Aythya fuligula isolate bAytFul2 chromosome 16, bAytFul2.pri, whole genome shotgun sequence.
type: Entry
definition: Aythya fuligula isolate bAytFul2 chromosome 16, bAytFul2.pri, whole genome shotgun sequence.
sequence version: NC_045574.1
sequence date: 2020-01-30
sequence: sequence
division: CON
label: NC_045574.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA602521
dblink: SAMN12621346
keyword: WGS
keyword: RefSeq
source: Aythya fuligula (tufted duck)
organism: Aythya fuligula
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Aythyinae; Aythya.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020315.1.\nAssembly name: bAytFul2.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/12/31. The original whole-genome shotgun project has the\naccession WNMM00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 20-SEP-2019\nAssembly Method :: FALCON v. 2018.31.08-03.06; FALCON-Unzip\n v. 6.0.0.47841; purge_haplotigs v.\n v1.0.3+ 1.Nov.2018; scaff10x v. 4.1.0;\n Bionano Solve DLS v. 3.2.1; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishing\n & gap filling v. 6.0.0.47841; longranger\n align v. 2.2.2; freebayes Illumina\n polishing v. 1.3; gEVAL manual curation\n v. 2019-09-20; VGP assembly pipeline\n individual v. 1.5\nAssembly Name :: bAytFul2.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 64.03x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Aythya fuligula Annotation Release\n 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 16262610
topology: linear
so has quality: SO_0000987
location: 1..16262610
location: region:1-16262610:1
RO_0002162: 219594

NC_045574
type: RefSeq
SIO_000068: refseq

PRJNA602521
type: BioProject
SIO_000068: bioproject

SAMN12621346
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16262610:1
position: 16262610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16262610:1:source
so part of: sequence
organism: Aythya fuligula
mol type: genomic DNA
isolate: bAytFul2
chromosome: 16
sex: female
tissue type: lung (powdered)
dev stage: adult
country: Sweden
lat lon: 59.8509 N 17.6300 E
collection date: 28-Aug-2017
collected by: Patrik Ellstrom, Mahmoud Naguib, Josef Jarhult

219594
type: Taxonomy
SIO_000068: taxonomy

ITCH
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: ITCH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 47191..110736
location: region:47191-110736:1
so has part: feature:47191-110736:1:exon
subclass of: SO_0000010

116495622
type: Gene
SIO_000068: ncbigene

position:47191:1
position: 47191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110736:1
position: 110736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47191-110736:1:exon

ITCH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ITCH
product: itchy E3 ubiquitin protein ligase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198258.1
SIO_010081: ITCH
subclass of: SO_0000673
so part of: ITCH
location: join(47191..47258,74343..74433,76999..77137,78699..78823,78952..79089,81510..81552,84543..84712,85935..86169,87435..87530,89126..89300,90314..90380,92306..92390,93839..93967,96745..96817,97773..97844,99727..99815,100452..100611,101329..101462,103971..104111,105919..106039,106737..106841,107060..107156,107669..107741,108392..110736)
location: region:47191-110736:1
so has part: feature:47191-47258:1:exon
so has part: feature:74343-74433:1:exon
so has part: feature:76999-77137:1:exon
so has part: feature:78699-78823:1:exon
so has part: feature:78952-79089:1:exon
so has part: feature:81510-81552:1:exon
so has part: feature:84543-84712:1:exon
so has part: feature:85935-86169:1:exon
so has part: feature:87435-87530:1:exon
so has part: feature:89126-89300:1:exon
so has part: feature:90314-90380:1:exon
so has part: feature:92306-92390:1:exon
so has part: feature:93839-93967:1:exon
so has part: feature:96745-96817:1:exon
so has part: feature:97773-97844:1:exon
so has part: feature:99727-99815:1:exon
so has part: feature:100452-100611:1:exon
so has part: feature:101329-101462:1:exon
so has part: feature:103971-104111:1:exon
so has part: feature:105919-106039:1:exon
so has part: feature:106737-106841:1:exon
so has part: feature:107060-107156:1:exon
so has part: feature:107669-107741:1:exon
so has part: feature:108392-110736:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47191-47258:1:exon

position:47258:1
position: 47258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:74343-74433:1:exon

position:74343:1
position: 74343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74433:1
position: 74433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:76999-77137:1:exon

position:76999:1
position: 76999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77137:1
position: 77137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:78699-78823:1:exon

position:78699:1
position: 78699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78823:1
position: 78823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:78952-79089:1:exon

position:78952:1
position: 78952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79089:1
position: 79089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:81510-81552:1:exon

position:81510:1
position: 81510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81552:1
position: 81552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:84543-84712:1:exon

position:84543:1
position: 84543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84712:1
position: 84712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:85935-86169:1:exon

position:85935:1
position: 85935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86169:1
position: 86169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:87435-87530:1:exon

position:87435:1
position: 87435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87530:1
position: 87530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:89126-89300:1:exon

position:89126:1
position: 89126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89300:1
position: 89300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:90314-90380:1:exon

position:90314:1
position: 90314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90380:1
position: 90380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:92306-92390:1:exon

position:92306:1
position: 92306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92390:1
position: 92390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:93839-93967:1:exon

position:93839:1
position: 93839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93967:1
position: 93967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:96745-96817:1:exon

position:96745:1
position: 96745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96817:1
position: 96817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:97773-97844:1:exon

position:97773:1
position: 97773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97844:1
position: 97844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:99727-99815:1:exon

position:99727:1
position: 99727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99815:1
position: 99815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:100452-100611:1:exon

position:100452:1
position: 100452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100611:1
position: 100611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:101329-101462:1:exon

position:101329:1
position: 101329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101462:1
position: 101462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:103971-104111:1:exon

position:103971:1
position: 103971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104111:1
position: 104111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:105919-106039:1:exon

position:105919:1
position: 105919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106039:1
position: 106039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:106737-106841:1:exon

position:106737:1
position: 106737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106841:1
position: 106841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:107060-107156:1:exon

position:107060:1
position: 107060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107156:1
position: 107156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:107669-107741:1:exon

position:107669:1
position: 107669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107741:1
position: 107741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:108392-110736:1:exon

position:108392:1
position: 108392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ITCH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ITCH
product: itchy E3 ubiquitin protein ligase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198259.1
SIO_010081: ITCH
subclass of: SO_0000673
so part of: ITCH
location: join(47191..47258,74343..74433,76999..77137,78699..78823,78952..79089,81510..81552,84543..84712,85968..86169,87435..87530,89126..89300,90314..90380,92306..92390,93839..93967,96745..96817,97773..97844,99727..99815,100452..100611,101329..101462,103971..104111,105919..106039,106737..106841,107060..107156,107669..107741,108392..110736)
location: region:47191-110736:1
so has part: feature:47191-47258:1:exon
so has part: feature:74343-74433:1:exon
so has part: feature:76999-77137:1:exon
so has part: feature:78699-78823:1:exon
so has part: feature:78952-79089:1:exon
so has part: feature:81510-81552:1:exon
so has part: feature:84543-84712:1:exon
so has part: feature:85968-86169:1:exon
so has part: feature:87435-87530:1:exon
so has part: feature:89126-89300:1:exon
so has part: feature:90314-90380:1:exon
so has part: feature:92306-92390:1:exon
so has part: feature:93839-93967:1:exon
so has part: feature:96745-96817:1:exon
so has part: feature:97773-97844:1:exon
so has part: feature:99727-99815:1:exon
so has part: feature:100452-100611:1:exon
so has part: feature:101329-101462:1:exon
so has part: feature:103971-104111:1:exon
so has part: feature:105919-106039:1:exon
so has part: feature:106737-106841:1:exon
so has part: feature:107060-107156:1:exon
so has part: feature:107669-107741:1:exon
so has part: feature:108392-110736:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47191-47258:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:74343-74433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:76999-77137:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78699-78823:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:78952-79089:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:81510-81552:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84543-84712:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85968-86169:1:exon

position:85968:1
position: 85968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:87435-87530:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:89126-89300:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:90314-90380:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:92306-92390:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:93839-93967:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:96745-96817:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:97773-97844:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:99727-99815:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:100452-100611:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:101329-101462:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:103971-104111:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:105919-106039:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:106737-106841:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:107060-107156:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:107669-107741:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:108392-110736:1:exon

ITCH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: ITCH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase Itchy homolog isoform X1
translation: MAGSGSKSGSSSGFSMKSQLQVTVISAKLKEKNKWFGPSPYVEVSVDGQSKKTEKCNNTSSPKWKQHLTVIVTPVSKLTFRVWSHQTLKSDVLLGSAALDIHETLKSNSMKLEQVVVTLHLLGDREPAEVVGDLSVCLDGMQVDPELLTNGDASSTRSPIQNDSSRARSDTWTNSNGLENSDDAAPNENKTVNGSDSPSLTNGSCKPSRPPRPSRPPPPTPRRPTSVVASVNGPSSTSTENDGASAGSLAGPAASTSSEQSPEGATAATTAPATAALTTPPVSRQVQPGNPPAQALTTVSQGPLPPGWEQRVDQHGRIYYVDHVEKRTTWDRPEPLPPSWERRVDNMGRIYYVDHFTRTTTWQRPTLESVRNYEQWQLQRSQLQGAMQQFNQRFIYGNQDFSSMQSKEFDPLGPLPPGWEKRTDSNGRVYFVNHNTRITQWEDPRSQGQLNEKPLPEGWEMRFTVEGIPYFVDHNRRTTTYIDPRTGKSALDNGPQIAYVRDFKAKVHYFRFWCQQLAMPQHIKITVSRKTLFEDSFQQIMSFSSQDLRRRLWVIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESVDPEFYNSLIWVKENDIEECGLEMFFSVDKEILGEIKSHDLKPNGSNILVTEENKEEYIRLVAEWRLSRGVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHTIYRHYTRTSRQILWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFNRLDLPPYKNYEQLKEKLLFAIEETEGFGQE
SIO_010081: ITCH
subclass of: SO_0000673
so part of: ITCH
location: join(74364..74433,76999..77137,78699..78823,78952..79089,81510..81552,84543..84712,85935..86169,87435..87530,89126..89300,90314..90380,92306..92390,93839..93967,96745..96817,97773..97844,99727..99815,100452..100611,101329..101462,103971..104111,105919..106039,106737..106841,107060..107156,107669..107741,108392..108491)
location: region:74364-108491:1
so has part: feature:74364-74433:1:exon
so has part: feature:76999-77137:1:exon
so has part: feature:78699-78823:1:exon
so has part: feature:78952-79089:1:exon
so has part: feature:81510-81552:1:exon
so has part: feature:84543-84712:1:exon
so has part: feature:85935-86169:1:exon
so has part: feature:87435-87530:1:exon
so has part: feature:89126-89300:1:exon
so has part: feature:90314-90380:1:exon
so has part: feature:92306-92390:1:exon
so has part: feature:93839-93967:1:exon
so has part: feature:96745-96817:1:exon
so has part: feature:97773-97844:1:exon
so has part: feature:99727-99815:1:exon
so has part: feature:100452-100611:1:exon
so has part: feature:101329-101462:1:exon
so has part: feature:103971-104111:1:exon
so has part: feature:105919-106039:1:exon
so has part: feature:106737-106841:1:exon
so has part: feature:107060-107156:1:exon
so has part: feature:107669-107741:1:exon
so has part: feature:108392-108491:1:exon

XP_032054149.1
type: Protein
SIO_000068: ncbiprotein

position:74364:1
position: 74364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108491:1
position: 108491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74364-74433:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:76999-77137:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78699-78823:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78952-79089:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81510-81552:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84543-84712:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:85935-86169:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:87435-87530:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:89126-89300:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:90314-90380:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:92306-92390:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:93839-93967:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:96745-96817:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:97773-97844:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:99727-99815:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:100452-100611:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:101329-101462:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:103971-104111:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:105919-106039:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:106737-106841:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:107060-107156:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:107669-107741:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:108392-108491:1:exon

ITCH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: ITCH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase Itchy homolog isoform X2
translation: MAGSGSKSGSSSGFSMKSQLQVTVISAKLKEKNKWFGPSPYVEVSVDGQSKKTEKCNNTSSPKWKQHLTVIVTPVSKLTFRVWSHQTLKSDVLLGSAALDIHETLKSNSMKLEQVVVTLHLLGDREPAEVVGDLSVCLDGMQVDPELLTNGDASSTRSPIQNDSSRARSDTWTNSNGLENSDDAAPNENKTVNGSDSPSLTNGSCKPSRPPRPSRPPPPTPRRPTSVVENDGASAGSLAGPAASTSSEQSPEGATAATTAPATAALTTPPVSRQVQPGNPPAQALTTVSQGPLPPGWEQRVDQHGRIYYVDHVEKRTTWDRPEPLPPSWERRVDNMGRIYYVDHFTRTTTWQRPTLESVRNYEQWQLQRSQLQGAMQQFNQRFIYGNQDFSSMQSKEFDPLGPLPPGWEKRTDSNGRVYFVNHNTRITQWEDPRSQGQLNEKPLPEGWEMRFTVEGIPYFVDHNRRTTTYIDPRTGKSALDNGPQIAYVRDFKAKVHYFRFWCQQLAMPQHIKITVSRKTLFEDSFQQIMSFSSQDLRRRLWVIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESVDPEFYNSLIWVKENDIEECGLEMFFSVDKEILGEIKSHDLKPNGSNILVTEENKEEYIRLVAEWRLSRGVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHTIYRHYTRTSRQILWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFNRLDLPPYKNYEQLKEKLLFAIEETEGFGQE
SIO_010081: ITCH
subclass of: SO_0000673
so part of: ITCH
location: join(74364..74433,76999..77137,78699..78823,78952..79089,81510..81552,84543..84712,85968..86169,87435..87530,89126..89300,90314..90380,92306..92390,93839..93967,96745..96817,97773..97844,99727..99815,100452..100611,101329..101462,103971..104111,105919..106039,106737..106841,107060..107156,107669..107741,108392..108491)
location: region:74364-108491:1
so has part: feature:74364-74433:1:exon
so has part: feature:76999-77137:1:exon
so has part: feature:78699-78823:1:exon
so has part: feature:78952-79089:1:exon
so has part: feature:81510-81552:1:exon
so has part: feature:84543-84712:1:exon
so has part: feature:85968-86169:1:exon
so has part: feature:87435-87530:1:exon
so has part: feature:89126-89300:1:exon
so has part: feature:90314-90380:1:exon
so has part: feature:92306-92390:1:exon
so has part: feature:93839-93967:1:exon
so has part: feature:96745-96817:1:exon
so has part: feature:97773-97844:1:exon
so has part: feature:99727-99815:1:exon
so has part: feature:100452-100611:1:exon
so has part: feature:101329-101462:1:exon
so has part: feature:103971-104111:1:exon
so has part: feature:105919-106039:1:exon
so has part: feature:106737-106841:1:exon
so has part: feature:107060-107156:1:exon
so has part: feature:107669-107741:1:exon
so has part: feature:108392-108491:1:exon

XP_032054150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74364-74433:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:76999-77137:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78699-78823:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78952-79089:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81510-81552:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84543-84712:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:85968-86169:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:87435-87530:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:89126-89300:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:90314-90380:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:92306-92390:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:93839-93967:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:96745-96817:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:97773-97844:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:99727-99815:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:100452-100611:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:101329-101462:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:103971-104111:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:105919-106039:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:106737-106841:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:107060-107156:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:107669-107741:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:108392-108491:1:exon

DYNLRB1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: DYNLRB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 113917..124080
location: region:113917-124080:1
so has part: feature:113917-124080:1:exon
subclass of: SO_0000010

116495640
type: Gene
SIO_000068: ncbigene

position:113917:1
position: 113917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124080:1
position: 124080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113917-124080:1:exon

DYNLRB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: DYNLRB1
product: dynein light chain roadblock-type 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198287.1
SIO_010081: DYNLRB1
subclass of: SO_0000673
so part of: DYNLRB1
location: join(113917..113995,117206..117281,118728..118895,123012..124080)
location: region:113917-124080:1
so has part: feature:113917-113995:1:exon
so has part: feature:117206-117281:1:exon
so has part: feature:118728-118895:1:exon
so has part: feature:123012-124080:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:113917-113995:1:exon

position:113995:1
position: 113995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:117206-117281:1:exon

position:117206:1
position: 117206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117281:1
position: 117281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:118728-118895:1:exon

position:118728:1
position: 118728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118895:1
position: 118895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:123012-124080:1:exon

position:123012:1
position: 123012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DYNLRB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: DYNLRB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein light chain roadblock-type 1
translation: MAEVEETLKRIQSQKGVQGIIVVNSEGIPIKSTMDNSTTIQYAGLMHSFIMKARSTVRDIDPQNDLTFLRIRSKKNEIMVAPDKDYFLIVIQNPTE
SIO_010081: DYNLRB1
subclass of: SO_0000673
so part of: DYNLRB1
location: join(113993..113995,117206..117281,118728..118895,123012..123055)
location: region:113993-123055:1
so has part: feature:113993-113995:1:exon
so has part: feature:117206-117281:1:exon
so has part: feature:118728-118895:1:exon
so has part: feature:123012-123055:1:exon

XP_032054178.1
type: Protein
SIO_000068: ncbiprotein

position:113993:1
position: 113993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123055:1
position: 123055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113993-113995:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:117206-117281:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:118728-118895:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123012-123055:1:exon

MAP1LC3A
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: MAP1LC3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 127535..144244
location: region:127535-144244:1
so has part: feature:127535-144244:1:exon
subclass of: SO_0000010

116495769
type: Gene
SIO_000068: ncbigene

position:127535:1
position: 127535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144244:1
position: 144244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127535-144244:1:exon

MAP1LC3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: MAP1LC3A
product: microtubule associated protein 1 light chain 3 alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198471.1
SIO_010081: MAP1LC3A
subclass of: SO_0000673
so part of: MAP1LC3A
location: join(127535..127626,137794..137849,142520..142626,143112..144244)
location: region:127535-144244:1
so has part: feature:127535-127626:1:exon
so has part: feature:137794-137849:1:exon
so has part: feature:142520-142626:1:exon
so has part: feature:143112-144244:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:127535-127626:1:exon

position:127626:1
position: 127626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:137794-137849:1:exon

position:137794:1
position: 137794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137849:1
position: 137849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:142520-142626:1:exon

position:142520:1
position: 142520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142626:1
position: 142626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:143112-144244:1:exon

position:143112:1
position: 143112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAP1LC3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: MAP1LC3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated proteins 1A/1B light chain 3A
translation: MPSDRPFKQRRAFADRCKEVQQIREQHPNKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPISEIYEQEKDEDGFLYMVYASQETFGY
SIO_010081: MAP1LC3A
subclass of: SO_0000673
so part of: MAP1LC3A
location: join(127587..127626,137794..137849,142520..142626,143112..143274)
location: region:127587-143274:1
so has part: feature:127587-127626:1:exon
so has part: feature:137794-137849:1:exon
so has part: feature:142520-142626:1:exon
so has part: feature:143112-143274:1:exon

XP_032054362.1
type: Protein
SIO_000068: ncbiprotein

position:127587:1
position: 127587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143274:1
position: 143274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127587-127626:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137794-137849:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142520-142626:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:143112-143274:1:exon

L3MBTL1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: L3MBTL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(151969..188292)
location: region:151969-188292:-1
so has part: feature:151969-188292:-1:exon
subclass of: SO_0000010

116495590
type: Gene
SIO_000068: ncbigene

position:151969:-1
position: 151969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188292:-1
position: 188292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151969-188292:-1:exon

