,698744..699046))
location: region:629289-699046:-1
so has part: feature:698744-699046:-1:exon
so has part: feature:686622-686729:-1:exon
so has part: feature:684234-684362:-1:exon
so has part: feature:681835-682011:-1:exon
so has part: feature:678356-678616:-1:exon
so has part: feature:673125-673232:-1:exon
so has part: feature:672131-672214:-1:exon
so has part: feature:670800-670889:-1:exon
so has part: feature:670056-670178:-1:exon
so has part: feature:669547-669651:-1:exon
so has part: feature:669153-669203:-1:exon
so has part: feature:666526-666546:-1:exon
so has part: feature:663171-663354:-1:exon
so has part: feature:662584-662804:-1:exon
so has part: feature:660024-660133:-1:exon
so has part: feature:658380-658489:-1:exon
so has part: feature:656173-656988:-1:exon
so has part: feature:655497-655648:-1:exon
so has part: feature:654108-654698:-1:exon
so has part: feature:651263-651565:-1:exon
so has part: feature:650767-650946:-1:exon
so has part: feature:646243-647367:-1:exon
so has part: feature:645525-645651:-1:exon
so has part: feature:645221-645372:-1:exon
so has part: feature:644869-645037:-1:exon
so has part: feature:642309-642380:-1:exon
so has part: feature:641901-641936:-1:exon
so has part: feature:640545-640648:-1:exon
so has part: feature:638674-638745:-1:exon
so has part: feature:637318-637446:-1:exon
so has part: feature:629289-630622:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:698744-699046:-1:exon

position:698744:-1
position: 698744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:686622-686729:-1:exon

position:686622:-1
position: 686622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686729:-1
position: 686729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:684234-684362:-1:exon

position:684234:-1
position: 684234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684362:-1
position: 684362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:681835-682011:-1:exon

position:681835:-1
position: 681835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682011:-1
position: 682011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:678356-678616:-1:exon

position:678356:-1
position: 678356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678616:-1
position: 678616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:673125-673232:-1:exon

position:673125:-1
position: 673125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673232:-1
position: 673232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:672131-672214:-1:exon

position:672131:-1
position: 672131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672214:-1
position: 672214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:670800-670889:-1:exon

position:670800:-1
position: 670800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670889:-1
position: 670889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:670056-670178:-1:exon

position:670056:-1
position: 670056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670178:-1
position: 670178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:669547-669651:-1:exon

position:669547:-1
position: 669547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669651:-1
position: 669651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:669153-669203:-1:exon

position:669153:-1
position: 669153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669203:-1
position: 669203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:666526-666546:-1:exon

position:666526:-1
position: 666526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666546:-1
position: 666546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:663171-663354:-1:exon

position:663171:-1
position: 663171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663354:-1
position: 663354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:662584-662804:-1:exon

position:662584:-1
position: 662584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662804:-1
position: 662804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:660024-660133:-1:exon

position:660024:-1
position: 660024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660133:-1
position: 660133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:658380-658489:-1:exon

position:658380:-1
position: 658380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658489:-1
position: 658489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:656173-656988:-1:exon

position:656173:-1
position: 656173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656988:-1
position: 656988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:655497-655648:-1:exon

position:655497:-1
position: 655497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:655648:-1
position: 655648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:654108-654698:-1:exon

position:654108:-1
position: 654108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654698:-1
position: 654698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:651263-651565:-1:exon

position:651263:-1
position: 651263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651565:-1
position: 651565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:650767-650946:-1:exon

position:650767:-1
position: 650767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:650946:-1
position: 650946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:646243-647367:-1:exon

position:646243:-1
position: 646243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:647367:-1
position: 647367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:645525-645651:-1:exon

position:645525:-1
position: 645525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645651:-1
position: 645651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:645221-645372:-1:exon

position:645221:-1
position: 645221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645372:-1
position: 645372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:644869-645037:-1:exon

position:644869:-1
position: 644869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645037:-1
position: 645037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:642309-642380:-1:exon

position:642309:-1
position: 642309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642380:-1
position: 642380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:641901-641936:-1:exon

position:641901:-1
position: 641901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641936:-1
position: 641936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:640545-640648:-1:exon

position:640545:-1
position: 640545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:640648:-1
position: 640648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:638674-638745:-1:exon

position:638674:-1
position: 638674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638745:-1
position: 638745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:637318-637446:-1:exon

position:637318:-1
position: 637318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637446:-1
position: 637446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:629289-630622:-1:exon

position:630622:-1
position: 630622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TSPOAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: TSPOAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peripheral-type benzodiazepine receptor-associated protein 1
translation: MEEPDPPHTGDAVPAASASACPDVSLAPATREGAGGAAGRASRPPSPGPEGAGAAQPQEGARSSLLAPPADPQRGRPAPELVRPRQAMDGLGRERTDGLAQSGADYSFLVSQNTKLLSALEDLQHRYSSLAEENSLLRRSCFPETEEKVKHLKRKNAELAVIAKRLEERARKLQEANLKVVTAPVPLKGSSLELCKKAFACQRAKDLTEQASALLAKDKQIEALQQECRELQAKLIAGKDDPCCLNVVEFDRLLRESQKEVLRLQRQIALKNFKECLRSSKTSSGSSLPSATTCLGATLNTCIKDSPLPKEARSGDPVLRVEAHRKVEPGVLPLGIASEGHENFPPRNAITDPESSQQIQQLEFELKKKRKKCENLEHEVRKKHKRCKELEIQLQEIQSENARLAEENLQLNEKAGWAGQVESENADLKLQVVLVTKERDSVIQTNQGLQTKLENLEQVLKHMRDVAERRQQLEAEHKEALLVLQEKQEEVRRLQQAQAEAKREHEGAVQLLESTLDCMQARVKDLEDQCRNQTEQFSLLSQELKQFRLQTGKIDLLTSTLVTSELPLALCSSSPQLHWEKDSTGPALLTHQSTKKVHNEGTDELESSQRVPDAAVGSPVSATGSQKQAKKVESQSSSSKSESMQNSPKSCPTPEVDTASEMEELDVDSISLMPETGSQGPAKLQVFLARYSYNPFDGPNENPEAELPLTAGEYIYIYGDMDEDGFFEGELMDGRRGLVPSNFVERISDDDLMTFLPSELNDLTHSSYQEKSFVSASTSSGDKSDFSIEESSISPLVSRAEGDQEEAVSHTAVPYPRKLTLIKQLARSIVVGWEPPLLPTGCPDIQSYNIYVDEELRQNVKSGFQTKTVIEKLDLKTKAYRVSVQSVTEQGSSDKLRCTFFVGQDICLAPTMLKVRSVTATSAEVTWLPCNSNYNHAVYLNGEECDITKPGVYWYAFRNLQPSTQYVAKLEARPLKTPWEEVPEGQEQNSAVIHFTTPLAGTPDAPLDVQVEAGPSPGILVISWLPVTIDAEGSSNGVRVTGYAVYADGQKAIEVTSPTAGSILVDLSQLQMFQVCREVSVRTMSLYGESVDSVPAQISSVLLRTSRHSSNSDSAVSTTFTSRLPCRDPRGSLSARSPPMHQTVALLLQQVSTDISDAKLTDLSSSHDGSARSLPEKASSPLHLYSPSTSLVHTIDTFPEGSGDAQDKKCLTVPPQQAGSTVFPGEGTEPGSSKEAELKSSDKRTEVKMEQSVTKAPELETPSNSSLKIHMETCCTCSVEEPLKSSSTERERETKEKHLSPEPVPAPGQADRTEGTSRDATTGGSSCQEFLRLSPGKEVMKEMSRVKREQEEKLSEIGRRQLTLFAEHNRSSDLSDILEEEEEDELSSEALEEKKWDSREPFYRENGEKMDLCDTDSDEEILEKILELPLQKNHSKKLFSIPEVTEDEDEDEDEKGVMEEKANVQDSLEMPTYHAGRTEKPLSIQEPFLKADGSDSSPDLSAETPWDECTVKESRGDADHESPGFEPLGWSQKRANWNRGYQENDPKPGTGAIPTQSKKGNNYQEKIWSRPEMGRKRQNDLSEHCSHLLGNCSQMGSGLYRAPSLREELNIVSSAGGKEGFDVYNRARQGTSRRNHKKAVVSGFGERALAAALCSSPRSLEIDVEYDTEDDQDSTCASPPESRLWPERSQSCAGDWSDCSSQSEVVHMDGRRDLTRLEMLEERDMEWAGYPNHHLQFFCQEKEALRCESSSEEQGWDLDCKSPVWRRRLEHPWKGIRSTSLHKRASGNKDPRGQELSGSAAWQAPSRRGNRSVRRSQMQKPLLSSPGPPRSAASATAVKDDGIRIFVALFDYDPVSMSPNPDAAEEELPFKEGQILKVCGDKDADGFYRGECAGREGYIPCNMVSEIQVENNEIKRQLLKQGFLPADTPMESIGNGTFSPPPRRQTVPPPKPRRSKKELDKQEKYKSQTGQKHQDFEAELLTPRSMMAVFDYNPKESSPN…
SIO_010081: TSPOAP1
subclass of: SO_0000673
so part of: TSPOAP1
location: complement(join(630407..630622,637318..637446,638674..638745,640545..640648,641901..641936,642309..642380,644869..645037,645221..645372,645525..645651,646243..647367,650767..650946,651263..651565,654108..654698,655497..655648,656173..656988,658380..658489,660024..660133,662584..662804,663171..663354,666526..666546,669153..669203,669547..669651,670056..670178,670800..670889,672131..672214,673125..673232,678356..678616,681835..682011,684234..684362,686622..686729,698744..699046))
location: region:630407-699046:-1
so has part: feature:698744-699046:-1:exon
so has part: feature:686622-686729:-1:exon
so has part: feature:684234-684362:-1:exon
so has part: feature:681835-682011:-1:exon
so has part: feature:678356-678616:-1:exon
so has part: feature:673125-673232:-1:exon
so has part: feature:672131-672214:-1:exon
so has part: feature:670800-670889:-1:exon
so has part: feature:670056-670178:-1:exon
so has part: feature:669547-669651:-1:exon
so has part: feature:669153-669203:-1:exon
so has part: feature:666526-666546:-1:exon
so has part: feature:663171-663354:-1:exon
so has part: feature:662584-662804:-1:exon
so has part: feature:660024-660133:-1:exon
so has part: feature:658380-658489:-1:exon
so has part: feature:656173-656988:-1:exon
so has part: feature:655497-655648:-1:exon
so has part: feature:654108-654698:-1:exon
so has part: feature:651263-651565:-1:exon
so has part: feature:650767-650946:-1:exon
so has part: feature:646243-647367:-1:exon
so has part: feature:645525-645651:-1:exon
so has part: feature:645221-645372:-1:exon
so has part: feature:644869-645037:-1:exon
so has part: feature:642309-642380:-1:exon
so has part: feature:641901-641936:-1:exon
so has part: feature:640545-640648:-1:exon
so has part: feature:638674-638745:-1:exon
so has part: feature:637318-637446:-1:exon
so has part: feature:630407-630622:-1:exon

XP_032057023.1
type: Protein
SIO_000068: ncbiprotein

position:630407:-1
position: 630407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:698744-699046:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:686622-686729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:684234-684362:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:681835-682011:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:678356-678616:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:673125-673232:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:672131-672214:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:670800-670889:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:670056-670178:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:669547-669651:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:669153-669203:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:666526-666546:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:663171-663354:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:662584-662804:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:660024-660133:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:658380-658489:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:656173-656988:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:655497-655648:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:654108-654698:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:651263-651565:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:650767-650946:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:646243-647367:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:645525-645651:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:645221-645372:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:644869-645037:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:642309-642380:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:641901-641936:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:640545-640648:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:638674-638745:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:637318-637446:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:630407-630622:-1:exon

SUPT4H1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: SUPT4H1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(715577..718382)
location: region:715577-718382:-1
so has part: feature:715577-718382:-1:exon
subclass of: SO_0000010

116497204
type: Gene
SIO_000068: ncbigene

position:715577:-1
position: 715577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718382:-1
position: 718382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:715577-718382:-1:exon

SUPT4H1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SUPT4H1
product: SPT4 homolog, DSIF elongation factor subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032200838.1
SIO_010081: SUPT4H1
subclass of: SO_0000673
so part of: SUPT4H1
location: complement(join(715577..715999,717488..717541,717752..717807,717898..718004,718301..718382))
location: region:715577-718382:-1
so has part: feature:718301-718382:-1:exon
so has part: feature:717898-718004:-1:exon
so has part: feature:717752-717807:-1:exon
so has part: feature:717488-717541:-1:exon
so has part: feature:715577-715999:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:718301-718382:-1:exon

position:718301:-1
position: 718301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:717898-718004:-1:exon

position:717898:-1
position: 717898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718004:-1
position: 718004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:717752-717807:-1:exon

position:717752:-1
position: 717752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717807:-1
position: 717807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:717488-717541:-1:exon

position:717488:-1
position: 717488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717541:-1
position: 717541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:715577-715999:-1:exon

position:715999:-1
position: 715999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SUPT4H1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SUPT4H1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation factor SPT4
translation: MALETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMMSPEDSWVSKWQRISNFKPGVYAVSVTGRLPQGIVRELKSRGVAYKSRDTAIKT
SIO_010081: SUPT4H1
subclass of: SO_0000673
so part of: SUPT4H1
location: complement(join(715932..715999,717488..717541,717752..717807,717898..718004,718301..718369))
location: region:715932-718369:-1
so has part: feature:718301-718369:-1:exon
so has part: feature:717898-718004:-1:exon
so has part: feature:717752-717807:-1:exon
so has part: feature:717488-717541:-1:exon
so has part: feature:715932-715999:-1:exon

XP_032056729.1
type: Protein
SIO_000068: ncbiprotein

position:715932:-1
position: 715932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718369:-1
position: 718369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:718301-718369:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:717898-718004:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:717752-717807:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:717488-717541:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:715932-715999:-1:exon

RNF43
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: RNF43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(721945..783686)
location: region:721945-783686:-1
so has part: feature:721945-783686:-1:exon
subclass of: SO_0000010

116497343
type: Gene
SIO_000068: ncbigene

position:721945:-1
position: 721945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783686:-1
position: 783686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:721945-783686:-1:exon

RNF43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: RNF43
product: ring finger protein 43
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032201046.1
SIO_010081: RNF43
subclass of: SO_0000673
so part of: RNF43
location: complement(join(721945..722091,729948..731477,731867..731969,732510..732665,733270..733371,733880..734011,735325..735399,739715..739837,783450..783686))
location: region:721945-783686:-1
so has part: feature:783450-783686:-1:exon
so has part: feature:739715-739837:-1:exon
so has part: feature:735325-735399:-1:exon
so has part: feature:733880-734011:-1:exon
so has part: feature:733270-733371:-1:exon
so has part: feature:732510-732665:-1:exon
so has part: feature:731867-731969:-1:exon
so has part: feature:729948-731477:-1:exon
so has part: feature:721945-722091:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:783450-783686:-1:exon

position:783450:-1
position: 783450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:739715-739837:-1:exon

position:739715:-1
position: 739715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739837:-1
position: 739837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:735325-735399:-1:exon

position:735325:-1
position: 735325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:735399:-1
position: 735399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:733880-734011:-1:exon

position:733880:-1
position: 733880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:734011:-1
position: 734011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:733270-733371:-1:exon

position:733270:-1
position: 733270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:733371:-1
position: 733371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:732510-732665:-1:exon

position:732510:-1
position: 732510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732665:-1
position: 732665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:731867-731969:-1:exon

position:731867:-1
position: 731867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731969:-1
position: 731969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:729948-731477:-1:exon

position:729948:-1
position: 729948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731477:-1
position: 731477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:721945-722091:-1:exon

position:722091:-1
position: 722091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNF43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: RNF43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF43
translation: MSGGPQLQLAVLWPWLLMATLQVGLGHTGLALAAAVESERSAAQKAIIRVIPLKVEPIILEGEFANVAEVTPAEGKLLQSHPLSLCNTSEDEHTESGFITIVKLEQPDRDPNPCLSLANKAKLAGERGARAILFDITDDESAADQLRKPRGLSQPVVLIRGHDAELLMGVVNKNREAHVKIEVKEPPAWPDYDVWILLTVVSTVVVIILIFVVRTKCQLNRTQDSLQQQTMQAIGQLATRNYQARCRQASRWDSASSCSSAPVCAICLEEFSEGQELRIISCSHEFHRECVDPWLQQHHTCPLCMFNILARDSVDQAPVAGSRLAPRDMEPGRRLHLFRQHPGHALYHLPHAYPQRNLRSFPPEPAHGNPFFHSPELSQLDFSTIHYMPYRPATSLPACSHPSPLVPGLQGQQHPSPTACGQPPTPHRMCPLQPQPPCLGLKAALAQRQHRAPALRRGAGHGHQHNSSGSGESYLTEHSGYLADGPGSDSSSGPCHGSSSDSMLNCTDVSLQGIHGSCSTFRSSLSSDYDPFVYCSSEGPATDNGQERQRPPRETRPRSLDLVVPGGAAPSKAQVLSHVHYHHHQHHHYRRDAECPPGRAGQGPGQRKSRYSGTKVGFHGARMQKRAEKSHHCQQPVEGSTVLQEAPPAGQTACSQQGREPPHVPSASLNRLDFSLDATRQSGAAGTSPVLLLQRHSLQSRHHRRKRKCPLEPDPSLLPEDSALPKACDTHISHGHPTGHRCSPEVQPLIPSASLPCSLGARPLWKCLVPQSSSELKKQEEGMSGWEGNHTVPAGFSGMGTAKHNLSLRLHCPPQQCSQGSEEEVQDVHEHSV
SIO_010081: RNF43
subclass of: SO_0000673
so part of: RNF43
location: complement(join(722048..722091,729948..731477,731867..731969,732510..732665,733270..733371,733880..734011,735325..735399,739715..739837,783450..783686))
location: region:722048-783686:-1
so has part: feature:783450-783686:-1:exon
so has part: feature:739715-739837:-1:exon
so has part: feature:735325-735399:-1:exon
so has part: feature:733880-734011:-1:exon
so has part: feature:733270-733371:-1:exon
so has part: feature:732510-732665:-1:exon
so has part: feature:731867-731969:-1:exon
so has part: feature:729948-731477:-1:exon
so has part: feature:722048-722091:-1:exon

XP_032056937.1
type: Protein
SIO_000068: ncbiprotein

position:722048:-1
position: 722048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:783450-783686:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:739715-739837:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:735325-735399:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:733880-734011:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:733270-733371:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:732510-732665:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:731867-731969:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:729948-731477:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:722048-722091:-1:exon

HSF5
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: HSF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(788512..816330)
location: region:788512-816330:-1
so has part: feature:788512-816330:-1:exon
subclass of: SO_0000010

116497112
type: Gene
SIO_000068: ncbigene

position:788512:-1
position: 788512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816330:-1
position: 816330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:788512-816330:-1:exon

HSF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: HSF5
product: heat shock transcription factor 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_032200642.1
SIO_010081: HSF5
subclass of: SO_0000673
so part of: HSF5
location: complement(join(788512..788579,793101..793267,796136..796137,798219..798749,803141..803238,812505..812876,815742..816330))
location: region:788512-816330:-1
so has part: feature:815742-816330:-1:exon
so has part: feature:812505-812876:-1:exon
so has part: feature:803141-803238:-1:exon
so has part: feature:798219-798749:-1:exon
so has part: feature:796136-796137:-1:exon
so has part: feature:793101-793267:-1:exon
so has part: feature:788512-788579:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:815742-816330:-1:exon

position:815742:-1
position: 815742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:812505-812876:-1:exon

position:812505:-1
position: 812505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812876:-1
position: 812876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:803141-803238:-1:exon

position:803141:-1
position: 803141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803238:-1
position: 803238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:798219-798749:-1:exon

position:798219:-1
position: 798219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798749:-1
position: 798749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:796136-796137:-1:exon

position:796136:-1
position: 796136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:796137:-1
position: 796137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:793101-793267:-1:exon

position:793101:-1
position: 793101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793267:-1
position: 793267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:788512-788579:-1:exon

position:788579:-1
position: 788579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HSF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: HSF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock factor protein 5
translation: MEEPLLPAPINPNNFPAKLWRLVNSPLFRSIRWDARGEGLLIDQPLFESELLGAGPGRNAGPGGDGAAGAGDLFKTTNFTSFIRQLNLYGFRKVVMGPAGGAAGTGPGPGPGPGLGPGGDGGSGGPLHHFHSPHFRRDRPDLLVHLKRLTSANKAKLAAGLEVTSRPPNRFQRLLGASLHGDLLLPPSTPGKAERPGLLTVGQFHGPYHQDSLFPYSYISASSHNHSTLPSKSLDRTPVPSRTWQNSLGFVPGHEASPAFSDKGVAFPVLQRFPTEVTYTLQPSTSSVPLQQRSQAIATSPPKYSSYTSSMQFSQTYYPTAALQCCSPTTHIDPLTGYASPTASTYTHCSFFQSPPMQSPYAVEFLPSNWPCNTSDENKKTEVNLEAVFQIVDEMHSTPKAEMVKVEAVENPCSSPRSNRSQPLLVDTENSDPPSPNEESQLEPLTPVASDITSFVMGADQEMTCPLSQPTEFLYTLRTSSSVESGAAQILQEPVTMQEARAKLGEQQDHFPTPSSVIFVQEGQQFSPQKVKTKAKCQSDTSETAVSLEEMGLLTSGTGPVNKSAVSSAQPRSRERRNTTQKSKSPDLHLLVDVACKQGHFPKEEIRE
SIO_010081: HSF5
subclass of: SO_0000673
so part of: HSF5
location: complement(join(788512..788579,793101..793267,796136..796137,798219..798749,803141..803238,812505..812876,815742..816330))
location: region:788512-816330:-1
so has part: feature:815742-816330:-1:exon
so has part: feature:812505-812876:-1:exon
so has part: feature:803141-803238:-1:exon
so has part: feature:798219-798749:-1:exon
so has part: feature:796136-796137:-1:exon
so has part: feature:793101-793267:-1:exon
so has part: feature:788512-788579:-1:exon

XP_032056533.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:815742-816330:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:812505-812876:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:803141-803238:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:798219-798749:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:796136-796137:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:793101-793267:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:788512-788579:-1:exon

MTMR4
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: MTMR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(822717..875840)
location: region:822717-875840:-1
so has part: feature:822717-875840:-1:exon
subclass of: SO_0000010

116497119
type: Gene
SIO_000068: ncbigene

position:822717:-1
position: 822717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875840:-1
position: 875840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:822717-875840:-1:exon

MTMR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: MTMR4
product: myotubularin related protein 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032200649.1
SIO_010081: MTMR4
subclass of: SO_0000673
so part of: MTMR4
location: complement(join(822717..824933,825345..825433,825753..825863,826242..827472,827836..827990,828112..828282,829040..829225,829704..829899,830279..830390,830693..830821,831074..831270,836498..836611,843577..843673,845079..845245,845465..845547,846242..846358,848841..848930,859350..859420,875800..875840))
location: region:822717-875840:-1
so has part: feature:875800-875840:-1:exon
so has part: feature:859350-859420:-1:exon
so has part: feature:848841-848930:-1:exon
so has part: feature:846242-846358:-1:exon
so has part: feature:845465-845547:-1:exon
so has part: feature:845079-845245:-1:exon
so has part: feature:843577-843673:-1:exon
so has part: feature:836498-836611:-1:exon
so has part: feature:831074-831270:-1:exon
so has part: feature:830693-830821:-1:exon
so has part: feature:830279-830390:-1:exon
so has part: feature:829704-829899:-1:exon
so has part: feature:829040-829225:-1:exon
so has part: feature:828112-828282:-1:exon
so has part: feature:827836-827990:-1:exon
so has part: feature:826242-827472:-1:exon
so has part: feature:825753-825863:-1:exon
so has part: feature:825345-825433:-1:exon
so has part: feature:822717-824933:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:875800-875840:-1:exon

position:875800:-1
position: 875800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:859350-859420:-1:exon

position:859350:-1
position: 859350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859420:-1
position: 859420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:848841-848930:-1:exon

position:848841:-1
position: 848841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:848930:-1
position: 848930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:846242-846358:-1:exon

position:846242:-1
position: 846242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846358:-1
position: 846358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:845465-845547:-1:exon

position:845465:-1
position: 845465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845547:-1
position: 845547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:845079-845245:-1:exon

position:845079:-1
position: 845079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845245:-1
position: 845245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:843577-843673:-1:exon

position:843577:-1
position: 843577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:843673:-1
position: 843673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:836498-836611:-1:exon

position:836498:-1
position: 836498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:836611:-1
position: 836611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:831074-831270:-1:exon

position:831074:-1
position: 831074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831270:-1
position: 831270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:830693-830821:-1:exon

position:830693:-1
position: 830693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830821:-1
position: 830821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:830279-830390:-1:exon

position:830279:-1
position: 830279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830390:-1
position: 830390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:829704-829899:-1:exon

position:829704:-1
position: 829704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829899:-1
position: 829899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:829040-829225:-1:exon

position:829040:-1
position: 829040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829225:-1
position: 829225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:828112-828282:-1:exon

position:828112:-1
position: 828112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:828282:-1
position: 828282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:827836-827990:-1:exon

position:827836:-1
position: 827836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827990:-1
position: 827990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:826242-827472:-1:exon

position:826242:-1
position: 826242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827472:-1
position: 827472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:825753-825863:-1:exon

position:825753:-1
position: 825753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:825863:-1
position: 825863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:825345-825433:-1:exon

position:825345:-1
position: 825345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:825433:-1
position: 825433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:822717-824933:-1:exon

position:824933:-1
position: 824933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MTMR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: MTMR4
product: myotubularin related protein 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032200651.1
SIO_010081: MTMR4
subclass of: SO_0000673
so part of: MTMR4
location: complement(join(822717..824933,825345..825433,825753..825863,826242..827472,827836..827990,828112..828282,829040..829225,829704..829899,830279..830390,830693..830821,831074..831270,836498..836611,843577..843673,845079..845245,845465..845547,846242..846358,848841..848930,859350..859420,875162..875233))
location: region:822717-875233:-1
so has part: feature:875162-875233:-1:exon
so has part: feature:859350-859420:-1:exon
so has part: feature:848841-848930:-1:exon
so has part: feature:846242-846358:-1:exon
so has part: feature:845465-845547:-1:exon
so has part: feature:845079-845245:-1:exon
so has part: feature:843577-843673:-1:exon
so has part: feature:836498-836611:-1:exon
so has part: feature:831074-831270:-1:exon
so has part: feature:830693-830821:-1:exon
so has part: feature:830279-830390:-1:exon
so has part: feature:829704-829899:-1:exon
so has part: feature:829040-829225:-1:exon
so has part: feature:828112-828282:-1:exon
so has part: feature:827836-827990:-1:exon
so has part: feature:826242-827472:-1:exon
so has part: feature:825753-825863:-1:exon
so has part: feature:825345-825433:-1:exon
so has part: feature:822717-824933:-1:exon

position:875233:-1
position: 875233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875162-875233:-1:exon

position:875162:-1
position: 875162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:859350-859420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:848841-848930:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846242-846358:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:845465-845547:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:845079-845245:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:843577-843673:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:836498-836611:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:831074-831270:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:830693-830821:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:830279-830390:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:829704-829899:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:829040-829225:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:828112-828282:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:827836-827990:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:826242-827472:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:825753-825863:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:825345-825433:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:822717-824933:-1:exon

MTMR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: MTMR4
product: myotubularin related protein 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032200648.1
SIO_010081: MTMR4
subclass of: SO_0000673
so part of: MTMR4
location: complement(join(822717..824933,825345..825433,825753..825863,826242..827472,827836..827990,828112..828282,829040..829225,829704..829899,830279..830390,830693..830821,831074..831270,836498..836611,843577..843673,845079..845245,845465..845547,846242..846358,848841..848930,850979..851419))
location: region:822717-851419:-1
so has part: feature:850979-851419:-1:exon
so has part: feature:848841-848930:-1:exon
so has part: feature:846242-846358:-1:exon
so has part: feature:845465-845547:-1:exon
so has part: feature:845079-845245:-1:exon
so has part: feature:843577-843673:-1:exon
so has part: feature:836498-836611:-1:exon
so has part: feature:831074-831270:-1:exon
so has part: feature:830693-830821:-1:exon
so has part: feature:830279-830390:-1:exon
so has part: feature:829704-829899:-1:exon
so has part: feature:829040-829225:-1:exon
so has part: feature:828112-828282:-1:exon
so has part: feature:827836-827990:-1:exon
so has part: feature:826242-827472:-1:exon
so has part: feature:825753-825863:-1:exon
so has part: feature:825345-825433:-1:exon
so has part: feature:822717-824933:-1:exon

position:851419:-1
position: 851419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:850979-851419:-1:exon

position:850979:-1
position: 850979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:848841-848930:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:846242-846358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:845465-845547:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:845079-845245:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:843577-843673:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:836498-836611:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:831074-831270:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:830693-830821:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:830279-830390:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:829704-829899:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:829040-829225:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:828112-828282:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:827836-827990:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:826242-827472:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:825753-825863:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:825345-825433:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:822717-824933:-1:exon

MTMR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: MTMR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 4 isoform X2
translation: MGEEGPPSLEYIQAKDLFPPKELVKEEESLQVPFTVLQGEGVEYLGHANDAVIAISNYRLHIKFKDSVINVPLRMMESVECRDMFQLHIVCKDSKVIRCHFSTFKQCQEWLKRLNRAIARPAKPEDLFAFAYHAWCLGVCVDEEDQHAHLCRPGDHVRYRFEMELVRMGFDLQNVWRVSDINNNYKLCSSYPQKLLVPVWITDKELENVASFRSWKRIPVVVYRHVRNGAVIARCSQPEISWWGWRNADDEYLVTSIAKACALNPGIKVPGGMPHNGSSDGSEACEADFDSSLTACSGVENAGTPQKLLILDARSYTAAVANRAKGGGCECEEYYPNCEVVFMGMANIHSIRNSFQYLRAVCSQVPDPSNWLSALESTKWLQHLSVMLKSAVLVSSAIDREGRPVLVHCSDGWDRTPQIVALAKILLDPYYRTMEGFQVLVESDWLDFGHKFGDRCGHQEKVEDQNEQCPVFLQWLDAVHQLLKQFPCLFEFNEAFLVKLVQHTYSCLYGTFLGNSPCEREMHNIYKRTCSVWSLLRAGNKNFHNLLYMPGSEQVLHPVCHVRALHVWTAVYLPASSPHPLGQDDMDIYMPPGSQSQEFSGRCLDRLPKTRSMDDLLSACDSSSPLTRTSSDPNLNNHCQEVRVGLEARHATAEGAELHVGEGSVMAAGEAGEVEEHQQNAPLQASSVFSGCAEHEVHSKQQSSWASVPASSVSLEMEKGNVTYMEELDGACPAPNPSKQENVDRVPTSSEKQLETCCQEPLKAADFACSGGGCPKKNTTCQDIPSQESLAPSAPCQELGILCLDEDKGKSDARRNGPCEEPCRLGRVPLEQWRKPISQSQSSEFSFLGSNWDSFQGMVTSLPNGEPAPRHLLSYGCCSKRLSSKQLRVPGLCLSSQWSAREGAKASVCSGHVGTHFAGSAVKPSRSGLPCHLKQVSGPKHVPPKCPSPVPPLYLDDDGLPFPTDVIQHRLRQIEASYKQEVEQLRRQVRELQLRLDIRHFCAPPAEPPMDYEDDFTCLKESDGSDSEDFCSDHSEDCLSEASWEPVDKKETEVTRWVPDHMASHCFNCDCEFWLAKRRHHCRNCGNVFCAGCCHLKLPIPDQQLYDPVLVCNSCYDHIQVSRARELMSQHLKKPIATASS
SIO_010081: MTMR4
subclass of: SO_0000673
so part of: MTMR4
location: complement(join(824756..824933,825345..825433,825753..825863,826242..827472,827836..827990,828112..828282,829040..829225,829704..829899,830279..830390,830693..830821,831074..831270,836498..836611,843577..843673,845079..845245,845465..845547,846242..846358,848841..848930,859350..859352))
location: region:824756-859352:-1
so has part: feature:859350-859352:-1:exon
so has part: feature:848841-848930:-1:exon
so has part: feature:846242-846358:-1:exon
so has part: feature:845465-845547:-1:exon
so has part: feature:845079-845245:-1:exon
so has part: feature:843577-843673:-1:exon
so has part: feature:836498-836611:-1:exon
so has part: feature:831074-831270:-1:exon
so has part: feature:830693-830821:-1:exon
so has part: feature:830279-830390:-1:exon
so has part: feature:829704-829899:-1:exon
so has part: feature:829040-829225:-1:exon
so has part: feature:828112-828282:-1:exon
so has part: feature:827836-827990:-1:exon
so has part: feature:826242-827472:-1:exon
so has part: feature:825753-825863:-1:exon
so has part: feature:825345-825433:-1:exon
so has part: feature:824756-824933:-1:exon

XP_032056540.1
type: Protein
SIO_000068: ncbiprotein

position:824756:-1
position: 824756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859352:-1
position: 859352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:859350-859352:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:848841-848930:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:846242-846358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:845465-845547:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:845079-845245:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:843577-843673:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:836498-836611:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:831074-831270:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:830693-830821:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:830279-830390:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:829704-829899:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:829040-829225:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:828112-828282:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:827836-827990:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:826242-827472:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:825753-825863:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:825345-825433:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:824756-824933:-1:exon

MTMR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: MTMR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 4 isoform X2
translation: MGEEGPPSLEYIQAKDLFPPKELVKEEESLQVPFTVLQGEGVEYLGHANDAVIAISNYRLHIKFKDSVINVPLRMMESVECRDMFQLHIVCKDSKVIRCHFSTFKQCQEWLKRLNRAIARPAKPEDLFAFAYHAWCLGVCVDEEDQHAHLCRPGDHVRYRFEMELVRMGFDLQNVWRVSDINNNYKLCSSYPQKLLVPVWITDKELENVASFRSWKRIPVVVYRHVRNGAVIARCSQPEISWWGWRNADDEYLVTSIAKACALNPGIKVPGGMPHNGSSDGSEACEADFDSSLTACSGVENAGTPQKLLILDARSYTAAVANRAKGGGCECEEYYPNCEVVFMGMANIHSIRNSFQYLRAVCSQVPDPSNWLSALESTKWLQHLSVMLKSAVLVSSAIDREGRPVLVHCSDGWDRTPQIVALAKILLDPYYRTMEGFQVLVESDWLDFGHKFGDRCGHQEKVEDQNEQCPVFLQWLDAVHQLLKQFPCLFEFNEAFLVKLVQHTYSCLYGTFLGNSPCEREMHNIYKRTCSVWSLLRAGNKNFHNLLYMPGSEQVLHPVCHVRALHVWTAVYLPASSPHPLGQDDMDIYMPPGSQSQEFSGRCLDRLPKTRSMDDLLSACDSSSPLTRTSSDPNLNNHCQEVRVGLEARHATAEGAELHVGEGSVMAAGEAGEVEEHQQNAPLQASSVFSGCAEHEVHSKQQSSWASVPASSVSLEMEKGNVTYMEELDGACPAPNPSKQENVDRVPTSSEKQLETCCQEPLKAADFACSGGGCPKKNTTCQDIPSQESLAPSAPCQELGILCLDEDKGKSDARRNGPCEEPCRLGRVPLEQWRKPISQSQSSEFSFLGSNWDSFQGMVTSLPNGEPAPRHLLSYGCCSKRLSSKQLRVPGLCLSSQWSAREGAKASVCSGHVGTHFAGSAVKPSRSGLPCHLKQVSGPKHVPPKCPSPVPPLYLDDDGLPFPTDVIQHRLRQIEASYKQEVEQLRRQVRELQLRLDIRHFCAPPAEPPMDYEDDFTCLKESDGSDSEDFCSDHSEDCLSEASWEPVDKKETEVTRWVPDHMASHCFNCDCEFWLAKRRHHCRNCGNVFCAGCCHLKLPIPDQQLYDPVLVCNSCYDHIQVSRARELMSQHLKKPIATASS
SIO_010081: MTMR4
subclass of: SO_0000673
so part of: MTMR4
location: complement(join(824756..824933,825345..825433,825753..825863,826242..827472,827836..827990,828112..828282,829040..829225,829704..829899,830279..830390,830693..830821,831074..831270,836498..836611,843577..843673,845079..845245,845465..845547,846242..846358,848841..848930,859350..859352))
location: region:824756-859352:-1
so has part: feature:859350-859352:-1:exon
so has part: feature:848841-848930:-1:exon
so has part: feature:846242-846358:-1:exon
so has part: feature:845465-845547:-1:exon
so has part: feature:845079-845245:-1:exon
so has part: feature:843577-843673:-1:exon
so has part: feature:836498-836611:-1:exon
so has part: feature:831074-831270:-1:exon
so has part: feature:830693-830821:-1:exon
so has part: feature:830279-830390:-1:exon
so has part: feature:829704-829899:-1:exon
so has part: feature:829040-829225:-1:exon
so has part: feature:828112-828282:-1:exon
so has part: feature:827836-827990:-1:exon
so has part: feature:826242-827472:-1:exon
so has part: feature:825753-825863:-1:exon
so has part: feature:825345-825433:-1:exon
so has part: feature:824756-824933:-1:exon

XP_032056542.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:859350-859352:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:848841-848930:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:846242-846358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:845465-845547:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:845079-845245:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:843577-843673:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:836498-836611:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:831074-831270:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:830693-830821:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:830279-830390:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:829704-829899:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:829040-829225:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:828112-828282:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:827836-827990:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:826242-827472:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:825753-825863:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:825345-825433:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:824756-824933:-1:exon

MTMR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: MTMR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 4 isoform X1
translation: MNMSLPGRVSCSMLNCFGEEGPPSLEYIQAKDLFPPKELVKEEESLQVPFTVLQGEGVEYLGHANDAVIAISNYRLHIKFKDSVINVPLRMMESVECRDMFQLHIVCKDSKVIRCHFSTFKQCQEWLKRLNRAIARPAKPEDLFAFAYHAWCLGVCVDEEDQHAHLCRPGDHVRYRFEMELVRMGFDLQNVWRVSDINNNYKLCSSYPQKLLVPVWITDKELENVASFRSWKRIPVVVYRHVRNGAVIARCSQPEISWWGWRNADDEYLVTSIAKACALNPGIKVPGGMPHNGSSDGSEACEADFDSSLTACSGVENAGTPQKLLILDARSYTAAVANRAKGGGCECEEYYPNCEVVFMGMANIHSIRNSFQYLRAVCSQVPDPSNWLSALESTKWLQHLSVMLKSAVLVSSAIDREGRPVLVHCSDGWDRTPQIVALAKILLDPYYRTMEGFQVLVESDWLDFGHKFGDRCGHQEKVEDQNEQCPVFLQWLDAVHQLLKQFPCLFEFNEAFLVKLVQHTYSCLYGTFLGNSPCEREMHNIYKRTCSVWSLLRAGNKNFHNLLYMPGSEQVLHPVCHVRALHVWTAVYLPASSPHPLGQDDMDIYMPPGSQSQEFSGRCLDRLPKTRSMDDLLSACDSSSPLTRTSSDPNLNNHCQEVRVGLEARHATAEGAELHVGEGSVMAAGEAGEVEEHQQNAPLQASSVFSGCAEHEVHSKQQSSWASVPASSVSLEMEKGNVTYMEELDGACPAPNPSKQENVDRVPTSSEKQLETCCQEPLKAADFACSGGGCPKKNTTCQDIPSQESLAPSAPCQELGILCLDEDKGKSDARRNGPCEEPCRLGRVPLEQWRKPISQSQSSEFSFLGSNWDSFQGMVTSLPNGEPAPRHLLSYGCCSKRLSSKQLRVPGLCLSSQWSAREGAKASVCSGHVGTHFAGSAVKPSRSGLPCHLKQVSGPKHVPPKCPSPVPPLYLDDDGLPFPTDVIQHRLRQIEASYKQEVEQLRRQVRELQLRLDIRHFCAPPAEPPMDYEDDFTCLKESDGSDSEDFCSDHSEDCLSEASWEPVDKKETEVTRWVPDHMASHCFNCDCEFWLAKRRHHCRNCGNVFCAGCCHLKLPIPDQQLYDPVLVCNSCYDHIQVSRARELMSQHLKKPIATASS
SIO_010081: MTMR4
subclass of: SO_0000673
so part of: MTMR4
location: complement(join(824756..824933,825345..825433,825753..825863,826242..827472,827836..827990,828112..828282,829040..829225,829704..829899,830279..830390,830693..830821,831074..831270,836498..836611,843577..843673,845079..845245,845465..845547,846242..846358,848841..848930,850979..851029))
location: region:824756-851029:-1
so has part: feature:850979-851029:-1:exon
so has part: feature:848841-848930:-1:exon
so has part: feature:846242-846358:-1:exon
so has part: feature:845465-845547:-1:exon
so has part: feature:845079-845245:-1:exon
so has part: feature:843577-843673:-1:exon
so has part: feature:836498-836611:-1:exon
so has part: feature:831074-831270:-1:exon
so has part: feature:830693-830821:-1:exon
so has part: feature:830279-830390:-1:exon
so has part: feature:829704-829899:-1:exon
so has part: feature:829040-829225:-1:exon
so has part: feature:828112-828282:-1:exon
so has part: feature:827836-827990:-1:exon
so has part: feature:826242-827472:-1:exon
so has part: feature:825753-825863:-1:exon
so has part: feature:825345-825433:-1:exon
so has part: feature:824756-824933:-1:exon

XP_032056539.1
type: Protein
SIO_000068: ncbiprotein

position:851029:-1
position: 851029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:850979-851029:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:848841-848930:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:846242-846358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:845465-845547:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:845079-845245:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:843577-843673:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:836498-836611:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:831074-831270:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:830693-830821:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:830279-830390:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:829704-829899:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:829040-829225:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:828112-828282:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:827836-827990:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:826242-827472:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:825753-825863:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:825345-825433:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:824756-824933:-1:exon

LOC116497120
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116497120
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 874729..880579
location: region:874729-880579:1
so has part: feature:874729-880579:1:exon
subclass of: SO_0000010

116497120
type: Gene
SIO_000068: ncbigene

position:874729:1
position: 874729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880579:1
position: 880579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:874729-880579:1:exon

LOC116497120
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116497120
product: caspase-1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032200654.1
SIO_010081: LOC116497120
subclass of: SO_0000673
so part of: LOC116497120
location: join(874729..874860,874951..875056,877616..877792,878009..878243,878370..878522,879260..879369,879728..879830,880325..880579)
location: region:874729-880579:1
so has part: feature:874729-874860:1:exon
so has part: feature:874951-875056:1:exon
so has part: feature:877616-877792:1:exon
so has part: feature:878009-878243:1:exon
so has part: feature:878370-878522:1:exon
so has part: feature:879260-879369:1:exon
so has part: feature:879728-879830:1:exon
so has part: feature:880325-880579:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:874729-874860:1:exon

position:874860:1
position: 874860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:874951-875056:1:exon

position:874951:1
position: 874951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875056:1
position: 875056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:877616-877792:1:exon

position:877616:1
position: 877616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877792:1
position: 877792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:878009-878243:1:exon

position:878009:1
position: 878009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878243:1
position: 878243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:878370-878522:1:exon

position:878370:1
position: 878370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878522:1
position: 878522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:879260-879369:1:exon

position:879260:1
position: 879260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879369:1
position: 879369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:879728-879830:1:exon

position:879728:1
position: 879728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879830:1
position: 879830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:880325-880579:1:exon

position:880325:1
position: 880325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116497120
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116497120
product: caspase-1-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032200655.1
SIO_010081: LOC116497120
subclass of: SO_0000673
so part of: LOC116497120
location: join(874742..874805,874914..875056,877616..877792,878009..878243,878370..878522,879260..879369,879728..879830,880325..880579)
location: region:874742-880579:1
so has part: feature:874742-874805:1:exon
so has part: feature:874914-875056:1:exon
so has part: feature:877616-877792:1:exon
so has part: feature:878009-878243:1:exon
so has part: feature:878370-878522:1:exon
so has part: feature:879260-879369:1:exon
so has part: feature:879728-879830:1:exon
so has part: feature:880325-880579:1:exon

position:874742:1
position: 874742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:874742-874805:1:exon

position:874805:1
position: 874805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:874914-875056:1:exon

position:874914:1
position: 874914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:877616-877792:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:878009-878243:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:878370-878522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:879260-879369:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:879728-879830:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:880325-880579:1:exon

LOC116497120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116497120
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caspase-1-like isoform X3
translation: MWITSSQLRSGTDILGGEPGLPAGINLLPNSLGASAMVRPHPSPEALQQTENRGSMKLHWRVGQQGRKKKIYPILLPRETRTRRALLICNTEFEYLSQREGAEVDVKEMTKLLEGLGYRVDFHENLTSQEMDVVMKDFAGHKDHLTSDSTFLVFMSHGRRTGLCGTKSRDETTDILSLDTIYENFNNKHCKALIGKPKVVIIQSCRGDNSGAVLVSDSAISKMPALSSDSTNAVKQQCRELRLIHLESDFATLYSSTPDTISWRSPVTGSIFIQRLVEQFRSHAFNSDLQELFRKVQRSFEDFPKQLPTQERTTMLRKFYLFPGH
SIO_010081: LOC116497120
subclass of: SO_0000673
so part of: LOC116497120
location: join(874757..874860,874951..875056,877616..877792,878009..878243,878370..878522,879260..879369,879728..879820)
location: region:874757-879820:1
so has part: feature:874757-874860:1:exon
so has part: feature:874951-875056:1:exon
so has part: feature:877616-877792:1:exon
so has part: feature:878009-878243:1:exon
so has part: feature:878370-878522:1:exon
so has part: feature:879260-879369:1:exon
so has part: feature:879728-879820:1:exon

XP_032056545.1
type: Protein
SIO_000068: ncbiprotein

position:874757:1
position: 874757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879820:1
position: 879820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:874757-874860:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:874951-875056:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:877616-877792:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:878009-878243:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:878370-878522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:879260-879369:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:879728-879820:1:exon

LOC116497120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116497120
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caspase-1-like isoform X4
translation: MWITSSQLRSGTDILGDVDVSLRTTTHGSAMVRPHPSPEALQQTENRGSMKLHWRVGQQGRKKKIYPILLPRETRTRRALLICNTEFEYLSQREGAEVDVKEMTKLLEGLGYRVDFHENLTSQEMDVVMKDFAGHKDHLTSDSTFLVFMSHGRRTGLCGTKSRDETTDILSLDTIYENFNNKHCKALIGKPKVVIIQSCRGDNSGAVLVSDSAISKMPALSSDSTNAVKQQCRELRLIHLESDFATLYSSTPDTISWRSPVTGSIFIQRLVEQFRSHAFNSDLQELFRKVQRSFEDFPKQLPTQERTTMLRKFYLFPGH
SIO_010081: LOC116497120
subclass of: SO_0000673
so part of: LOC116497120
location: join(874757..874805,874914..875056,877616..877792,878009..878243,878370..878522,879260..879369,879728..879820)
location: region:874757-879820:1
so has part: feature:874757-874805:1:exon
so has part: feature:874914-875056:1:exon
so has part: feature:877616-877792:1:exon
so has part: feature:878009-878243:1:exon
so has part: feature:878370-878522:1:exon
so has part: feature:879260-879369:1:exon
so has part: feature:879728-879820:1:exon

XP_032056546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:874757-874805:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:874914-875056:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:877616-877792:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:878009-878243:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:878370-878522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:879260-879369:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:879728-879820:1:exon

LOC116497120
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116497120
product: caspase-1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032200652.1
SIO_010081: LOC116497120
subclass of: SO_0000673
so part of: LOC116497120
location: join(876387..876416,876722..876994,877282..877385,877616..877792,878009..878243,878370..878522,879260..879369,879728..879830,880325..880579)
location: region:876387-880579:1
so has part: feature:876387-876416:1:exon
so has part: feature:876722-876994:1:exon
so has part: feature:877282-877385:1:exon
so has part: feature:877616-877792:1:exon
so has part: feature:878009-878243:1:exon
so has part: feature:878370-878522:1:exon
so has part: feature:879260-879369:1:exon
so has part: feature:879728-879830:1:exon
so has part: feature:880325-880579:1:exon

position:876387:1
position: 876387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:876387-876416:1:exon

position:876416:1
position: 876416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:876722-876994:1:exon

position:876722:1
position: 876722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876994:1
position: 876994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:877282-877385:1:exon

position:877282:1
position: 877282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877385:1
position: 877385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:877616-877792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:878009-878243:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:878370-878522:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:879260-879369:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:879728-879830:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:880325-880579:1:exon

LOC116497120
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116497120
product: caspase-1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032200653.1
SIO_010081: LOC116497120
subclass of: SO_0000673
so part of: LOC116497120
location: join(876387..876416,876722..876994,877282..877385,877616..877792,878009..878243,879260..879369,879728..879830,880325..880579)
location: region:876387-880579:1
so has part: feature:876387-876416:1:exon
so has part: feature:876722-876994:1:exon
so has part: feature:877282-877385:1:exon
so has part: feature:877616-877792:1:exon
so has part: feature:878009-878243:1:exon
so has part: feature:879260-879369:1:exon
so has part: feature:879728-879830:1:exon
so has part: feature:880325-880579:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:876387-876416:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:876722-876994:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:877282-877385:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:877616-877792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:878009-878243:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:879260-879369:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:879728-879830:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:880325-880579:1:exon

LOC116497120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116497120
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caspase-1-like isoform X1
translation: MADQELLRVRADFVERVRKPVISKLLDDLLAHKVLSQGEVDEVQEGNAVTGDKARCLIDAVRLKGSKASQIFIDSLRKHDHTLVEQLGLATGSGSPGVQPPVSIQGQQWIRQCSLSEYQRIQEAEGNQIYPILLPRETRTRRALLICNTEFEYLSQREGAEVDVKEMTKLLEGLGYRVDFHENLTSQEMDVVMKDFAGHKDHLTSDSTFLVFMSHGRRTGLCGTKSRDETTDILSLDTIYENFNNKHCKALIGKPKVVIIQSCRGDNSGAVLVSDSAISKMPALSSDSTNAVKQQCRELRLIHLESDFATLYSSTPDTISWRSPVTGSIFIQRLVEQFRSHAFNSDLQELFRKVQRSFEDFPKQLPTQERTTMLRKFYLFPGH
SIO_010081: LOC116497120
subclass of: SO_0000673
so part of: LOC116497120
location: join(876410..876416,876722..876994,877282..877385,877616..877792,878009..878243,878370..878522,879260..879369,879728..879820)
location: region:876410-879820:1
so has part: feature:876410-876416:1:exon
so has part: feature:876722-876994:1:exon
so has part: feature:877282-877385:1:exon
so has part: feature:877616-877792:1:exon
so has part: feature:878009-878243:1:exon
so has part: feature:878370-878522:1:exon
so has part: feature:879260-879369:1:exon
so has part: feature:879728-879820:1:exon

XP_032056543.1
type: Protein
SIO_000068: ncbiprotein

position:876410:1
position: 876410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:876410-876416:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:876722-876994:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:877282-877385:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:877616-877792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:878009-878243:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:878370-878522:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:879260-879369:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:879728-879820:1:exon

LOC116497120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116497120
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caspase-1-like isoform X2
translation: MADQELLRVRADFVERVRKPVISKLLDDLLAHKVLSQGEVDEVQEGNAVTGDKARCLIDAVRLKGSKASQIFIDSLRKHDHTLVEQLGLATGSGSPGVQPPVSIQGQQWIRQCSLSEYQRIQEAEGNQIYPILLPRETRTRRALLICNTEFEYLSQREGAEVDVKEMTKLLEGLGYRVDFHENLTSQEMDVVMKDFAGHKDHLTSDSTFLVFMSHGRRTGLCGTKSRDETTDILSLDTIYENFNNKHCKALIGKPKVVIIQSCRGDTISWRSPVTGSIFIQRLVEQFRSHAFNSDLQELFRKVQRSFEDFPKQLPTQERTTMLRKFYLFPGH
SIO_010081: LOC116497120
subclass of: SO_0000673
so part of: LOC116497120
location: join(876410..876416,876722..876994,877282..877385,877616..877792,878009..878243,879260..879369,879728..879820)
location: region:876410-879820:1
so has part: feature:876410-876416:1:exon
so has part: feature:876722-876994:1:exon
so has part: feature:877282-877385:1:exon
so has part: feature:877616-877792:1:exon
so has part: feature:878009-878243:1:exon
so has part: feature:879260-879369:1:exon
so has part: feature:879728-879820:1:exon

XP_032056544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:876410-876416:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:876722-876994:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:877282-877385:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:877616-877792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:878009-878243:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:879260-879369:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:879728-879820:1:exon