L3MBTL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: L3MBTL1
product: L3MBTL histone methyl-lysine binding protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032198191.1
SIO_010081: L3MBTL1
subclass of: SO_0000673
so part of: L3MBTL1
location: complement(join(151969..156201,157167..157229,158077..158234,159206..159252,159589..159786,160813..160912,161167..161281,161574..161684,162264..162349,162775..162851,163983..164134,165178..165278,165819..165954,166865..166969,167570..167661,169792..169879,170514..170637,171313..171451,171605..171749,172562..172785,173535..173697,173937..174059,188250..188292))
location: region:151969-188292:-1
so has part: feature:188250-188292:-1:exon
so has part: feature:173937-174059:-1:exon
so has part: feature:173535-173697:-1:exon
so has part: feature:172562-172785:-1:exon
so has part: feature:171605-171749:-1:exon
so has part: feature:171313-171451:-1:exon
so has part: feature:170514-170637:-1:exon
so has part: feature:169792-169879:-1:exon
so has part: feature:167570-167661:-1:exon
so has part: feature:166865-166969:-1:exon
so has part: feature:165819-165954:-1:exon
so has part: feature:165178-165278:-1:exon
so has part: feature:163983-164134:-1:exon
so has part: feature:162775-162851:-1:exon
so has part: feature:162264-162349:-1:exon
so has part: feature:161574-161684:-1:exon
so has part: feature:161167-161281:-1:exon
so has part: feature:160813-160912:-1:exon
so has part: feature:159589-159786:-1:exon
so has part: feature:159206-159252:-1:exon
so has part: feature:158077-158234:-1:exon
so has part: feature:157167-157229:-1:exon
so has part: feature:151969-156201:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:188250-188292:-1:exon

position:188250:-1
position: 188250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:173937-174059:-1:exon

position:173937:-1
position: 173937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174059:-1
position: 174059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:173535-173697:-1:exon

position:173535:-1
position: 173535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173697:-1
position: 173697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:172562-172785:-1:exon

position:172562:-1
position: 172562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172785:-1
position: 172785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:171605-171749:-1:exon

position:171605:-1
position: 171605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171749:-1
position: 171749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:171313-171451:-1:exon

position:171313:-1
position: 171313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171451:-1
position: 171451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:170514-170637:-1:exon

position:170514:-1
position: 170514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170637:-1
position: 170637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:169792-169879:-1:exon

position:169792:-1
position: 169792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169879:-1
position: 169879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:167570-167661:-1:exon

position:167570:-1
position: 167570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167661:-1
position: 167661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:166865-166969:-1:exon

position:166865:-1
position: 166865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166969:-1
position: 166969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:165819-165954:-1:exon

position:165819:-1
position: 165819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165954:-1
position: 165954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:165178-165278:-1:exon

position:165178:-1
position: 165178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165278:-1
position: 165278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:163983-164134:-1:exon

position:163983:-1
position: 163983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164134:-1
position: 164134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:162775-162851:-1:exon

position:162775:-1
position: 162775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162851:-1
position: 162851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:162264-162349:-1:exon

position:162264:-1
position: 162264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162349:-1
position: 162349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:161574-161684:-1:exon

position:161574:-1
position: 161574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161684:-1
position: 161684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:161167-161281:-1:exon

position:161167:-1
position: 161167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161281:-1
position: 161281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:160813-160912:-1:exon

position:160813:-1
position: 160813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160912:-1
position: 160912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:159589-159786:-1:exon

position:159589:-1
position: 159589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159786:-1
position: 159786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:159206-159252:-1:exon

position:159206:-1
position: 159206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159252:-1
position: 159252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:158077-158234:-1:exon

position:158077:-1
position: 158077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158234:-1
position: 158234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:157167-157229:-1:exon

position:157167:-1
position: 157167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157229:-1
position: 157229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:151969-156201:-1:exon

position:156201:-1
position: 156201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

L3MBTL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: L3MBTL1
product: L3MBTL histone methyl-lysine binding protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198190.1
SIO_010081: L3MBTL1
subclass of: SO_0000673
so part of: L3MBTL1
location: complement(join(151969..156201,157167..157229,158077..158234,159206..159252,159589..159786,160813..160912,161167..161281,161574..161684,162264..162349,162775..162851,163983..164134,165178..165269,165819..165954,166865..166969,167570..167661,169792..169879,170514..170637,171313..171451,171605..171749,172562..172785,173535..173923))
location: region:151969-173923:-1
so has part: feature:173535-173923:-1:exon
so has part: feature:172562-172785:-1:exon
so has part: feature:171605-171749:-1:exon
so has part: feature:171313-171451:-1:exon
so has part: feature:170514-170637:-1:exon
so has part: feature:169792-169879:-1:exon
so has part: feature:167570-167661:-1:exon
so has part: feature:166865-166969:-1:exon
so has part: feature:165819-165954:-1:exon
so has part: feature:165178-165269:-1:exon
so has part: feature:163983-164134:-1:exon
so has part: feature:162775-162851:-1:exon
so has part: feature:162264-162349:-1:exon
so has part: feature:161574-161684:-1:exon
so has part: feature:161167-161281:-1:exon
so has part: feature:160813-160912:-1:exon
so has part: feature:159589-159786:-1:exon
so has part: feature:159206-159252:-1:exon
so has part: feature:158077-158234:-1:exon
so has part: feature:157167-157229:-1:exon
so has part: feature:151969-156201:-1:exon

position:173923:-1
position: 173923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173535-173923:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:172562-172785:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171605-171749:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171313-171451:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170514-170637:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:169792-169879:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:167570-167661:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:166865-166969:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:165819-165954:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:165178-165269:-1:exon

position:165269:-1
position: 165269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:163983-164134:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:162775-162851:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:162264-162349:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:161574-161684:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:161167-161281:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:160813-160912:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:159589-159786:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:159206-159252:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:158077-158234:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:157167-157229:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:151969-156201:-1:exon

L3MBTL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: L3MBTL1
product: L3MBTL histone methyl-lysine binding protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198189.1
SIO_010081: L3MBTL1
subclass of: SO_0000673
so part of: L3MBTL1
location: complement(join(151969..156201,157167..157229,158077..158234,159206..159252,159589..159786,160813..160912,161167..161281,161574..161684,162264..162349,162775..162851,163983..164134,165178..165278,165819..165954,166865..166969,167570..167661,169792..169879,170514..170637,171313..171451,171605..171749,172562..172785,173535..173923))
location: region:151969-173923:-1
so has part: feature:173535-173923:-1:exon
so has part: feature:172562-172785:-1:exon
so has part: feature:171605-171749:-1:exon
so has part: feature:171313-171451:-1:exon
so has part: feature:170514-170637:-1:exon
so has part: feature:169792-169879:-1:exon
so has part: feature:167570-167661:-1:exon
so has part: feature:166865-166969:-1:exon
so has part: feature:165819-165954:-1:exon
so has part: feature:165178-165278:-1:exon
so has part: feature:163983-164134:-1:exon
so has part: feature:162775-162851:-1:exon
so has part: feature:162264-162349:-1:exon
so has part: feature:161574-161684:-1:exon
so has part: feature:161167-161281:-1:exon
so has part: feature:160813-160912:-1:exon
so has part: feature:159589-159786:-1:exon
so has part: feature:159206-159252:-1:exon
so has part: feature:158077-158234:-1:exon
so has part: feature:157167-157229:-1:exon
so has part: feature:151969-156201:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:173535-173923:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:172562-172785:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171605-171749:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171313-171451:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170514-170637:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:169792-169879:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:167570-167661:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:166865-166969:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:165819-165954:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:165178-165278:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:163983-164134:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:162775-162851:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:162264-162349:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:161574-161684:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:161167-161281:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:160813-160912:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:159589-159786:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:159206-159252:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:158077-158234:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:157167-157229:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:151969-156201:-1:exon

L3MBTL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: L3MBTL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lethal(3)malignant brain tumor-like protein 1 isoform X2
translation: MVEREGPSSTVSFSLLCVCTTNLIFLAGFQCLGLCPHKVMDSRAEMEVVRSTKGNAAGEVSVHVVTTESTVQSTHLPTTAFIIPANATTINLPASTLEIQRFPREPQRSTGAERPERGAGNEPVTATVIPQISGVQTCNAVRVLEWKDGVATLPGSNLRFQINEYGTLKVVSADKMPPLEAIKEDHTEKDGDSEVAPTSRDNPTPAQDVSEQPKLPTPESMCHCDTCGRRHVSDGVREGRGFCSEHCHQQFKERSVIVENSASSTNTTEILKPVKKRKRKDYQSPSEEEYESEQMEEKQEETKNSVGDSAISNPEADTWNGSQHGASEEKKEGWSWASYLEEQKAVAAPLDLFQDYQVASQHKNGFKVGMKLEGIDPQHPSMYFILTVAEVCGYRMRLHFDGYSECHDFWLNADSPDIHPAGWFEETGHKLQPPKGYKEEEFSWTNYLKITKSQAAPKQLFVIRNTHEAPPGFEVGMKLEAVDRMNPSLICVATVTDVVDNRFLVHFDNWDDTYDYWCDPSSPYIHPVGWCQEHGKPLTPPQDYPDPDNFIWEKYLKETGASAVPAWAFKVRPPHGFLVNMKLEAVDRRTPSFIRVASVEDVEDHRIKIHFDGWSHVYDFWIDADHPDIHPIGWCSKTGHPLQPPLRPKEPASSSHGGCPTLGCKNMPHTKSSKYSFHHRKCPTPGCDGSGHVTGRFTAHYCLSGCPLAEKNQGRLKADLSDTEASARKRNLMGFPQRKKSRHHGRGRPPKYRKIQQEDFQTISSDSMHQSLFMSALSAHPDRSLSLCWEQHCKLLPGVAGITATTVAKWTIDEVFSFVQTLTGCEDQAKLFKDEMIDGEAFLLLTQTDIVKIMSVKLGPALKIYNAILMFKNADDTLK
SIO_010081: L3MBTL1
subclass of: SO_0000673
so part of: L3MBTL1
location: complement(join(156067..156201,157167..157229,158077..158234,159206..159252,159589..159786,160813..160912,161167..161281,161574..161684,162264..162349,162775..162851,163983..164134,165178..165269,165819..165954,166865..166969,167570..167661,169792..169879,170514..170637,171313..171451,171605..171749,172562..172785,173535..173787))
location: region:156067-173787:-1
so has part: feature:173535-173787:-1:exon
so has part: feature:172562-172785:-1:exon
so has part: feature:171605-171749:-1:exon
so has part: feature:171313-171451:-1:exon
so has part: feature:170514-170637:-1:exon
so has part: feature:169792-169879:-1:exon
so has part: feature:167570-167661:-1:exon
so has part: feature:166865-166969:-1:exon
so has part: feature:165819-165954:-1:exon
so has part: feature:165178-165269:-1:exon
so has part: feature:163983-164134:-1:exon
so has part: feature:162775-162851:-1:exon
so has part: feature:162264-162349:-1:exon
so has part: feature:161574-161684:-1:exon
so has part: feature:161167-161281:-1:exon
so has part: feature:160813-160912:-1:exon
so has part: feature:159589-159786:-1:exon
so has part: feature:159206-159252:-1:exon
so has part: feature:158077-158234:-1:exon
so has part: feature:157167-157229:-1:exon
so has part: feature:156067-156201:-1:exon

XP_032054081.1
type: Protein
SIO_000068: ncbiprotein

position:156067:-1
position: 156067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173787:-1
position: 173787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173535-173787:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:172562-172785:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171605-171749:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171313-171451:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170514-170637:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:169792-169879:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:167570-167661:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:166865-166969:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:165819-165954:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:165178-165269:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:163983-164134:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:162775-162851:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:162264-162349:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:161574-161684:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:161167-161281:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:160813-160912:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:159589-159786:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:159206-159252:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:158077-158234:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:157167-157229:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:156067-156201:-1:exon

L3MBTL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: L3MBTL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lethal(3)malignant brain tumor-like protein 1 isoform X1
translation: MVEREGPSSTVSFSLLCVCTTNLIFLAGFQCLGLCPHKVMDSRAEMEVVRSTKGNAAGEVSVHVVTTESTVQSTHLPTTAFIIPANATTINLPASTLEIQRFPREPQRSTGAERPERGAGNEPVTATVIPQISGVQTCNAVRVLEWKDGVATLPGSNLRFQINEYGTLKVVSADKMPPLEAIKEDHTEKDGDSEVAPTSRDNPTPAQDVSEQPKLPTPESMCHCDTCGRRHVSDGVREGRGFCSEHCHQQFKERSVIVENSASSTNTTEILKPVKKRKRKDYQSPSEEEYESEQMEEKQEETKNSVGDSAISNPEADTWNGSQHGASEEKKEGWSWASYLEEQKAVAAPLDLFQDYQVASQHKNGFKVGMKLEGIDPQHPSMYFILTVAEVCGYRMRLHFDGYSECHDFWLNADSPDIHPAGWFEETGHKLQPPKGVLGYKEEEFSWTNYLKITKSQAAPKQLFVIRNTHEAPPGFEVGMKLEAVDRMNPSLICVATVTDVVDNRFLVHFDNWDDTYDYWCDPSSPYIHPVGWCQEHGKPLTPPQDYPDPDNFIWEKYLKETGASAVPAWAFKVRPPHGFLVNMKLEAVDRRTPSFIRVASVEDVEDHRIKIHFDGWSHVYDFWIDADHPDIHPIGWCSKTGHPLQPPLRPKEPASSSHGGCPTLGCKNMPHTKSSKYSFHHRKCPTPGCDGSGHVTGRFTAHYCLSGCPLAEKNQGRLKADLSDTEASARKRNLMGFPQRKKSRHHGRGRPPKYRKIQQEDFQTISSDSMHQSLFMSALSAHPDRSLSLCWEQHCKLLPGVAGITATTVAKWTIDEVFSFVQTLTGCEDQAKLFKDEMIDGEAFLLLTQTDIVKIMSVKLGPALKIYNAILMFKNADDTLK
SIO_010081: L3MBTL1
subclass of: SO_0000673
so part of: L3MBTL1
location: complement(join(156067..156201,157167..157229,158077..158234,159206..159252,159589..159786,160813..160912,161167..161281,161574..161684,162264..162349,162775..162851,163983..164134,165178..165278,165819..165954,166865..166969,167570..167661,169792..169879,170514..170637,171313..171451,171605..171749,172562..172785,173535..173787))
location: region:156067-173787:-1
so has part: feature:173535-173787:-1:exon
so has part: feature:172562-172785:-1:exon
so has part: feature:171605-171749:-1:exon
so has part: feature:171313-171451:-1:exon
so has part: feature:170514-170637:-1:exon
so has part: feature:169792-169879:-1:exon
so has part: feature:167570-167661:-1:exon
so has part: feature:166865-166969:-1:exon
so has part: feature:165819-165954:-1:exon
so has part: feature:165178-165278:-1:exon
so has part: feature:163983-164134:-1:exon
so has part: feature:162775-162851:-1:exon
so has part: feature:162264-162349:-1:exon
so has part: feature:161574-161684:-1:exon
so has part: feature:161167-161281:-1:exon
so has part: feature:160813-160912:-1:exon
so has part: feature:159589-159786:-1:exon
so has part: feature:159206-159252:-1:exon
so has part: feature:158077-158234:-1:exon
so has part: feature:157167-157229:-1:exon
so has part: feature:156067-156201:-1:exon

XP_032054080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173535-173787:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:172562-172785:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171605-171749:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171313-171451:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170514-170637:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:169792-169879:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:167570-167661:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:166865-166969:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:165819-165954:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:165178-165278:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:163983-164134:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:162775-162851:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:162264-162349:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:161574-161684:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:161167-161281:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:160813-160912:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:159589-159786:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:159206-159252:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:158077-158234:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:157167-157229:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:156067-156201:-1:exon

L3MBTL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: L3MBTL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lethal(3)malignant brain tumor-like protein 1 isoform X3
translation: MDSRAEMEVVRSTKGNAAGEVSVHVVTTESTVQSTHLPTTAFIIPANATTINLPASTLEIQRFPREPQRSTGAERPERGAGNEPVTATVIPQISGVQTCNAVRVLEWKDGVATLPGSNLRFQINEYGTLKVVSADKMPPLEAIKEDHTEKDGDSEVAPTSRDNPTPAQDVSEQPKLPTPESMCHCDTCGRRHVSDGVREGRGFCSEHCHQQFKERSVIVENSASSTNTTEILKPVKKRKRKDYQSPSEEEYESEQMEEKQEETKNSVGDSAISNPEADTWNGSQHGASEEKKEGWSWASYLEEQKAVAAPLDLFQDYQVASQHKNGFKVGMKLEGIDPQHPSMYFILTVAEVCGYRMRLHFDGYSECHDFWLNADSPDIHPAGWFEETGHKLQPPKGVLGYKEEEFSWTNYLKITKSQAAPKQLFVIRNTHEAPPGFEVGMKLEAVDRMNPSLICVATVTDVVDNRFLVHFDNWDDTYDYWCDPSSPYIHPVGWCQEHGKPLTPPQDYPDPDNFIWEKYLKETGASAVPAWAFKVRPPHGFLVNMKLEAVDRRTPSFIRVASVEDVEDHRIKIHFDGWSHVYDFWIDADHPDIHPIGWCSKTGHPLQPPLRPKEPASSSHGGCPTLGCKNMPHTKSSKYSFHHRKCPTPGCDGSGHVTGRFTAHYCLSGCPLAEKNQGRLKADLSDTEASARKRNLMGFPQRKKSRHHGRGRPPKYRKIQQEDFQTISSDSMHQSLFMSALSAHPDRSLSLCWEQHCKLLPGVAGITATTVAKWTIDEVFSFVQTLTGCEDQAKLFKDEMIDGEAFLLLTQTDIVKIMSVKLGPALKIYNAILMFKNADDTLK
SIO_010081: L3MBTL1
subclass of: SO_0000673
so part of: L3MBTL1
location: complement(join(156067..156201,157167..157229,158077..158234,159206..159252,159589..159786,160813..160912,161167..161281,161574..161684,162264..162349,162775..162851,163983..164134,165178..165278,165819..165954,166865..166969,167570..167661,169792..169879,170514..170637,171313..171451,171605..171749,172562..172785,173535..173670))
location: region:156067-173670:-1
so has part: feature:173535-173670:-1:exon
so has part: feature:172562-172785:-1:exon
so has part: feature:171605-171749:-1:exon
so has part: feature:171313-171451:-1:exon
so has part: feature:170514-170637:-1:exon
so has part: feature:169792-169879:-1:exon
so has part: feature:167570-167661:-1:exon
so has part: feature:166865-166969:-1:exon
so has part: feature:165819-165954:-1:exon
so has part: feature:165178-165278:-1:exon
so has part: feature:163983-164134:-1:exon
so has part: feature:162775-162851:-1:exon
so has part: feature:162264-162349:-1:exon
so has part: feature:161574-161684:-1:exon
so has part: feature:161167-161281:-1:exon
so has part: feature:160813-160912:-1:exon
so has part: feature:159589-159786:-1:exon
so has part: feature:159206-159252:-1:exon
so has part: feature:158077-158234:-1:exon
so has part: feature:157167-157229:-1:exon
so has part: feature:156067-156201:-1:exon