ABHD11
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: ABHD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(881584..884067)
location: region:881584-884067:-1
so has part: feature:881584-884067:-1:exon
subclass of: SO_0000010

116497253
type: Gene
SIO_000068: ncbigene

position:881584:-1
position: 881584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884067:-1
position: 884067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:881584-884067:-1:exon

ABHD11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ABHD11
product: abhydrolase domain containing 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032200919.1
SIO_010081: ABHD11
subclass of: SO_0000673
so part of: ABHD11
location: complement(join(881584..882086,882379..882560,882841..883011,883265..883438,883556..883691,884006..884067))
location: region:881584-884067:-1
so has part: feature:884006-884067:-1:exon
so has part: feature:883556-883691:-1:exon
so has part: feature:883265-883438:-1:exon
so has part: feature:882841-883011:-1:exon
so has part: feature:882379-882560:-1:exon
so has part: feature:881584-882086:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:884006-884067:-1:exon

position:884006:-1
position: 884006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:883556-883691:-1:exon

position:883556:-1
position: 883556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883691:-1
position: 883691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:883265-883438:-1:exon

position:883265:-1
position: 883265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883438:-1
position: 883438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:882841-883011:-1:exon

position:882841:-1
position: 882841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883011:-1
position: 883011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:882379-882560:-1:exon

position:882379:-1
position: 882379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:882560:-1
position: 882560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:881584-882086:-1:exon

position:882086:-1
position: 882086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ABHD11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: ABHD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ABHD11
translation: MLRRLPRRPLPPPPAARSAVTAVPLSHAALGPAGPRPPLVLLHGLFGSRGSLQTVANALARRSGSQVLTLDARNHGGSPHSPVMTYEAMSLDVQQLLARLGVPKCILLGHSMGGKTAMALALQRPDLVERLISVDISPVSTTLVSEFSAYISAMKSVNIPAGLSRSAARQLADSQLSPVVQHPQLRQFLLTNLVEVEGHYVWRVNLEAISHHLEDIMSFPVFHKPYPGPTLFLGGSNSPYISSKDYPEIQRLFPKADIQFIEGAGHIVHQDKFEDFITAVLNFLPPP
SIO_010081: ABHD11
subclass of: SO_0000673
so part of: ABHD11
location: complement(join(881948..882086,882379..882560,882841..883011,883265..883438,883556..883691,884006..884067))
location: region:881948-884067:-1
so has part: feature:884006-884067:-1:exon
so has part: feature:883556-883691:-1:exon
so has part: feature:883265-883438:-1:exon
so has part: feature:882841-883011:-1:exon
so has part: feature:882379-882560:-1:exon
so has part: feature:881948-882086:-1:exon

XP_032056810.1
type: Protein
SIO_000068: ncbiprotein

position:881948:-1
position: 881948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:884006-884067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:883556-883691:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:883265-883438:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:882841-883011:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:882379-882560:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:881948-882086:-1:exon

CLDN3
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: CLDN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(886327..886971)
location: region:886327-886971:-1
so has part: feature:886327-886971:-1:exon
subclass of: SO_0000010

116497304
type: Gene
SIO_000068: ncbigene

position:886327:-1
position: 886327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886971:-1
position: 886971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:886327-886971:-1:exon

CLDN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: CLDN3
product: claudin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 Proteins
transcript id: XM_032200993.1
SIO_010081: CLDN3
subclass of: SO_0000673
so part of: CLDN3
location: complement(886327..886971)
location: region:886327-886971:-1
so has part: feature:886327-886971:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:886327-886971:-1:exon

CLDN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: CLDN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: claudin-3
translation: MSMGLEIGGVALSVLGWLCSIICCALPMWRVSAFIGNNIVTAQIIWEGLWMNCVVQSTGQMQCKVYDSMLALPQDLQAARALLVVAIVLAVLGLMVAIVGAQCTRCVEDETTKAKITIVSGVIFLLSGIMTLIPVSWSANTIIRDFYNPLVLESQKRELGTSLYVGWAAAALLLFGGSLLCCSCPPKDERYAPSKVAYSAPRSAVTSYDKRNYV
SIO_010081: CLDN3
subclass of: SO_0000673
so part of: CLDN3
location: complement(886327..886971)
location: region:886327-886971:-1
so has part: feature:886327-886971:-1:exon

XP_032056884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:886327-886971:-1:exon

LOC116497305
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116497305
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 893986..894615
location: region:893986-894615:1
so has part: feature:893986-894615:1:exon
subclass of: SO_0000010

116497305
type: Gene
SIO_000068: ncbigene

position:893986:1
position: 893986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894615:1
position: 894615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:893986-894615:1:exon

LOC116497305
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116497305
product: claudin-4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 Proteins
transcript id: XM_032200994.1
SIO_010081: LOC116497305
subclass of: SO_0000673
so part of: LOC116497305
location: 893986..894615
location: region:893986-894615:1
so has part: feature:893986-894615:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:893986-894615:1:exon

LOC116497305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116497305
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: claudin-4-like
translation: MASMGLQVLGIALSVIGWLASILCCALPMWRETAFVGNNIVVAQIIWEGLWMNCVVQSTGQMQCRVYDSLLALPQDLQAARALVVVAIVLAVLGTLLAVAGGKCTNCVEDETAKAKVMILSGVTFIIAGVLILIPISWSANSIIRDFYNPLVAESQKRDLGSSLYVGWAASALLLLGGGILCCTCPPRGEKPYSAKYTASRSLPASNYV
SIO_010081: LOC116497305
subclass of: SO_0000673
so part of: LOC116497305
location: 893986..894615
location: region:893986-894615:1
so has part: feature:893986-894615:1:exon

XP_032056885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:893986-894615:1:exon

LOC116497313
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116497313
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 897556..898200
location: region:897556-898200:1
so has part: feature:897556-898200:1:exon
subclass of: SO_0000010

116497313
type: Gene
SIO_000068: ncbigene

position:897556:1
position: 897556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898200:1
position: 898200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:897556-898200:1:exon

LOC116497313
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116497313
product: claudin-3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins
transcript id: XM_032201003.1
SIO_010081: LOC116497313
subclass of: SO_0000673
so part of: LOC116497313
location: 897556..898200
location: region:897556-898200:1
so has part: feature:897556-898200:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:897556-898200:1:exon

LOC116497313
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116497313
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: claudin-3-like
translation: MATMTMQLGGLVLAVLGWLGSILTCALPMWKVTAFIGYNIVVAQVFWEGLWMNCVYESTGQMQCKVYDSLLDLTSDLQAARALVVTSIIVAFFALLTAISGADCTRCVEDKNSKMRVSIVAGAIFVLAGIVLLIPVSWSANSIVTNFYNPMVPEALKRELGAALYIGWASSALQLFGGGILCCSGPPSQRDHYPRKYRAVKSCSPMGYPMKDYV
SIO_010081: LOC116497313
subclass of: SO_0000673
so part of: LOC116497313
location: 897556..898200
location: region:897556-898200:1
so has part: feature:897556-898200:1:exon

XP_032056894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:897556-898200:1:exon

METTL27
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: METTL27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(898789..901296)
location: region:898789-901296:-1
so has part: feature:898789-901296:-1:exon
subclass of: SO_0000010

116497255
type: Gene
SIO_000068: ncbigene

position:898789:-1
position: 898789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901296:-1
position: 901296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:898789-901296:-1:exon

METTL27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: METTL27
product: methyltransferase like 27
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032200925.1
SIO_010081: METTL27
subclass of: SO_0000673
so part of: METTL27
location: complement(join(898789..900293,900535..900627,900703..900838,900923..901051,901189..901296))
location: region:898789-901296:-1
so has part: feature:901189-901296:-1:exon
so has part: feature:900923-901051:-1:exon
so has part: feature:900703-900838:-1:exon
so has part: feature:900535-900627:-1:exon
so has part: feature:898789-900293:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:901189-901296:-1:exon

position:901189:-1
position: 901189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:900923-901051:-1:exon

position:900923:-1
position: 900923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901051:-1
position: 901051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:900703-900838:-1:exon

position:900703:-1
position: 900703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900838:-1
position: 900838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:900535-900627:-1:exon

position:900535:-1
position: 900535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900627:-1
position: 900627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:898789-900293:-1:exon

position:900293:-1
position: 900293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

METTL27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: METTL27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyltransferase-like protein 27
translation: MLPPAGVRERVRAVHGGAALPELLRRYDGWAGRYEQDVAALEYRAPHLAAASLAFAFPAPPAGARVLDVGCGTGLVARELQRRGFGCLHGVDGSAGMLERARGTGLYRQLQRCVLGREPLPGPAEHYDAVTVVGALGEGQVPCSALPELLRVTKPGGFLCLTTRSNPSNLRYKAELEAALQRLEQQGAWQKVLAQEVERWERATEEEESVQGTGYISGVVYIYRKCPVPPLEEG
SIO_010081: METTL27
subclass of: SO_0000673
so part of: METTL27
location: complement(join(900055..900293,900535..900627,900703..900838,900923..901051,901189..901296))
location: region:900055-901296:-1
so has part: feature:901189-901296:-1:exon
so has part: feature:900923-901051:-1:exon
so has part: feature:900703-900838:-1:exon
so has part: feature:900535-900627:-1:exon
so has part: feature:900055-900293:-1:exon

XP_032056816.1
type: Protein
SIO_000068: ncbiprotein

position:900055:-1
position: 900055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:901189-901296:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:900923-901051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:900703-900838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:900535-900627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:900055-900293:-1:exon

ELN
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: ELN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 995550..1016847
location: region:995550-1016847:1
so has part: feature:995550-1016847:1:exon
subclass of: SO_0000010

116497398
type: Gene
SIO_000068: ncbigene

position:995550:1
position: 995550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1016847:1
position: 1016847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:995550-1016847:1:exon

ELN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ELN
product: elastin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032201133.1
SIO_010081: ELN
subclass of: SO_0000673
so part of: ELN
location: join(995550..995734,1001009..1001062,1001433..1001459,1001612..1001644,1002938..1002982,1003451..1003543,1003918..1003977,1004055..1004123,1004208..1004258,1005564..1005635,1005781..1005807,1006013..1006084,1008954..1008995,1009384..1009449,1009732..1009776,1009927..1010028,1010114..1010173,1011085..1011201,1011284..1011334,1012249..1012368,1012454..1012510,1012673..1012819,1012932..1012988,1013634..1013777,1013974..1014027,1014122..1014256,1014351..1014398,1014766..1014807,1015108..1015167,1016006..1016047,1016183..1016212,1016324..1016374,1016471..1016847)
location: region:995550-1016847:1
so has part: feature:995550-995734:1:exon
so has part: feature:1001009-1001062:1:exon
so has part: feature:1001433-1001459:1:exon
so has part: feature:1001612-1001644:1:exon
so has part: feature:1002938-1002982:1:exon
so has part: feature:1003451-1003543:1:exon
so has part: feature:1003918-1003977:1:exon
so has part: feature:1004055-1004123:1:exon
so has part: feature:1004208-1004258:1:exon
so has part: feature:1005564-1005635:1:exon
so has part: feature:1005781-1005807:1:exon
so has part: feature:1006013-1006084:1:exon
so has part: feature:1008954-1008995:1:exon
so has part: feature:1009384-1009449:1:exon
so has part: feature:1009732-1009776:1:exon
so has part: feature:1009927-1010028:1:exon
so has part: feature:1010114-1010173:1:exon
so has part: feature:1011085-1011201:1:exon
so has part: feature:1011284-1011334:1:exon
so has part: feature:1012249-1012368:1:exon
so has part: feature:1012454-1012510:1:exon
so has part: feature:1012673-1012819:1:exon
so has part: feature:1012932-1012988:1:exon
so has part: feature:1013634-1013777:1:exon
so has part: feature:1013974-1014027:1:exon
so has part: feature:1014122-1014256:1:exon
so has part: feature:1014351-1014398:1:exon
so has part: feature:1014766-1014807:1:exon
so has part: feature:1015108-1015167:1:exon
so has part: feature:1016006-1016047:1:exon
so has part: feature:1016183-1016212:1:exon
so has part: feature:1016324-1016374:1:exon
so has part: feature:1016471-1016847:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:995550-995734:1:exon

position:995734:1
position: 995734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1001009-1001062:1:exon

position:1001009:1
position: 1001009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1001062:1
position: 1001062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1001433-1001459:1:exon

position:1001433:1
position: 1001433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1001459:1
position: 1001459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1001612-1001644:1:exon

position:1001612:1
position: 1001612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1001644:1
position: 1001644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1002938-1002982:1:exon

position:1002938:1
position: 1002938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1002982:1
position: 1002982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1003451-1003543:1:exon

position:1003451:1
position: 1003451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003543:1
position: 1003543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1003918-1003977:1:exon

position:1003918:1
position: 1003918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003977:1
position: 1003977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1004055-1004123:1:exon

position:1004055:1
position: 1004055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1004123:1
position: 1004123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1004208-1004258:1:exon

position:1004208:1
position: 1004208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1004258:1
position: 1004258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1005564-1005635:1:exon

position:1005564:1
position: 1005564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1005635:1
position: 1005635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1005781-1005807:1:exon

position:1005781:1
position: 1005781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1005807:1
position: 1005807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1006013-1006084:1:exon

position:1006013:1
position: 1006013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1006084:1
position: 1006084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1008954-1008995:1:exon

position:1008954:1
position: 1008954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1008995:1
position: 1008995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1009384-1009449:1:exon

position:1009384:1
position: 1009384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1009449:1
position: 1009449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1009732-1009776:1:exon

position:1009732:1
position: 1009732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1009776:1
position: 1009776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1009927-1010028:1:exon

position:1009927:1
position: 1009927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010028:1
position: 1010028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1010114-1010173:1:exon

position:1010114:1
position: 1010114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010173:1
position: 1010173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1011085-1011201:1:exon

position:1011085:1
position: 1011085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011201:1
position: 1011201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1011284-1011334:1:exon

position:1011284:1
position: 1011284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011334:1
position: 1011334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1012249-1012368:1:exon

position:1012249:1
position: 1012249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012368:1
position: 1012368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1012454-1012510:1:exon

position:1012454:1
position: 1012454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012510:1
position: 1012510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1012673-1012819:1:exon

position:1012673:1
position: 1012673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012819:1
position: 1012819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1012932-1012988:1:exon

position:1012932:1
position: 1012932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012988:1
position: 1012988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1013634-1013777:1:exon

position:1013634:1
position: 1013634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013777:1
position: 1013777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1013974-1014027:1:exon

position:1013974:1
position: 1013974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1014027:1
position: 1014027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1014122-1014256:1:exon

position:1014122:1
position: 1014122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1014256:1
position: 1014256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1014351-1014398:1:exon

position:1014351:1
position: 1014351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1014398:1
position: 1014398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1014766-1014807:1:exon

position:1014766:1
position: 1014766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1014807:1
position: 1014807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1015108-1015167:1:exon

position:1015108:1
position: 1015108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1015167:1
position: 1015167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1016006-1016047:1:exon

position:1016006:1
position: 1016006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1016047:1
position: 1016047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1016183-1016212:1:exon

position:1016183:1
position: 1016183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1016212:1
position: 1016212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1016324-1016374:1:exon

position:1016324:1
position: 1016324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1016374:1
position: 1016374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1016471-1016847:1:exon

position:1016471:1
position: 1016471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ELN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: ELN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elastin
translation: MAKQAAAPLLPGVLLLFSILPASQQGGVPGAIPGGGVPGGGFFPGAGVGGLGAGLGAGGKPLKPGVGGLGGLGPLGLQPGAAGLLPGGGFPGGVFPGAASAAALKAAAKAGAGLGGVGGVGVPGGLGVSAGAVVPPGGVQPGVGAAGKPPKVPGAGIPGAFPGGGVLPGAGVRFPGVGVLPGVPTGTGVKAKGPGAGAFAGIPGLGGFGGQQPGVPLGYPIKAPKLPGGYGLPYSTGKLPYGLGPGGIGAGLGAGKAGYPTGTGVGAQAAAAKAAAKYGAGVLPGAGGIPGVGGIPGVGGVVPGVGVVPGAGVGGPAAAAAAAKAAAKAGAYGAGVLPGVGGVPGLVPGVGGVPGGVPSLVPGVGGVPGVAGVGTPAAAAAAAKAAKYGAGVGVPGVGVPGIGGVPGVPGVAGVPGVAGVPGVVPGVGVGGPAAAAAAKAAAKAAAFGAGVPGAGVPGVGVPGVGIPGVGVPGVGVPGVGVPGVGVPGVGVPGLVPGAGPAAAAAAKAAAKAAKYGAGGLAPGVGGLAPGIGGLAPGVGGLAPGVGGLVPGVGGLAPGVGGVPGVGGPAAAAKAAAKAAKYGAGVGGVPGAVPGGPGVPGVTPGVGGVPGLVPGVGVPGAGVLPGAGIPQVGVQPGAKPPKFGVPGAGVPGVGGIPGGLGVGGLGVGGLGAGGLGAGPGVPGFGVSPIFPGGVGGQLGFGGKPPKTFGGALGALGFRGGVGCAQGKYCGRKRK
SIO_010081: ELN
subclass of: SO_0000673
so part of: ELN
location: join(995656..995734,1001009..1001062,1001433..1001459,1001612..1001644,1002938..1002982,1003451..1003543,1003918..1003977,1004055..1004123,1004208..1004258,1005564..1005635,1005781..1005807,1006013..1006084,1008954..1008995,1009384..1009449,1009732..1009776,1009927..1010028,1010114..1010173,1011085..1011201,1011284..1011334,1012249..1012368,1012454..1012510,1012673..1012819,1012932..1012988,1013634..1013777,1013974..1014027,1014122..1014256,1014351..1014398,1014766..1014807,1015108..1015167,1016006..1016047,1016183..1016212,1016324..1016374,1016471..1016520)
location: region:995656-1016520:1
so has part: feature:995656-995734:1:exon
so has part: feature:1001009-1001062:1:exon
so has part: feature:1001433-1001459:1:exon
so has part: feature:1001612-1001644:1:exon
so has part: feature:1002938-1002982:1:exon
so has part: feature:1003451-1003543:1:exon
so has part: feature:1003918-1003977:1:exon
so has part: feature:1004055-1004123:1:exon
so has part: feature:1004208-1004258:1:exon
so has part: feature:1005564-1005635:1:exon
so has part: feature:1005781-1005807:1:exon
so has part: feature:1006013-1006084:1:exon
so has part: feature:1008954-1008995:1:exon
so has part: feature:1009384-1009449:1:exon
so has part: feature:1009732-1009776:1:exon
so has part: feature:1009927-1010028:1:exon
so has part: feature:1010114-1010173:1:exon
so has part: feature:1011085-1011201:1:exon
so has part: feature:1011284-1011334:1:exon
so has part: feature:1012249-1012368:1:exon
so has part: feature:1012454-1012510:1:exon
so has part: feature:1012673-1012819:1:exon
so has part: feature:1012932-1012988:1:exon
so has part: feature:1013634-1013777:1:exon
so has part: feature:1013974-1014027:1:exon
so has part: feature:1014122-1014256:1:exon
so has part: feature:1014351-1014398:1:exon
so has part: feature:1014766-1014807:1:exon
so has part: feature:1015108-1015167:1:exon
so has part: feature:1016006-1016047:1:exon
so has part: feature:1016183-1016212:1:exon
so has part: feature:1016324-1016374:1:exon
so has part: feature:1016471-1016520:1:exon

XP_032057024.1
type: Protein
SIO_000068: ncbiprotein

position:995656:1
position: 995656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1016520:1
position: 1016520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:995656-995734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1001009-1001062:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1001433-1001459:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1001612-1001644:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1002938-1002982:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1003451-1003543:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1003918-1003977:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1004055-1004123:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1004208-1004258:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1005564-1005635:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1005781-1005807:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1006013-1006084:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1008954-1008995:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1009384-1009449:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1009732-1009776:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1009927-1010028:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1010114-1010173:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1011085-1011201:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1011284-1011334:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1012249-1012368:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1012454-1012510:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1012673-1012819:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1012932-1012988:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1013634-1013777:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1013974-1014027:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1014122-1014256:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1014351-1014398:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1014766-1014807:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1015108-1015167:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1016006-1016047:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1016183-1016212:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1016324-1016374:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1016471-1016520:1:exon

LIMK1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LIMK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1017774..1026320
location: region:1017774-1026320:1
so has part: feature:1017774-1026320:1:exon
subclass of: SO_0000010

116497220
type: Gene
SIO_000068: ncbigene

position:1017774:1
position: 1017774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1026320:1
position: 1026320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1017774-1026320:1:exon

LIMK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LIMK1
product: LIM domain kinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032200861.1
SIO_010081: LIMK1
subclass of: SO_0000673
so part of: LIMK1
location: join(1017774..1017831,1020276..1020372,1021658..1021796,1021930..1022039,1022128..1022334,1022836..1022941,1023021..1023205,1023298..1023481,1023678..1023764,1023998..1024129,1024220..1024279,1024387..1024452,1024554..1024710,1024817..1024872,1024959..1025116,1025233..1026320)
location: region:1017774-1026320:1
so has part: feature:1017774-1017831:1:exon
so has part: feature:1020276-1020372:1:exon
so has part: feature:1021658-1021796:1:exon
so has part: feature:1021930-1022039:1:exon
so has part: feature:1022128-1022334:1:exon
so has part: feature:1022836-1022941:1:exon
so has part: feature:1023021-1023205:1:exon
so has part: feature:1023298-1023481:1:exon
so has part: feature:1023678-1023764:1:exon
so has part: feature:1023998-1024129:1:exon
so has part: feature:1024220-1024279:1:exon
so has part: feature:1024387-1024452:1:exon
so has part: feature:1024554-1024710:1:exon
so has part: feature:1024817-1024872:1:exon
so has part: feature:1024959-1025116:1:exon
so has part: feature:1025233-1026320:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1017774-1017831:1:exon

position:1017831:1
position: 1017831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1020276-1020372:1:exon

position:1020276:1
position: 1020276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1020372:1
position: 1020372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1021658-1021796:1:exon

position:1021658:1
position: 1021658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1021796:1
position: 1021796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1021930-1022039:1:exon

position:1021930:1
position: 1021930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1022039:1
position: 1022039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1022128-1022334:1:exon

position:1022128:1
position: 1022128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1022334:1
position: 1022334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1022836-1022941:1:exon

position:1022836:1
position: 1022836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1022941:1
position: 1022941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1023021-1023205:1:exon

position:1023021:1
position: 1023021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1023205:1
position: 1023205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1023298-1023481:1:exon

position:1023298:1
position: 1023298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1023481:1
position: 1023481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1023678-1023764:1:exon

position:1023678:1
position: 1023678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1023764:1
position: 1023764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1023998-1024129:1:exon

position:1023998:1
position: 1023998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024129:1
position: 1024129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1024220-1024279:1:exon

position:1024220:1
position: 1024220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024279:1
position: 1024279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1024387-1024452:1:exon

position:1024387:1
position: 1024387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024452:1
position: 1024452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1024554-1024710:1:exon

position:1024554:1
position: 1024554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024710:1
position: 1024710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1024817-1024872:1:exon

position:1024817:1
position: 1024817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024872:1
position: 1024872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1024959-1025116:1:exon

position:1024959:1
position: 1024959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1025116:1
position: 1025116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1025233-1026320:1:exon

position:1025233:1
position: 1025233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LIMK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LIMK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain kinase 1
translation: MRLMLLCCTWRDEPMGEEEGTDLPVCASCGQGIYDGQYLQALNADWHADCFRCCECGASLSHQYYEKDGRLYCKKDYWARFGELCHGCAEQITKGLVMVAGEQKYHPECFSCLNCHTFIGDGDTYALVERSKLYCGHCYYQMVVTPVIEQILPDSPGSRIPHTVTLVSIPACSDGKRGFSVSIDQHCGTQGCGAEHSRTVRVREVDPDCISPDVKNSIHVGDRILEINGTPIGHVPLDEIDLLIQETSRLLQLTIEHDPHEPLARESALACSPLPDLRSPLRSPAPTPCGELGAMRQRTVMRSCSTDKSPGSSSVGSPASQRKDIGRSESLRVVSRAHRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKEKRLNFITEYIKGGTLRGLIKSMDSHYPWSQRVSFAKDIAAGMAYLHSMNIIHRDLNSHNCLVRENKSVVVADFGLARLMVDEKNQPEHLKNLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDIFSFGIVLCEIIGRVSADPDYLPRTTDFGLNVRGFLDRYCPPSCPPSFFPIAVCCCDLDPEKRPSFGKLEQWLETLRMHLDIHLPLSSQLEQLTRAFWETHRRGEGGLPPHPELPDRVPHLHPV
SIO_010081: LIMK1
subclass of: SO_0000673
so part of: LIMK1
location: join(1017774..1017831,1020276..1020372,1021658..1021796,1021930..1022039,1022128..1022334,1022836..1022941,1023021..1023205,1023298..1023481,1023678..1023764,1023998..1024129,1024220..1024279,1024387..1024452,1024554..1024710,1024817..1024872,1024959..1025116,1025233..1025419)
location: region:1017774-1025419:1
so has part: feature:1017774-1017831:1:exon
so has part: feature:1020276-1020372:1:exon
so has part: feature:1021658-1021796:1:exon
so has part: feature:1021930-1022039:1:exon
so has part: feature:1022128-1022334:1:exon
so has part: feature:1022836-1022941:1:exon
so has part: feature:1023021-1023205:1:exon
so has part: feature:1023298-1023481:1:exon
so has part: feature:1023678-1023764:1:exon
so has part: feature:1023998-1024129:1:exon
so has part: feature:1024220-1024279:1:exon
so has part: feature:1024387-1024452:1:exon
so has part: feature:1024554-1024710:1:exon
so has part: feature:1024817-1024872:1:exon
so has part: feature:1024959-1025116:1:exon
so has part: feature:1025233-1025419:1:exon

XP_032056752.1
type: Protein
SIO_000068: ncbiprotein

position:1025419:1
position: 1025419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1017774-1017831:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1020276-1020372:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1021658-1021796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1021930-1022039:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1022128-1022334:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1022836-1022941:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1023021-1023205:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1023298-1023481:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1023678-1023764:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1023998-1024129:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1024220-1024279:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1024387-1024452:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1024554-1024710:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1024817-1024872:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1024959-1025116:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1025233-1025419:1:exon

SEPTIN4
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: SEPTIN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1032604..1043898
location: region:1032604-1043898:1
so has part: feature:1032604-1043898:1:exon
subclass of: SO_0000010

116497378
type: Gene
SIO_000068: ncbigene

position:1032604:1
position: 1032604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043898:1
position: 1043898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1032604-1043898:1:exon