XP_032054082.1
type: Protein
SIO_000068: ncbiprotein

position:173670:-1
position: 173670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173535-173670:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:172562-172785:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171605-171749:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171313-171451:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170514-170637:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:169792-169879:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:167570-167661:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:166865-166969:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:165819-165954:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:165178-165278:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:163983-164134:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:162775-162851:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:162264-162349:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:161574-161684:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:161167-161281:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:160813-160912:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:159589-159786:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:159206-159252:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:158077-158234:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:157167-157229:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:156067-156201:-1:exon

SRSF6
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: SRSF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(195936..199825)
location: region:195936-199825:-1
so has part: feature:195936-199825:-1:exon
subclass of: SO_0000010

116495683
type: Gene
SIO_000068: ncbigene

position:195936:-1
position: 195936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199825:-1
position: 199825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195936-199825:-1:exon

SRSF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SRSF6
product: serine and arginine rich splicing factor 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198344.1
SIO_010081: SRSF6
subclass of: SO_0000673
so part of: SRSF6
location: complement(join(195936..196514,196633..196722,197084..197292,197519..197646,199041..199189,199565..199825))
location: region:195936-199825:-1
so has part: feature:199565-199825:-1:exon
so has part: feature:199041-199189:-1:exon
so has part: feature:197519-197646:-1:exon
so has part: feature:197084-197292:-1:exon
so has part: feature:196633-196722:-1:exon
so has part: feature:195936-196514:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:199565-199825:-1:exon

position:199565:-1
position: 199565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:199041-199189:-1:exon

position:199041:-1
position: 199041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199189:-1
position: 199189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:197519-197646:-1:exon

position:197519:-1
position: 197519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197646:-1
position: 197646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:197084-197292:-1:exon

position:197084:-1
position: 197084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197292:-1
position: 197292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:196633-196722:-1:exon

position:196633:-1
position: 196633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196722:-1
position: 196722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:195936-196514:-1:exon

position:196514:-1
position: 196514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SRSF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SRSF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 6
translation: MPRVYIGRLSYHVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKDLCGERVIVEHARGPRRDRDGYSYSSRSGGGGGYSSRRQSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRKIRLVEDKPRSSHRRSYSGSRSRSRSRRRSRSRSRRSRSSRSRSRSVTKSRSRSKSRSRSKDRSRSRSKSRKSRSKSKSKPKSDRGSRSHSRSKEKSEKSRSRSRSRSRSPKENGKGDAKSKSRSRSRSRSNSPQQQPSTKARSESPPKRAASRSCSRSRSKSRSRSRSSSRD
SIO_010081: SRSF6
subclass of: SO_0000673
so part of: SRSF6
location: complement(join(196151..196514,196633..196722,197084..197292,197519..197646,199041..199189,199565..199671))
location: region:196151-199671:-1
so has part: feature:199565-199671:-1:exon
so has part: feature:199041-199189:-1:exon
so has part: feature:197519-197646:-1:exon
so has part: feature:197084-197292:-1:exon
so has part: feature:196633-196722:-1:exon
so has part: feature:196151-196514:-1:exon

XP_032054235.1
type: Protein
SIO_000068: ncbiprotein

position:196151:-1
position: 196151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199671:-1
position: 199671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199565-199671:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:199041-199189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197519-197646:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197084-197292:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196633-196722:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196151-196514:-1:exon

LOC116495686
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116495686
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 213580..226535
location: region:213580-226535:1
so has part: feature:213580-226535:1:exon
subclass of: SO_0000010

116495686
type: Gene
SIO_000068: ncbigene

position:213580:1
position: 213580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226535:1
position: 226535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213580-226535:1:exon

LOC116495686
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116495686
product: ubiquitin-conjugating enzyme E2 variant 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198346.1
SIO_010081: LOC116495686
subclass of: SO_0000673
so part of: LOC116495686
location: join(213580..213652,222543..222692,225839..225964,226359..226535)
location: region:213580-226535:1
so has part: feature:213580-213652:1:exon
so has part: feature:222543-222692:1:exon
so has part: feature:225839-225964:1:exon
so has part: feature:226359-226535:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:213580-213652:1:exon

position:213652:1
position: 213652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:222543-222692:1:exon

position:222543:1
position: 222543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222692:1
position: 222692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:225839-225964:1:exon

position:225839:1
position: 225839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225964:1
position: 225964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:226359-226535:1:exon

position:226359:1
position: 226359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116495686
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116495686
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 variant 1
translation: MAATTAAGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN
SIO_010081: LOC116495686
subclass of: SO_0000673
so part of: LOC116495686
location: join(213632..213652,222543..222692,225839..225964,226359..226505)
location: region:213632-226505:1
so has part: feature:213632-213652:1:exon
so has part: feature:222543-222692:1:exon
so has part: feature:225839-225964:1:exon
so has part: feature:226359-226505:1:exon

XP_032054237.1
type: Protein
SIO_000068: ncbiprotein

position:213632:1
position: 213632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226505:1
position: 226505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213632-213652:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:222543-222692:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:225839-225964:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:226359-226505:1:exon

SNAI1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: SNAI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(280452..283848)
location: region:280452-283848:-1
so has part: feature:280452-283848:-1:exon
subclass of: SO_0000010

116495719
type: Gene
SIO_000068: ncbigene

position:280452:-1
position: 280452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283848:-1
position: 283848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280452-283848:-1:exon

SNAI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SNAI1
product: snail family transcriptional repressor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032198391.1
SIO_010081: SNAI1
subclass of: SO_0000673
so part of: SNAI1
location: complement(join(280452..281568,282670..283179,283770..283848))
location: region:280452-283848:-1
so has part: feature:283770-283848:-1:exon
so has part: feature:282670-283179:-1:exon
so has part: feature:280452-281568:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:283770-283848:-1:exon

position:283770:-1
position: 283770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:282670-283179:-1:exon

position:282670:-1
position: 282670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283179:-1
position: 283179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:280452-281568:-1:exon

position:281568:-1
position: 281568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNAI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SNAI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein SNAI1
translation: MPRSFLVKKHFSASKKPNYSELESQTVLATPLLYETCPLSVIPPPEVLGPGAYYPPLVWDAGLLSSLFPAGPGTEAEAAGGAAPALDLTVLSSEEDEGKSSGPPSPTSAPATAERFRCAQCAKAYSTFAGLSKHKQLHCDAQTRKSFSCKYCEKEYVSLGALKMHIRSHTLPCVCKMCGKAFSRPWLLQGHIRTHTGEKPFSCTHCNRAFADRSNLRAHLQTHSDVKKYQCKTCSRTFSRMSLLHKHEETGCSGTR
SIO_010081: SNAI1
subclass of: SO_0000673
so part of: SNAI1
location: complement(join(281387..281568,282670..283179,283770..283848))
location: region:281387-283848:-1
so has part: feature:283770-283848:-1:exon
so has part: feature:282670-283179:-1:exon
so has part: feature:281387-281568:-1:exon

XP_032054282.1
type: Protein
SIO_000068: ncbiprotein

position:281387:-1
position: 281387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283770-283848:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282670-283179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:281387-281568:-1:exon

RNF114
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: RNF114
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(286526..292520)
location: region:286526-292520:-1
so has part: feature:286526-292520:-1:exon
subclass of: SO_0000010

116495697
type: Gene
SIO_000068: ncbigene

position:286526:-1
position: 286526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292520:-1
position: 292520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286526-292520:-1:exon

RNF114
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: RNF114
product: ring finger protein 114
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198364.1
SIO_010081: RNF114
subclass of: SO_0000673
so part of: RNF114
location: complement(join(286526..288474,288689..288796,289654..289768,290507..290613,291648..291798,292354..292520))
location: region:286526-292520:-1
so has part: feature:292354-292520:-1:exon
so has part: feature:291648-291798:-1:exon
so has part: feature:290507-290613:-1:exon
so has part: feature:289654-289768:-1:exon
so has part: feature:288689-288796:-1:exon
so has part: feature:286526-288474:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:292354-292520:-1:exon

position:292354:-1
position: 292354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:291648-291798:-1:exon

position:291648:-1
position: 291648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291798:-1
position: 291798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:290507-290613:-1:exon

position:290507:-1
position: 290507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290613:-1
position: 290613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:289654-289768:-1:exon

position:289654:-1
position: 289654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289768:-1
position: 289768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:288689-288796:-1:exon

position:288689:-1
position: 288689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288796:-1
position: 288796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:286526-288474:-1:exon

position:288474:-1
position: 288474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNF114
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: RNF114
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF114
translation: MAVAGGGGGSSASCAPSARGLERPDPLARLTCPVCLEVFDSPVRVPCGHVFCTPCLQECLKLKKPVCGVCRSTLAPGSRALDLEKQIEATETTCNGCNKKMYLSKMRSHAASCSKYQNYIMEGVKAVTKEPLHNTRNFPNRFTFPCPYCSEKNFDQEGLVEHCKTLHSMDAKQVVCPICASMPWGDPNYRSANFMEHLQRRHRFSYDTFVDYDADEDDMMAQVLMRSLRDK
SIO_010081: RNF114
subclass of: SO_0000673
so part of: RNF114
location: complement(join(288409..288474,288689..288796,289654..289768,290507..290613,291648..291798,292354..292502))
location: region:288409-292502:-1
so has part: feature:292354-292502:-1:exon
so has part: feature:291648-291798:-1:exon
so has part: feature:290507-290613:-1:exon
so has part: feature:289654-289768:-1:exon
so has part: feature:288689-288796:-1:exon
so has part: feature:288409-288474:-1:exon

XP_032054255.1
type: Protein
SIO_000068: ncbiprotein

position:288409:-1
position: 288409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292502:-1
position: 292502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292354-292502:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:291648-291798:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290507-290613:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289654-289768:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288689-288796:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:288409-288474:-1:exon

SPATA2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: SPATA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 292878..301172
location: region:292878-301172:1
so has part: feature:292878-301172:1:exon
subclass of: SO_0000010

116495771
type: Gene
SIO_000068: ncbigene

position:292878:1
position: 292878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301172:1
position: 301172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292878-301172:1:exon

SPATA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SPATA2
product: spermatogenesis associated 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198474.1
SIO_010081: SPATA2
subclass of: SO_0000673
so part of: SPATA2
location: join(292878..292935,295107..295532,297330..301172)
location: region:292878-301172:1
so has part: feature:292878-292935:1:exon
so has part: feature:295107-295532:1:exon
so has part: feature:297330-301172:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:292878-292935:1:exon

position:292935:1
position: 292935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:295107-295532:1:exon

position:295107:1
position: 295107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295532:1
position: 295532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:297330-301172:1:exon

position:297330:1
position: 297330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPATA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SPATA2
product: spermatogenesis associated 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198475.1
SIO_010081: SPATA2
subclass of: SO_0000673
so part of: SPATA2
location: join(292878..292935,295107..295249,295376..295532,297330..301172)
location: region:292878-301172:1
so has part: feature:292878-292935:1:exon
so has part: feature:295107-295249:1:exon
so has part: feature:295376-295532:1:exon
so has part: feature:297330-301172:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:292878-292935:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295107-295249:1:exon

position:295249:1
position: 295249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:295376-295532:1:exon

position:295376:1
position: 295376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:297330-301172:1:exon

SPATA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SPATA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 2 isoform X1
translation: MDTKYKDDLFRKYVQFHECKLSVSDNKQRPINDEYLRVAASALFCLPKIDPFYRFRLIKFYEMAENSLRALKSSSLHSLHNAFSMLETVGINLFLYPWKKEFKNIKTYTGPFVYYVKSALTEDDVRQILNYMGYVQELGTTYKLKEQVDAIQVKMVSFELFLAKVECEQLLEIHLQVKDKGYSEIDVINERKTSNEDVRGCSEAMKRRAECKENLNTSMARMVLQKSASERASKDYFKPKVSKPSKSVDTYDNYWENKKPPLMSSLSLRKEPILVDAEDDIKDEIIRPSPSLLTMSSSPHACSDEFLPTSSHHNGMLRTNVPYSSYFSAQEDLDLYTDPDSRSMLNFKRQEAIKPDVWLLKNDANPVYHKRAHLAKEAASIKCQNCGVPCGTSVCQKCDNLFNSRQDYPAVKQSTYSIKSVPNDGLSPVSALREKSQYTSQTQSQERASQFSSKSKSSGTSRCGFCNRSGAANTCTFCSKVSCDTCLSAYYYDPCCRKSELHRFMPNNQLNYKSAQLSHVVYR
SIO_010081: SPATA2
subclass of: SO_0000673
so part of: SPATA2
location: join(295215..295532,297330..298583)
location: region:295215-298583:1
so has part: feature:295215-295532:1:exon
so has part: feature:297330-298583:1:exon

XP_032054365.1
type: Protein
SIO_000068: ncbiprotein

position:295215:1
position: 295215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298583:1
position: 298583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295215-295532:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297330-298583:1:exon

SPATA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SPATA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 2 isoform X2
translation: MDTKYKDDLFRKFRLIKFYEMAENSLRALKSSSLHSLHNAFSMLETVGINLFLYPWKKEFKNIKTYTGPFVYYVKSALTEDDVRQILNYMGYVQELGTTYKLKEQVDAIQVKMVSFELFLAKVECEQLLEIHLQVKDKGYSEIDVINERKTSNEDVRGCSEAMKRRAECKENLNTSMARMVLQKSASERASKDYFKPKVSKPSKSVDTYDNYWENKKPPLMSSLSLRKEPILVDAEDDIKDEIIRPSPSLLTMSSSPHACSDEFLPTSSHHNGMLRTNVPYSSYFSAQEDLDLYTDPDSRSMLNFKRQEAIKPDVWLLKNDANPVYHKRAHLAKEAASIKCQNCGVPCGTSVCQKCDNLFNSRQDYPAVKQSTYSIKSVPNDGLSPVSALREKSQYTSQTQSQERASQFSSKSKSSGTSRCGFCNRSGAANTCTFCSKVSCDTCLSAYYYDPCCRKSELHRFMPNNQLNYKSAQLSHVVYR
SIO_010081: SPATA2
subclass of: SO_0000673
so part of: SPATA2
location: join(295215..295249,295376..295532,297330..298583)
location: region:295215-298583:1
so has part: feature:295215-295249:1:exon
so has part: feature:295376-295532:1:exon
so has part: feature:297330-298583:1:exon

XP_032054366.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295215-295249:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295376-295532:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:297330-298583:1:exon

LOC116495782
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116495782
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 319239..332534
location: region:319239-332534:1
so has part: feature:319239-332534:1:exon
subclass of: SO_0000010

116495782
type: Gene
SIO_000068: ncbigene

position:319239:1
position: 319239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332534:1
position: 332534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319239-332534:1:exon

LOC116495782
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116495782
product: opsin-5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032198493.1
SIO_010081: LOC116495782
subclass of: SO_0000673
so part of: LOC116495782
location: join(319239..319405,326511..326598,328655..328817,329147..329274,330430..330758,331962..332534)
location: region:319239-332534:1
so has part: feature:319239-319405:1:exon
so has part: feature:326511-326598:1:exon
so has part: feature:328655-328817:1:exon
so has part: feature:329147-329274:1:exon
so has part: feature:330430-330758:1:exon
so has part: feature:331962-332534:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:319239-319405:1:exon

position:319405:1
position: 319405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:326511-326598:1:exon

position:326511:1
position: 326511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326598:1
position: 326598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:328655-328817:1:exon

position:328655:1
position: 328655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328817:1
position: 328817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:329147-329274:1:exon

position:329147:1
position: 329147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329274:1
position: 329274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:330430-330758:1:exon

position:330430:1
position: 330430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330758:1
position: 330758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:331962-332534:1:exon

position:331962:1
position: 331962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116495782
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116495782
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: opsin-5-like
translation: MSLEHLEAQHGAGMDPQREMGNASNTSMFTSTLSEREDLIFGTLYLVFGLMSLSGNSLLLLVAYRKRSTLKPTEFFIVNLAVSDLSMTVTLFPLATPSFFAHRWLFNQAMCTIYAFCGVLFGLCSLTSLTVLSAVCCLKVCYPAYGNKFSPSHAGVLLLCVWAYALLFAMAPLAEWGSYGPEPYGTACCITWEASSQEATLYILALFIFCYLLPCLLILASYSLILWTVQVSRRAVRQHVSPQRRARGTHGPMVKLSIAVCLGFLAAWTPYAVVALWAVCRGAGQVPALAFVLSAVFAKSSTLYNPLVYLLFKPNFHKFLSKDIVLLQAIRTVLCCGCLGTMLQPFPPGDASTRFSLGFSHHHGACRSCSDAFESFSNYPRCYKLPQGPGPSPIPLAILADGATGQPGLKSAVQVMVLMTRRRSGLGAASVAGEVLPEGIMKDLL
SIO_010081: LOC116495782
subclass of: SO_0000673
so part of: LOC116495782
location: join(319349..319405,326511..326598,328655..328817,329147..329274,330430..330758,331962..332534)
location: region:319349-332534:1
so has part: feature:319349-319405:1:exon
so has part: feature:326511-326598:1:exon
so has part: feature:328655-328817:1:exon
so has part: feature:329147-329274:1:exon
so has part: feature:330430-330758:1:exon
so has part: feature:331962-332534:1:exon

XP_032054384.1
type: Protein
SIO_000068: ncbiprotein

position:319349:1
position: 319349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319349-319405:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:326511-326598:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:328655-328817:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:329147-329274:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:330430-330758:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:331962-332534:1:exon

SLC9A8
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: SLC9A8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(340410..367763)
location: region:340410-367763:-1
so has part: feature:340410-367763:-1:exon
subclass of: SO_0000010

116495591
type: Gene
SIO_000068: ncbigene

position:340410:-1
position: 340410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367763:-1
position: 367763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340410-367763:-1:exon