SEPTIN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SEPTIN4
product: septin 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032201103.1
SIO_010081: SEPTIN4
subclass of: SO_0000673
so part of: SEPTIN4
location: join(1032604..1032669,1036716..1037009,1037185..1037278,1037352..1037438,1038516..1038639,1038878..1039012,1039109..1039226,1039547..1039648,1039923..1040019,1040283..1040445,1042148..1042247,1042499..1043898)
location: region:1032604-1043898:1
so has part: feature:1032604-1032669:1:exon
so has part: feature:1036716-1037009:1:exon
so has part: feature:1037185-1037278:1:exon
so has part: feature:1037352-1037438:1:exon
so has part: feature:1038516-1038639:1:exon
so has part: feature:1038878-1039012:1:exon
so has part: feature:1039109-1039226:1:exon
so has part: feature:1039547-1039648:1:exon
so has part: feature:1039923-1040019:1:exon
so has part: feature:1040283-1040445:1:exon
so has part: feature:1042148-1042247:1:exon
so has part: feature:1042499-1043898:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1032604-1032669:1:exon

position:1032669:1
position: 1032669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1036716-1037009:1:exon

position:1036716:1
position: 1036716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037009:1
position: 1037009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1037185-1037278:1:exon

position:1037185:1
position: 1037185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037278:1
position: 1037278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1037352-1037438:1:exon

position:1037352:1
position: 1037352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037438:1
position: 1037438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1038516-1038639:1:exon

position:1038516:1
position: 1038516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038639:1
position: 1038639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1038878-1039012:1:exon

position:1038878:1
position: 1038878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039012:1
position: 1039012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1039109-1039226:1:exon

position:1039109:1
position: 1039109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039226:1
position: 1039226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1039547-1039648:1:exon

position:1039547:1
position: 1039547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039648:1
position: 1039648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1039923-1040019:1:exon

position:1039923:1
position: 1039923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040019:1
position: 1040019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1040283-1040445:1:exon

position:1040283:1
position: 1040283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040445:1
position: 1040445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1042148-1042247:1:exon

position:1042148:1
position: 1042148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042247:1
position: 1042247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1042499-1043898:1:exon

position:1042499:1
position: 1042499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SEPTIN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SEPTIN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-4 isoform X2
translation: MIKRFLKEDSEEAELTQFLRDCPPTDTPRKVEPPEGRREPGHPLCGRVPAEEPADDRDVRPFSRPRPLDAQQLITAPPPPSPSRPRSPWGQLDPYDSSEDDKEYVGFATLPNQVHRKSVKKGFDFTLMVAGESGLGKSTLVNSLFLTDMYRDRKFLNAEERITQTVEITKHVVDIEEKGVKLRLTIVDTPGFGDAVNNTECWKPVADYIDQQFEQYFRDESGLNRKNIQDNRVHCCIYFISPFGHGLRPLDVEFMRALHQRVNIVPVLAKADTLTPSEVERMKNKIREEIDHYGIRIYQFPECDSDEDEEFKLQDQALKESIPFAVIGSNTVVEAKGRRVRGRLYPWGIVEVENPSHCDFVKLRTMLVRTHMQDLKDVTRETHYENYRTQCIQSMTRMVVKERNRNKLTRESGTDFPIPVIPPVPDSETEKLIREKDEELRRMQEMLQKIQKQMKDSH
SIO_010081: SEPTIN4
subclass of: SO_0000673
so part of: SEPTIN4
location: join(1032667..1032669,1036716..1037009,1037185..1037278,1037352..1037438,1038516..1038639,1038878..1039012,1039109..1039226,1039547..1039648,1039923..1040019,1040283..1040445,1042148..1042247,1042499..1042558)
location: region:1032667-1042558:1
so has part: feature:1032667-1032669:1:exon
so has part: feature:1036716-1037009:1:exon
so has part: feature:1037185-1037278:1:exon
so has part: feature:1037352-1037438:1:exon
so has part: feature:1038516-1038639:1:exon
so has part: feature:1038878-1039012:1:exon
so has part: feature:1039109-1039226:1:exon
so has part: feature:1039547-1039648:1:exon
so has part: feature:1039923-1040019:1:exon
so has part: feature:1040283-1040445:1:exon
so has part: feature:1042148-1042247:1:exon
so has part: feature:1042499-1042558:1:exon

XP_032056994.1
type: Protein
SIO_000068: ncbiprotein

position:1032667:1
position: 1032667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042558:1
position: 1042558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1032667-1032669:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1036716-1037009:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1037185-1037278:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1037352-1037438:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1038516-1038639:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1038878-1039012:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1039109-1039226:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1039547-1039648:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1039923-1040019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1040283-1040445:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1042148-1042247:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1042499-1042558:1:exon

SEPTIN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SEPTIN4
product: septin 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032201102.1
SIO_010081: SEPTIN4
subclass of: SO_0000673
so part of: SEPTIN4
location: join(1036471..1036489,1036716..1037009,1037185..1037278,1037352..1037438,1038516..1038639,1038878..1039012,1039109..1039226,1039547..1039648,1039923..1040019,1040283..1040445,1042148..1042247,1042499..1043898)
location: region:1036471-1043898:1
so has part: feature:1036471-1036489:1:exon
so has part: feature:1036716-1037009:1:exon
so has part: feature:1037185-1037278:1:exon
so has part: feature:1037352-1037438:1:exon
so has part: feature:1038516-1038639:1:exon
so has part: feature:1038878-1039012:1:exon
so has part: feature:1039109-1039226:1:exon
so has part: feature:1039547-1039648:1:exon
so has part: feature:1039923-1040019:1:exon
so has part: feature:1040283-1040445:1:exon
so has part: feature:1042148-1042247:1:exon
so has part: feature:1042499-1043898:1:exon

position:1036471:1
position: 1036471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1036471-1036489:1:exon

position:1036489:1
position: 1036489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1036716-1037009:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1037185-1037278:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1037352-1037438:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1038516-1038639:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1038878-1039012:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1039109-1039226:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1039547-1039648:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1039923-1040019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1040283-1040445:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1042148-1042247:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1042499-1043898:1:exon

SEPTIN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SEPTIN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-4 isoform X1
translation: MQQAIKRFLKEDSEEAELTQFLRDCPPTDTPRKVEPPEGRREPGHPLCGRVPAEEPADDRDVRPFSRPRPLDAQQLITAPPPPSPSRPRSPWGQLDPYDSSEDDKEYVGFATLPNQVHRKSVKKGFDFTLMVAGESGLGKSTLVNSLFLTDMYRDRKFLNAEERITQTVEITKHVVDIEEKGVKLRLTIVDTPGFGDAVNNTECWKPVADYIDQQFEQYFRDESGLNRKNIQDNRVHCCIYFISPFGHGLRPLDVEFMRALHQRVNIVPVLAKADTLTPSEVERMKNKIREEIDHYGIRIYQFPECDSDEDEEFKLQDQALKESIPFAVIGSNTVVEAKGRRVRGRLYPWGIVEVENPSHCDFVKLRTMLVRTHMQDLKDVTRETHYENYRTQCIQSMTRMVVKERNRNKLTRESGTDFPIPVIPPVPDSETEKLIREKDEELRRMQEMLQKIQKQMKDSH
SIO_010081: SEPTIN4
subclass of: SO_0000673
so part of: SEPTIN4
location: join(1036478..1036489,1036716..1037009,1037185..1037278,1037352..1037438,1038516..1038639,1038878..1039012,1039109..1039226,1039547..1039648,1039923..1040019,1040283..1040445,1042148..1042247,1042499..1042558)
location: region:1036478-1042558:1
so has part: feature:1036478-1036489:1:exon
so has part: feature:1036716-1037009:1:exon
so has part: feature:1037185-1037278:1:exon
so has part: feature:1037352-1037438:1:exon
so has part: feature:1038516-1038639:1:exon
so has part: feature:1038878-1039012:1:exon
so has part: feature:1039109-1039226:1:exon
so has part: feature:1039547-1039648:1:exon
so has part: feature:1039923-1040019:1:exon
so has part: feature:1040283-1040445:1:exon
so has part: feature:1042148-1042247:1:exon
so has part: feature:1042499-1042558:1:exon

XP_032056993.1
type: Protein
SIO_000068: ncbiprotein

position:1036478:1
position: 1036478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1036478-1036489:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1036716-1037009:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1037185-1037278:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1037352-1037438:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1038516-1038639:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1038878-1039012:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1039109-1039226:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1039547-1039648:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1039923-1040019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1040283-1040445:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1042148-1042247:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1042499-1042558:1:exon

CCDC183
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: CCDC183
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1049187..1054263)
location: region:1049187-1054263:-1
so has part: feature:1049187-1054263:-1:exon
subclass of: SO_0000010

116497131
type: Gene
SIO_000068: ncbigene

position:1049187:-1
position: 1049187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1054263:-1
position: 1054263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1049187-1054263:-1:exon

CCDC183
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: CCDC183
product: coiled-coil domain containing 183
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_032200669.1
SIO_010081: CCDC183
subclass of: SO_0000673
so part of: CCDC183
location: complement(join(1049187..1049299,1049955..1050051,1050280..1050405,1050586..1050751,1051257..1051417,1051586..1051686,1051770..1051830,1051947..1052075,1052464..1052586,1052726..1052830,1052905..1053072,1053395..1053472,1053614..1053735,1054197..1054263))
location: region:1049187-1054263:-1
so has part: feature:1054197-1054263:-1:exon
so has part: feature:1053614-1053735:-1:exon
so has part: feature:1053395-1053472:-1:exon
so has part: feature:1052905-1053072:-1:exon
so has part: feature:1052726-1052830:-1:exon
so has part: feature:1052464-1052586:-1:exon
so has part: feature:1051947-1052075:-1:exon
so has part: feature:1051770-1051830:-1:exon
so has part: feature:1051586-1051686:-1:exon
so has part: feature:1051257-1051417:-1:exon
so has part: feature:1050586-1050751:-1:exon
so has part: feature:1050280-1050405:-1:exon
so has part: feature:1049955-1050051:-1:exon
so has part: feature:1049187-1049299:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1054197-1054263:-1:exon

position:1054197:-1
position: 1054197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1053614-1053735:-1:exon

position:1053614:-1
position: 1053614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1053735:-1
position: 1053735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1053395-1053472:-1:exon

position:1053395:-1
position: 1053395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1053472:-1
position: 1053472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1052905-1053072:-1:exon

position:1052905:-1
position: 1052905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1053072:-1
position: 1053072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1052726-1052830:-1:exon

position:1052726:-1
position: 1052726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052830:-1
position: 1052830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1052464-1052586:-1:exon

position:1052464:-1
position: 1052464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052586:-1
position: 1052586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1051947-1052075:-1:exon

position:1051947:-1
position: 1051947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052075:-1
position: 1052075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1051770-1051830:-1:exon

position:1051770:-1
position: 1051770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051830:-1
position: 1051830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1051586-1051686:-1:exon

position:1051586:-1
position: 1051586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051686:-1
position: 1051686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1051257-1051417:-1:exon

position:1051257:-1
position: 1051257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051417:-1
position: 1051417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1050586-1050751:-1:exon

position:1050586:-1
position: 1050586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1050751:-1
position: 1050751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1050280-1050405:-1:exon

position:1050280:-1
position: 1050280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1050405:-1
position: 1050405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1049955-1050051:-1:exon

position:1049955:-1
position: 1049955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1050051:-1
position: 1050051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1049187-1049299:-1:exon

position:1049299:-1
position: 1049299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC183
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: CCDC183
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 183
translation: MQSRRADISQQTQELRNIITLQEQGKKFFTQSSEEKLSQNRDLLPQLRGMVQEDVHALGIAQKREQLIISDACRAQKNLDIVLAGKTVEGAREKLQSSIFERVNACNALLYEVRRRGQTQDELQQRLQQLLDVKIDDKRIQEQVQMIRQLENSIEKMLMKVRTGQKVTLLYLAVKDVLKKELAYLPLHLDLLHGMAGVYHGELEDMELMALDALKANNITKEELAKLEREFLAERELRHRSLAAQKVQIDRLWLKNASEKHLRAQARYDLAMDFPALLPQDSLTGTKLEATKSQIQHEAQVTAEVEKAKAAVQCSRLWDITGRLLAQQKSTAELEQHIGECEEKRQALKAMLKDLELKQAELKFRQPPSAISCRRLETELRTSLQQEEARLEQARAQSLRNQELLLLFENGIDNLFIRLYGIDVPEQDVSVELKGVDEKLQYCEQKLQHLVQRVASLPAPSYSPDEDNEIFVKVRNFLEKTTAREPQNLKISLEDIGSAVQDPFDFADKDDGLVLTREDIKKQGLHLIESKMKSGKRK
SIO_010081: CCDC183
subclass of: SO_0000673
so part of: CCDC183
location: complement(join(1049187..1049299,1049955..1050051,1050280..1050405,1050586..1050751,1051257..1051417,1051586..1051686,1051770..1051830,1051947..1052075,1052464..1052586,1052726..1052830,1052905..1053072,1053395..1053472,1053614..1053735,1054197..1054263))
location: region:1049187-1054263:-1
so has part: feature:1054197-1054263:-1:exon
so has part: feature:1053614-1053735:-1:exon
so has part: feature:1053395-1053472:-1:exon
so has part: feature:1052905-1053072:-1:exon
so has part: feature:1052726-1052830:-1:exon
so has part: feature:1052464-1052586:-1:exon
so has part: feature:1051947-1052075:-1:exon
so has part: feature:1051770-1051830:-1:exon
so has part: feature:1051586-1051686:-1:exon
so has part: feature:1051257-1051417:-1:exon
so has part: feature:1050586-1050751:-1:exon
so has part: feature:1050280-1050405:-1:exon
so has part: feature:1049955-1050051:-1:exon
so has part: feature:1049187-1049299:-1:exon

XP_032056560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1054197-1054263:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1053614-1053735:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1053395-1053472:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1052905-1053072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1052726-1052830:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1052464-1052586:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1051947-1052075:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1051770-1051830:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1051586-1051686:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1051257-1051417:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1050586-1050751:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1050280-1050405:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1049955-1050051:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1049187-1049299:-1:exon

SBDS
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: SBDS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1055285..1060461)
location: region:1055285-1060461:-1
so has part: feature:1055285-1060461:-1:exon
subclass of: SO_0000010

116497265
type: Gene
SIO_000068: ncbigene

position:1055285:-1
position: 1055285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1060461:-1
position: 1060461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1055285-1060461:-1:exon

SBDS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SBDS
product: SBDS ribosome maturation factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032200938.1
SIO_010081: SBDS
subclass of: SO_0000673
so part of: SBDS
location: complement(join(1055285..1057704,1058333..1058497,1059093..1059293,1059935..1060064,1060283..1060461))
location: region:1055285-1060461:-1
so has part: feature:1060283-1060461:-1:exon
so has part: feature:1059935-1060064:-1:exon
so has part: feature:1059093-1059293:-1:exon
so has part: feature:1058333-1058497:-1:exon
so has part: feature:1055285-1057704:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1060283-1060461:-1:exon

position:1060283:-1
position: 1060283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1059935-1060064:-1:exon

position:1059935:-1
position: 1059935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1060064:-1
position: 1060064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1059093-1059293:-1:exon

position:1059093:-1
position: 1059093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1059293:-1
position: 1059293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1058333-1058497:-1:exon

position:1058333:-1
position: 1058333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1058497:-1
position: 1058497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1055285-1057704:-1:exon

position:1057704:-1
position: 1057704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SBDS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SBDS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosome maturation protein SBDS
translation: MSIFTPTNQIRLTNVAVVRARRGGKRFEIACYRNKVMGWRSGAEKDLDEVLQTHTVFVNVSKGQVAKKEDLVRAFGTDDQTEICKMILSKGELQVSDKERQTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIRQLKETMQIERAHMRLRFILPAKEGKKLKEKLKPLIKVIENEDFHDQLEIVCLIDPGCFREIDELIRCETKGKGTLEVLSLKDVEEGDEKLE
SIO_010081: SBDS
subclass of: SO_0000673
so part of: SBDS
location: complement(join(1057576..1057704,1058333..1058497,1059093..1059293,1059935..1060064,1060283..1060410))
location: region:1057576-1060410:-1
so has part: feature:1060283-1060410:-1:exon
so has part: feature:1059935-1060064:-1:exon
so has part: feature:1059093-1059293:-1:exon
so has part: feature:1058333-1058497:-1:exon
so has part: feature:1057576-1057704:-1:exon

XP_032056829.1
type: Protein
SIO_000068: ncbiprotein

position:1057576:-1
position: 1057576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1060410:-1
position: 1060410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1060283-1060410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1059935-1060064:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1059093-1059293:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1058333-1058497:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1057576-1057704:-1:exon

LOC116497463
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116497463
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1060557..1164613
location: region:1060557-1164613:1
so has part: feature:1060557-1164613:1:exon
subclass of: SO_0000010

116497463
type: Gene
SIO_000068: ncbigene

position:1060557:1
position: 1060557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164613:1
position: 1164613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1060557-1164613:1:exon

LOC116497463
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116497463
product: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032201212.1
SIO_010081: LOC116497463
subclass of: SO_0000673
so part of: LOC116497463
location: join(1060557..1060588,1062030..1062172,1062886..1063023,1063605..1063706,1064496..1064690,1065571..1065852,1068251..1068370,1080755..1080881,1092145..1092197,1094837..1094955,1105490..1105599,1112327..1112504,1116345..1116480,1138203..1138313,1151305..1151472,1163510..1164613)
location: region:1060557-1164613:1
so has part: feature:1060557-1060588:1:exon
so has part: feature:1062030-1062172:1:exon
so has part: feature:1062886-1063023:1:exon
so has part: feature:1063605-1063706:1:exon
so has part: feature:1064496-1064690:1:exon
so has part: feature:1065571-1065852:1:exon
so has part: feature:1068251-1068370:1:exon
so has part: feature:1080755-1080881:1:exon
so has part: feature:1092145-1092197:1:exon
so has part: feature:1094837-1094955:1:exon
so has part: feature:1105490-1105599:1:exon
so has part: feature:1112327-1112504:1:exon
so has part: feature:1116345-1116480:1:exon
so has part: feature:1138203-1138313:1:exon
so has part: feature:1151305-1151472:1:exon
so has part: feature:1163510-1164613:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1060557-1060588:1:exon

position:1060588:1
position: 1060588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1062030-1062172:1:exon

position:1062030:1
position: 1062030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1062172:1
position: 1062172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1062886-1063023:1:exon

position:1062886:1
position: 1062886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1063023:1
position: 1063023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1063605-1063706:1:exon

position:1063605:1
position: 1063605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1063706:1
position: 1063706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1064496-1064690:1:exon

position:1064496:1
position: 1064496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064690:1
position: 1064690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1065571-1065852:1:exon

position:1065571:1
position: 1065571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1065852:1
position: 1065852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1068251-1068370:1:exon

position:1068251:1
position: 1068251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1068370:1
position: 1068370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1080755-1080881:1:exon

position:1080755:1
position: 1080755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1080881:1
position: 1080881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1092145-1092197:1:exon

position:1092145:1
position: 1092145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1092197:1
position: 1092197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1094837-1094955:1:exon

position:1094837:1
position: 1094837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1094955:1
position: 1094955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1105490-1105599:1:exon

position:1105490:1
position: 1105490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1105599:1
position: 1105599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1112327-1112504:1:exon

position:1112327:1
position: 1112327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1112504:1
position: 1112504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1116345-1116480:1:exon

position:1116345:1
position: 1116345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1116480:1
position: 1116480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1138203-1138313:1:exon

position:1138203:1
position: 1138203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1138313:1
position: 1138313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1151305-1151472:1:exon

position:1151305:1
position: 1151305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1151472:1
position: 1151472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1163510-1164613:1:exon

position:1163510:1
position: 1163510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116497463
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116497463
product: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032201213.1
SIO_010081: LOC116497463
subclass of: SO_0000673
so part of: LOC116497463
location: join(1061721..1061781,1062030..1062172,1062886..1063023,1063605..1063706,1064496..1064690,1065571..1065852,1068251..1068370,1080755..1080881,1092145..1092197,1094837..1094955,1105490..1105599,1112327..1112504,1116345..1116480,1138203..1138313,1151305..1151472,1163510..1164613)
location: region:1061721-1164613:1
so has part: feature:1061721-1061781:1:exon
so has part: feature:1062030-1062172:1:exon
so has part: feature:1062886-1063023:1:exon
so has part: feature:1063605-1063706:1:exon
so has part: feature:1064496-1064690:1:exon
so has part: feature:1065571-1065852:1:exon
so has part: feature:1068251-1068370:1:exon
so has part: feature:1080755-1080881:1:exon
so has part: feature:1092145-1092197:1:exon
so has part: feature:1094837-1094955:1:exon
so has part: feature:1105490-1105599:1:exon
so has part: feature:1112327-1112504:1:exon
so has part: feature:1116345-1116480:1:exon
so has part: feature:1138203-1138313:1:exon
so has part: feature:1151305-1151472:1:exon
so has part: feature:1163510-1164613:1:exon

position:1061721:1
position: 1061721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1061721-1061781:1:exon

position:1061781:1
position: 1061781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1062030-1062172:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1062886-1063023:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1063605-1063706:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1064496-1064690:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1065571-1065852:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1068251-1068370:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1080755-1080881:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1092145-1092197:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1094837-1094955:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1105490-1105599:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1112327-1112504:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1116345-1116480:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1138203-1138313:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1151305-1151472:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1163510-1164613:1:exon

LOC116497463
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116497463
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like
translation: MDMWNFSYTCLASLWLHRFYIYSVIAFGISLWIVVQLFTTKKKGEKSNGNLSSEVVEEKQANGYAAQQAKEVYVAGVKIFYGSQTGTARRFAKGLAEAVISLNLPVEVISMGDYDPDDCLAEETTSRNICVFLVATYTDGQPTESAAWFCKWLEETANDFRFGKTYLKGLRYAVFGLGNSVYVDHYNTVGRNIDRWLWMLSASRIMTRAEGDCNVAQSKHGSIEADFEAWKTKFLSCLQALCRGERKPCSGKCKKGKCKSQGKQSKESSDHEHGASDYENAEAELVETTSEEEADAEEVGGTNSVIDVEDLGNVMSHMKKAKRERELEEGHVGTSLSGETAGRKEAGEKREMITAALRDALTKQGYKLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGTEWRWKMDQPEMILQEAIENHQNMIKQFKGVTGVKADRFEEAMTAKHCALSLVGEPIMYPEINRFLKLLHQHNISSFLVTNAQFPDEIRNLEPVTQLYVSVDASTKESLKRIDRPLFKDFWQRFLDSLKALSEKQQRTVYRLTLVKAWNVDELRAYADLVSLGKPDFIEVKGVTYCGESSASSLTMANVPWHEEVVRFVQELVELIPDYEIACEHEHSNCLLIAHKKFKVDGEWCTWINYERFQELVREHERSGGSKTFTAVDYTARTPRWALFGSSQRGFDPLDVRYQRKSKAKDISGC
SIO_010081: LOC116497463
subclass of: SO_0000673
so part of: LOC116497463
location: join(1062044..1062172,1062886..1063023,1063605..1063706,1064496..1064690,1065571..1065852,1068251..1068370,1080755..1080881,1092145..1092197,1094837..1094955,1105490..1105599,1112327..1112504,1116345..1116480,1138203..1138313,1151305..1151472,1163510..1163731)
location: region:1062044-1163731:1
so has part: feature:1062044-1062172:1:exon
so has part: feature:1062886-1063023:1:exon
so has part: feature:1063605-1063706:1:exon
so has part: feature:1064496-1064690:1:exon
so has part: feature:1065571-1065852:1:exon
so has part: feature:1068251-1068370:1:exon
so has part: feature:1080755-1080881:1:exon
so has part: feature:1092145-1092197:1:exon
so has part: feature:1094837-1094955:1:exon
so has part: feature:1105490-1105599:1:exon
so has part: feature:1112327-1112504:1:exon
so has part: feature:1116345-1116480:1:exon
so has part: feature:1138203-1138313:1:exon
so has part: feature:1151305-1151472:1:exon
so has part: feature:1163510-1163731:1:exon

XP_032057103.1
type: Protein
SIO_000068: ncbiprotein

position:1062044:1
position: 1062044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1163731:1
position: 1163731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1062044-1062172:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1062886-1063023:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1063605-1063706:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1064496-1064690:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1065571-1065852:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1068251-1068370:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1080755-1080881:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1092145-1092197:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1094837-1094955:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1105490-1105599:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1112327-1112504:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1116345-1116480:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1138203-1138313:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1151305-1151472:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1163510-1163731:1:exon

LOC116497463
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116497463
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like
translation: MDMWNFSYTCLASLWLHRFYIYSVIAFGISLWIVVQLFTTKKKGEKSNGNLSSEVVEEKQANGYAAQQAKEVYVAGVKIFYGSQTGTARRFAKGLAEAVISLNLPVEVISMGDYDPDDCLAEETTSRNICVFLVATYTDGQPTESAAWFCKWLEETANDFRFGKTYLKGLRYAVFGLGNSVYVDHYNTVGRNIDRWLWMLSASRIMTRAEGDCNVAQSKHGSIEADFEAWKTKFLSCLQALCRGERKPCSGKCKKGKCKSQGKQSKESSDHEHGASDYENAEAELVETTSEEEADAEEVGGTNSVIDVEDLGNVMSHMKKAKRERELEEGHVGTSLSGETAGRKEAGEKREMITAALRDALTKQGYKLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGTEWRWKMDQPEMILQEAIENHQNMIKQFKGVTGVKADRFEEAMTAKHCALSLVGEPIMYPEINRFLKLLHQHNISSFLVTNAQFPDEIRNLEPVTQLYVSVDASTKESLKRIDRPLFKDFWQRFLDSLKALSEKQQRTVYRLTLVKAWNVDELRAYADLVSLGKPDFIEVKGVTYCGESSASSLTMANVPWHEEVVRFVQELVELIPDYEIACEHEHSNCLLIAHKKFKVDGEWCTWINYERFQELVREHERSGGSKTFTAVDYTARTPRWALFGSSQRGFDPLDVRYQRKSKAKDISGC
SIO_010081: LOC116497463
subclass of: SO_0000673
so part of: LOC116497463
location: join(1062044..1062172,1062886..1063023,1063605..1063706,1064496..1064690,1065571..1065852,1068251..1068370,1080755..1080881,1092145..1092197,1094837..1094955,1105490..1105599,1112327..1112504,1116345..1116480,1138203..1138313,1151305..1151472,1163510..1163731)
location: region:1062044-1163731:1
so has part: feature:1062044-1062172:1:exon
so has part: feature:1062886-1063023:1:exon
so has part: feature:1063605-1063706:1:exon
so has part: feature:1064496-1064690:1:exon
so has part: feature:1065571-1065852:1:exon
so has part: feature:1068251-1068370:1:exon
so has part: feature:1080755-1080881:1:exon
so has part: feature:1092145-1092197:1:exon
so has part: feature:1094837-1094955:1:exon
so has part: feature:1105490-1105599:1:exon
so has part: feature:1112327-1112504:1:exon
so has part: feature:1116345-1116480:1:exon
so has part: feature:1138203-1138313:1:exon
so has part: feature:1151305-1151472:1:exon
so has part: feature:1163510-1163731:1:exon

XP_032057104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1062044-1062172:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1062886-1063023:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1063605-1063706:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1064496-1064690:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1065571-1065852:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1068251-1068370:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1080755-1080881:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1092145-1092197:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1094837-1094955:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1105490-1105599:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1112327-1112504:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1116345-1116480:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1138203-1138313:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1151305-1151472:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1163510-1163731:1:exon

CALN1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: CALN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1227488..1352537
location: region:1227488-1352537:1
so has part: feature:1227488-1352537:1:exon
subclass of: SO_0000010

116497299
type: Gene
SIO_000068: ncbigene

position:1227488:1
position: 1227488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1352537:1
position: 1352537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1227488-1352537:1:exon

CALN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: CALN1
product: calneuron 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032200984.1
SIO_010081: CALN1
subclass of: SO_0000673
so part of: CALN1
location: join(1227488..1227519,1242083..1242207,1281321..1281464,1298898..1299010,1346342..1346495,1351945..1351947,1352038..1352537)
location: region:1227488-1352537:1
so has part: feature:1227488-1227519:1:exon
so has part: feature:1242083-1242207:1:exon
so has part: feature:1281321-1281464:1:exon
so has part: feature:1298898-1299010:1:exon
so has part: feature:1346342-1346495:1:exon
so has part: feature:1351945-1351947:1:exon
so has part: feature:1352038-1352537:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1227488-1227519:1:exon

position:1227519:1
position: 1227519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1242083-1242207:1:exon

position:1242083:1
position: 1242083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1242207:1
position: 1242207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1281321-1281464:1:exon

position:1281321:1
position: 1281321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1281464:1
position: 1281464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1298898-1299010:1:exon

position:1298898:1
position: 1298898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299010:1
position: 1299010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1346342-1346495:1:exon

position:1346342:1
position: 1346342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1346495:1
position: 1346495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1351945-1351947:1:exon

position:1351945:1
position: 1351945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1351947:1
position: 1351947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1352038-1352537:1:exon

position:1352038:1
position: 1352038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CALN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: CALN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding protein 8
translation: MPFHHVTAGLLYKGNYLNRSLSAGSDSEQLANISVEELDEIREAFRVLDRDGNGFISKQELGMAMRSLGYMPSEVELAIIMQRLDMDGDGQVDFDEFMTILGPKLVSSEGRDGFLGNTIDSIFWQFDMQRITLEELKHILYHAFRDHLTMKDIENIIINEEESLNENSGNCQTEFEGVHAQKQNRQTCVRKSLICAFAMAFIISVMLIAANQILRSGME
SIO_010081: CALN1
subclass of: SO_0000673
so part of: CALN1
location: join(1242090..1242207,1281321..1281464,1298898..1299010,1346342..1346495,1351945..1351947,1352038..1352165)
location: region:1242090-1352165:1
so has part: feature:1242090-1242207:1:exon
so has part: feature:1281321-1281464:1:exon
so has part: feature:1298898-1299010:1:exon
so has part: feature:1346342-1346495:1:exon
so has part: feature:1351945-1351947:1:exon
so has part: feature:1352038-1352165:1:exon

XP_032056875.1
type: Protein
SIO_000068: ncbiprotein

position:1242090:1
position: 1242090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1352165:1
position: 1352165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1242090-1242207:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1281321-1281464:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1298898-1299010:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1346342-1346495:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1351945-1351947:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1352038-1352165:1:exon

GALNT17
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: GALNT17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1387759..1600059)
location: region:1387759-1600059:-1
so has part: feature:1387759-1600059:-1:exon
subclass of: SO_0000010

116497158
type: Gene
SIO_000068: ncbigene

position:1387759:-1
position: 1387759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1600059:-1
position: 1600059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1387759-1600059:-1:exon

GALNT17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: GALNT17
product: polypeptide N-acetylgalactosaminyltransferase 17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032200736.1
SIO_010081: GALNT17
subclass of: SO_0000673
so part of: GALNT17
location: complement(join(1387759..1391069,1391724..1391891,1401427..1401522,1402708..1402845,1406152..1406337,1464680..1464797,1509285..1509482,1511605..1511779,1520289..1520455,1542017..1542200,1599692..1600059))
location: region:1387759-1600059:-1
so has part: feature:1599692-1600059:-1:exon
so has part: feature:1542017-1542200:-1:exon
so has part: feature:1520289-1520455:-1:exon
so has part: feature:1511605-1511779:-1:exon
so has part: feature:1509285-1509482:-1:exon
so has part: feature:1464680-1464797:-1:exon
so has part: feature:1406152-1406337:-1:exon
so has part: feature:1402708-1402845:-1:exon
so has part: feature:1401427-1401522:-1:exon
so has part: feature:1391724-1391891:-1:exon
so has part: feature:1387759-1391069:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1599692-1600059:-1:exon

position:1599692:-1
position: 1599692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1542017-1542200:-1:exon

position:1542017:-1
position: 1542017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1542200:-1
position: 1542200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1520289-1520455:-1:exon

position:1520289:-1
position: 1520289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1520455:-1
position: 1520455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1511605-1511779:-1:exon

position:1511605:-1
position: 1511605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1511779:-1
position: 1511779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1509285-1509482:-1:exon

position:1509285:-1
position: 1509285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1509482:-1
position: 1509482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1464680-1464797:-1:exon

position:1464680:-1
position: 1464680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1464797:-1
position: 1464797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1406152-1406337:-1:exon

position:1406152:-1
position: 1406152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1406337:-1
position: 1406337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1402708-1402845:-1:exon

position:1402708:-1
position: 1402708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1402845:-1
position: 1402845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1401427-1401522:-1:exon

position:1401427:-1
position: 1401427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1401522:-1
position: 1401522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1391724-1391891:-1:exon

position:1391724:-1
position: 1391724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1391891:-1
position: 1391891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1387759-1391069:-1:exon

position:1391069:-1
position: 1391069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GALNT17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: GALNT17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polypeptide N-acetylgalactosaminyltransferase 17
translation: MASLRRVKVLLVLNLIAVAGFVLFLAKCRPITAKSGDSFHDVHPRAEVVNLTAHGIGSIQDAVLKRLSLLEDIVYRQLNGLSKSLGLIEGYGGRGKGGLPATLSPEEEEKAKGPHEKYGYNSYLSEKISLDRSIPDYRPTKCKELKYGKDLPQISIIFIFVNEALSVILRSVHSAVNHTPAHLLKEIILVDDNSDEEELKAPLEEYVNKRYPGLVKVVRNQKREGLIRARIEGWKAATGQVTGFFDAHVEFTAGWAEPVLSRIQENRRRVILPSIDNIKQDNFEVQRYENSAHGYSWELWCMYISPPKDWWDAGDPSLPIRTPAMIGCSFVVHRKFFGEIGLLDPGMDVYGGENIELGIKVWLCGGSMEVLPCSRVAHIERKKKPYNNNIGFYTKRNALRVAEVWMDDYKSHVYIAWNLPLENPGIDIGDVSERKALRKSLKCKNFQWYLDHVYPEMRRYNNTVAYGELRNNKAKDVCLDQGPQENHTAILYPCHGWGPQLARYTKEGFLHLGALGTTTLLPDTRCLVDNVKSRFPQLLDCEKVKSSLHKRWNFIQNGAILNKGTGRCLEVENRGMAGIDLILRSCTGQRWTIKNFIK
SIO_010081: GALNT17
subclass of: SO_0000673
so part of: GALNT17
location: complement(join(1390941..1391069,1391724..1391891,1401427..1401522,1402708..1402845,1406152..1406337,1464680..1464797,1509285..1509482,1511605..1511779,1520289..1520455,1542017..1542200,1599692..1599929))
location: region:1390941-1599929:-1
so has part: feature:1599692-1599929:-1:exon
so has part: feature:1542017-1542200:-1:exon
so has part: feature:1520289-1520455:-1:exon
so has part: feature:1511605-1511779:-1:exon
so has part: feature:1509285-1509482:-1:exon
so has part: feature:1464680-1464797:-1:exon
so has part: feature:1406152-1406337:-1:exon
so has part: feature:1402708-1402845:-1:exon
so has part: feature:1401427-1401522:-1:exon
so has part: feature:1391724-1391891:-1:exon
so has part: feature:1390941-1391069:-1:exon

XP_032056627.1
type: Protein
SIO_000068: ncbiprotein

position:1390941:-1
position: 1390941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1599929:-1
position: 1599929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1599692-1599929:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1542017-1542200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1520289-1520455:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1511605-1511779:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1509285-1509482:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1464680-1464797:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1406152-1406337:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1402708-1402845:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1401427-1401522:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1391724-1391891:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1390941-1391069:-1:exon

LOC116497231
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116497231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1610558..1611621)
location: region:1610558-1611621:-1
so has part: feature:1610558-1611621:-1:exon
subclass of: SO_0000010

116497231
type: Gene
SIO_000068: ncbigene

position:1610558:-1
position: 1610558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1611621:-1
position: 1611621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1610558-1611621:-1:exon

LOC116497231
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116497231
product: protein SEC13 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032200889.1
SIO_010081: LOC116497231
subclass of: SO_0000673
so part of: LOC116497231
location: complement(1610558..1611621)
location: region:1610558-1611621:-1
so has part: feature:1610558-1611621:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1610558-1611621:-1:exon

LOC116497231
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116497231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SEC13 homolog
translation: MVSVINTVDTSHKDMIHEAQMDYYGTRLATCSSDRSVKIFDVWNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLSYTGDGQWEVKKISNAHTIGCNAVSWAPAVVPGSLIEQPSGQKPNYIKRFASGGCDNLVKIWKEEDGQWKEEQKLEAHSGWVQDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNSWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWK
SIO_010081: LOC116497231
subclass of: SO_0000673
so part of: LOC116497231
location: complement(1610735..1611604)
location: region:1610735-1611604:-1
so has part: feature:1610735-1611604:-1:exon

XP_032056780.1
type: Protein
SIO_000068: ncbiprotein

position:1610735:-1
position: 1610735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1611604:-1
position: 1611604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1610735-1611604:-1:exon

AUTS2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: AUTS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1682186..2442923)
location: region:1682186-2442923:-1
so has part: feature:1682186-2442923:-1:exon
subclass of: SO_0000010

116497152
type: Gene
SIO_000068: ncbigene

position:1682186:-1
position: 1682186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2442923:-1
position: 2442923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1682186-2442923:-1:exon

AUTS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: AUTS2
product: activator of transcription and developmental regulator AUTS2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032200715.1
SIO_010081: AUTS2
subclass of: SO_0000673
so part of: AUTS2
location: complement(join(1682186..1685370,1690358..1690580,1691493..1691576,1693367..1693444,1693966..1694107,1698000..1698071,1699527..1699556,1701277..1701348,1702653..1702748,1706749..1706793,1707261..1707481,1708438..1708691,1710252..1710729,1755165..1755213,1917975..1918004,2100226..2100261,2108197..2108298,2246775..2246984,2442630..2442923))
location: region:1682186-2442923:-1
so has part: feature:2442630-2442923:-1:exon
so has part: feature:2246775-2246984:-1:exon
so has part: feature:2108197-2108298:-1:exon
so has part: feature:2100226-2100261:-1:exon
so has part: feature:1917975-1918004:-1:exon
so has part: feature:1755165-1755213:-1:exon
so has part: feature:1710252-1710729:-1:exon
so has part: feature:1708438-1708691:-1:exon
so has part: feature:1707261-1707481:-1:exon
so has part: feature:1706749-1706793:-1:exon
so has part: feature:1702653-1702748:-1:exon
so has part: feature:1701277-1701348:-1:exon
so has part: feature:1699527-1699556:-1:exon
so has part: feature:1698000-1698071:-1:exon
so has part: feature:1693966-1694107:-1:exon
so has part: feature:1693367-1693444:-1:exon
so has part: feature:1691493-1691576:-1:exon
so has part: feature:1690358-1690580:-1:exon
so has part: feature:1682186-1685370:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2442630-2442923:-1:exon

position:2442630:-1
position: 2442630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2246775-2246984:-1:exon

position:2246775:-1
position: 2246775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2246984:-1
position: 2246984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2108197-2108298:-1:exon

position:2108197:-1
position: 2108197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2108298:-1
position: 2108298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2100226-2100261:-1:exon

position:2100226:-1
position: 2100226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2100261:-1
position: 2100261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1917975-1918004:-1:exon

position:1917975:-1
position: 1917975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1918004:-1
position: 1918004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1755165-1755213:-1:exon

position:1755165:-1
position: 1755165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1755213:-1
position: 1755213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1710252-1710729:-1:exon

position:1710252:-1
position: 1710252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1710729:-1
position: 1710729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1708438-1708691:-1:exon

position:1708438:-1
position: 1708438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1708691:-1
position: 1708691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1707261-1707481:-1:exon

position:1707261:-1
position: 1707261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1707481:-1
position: 1707481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1706749-1706793:-1:exon

position:1706749:-1
position: 1706749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1706793:-1
position: 1706793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1702653-1702748:-1:exon

position:1702653:-1
position: 1702653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1702748:-1
position: 1702748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1701277-1701348:-1:exon

position:1701277:-1
position: 1701277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1701348:-1
position: 1701348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1699527-1699556:-1:exon

position:1699527:-1
position: 1699527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1699556:-1
position: 1699556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1698000-1698071:-1:exon

position:1698000:-1
position: 1698000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1698071:-1
position: 1698071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1693966-1694107:-1:exon

position:1693966:-1
position: 1693966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1694107:-1
position: 1694107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1693367-1693444:-1:exon

position:1693367:-1
position: 1693367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1693444:-1
position: 1693444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1691493-1691576:-1:exon

position:1691493:-1
position: 1691493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1691576:-1
position: 1691576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1690358-1690580:-1:exon

position:1690358:-1
position: 1690358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1690580:-1
position: 1690580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1682186-1685370:-1:exon

position:1685370:-1
position: 1685370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AUTS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: AUTS2
product: activator of transcription and developmental regulator AUTS2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032200714.1
SIO_010081: AUTS2
subclass of: SO_0000673
so part of: AUTS2
location: complement(join(1682186..1685370,1690358..1690580,1691493..1691576,1693367..1693444,1693966..1694107,1698000..1698071,1699527..1699556,1701277..1701348,1702653..1702748,1706749..1706793,1707240..1707481,1708438..1708691,1710252..1710729,1755165..1755213,1917975..1918004,2100226..2100261,2108197..2108298,2246775..2246984,2442630..2442923))
location: region:1682186-2442923:-1
so has part: feature:2442630-2442923:-1:exon
so has part: feature:2246775-2246984:-1:exon
so has part: feature:2108197-2108298:-1:exon
so has part: feature:2100226-2100261:-1:exon
so has part: feature:1917975-1918004:-1:exon
so has part: feature:1755165-1755213:-1:exon
so has part: feature:1710252-1710729:-1:exon
so has part: feature:1708438-1708691:-1:exon
so has part: feature:1707240-1707481:-1:exon
so has part: feature:1706749-1706793:-1:exon
so has part: feature:1702653-1702748:-1:exon
so has part: feature:1701277-1701348:-1:exon
so has part: feature:1699527-1699556:-1:exon
so has part: feature:1698000-1698071:-1:exon
so has part: feature:1693966-1694107:-1:exon
so has part: feature:1693367-1693444:-1:exon
so has part: feature:1691493-1691576:-1:exon
so has part: feature:1690358-1690580:-1:exon
so has part: feature:1682186-1685370:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2442630-2442923:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2246775-2246984:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2108197-2108298:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2100226-2100261:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1917975-1918004:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1755165-1755213:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1710252-1710729:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1708438-1708691:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1707240-1707481:-1:exon

position:1707240:-1
position: 1707240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1706749-1706793:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1702653-1702748:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1701277-1701348:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1699527-1699556:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1698000-1698071:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1693966-1694107:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1693367-1693444:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1691493-1691576:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1690358-1690580:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1682186-1685370:-1:exon

AUTS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: AUTS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autism susceptibility gene 2 protein isoform X2
translation: MDGPARCNGLRKKRRSRSQRDRERRAKGGRRGAASGGAAGPGAAAALSSSGSEKEDNGPPAPSRPRPPRRKRRESSSAEEDIIDGFAMASFVTLEALEKDVALKPQERVEKRQNPLAKKKREALTNGLAYLPKKNRLHHHQYSSDRENDRNLCQHLGKRKKLPKGLRQLKPGQNSCRDSDSESASGESKGFHRSSSRERLSDSSAPSSLGTGYFCDSDSDQEEKASDASSEKLFNAVTNKDKELGVSALAENADPGARGPAVPKISGLERSQEKSQDSSKDPILEPVVPKDPCPQAAQPLAQPQLEPQPEAPCPSPVLAPRPEAPAPPAPPPAAQPPPAPEEATRQPAPQPPIQHPPRPQSPVQPAHPNLPPVQPHPAAQSLSQPLSAYNSSSLSLNSLSSSRSSTPAKTQAPPPHISHHPSASPFPLSLPSHSPLHTFTPTLQPPAHPHHPNMFAPPTALPPPPPLTSGTLQVPGHPAGSTYSEQDLLRQELNTRFLASQSADRGASLGPPPYLRTEFHQHQHQHQHTHQHTHQHTFTPFPHAIPPTAIMPTPAPPMFDKYPTKVDPFYRHSLFHSYPPAVSGIPPMIPPTGPFGSLQGAFQPKTSNPIDVAARPGTVPHTLLQKDPRLTDPFRPMLRKPGKWCAMHVHIAWQIYHHQQKVKKQMQSDPHKLDFGLKPEFLSRPPGPSLFGAIHHPHDLARPSTLFSTASGAHPAGTPFGPPPHHSNFLNPAAHLEPFNRPASFSGLTAVGSNAFGGLGNPTVTPNSMFGHKDGPSMQSFSNPHEPWNRLHRTPPSFPTPPPWLKPGELERSSSAAAHDRDRDVDKRDSSVSKDDKERESIEKRHSSHPSPAPIHPVNSLGHNRSSNEQIRSHLNPEVREKEKPKERERDHSESRKEINVEEHKVKDNYISEKEGLSHESRVVEESKQMSRVPSPYARPPVVESTRPNSTSNRETERKNEPAYDNPKKSNEVKVKEERKEDHDVQPEGPQTHRSSDQPPPISTSNVHPSPLVSMPMTVGVTGIHHMNSISGLDRTRMMTPFMGISPIPGGERFPYPSFHWDPMRDPLRDPYRELDIHRRDPLGRDFLLRNDPLHRLSTPRLYEADRSFRDREPHDYNHHHHHHHPLSVDPRREHERGNHLDDRERLHMLREDYEHARLHSVHPATLDGHLPHPSLITPGLPSMHYPRVSPPTGHQNGILNKTPPTAALSAPPPLISTLGPRPGSPRRTTPLSTEMRERPPSHTLKDIEAR
SIO_010081: AUTS2
subclass of: SO_0000673
so part of: AUTS2
location: complement(join(1684131..1685370,1690358..1690580,1691493..1691576,1693367..1693444,1693966..1694107,1698000..1698071,1699527..1699556,1701277..1701348,1702653..1702748,1706749..1706793,1707261..1707481,1708438..1708691,1710252..1710729,1755165..1755213,1917975..1918004,2100226..2100261,2108197..2108298,2246775..2246984,2442630..2442923))
location: region:1684131-2442923:-1
so has part: feature:2442630-2442923:-1:exon
so has part: feature:2246775-2246984:-1:exon
so has part: feature:2108197-2108298:-1:exon
so has part: feature:2100226-2100261:-1:exon
so has part: feature:1917975-1918004:-1:exon
so has part: feature:1755165-1755213:-1:exon
so has part: feature:1710252-1710729:-1:exon
so has part: feature:1708438-1708691:-1:exon
so has part: feature:1707261-1707481:-1:exon
so has part: feature:1706749-1706793:-1:exon
so has part: feature:1702653-1702748:-1:exon
so has part: feature:1701277-1701348:-1:exon
so has part: feature:1699527-1699556:-1:exon
so has part: feature:1698000-1698071:-1:exon
so has part: feature:1693966-1694107:-1:exon
so has part: feature:1693367-1693444:-1:exon
so has part: feature:1691493-1691576:-1:exon
so has part: feature:1690358-1690580:-1:exon
so has part: feature:1684131-1685370:-1:exon

XP_032056606.1
type: Protein
SIO_000068: ncbiprotein

position:1684131:-1
position: 1684131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2442630-2442923:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2246775-2246984:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2108197-2108298:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2100226-2100261:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1917975-1918004:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1755165-1755213:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1710252-1710729:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1708438-1708691:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1707261-1707481:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1706749-1706793:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1702653-1702748:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1701277-1701348:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1699527-1699556:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1698000-1698071:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1693966-1694107:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1693367-1693444:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1691493-1691576:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1690358-1690580:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1684131-1685370:-1:exon

AUTS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: AUTS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autism susceptibility gene 2 protein isoform X1
translation: MDGPARCNGLRKKRRSRSQRDRERRAKGGRRGAASGGAAGPGAAAALSSSGSEKEDNGPPAPSRPRPPRRKRRESSSAEEDIIDGFAMASFVTLEALEKDVALKPQERVEKRQNPLAKKKREALTNGLAYLPKKNRLHHHQYSSDRENDRNLCQHLGKRKKLPKGLRQLKPGQNSCRDSDSESASGESKGFHRSSSRERLSDSSAPSSLGTGYFCDSDSDQEEKASDASSEKLFNAVTNKDKELGVSALAENADPGARGPAVPKISGLERSQEKSQDSSKDPILEPVVPKDPCPQAAQPLAQPQLEPQPEAPCPSPVLAPRPEAPAPPAPPPAAQPPPAPEEATRQPAPQPPIQHPPRPQSPVQPAHPNLPPVQPHPAAQSLSQPLSAYNSSSLSLNSLSSSRSSTPAKTQAPPPHISHHPSASPFPLSLPSHSPLHTFTPTLQPPAHPHHPNMFAPPTALPPPPPLTSGTLQVPGHPAGSTYSEQDLLRQELNTRFLASQSADRGASLGPPPYLRTEFHQHQHQHQHTHQHTHQHTFTPFPHAIPPTAIMPTPAPPMVRTPGRNFDKYPTKVDPFYRHSLFHSYPPAVSGIPPMIPPTGPFGSLQGAFQPKTSNPIDVAARPGTVPHTLLQKDPRLTDPFRPMLRKPGKWCAMHVHIAWQIYHHQQKVKKQMQSDPHKLDFGLKPEFLSRPPGPSLFGAIHHPHDLARPSTLFSTASGAHPAGTPFGPPPHHSNFLNPAAHLEPFNRPASFSGLTAVGSNAFGGLGNPTVTPNSMFGHKDGPSMQSFSNPHEPWNRLHRTPPSFPTPPPWLKPGELERSSSAAAHDRDRDVDKRDSSVSKDDKERESIEKRHSSHPSPAPIHPVNSLGHNRSSNEQIRSHLNPEVREKEKPKERERDHSESRKEINVEEHKVKDNYISEKEGLSHESRVVEESKQMSRVPSPYARPPVVESTRPNSTSNRETERKNEPAYDNPKKSNEVKVKEERKEDHDVQPEGPQTHRSSDQPPPISTSNVHPSPLVSMPMTVGVTGIHHMNSISGLDRTRMMTPFMGISPIPGGERFPYPSFHWDPMRDPLRDPYRELDIHRRDPLGRDFLLRNDPLHRLSTPRLYEADRSFRDREPHDYNHHHHHHHPLSVDPRREHERGNHLDDRERLHMLREDYEHARLHSVHPATLDGHLPHPSLITPGLPSMHYPRVSPPTGHQNGILNKTPPTAALSAPPPLISTLGPRPGSPRRTTPLSTEMRERPPSHTLKDIEAR
SIO_010081: AUTS2
subclass of: SO_0000673
so part of: AUTS2
location: complement(join(1684131..1685370,1690358..1690580,1691493..1691576,1693367..1693444,1693966..1694107,1698000..1698071,1699527..1699556,1701277..1701348,1702653..1702748,1706749..1706793,1707240..1707481,1708438..1708691,1710252..1710729,1755165..1755213,1917975..1918004,2100226..2100261,2108197..2108298,2246775..2246984,2442630..2442923))
location: region:1684131-2442923:-1
so has part: feature:2442630-2442923:-1:exon
so has part: feature:2246775-2246984:-1:exon
so has part: feature:2108197-2108298:-1:exon
so has part: feature:2100226-2100261:-1:exon
so has part: feature:1917975-1918004:-1:exon
so has part: feature:1755165-1755213:-1:exon
so has part: feature:1710252-1710729:-1:exon
so has part: feature:1708438-1708691:-1:exon
so has part: feature:1707240-1707481:-1:exon
so has part: feature:1706749-1706793:-1:exon
so has part: feature:1702653-1702748:-1:exon
so has part: feature:1701277-1701348:-1:exon
so has part: feature:1699527-1699556:-1:exon
so has part: feature:1698000-1698071:-1:exon
so has part: feature:1693966-1694107:-1:exon
so has part: feature:1693367-1693444:-1:exon
so has part: feature:1691493-1691576:-1:exon
so has part: feature:1690358-1690580:-1:exon
so has part: feature:1684131-1685370:-1:exon

XP_032056605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2442630-2442923:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2246775-2246984:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2108197-2108298:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2100226-2100261:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1917975-1918004:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1755165-1755213:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1710252-1710729:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1708438-1708691:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1707240-1707481:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1706749-1706793:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1702653-1702748:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1701277-1701348:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1699527-1699556:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1698000-1698071:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1693966-1694107:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1693367-1693444:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1691493-1691576:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1690358-1690580:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1684131-1685370:-1:exon

CASTOR2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: CASTOR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3056353..3183997
location: region:3056353-3183997:1
so has part: feature:3056353-3183997:1:exon
subclass of: SO_0000010