SLC9A8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SLC9A8
product: solute carrier family 9 member A8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198193.1
SIO_010081: SLC9A8
subclass of: SO_0000673
so part of: SLC9A8
location: complement(join(340410..341162,342472..342618,343679..343899,344323..344434,346189..346271,347837..347953,349863..349968,351835..351973,353255..353398,354459..354493,355237..355338,356300..356383,357883..357941,362892..362972,367681..367763))
location: region:340410-367763:-1
so has part: feature:367681-367763:-1:exon
so has part: feature:362892-362972:-1:exon
so has part: feature:357883-357941:-1:exon
so has part: feature:356300-356383:-1:exon
so has part: feature:355237-355338:-1:exon
so has part: feature:354459-354493:-1:exon
so has part: feature:353255-353398:-1:exon
so has part: feature:351835-351973:-1:exon
so has part: feature:349863-349968:-1:exon
so has part: feature:347837-347953:-1:exon
so has part: feature:346189-346271:-1:exon
so has part: feature:344323-344434:-1:exon
so has part: feature:343679-343899:-1:exon
so has part: feature:342472-342618:-1:exon
so has part: feature:340410-341162:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:367681-367763:-1:exon

position:367681:-1
position: 367681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:362892-362972:-1:exon

position:362892:-1
position: 362892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362972:-1
position: 362972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:357883-357941:-1:exon

position:357883:-1
position: 357883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357941:-1
position: 357941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:356300-356383:-1:exon

position:356300:-1
position: 356300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356383:-1
position: 356383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:355237-355338:-1:exon

position:355237:-1
position: 355237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355338:-1
position: 355338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:354459-354493:-1:exon

position:354459:-1
position: 354459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354493:-1
position: 354493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:353255-353398:-1:exon

position:353255:-1
position: 353255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353398:-1
position: 353398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:351835-351973:-1:exon

position:351835:-1
position: 351835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351973:-1
position: 351973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:349863-349968:-1:exon

position:349863:-1
position: 349863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349968:-1
position: 349968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:347837-347953:-1:exon

position:347837:-1
position: 347837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347953:-1
position: 347953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:346189-346271:-1:exon

position:346189:-1
position: 346189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346271:-1
position: 346271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:344323-344434:-1:exon

position:344323:-1
position: 344323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344434:-1
position: 344434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:343679-343899:-1:exon

position:343679:-1
position: 343679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343899:-1
position: 343899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:342472-342618:-1:exon

position:342472:-1
position: 342472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342618:-1
position: 342618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:340410-341162:-1:exon

position:341162:-1
position: 341162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC9A8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SLC9A8
product: solute carrier family 9 member A8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198192.1
SIO_010081: SLC9A8
subclass of: SO_0000673
so part of: SLC9A8
location: complement(join(340410..341162,342472..342618,343679..343899,344323..344434,346189..346271,347837..347953,349863..349968,351835..351973,353255..353398,354459..354493,355237..355338,356300..356383,357883..357941,362892..362972,366953..367131,367681..367763))
location: region:340410-367763:-1
so has part: feature:367681-367763:-1:exon
so has part: feature:366953-367131:-1:exon
so has part: feature:362892-362972:-1:exon
so has part: feature:357883-357941:-1:exon
so has part: feature:356300-356383:-1:exon
so has part: feature:355237-355338:-1:exon
so has part: feature:354459-354493:-1:exon
so has part: feature:353255-353398:-1:exon
so has part: feature:351835-351973:-1:exon
so has part: feature:349863-349968:-1:exon
so has part: feature:347837-347953:-1:exon
so has part: feature:346189-346271:-1:exon
so has part: feature:344323-344434:-1:exon
so has part: feature:343679-343899:-1:exon
so has part: feature:342472-342618:-1:exon
so has part: feature:340410-341162:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:367681-367763:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:366953-367131:-1:exon

position:366953:-1
position: 366953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367131:-1
position: 367131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:362892-362972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:357883-357941:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:356300-356383:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:355237-355338:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:354459-354493:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:353255-353398:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:351835-351973:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:349863-349968:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:347837-347953:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:346189-346271:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:344323-344434:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:343679-343899:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:342472-342618:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:340410-341162:-1:exon

SLC9A8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SLC9A8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/hydrogen exchanger 8 isoform X1
translation: MAEFANVTHEAINVTLRTTLAATTKLVVPTPAKPILPVQTGVQAQQEEQSSGMTIFFSLLVLAICIILVHLLIKYRLHFLPESVAVVSLGILMGAFIKIIEAQKLANWKEEEMFRPNMFFLLLLPPIIFESGYSLHKGNFFQNIGSITLFSVFGTAISAFIVGGGIYFLGQADVIYKLNMTDSFAFGSLISAVDPVATIAIFNALNVDPVLNMLVFGESILNDAVSIVLTNTAEGLTRENMSDVSGWQTFLQALGYFLKMFFGSAALGTLTGLISALVLKHIDLRKTPSLEFGMMIIFAYLPYGLAEGISLSGIMAILFSGIVMSHYTHHNLSPVTQILMQQTLRTVAFMCETCVFAFLGLSIFSFPHKFETSFVIWCIVLVLFGRAVNIFPLSYLLNFFRDHKITPKMMFIMWFSGLRGAIPYALSLHLGLEPIEKRQLIGTTTIIIVLFTILLLGGGTMPLIRLIDIEDSKARKRNKKDINLSKTEKMGNTIESEHLSELTEEEYEAQYIKRQDLKGFMWLDAKYLNPFFTRRLTQEDLHHGRIQMKTLTNKWYEEVRQGPSGSEDDEQELL
SIO_010081: SLC9A8
subclass of: SO_0000673
so part of: SLC9A8
location: complement(join(341055..341162,342472..342618,343679..343899,344323..344434,346189..346271,347837..347953,349863..349968,351835..351973,353255..353398,354459..354493,355237..355338,356300..356383,357883..357941,362892..362972,366953..367131,367681..367688))
location: region:341055-367688:-1
so has part: feature:367681-367688:-1:exon
so has part: feature:366953-367131:-1:exon
so has part: feature:362892-362972:-1:exon
so has part: feature:357883-357941:-1:exon
so has part: feature:356300-356383:-1:exon
so has part: feature:355237-355338:-1:exon
so has part: feature:354459-354493:-1:exon
so has part: feature:353255-353398:-1:exon
so has part: feature:351835-351973:-1:exon
so has part: feature:349863-349968:-1:exon
so has part: feature:347837-347953:-1:exon
so has part: feature:346189-346271:-1:exon
so has part: feature:344323-344434:-1:exon
so has part: feature:343679-343899:-1:exon
so has part: feature:342472-342618:-1:exon
so has part: feature:341055-341162:-1:exon

XP_032054083.1
type: Protein
SIO_000068: ncbiprotein

position:341055:-1
position: 341055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367688:-1
position: 367688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367681-367688:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:366953-367131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:362892-362972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:357883-357941:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:356300-356383:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:355237-355338:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:354459-354493:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:353255-353398:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:351835-351973:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:349863-349968:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:347837-347953:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:346189-346271:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:344323-344434:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:343679-343899:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:342472-342618:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:341055-341162:-1:exon

SLC9A8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SLC9A8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/hydrogen exchanger 8 isoform X2
translation: MGAFIKIIEAQKLANWKEEEMFRPNMFFLLLLPPIIFESGYSLHKGNFFQNIGSITLFSVFGTAISAFIVGGGIYFLGQADVIYKLNMTDSFAFGSLISAVDPVATIAIFNALNVDPVLNMLVFGESILNDAVSIVLTNTAEGLTRENMSDVSGWQTFLQALGYFLKMFFGSAALGTLTGLISALVLKHIDLRKTPSLEFGMMIIFAYLPYGLAEGISLSGIMAILFSGIVMSHYTHHNLSPVTQILMQQTLRTVAFMCETCVFAFLGLSIFSFPHKFETSFVIWCIVLVLFGRAVNIFPLSYLLNFFRDHKITPKMMFIMWFSGLRGAIPYALSLHLGLEPIEKRQLIGTTTIIIVLFTILLLGGGTMPLIRLIDIEDSKARKRNKKDINLSKTEKMGNTIESEHLSELTEEEYEAQYIKRQDLKGFMWLDAKYLNPFFTRRLTQEDLHHGRIQMKTLTNKWYEEVRQGPSGSEDDEQELL
SIO_010081: SLC9A8
subclass of: SO_0000673
so part of: SLC9A8
location: complement(join(341055..341162,342472..342618,343679..343899,344323..344434,346189..346271,347837..347953,349863..349968,351835..351973,353255..353398,354459..354493,355237..355338,356300..356383,357883..357933))
location: region:341055-357933:-1
so has part: feature:357883-357933:-1:exon
so has part: feature:356300-356383:-1:exon
so has part: feature:355237-355338:-1:exon
so has part: feature:354459-354493:-1:exon
so has part: feature:353255-353398:-1:exon
so has part: feature:351835-351973:-1:exon
so has part: feature:349863-349968:-1:exon
so has part: feature:347837-347953:-1:exon
so has part: feature:346189-346271:-1:exon
so has part: feature:344323-344434:-1:exon
so has part: feature:343679-343899:-1:exon
so has part: feature:342472-342618:-1:exon
so has part: feature:341055-341162:-1:exon

XP_032054084.1
type: Protein
SIO_000068: ncbiprotein

position:357933:-1
position: 357933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357883-357933:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:356300-356383:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:355237-355338:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:354459-354493:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:353255-353398:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:351835-351973:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:349863-349968:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:347837-347953:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:346189-346271:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:344323-344434:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:343679-343899:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:342472-342618:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:341055-341162:-1:exon

B4GALT5
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: B4GALT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 385300..417620
location: region:385300-417620:1
so has part: feature:385300-417620:1:exon
subclass of: SO_0000010

116495624
type: Gene
SIO_000068: ncbigene

position:385300:1
position: 385300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417620:1
position: 417620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385300-417620:1:exon

B4GALT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: B4GALT5
product: beta-1,4-galactosyltransferase 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198261.1
SIO_010081: B4GALT5
subclass of: SO_0000673
so part of: B4GALT5
location: join(385300..385482,405811..405945,409212..409325,410138..410262,410656..410772,411593..411780,411978..412100,412554..412655,414576..417620)
location: region:385300-417620:1
so has part: feature:385300-385482:1:exon
so has part: feature:405811-405945:1:exon
so has part: feature:409212-409325:1:exon
so has part: feature:410138-410262:1:exon
so has part: feature:410656-410772:1:exon
so has part: feature:411593-411780:1:exon
so has part: feature:411978-412100:1:exon
so has part: feature:412554-412655:1:exon
so has part: feature:414576-417620:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:385300-385482:1:exon

position:385482:1
position: 385482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:405811-405945:1:exon

position:405811:1
position: 405811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405945:1
position: 405945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:409212-409325:1:exon

position:409212:1
position: 409212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409325:1
position: 409325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:410138-410262:1:exon

position:410138:1
position: 410138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410262:1
position: 410262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:410656-410772:1:exon

position:410656:1
position: 410656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410772:1
position: 410772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:411593-411780:1:exon

position:411593:1
position: 411593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411780:1
position: 411780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:411978-412100:1:exon

position:411978:1
position: 411978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412100:1
position: 412100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:412554-412655:1:exon

position:412554:1
position: 412554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412655:1
position: 412655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:414576-417620:1:exon

position:414576:1
position: 414576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

B4GALT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: B4GALT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-1,4-galactosyltransferase 5
translation: MRWPRGPRGAWRLLPRRSLLAALFLFSLSSSFLYFVYVAPGIVNTYLFMMQAQGIMIRENMRTIGAQVYEQVVRSAYAKRNSSVNDSDYPLDLNHNETFLQATTFLPEDFTYFPNHTCPERLPSMKGPIDVNMSEITMEDIHQFFSKDPSIKLGGHWKPSDCLPRWKVAILIPFRNRYEHLPVLFRHLIPMLQRQRLQFAFYVVEQAGNQPFNRAMLFNVGFREAMKDLDWDCLIFHDVDHIPENDRNYYGCGQMPRHFAAKLDKYMYLLPYNEFFGGVSGLTVEQFQKINGFPNAFWGWGGEDDDLWNRVQYAGYSVTRPEGDTGKYKSIPHHHRGEVQFLGRYALLRKSKERQALDGLNNLNYFPNVTYDALYKNITVNLTPELALVTEY
SIO_010081: B4GALT5
subclass of: SO_0000673
so part of: B4GALT5
location: join(385356..385482,405811..405945,409212..409325,410138..410262,410656..410772,411593..411780,411978..412100,412554..412655,414576..414723)
location: region:385356-414723:1
so has part: feature:385356-385482:1:exon
so has part: feature:405811-405945:1:exon
so has part: feature:409212-409325:1:exon
so has part: feature:410138-410262:1:exon
so has part: feature:410656-410772:1:exon
so has part: feature:411593-411780:1:exon
so has part: feature:411978-412100:1:exon
so has part: feature:412554-412655:1:exon
so has part: feature:414576-414723:1:exon

XP_032054152.1
type: Protein
SIO_000068: ncbiprotein

position:385356:1
position: 385356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414723:1
position: 414723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385356-385482:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405811-405945:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:409212-409325:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:410138-410262:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:410656-410772:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:411593-411780:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:411978-412100:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:412554-412655:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:414576-414723:1:exon

KCNB1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: KCNB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 441331..555447
location: region:441331-555447:1
so has part: feature:441331-555447:1:exon
subclass of: SO_0000010

116495545
type: Gene
SIO_000068: ncbigene

position:441331:1
position: 441331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555447:1
position: 555447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441331-555447:1:exon

KCNB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: KCNB1
product: potassium voltage-gated channel subfamily B member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198089.1
SIO_010081: KCNB1
subclass of: SO_0000673
so part of: KCNB1
location: join(441331..442047,552115..555447)
location: region:441331-555447:1
so has part: feature:441331-442047:1:exon
so has part: feature:552115-555447:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441331-442047:1:exon

position:442047:1
position: 442047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:552115-555447:1:exon

position:552115:1
position: 552115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: KCNB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily B member 1
translation: MPLGMNKHGSRSTTSLPPDPTEIVRSKACSRRVKLNVGGLAHEVLWRTLDRLPRTRLGKLRDCNTHDSLMEICDDYNLEENEYFFDRHPGAFTSILNFYRTGKLHMMEEMCALSFSQELDYWGVDEIYLESCCQARYHQKKEQMNEELKREAETLREREGEEFDNTCCADKRKKLWDLLEKPNSSVAAKILAIISIMFIVLSTIALSLNTLPELQGMDEFGQTTDNPQLAHVEAVCIAWFTMEYLLRFLSSPKKWKFFKGPLNAIDLLAILPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFFAEKDEDDTKFKSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIVSMNMKDAFARSIELMDIVVEKNGESIAKKDKVQDNHLSPSKWKWTKRTLSETSSSKSFETKEQGSPEKARSSSSPQHLNVQQLEDMYNKMAKTQSQPNLNTKESNQPGKQKEELEMETLPGPMVPLLTTRADGIIDMRSMSSIDSFISCAAEFPDSGRFSHSPLATLPCKGGINVIQEQSRGEGSGTRFVEINPSSEGSHHSAFFIESPKSSIKASNPLKLRSLKVNFMEEDTSTLVPASNVLRIYPDTLKGRGAAAAATDTSLLSDRSLMSPETSIYTTASARTPPKSPETQTAIAFNFHDAGIHKYIDADTDDEGQLLYDSSPPGNVSPKYNVTNSGYLKQKDNVYRTEKNHLEAAALPTSPKLIGQNCIYSMEGITGRTQGHQETVRLENHISPEVHVLPGSGGHANTHDQNI
SIO_010081: KCNB1
subclass of: SO_0000673
so part of: KCNB1
location: join(441481..442047,552115..554136)
location: region:441481-554136:1
so has part: feature:441481-442047:1:exon
so has part: feature:552115-554136:1:exon

XP_032053980.1
type: Protein
SIO_000068: ncbiprotein

position:441481:1
position: 441481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554136:1
position: 554136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441481-442047:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:552115-554136:1:exon

LOC116495783
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116495783
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(584144..597283)
location: region:584144-597283:-1
so has part: feature:584144-597283:-1:exon
subclass of: SO_0000010

116495783
type: Gene
SIO_000068: ncbigene

position:584144:-1
position: 584144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597283:-1
position: 597283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584144-597283:-1:exon

LOC116495783
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116495783
product: somatomedin-B and thrombospondin type-1 domain-containing protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032198494.1
SIO_010081: LOC116495783
subclass of: SO_0000673
so part of: LOC116495783
location: complement(join(584144..585023,589915..590091,592458..592536,593480..593674,597067..597283))
location: region:584144-597283:-1
so has part: feature:597067-597283:-1:exon
so has part: feature:593480-593674:-1:exon
so has part: feature:592458-592536:-1:exon
so has part: feature:589915-590091:-1:exon
so has part: feature:584144-585023:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:597067-597283:-1:exon

position:597067:-1
position: 597067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:593480-593674:-1:exon

position:593480:-1
position: 593480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593674:-1
position: 593674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:592458-592536:-1:exon

position:592458:-1
position: 592458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592536:-1
position: 592536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:589915-590091:-1:exon

position:589915:-1
position: 589915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590091:-1
position: 590091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:584144-585023:-1:exon

position:585023:-1
position: 585023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116495783
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116495783
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: somatomedin-B and thrombospondin type-1 domain-containing protein-like
translation: MPGRAAALVLALLALPRRAAAGCAALGLCCPGRDPSCVGTGWRPDGSYGPCYCDQACEHTLDCCHDYARACPVMPCVVSQWSVWSGCAEPCKTTYRVRRRHVIQEPRNGGEVCPPLEERAGCVEYWTQQGTECKQYLIPALITTGGFGKARKKRAADDGNERVGYCVEFQIVAITPACLHSHYSYTHWMQYLREGHTVCVECQHPALDSKSLHCYGDGSGSIKNQLLHWQAVGNPQCRGTWKRIRQLDTCSCPSVHSFLFI
SIO_010081: LOC116495783
subclass of: SO_0000673
so part of: LOC116495783
location: complement(join(584906..585023,589915..590091,592458..592536,593480..593674,597067..597283))
location: region:584906-597283:-1
so has part: feature:597067-597283:-1:exon
so has part: feature:593480-593674:-1:exon
so has part: feature:592458-592536:-1:exon
so has part: feature:589915-590091:-1:exon
so has part: feature:584906-585023:-1:exon

XP_032054385.1
type: Protein
SIO_000068: ncbiprotein

position:584906:-1
position: 584906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597067-597283:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:593480-593674:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:592458-592536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:589915-590091:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584906-585023:-1:exon

LOC116495636
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116495636
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(614005..618826)
location: region:614005-618826:-1
so has part: feature:614005-618826:-1:exon
subclass of: SO_0000011

116495636
type: Gene
SIO_000068: ncbigene

position:614005:-1
position: 614005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618826:-1
position: 618826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614005-618826:-1:exon

LOC116495636
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116495636
product: uncharacterized LOC116495636, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004253959.1
SIO_010081: LOC116495636
subclass of: SO_0000673
so part of: LOC116495636
location: complement(join(614005..614578,616049..616172,617635..617770,618801..618826))
location: region:614005-618826:-1
so has part: feature:618801-618826:-1:exon
so has part: feature:617635-617770:-1:exon
so has part: feature:616049-616172:-1:exon
so has part: feature:614005-614578:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:618801-618826:-1:exon

position:618801:-1
position: 618801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:617635-617770:-1:exon

position:617635:-1
position: 617635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617770:-1
position: 617770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:616049-616172:-1:exon

position:616049:-1
position: 616049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616172:-1
position: 616172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:614005-614578:-1:exon

position:614578:-1
position: 614578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116495636
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116495636
product: uncharacterized LOC116495636, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004253958.1
SIO_010081: LOC116495636
subclass of: SO_0000673
so part of: LOC116495636
location: complement(join(614005..614578,616049..616172,616685..616809))
location: region:614005-616809:-1
so has part: feature:616685-616809:-1:exon
so has part: feature:616049-616172:-1:exon
so has part: feature:614005-614578:-1:exon

position:616809:-1
position: 616809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616685-616809:-1:exon

position:616685:-1
position: 616685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:616049-616172:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:614005-614578:-1:exon

LOC116495933
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116495933
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(615607..615700)
location: region:615607-615700:-1
so has part: feature:615607-615700:-1:exon
subclass of: SO_0000578

116495933
type: Gene
SIO_000068: ncbigene

position:615607:-1
position: 615607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615700:-1
position: 615700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615607-615700:-1:exon

LOC116495933
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: snoRNA
gene: LOC116495933
product: small nucleolar SNORD12/SNORD106
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00581
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004253975.1
SIO_010081: LOC116495933
subclass of: SO_0000673
so part of: LOC116495933
location: complement(615607..615700)
location: region:615607-615700:-1
so has part: feature:615607-615700:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:615607-615700:-1:exon

LOC116495935
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116495935
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(616244..616335)
location: region:616244-616335:-1
so has part: feature:616244-616335:-1:exon
subclass of: SO_0000578

116495935
type: Gene
SIO_000068: ncbigene

position:616244:-1
position: 616244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616335:-1
position: 616335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616244-616335:-1:exon