116497127
type: Gene
SIO_000068: ncbigene

position:3056353:1
position: 3056353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3183997:1
position: 3183997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3056353-3183997:1:exon

CASTOR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: CASTOR2
product: cytosolic arginine sensor for mTORC1 subunit 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032200666.1
SIO_010081: CASTOR2
subclass of: SO_0000673
so part of: CASTOR2
location: join(3056353..3056623,3120844..3120914,3165161..3165354,3166153..3166285,3167571..3167694,3168289..3168399,3169791..3169873,3170837..3170931,3175259..3183997)
location: region:3056353-3183997:1
so has part: feature:3056353-3056623:1:exon
so has part: feature:3120844-3120914:1:exon
so has part: feature:3165161-3165354:1:exon
so has part: feature:3166153-3166285:1:exon
so has part: feature:3167571-3167694:1:exon
so has part: feature:3168289-3168399:1:exon
so has part: feature:3169791-3169873:1:exon
so has part: feature:3170837-3170931:1:exon
so has part: feature:3175259-3183997:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3056353-3056623:1:exon

position:3056623:1
position: 3056623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3120844-3120914:1:exon

position:3120844:1
position: 3120844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3120914:1
position: 3120914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3165161-3165354:1:exon

position:3165161:1
position: 3165161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3165354:1
position: 3165354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3166153-3166285:1:exon

position:3166153:1
position: 3166153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3166285:1
position: 3166285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3167571-3167694:1:exon

position:3167571:1
position: 3167571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3167694:1
position: 3167694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3168289-3168399:1:exon

position:3168289:1
position: 3168289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3168399:1
position: 3168399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3169791-3169873:1:exon

position:3169791:1
position: 3169791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3169873:1
position: 3169873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3170837-3170931:1:exon

position:3170837:1
position: 3170837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3170931:1
position: 3170931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3175259-3183997:1:exon

position:3175259:1
position: 3175259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CASTOR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: CASTOR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic arginine sensor for mTORC1 subunit 2
translation: MELHILEHRLRVASIAKESIQLFTYGLIKLAFLSSKTRCKFFSLTETPEDYTIIVDEEGFLELPSSEHLSVADATWLALNVVSGGGGFSGSQPIGVTKIAKSVIAPLADQNISVFMLSTYQTDFILVRERDLPFVMHTLAAEFTILRVVNGETVAADDLGITNGFVKPKLVQRPVIHPLSSPSNMFCVTSLDPDTLPTVATLLMDVMFYSNGVKDSVVGNEDSGHIRFFSFSLIEGYISLVMDVQTQQRFPNNLLFTSASGELWKMVRIGGQPLGFDECGIVAQISEPLAAADIPAYYISTFKFDHALVPEENINGVVNALQVSQAEKH
SIO_010081: CASTOR2
subclass of: SO_0000673
so part of: CASTOR2
location: join(3056511..3056623,3120844..3120914,3165161..3165354,3166153..3166285,3167571..3167694,3168289..3168399,3169791..3169873,3170837..3170931,3175259..3175324)
location: region:3056511-3175324:1
so has part: feature:3056511-3056623:1:exon
so has part: feature:3120844-3120914:1:exon
so has part: feature:3165161-3165354:1:exon
so has part: feature:3166153-3166285:1:exon
so has part: feature:3167571-3167694:1:exon
so has part: feature:3168289-3168399:1:exon
so has part: feature:3169791-3169873:1:exon
so has part: feature:3170837-3170931:1:exon
so has part: feature:3175259-3175324:1:exon

XP_032056557.1
type: Protein
SIO_000068: ncbiprotein

position:3056511:1
position: 3056511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3175324:1
position: 3175324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3056511-3056623:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3120844-3120914:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3165161-3165354:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3166153-3166285:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3167571-3167694:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3168289-3168399:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3169791-3169873:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3170837-3170931:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3175259-3175324:1:exon

RCC1L
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: RCC1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3187152..3202450)
location: region:3187152-3202450:-1
so has part: feature:3187152-3202450:-1:exon
subclass of: SO_0000010

116497453
type: Gene
SIO_000068: ncbigene

position:3187152:-1
position: 3187152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3202450:-1
position: 3202450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3187152-3202450:-1:exon

RCC1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: RCC1L
product: RCC1 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032201198.1
SIO_010081: RCC1L
subclass of: SO_0000673
so part of: RCC1L
location: complement(join(3187152..3188227,3189837..3189922,3191269..3191442,3192504..3192588,3194787..3194968,3195907..3195991,3197295..3197346,3198448..3198514,3199391..3199519,3201872..3202450))
location: region:3187152-3202450:-1
so has part: feature:3201872-3202450:-1:exon
so has part: feature:3199391-3199519:-1:exon
so has part: feature:3198448-3198514:-1:exon
so has part: feature:3197295-3197346:-1:exon
so has part: feature:3195907-3195991:-1:exon
so has part: feature:3194787-3194968:-1:exon
so has part: feature:3192504-3192588:-1:exon
so has part: feature:3191269-3191442:-1:exon
so has part: feature:3189837-3189922:-1:exon
so has part: feature:3187152-3188227:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3201872-3202450:-1:exon

position:3201872:-1
position: 3201872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3199391-3199519:-1:exon

position:3199391:-1
position: 3199391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3199519:-1
position: 3199519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3198448-3198514:-1:exon

position:3198448:-1
position: 3198448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3198514:-1
position: 3198514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3197295-3197346:-1:exon

position:3197295:-1
position: 3197295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3197346:-1
position: 3197346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3195907-3195991:-1:exon

position:3195907:-1
position: 3195907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3195991:-1
position: 3195991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3194787-3194968:-1:exon

position:3194787:-1
position: 3194787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3194968:-1
position: 3194968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3192504-3192588:-1:exon

position:3192504:-1
position: 3192504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3192588:-1
position: 3192588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3191269-3191442:-1:exon

position:3191269:-1
position: 3191269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3191442:-1
position: 3191442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3189837-3189922:-1:exon

position:3189837:-1
position: 3189837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3189922:-1
position: 3189922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3187152-3188227:-1:exon

position:3188227:-1
position: 3188227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RCC1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: RCC1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RCC1-like G exchanging factor-like protein
translation: MGLNKDSQLGFQRSIRDRTKGYEYVLEPSPIPLPLEKPQQTRVLQVSCGRAHSLILTDSEGVFTMGNNSYGQCGRKIVEDEIYSESHLIHQLNDFDSRVVQVVCGQDHSLFRTEKGTVFACGWGADGQTGLGHYNITSVPTKLGGDIAGVNIIQVSSYGDCCLAVSDKGDLFGWGNSEYLQLASVTETTQVSVPRHLPFKIGKIKEAACGGTGNAVLTEEGNVFVWGYGILGKGPNLTETAVPEMIPPSLFGWSDLNPDVRVAHVRCGLSQFAALTNRGELFVWGKNLRGCLGIGRMEDQYFPWRVTVPGEVVDVACGVDHMVSMVKSFT
SIO_010081: RCC1L
subclass of: SO_0000673
so part of: RCC1L
location: complement(join(3188150..3188227,3189837..3189922,3191269..3191442,3192504..3192588,3194787..3194968,3195907..3195991,3197295..3197346,3198448..3198514,3199391..3199519,3201872..3201926))
location: region:3188150-3201926:-1
so has part: feature:3201872-3201926:-1:exon
so has part: feature:3199391-3199519:-1:exon
so has part: feature:3198448-3198514:-1:exon
so has part: feature:3197295-3197346:-1:exon
so has part: feature:3195907-3195991:-1:exon
so has part: feature:3194787-3194968:-1:exon
so has part: feature:3192504-3192588:-1:exon
so has part: feature:3191269-3191442:-1:exon
so has part: feature:3189837-3189922:-1:exon
so has part: feature:3188150-3188227:-1:exon

XP_032057089.1
type: Protein
SIO_000068: ncbiprotein

position:3188150:-1
position: 3188150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3201926:-1
position: 3201926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3201872-3201926:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3199391-3199519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3198448-3198514:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3197295-3197346:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3195907-3195991:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3194787-3194968:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3192504-3192588:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3191269-3191442:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3189837-3189922:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3188150-3188227:-1:exon

NCF1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: NCF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3204080..3212244)
location: region:3204080-3212244:-1
so has part: feature:3204080-3212244:-1:exon
subclass of: SO_0000010

116497293
type: Gene
SIO_000068: ncbigene

position:3204080:-1
position: 3204080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3212244:-1
position: 3212244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3204080-3212244:-1:exon

NCF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: NCF1
product: neutrophil cytosolic factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032200977.1
SIO_010081: NCF1
subclass of: SO_0000673
so part of: NCF1
location: complement(join(3204080..3204636,3205262..3205404,3207024..3207131,3207836..3207953,3208605..3208712,3209216..3209338,3209449..3209504,3209751..3209916,3211225..3211300,3211617..3211697,3212173..3212244))
location: region:3204080-3212244:-1
so has part: feature:3212173-3212244:-1:exon
so has part: feature:3211617-3211697:-1:exon
so has part: feature:3211225-3211300:-1:exon
so has part: feature:3209751-3209916:-1:exon
so has part: feature:3209449-3209504:-1:exon
so has part: feature:3209216-3209338:-1:exon
so has part: feature:3208605-3208712:-1:exon
so has part: feature:3207836-3207953:-1:exon
so has part: feature:3207024-3207131:-1:exon
so has part: feature:3205262-3205404:-1:exon
so has part: feature:3204080-3204636:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3212173-3212244:-1:exon

position:3212173:-1
position: 3212173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3211617-3211697:-1:exon

position:3211617:-1
position: 3211617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3211697:-1
position: 3211697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3211225-3211300:-1:exon

position:3211225:-1
position: 3211225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3211300:-1
position: 3211300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3209751-3209916:-1:exon

position:3209751:-1
position: 3209751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3209916:-1
position: 3209916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3209449-3209504:-1:exon

position:3209449:-1
position: 3209449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3209504:-1
position: 3209504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3209216-3209338:-1:exon

position:3209216:-1
position: 3209216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3209338:-1
position: 3209338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3208605-3208712:-1:exon

position:3208605:-1
position: 3208605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3208712:-1
position: 3208712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3207836-3207953:-1:exon

position:3207836:-1
position: 3207836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3207953:-1
position: 3207953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3207024-3207131:-1:exon

position:3207024:-1
position: 3207024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3207131:-1
position: 3207131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3205262-3205404:-1:exon

position:3205262:-1
position: 3205262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3205404:-1
position: 3205404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3204080-3204636:-1:exon

position:3204636:-1
position: 3204636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NCF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: NCF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neutrophil cytosol factor 1
translation: MGDAFIRHIELLGYEKRFFPSQHYVYMFLVKWNDLTEKLVYRRFTEIYEFHKTLKEMFPIESGDINPENRIIPHLPAPRWFDGQRSTQSRQGTLAEYCYALVNLPHKISRCLLVVNFFKVRPDDTSPVTDSQIKKPEVFLLPKDAKKNASDITGPIILQTYRAIADYEKSSKSEMALKAGDMVDIVEKSESGWWFCQLKNKRGWVPAAYLEPMDGPDESEEQEPNYAGEWYVVQKSYTAVEEDELTLTEGDTIEVIHKLLDGWWVVRKDESTGYYPSMYLQRSGEPNTPEKSELRNRSVPPRRSTIRNAKSIHKQSRKQISQETYRRNSRKYIQSRRNVKASLQNKANIISEKNEQEENKSKAQPAVPPRPSKDLIMNRCTESTRRKIM
SIO_010081: NCF1
subclass of: SO_0000673
so part of: NCF1
location: complement(join(3204518..3204636,3205262..3205404,3207024..3207131,3207836..3207953,3208605..3208712,3209216..3209338,3209449..3209504,3209751..3209916,3211225..3211300,3211617..3211697,3212173..3212244))
location: region:3204518-3212244:-1
so has part: feature:3212173-3212244:-1:exon
so has part: feature:3211617-3211697:-1:exon
so has part: feature:3211225-3211300:-1:exon
so has part: feature:3209751-3209916:-1:exon
so has part: feature:3209449-3209504:-1:exon
so has part: feature:3209216-3209338:-1:exon
so has part: feature:3208605-3208712:-1:exon
so has part: feature:3207836-3207953:-1:exon
so has part: feature:3207024-3207131:-1:exon
so has part: feature:3205262-3205404:-1:exon
so has part: feature:3204518-3204636:-1:exon

XP_032056868.1
type: Protein
SIO_000068: ncbiprotein

position:3204518:-1
position: 3204518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3212173-3212244:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3211617-3211697:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3211225-3211300:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3209751-3209916:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3209449-3209504:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3209216-3209338:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3208605-3208712:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3207836-3207953:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3207024-3207131:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3205262-3205404:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3204518-3204636:-1:exon

GTF2I
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: GTF2I
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3214188..3286555)
location: region:3214188-3286555:-1
so has part: feature:3214188-3286555:-1:exon
subclass of: SO_0000010

116497153
type: Gene
SIO_000068: ncbigene

position:3214188:-1
position: 3214188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3286555:-1
position: 3286555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3214188-3286555:-1:exon

GTF2I
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: GTF2I
product: general transcription factor IIi, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032200717.1
SIO_010081: GTF2I
subclass of: SO_0000673
so part of: GTF2I
location: complement(join(3214188..3216475,3219233..3219305,3222146..3222184,3225069..3225097,3226162..3226345,3227158..3227241,3228000..3228110,3229851..3229903,3230512..3230695,3231532..3231597,3232404..3232499,3232949..3233032,3233695..3233753,3234235..3234418,3234950..3235021,3236638..3236696,3237010..3237193,3237923..3237994,3241285..3241343,3243169..3243352,3247397..3247462,3251893..3251994,3253685..3253747,3257574..3257630,3262759..3262836,3264306..3264349,3265116..3265164,3266368..3266396,3266601..3266784,3267808..3267942,3279912..3280050,3281042..3281147,3286499..3286555))
location: region:3214188-3286555:-1
so has part: feature:3286499-3286555:-1:exon
so has part: feature:3281042-3281147:-1:exon
so has part: feature:3279912-3280050:-1:exon
so has part: feature:3267808-3267942:-1:exon
so has part: feature:3266601-3266784:-1:exon
so has part: feature:3266368-3266396:-1:exon
so has part: feature:3265116-3265164:-1:exon
so has part: feature:3264306-3264349:-1:exon
so has part: feature:3262759-3262836:-1:exon
so has part: feature:3257574-3257630:-1:exon
so has part: feature:3253685-3253747:-1:exon
so has part: feature:3251893-3251994:-1:exon
so has part: feature:3247397-3247462:-1:exon
so has part: feature:3243169-3243352:-1:exon
so has part: feature:3241285-3241343:-1:exon
so has part: feature:3237923-3237994:-1:exon
so has part: feature:3237010-3237193:-1:exon
so has part: feature:3236638-3236696:-1:exon
so has part: feature:3234950-3235021:-1:exon
so has part: feature:3234235-3234418:-1:exon
so has part: feature:3233695-3233753:-1:exon
so has part: feature:3232949-3233032:-1:exon
so has part: feature:3232404-3232499:-1:exon
so has part: feature:3231532-3231597:-1:exon
so has part: feature:3230512-3230695:-1:exon
so has part: feature:3229851-3229903:-1:exon
so has part: feature:3228000-3228110:-1:exon
so has part: feature:3227158-3227241:-1:exon
so has part: feature:3226162-3226345:-1:exon
so has part: feature:3225069-3225097:-1:exon
so has part: feature:3222146-3222184:-1:exon
so has part: feature:3219233-3219305:-1:exon
so has part: feature:3214188-3216475:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3286499-3286555:-1:exon

position:3286499:-1
position: 3286499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3281042-3281147:-1:exon

position:3281042:-1
position: 3281042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3281147:-1
position: 3281147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3279912-3280050:-1:exon

position:3279912:-1
position: 3279912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3280050:-1
position: 3280050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3267808-3267942:-1:exon

position:3267808:-1
position: 3267808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3267942:-1
position: 3267942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3266601-3266784:-1:exon

position:3266601:-1
position: 3266601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3266784:-1
position: 3266784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3266368-3266396:-1:exon

position:3266368:-1
position: 3266368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3266396:-1
position: 3266396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3265116-3265164:-1:exon

position:3265116:-1
position: 3265116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3265164:-1
position: 3265164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3264306-3264349:-1:exon

position:3264306:-1
position: 3264306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3264349:-1
position: 3264349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3262759-3262836:-1:exon

position:3262759:-1
position: 3262759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3262836:-1
position: 3262836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3257574-3257630:-1:exon

position:3257574:-1
position: 3257574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3257630:-1
position: 3257630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3253685-3253747:-1:exon

position:3253685:-1
position: 3253685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3253747:-1
position: 3253747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3251893-3251994:-1:exon

position:3251893:-1
position: 3251893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3251994:-1
position: 3251994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3247397-3247462:-1:exon

position:3247397:-1
position: 3247397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3247462:-1
position: 3247462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3243169-3243352:-1:exon

position:3243169:-1
position: 3243169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3243352:-1
position: 3243352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3241285-3241343:-1:exon

position:3241285:-1
position: 3241285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3241343:-1
position: 3241343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3237923-3237994:-1:exon

position:3237923:-1
position: 3237923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3237994:-1
position: 3237994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3237010-3237193:-1:exon

position:3237010:-1
position: 3237010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3237193:-1
position: 3237193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3236638-3236696:-1:exon

position:3236638:-1
position: 3236638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3236696:-1
position: 3236696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3234950-3235021:-1:exon

position:3234950:-1
position: 3234950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3235021:-1
position: 3235021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3234235-3234418:-1:exon

position:3234235:-1
position: 3234235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3234418:-1
position: 3234418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3233695-3233753:-1:exon

position:3233695:-1
position: 3233695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3233753:-1
position: 3233753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3232949-3233032:-1:exon

position:3232949:-1
position: 3232949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3233032:-1
position: 3233032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3232404-3232499:-1:exon

position:3232404:-1
position: 3232404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3232499:-1
position: 3232499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3231532-3231597:-1:exon

position:3231532:-1
position: 3231532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3231597:-1
position: 3231597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3230512-3230695:-1:exon

position:3230512:-1
position: 3230512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3230695:-1
position: 3230695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3229851-3229903:-1:exon

position:3229851:-1
position: 3229851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3229903:-1
position: 3229903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3228000-3228110:-1:exon

position:3228000:-1
position: 3228000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3228110:-1
position: 3228110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3227158-3227241:-1:exon

position:3227158:-1
position: 3227158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3227241:-1
position: 3227241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:3226162-3226345:-1:exon

position:3226162:-1
position: 3226162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3226345:-1
position: 3226345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:3225069-3225097:-1:exon

position:3225069:-1
position: 3225069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3225097:-1
position: 3225097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:3222146-3222184:-1:exon

position:3222146:-1
position: 3222146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3222184:-1
position: 3222184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:3219233-3219305:-1:exon

position:3219233:-1
position: 3219233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3219305:-1
position: 3219305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:3214188-3216475:-1:exon

position:3216475:-1
position: 3216475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GTF2I
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: GTF2I
product: general transcription factor IIi, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032200716.1
SIO_010081: GTF2I
subclass of: SO_0000673
so part of: GTF2I
location: complement(join(3214188..3216471,3219233..3219305,3222146..3222184,3225069..3225097,3226162..3226345,3227158..3227241,3228000..3228110,3229851..3229903,3230512..3230695,3231532..3231597,3232404..3232499,3232949..3233032,3233695..3233753,3234235..3234418,3234950..3235021,3236638..3236696,3237010..3237193,3237923..3237994,3241285..3241343,3243169..3243352,3247397..3247462,3251893..3251994,3253685..3253747,3257574..3257633,3262759..3262836,3264306..3264349,3265116..3265164,3266368..3266396,3266601..3266784,3267808..3267942,3279912..3280050,3281042..3281147,3286499..3286555))
location: region:3214188-3286555:-1
so has part: feature:3286499-3286555:-1:exon
so has part: feature:3281042-3281147:-1:exon
so has part: feature:3279912-3280050:-1:exon
so has part: feature:3267808-3267942:-1:exon
so has part: feature:3266601-3266784:-1:exon
so has part: feature:3266368-3266396:-1:exon
so has part: feature:3265116-3265164:-1:exon
so has part: feature:3264306-3264349:-1:exon
so has part: feature:3262759-3262836:-1:exon
so has part: feature:3257574-3257633:-1:exon
so has part: feature:3253685-3253747:-1:exon
so has part: feature:3251893-3251994:-1:exon
so has part: feature:3247397-3247462:-1:exon
so has part: feature:3243169-3243352:-1:exon
so has part: feature:3241285-3241343:-1:exon
so has part: feature:3237923-3237994:-1:exon
so has part: feature:3237010-3237193:-1:exon
so has part: feature:3236638-3236696:-1:exon
so has part: feature:3234950-3235021:-1:exon
so has part: feature:3234235-3234418:-1:exon
so has part: feature:3233695-3233753:-1:exon
so has part: feature:3232949-3233032:-1:exon
so has part: feature:3232404-3232499:-1:exon
so has part: feature:3231532-3231597:-1:exon
so has part: feature:3230512-3230695:-1:exon
so has part: feature:3229851-3229903:-1:exon
so has part: feature:3228000-3228110:-1:exon
so has part: feature:3227158-3227241:-1:exon
so has part: feature:3226162-3226345:-1:exon
so has part: feature:3225069-3225097:-1:exon
so has part: feature:3222146-3222184:-1:exon
so has part: feature:3219233-3219305:-1:exon
so has part: feature:3214188-3216471:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3286499-3286555:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3281042-3281147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3279912-3280050:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3267808-3267942:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3266601-3266784:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3266368-3266396:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3265116-3265164:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3264306-3264349:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3262759-3262836:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3257574-3257633:-1:exon

position:3257633:-1
position: 3257633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3253685-3253747:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3251893-3251994:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3247397-3247462:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3243169-3243352:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3241285-3241343:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3237923-3237994:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3237010-3237193:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3236638-3236696:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3234950-3235021:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3234235-3234418:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3233695-3233753:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3232949-3233032:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3232404-3232499:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3231532-3231597:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3230512-3230695:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3229851-3229903:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3228000-3228110:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3227158-3227241:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3226162-3226345:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3225069-3225097:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3222146-3222184:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:3219233-3219305:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:3214188-3216471:-1:exon

position:3216471:-1
position: 3216471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GTF2I
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: GTF2I
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor II-I isoform X2
translation: MAQATAPAASIHDEDPSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTERGRAFVNSRKDFQKDFVKYCVTEEERAAEMQKTKTLPSVNRLTVDIMELEALRKSVEDFFCFCYGKALGKSTVVPVPYEKIQRDQSAVVVQGLPEGLAFKHPANYDVSTLKWILENKSGISFIIKRPFLEPKKHLGAHMTDPSHSIIPPGGSCPPIQVKTEPNEDSGISLEMSTVTVKEESEDPDYYQYNIPGPSETSEMDEKIALAKSYTDSSQHTPSETSEDPEVEVTIEDDEDYSPPNKKPKNTESANETANTGRRKVREFNFEKWNARITDLRKQVEELFEKKYAQAIKAKGPVSIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELLNSTREDVPLDKPVAGVKEEWYARITKLRKMVDQLFCKKFAEALGSTEPKAVPYQKFEAHPTDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTLSSTEVIQPRTNTPVKEDWNVRITKLRKQVEEIFNMKFAQALGISEAVKVPYPVFESNPEYLYVEGLPEGIPFRSPTWFGIPRLERIVRGSGKIKFVVKKPELVTSYLPPGLASKVNTKAMSPKSLKRSRSPASNSKVPEIEVTVDEGLNKPQTTDVRTNSQTNGSNMSFKPRGREFSFEAWNAKITDLKQKVENLFNEKCGEALGLSEPVKVPFALFESFPEVFYVEGLPEGVPFRRPSTFGIPRLEKILRNKSKIKFIIKKPEMFEAAVKESSAKSPQRKNNSSNIANTASSTTNTVVNTAAGVEDLNIIQVTIPDDESERLSKVEKARQLREQVNDLFSRKFGEAIGMNFPVKVPYRKITINPGCVVVDGMPPGVAFKAPSYLEISSMRKILESSEFIKFTVIRPFPGLVINNQPAEPSQIEVSVGDVMETEESSQIKQEPDPTW
SIO_010081: GTF2I
subclass of: SO_0000673
so part of: GTF2I
location: complement(join(3219247..3219305,3222146..3222184,3225069..3225097,3226162..3226345,3227158..3227241,3228000..3228110,3229851..3229903,3230512..3230695,3231532..3231597,3232404..3232499,3232949..3233032,3233695..3233753,3234235..3234418,3234950..3235021,3236638..3236696,3237010..3237193,3237923..3237994,3241285..3241343,3243169..3243352,3247397..3247462,3251893..3251994,3253685..3253747,3257574..3257630,3262759..3262836,3264306..3264349,3265116..3265164,3266368..3266396,3266601..3266784,3267808..3267942,3279912..3280050,3281042..3281140))
location: region:3219247-3281140:-1
so has part: feature:3281042-3281140:-1:exon
so has part: feature:3279912-3280050:-1:exon
so has part: feature:3267808-3267942:-1:exon
so has part: feature:3266601-3266784:-1:exon
so has part: feature:3266368-3266396:-1:exon
so has part: feature:3265116-3265164:-1:exon
so has part: feature:3264306-3264349:-1:exon
so has part: feature:3262759-3262836:-1:exon
so has part: feature:3257574-3257630:-1:exon
so has part: feature:3253685-3253747:-1:exon
so has part: feature:3251893-3251994:-1:exon
so has part: feature:3247397-3247462:-1:exon
so has part: feature:3243169-3243352:-1:exon
so has part: feature:3241285-3241343:-1:exon
so has part: feature:3237923-3237994:-1:exon
so has part: feature:3237010-3237193:-1:exon
so has part: feature:3236638-3236696:-1:exon
so has part: feature:3234950-3235021:-1:exon
so has part: feature:3234235-3234418:-1:exon
so has part: feature:3233695-3233753:-1:exon
so has part: feature:3232949-3233032:-1:exon
so has part: feature:3232404-3232499:-1:exon
so has part: feature:3231532-3231597:-1:exon
so has part: feature:3230512-3230695:-1:exon
so has part: feature:3229851-3229903:-1:exon
so has part: feature:3228000-3228110:-1:exon
so has part: feature:3227158-3227241:-1:exon
so has part: feature:3226162-3226345:-1:exon
so has part: feature:3225069-3225097:-1:exon
so has part: feature:3222146-3222184:-1:exon
so has part: feature:3219247-3219305:-1:exon