LOC116495935
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: snoRNA
gene: LOC116495935
product: small nucleolar SNORD12/SNORD106
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00581
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004253977.1
SIO_010081: LOC116495935
subclass of: SO_0000673
so part of: LOC116495935
location: complement(616244..616335)
location: region:616244-616335:-1
so has part: feature:616244-616335:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:616244-616335:-1:exon

LOC116495932
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116495932
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(616885..616975)
location: region:616885-616975:-1
so has part: feature:616885-616975:-1:exon
subclass of: SO_0000578

116495932
type: Gene
SIO_000068: ncbigene

position:616885:-1
position: 616885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616975:-1
position: 616975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616885-616975:-1:exon

LOC116495932
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: snoRNA
gene: LOC116495932
product: small nucleolar SNORD12/SNORD106
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00581
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004253974.1
SIO_010081: LOC116495932
subclass of: SO_0000673
so part of: LOC116495932
location: complement(616885..616975)
location: region:616885-616975:-1
so has part: feature:616885-616975:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:616885-616975:-1:exon

LOC116495936
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116495936
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(617842..617933)
location: region:617842-617933:-1
so has part: feature:617842-617933:-1:exon
subclass of: SO_0000578

116495936
type: Gene
SIO_000068: ncbigene

position:617842:-1
position: 617842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617933:-1
position: 617933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:617842-617933:-1:exon

LOC116495936
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: snoRNA
gene: LOC116495936
product: small nucleolar SNORD12/SNORD106
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00581
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004253978.1
SIO_010081: LOC116495936
subclass of: SO_0000673
so part of: LOC116495936
location: complement(617842..617933)
location: region:617842-617933:-1
so has part: feature:617842-617933:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:617842-617933:-1:exon

LOC116495937
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116495937
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(618999..619090)
location: region:618999-619090:-1
so has part: feature:618999-619090:-1:exon
subclass of: SO_0000578

116495937
type: Gene
SIO_000068: ncbigene

position:618999:-1
position: 618999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619090:-1
position: 619090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618999-619090:-1:exon

LOC116495937
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: snoRNA
gene: LOC116495937
product: small nucleolar SNORD12/SNORD106
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00581
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004253979.1
SIO_010081: LOC116495937
subclass of: SO_0000673
so part of: LOC116495937
location: complement(618999..619090)
location: region:618999-619090:-1
so has part: feature:618999-619090:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:618999-619090:-1:exon

STAU1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: STAU1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(622667..659551)
location: region:622667-659551:-1
so has part: feature:622667-659551:-1:exon
subclass of: SO_0000010

116495534
type: Gene
SIO_000068: ncbigene

position:622667:-1
position: 622667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:659551:-1
position: 659551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622667-659551:-1:exon

STAU1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: STAU1
product: staufen double-stranded RNA binding protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198063.1
SIO_010081: STAU1
subclass of: SO_0000673
so part of: STAU1
location: complement(join(622667..629635,630128..630175,630275..630360,631875..631997,632748..633067,634955..635027,635790..635936,636589..636732,637258..637488,638809..638907,644511..644676,645404..645542,646965..647121,648863..648987,649200..649476,659409..659551))
location: region:622667-659551:-1
so has part: feature:659409-659551:-1:exon
so has part: feature:649200-649476:-1:exon
so has part: feature:648863-648987:-1:exon
so has part: feature:646965-647121:-1:exon
so has part: feature:645404-645542:-1:exon
so has part: feature:644511-644676:-1:exon
so has part: feature:638809-638907:-1:exon
so has part: feature:637258-637488:-1:exon
so has part: feature:636589-636732:-1:exon
so has part: feature:635790-635936:-1:exon
so has part: feature:634955-635027:-1:exon
so has part: feature:632748-633067:-1:exon
so has part: feature:631875-631997:-1:exon
so has part: feature:630275-630360:-1:exon
so has part: feature:630128-630175:-1:exon
so has part: feature:622667-629635:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:659409-659551:-1:exon

position:659409:-1
position: 659409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:649200-649476:-1:exon

position:649200:-1
position: 649200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:649476:-1
position: 649476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:648863-648987:-1:exon

position:648863:-1
position: 648863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648987:-1
position: 648987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:646965-647121:-1:exon

position:646965:-1
position: 646965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:647121:-1
position: 647121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:645404-645542:-1:exon

position:645404:-1
position: 645404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645542:-1
position: 645542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:644511-644676:-1:exon

position:644511:-1
position: 644511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644676:-1
position: 644676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:638809-638907:-1:exon

position:638809:-1
position: 638809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638907:-1
position: 638907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:637258-637488:-1:exon

position:637258:-1
position: 637258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637488:-1
position: 637488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:636589-636732:-1:exon

position:636589:-1
position: 636589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636732:-1
position: 636732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:635790-635936:-1:exon

position:635790:-1
position: 635790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635936:-1
position: 635936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:634955-635027:-1:exon

position:634955:-1
position: 634955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635027:-1
position: 635027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:632748-633067:-1:exon

position:632748:-1
position: 632748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633067:-1
position: 633067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:631875-631997:-1:exon

position:631875:-1
position: 631875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631997:-1
position: 631997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:630275-630360:-1:exon

position:630275:-1
position: 630275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630360:-1
position: 630360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:630128-630175:-1:exon

position:630128:-1
position: 630128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630175:-1
position: 630175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:622667-629635:-1:exon

position:629635:-1
position: 629635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STAU1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: STAU1
product: staufen double-stranded RNA binding protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198064.1
SIO_010081: STAU1
subclass of: SO_0000673
so part of: STAU1
location: complement(join(622667..629635,630128..630175,630275..630360,631875..631997,632748..633067,634955..635027,635790..635936,636589..636732,637258..637470,638809..638907,644511..644676,645404..645542,646965..647121,648863..648987,649200..649476,654600..654666,659409..659551))
location: region:622667-659551:-1
so has part: feature:659409-659551:-1:exon
so has part: feature:654600-654666:-1:exon
so has part: feature:649200-649476:-1:exon
so has part: feature:648863-648987:-1:exon
so has part: feature:646965-647121:-1:exon
so has part: feature:645404-645542:-1:exon
so has part: feature:644511-644676:-1:exon
so has part: feature:638809-638907:-1:exon
so has part: feature:637258-637470:-1:exon
so has part: feature:636589-636732:-1:exon
so has part: feature:635790-635936:-1:exon
so has part: feature:634955-635027:-1:exon
so has part: feature:632748-633067:-1:exon
so has part: feature:631875-631997:-1:exon
so has part: feature:630275-630360:-1:exon
so has part: feature:630128-630175:-1:exon
so has part: feature:622667-629635:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:659409-659551:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:654600-654666:-1:exon

position:654600:-1
position: 654600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654666:-1
position: 654666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:649200-649476:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:648863-648987:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:646965-647121:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:645404-645542:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:644511-644676:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:638809-638907:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:637258-637470:-1:exon

position:637470:-1
position: 637470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:636589-636732:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:635790-635936:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:634955-635027:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:632748-633067:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:631875-631997:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:630275-630360:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:630128-630175:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:622667-629635:-1:exon

STAU1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: STAU1
product: staufen double-stranded RNA binding protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198062.1
SIO_010081: STAU1
subclass of: SO_0000673
so part of: STAU1
location: complement(join(622667..629635,630128..630175,630275..630360,631875..631997,632748..633067,634955..635027,635790..635936,636589..636732,637258..637488,638809..638907,644511..644676,645404..645542,646965..647121,648863..648987,649200..649476,654600..654666,659409..659551))
location: region:622667-659551:-1
so has part: feature:659409-659551:-1:exon
so has part: feature:654600-654666:-1:exon
so has part: feature:649200-649476:-1:exon
so has part: feature:648863-648987:-1:exon
so has part: feature:646965-647121:-1:exon
so has part: feature:645404-645542:-1:exon
so has part: feature:644511-644676:-1:exon
so has part: feature:638809-638907:-1:exon
so has part: feature:637258-637488:-1:exon
so has part: feature:636589-636732:-1:exon
so has part: feature:635790-635936:-1:exon
so has part: feature:634955-635027:-1:exon
so has part: feature:632748-633067:-1:exon
so has part: feature:631875-631997:-1:exon
so has part: feature:630275-630360:-1:exon
so has part: feature:630128-630175:-1:exon
so has part: feature:622667-629635:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:659409-659551:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:654600-654666:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649200-649476:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:648863-648987:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:646965-647121:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:645404-645542:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:644511-644676:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:638809-638907:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:637258-637488:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:636589-636732:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:635790-635936:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:634955-635027:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:632748-633067:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:631875-631997:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:630275-630360:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:630128-630175:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:622667-629635:-1:exon

STAU1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: STAU1
product: staufen double-stranded RNA binding protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198066.1
SIO_010081: STAU1
subclass of: SO_0000673
so part of: STAU1
location: complement(join(622667..629635,630275..630360,631875..631997,632748..633067,634955..635027,635790..635936,636589..636732,637258..637470,638809..638907,644511..644676,645404..645542,646965..647121,648863..648987,649200..649476,654600..654666,659409..659550))
location: region:622667-659550:-1
so has part: feature:659409-659550:-1:exon
so has part: feature:654600-654666:-1:exon
so has part: feature:649200-649476:-1:exon
so has part: feature:648863-648987:-1:exon
so has part: feature:646965-647121:-1:exon
so has part: feature:645404-645542:-1:exon
so has part: feature:644511-644676:-1:exon
so has part: feature:638809-638907:-1:exon
so has part: feature:637258-637470:-1:exon
so has part: feature:636589-636732:-1:exon
so has part: feature:635790-635936:-1:exon
so has part: feature:634955-635027:-1:exon
so has part: feature:632748-633067:-1:exon
so has part: feature:631875-631997:-1:exon
so has part: feature:630275-630360:-1:exon
so has part: feature:622667-629635:-1:exon

position:659550:-1
position: 659550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:659409-659550:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:654600-654666:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649200-649476:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:648863-648987:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:646965-647121:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:645404-645542:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:644511-644676:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:638809-638907:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:637258-637470:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:636589-636732:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:635790-635936:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:634955-635027:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:632748-633067:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:631875-631997:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:630275-630360:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:622667-629635:-1:exon

STAU1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: STAU1
product: staufen double-stranded RNA binding protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198065.1
SIO_010081: STAU1
subclass of: SO_0000673
so part of: STAU1
location: complement(join(622667..629635,630275..630360,631875..631997,632748..633067,634955..635027,635790..635936,636589..636732,637258..637488,638809..638907,644511..644676,645404..645542,646965..647121,648863..648987,649200..649476,654600..654666,659409..659550))
location: region:622667-659550:-1
so has part: feature:659409-659550:-1:exon
so has part: feature:654600-654666:-1:exon
so has part: feature:649200-649476:-1:exon
so has part: feature:648863-648987:-1:exon
so has part: feature:646965-647121:-1:exon
so has part: feature:645404-645542:-1:exon
so has part: feature:644511-644676:-1:exon
so has part: feature:638809-638907:-1:exon
so has part: feature:637258-637488:-1:exon
so has part: feature:636589-636732:-1:exon
so has part: feature:635790-635936:-1:exon
so has part: feature:634955-635027:-1:exon
so has part: feature:632748-633067:-1:exon
so has part: feature:631875-631997:-1:exon
so has part: feature:630275-630360:-1:exon
so has part: feature:622667-629635:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:659409-659550:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:654600-654666:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649200-649476:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:648863-648987:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:646965-647121:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:645404-645542:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:644511-644676:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:638809-638907:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:637258-637488:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:636589-636732:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:635790-635936:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:634955-635027:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:632748-633067:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:631875-631997:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:630275-630360:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:622667-629635:-1:exon

STAU1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: STAU1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: double-stranded RNA-binding protein Staufen homolog 1 isoform X4
translation: MSQVQIQNPSTALAGSQILNKNPSLSQPLSIPSTTSSLPSENAGRPIQNSALPSASVTSTNAAAAPSNMANPKEKTPMCLVNELARFNKIQPEYKLLSEQGPAHSKVFTVQLTLGDQHWEAEGTSIKKAQHAAAAKALEGTKFPKPTARPSRSEGKNPDSVTPTVELNALCMKLGKKPMYKPIDPYTGMRSTYNYTMRGGTYPPRYFYPFPVGPLLYQVELSIGGQQFHGKGRTRQAAKHDAAAKALKVLQNEPLPEKPEVNGKEPDDENLNKSEISQVFEIALKRNLPVNFEVTKESGPPHMKSFVTKVSVGEFMGEGEGKSKKISKKNAAIAVLEELKKLPPLPTVEKMKPRIKKKTKSIVKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYMLITERGLPRRREFVMQVKVGVHTAEGMGTNKKVAKRNAAENMLEILGFKIPQPQPPKPALKTEEKTPVKKPGDGRKVTFFEPGSEETSTSNKEDEFRMPYLSHQQLPAGILPMVPEVAQAVGANQGHHTKEFNRAAPNPAKATVTAMIARELLYGGTSPTAETILKNNNSSGHVPHGPLTRPSEQLDYLSNVQGIQVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLSELDQQTTEMPRTGNGPMSVCVKQEMESDPLLKPANSNTLGQTLDSTA
SIO_010081: STAU1
subclass of: SO_0000673
so part of: STAU1
location: complement(join(629548..629635,630275..630360,631875..631997,632748..633067,634955..635027,635790..635936,636589..636732,637258..637470,638809..638907,644511..644676,645404..645542,646965..647121,648863..648987,649200..649392))
location: region:629548-649392:-1
so has part: feature:649200-649392:-1:exon
so has part: feature:648863-648987:-1:exon
so has part: feature:646965-647121:-1:exon
so has part: feature:645404-645542:-1:exon
so has part: feature:644511-644676:-1:exon
so has part: feature:638809-638907:-1:exon
so has part: feature:637258-637470:-1:exon
so has part: feature:636589-636732:-1:exon
so has part: feature:635790-635936:-1:exon
so has part: feature:634955-635027:-1:exon
so has part: feature:632748-633067:-1:exon
so has part: feature:631875-631997:-1:exon
so has part: feature:630275-630360:-1:exon
so has part: feature:629548-629635:-1:exon

XP_032053957.1
type: Protein
SIO_000068: ncbiprotein

position:629548:-1
position: 629548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:649392:-1
position: 649392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:649200-649392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:648863-648987:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:646965-647121:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:645404-645542:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:644511-644676:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638809-638907:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637258-637470:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636589-636732:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:635790-635936:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:634955-635027:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:632748-633067:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:631875-631997:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:630275-630360:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:629548-629635:-1:exon

STAU1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: STAU1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: double-stranded RNA-binding protein Staufen homolog 1 isoform X2
translation: MSQVQIQNPSTALAGSQILNKNPSLSQPLSIPSTTSSLPSENAGRPIQNSALPSASVTSTNAAAAPSNMANPKEKTPMCLVNELARFNKIQPEYKLLSEQGPAHSKVFTVQLTLGDQHWEAEGTSIKKAQHAAAAKALEGTKFPKPTARPSRSEGKNPDSVTPTVELNALCMKLGKKPMYKPIDPYTGMRSTYNYTMRGGTYPPRYFYPFPVGPLLYQVELSIGGQQFHGKGRTRQAAKHDAAAKALKVLQNEPLPEKPEVNGKEPDDENLNKSEISQVFEIALKRNLPVNFEVTKESGPPHMKSFVTKVSVGEFMGEGEGKSKKISKKNAAIAVLEELKKLPPLPTVEKMKPRIKKKTKSIVKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYMLITERGLPRRREFVMQVKVGVHTAEGMGTNKKVAKRNAAENMLEILGFKIPQPQPPKPALKTEEKTPVKKPGDGRKVTFFEPGSEETSTSNKEDEFRMPYLSHQQLPAGILPMVPEVAQAVGANQGHHTKEFNRAAPNPAKATVTAMIARELLYGGTSPTAETILKNNNSSGHVPHGPLTRPSEQLDYLSNVQGIQVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLSELDQQTTEMPRTGNGPMSVEVKMPRAVTFFRRMRGCVKQEMESDPLLKPANSNTLGQTLDSTA
SIO_010081: STAU1
subclass of: SO_0000673
so part of: STAU1
location: complement(join(629548..629635,630128..630175,630275..630360,631875..631997,632748..633067,634955..635027,635790..635936,636589..636732,637258..637470,638809..638907,644511..644676,645404..645542,646965..647121,648863..648987,649200..649392))
location: region:629548-649392:-1
so has part: feature:649200-649392:-1:exon
so has part: feature:648863-648987:-1:exon
so has part: feature:646965-647121:-1:exon
so has part: feature:645404-645542:-1:exon
so has part: feature:644511-644676:-1:exon
so has part: feature:638809-638907:-1:exon
so has part: feature:637258-637470:-1:exon
so has part: feature:636589-636732:-1:exon
so has part: feature:635790-635936:-1:exon
so has part: feature:634955-635027:-1:exon
so has part: feature:632748-633067:-1:exon
so has part: feature:631875-631997:-1:exon
so has part: feature:630275-630360:-1:exon
so has part: feature:630128-630175:-1:exon
so has part: feature:629548-629635:-1:exon

XP_032053955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:649200-649392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:648863-648987:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:646965-647121:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:645404-645542:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:644511-644676:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638809-638907:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637258-637470:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636589-636732:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:635790-635936:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:634955-635027:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:632748-633067:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:631875-631997:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:630275-630360:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:630128-630175:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:629548-629635:-1:exon

STAU1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: STAU1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: double-stranded RNA-binding protein Staufen homolog 1 isoform X3
translation: MSQVQIQNPSTALAGSQILNKNPSLSQPLSIPSTTSSLPSENAGRPIQNSALPSASVTSTNAAAAPSNMANPKEKTPMCLVNELARFNKIQPEYKLLSEQGPAHSKVFTVQLTLGDQHWEAEGTSIKKAQHAAAAKALEGTKFPKPTARPSRSEGKNPDSVTPTVELNALCMKLGKKPMYKPIDPYTGMRSTYNYTMRGGTYPPRYFYPFPVGPLLYQVELSIGGQQFHGKGRTRQAAKHDAAAKALKVLQNEPLPEKPEVNGKEPDDENLNKSEISQVFEIALKRNLPVNFEFFPLKQVTKESGPPHMKSFVTKVSVGEFMGEGEGKSKKISKKNAAIAVLEELKKLPPLPTVEKMKPRIKKKTKSIVKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYMLITERGLPRRREFVMQVKVGVHTAEGMGTNKKVAKRNAAENMLEILGFKIPQPQPPKPALKTEEKTPVKKPGDGRKVTFFEPGSEETSTSNKEDEFRMPYLSHQQLPAGILPMVPEVAQAVGANQGHHTKEFNRAAPNPAKATVTAMIARELLYGGTSPTAETILKNNNSSGHVPHGPLTRPSEQLDYLSNVQGIQVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLSELDQQTTEMPRTGNGPMSVCVKQEMESDPLLKPANSNTLGQTLDSTA
SIO_010081: STAU1
subclass of: SO_0000673
so part of: STAU1
location: complement(join(629548..629635,630275..630360,631875..631997,632748..633067,634955..635027,635790..635936,636589..636732,637258..637488,638809..638907,644511..644676,645404..645542,646965..647121,648863..648987,649200..649392))
location: region:629548-649392:-1
so has part: feature:649200-649392:-1:exon
so has part: feature:648863-648987:-1:exon
so has part: feature:646965-647121:-1:exon
so has part: feature:645404-645542:-1:exon
so has part: feature:644511-644676:-1:exon
so has part: feature:638809-638907:-1:exon
so has part: feature:637258-637488:-1:exon
so has part: feature:636589-636732:-1:exon
so has part: feature:635790-635936:-1:exon
so has part: feature:634955-635027:-1:exon
so has part: feature:632748-633067:-1:exon
so has part: feature:631875-631997:-1:exon
so has part: feature:630275-630360:-1:exon
so has part: feature:629548-629635:-1:exon

XP_032053956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:649200-649392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:648863-648987:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:646965-647121:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:645404-645542:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:644511-644676:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638809-638907:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637258-637488:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636589-636732:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:635790-635936:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:634955-635027:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:632748-633067:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:631875-631997:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:630275-630360:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:629548-629635:-1:exon

STAU1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: STAU1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: double-stranded RNA-binding protein Staufen homolog 1 isoform X1
translation: MSQVQIQNPSTALAGSQILNKNPSLSQPLSIPSTTSSLPSENAGRPIQNSALPSASVTSTNAAAAPSNMANPKEKTPMCLVNELARFNKIQPEYKLLSEQGPAHSKVFTVQLTLGDQHWEAEGTSIKKAQHAAAAKALEGTKFPKPTARPSRSEGKNPDSVTPTVELNALCMKLGKKPMYKPIDPYTGMRSTYNYTMRGGTYPPRYFYPFPVGPLLYQVELSIGGQQFHGKGRTRQAAKHDAAAKALKVLQNEPLPEKPEVNGKEPDDENLNKSEISQVFEIALKRNLPVNFEFFPLKQVTKESGPPHMKSFVTKVSVGEFMGEGEGKSKKISKKNAAIAVLEELKKLPPLPTVEKMKPRIKKKTKSIVKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYMLITERGLPRRREFVMQVKVGVHTAEGMGTNKKVAKRNAAENMLEILGFKIPQPQPPKPALKTEEKTPVKKPGDGRKVTFFEPGSEETSTSNKEDEFRMPYLSHQQLPAGILPMVPEVAQAVGANQGHHTKEFNRAAPNPAKATVTAMIARELLYGGTSPTAETILKNNNSSGHVPHGPLTRPSEQLDYLSNVQGIQVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLSELDQQTTEMPRTGNGPMSVEVKMPRAVTFFRRMRGCVKQEMESDPLLKPANSNTLGQTLDSTA
SIO_010081: STAU1
subclass of: SO_0000673
so part of: STAU1
location: complement(join(629548..629635,630128..630175,630275..630360,631875..631997,632748..633067,634955..635027,635790..635936,636589..636732,637258..637488,638809..638907,644511..644676,645404..645542,646965..647121,648863..648987,649200..649392))
location: region:629548-649392:-1
so has part: feature:649200-649392:-1:exon
so has part: feature:648863-648987:-1:exon
so has part: feature:646965-647121:-1:exon
so has part: feature:645404-645542:-1:exon
so has part: feature:644511-644676:-1:exon
so has part: feature:638809-638907:-1:exon
so has part: feature:637258-637488:-1:exon
so has part: feature:636589-636732:-1:exon
so has part: feature:635790-635936:-1:exon
so has part: feature:634955-635027:-1:exon
so has part: feature:632748-633067:-1:exon
so has part: feature:631875-631997:-1:exon
so has part: feature:630275-630360:-1:exon
so has part: feature:630128-630175:-1:exon
so has part: feature:629548-629635:-1:exon

XP_032053953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:649200-649392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:648863-648987:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:646965-647121:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:645404-645542:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:644511-644676:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638809-638907:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637258-637488:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636589-636732:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:635790-635936:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:634955-635027:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:632748-633067:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:631875-631997:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:630275-630360:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:630128-630175:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:629548-629635:-1:exon

STAU1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: STAU1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: double-stranded RNA-binding protein Staufen homolog 1 isoform X1
translation: MSQVQIQNPSTALAGSQILNKNPSLSQPLSIPSTTSSLPSENAGRPIQNSALPSASVTSTNAAAAPSNMANPKEKTPMCLVNELARFNKIQPEYKLLSEQGPAHSKVFTVQLTLGDQHWEAEGTSIKKAQHAAAAKALEGTKFPKPTARPSRSEGKNPDSVTPTVELNALCMKLGKKPMYKPIDPYTGMRSTYNYTMRGGTYPPRYFYPFPVGPLLYQVELSIGGQQFHGKGRTRQAAKHDAAAKALKVLQNEPLPEKPEVNGKEPDDENLNKSEISQVFEIALKRNLPVNFEFFPLKQVTKESGPPHMKSFVTKVSVGEFMGEGEGKSKKISKKNAAIAVLEELKKLPPLPTVEKMKPRIKKKTKSIVKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYMLITERGLPRRREFVMQVKVGVHTAEGMGTNKKVAKRNAAENMLEILGFKIPQPQPPKPALKTEEKTPVKKPGDGRKVTFFEPGSEETSTSNKEDEFRMPYLSHQQLPAGILPMVPEVAQAVGANQGHHTKEFNRAAPNPAKATVTAMIARELLYGGTSPTAETILKNNNSSGHVPHGPLTRPSEQLDYLSNVQGIQVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLSELDQQTTEMPRTGNGPMSVEVKMPRAVTFFRRMRGCVKQEMESDPLLKPANSNTLGQTLDSTA
SIO_010081: STAU1
subclass of: SO_0000673
so part of: STAU1
location: complement(join(629548..629635,630128..630175,630275..630360,631875..631997,632748..633067,634955..635027,635790..635936,636589..636732,637258..637488,638809..638907,644511..644676,645404..645542,646965..647121,648863..648987,649200..649392))
location: region:629548-649392:-1
so has part: feature:649200-649392:-1:exon
so has part: feature:648863-648987:-1:exon
so has part: feature:646965-647121:-1:exon
so has part: feature:645404-645542:-1:exon
so has part: feature:644511-644676:-1:exon
so has part: feature:638809-638907:-1:exon
so has part: feature:637258-637488:-1:exon
so has part: feature:636589-636732:-1:exon
so has part: feature:635790-635936:-1:exon
so has part: feature:634955-635027:-1:exon
so has part: feature:632748-633067:-1:exon
so has part: feature:631875-631997:-1:exon
so has part: feature:630275-630360:-1:exon
so has part: feature:630128-630175:-1:exon
so has part: feature:629548-629635:-1:exon

XP_032053954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:649200-649392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:648863-648987:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:646965-647121:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:645404-645542:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:644511-644676:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638809-638907:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637258-637488:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636589-636732:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:635790-635936:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:634955-635027:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:632748-633067:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:631875-631997:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:630275-630360:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:630128-630175:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:629548-629635:-1:exon

STAU1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: STAU1
product: staufen double-stranded RNA binding protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198067.1
SIO_010081: STAU1
subclass of: SO_0000673
so part of: STAU1
location: complement(join(629620..629635,630128..630170,630275..630360,631875..631997,632748..633067,634955..635027,635790..635936,636589..636732,637258..637488,638809..638907,644511..644676,645404..645542,646965..647121,648863..648987,649200..649476,654600..654666,659409..659551))
location: region:629620-659551:-1
so has part: feature:659409-659551:-1:exon
so has part: feature:654600-654666:-1:exon
so has part: feature:649200-649476:-1:exon
so has part: feature:648863-648987:-1:exon
so has part: feature:646965-647121:-1:exon
so has part: feature:645404-645542:-1:exon
so has part: feature:644511-644676:-1:exon
so has part: feature:638809-638907:-1:exon
so has part: feature:637258-637488:-1:exon
so has part: feature:636589-636732:-1:exon
so has part: feature:635790-635936:-1:exon
so has part: feature:634955-635027:-1:exon
so has part: feature:632748-633067:-1:exon
so has part: feature:631875-631997:-1:exon
so has part: feature:630275-630360:-1:exon
so has part: feature:630128-630170:-1:exon
so has part: feature:629620-629635:-1:exon

position:629620:-1
position: 629620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:659409-659551:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:654600-654666:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649200-649476:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:648863-648987:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:646965-647121:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:645404-645542:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:644511-644676:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:638809-638907:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:637258-637488:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:636589-636732:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:635790-635936:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:634955-635027:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:632748-633067:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:631875-631997:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:630275-630360:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:630128-630170:-1:exon

position:630170:-1
position: 630170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:629620-629635:-1:exon

STAU1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: STAU1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: double-stranded RNA-binding protein Staufen homolog 1 isoform X5
translation: MSQVQIQNPSTALAGSQILNKNPSLSQPLSIPSTTSSLPSENAGRPIQNSALPSASVTSTNAAAAPSNMANPKEKTPMCLVNELARFNKIQPEYKLLSEQGPAHSKVFTVQLTLGDQHWEAEGTSIKKAQHAAAAKALEGTKFPKPTARPSRSEGKNPDSVTPTVELNALCMKLGKKPMYKPIDPYTGMRSTYNYTMRGGTYPPRYFYPFPVGPLLYQVELSIGGQQFHGKGRTRQAAKHDAAAKALKVLQNEPLPEKPEVNGKEPDDENLNKSEISQVFEIALKRNLPVNFEFFPLKQVTKESGPPHMKSFVTKVSVGEFMGEGEGKSKKISKKNAAIAVLEELKKLPPLPTVEKMKPRIKKKTKSIVKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYMLITERGLPRRREFVMQVKVGVHTAEGMGTNKKVAKRNAAENMLEILGFKIPQPQPPKPALKTEEKTPVKKPGDGRKVTFFEPGSEETSTSNKEDEFRMPYLSHQQLPAGILPMVPEVAQAVGANQGHHTKEFNRAAPNPAKATVTAMIARELLYGGTSPTAETILKNNNSSGHVPHGPLTRPSEQLDYLSNVQGIQVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLSELDQQTTEMPRTGNGPMSV
SIO_010081: STAU1
subclass of: SO_0000673
so part of: STAU1
location: complement(join(630167..630170,630275..630360,631875..631997,632748..633067,634955..635027,635790..635936,636589..636732,637258..637488,638809..638907,644511..644676,645404..645542,646965..647121,648863..648987,649200..649392))
location: region:630167-649392:-1
so has part: feature:649200-649392:-1:exon
so has part: feature:648863-648987:-1:exon
so has part: feature:646965-647121:-1:exon
so has part: feature:645404-645542:-1:exon
so has part: feature:644511-644676:-1:exon
so has part: feature:638809-638907:-1:exon
so has part: feature:637258-637488:-1:exon
so has part: feature:636589-636732:-1:exon
so has part: feature:635790-635936:-1:exon
so has part: feature:634955-635027:-1:exon
so has part: feature:632748-633067:-1:exon
so has part: feature:631875-631997:-1:exon
so has part: feature:630275-630360:-1:exon
so has part: feature:630167-630170:-1:exon

XP_032053958.1
type: Protein
SIO_000068: ncbiprotein

position:630167:-1
position: 630167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:649200-649392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:648863-648987:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:646965-647121:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:645404-645542:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:644511-644676:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638809-638907:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637258-637488:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636589-636732:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:635790-635936:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:634955-635027:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:632748-633067:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:631875-631997:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:630275-630360:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:630167-630170:-1:exon

CSE1L
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: CSE1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(660721..688209)
location: region:660721-688209:-1
so has part: feature:660721-688209:-1:exon
subclass of: SO_0000010

116495541
type: Gene
SIO_000068: ncbigene

position:660721:-1
position: 660721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688209:-1
position: 688209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660721-688209:-1:exon

CSE1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: CSE1L
product: chromosome segregation 1 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198075.1
SIO_010081: CSE1L
subclass of: SO_0000673
so part of: CSE1L
location: complement(join(660721..666516,667208..667439,668261..668407,668837..668918,669962..670047,670256..670353,671075..671283,671801..671951,672787..672884,673353..673456,673617..673753,674613..674674,675386..675470,676342..676544,678405..678470,679194..679323,679423..679590,680934..681026,681810..681917,682194..682284,682589..682734,683150..683251,684978..685120,685674..685769,688185..688209))
location: region:660721-688209:-1
so has part: feature:688185-688209:-1:exon
so has part: feature:685674-685769:-1:exon
so has part: feature:684978-685120:-1:exon
so has part: feature:683150-683251:-1:exon
so has part: feature:682589-682734:-1:exon
so has part: feature:682194-682284:-1:exon
so has part: feature:681810-681917:-1:exon
so has part: feature:680934-681026:-1:exon
so has part: feature:679423-679590:-1:exon
so has part: feature:679194-679323:-1:exon
so has part: feature:678405-678470:-1:exon
so has part: feature:676342-676544:-1:exon
so has part: feature:675386-675470:-1:exon
so has part: feature:674613-674674:-1:exon
so has part: feature:673617-673753:-1:exon
so has part: feature:673353-673456:-1:exon
so has part: feature:672787-672884:-1:exon
so has part: feature:671801-671951:-1:exon
so has part: feature:671075-671283:-1:exon
so has part: feature:670256-670353:-1:exon
so has part: feature:669962-670047:-1:exon
so has part: feature:668837-668918:-1:exon
so has part: feature:668261-668407:-1:exon
so has part: feature:667208-667439:-1:exon
so has part: feature:660721-666516:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:688185-688209:-1:exon

position:688185:-1
position: 688185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:685674-685769:-1:exon

position:685674:-1
position: 685674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685769:-1
position: 685769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:684978-685120:-1:exon

position:684978:-1
position: 684978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685120:-1
position: 685120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:683150-683251:-1:exon

position:683150:-1
position: 683150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683251:-1
position: 683251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:682589-682734:-1:exon

position:682589:-1
position: 682589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682734:-1
position: 682734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:682194-682284:-1:exon

position:682194:-1
position: 682194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682284:-1
position: 682284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:681810-681917:-1:exon

position:681810:-1
position: 681810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681917:-1
position: 681917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:680934-681026:-1:exon

position:680934:-1
position: 680934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681026:-1
position: 681026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:679423-679590:-1:exon

position:679423:-1
position: 679423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679590:-1
position: 679590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:679194-679323:-1:exon

position:679194:-1
position: 679194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679323:-1
position: 679323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:678405-678470:-1:exon

position:678405:-1
position: 678405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678470:-1
position: 678470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:676342-676544:-1:exon

position:676342:-1
position: 676342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676544:-1
position: 676544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:675386-675470:-1:exon

position:675386:-1
position: 675386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675470:-1
position: 675470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:674613-674674:-1:exon

position:674613:-1
position: 674613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674674:-1
position: 674674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:673617-673753:-1:exon

position:673617:-1
position: 673617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673753:-1
position: 673753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:673353-673456:-1:exon

position:673353:-1
position: 673353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673456:-1
position: 673456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:672787-672884:-1:exon

position:672787:-1
position: 672787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672884:-1
position: 672884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:671801-671951:-1:exon

position:671801:-1
position: 671801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671951:-1
position: 671951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:671075-671283:-1:exon

position:671075:-1
position: 671075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671283:-1
position: 671283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:670256-670353:-1:exon

position:670256:-1
position: 670256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670353:-1
position: 670353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:669962-670047:-1:exon

position:669962:-1
position: 669962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670047:-1
position: 670047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:668837-668918:-1:exon

position:668837:-1
position: 668837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668918:-1
position: 668918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:668261-668407:-1:exon

position:668261:-1
position: 668261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668407:-1
position: 668407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:667208-667439:-1:exon

position:667208:-1
position: 667208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667439:-1
position: 667439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:660721-666516:-1:exon

position:666516:-1
position: 666516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CSE1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: CSE1L
product: chromosome segregation 1 like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198078.1
SIO_010081: CSE1L
subclass of: SO_0000673
so part of: CSE1L
location: complement(join(660721..666516,667208..667439,668261..668407,668837..668918,669962..670047,670256..670353,671075..671283,671801..671951,672787..672884,673353..673456,673617..673753,674613..674674,675386..675470,676342..676544,678405..678470,679194..679323,679423..679590,680934..681026,681810..681917,682194..682284,682589..682734,683150..683251,684978..685120,685674..685769,687947..687965))
location: region:660721-687965:-1
so has part: feature:687947-687965:-1:exon
so has part: feature:685674-685769:-1:exon
so has part: feature:684978-685120:-1:exon
so has part: feature:683150-683251:-1:exon
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so has part: feature:680934-681026:-1:exon
so has part: feature:679423-679590:-1:exon
so has part: feature:679194-679323:-1:exon
so has part: feature:678405-678470:-1:exon
so has part: feature:676342-676544:-1:exon
so has part: feature:675386-675470:-1:exon
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so has part: feature:668261-668407:-1:exon
so has part: feature:667208-667439:-1:exon
so has part: feature:660721-666516:-1:exon

position:687965:-1
position: 687965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:687947-687965:-1:exon

position:687947:-1
position: 687947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:685674-685769:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:684978-685120:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:683150-683251:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682589-682734:-1:exon

urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
SIO_000628: feature:681810-681917:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:680934-681026:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:679423-679590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:679194-679323:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:678405-678470:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:676342-676544:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:675386-675470:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:674613-674674:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:673617-673753:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:673353-673456:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:672787-672884:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:671801-671951:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:671075-671283:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:670256-670353:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:669962-670047:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:668837-668918:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:668261-668407:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:667208-667439:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:660721-666516:-1:exon

CSE1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: CSE1L
product: chromosome segregation 1 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032198076.1
SIO_010081: CSE1L
subclass of: SO_0000673
so part of: CSE1L
location: complement(join(660721..666516,667208..667439,668261..668407,668837..668918,669962..670047,670256..670353,671075..671283,671801..671951,672787..672884,673353..673456,673617..673753,674613..674674,675386..675470,676342..676544,678405..678470,679194..679323,679423..679590,680934..681026,681810..681917,682194..682284,682589..682734,683150..683251,684978..685120,685674..685769,687432..687599))
location: region:660721-687599:-1
so has part: feature:687432-687599:-1:exon
so has part: feature:685674-685769:-1:exon
so has part: feature:684978-685120:-1:exon
so has part: feature:683150-683251:-1:exon
so has part: feature:682589-682734:-1:exon
so has part: feature:682194-682284:-1:exon
so has part: feature:681810-681917:-1:exon
so has part: feature:680934-681026:-1:exon
so has part: feature:679423-679590:-1:exon
so has part: feature:679194-679323:-1:exon
so has part: feature:678405-678470:-1:exon
so has part: feature:676342-676544:-1:exon
so has part: feature:675386-675470:-1:exon
so has part: feature:674613-674674:-1:exon
so has part: feature:673617-673753:-1:exon
so has part: feature:673353-673456:-1:exon
so has part: feature:672787-672884:-1:exon
so has part: feature:671801-671951:-1:exon
so has part: feature:671075-671283:-1:exon
so has part: feature:670256-670353:-1:exon
so has part: feature:669962-670047:-1:exon
so has part: feature:668837-668918:-1:exon
so has part: feature:668261-668407:-1:exon
so has part: feature:667208-667439:-1:exon
so has part: feature:660721-666516:-1:exon

position:687599:-1
position: 687599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:687432-687599:-1:exon

position:687432:-1
position: 687432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:685674-685769:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:684978-685120:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:683150-683251:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682589-682734:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:682194-682284:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:681810-681917:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:680934-681026:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:679423-679590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:679194-679323:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:678405-678470:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:676342-676544:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:675386-675470:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:674613-674674:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:673617-673753:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:673353-673456:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:672787-672884:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:671801-671951:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:671075-671283:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:670256-670353:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:669962-670047:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:668837-668918:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:668261-668407:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:667208-667439:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:660721-666516:-1:exon