XP_032056608.1
type: Protein
SIO_000068: ncbiprotein

position:3219247:-1
position: 3219247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3281140:-1
position: 3281140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3281042-3281140:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3279912-3280050:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3267808-3267942:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3266601-3266784:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3266368-3266396:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3265116-3265164:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3264306-3264349:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3262759-3262836:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3257574-3257630:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3253685-3253747:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3251893-3251994:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3247397-3247462:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3243169-3243352:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3241285-3241343:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3237923-3237994:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3237010-3237193:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3236638-3236696:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3234950-3235021:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3234235-3234418:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3233695-3233753:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3232949-3233032:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3232404-3232499:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3231532-3231597:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3230512-3230695:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3229851-3229903:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3228000-3228110:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3227158-3227241:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3226162-3226345:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3225069-3225097:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3222146-3222184:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3219247-3219305:-1:exon

GTF2I
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: GTF2I
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor II-I isoform X1
translation: MAQATAPAASIHDEDPSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTERGRAFVNSRKDFQKDFVKYCVTEEERAAEMQKTKTLPSVNRLTVDIMELEALRKSVEDFFCFCYGKALGKSTVVPVPYEKIQRDQSAVVVQGLPEGLAFKHPANYDVSTLKWILENKSGISFIIKRPFLEPKKHLGAHMTDPSHSIIPPGGSCPPIQVKTEPNEDSGISLEMSTVTVKEESEDPDYYQYNIPAGPSETSEMDEKIALAKSYTDSSQHTPSETSEDPEVEVTIEDDEDYSPPNKKPKNTESANETANTGRRKVREFNFEKWNARITDLRKQVEELFEKKYAQAIKAKGPVSIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELLNSTREDVPLDKPVAGVKEEWYARITKLRKMVDQLFCKKFAEALGSTEPKAVPYQKFEAHPTDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTLSSTEVIQPRTNTPVKEDWNVRITKLRKQVEEIFNMKFAQALGISEAVKVPYPVFESNPEYLYVEGLPEGIPFRSPTWFGIPRLERIVRGSGKIKFVVKKPELVTSYLPPGLASKVNTKAMSPKSLKRSRSPASNSKVPEIEVTVDEGLNKPQTTDVRTNSQTNGSNMSFKPRGREFSFEAWNAKITDLKQKVENLFNEKCGEALGLSEPVKVPFALFESFPEVFYVEGLPEGVPFRRPSTFGIPRLEKILRNKSKIKFIIKKPEMFEAAVKESSAKSPQRKNNSSNIANTASSTTNTVVNTAAGVEDLNIIQVTIPDDESERLSKVEKARQLREQVNDLFSRKFGEAIGMNFPVKVPYRKITINPGCVVVDGMPPGVAFKAPSYLEISSMRKILESSEFIKFTVIRPFPGLVINNQPAEPSQIEVSVGDVMETEESSQIKQEPDPTW
SIO_010081: GTF2I
subclass of: SO_0000673
so part of: GTF2I
location: complement(join(3219247..3219305,3222146..3222184,3225069..3225097,3226162..3226345,3227158..3227241,3228000..3228110,3229851..3229903,3230512..3230695,3231532..3231597,3232404..3232499,3232949..3233032,3233695..3233753,3234235..3234418,3234950..3235021,3236638..3236696,3237010..3237193,3237923..3237994,3241285..3241343,3243169..3243352,3247397..3247462,3251893..3251994,3253685..3253747,3257574..3257633,3262759..3262836,3264306..3264349,3265116..3265164,3266368..3266396,3266601..3266784,3267808..3267942,3279912..3280050,3281042..3281140))
location: region:3219247-3281140:-1
so has part: feature:3281042-3281140:-1:exon
so has part: feature:3279912-3280050:-1:exon
so has part: feature:3267808-3267942:-1:exon
so has part: feature:3266601-3266784:-1:exon
so has part: feature:3266368-3266396:-1:exon
so has part: feature:3265116-3265164:-1:exon
so has part: feature:3264306-3264349:-1:exon
so has part: feature:3262759-3262836:-1:exon
so has part: feature:3257574-3257633:-1:exon
so has part: feature:3253685-3253747:-1:exon
so has part: feature:3251893-3251994:-1:exon
so has part: feature:3247397-3247462:-1:exon
so has part: feature:3243169-3243352:-1:exon
so has part: feature:3241285-3241343:-1:exon
so has part: feature:3237923-3237994:-1:exon
so has part: feature:3237010-3237193:-1:exon
so has part: feature:3236638-3236696:-1:exon
so has part: feature:3234950-3235021:-1:exon
so has part: feature:3234235-3234418:-1:exon
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so has part: feature:3219247-3219305:-1:exon

XP_032056607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
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urn:…
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urn:…
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SIO_000628: feature:3219247-3219305:-1:exon

GTF2IRD1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: GTF2IRD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3295393..3352037)
location: region:3295393-3352037:-1
so has part: feature:3295393-3352037:-1:exon
subclass of: SO_0000010

116497382
type: Gene
SIO_000068: ncbigene

position:3295393:-1
position: 3295393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3352037:-1
position: 3352037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3295393-3352037:-1:exon

GTF2IRD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: GTF2IRD1
product: GTF2I repeat domain containing 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032201116.1
SIO_010081: GTF2IRD1
subclass of: SO_0000673
so part of: GTF2IRD1
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urn:…
SIO_000300: 1
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urn:…
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urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
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urn:…
SIO_000300: 10
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urn:…
SIO_000300: 11
SIO_000628: feature:3318382-3318502:-1:exon

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urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
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urn:…
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urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
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urn:…
SIO_000300: 18
SIO_000628: feature:3309751-3309809:-1:exon

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urn:…
SIO_000300: 19
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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
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urn:…
SIO_000300: 23
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SIO_000300: 24
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urn:…
SIO_000300: 25
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urn:…
SIO_000300: 26
SIO_000628: feature:3296185-3296321:-1:exon

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urn:…
SIO_000300: 27
SIO_000628: feature:3295393-3295531:-1:exon

position:3295531:-1
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reference: sequence
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GTF2IRD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: GTF2IRD1
product: GTF2I repeat domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032201113.1
SIO_010081: GTF2IRD1
subclass of: SO_0000673
so part of: GTF2IRD1
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location: region:3295393-3352037:-1
so has part: feature:3351999-3352037:-1:exon
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urn:…
SIO_000300: 1
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SIO_000628: feature:3315394-3315431:-1:exon

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SIO_000628: feature:3312509-3312568:-1:exon

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urn:…
SIO_000300: 23
SIO_000628: feature:3302350-3302397:-1:exon

position:3302350:-1
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position:3302397:-1
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urn:…
SIO_000300: 24
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SIO_000628: feature:3296185-3296321:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3295393-3295531:-1:exon

GTF2IRD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: GTF2IRD1
product: GTF2I repeat domain containing 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032201115.1
SIO_010081: GTF2IRD1
subclass of: SO_0000673
so part of: GTF2IRD1
location: complement(join(3295393..3295531,3296185..3296321,3297260..3297297,3297657..3297849,3299149..3299226,3302350..3302397,3306833..3306861,3307490..3307673,3308465..3308548,3309751..3309809,3310717..3310900,3311964..3312029,3312509..3312571,3312934..3313023,3314636..3314716,3315394..3315431,3318382..3318502,3320835..3320860,3321764..3321947,3322697..3322780,3323575..3323664,3324154..3324464,3325626..3325809,3329447..3329593,3332512..3332653,3334509..3334637,3351999..3352037))
location: region:3295393-3352037:-1
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so has part: feature:3311964-3312029:-1:exon
so has part: feature:3310717-3310900:-1:exon
so has part: feature:3309751-3309809:-1:exon
so has part: feature:3308465-3308548:-1:exon
so has part: feature:3307490-3307673:-1:exon
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so has part: feature:3295393-3295531:-1:exon

urn:…
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SIO_000628: feature:3351999-3352037:-1:exon

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SIO_000300: 2
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urn:…
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urn:…
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SIO_000628: feature:3321764-3321947:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3320835-3320860:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3318382-3318502:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3315394-3315431:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3314636-3314716:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3312934-3313023:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3312509-3312571:-1:exon

position:3312571:-1
position: 3312571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3311964-3312029:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3310717-3310900:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3309751-3309809:-1:exon

urn:…
SIO_000300: 19
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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
SIO_000628: feature:3306833-3306861:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3302350-3302397:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3299149-3299226:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3297657-3297849:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3297260-3297297:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3296185-3296321:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3295393-3295531:-1:exon

GTF2IRD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: GTF2IRD1
product: GTF2I repeat domain containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032201114.1
SIO_010081: GTF2IRD1
subclass of: SO_0000673
so part of: GTF2IRD1
location: complement(join(3295393..3295531,3296185..3296321,3297260..3297297,3297657..3297849,3299149..3299226,3306833..3306861,3307490..3307673,3308465..3308548,3309487..3309552,3309751..3309809,3310717..3310900,3311964..3312029,3312509..3312571,3312934..3313023,3314636..3314716,3315394..3315431,3318382..3318502,3320835..3320860,3321764..3321947,3322697..3322780,3323575..3323664,3324154..3324464,3325626..3325809,3329447..3329593,3332512..3332653,3334509..3334637,3351999..3352037))
location: region:3295393-3352037:-1
so has part: feature:3351999-3352037:-1:exon
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so has part: feature:3315394-3315431:-1:exon
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urn:…
SIO_000300: 1
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SIO_000628: feature:3321764-3321947:-1:exon

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SIO_000300: 14
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urn:…
SIO_000300: 15
SIO_000628: feature:3312509-3312571:-1:exon

urn:…
SIO_000300: 16
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urn:…
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SIO_000628: feature:3310717-3310900:-1:exon

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SIO_000300: 21
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urn:…
SIO_000300: 22
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urn:…
SIO_000300: 23
SIO_000628: feature:3299149-3299226:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3297657-3297849:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3297260-3297297:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3296185-3296321:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3295393-3295531:-1:exon

GTF2IRD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: GTF2IRD1
product: GTF2I repeat domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032201112.1
SIO_010081: GTF2IRD1
subclass of: SO_0000673
so part of: GTF2IRD1
location: complement(join(3295393..3295531,3296185..3296321,3297260..3297297,3297657..3297849,3299149..3299226,3302350..3302397,3306833..3306861,3307490..3307673,3308465..3308548,3309487..3309552,3309751..3309809,3310717..3310900,3311964..3312029,3312509..3312571,3312934..3313023,3314636..3314716,3315394..3315431,3318382..3318502,3320835..3320860,3321764..3321947,3322697..3322780,3323575..3323664,3324154..3324464,3325626..3325809,3329447..3329593,3332512..3332653,3334509..3334637,3351999..3352037))
location: region:3295393-3352037:-1
so has part: feature:3351999-3352037:-1:exon
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so has part: feature:3297260-3297297:-1:exon
so has part: feature:3296185-3296321:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:3351999-3352037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3334509-3334637:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3332512-3332653:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3329447-3329593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3325626-3325809:-1:exon

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SIO_000628: feature:3324154-3324464:-1:exon

urn:…
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SIO_000628: feature:3323575-3323664:-1:exon

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SIO_000300: 8
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SIO_000628: feature:3320835-3320860:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3318382-3318502:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3315394-3315431:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3314636-3314716:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3312934-3313023:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3312509-3312571:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3311964-3312029:-1:exon

urn:…
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SIO_000628: feature:3310717-3310900:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3309751-3309809:-1:exon

urn:…
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urn:…
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SIO_000628: feature:3308465-3308548:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3307490-3307673:-1:exon

urn:…
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urn:…
SIO_000300: 23
SIO_000628: feature:3302350-3302397:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3299149-3299226:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3297657-3297849:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3297260-3297297:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3296185-3296321:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3295393-3295531:-1:exon

GTF2IRD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: GTF2IRD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor II-I repeat domain-containing protein 1 isoform X5
translation: MALAGKPLDVTLSSSRPEQWNMVFPQKDEIITSLVSALDSMCSALSKLNAEVACIAVHDESTFVVGTEKGRVFLSARKELQADFQKFCRVQQRREQEAEAQKKAKECGRSMLRVSPDQGSDVYLLRKMVEEVFDVLYSEAVGKSSVVPLPYERFLKEPGLLAVAGLPEGISFKKPMEYDVKSLMAILEHSHSIRFRLKRPADEPSREPNPSVDLTCTSLAPKGSRDAGANGHMAKASGQDAPSAVAVTNFLYGVSLPTQIAVDLKQEVSSGLHGATAASEALLPRPSGELKVPSSQEYSDCCGQKSAVSGGPLIQNVHSSKRILFSIVHDKTDKWDSFIKETEDINTLRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIIGIPDKIPFKRPCTYGVPKLKRILEERHNIHFVIKRMFDERIFTGSKFTKDPTKLEPSSPPGEISPEPHRGAVLDLAGTSQAGSRSEKCSVSESCEPGTSGELGGIRQIKIEPDELDIIQITVPDRSPTSDEMHDPVTTHMASEESSYILDAVAGTEKGPGEESRHEEKQMEGSDGIGDVLSHLRKQVEILFNTRYAKAIGISEPVKVPYSKFLMYPEDLFVVGLPEGILLRRPNCFGIAKLKKILQASNNIQFVIKRPELLAEGVKEMASDSPGAKAAAERDCSDTLLDDAVKRQGFQENYDARLSRIDIANTLREQVQDLFNKKYGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIKFTVTRPFQGLIPKPDEDDANRLGEKVILREQVKELFNEKYGEALGLNRPIMVPYKLIRDSPDAVEVTGLPDDIPFRNPNTYDIHRLEKILKARESIRMVIINQLQPFSEICTEAKQTEKDSSVPKRKRKRISEGNSVSSSSSSSSSSSSNMESTSSTNQISLVQWPMNMYMLDYGGLNVQIPGPINY
SIO_010081: GTF2IRD1
subclass of: SO_0000673
so part of: GTF2IRD1
location: complement(join(3295457..3295531,3296185..3296321,3297260..3297297,3297657..3297849,3299149..3299226,3306833..3306861,3307490..3307673,3308465..3308548,3309487..3309552,3309751..3309809,3310717..3310900,3311964..3312029,3312509..3312568,3312934..3313023,3314636..3314716,3315394..3315431,3318382..3318502,3320835..3320860,3321764..3321947,3322697..3322780,3323575..3323664,3324154..3324464,3325626..3325809,3329447..3329593,3332512..3332653,3334509..3334631))
location: region:3295457-3334631:-1
so has part: feature:3334509-3334631:-1:exon
so has part: feature:3332512-3332653:-1:exon
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so has part: feature:3297260-3297297:-1:exon
so has part: feature:3296185-3296321:-1:exon
so has part: feature:3295457-3295531:-1:exon

XP_032057007.1
type: Protein
SIO_000068: ncbiprotein

position:3295457:-1
position: 3295457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3334631:-1
position: 3334631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3334509-3334631:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3332512-3332653:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3329447-3329593:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3325626-3325809:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3324154-3324464:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3323575-3323664:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3322697-3322780:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3321764-3321947:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3320835-3320860:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3318382-3318502:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3315394-3315431:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3314636-3314716:-1:exon

urn:…
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SIO_000628: feature:3312934-3313023:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3312509-3312568:-1:exon

urn:…
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SIO_000628: feature:3311964-3312029:-1:exon

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SIO_000300: 17
SIO_000628: feature:3309751-3309809:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3309487-3309552:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3308465-3308548:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3307490-3307673:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3306833-3306861:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3299149-3299226:-1:exon

urn:…
SIO_000300: 23
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urn:…
SIO_000300: 24
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urn:…
SIO_000300: 25
SIO_000628: feature:3296185-3296321:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3295457-3295531:-1:exon

GTF2IRD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: GTF2IRD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor II-I repeat domain-containing protein 1 isoform X2
translation: MALAGKPLDVTLSSSRPEQWNMVFPQKDEIITSLVSALDSMCSALSKLNAEVACIAVHDESTFVVGTEKGRVFLSARKELQADFQKFCRVQQRREQEAEAQKKAKECGRSMLRVSPDQGSDVYLLRKMVEEVFDVLYSEAVGKSSVVPLPYERFLKEPGLLAVAGLPEGISFKKPMEYDVKSLMAILEHSHSIRFRLKRPADEPSREPNPSVDLTCTSLAPKGSRDAGANGHMAKASGQDAPSAVAVTNFLYGVSLPTQIAVDLKQEVSSGLHGATAASEALLPRPSGELKVPSSQEYSDCCGQKSAVSGGPLIQNVHSSKRILFSIVHDKTDKWDSFIKETEDINTLRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIIGIPDKIPFKRPCTYGVPKLKRILEERHNIHFVIKRMFDERIFTGSKFTKDPTKLEPSSPPGEISPEPHRGAVLDLAGTSQAGSRSEKCSVSESCEPGTSGELGGIRQIKIEPDELDIIQITVPDRSPTSDEMHDPVTTHMASEESSYILDAVAGTEKGPGEESRHEEKQMEGSDGIGDVLSHLRKQVEILFNTRYAKAIGISEPVKVPYSKFLMYPEDLFVVGLPEGILLRRPNCFGIAKLKKILQASNNIQFVIKRPELLAEGVKEMASDSPGAKAAAERDCSDTLLDDAVKRQGFQENYDARLSRIDIANTLREQVQDLFNKKYGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIKFTVTRPFQGLIPKPAPRRITSLEKAYAALNDEDDANRLGEKVILREQVKELFNEKYGEALGLNRPIMVPYKLIRDSPDAVEVTGLPDDIPFRNPNTYDIHRLEKILKARESIRMVIINQLQPFSEICTEAKQTEKDSSVPKRKRKRISEGNSVSSSSSSSSSSSSNMESTSSTNQISLVQWPMNMYMLDYGGLNVQIPGPINY
SIO_010081: GTF2IRD1
subclass of: SO_0000673
so part of: GTF2IRD1
location: complement(join(3295457..3295531,3296185..3296321,3297260..3297297,3297657..3297849,3299149..3299226,3302350..3302397,3306833..3306861,3307490..3307673,3308465..3308548,3309487..3309552,3309751..3309809,3310717..3310900,3311964..3312029,3312509..3312568,3312934..3313023,3314636..3314716,3315394..3315431,3318382..3318502,3320835..3320860,3321764..3321947,3322697..3322780,3323575..3323664,3324154..3324464,3325626..3325809,3329447..3329593,3332512..3332653,3334509..3334631))
location: region:3295457-3334631:-1
so has part: feature:3334509-3334631:-1:exon
so has part: feature:3332512-3332653:-1:exon
so has part: feature:3329447-3329593:-1:exon
so has part: feature:3325626-3325809:-1:exon
so has part: feature:3324154-3324464:-1:exon
so has part: feature:3323575-3323664:-1:exon
so has part: feature:3322697-3322780:-1:exon
so has part: feature:3321764-3321947:-1:exon
so has part: feature:3320835-3320860:-1:exon
so has part: feature:3318382-3318502:-1:exon
so has part: feature:3315394-3315431:-1:exon
so has part: feature:3314636-3314716:-1:exon
so has part: feature:3312934-3313023:-1:exon
so has part: feature:3312509-3312568:-1:exon
so has part: feature:3311964-3312029:-1:exon
so has part: feature:3310717-3310900:-1:exon
so has part: feature:3309751-3309809:-1:exon
so has part: feature:3309487-3309552:-1:exon
so has part: feature:3308465-3308548:-1:exon
so has part: feature:3307490-3307673:-1:exon
so has part: feature:3306833-3306861:-1:exon
so has part: feature:3302350-3302397:-1:exon
so has part: feature:3299149-3299226:-1:exon
so has part: feature:3297657-3297849:-1:exon
so has part: feature:3297260-3297297:-1:exon
so has part: feature:3296185-3296321:-1:exon
so has part: feature:3295457-3295531:-1:exon

XP_032057004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3334509-3334631:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3332512-3332653:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3329447-3329593:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3325626-3325809:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3324154-3324464:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3323575-3323664:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3322697-3322780:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3321764-3321947:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3320835-3320860:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3318382-3318502:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3315394-3315431:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3314636-3314716:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3312934-3313023:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3312509-3312568:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3311964-3312029:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3310717-3310900:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3309751-3309809:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3309487-3309552:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3308465-3308548:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3307490-3307673:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3306833-3306861:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3302350-3302397:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3299149-3299226:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3297657-3297849:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3297260-3297297:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3296185-3296321:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3295457-3295531:-1:exon

GTF2IRD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: GTF2IRD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor II-I repeat domain-containing protein 1 isoform X4
translation: MALAGKPLDVTLSSSRPEQWNMVFPQKDEIITSLVSALDSMCSALSKLNAEVACIAVHDESTFVVGTEKGRVFLSARKELQADFQKFCRVQQRREQEAEAQKKAKECGRSMLRVSPDQGSDVYLLRKMVEEVFDVLYSEAVGKSSVVPLPYERFLKEPGLLAVAGLPEGISFKKPMEYDVKSLMAILEHSHSIRFRLKRPADEPSREPNPSVDLTCTSLAPKGSRDAGANGHMAKASGQDAPSAVAVTNFLYGVSLPTQIAVDLKQEVSSGLHGATAASEALLPRPSGELKVPSSQEYSDCCGQKSAVSGGPLIQNVHSSKRILFSIVHDKTDKWDSFIKETEDINTLRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIIGIPDKIPFKRPCTYGVPKLKRILEERHNIHFVIKRMFDERIFTGSKFTKDPTKLEPSSPPGEISPEPHRGAVLDLAGTSQAGSRSEKCSVSESCEPGTSGELGGIRQIKIEPDELDIIQITVPDRSPTSDEMHDPVTTHMASEESSYILDAVAAGTEKGPGEESRHEEKQMEGSDGIGDVLSHLRKQVEILFNTRYAKAIGISEPVKVPYSKFLMYPEDLFVVGLPEGILLRRPNCFGIAKLKKILQASNNIQFVIKRPELLAEGVKEMASDSPGAKENYDARLSRIDIANTLREQVQDLFNKKYGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIKFTVTRPFQGLIPKPAPRRITSLEKAYAALNDEDDANRLGEKVILREQVKELFNEKYGEALGLNRPIMVPYKLIRDSPDAVEVTGLPDDIPFRNPNTYDIHRLEKILKARESIRMVIINQLQPFSEICTEAKQTEKDSSVPKRKRKRISEGNSVSSSSSSSSSSSSNMESTSSTNQISLVQWPMNMYMLDYGGLNVQIPGPINY
SIO_010081: GTF2IRD1
subclass of: SO_0000673
so part of: GTF2IRD1
location: complement(join(3295457..3295531,3296185..3296321,3297260..3297297,3297657..3297849,3299149..3299226,3302350..3302397,3306833..3306861,3307490..3307673,3308465..3308548,3309751..3309809,3310717..3310900,3311964..3312029,3312509..3312571,3312934..3313023,3314636..3314716,3315394..3315431,3318382..3318502,3320835..3320860,3321764..3321947,3322697..3322780,3323575..3323664,3324154..3324464,3325626..3325809,3329447..3329593,3332512..3332653,3334509..3334631))
location: region:3295457-3334631:-1
so has part: feature:3334509-3334631:-1:exon
so has part: feature:3332512-3332653:-1:exon
so has part: feature:3329447-3329593:-1:exon
so has part: feature:3325626-3325809:-1:exon
so has part: feature:3324154-3324464:-1:exon
so has part: feature:3323575-3323664:-1:exon
so has part: feature:3322697-3322780:-1:exon
so has part: feature:3321764-3321947:-1:exon
so has part: feature:3320835-3320860:-1:exon
so has part: feature:3318382-3318502:-1:exon
so has part: feature:3315394-3315431:-1:exon
so has part: feature:3314636-3314716:-1:exon
so has part: feature:3312934-3313023:-1:exon
so has part: feature:3312509-3312571:-1:exon
so has part: feature:3311964-3312029:-1:exon
so has part: feature:3310717-3310900:-1:exon
so has part: feature:3309751-3309809:-1:exon
so has part: feature:3308465-3308548:-1:exon
so has part: feature:3307490-3307673:-1:exon
so has part: feature:3306833-3306861:-1:exon
so has part: feature:3302350-3302397:-1:exon
so has part: feature:3299149-3299226:-1:exon
so has part: feature:3297657-3297849:-1:exon
so has part: feature:3297260-3297297:-1:exon
so has part: feature:3296185-3296321:-1:exon
so has part: feature:3295457-3295531:-1:exon

XP_032057006.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3334509-3334631:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3332512-3332653:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3329447-3329593:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3325626-3325809:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3324154-3324464:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3323575-3323664:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3322697-3322780:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3321764-3321947:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3320835-3320860:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3318382-3318502:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3315394-3315431:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3314636-3314716:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3312934-3313023:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3312509-3312571:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3311964-3312029:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3310717-3310900:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3309751-3309809:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3308465-3308548:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3307490-3307673:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3306833-3306861:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3302350-3302397:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3299149-3299226:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3297657-3297849:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3297260-3297297:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3296185-3296321:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3295457-3295531:-1:exon