CSE1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: CSE1L
product: chromosome segregation 1 like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198077.1
SIO_010081: CSE1L
subclass of: SO_0000673
so part of: CSE1L
location: complement(join(660721..666516,667208..667439,668261..668407,668837..668918,669962..670047,670256..670353,671075..671283,671801..671951,672787..672884,673353..673456,673617..673753,674613..674674,675386..675470,676342..676544,678405..678470,679194..679323,679423..679590,680934..681026,681810..681917,682194..682284,682589..682734,683150..683251,684978..685120,685674..685769,687373..687414))
location: region:660721-687414:-1
so has part: feature:687373-687414:-1:exon
so has part: feature:685674-685769:-1:exon
so has part: feature:684978-685120:-1:exon
so has part: feature:683150-683251:-1:exon
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so has part: feature:682194-682284:-1:exon
so has part: feature:681810-681917:-1:exon
so has part: feature:680934-681026:-1:exon
so has part: feature:679423-679590:-1:exon
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so has part: feature:676342-676544:-1:exon
so has part: feature:675386-675470:-1:exon
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so has part: feature:673617-673753:-1:exon
so has part: feature:673353-673456:-1:exon
so has part: feature:672787-672884:-1:exon
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so has part: feature:670256-670353:-1:exon
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so has part: feature:668837-668918:-1:exon
so has part: feature:668261-668407:-1:exon
so has part: feature:667208-667439:-1:exon
so has part: feature:660721-666516:-1:exon

position:687414:-1
position: 687414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:687373-687414:-1:exon

position:687373:-1
position: 687373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:685674-685769:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:684978-685120:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:683150-683251:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682589-682734:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:682194-682284:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:681810-681917:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:680934-681026:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:679423-679590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:679194-679323:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:678405-678470:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:676342-676544:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:675386-675470:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:674613-674674:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:673617-673753:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:673353-673456:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:672787-672884:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:671801-671951:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:671075-671283:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:670256-670353:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:669962-670047:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:668837-668918:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:668261-668407:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:667208-667439:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:660721-666516:-1:exon

CSE1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: CSE1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exportin-2
translation: MELSDANLQTLTEYLKKTLDPDPAIRRPAEKFLESVEGSQNYPLLLLTLLEKSQENVIKVCASVTFKNYIKRNWRIVEDEPNKICESDRIAIKANIVPLMLSSPEQIQKQLSDAISIIGREDFPQKWPDLLTEMVNRFQSGDFHVINGVLRTAHSLFKRYRHEFKSNELWTEIKLVLDAFALPLTNLFKATIELCSTHANDASALKVLFSSLILIAKLFYSLNFQDLPEFFEDNMETWMTNFHTLLTLDNKLLQTDDEEEAGLLELLKSQICDNAALYAQKYDEEFQPYLPRFVTAIWNLLVTTGQEVKYDLLVSNAIQFLASVCERPHYKHLFEDQNTLTSICEKVIVPNMEFRAADEEAFEDNSEEYIRRDLEGSDIDTRRRAACDLVRGLCKFFEGPVTGIFSGYVNSMLQEYAKNPSVNWKHKDAAIYLVTSLASKAQTQKHGITQANELVNLTEFFVNHIQPDLKSPSVNEFPVLKADGIKYIMIFRSQVPKEQLLLSIPLLINHLQAESIVVHTYAAHALERLFTMRGTNNSILITAAEMAPFVEVLLTNLFKALTLPGSSENEYIMKAIMRSFSLLQESIIPYIPSVITQLTQKLLAVSKNPSKPHFNHYMFESICLSIRITCKANPDAVGSFEEALFMVFTEILQNDVQEFIPYVFQVMSLLLEMHKNEIPSSYMALFPHLLQPVLWERTGNIPPLVRLLQAYLERGANTIASAAADKIPGLLGVFQKLIASKANDHQGFYLLNSIIEHMPPESVDQYRKQIFILLFQRLQNSKTTKFIKSFLVFINLYCIKYGALALQEIFDSIQPKMFGMVLEKIIIPEIQKVSGQVEKKICAVGITKILTECPPMMDTEYTKLWTPLLQALIGLFELPEDDTIPDEEHFIDIEDTPGYQTAFSQLAFAGKKEHDPVGQMVNNPRIHLAQSLHKLSTACPGRVPSMLSTSLNAEALQYLQGYLQAASVTLL
SIO_010081: CSE1L
subclass of: SO_0000673
so part of: CSE1L
location: complement(join(666427..666516,667208..667439,668261..668407,668837..668918,669962..670047,670256..670353,671075..671283,671801..671951,672787..672884,673353..673456,673617..673753,674613..674674,675386..675470,676342..676544,678405..678470,679194..679323,679423..679590,680934..681026,681810..681917,682194..682284,682589..682734,683150..683251,684978..685120,685674..685758))
location: region:666427-685758:-1
so has part: feature:685674-685758:-1:exon
so has part: feature:684978-685120:-1:exon
so has part: feature:683150-683251:-1:exon
so has part: feature:682589-682734:-1:exon
so has part: feature:682194-682284:-1:exon
so has part: feature:681810-681917:-1:exon
so has part: feature:680934-681026:-1:exon
so has part: feature:679423-679590:-1:exon
so has part: feature:679194-679323:-1:exon
so has part: feature:678405-678470:-1:exon
so has part: feature:676342-676544:-1:exon
so has part: feature:675386-675470:-1:exon
so has part: feature:674613-674674:-1:exon
so has part: feature:673617-673753:-1:exon
so has part: feature:673353-673456:-1:exon
so has part: feature:672787-672884:-1:exon
so has part: feature:671801-671951:-1:exon
so has part: feature:671075-671283:-1:exon
so has part: feature:670256-670353:-1:exon
so has part: feature:669962-670047:-1:exon
so has part: feature:668837-668918:-1:exon
so has part: feature:668261-668407:-1:exon
so has part: feature:667208-667439:-1:exon
so has part: feature:666427-666516:-1:exon

XP_032053966.1
type: Protein
SIO_000068: ncbiprotein

position:666427:-1
position: 666427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685758:-1
position: 685758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685674-685758:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:684978-685120:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:683150-683251:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682589-682734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682194-682284:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681810-681917:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:680934-681026:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:679423-679590:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:679194-679323:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:678405-678470:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:676342-676544:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:675386-675470:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:674613-674674:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:673617-673753:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:673353-673456:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:672787-672884:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:671801-671951:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:671075-671283:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:670256-670353:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:669962-670047:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:668837-668918:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:668261-668407:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:667208-667439:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:666427-666516:-1:exon

CSE1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: CSE1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exportin-2
translation: MELSDANLQTLTEYLKKTLDPDPAIRRPAEKFLESVEGSQNYPLLLLTLLEKSQENVIKVCASVTFKNYIKRNWRIVEDEPNKICESDRIAIKANIVPLMLSSPEQIQKQLSDAISIIGREDFPQKWPDLLTEMVNRFQSGDFHVINGVLRTAHSLFKRYRHEFKSNELWTEIKLVLDAFALPLTNLFKATIELCSTHANDASALKVLFSSLILIAKLFYSLNFQDLPEFFEDNMETWMTNFHTLLTLDNKLLQTDDEEEAGLLELLKSQICDNAALYAQKYDEEFQPYLPRFVTAIWNLLVTTGQEVKYDLLVSNAIQFLASVCERPHYKHLFEDQNTLTSICEKVIVPNMEFRAADEEAFEDNSEEYIRRDLEGSDIDTRRRAACDLVRGLCKFFEGPVTGIFSGYVNSMLQEYAKNPSVNWKHKDAAIYLVTSLASKAQTQKHGITQANELVNLTEFFVNHIQPDLKSPSVNEFPVLKADGIKYIMIFRSQVPKEQLLLSIPLLINHLQAESIVVHTYAAHALERLFTMRGTNNSILITAAEMAPFVEVLLTNLFKALTLPGSSENEYIMKAIMRSFSLLQESIIPYIPSVITQLTQKLLAVSKNPSKPHFNHYMFESICLSIRITCKANPDAVGSFEEALFMVFTEILQNDVQEFIPYVFQVMSLLLEMHKNEIPSSYMALFPHLLQPVLWERTGNIPPLVRLLQAYLERGANTIASAAADKIPGLLGVFQKLIASKANDHQGFYLLNSIIEHMPPESVDQYRKQIFILLFQRLQNSKTTKFIKSFLVFINLYCIKYGALALQEIFDSIQPKMFGMVLEKIIIPEIQKVSGQVEKKICAVGITKILTECPPMMDTEYTKLWTPLLQALIGLFELPEDDTIPDEEHFIDIEDTPGYQTAFSQLAFAGKKEHDPVGQMVNNPRIHLAQSLHKLSTACPGRVPSMLSTSLNAEALQYLQGYLQAASVTLL
SIO_010081: CSE1L
subclass of: SO_0000673
so part of: CSE1L
location: complement(join(666427..666516,667208..667439,668261..668407,668837..668918,669962..670047,670256..670353,671075..671283,671801..671951,672787..672884,673353..673456,673617..673753,674613..674674,675386..675470,676342..676544,678405..678470,679194..679323,679423..679590,680934..681026,681810..681917,682194..682284,682589..682734,683150..683251,684978..685120,685674..685758))
location: region:666427-685758:-1
so has part: feature:685674-685758:-1:exon
so has part: feature:684978-685120:-1:exon
so has part: feature:683150-683251:-1:exon
so has part: feature:682589-682734:-1:exon
so has part: feature:682194-682284:-1:exon
so has part: feature:681810-681917:-1:exon
so has part: feature:680934-681026:-1:exon
so has part: feature:679423-679590:-1:exon
so has part: feature:679194-679323:-1:exon
so has part: feature:678405-678470:-1:exon
so has part: feature:676342-676544:-1:exon
so has part: feature:675386-675470:-1:exon
so has part: feature:674613-674674:-1:exon
so has part: feature:673617-673753:-1:exon
so has part: feature:673353-673456:-1:exon
so has part: feature:672787-672884:-1:exon
so has part: feature:671801-671951:-1:exon
so has part: feature:671075-671283:-1:exon
so has part: feature:670256-670353:-1:exon
so has part: feature:669962-670047:-1:exon
so has part: feature:668837-668918:-1:exon
so has part: feature:668261-668407:-1:exon
so has part: feature:667208-667439:-1:exon
so has part: feature:666427-666516:-1:exon

XP_032053967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:685674-685758:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:684978-685120:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:683150-683251:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682589-682734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682194-682284:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681810-681917:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:680934-681026:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:679423-679590:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:679194-679323:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:678405-678470:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:676342-676544:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:675386-675470:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:674613-674674:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:673617-673753:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:673353-673456:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:672787-672884:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:671801-671951:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:671075-671283:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:670256-670353:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:669962-670047:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:668837-668918:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:668261-668407:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:667208-667439:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:666427-666516:-1:exon

CSE1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: CSE1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exportin-2
translation: MELSDANLQTLTEYLKKTLDPDPAIRRPAEKFLESVEGSQNYPLLLLTLLEKSQENVIKVCASVTFKNYIKRNWRIVEDEPNKICESDRIAIKANIVPLMLSSPEQIQKQLSDAISIIGREDFPQKWPDLLTEMVNRFQSGDFHVINGVLRTAHSLFKRYRHEFKSNELWTEIKLVLDAFALPLTNLFKATIELCSTHANDASALKVLFSSLILIAKLFYSLNFQDLPEFFEDNMETWMTNFHTLLTLDNKLLQTDDEEEAGLLELLKSQICDNAALYAQKYDEEFQPYLPRFVTAIWNLLVTTGQEVKYDLLVSNAIQFLASVCERPHYKHLFEDQNTLTSICEKVIVPNMEFRAADEEAFEDNSEEYIRRDLEGSDIDTRRRAACDLVRGLCKFFEGPVTGIFSGYVNSMLQEYAKNPSVNWKHKDAAIYLVTSLASKAQTQKHGITQANELVNLTEFFVNHIQPDLKSPSVNEFPVLKADGIKYIMIFRSQVPKEQLLLSIPLLINHLQAESIVVHTYAAHALERLFTMRGTNNSILITAAEMAPFVEVLLTNLFKALTLPGSSENEYIMKAIMRSFSLLQESIIPYIPSVITQLTQKLLAVSKNPSKPHFNHYMFESICLSIRITCKANPDAVGSFEEALFMVFTEILQNDVQEFIPYVFQVMSLLLEMHKNEIPSSYMALFPHLLQPVLWERTGNIPPLVRLLQAYLERGANTIASAAADKIPGLLGVFQKLIASKANDHQGFYLLNSIIEHMPPESVDQYRKQIFILLFQRLQNSKTTKFIKSFLVFINLYCIKYGALALQEIFDSIQPKMFGMVLEKIIIPEIQKVSGQVEKKICAVGITKILTECPPMMDTEYTKLWTPLLQALIGLFELPEDDTIPDEEHFIDIEDTPGYQTAFSQLAFAGKKEHDPVGQMVNNPRIHLAQSLHKLSTACPGRVPSMLSTSLNAEALQYLQGYLQAASVTLL
SIO_010081: CSE1L
subclass of: SO_0000673
so part of: CSE1L
location: complement(join(666427..666516,667208..667439,668261..668407,668837..668918,669962..670047,670256..670353,671075..671283,671801..671951,672787..672884,673353..673456,673617..673753,674613..674674,675386..675470,676342..676544,678405..678470,679194..679323,679423..679590,680934..681026,681810..681917,682194..682284,682589..682734,683150..683251,684978..685120,685674..685758))
location: region:666427-685758:-1
so has part: feature:685674-685758:-1:exon
so has part: feature:684978-685120:-1:exon
so has part: feature:683150-683251:-1:exon
so has part: feature:682589-682734:-1:exon
so has part: feature:682194-682284:-1:exon
so has part: feature:681810-681917:-1:exon
so has part: feature:680934-681026:-1:exon
so has part: feature:679423-679590:-1:exon
so has part: feature:679194-679323:-1:exon
so has part: feature:678405-678470:-1:exon
so has part: feature:676342-676544:-1:exon
so has part: feature:675386-675470:-1:exon
so has part: feature:674613-674674:-1:exon
so has part: feature:673617-673753:-1:exon
so has part: feature:673353-673456:-1:exon
so has part: feature:672787-672884:-1:exon
so has part: feature:671801-671951:-1:exon
so has part: feature:671075-671283:-1:exon
so has part: feature:670256-670353:-1:exon
so has part: feature:669962-670047:-1:exon
so has part: feature:668837-668918:-1:exon
so has part: feature:668261-668407:-1:exon
so has part: feature:667208-667439:-1:exon
so has part: feature:666427-666516:-1:exon

XP_032053968.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:685674-685758:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:684978-685120:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:683150-683251:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682589-682734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682194-682284:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681810-681917:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:680934-681026:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:679423-679590:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:679194-679323:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:678405-678470:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:676342-676544:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:675386-675470:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:674613-674674:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:673617-673753:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:673353-673456:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:672787-672884:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:671801-671951:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:671075-671283:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:670256-670353:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:669962-670047:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:668837-668918:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:668261-668407:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:667208-667439:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:666427-666516:-1:exon

CSE1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: CSE1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exportin-2
translation: MELSDANLQTLTEYLKKTLDPDPAIRRPAEKFLESVEGSQNYPLLLLTLLEKSQENVIKVCASVTFKNYIKRNWRIVEDEPNKICESDRIAIKANIVPLMLSSPEQIQKQLSDAISIIGREDFPQKWPDLLTEMVNRFQSGDFHVINGVLRTAHSLFKRYRHEFKSNELWTEIKLVLDAFALPLTNLFKATIELCSTHANDASALKVLFSSLILIAKLFYSLNFQDLPEFFEDNMETWMTNFHTLLTLDNKLLQTDDEEEAGLLELLKSQICDNAALYAQKYDEEFQPYLPRFVTAIWNLLVTTGQEVKYDLLVSNAIQFLASVCERPHYKHLFEDQNTLTSICEKVIVPNMEFRAADEEAFEDNSEEYIRRDLEGSDIDTRRRAACDLVRGLCKFFEGPVTGIFSGYVNSMLQEYAKNPSVNWKHKDAAIYLVTSLASKAQTQKHGITQANELVNLTEFFVNHIQPDLKSPSVNEFPVLKADGIKYIMIFRSQVPKEQLLLSIPLLINHLQAESIVVHTYAAHALERLFTMRGTNNSILITAAEMAPFVEVLLTNLFKALTLPGSSENEYIMKAIMRSFSLLQESIIPYIPSVITQLTQKLLAVSKNPSKPHFNHYMFESICLSIRITCKANPDAVGSFEEALFMVFTEILQNDVQEFIPYVFQVMSLLLEMHKNEIPSSYMALFPHLLQPVLWERTGNIPPLVRLLQAYLERGANTIASAAADKIPGLLGVFQKLIASKANDHQGFYLLNSIIEHMPPESVDQYRKQIFILLFQRLQNSKTTKFIKSFLVFINLYCIKYGALALQEIFDSIQPKMFGMVLEKIIIPEIQKVSGQVEKKICAVGITKILTECPPMMDTEYTKLWTPLLQALIGLFELPEDDTIPDEEHFIDIEDTPGYQTAFSQLAFAGKKEHDPVGQMVNNPRIHLAQSLHKLSTACPGRVPSMLSTSLNAEALQYLQGYLQAASVTLL
SIO_010081: CSE1L
subclass of: SO_0000673
so part of: CSE1L
location: complement(join(666427..666516,667208..667439,668261..668407,668837..668918,669962..670047,670256..670353,671075..671283,671801..671951,672787..672884,673353..673456,673617..673753,674613..674674,675386..675470,676342..676544,678405..678470,679194..679323,679423..679590,680934..681026,681810..681917,682194..682284,682589..682734,683150..683251,684978..685120,685674..685758))
location: region:666427-685758:-1
so has part: feature:685674-685758:-1:exon
so has part: feature:684978-685120:-1:exon
so has part: feature:683150-683251:-1:exon
so has part: feature:682589-682734:-1:exon
so has part: feature:682194-682284:-1:exon
so has part: feature:681810-681917:-1:exon
so has part: feature:680934-681026:-1:exon
so has part: feature:679423-679590:-1:exon
so has part: feature:679194-679323:-1:exon
so has part: feature:678405-678470:-1:exon
so has part: feature:676342-676544:-1:exon
so has part: feature:675386-675470:-1:exon
so has part: feature:674613-674674:-1:exon
so has part: feature:673617-673753:-1:exon
so has part: feature:673353-673456:-1:exon
so has part: feature:672787-672884:-1:exon
so has part: feature:671801-671951:-1:exon
so has part: feature:671075-671283:-1:exon
so has part: feature:670256-670353:-1:exon
so has part: feature:669962-670047:-1:exon
so has part: feature:668837-668918:-1:exon
so has part: feature:668261-668407:-1:exon
so has part: feature:667208-667439:-1:exon
so has part: feature:666427-666516:-1:exon

XP_032053969.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:685674-685758:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:684978-685120:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:683150-683251:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682589-682734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682194-682284:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681810-681917:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:680934-681026:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:679423-679590:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:679194-679323:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:678405-678470:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:676342-676544:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:675386-675470:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:674613-674674:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:673617-673753:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:673353-673456:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:672787-672884:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:671801-671951:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:671075-671283:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:670256-670353:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:669962-670047:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:668837-668918:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:668261-668407:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:667208-667439:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:666427-666516:-1:exon