GTF2IRD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: GTF2IRD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor II-I repeat domain-containing protein 1 isoform X3
translation: MALAGKPLDVTLSSSRPEQWNMVFPQKDEIITSLVSALDSMCSALSKLNAEVACIAVHDESTFVVGTEKGRVFLSARKELQADFQKFCRVQQRREQEAEAQKKAKECGRSMLRVSPDQGSDVYLLRKMVEEVFDVLYSEAVGKSSVVPLPYERFLKEPGLLAVAGLPEGISFKKPMEYDVKSLMAILEHSHSIRFRLKRPADEPSREPNPSVDLTCTSLAPKGSRDAGANGHMAKASGQDAPSAVAVTNFLYGVSLPTQIAVDLKQEVSSGLHGATAASEALLPRPSGELKVPSSQEYSDCCGQKSAVSGGPLIQNVHSSKRILFSIVHDKTDKWDSFIKETEDINTLRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIIGIPDKIPFKRPCTYGVPKLKRILEERHNIHFVIKRMFDERIFTGSKFTKDPTKLEPSSPPGEISPEPHRGAVLDLAGTSQAGSRSEKCSVSESCEPGTSGELGGIRQIKIEPDELDIIQITVPDRSPTSDEMHDPVTTHMASEESSYILDAVAAGTEKGPGEESRHEEKQMEGSDGIGDVLSHLRKQVEILFNTRYAKAIGISEPVKVPYSKFLMYPEDLFVVGLPEGILLRRPNCFGIAKLKKILQASNNIQFVIKRPELLAEGVKEMASDSPGAKAAAERDCSDTLLDDAVKRQGFQENYDARLSRIDIANTLREQVQDLFNKKYGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIKFTVTRPFQGLIPKPDEDDANRLGEKVILREQVKELFNEKYGEALGLNRPIMVPYKLIRDSPDAVEVTGLPDDIPFRNPNTYDIHRLEKILKARESIRMVIINQLQPFSEICTEAKQTEKDSSVPKRKRKRISEGNSVSSSSSSSSSSSSNMESTSSTNQISLVQWPMNMYMLDYGGLNVQIPGPINY
SIO_010081: GTF2IRD1
subclass of: SO_0000673
so part of: GTF2IRD1
location: complement(join(3295457..3295531,3296185..3296321,3297260..3297297,3297657..3297849,3299149..3299226,3306833..3306861,3307490..3307673,3308465..3308548,3309487..3309552,3309751..3309809,3310717..3310900,3311964..3312029,3312509..3312571,3312934..3313023,3314636..3314716,3315394..3315431,3318382..3318502,3320835..3320860,3321764..3321947,3322697..3322780,3323575..3323664,3324154..3324464,3325626..3325809,3329447..3329593,3332512..3332653,3334509..3334631))
location: region:3295457-3334631:-1
so has part: feature:3334509-3334631:-1:exon
so has part: feature:3332512-3332653:-1:exon
so has part: feature:3329447-3329593:-1:exon
so has part: feature:3325626-3325809:-1:exon
so has part: feature:3324154-3324464:-1:exon
so has part: feature:3323575-3323664:-1:exon
so has part: feature:3322697-3322780:-1:exon
so has part: feature:3321764-3321947:-1:exon
so has part: feature:3320835-3320860:-1:exon
so has part: feature:3318382-3318502:-1:exon
so has part: feature:3315394-3315431:-1:exon
so has part: feature:3314636-3314716:-1:exon
so has part: feature:3312934-3313023:-1:exon
so has part: feature:3312509-3312571:-1:exon
so has part: feature:3311964-3312029:-1:exon
so has part: feature:3310717-3310900:-1:exon
so has part: feature:3309751-3309809:-1:exon
so has part: feature:3309487-3309552:-1:exon
so has part: feature:3308465-3308548:-1:exon
so has part: feature:3307490-3307673:-1:exon
so has part: feature:3306833-3306861:-1:exon
so has part: feature:3299149-3299226:-1:exon
so has part: feature:3297657-3297849:-1:exon
so has part: feature:3297260-3297297:-1:exon
so has part: feature:3296185-3296321:-1:exon
so has part: feature:3295457-3295531:-1:exon

XP_032057005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3334509-3334631:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3332512-3332653:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3329447-3329593:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3325626-3325809:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3324154-3324464:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3323575-3323664:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3322697-3322780:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3321764-3321947:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3320835-3320860:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3318382-3318502:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3315394-3315431:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3314636-3314716:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3312934-3313023:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3312509-3312571:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3311964-3312029:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3310717-3310900:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3309751-3309809:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3309487-3309552:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3308465-3308548:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3307490-3307673:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3306833-3306861:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3299149-3299226:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3297657-3297849:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3297260-3297297:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3296185-3296321:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3295457-3295531:-1:exon

GTF2IRD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: GTF2IRD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor II-I repeat domain-containing protein 1 isoform X1
translation: MALAGKPLDVTLSSSRPEQWNMVFPQKDEIITSLVSALDSMCSALSKLNAEVACIAVHDESTFVVGTEKGRVFLSARKELQADFQKFCRVQQRREQEAEAQKKAKECGRSMLRVSPDQGSDVYLLRKMVEEVFDVLYSEAVGKSSVVPLPYERFLKEPGLLAVAGLPEGISFKKPMEYDVKSLMAILEHSHSIRFRLKRPADEPSREPNPSVDLTCTSLAPKGSRDAGANGHMAKASGQDAPSAVAVTNFLYGVSLPTQIAVDLKQEVSSGLHGATAASEALLPRPSGELKVPSSQEYSDCCGQKSAVSGGPLIQNVHSSKRILFSIVHDKTDKWDSFIKETEDINTLRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIIGIPDKIPFKRPCTYGVPKLKRILEERHNIHFVIKRMFDERIFTGSKFTKDPTKLEPSSPPGEISPEPHRGAVLDLAGTSQAGSRSEKCSVSESCEPGTSGELGGIRQIKIEPDELDIIQITVPDRSPTSDEMHDPVTTHMASEESSYILDAVAAGTEKGPGEESRHEEKQMEGSDGIGDVLSHLRKQVEILFNTRYAKAIGISEPVKVPYSKFLMYPEDLFVVGLPEGILLRRPNCFGIAKLKKILQASNNIQFVIKRPELLAEGVKEMASDSPGAKAAAERDCSDTLLDDAVKRQGFQENYDARLSRIDIANTLREQVQDLFNKKYGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIKFTVTRPFQGLIPKPAPRRITSLEKAYAALNDEDDANRLGEKVILREQVKELFNEKYGEALGLNRPIMVPYKLIRDSPDAVEVTGLPDDIPFRNPNTYDIHRLEKILKARESIRMVIINQLQPFSEICTEAKQTEKDSSVPKRKRKRISEGNSVSSSSSSSSSSSSNMESTSSTNQISLVQWPMNMYMLDYGGLNVQIPGPINY
SIO_010081: GTF2IRD1
subclass of: SO_0000673
so part of: GTF2IRD1
location: complement(join(3295457..3295531,3296185..3296321,3297260..3297297,3297657..3297849,3299149..3299226,3302350..3302397,3306833..3306861,3307490..3307673,3308465..3308548,3309487..3309552,3309751..3309809,3310717..3310900,3311964..3312029,3312509..3312571,3312934..3313023,3314636..3314716,3315394..3315431,3318382..3318502,3320835..3320860,3321764..3321947,3322697..3322780,3323575..3323664,3324154..3324464,3325626..3325809,3329447..3329593,3332512..3332653,3334509..3334631))
location: region:3295457-3334631:-1
so has part: feature:3334509-3334631:-1:exon
so has part: feature:3332512-3332653:-1:exon
so has part: feature:3329447-3329593:-1:exon
so has part: feature:3325626-3325809:-1:exon
so has part: feature:3324154-3324464:-1:exon
so has part: feature:3323575-3323664:-1:exon
so has part: feature:3322697-3322780:-1:exon
so has part: feature:3321764-3321947:-1:exon
so has part: feature:3320835-3320860:-1:exon
so has part: feature:3318382-3318502:-1:exon
so has part: feature:3315394-3315431:-1:exon
so has part: feature:3314636-3314716:-1:exon
so has part: feature:3312934-3313023:-1:exon
so has part: feature:3312509-3312571:-1:exon
so has part: feature:3311964-3312029:-1:exon
so has part: feature:3310717-3310900:-1:exon
so has part: feature:3309751-3309809:-1:exon
so has part: feature:3309487-3309552:-1:exon
so has part: feature:3308465-3308548:-1:exon
so has part: feature:3307490-3307673:-1:exon
so has part: feature:3306833-3306861:-1:exon
so has part: feature:3302350-3302397:-1:exon
so has part: feature:3299149-3299226:-1:exon
so has part: feature:3297657-3297849:-1:exon
so has part: feature:3297260-3297297:-1:exon
so has part: feature:3296185-3296321:-1:exon
so has part: feature:3295457-3295531:-1:exon

XP_032057003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3334509-3334631:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3332512-3332653:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3329447-3329593:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3325626-3325809:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3324154-3324464:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3323575-3323664:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3322697-3322780:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3321764-3321947:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3320835-3320860:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3318382-3318502:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3315394-3315431:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3314636-3314716:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3312934-3313023:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3312509-3312571:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3311964-3312029:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3310717-3310900:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3309751-3309809:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3309487-3309552:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3308465-3308548:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3307490-3307673:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3306833-3306861:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3302350-3302397:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3299149-3299226:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3297657-3297849:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3297260-3297297:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3296185-3296321:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3295457-3295531:-1:exon

CLIP2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: CLIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3359833..3440432)
location: region:3359833-3440432:-1
so has part: feature:3359833-3440432:-1:exon
subclass of: SO_0000010

116497111
type: Gene
SIO_000068: ncbigene

position:3359833:-1
position: 3359833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3440432:-1
position: 3440432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3359833-3440432:-1:exon

CLIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: CLIP2
product: CAP-Gly domain containing linker protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032200640.1
SIO_010081: CLIP2
subclass of: SO_0000673
so part of: CLIP2
location: complement(join(3359833..3363638,3364273..3364335,3368030..3368215,3368804..3368963,3369446..3369602,3370017..3370100,3371590..3371647,3375223..3376167,3377748..3377852,3382166..3382226,3384639..3384742,3385868..3386065,3386975..3387188,3391495..3391619,3400981..3401519,3423991..3424211,3440197..3440432))
location: region:3359833-3440432:-1
so has part: feature:3440197-3440432:-1:exon
so has part: feature:3423991-3424211:-1:exon
so has part: feature:3400981-3401519:-1:exon
so has part: feature:3391495-3391619:-1:exon
so has part: feature:3386975-3387188:-1:exon
so has part: feature:3385868-3386065:-1:exon
so has part: feature:3384639-3384742:-1:exon
so has part: feature:3382166-3382226:-1:exon
so has part: feature:3377748-3377852:-1:exon
so has part: feature:3375223-3376167:-1:exon
so has part: feature:3371590-3371647:-1:exon
so has part: feature:3370017-3370100:-1:exon
so has part: feature:3369446-3369602:-1:exon
so has part: feature:3368804-3368963:-1:exon
so has part: feature:3368030-3368215:-1:exon
so has part: feature:3364273-3364335:-1:exon
so has part: feature:3359833-3363638:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3440197-3440432:-1:exon

position:3440197:-1
position: 3440197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3423991-3424211:-1:exon

position:3423991:-1
position: 3423991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3424211:-1
position: 3424211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3400981-3401519:-1:exon

position:3400981:-1
position: 3400981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3401519:-1
position: 3401519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3391495-3391619:-1:exon

position:3391495:-1
position: 3391495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3391619:-1
position: 3391619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3386975-3387188:-1:exon

position:3386975:-1
position: 3386975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3387188:-1
position: 3387188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3385868-3386065:-1:exon

position:3385868:-1
position: 3385868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3386065:-1
position: 3386065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3384639-3384742:-1:exon

position:3384639:-1
position: 3384639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3384742:-1
position: 3384742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3382166-3382226:-1:exon

position:3382166:-1
position: 3382166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3382226:-1
position: 3382226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3377748-3377852:-1:exon

position:3377748:-1
position: 3377748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3377852:-1
position: 3377852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3375223-3376167:-1:exon

position:3375223:-1
position: 3375223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3376167:-1
position: 3376167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3371590-3371647:-1:exon

position:3371590:-1
position: 3371590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3371647:-1
position: 3371647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3370017-3370100:-1:exon

position:3370017:-1
position: 3370017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3370100:-1
position: 3370100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3369446-3369602:-1:exon

position:3369446:-1
position: 3369446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3369602:-1
position: 3369602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3368804-3368963:-1:exon

position:3368804:-1
position: 3368804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3368963:-1
position: 3368963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3368030-3368215:-1:exon

position:3368030:-1
position: 3368030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3368215:-1
position: 3368215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3364273-3364335:-1:exon

position:3364273:-1
position: 3364273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3364335:-1
position: 3364335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3359833-3363638:-1:exon

position:3363638:-1
position: 3363638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: CLIP2
product: CAP-Gly domain containing linker protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032200641.1
SIO_010081: CLIP2
subclass of: SO_0000673
so part of: CLIP2
location: complement(join(3359833..3363638,3364273..3364335,3368030..3368215,3368804..3368963,3369446..3369602,3370017..3370100,3371590..3371647,3375223..3376167,3382166..3382226,3384639..3384742,3385868..3386065,3386975..3387188,3391495..3391619,3400981..3401519,3423991..3424211,3439747..3439840))
location: region:3359833-3439840:-1
so has part: feature:3439747-3439840:-1:exon
so has part: feature:3423991-3424211:-1:exon
so has part: feature:3400981-3401519:-1:exon
so has part: feature:3391495-3391619:-1:exon
so has part: feature:3386975-3387188:-1:exon
so has part: feature:3385868-3386065:-1:exon
so has part: feature:3384639-3384742:-1:exon
so has part: feature:3382166-3382226:-1:exon
so has part: feature:3375223-3376167:-1:exon
so has part: feature:3371590-3371647:-1:exon
so has part: feature:3370017-3370100:-1:exon
so has part: feature:3369446-3369602:-1:exon
so has part: feature:3368804-3368963:-1:exon
so has part: feature:3368030-3368215:-1:exon
so has part: feature:3364273-3364335:-1:exon
so has part: feature:3359833-3363638:-1:exon

position:3439840:-1
position: 3439840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3439747-3439840:-1:exon

position:3439747:-1
position: 3439747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3423991-3424211:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3400981-3401519:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3391495-3391619:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3386975-3387188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3385868-3386065:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3384639-3384742:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3382166-3382226:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3375223-3376167:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3371590-3371647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3370017-3370100:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3369446-3369602:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3368804-3368963:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3368030-3368215:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3364273-3364335:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3359833-3363638:-1:exon

CLIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: CLIP2
product: CAP-Gly domain containing linker protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032200639.1
SIO_010081: CLIP2
subclass of: SO_0000673
so part of: CLIP2
location: complement(join(3359833..3363638,3364273..3364335,3368030..3368215,3368804..3368963,3369446..3369602,3370017..3370100,3371590..3371647,3375223..3376167,3377748..3377852,3382166..3382226,3384639..3384742,3385868..3386065,3386975..3387188,3391495..3391619,3400981..3401519,3423991..3424211,3439747..3439840))
location: region:3359833-3439840:-1
so has part: feature:3439747-3439840:-1:exon
so has part: feature:3423991-3424211:-1:exon
so has part: feature:3400981-3401519:-1:exon
so has part: feature:3391495-3391619:-1:exon
so has part: feature:3386975-3387188:-1:exon
so has part: feature:3385868-3386065:-1:exon
so has part: feature:3384639-3384742:-1:exon
so has part: feature:3382166-3382226:-1:exon
so has part: feature:3377748-3377852:-1:exon
so has part: feature:3375223-3376167:-1:exon
so has part: feature:3371590-3371647:-1:exon
so has part: feature:3370017-3370100:-1:exon
so has part: feature:3369446-3369602:-1:exon
so has part: feature:3368804-3368963:-1:exon
so has part: feature:3368030-3368215:-1:exon
so has part: feature:3364273-3364335:-1:exon
so has part: feature:3359833-3363638:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3439747-3439840:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3423991-3424211:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3400981-3401519:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3391495-3391619:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3386975-3387188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3385868-3386065:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3384639-3384742:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3382166-3382226:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3377748-3377852:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3375223-3376167:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3371590-3371647:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3370017-3370100:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3369446-3369602:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3368804-3368963:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3368030-3368215:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3364273-3364335:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3359833-3363638:-1:exon

CLIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: CLIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CAP-Gly domain-containing linker protein 2 isoform X2
translation: MLKPSGLKIPGRAGKHSSPVGRASGTTAAAVTTGSKEGSPLHKQGTTSTASAEKSGSKVAEVGDDFLGDFVVGERVWVNGVKPGVIQYLGETQFAPGQWAGVVLDDPVGKNDGSVGGVRYFECQPLQGIFTRPSKLTRQPVAEGSGSDAPSVDSLTAQNLSLHSGTATPPLSTRVIPLRESVLNSAMKTGNESGSNLSDSGSVKKGEKDLRLGDRVLVGGTKTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPPKFGLFAPIHKVIRIGFPSTSPAKAKKSKRMAMGVSALTHSPSSSSISSVSSVASSVGGRPSRSGLLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHICEVEKEIAIMKAQHEQYVTEAEGNLQRARALVDGMQKEKIELLNQLEEEKRKVEDLQFRVEEESITKGDLELTTVAEKSRILQLEEELSLRRSEVDELRQCLRSSHQAEAPEHHLGLQSEALRLRDQLLSANKEHQKESSQLKEKYEKTLKKYQQEMEKLKAVNEKYSQEIVDLKHKVQQATNENMGLMDNWKSKLDTLASDHQKSLEDLKATLNTGPDTQHKEIVELKAVVESIKMEHQLELENLKAKHDIETAVHIKEKESLKLKLQEAVDEVEKSNSDWKMQLETKSNQHLLELQDMKDKCRDAELRVHELEKLHSEYKDQTQAIAFLKEQISLAEKKMLDYETLQKTEAQSKQEIHRLQEKVLVLENKLQSMEALHPSQHANMIETNDISEEKIRMKQTMEDLQDKLSKRDKEVSSLVSQTETLRAQVSALENKCKIAEKKADSVLKEKKRLEGELEALTKKTHDASGQLVLISQELLKKERSLNELRALLLEANRHSPGPERDLSREVHKAEWRLKEQKLKDDIKGLREKLVVLDKEKSVTDQRRYSLIDPSSESEVIRLQHRLVSTEDVLRNALEQGHQMEKLMEAMRLSSEKAQTVGNSGSANGIHQQDKSHKQEEKL
SIO_010081: CLIP2
subclass of: SO_0000673
so part of: CLIP2
location: complement(join(3363627..3363638,3364273..3364335,3368030..3368215,3368804..3368963,3369446..3369602,3370017..3370100,3371590..3371647,3375223..3376167,3382166..3382226,3384639..3384742,3385868..3386065,3386975..3387188,3391495..3391619,3400981..3401519,3423991..3424102))
location: region:3363627-3424102:-1
so has part: feature:3423991-3424102:-1:exon
so has part: feature:3400981-3401519:-1:exon
so has part: feature:3391495-3391619:-1:exon
so has part: feature:3386975-3387188:-1:exon
so has part: feature:3385868-3386065:-1:exon
so has part: feature:3384639-3384742:-1:exon
so has part: feature:3382166-3382226:-1:exon
so has part: feature:3375223-3376167:-1:exon
so has part: feature:3371590-3371647:-1:exon
so has part: feature:3370017-3370100:-1:exon
so has part: feature:3369446-3369602:-1:exon
so has part: feature:3368804-3368963:-1:exon
so has part: feature:3368030-3368215:-1:exon
so has part: feature:3364273-3364335:-1:exon
so has part: feature:3363627-3363638:-1:exon

XP_032056532.1
type: Protein
SIO_000068: ncbiprotein

position:3363627:-1
position: 3363627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3424102:-1
position: 3424102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3423991-3424102:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3400981-3401519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3391495-3391619:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3386975-3387188:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3385868-3386065:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3384639-3384742:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3382166-3382226:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3375223-3376167:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3371590-3371647:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3370017-3370100:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3369446-3369602:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3368804-3368963:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3368030-3368215:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3364273-3364335:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3363627-3363638:-1:exon

CLIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: CLIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CAP-Gly domain-containing linker protein 2 isoform X1
translation: MLKPSGLKIPGRAGKHSSPVGRASGTTAAAVTTGSKEGSPLHKQGTTSTASAEKSGSKVAEVGDDFLGDFVVGERVWVNGVKPGVIQYLGETQFAPGQWAGVVLDDPVGKNDGSVGGVRYFECQPLQGIFTRPSKLTRQPVAEGSGSDAPSVDSLTAQNLSLHSGTATPPLSTRVIPLRESVLNSAMKTGNESGSNLSDSGSVKKGEKDLRLGDRVLVGGTKTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPPKFGLFAPIHKVIRIGFPSTSPAKAKKSKRMAMGVSALTHSPSSSSISSVSSVASSVGGRPSRSGLLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHICEVEKEIAIMKAQHEQYVTEAEGNLQRARALVDGMQKEKIELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTQLEHARIRELEQSLLFEKAQAEKLLRELEDTRLTTVAEKSRILQLEEELSLRRSEVDELRQCLRSSHQAEAPEHHLGLQSEALRLRDQLLSANKEHQKESSQLKEKYEKTLKKYQQEMEKLKAVNEKYSQEIVDLKHKVQQATNENMGLMDNWKSKLDTLASDHQKSLEDLKATLNTGPDTQHKEIVELKAVVESIKMEHQLELENLKAKHDIETAVHIKEKESLKLKLQEAVDEVEKSNSDWKMQLETKSNQHLLELQDMKDKCRDAELRVHELEKLHSEYKDQTQAIAFLKEQISLAEKKMLDYETLQKTEAQSKQEIHRLQEKVLVLENKLQSMEALHPSQHANMIETNDISEEKIRMKQTMEDLQDKLSKRDKEVSSLVSQTETLRAQVSALENKCKIAEKKADSVLKEKKRLEGELEALTKKTHDASGQLVLISQELLKKERSLNELRALLLEANRHSPGPERDLSREVHKAEWRLKEQKLKDDIKGLREKLVVLDKEKSVTDQRRYSLIDPSSESEVIRLQHRLVSTEDVLRNALEQGHQMEKLMEAMRLSSEKAQTVGNSGSANGIHQQDKSHKQEEKL
SIO_010081: CLIP2
subclass of: SO_0000673
so part of: CLIP2
location: complement(join(3363627..3363638,3364273..3364335,3368030..3368215,3368804..3368963,3369446..3369602,3370017..3370100,3371590..3371647,3375223..3376167,3377748..3377852,3382166..3382226,3384639..3384742,3385868..3386065,3386975..3387188,3391495..3391619,3400981..3401519,3423991..3424102))
location: region:3363627-3424102:-1
so has part: feature:3423991-3424102:-1:exon
so has part: feature:3400981-3401519:-1:exon
so has part: feature:3391495-3391619:-1:exon
so has part: feature:3386975-3387188:-1:exon
so has part: feature:3385868-3386065:-1:exon
so has part: feature:3384639-3384742:-1:exon
so has part: feature:3382166-3382226:-1:exon
so has part: feature:3377748-3377852:-1:exon
so has part: feature:3375223-3376167:-1:exon
so has part: feature:3371590-3371647:-1:exon
so has part: feature:3370017-3370100:-1:exon
so has part: feature:3369446-3369602:-1:exon
so has part: feature:3368804-3368963:-1:exon
so has part: feature:3368030-3368215:-1:exon
so has part: feature:3364273-3364335:-1:exon
so has part: feature:3363627-3363638:-1:exon

XP_032056530.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3423991-3424102:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3400981-3401519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3391495-3391619:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3386975-3387188:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3385868-3386065:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3384639-3384742:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3382166-3382226:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3377748-3377852:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3375223-3376167:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3371590-3371647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3370017-3370100:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3369446-3369602:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3368804-3368963:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3368030-3368215:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3364273-3364335:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3363627-3363638:-1:exon

CLIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: CLIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CAP-Gly domain-containing linker protein 2 isoform X1
translation: MLKPSGLKIPGRAGKHSSPVGRASGTTAAAVTTGSKEGSPLHKQGTTSTASAEKSGSKVAEVGDDFLGDFVVGERVWVNGVKPGVIQYLGETQFAPGQWAGVVLDDPVGKNDGSVGGVRYFECQPLQGIFTRPSKLTRQPVAEGSGSDAPSVDSLTAQNLSLHSGTATPPLSTRVIPLRESVLNSAMKTGNESGSNLSDSGSVKKGEKDLRLGDRVLVGGTKTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPPKFGLFAPIHKVIRIGFPSTSPAKAKKSKRMAMGVSALTHSPSSSSISSVSSVASSVGGRPSRSGLLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHICEVEKEIAIMKAQHEQYVTEAEGNLQRARALVDGMQKEKIELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTQLEHARIRELEQSLLFEKAQAEKLLRELEDTRLTTVAEKSRILQLEEELSLRRSEVDELRQCLRSSHQAEAPEHHLGLQSEALRLRDQLLSANKEHQKESSQLKEKYEKTLKKYQQEMEKLKAVNEKYSQEIVDLKHKVQQATNENMGLMDNWKSKLDTLASDHQKSLEDLKATLNTGPDTQHKEIVELKAVVESIKMEHQLELENLKAKHDIETAVHIKEKESLKLKLQEAVDEVEKSNSDWKMQLETKSNQHLLELQDMKDKCRDAELRVHELEKLHSEYKDQTQAIAFLKEQISLAEKKMLDYETLQKTEAQSKQEIHRLQEKVLVLENKLQSMEALHPSQHANMIETNDISEEKIRMKQTMEDLQDKLSKRDKEVSSLVSQTETLRAQVSALENKCKIAEKKADSVLKEKKRLEGELEALTKKTHDASGQLVLISQELLKKERSLNELRALLLEANRHSPGPERDLSREVHKAEWRLKEQKLKDDIKGLREKLVVLDKEKSVTDQRRYSLIDPSSESEVIRLQHRLVSTEDVLRNALEQGHQMEKLMEAMRLSSEKAQTVGNSGSANGIHQQDKSHKQEEKL
SIO_010081: CLIP2
subclass of: SO_0000673
so part of: CLIP2
location: complement(join(3363627..3363638,3364273..3364335,3368030..3368215,3368804..3368963,3369446..3369602,3370017..3370100,3371590..3371647,3375223..3376167,3377748..3377852,3382166..3382226,3384639..3384742,3385868..3386065,3386975..3387188,3391495..3391619,3400981..3401519,3423991..3424102))
location: region:3363627-3424102:-1
so has part: feature:3423991-3424102:-1:exon
so has part: feature:3400981-3401519:-1:exon
so has part: feature:3391495-3391619:-1:exon
so has part: feature:3386975-3387188:-1:exon
so has part: feature:3385868-3386065:-1:exon
so has part: feature:3384639-3384742:-1:exon
so has part: feature:3382166-3382226:-1:exon
so has part: feature:3377748-3377852:-1:exon
so has part: feature:3375223-3376167:-1:exon
so has part: feature:3371590-3371647:-1:exon
so has part: feature:3370017-3370100:-1:exon
so has part: feature:3369446-3369602:-1:exon
so has part: feature:3368804-3368963:-1:exon
so has part: feature:3368030-3368215:-1:exon
so has part: feature:3364273-3364335:-1:exon
so has part: feature:3363627-3363638:-1:exon

XP_032056531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3423991-3424102:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3400981-3401519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3391495-3391619:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3386975-3387188:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3385868-3386065:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3384639-3384742:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3382166-3382226:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3377748-3377852:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3375223-3376167:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3371590-3371647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3370017-3370100:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3369446-3369602:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3368804-3368963:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3368030-3368215:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3364273-3364335:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3363627-3363638:-1:exon

RFC2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: RFC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3462546..3469354
location: region:3462546-3469354:1
so has part: feature:3462546-3469354:1:exon
subclass of: SO_0000010

116497439
type: Gene
SIO_000068: ncbigene