ARFGEF2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: ARFGEF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(690186..723155)
location: region:690186-723155:-1
so has part: feature:690186-723155:-1:exon
subclass of: SO_0000010

116495559
type: Gene
SIO_000068: ncbigene

position:690186:-1
position: 690186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723155:-1
position: 723155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:690186-723155:-1:exon

ARFGEF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ARFGEF2
product: ADP ribosylation factor guanine nucleotide exchange factor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198120.1
SIO_010081: ARFGEF2
subclass of: SO_0000673
so part of: ARFGEF2
location: complement(join(690186..692185,692996..693113,693558..693696,694098..694266,694726..694856,695135..695249,695489..695543,695633..695771,696573..696708,697173..697302,697392..697522,697911..698071,699352..699524,699635..699786,700450..700619,700702..700742,701777..701876,702590..702737,703879..704037,704416..704544,704731..704882,705951..706122,706220..706304,707172..707377,707995..708106,708830..709031,709530..709638,710248..710387,710618..710717,710958..711192,711742..711872,712254..712402,712700..712771,713425..713644,714119..714298,715191..715337,716048..716171,717024..717054,723001..723155))
location: region:690186-723155:-1
so has part: feature:723001-723155:-1:exon
so has part: feature:717024-717054:-1:exon
so has part: feature:716048-716171:-1:exon
so has part: feature:715191-715337:-1:exon
so has part: feature:714119-714298:-1:exon
so has part: feature:713425-713644:-1:exon
so has part: feature:712700-712771:-1:exon
so has part: feature:712254-712402:-1:exon
so has part: feature:711742-711872:-1:exon
so has part: feature:710958-711192:-1:exon
so has part: feature:710618-710717:-1:exon
so has part: feature:710248-710387:-1:exon
so has part: feature:709530-709638:-1:exon
so has part: feature:708830-709031:-1:exon
so has part: feature:707995-708106:-1:exon
so has part: feature:707172-707377:-1:exon
so has part: feature:706220-706304:-1:exon
so has part: feature:705951-706122:-1:exon
so has part: feature:704731-704882:-1:exon
so has part: feature:704416-704544:-1:exon
so has part: feature:703879-704037:-1:exon
so has part: feature:702590-702737:-1:exon
so has part: feature:701777-701876:-1:exon
so has part: feature:700702-700742:-1:exon
so has part: feature:700450-700619:-1:exon
so has part: feature:699635-699786:-1:exon
so has part: feature:699352-699524:-1:exon
so has part: feature:697911-698071:-1:exon
so has part: feature:697392-697522:-1:exon
so has part: feature:697173-697302:-1:exon
so has part: feature:696573-696708:-1:exon
so has part: feature:695633-695771:-1:exon
so has part: feature:695489-695543:-1:exon
so has part: feature:695135-695249:-1:exon
so has part: feature:694726-694856:-1:exon
so has part: feature:694098-694266:-1:exon
so has part: feature:693558-693696:-1:exon
so has part: feature:692996-693113:-1:exon
so has part: feature:690186-692185:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:723001-723155:-1:exon

position:723001:-1
position: 723001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:717024-717054:-1:exon

position:717024:-1
position: 717024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717054:-1
position: 717054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:716048-716171:-1:exon

position:716048:-1
position: 716048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716171:-1
position: 716171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:715191-715337:-1:exon

position:715191:-1
position: 715191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715337:-1
position: 715337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:714119-714298:-1:exon

position:714119:-1
position: 714119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:714298:-1
position: 714298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:713425-713644:-1:exon

position:713425:-1
position: 713425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713644:-1
position: 713644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:712700-712771:-1:exon

position:712700:-1
position: 712700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712771:-1
position: 712771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:712254-712402:-1:exon

position:712254:-1
position: 712254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712402:-1
position: 712402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:711742-711872:-1:exon

position:711742:-1
position: 711742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711872:-1
position: 711872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:710958-711192:-1:exon

position:710958:-1
position: 710958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711192:-1
position: 711192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:710618-710717:-1:exon

position:710618:-1
position: 710618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710717:-1
position: 710717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:710248-710387:-1:exon

position:710248:-1
position: 710248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710387:-1
position: 710387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:709530-709638:-1:exon

position:709530:-1
position: 709530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709638:-1
position: 709638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:708830-709031:-1:exon

position:708830:-1
position: 708830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709031:-1
position: 709031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:707995-708106:-1:exon

position:707995:-1
position: 707995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708106:-1
position: 708106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:707172-707377:-1:exon

position:707172:-1
position: 707172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707377:-1
position: 707377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:706220-706304:-1:exon

position:706220:-1
position: 706220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706304:-1
position: 706304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:705951-706122:-1:exon

position:705951:-1
position: 705951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706122:-1
position: 706122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:704731-704882:-1:exon

position:704731:-1
position: 704731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704882:-1
position: 704882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:704416-704544:-1:exon

position:704416:-1
position: 704416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704544:-1
position: 704544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:703879-704037:-1:exon

position:703879:-1
position: 703879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704037:-1
position: 704037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:702590-702737:-1:exon

position:702590:-1
position: 702590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702737:-1
position: 702737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:701777-701876:-1:exon

position:701777:-1
position: 701777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:701876:-1
position: 701876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:700702-700742:-1:exon

position:700702:-1
position: 700702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700742:-1
position: 700742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:700450-700619:-1:exon

position:700450:-1
position: 700450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700619:-1
position: 700619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:699635-699786:-1:exon

position:699635:-1
position: 699635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:699786:-1
position: 699786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:699352-699524:-1:exon

position:699352:-1
position: 699352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:699524:-1
position: 699524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:697911-698071:-1:exon

position:697911:-1
position: 697911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698071:-1
position: 698071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:697392-697522:-1:exon

position:697392:-1
position: 697392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697522:-1
position: 697522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:697173-697302:-1:exon

position:697173:-1
position: 697173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697302:-1
position: 697302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:696573-696708:-1:exon

position:696573:-1
position: 696573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:696708:-1
position: 696708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:695633-695771:-1:exon

position:695633:-1
position: 695633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:695771:-1
position: 695771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:695489-695543:-1:exon

position:695489:-1
position: 695489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:695543:-1
position: 695543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:695135-695249:-1:exon

position:695135:-1
position: 695135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:695249:-1
position: 695249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:694726-694856:-1:exon

position:694726:-1
position: 694726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694856:-1
position: 694856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:694098-694266:-1:exon

position:694098:-1
position: 694098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694266:-1
position: 694266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:693558-693696:-1:exon

position:693558:-1
position: 693558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693696:-1
position: 693696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:692996-693113:-1:exon

position:692996:-1
position: 692996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693113:-1
position: 693113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:690186-692185:-1:exon

position:692185:-1
position: 692185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARFGEF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: ARFGEF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: brefeldin A-inhibited guanine nucleotide-exchange protein 2
translation: MQPPGREQDARTKSMFVSRALEKILAEKEAKRPPHGQLRRACQVALDEIKTELEKQREGTDAPPKANFIEADKYFLPFELACQSKSPRIVSTSLDCLQKLIAYGHITGNAPDSGAPGKRLIDRIVDTICNCFQGPQTDEGVQLQIIKALLTAVTSPYIEIHEGTVLQTVRTCYNIYLASKNLINQTTAKATLTQMLNVIFTRMENQSVQESREAEKTNQQKSVSPATHVVTRSPKIGQLKHNHQEDKCVVPLSVELTNGEPDRTEYGNLKSGQDLIPSASDETTDGGKEMVKGILEDVVESAVKVAEEKQVTELVKALPAVETADTALSVSSNENVQTNGIPDDGQSVSSTDNLETDVSGHQTAAKFSHVLQKDAFLVFRSLCKLSMKPLGDGPPDPKSHELRSKIVSLQLLLSVLQNAGPVFRTHEMFINAIKQYLCVALSKNGVSSVPDVFELSLAIFLTLLSNFKTHLKMQIEVFFKEIFLNILETSSSSFEHKWMVIQTLTRICADAQCVVDIYVNYDCDLNAANIFERLVNDLSKIAQGRSGHELGMTPLQELSLRKKGLECLVSILKCMVEWSKDLYVNPNHQASLGLYKPSEQEMAEGKCLESGGRRSSVSSLDSTVSSGVGSVGTQTSVPDDPEQFEVIKQQKEIIEHGIELFNKKTKRGIQYLQEQGMLGTTAEDIAQFLHQEERLCSTQVGEFLGESNKFNKEVMYAYVDQLDFCGKDFVSALRIFLEGFRLPGEAQKIDRLMEKFAARYIECNQRQTLFASADTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPVEYLSTIYEEIEGKKIAMKETKEYAITTKSSKPSVANEKQRRLLYNLEMEQMAKTAKALMEAVSHAKAPFTSATHLDHVRPMFKLVWTPLLAAYSVGLQNCDDTEVASLCLEGIRCAIRIACIFGMQLERDAYVQALARFSLLTASSSITEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLELAQLIGTGVKTRYLSGAGREREGSIKGYASGGEEFMGLGLGNLVGSGADKRHMASIQESVGETSSQSVVVAVDRIFTGSTRLDGNAIVDFVRWLCAVSMDELASPHHPRMFSLQKIVEISYYNMNRIRLQWSRIWQVIGDHFNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKKNRSPTIRDMVIRCIAQMVNSQAGNIRSGWKNIFAVFHQAASDHDGNIVELAFQTTAHIVTNIFQQHFPAAIDSFQDAVKCLSEFACNVAFPDTSMEAIRLIRYCAKYVSERPQVLREYTSDDMNVAPGDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEIMKSYGHTFEKHWWQDLFRIVFRIFDNMKLPEQQTEKSEWMTTTCNHALYAICDVFTQFYEALNEILLPDILAQLHWCVKQDNEQLARSGTNCLENLVILNGQKFSPEVWGQTCNCMLEIFKTTIPHILLTWRPVGMEEDSAEKHLDLDLDRQSLSSVDKNASERGHSQFSNPMDESWKGGPYTNQKLFAGLLIKCVVQLELIQTIDNIVFYPATSKKEDAEHMAAAQRDALDADIHIDTEDQGMYKYMSSHHLFKLLDCLQESHSFSKSFNSNYEQRTVLWRAGFKGKSKPNLLKQETSSLACCLRILFRMYVDENHRDSWDAIQRRLLSVCTEALAYFITVNSESHREAWTNLLLLLLTKTLKISDEKFRAHASTYYPYLCEIMQFDLIPELRAVLRKFFLRVGVVFKICITEEQIRTIGTNLPLW
SIO_010081: ARFGEF2
subclass of: SO_0000673
so part of: ARFGEF2
location: complement(join(692009..692185,692996..693113,693558..693696,694098..694266,694726..694856,695135..695249,695489..695543,695633..695771,696573..696708,697173..697302,697392..697522,697911..698071,699352..699524,699635..699786,700450..700619,700702..700742,701777..701876,702590..702737,703879..704037,704416..704544,704731..704882,705951..706122,706220..706304,707172..707377,707995..708106,708830..709031,709530..709638,710248..710387,710618..710717,710958..711192,711742..711872,712254..712402,712700..712771,713425..713644,714119..714298,715191..715337,716048..716171,717024..717054,723001..723139))
location: region:692009-723139:-1
so has part: feature:723001-723139:-1:exon
so has part: feature:717024-717054:-1:exon
so has part: feature:716048-716171:-1:exon
so has part: feature:715191-715337:-1:exon
so has part: feature:714119-714298:-1:exon
so has part: feature:713425-713644:-1:exon
so has part: feature:712700-712771:-1:exon
so has part: feature:712254-712402:-1:exon
so has part: feature:711742-711872:-1:exon
so has part: feature:710958-711192:-1:exon
so has part: feature:710618-710717:-1:exon
so has part: feature:710248-710387:-1:exon
so has part: feature:709530-709638:-1:exon
so has part: feature:708830-709031:-1:exon
so has part: feature:707995-708106:-1:exon
so has part: feature:707172-707377:-1:exon
so has part: feature:706220-706304:-1:exon
so has part: feature:705951-706122:-1:exon
so has part: feature:704731-704882:-1:exon
so has part: feature:704416-704544:-1:exon
so has part: feature:703879-704037:-1:exon
so has part: feature:702590-702737:-1:exon
so has part: feature:701777-701876:-1:exon
so has part: feature:700702-700742:-1:exon
so has part: feature:700450-700619:-1:exon
so has part: feature:699635-699786:-1:exon
so has part: feature:699352-699524:-1:exon
so has part: feature:697911-698071:-1:exon
so has part: feature:697392-697522:-1:exon
so has part: feature:697173-697302:-1:exon
so has part: feature:696573-696708:-1:exon
so has part: feature:695633-695771:-1:exon
so has part: feature:695489-695543:-1:exon
so has part: feature:695135-695249:-1:exon
so has part: feature:694726-694856:-1:exon
so has part: feature:694098-694266:-1:exon
so has part: feature:693558-693696:-1:exon
so has part: feature:692996-693113:-1:exon
so has part: feature:692009-692185:-1:exon

XP_032054011.1
type: Protein
SIO_000068: ncbiprotein

position:692009:-1
position: 692009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723139:-1
position: 723139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:723001-723139:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:717024-717054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:716048-716171:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:715191-715337:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:714119-714298:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:713425-713644:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:712700-712771:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:712254-712402:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:711742-711872:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:710958-711192:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:710618-710717:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:710248-710387:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:709530-709638:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:708830-709031:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:707995-708106:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:707172-707377:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:706220-706304:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:705951-706122:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:704731-704882:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:704416-704544:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:703879-704037:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:702590-702737:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:701777-701876:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:700702-700742:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:700450-700619:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:699635-699786:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:699352-699524:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:697911-698071:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:697392-697522:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:697173-697302:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:696573-696708:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:695633-695771:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:695489-695543:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:695135-695249:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:694726-694856:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:694098-694266:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:693558-693696:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:692996-693113:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:692009-692185:-1:exon

PREX1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: PREX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 751596..930322
location: region:751596-930322:1
so has part: feature:751596-930322:1:exon
subclass of: SO_0000010

116495554
type: Gene
SIO_000068: ncbigene

position:751596:1
position: 751596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:930322:1
position: 930322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751596-930322:1:exon

PREX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: PREX1
product: phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198116.1
SIO_010081: PREX1
subclass of: SO_0000673
so part of: PREX1
location: join(751596..751875,820069..820140,825028..825150,831979..832083,835617..835718,849492..849653,855012..855145,858428..858543,859720..859869,863658..863805,867281..867381,871025..871128,871826..871875,876307..876382,882819..882891,884229..884371,891739..891831,895190..895338,895940..896025,897173..897309,897731..897902,900049..900236,901023..901184,901741..901951,903142..903403,904378..904584,907524..907612,907970..908052,908675..908765,910519..910647,911096..911137,912921..913138,913985..914084,914725..914868,915661..915775,916228..916294,917028..917215,917871..917973,918534..918601,923729..930322)
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urn:…
SIO_000300: 1
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urn:…
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urn:…
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SIO_000300: 16
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SIO_000300: 32
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SIO_000300: 34
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urn:…
SIO_000300: 35
SIO_000628: feature:915661-915775:1:exon

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SIO_000300: 36
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SIO_000300: 37
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urn:…
SIO_000300: 38
SIO_000628: feature:917871-917973:1:exon

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urn:…
SIO_000300: 39
SIO_000628: feature:918534-918601:1:exon

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urn:…
SIO_000300: 40
SIO_000628: feature:923729-930322:1:exon

position:923729:1
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reference: sequence
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PREX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: PREX1
product: phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198117.1
SIO_010081: PREX1
subclass of: SO_0000673
so part of: PREX1
location: join(751596..751875,820069..820140,825028..825150,831979..832083,835617..835718,849492..849653,855012..855145,858428..858543,859720..859869,863658..863805,867281..867381,871025..871128,871826..871875,876307..876382,882819..882891,884229..884371,891739..891831,895190..895338,895940..896025,897173..897309,897731..897902,900049..900236,901023..901184,901741..901951,903145..903403,904378..904584,907524..907612,907970..908052,908675..908765,910519..910647,911096..911137,912921..913138,913985..914084,914725..914868,915661..915775,916228..916294,917028..917215,917871..917973,918534..918601,923729..930322)
location: region:751596-930322:1
so has part: feature:751596-751875:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:751596-751875:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:820069-820140:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:825028-825150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:831979-832083:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:835617-835718:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:849492-849653:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:855012-855145:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:858428-858543:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:859720-859869:1:exon

urn:…
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SIO_000628: feature:863658-863805:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:867281-867381:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:871025-871128:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:871826-871875:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:876307-876382:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:882819-882891:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:884229-884371:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:891739-891831:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:895190-895338:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:895940-896025:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:897173-897309:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:897731-897902:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:900049-900236:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:901023-901184:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:901741-901951:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:903145-903403:1:exon

position:903145:1
position: 903145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:904378-904584:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:907524-907612:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:907970-908052:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:908675-908765:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:910519-910647:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:911096-911137:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:912921-913138:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:913985-914084:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:914725-914868:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:915661-915775:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:916228-916294:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:917028-917215:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:917871-917973:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:918534-918601:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:923729-930322:1:exon

PREX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: PREX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein isoform X1
translation: MEPPSPPPPPPPPHPGAAEPAGCPKDTDRQLRLRLCVLNEILSTERDYVGTLRFLQSAFLHRIRQNAVDKAEKYITEENVKVLFSNIEDILGVHKEFLAALEFSLQPEPQSQHELGNVFLKFKDKFFVYEEYCSNHEKALRLLMELNKIPTVRAFLLSCMLLGGRKTTDIPLEGYLLTPIQRICKYPLLLKELAKRTPSKHPDHPAVQNALQAMKTVCTNINETKRQMEKLEALEQLQSHIEGWEGSNLTDICTQLLLQGTLLKISAGNIQERMFFLFDNLLVYCKRKSRVAGKKASKRTKSINGSLYIFRGRINTEVMEVENVEDGTADYHSNGYTVTNGWKIHNTAKNKWFVCMAKTAEDKQKWLDAIIKEREQRESLKLGMERDAYVMIAEKGEKLYQMMMSKKVNLIKDRRRKLSTVPKCFLGNEFVSWLTEIGEISKPEEGVNLGQALLENGIIHHVSDKHQFKNEQVMYRFRYDDGTYKPRSELEDIMSKGVRLYCRLHCLYTPVVKDRDYHLKTYKSVIPASKLVDWLIAQGDCQTREEAVALGVGLCNNGFMHHVLEKSEFKDESLYFRFYADEEMEGTSSKSKQLRNDFKLVENILGKRLLILPEEDDYGFDIEEKNKAIVVKSVRRGSSAEMAGLQTGRKIYSINEDLVFLRPFLEVETILNQSFCSRRPLRLLVATKSKEIIKIPDCPEALCFQIRGAAPPYVHAVGRGSEAAAVGLHPGQCILKVNGNNASHGNYMEVLEHFTAYRMRQQEVLGLYQWVYRTHEDAEEDRVQQAASSAYLNGSHPGSSKEDSSLERGEEVDPLQNSQQESAQIQQTIISPLITGEETPLISLTVDNTHLEHGVVYEYVSSAGIKSFVLEKIVEPKGCFSLTAKILEAFAAEDNHFVRNCKRLISLSSAVATMPQYEFRQICDTKLESISRRLASYQEFADGLKTKVSPAFKQAIMEPHSLNSMDFCPTNCHINLMEVSYPKNTTSAGRSFSIRIGRKPSIIGLDPEQVGTINPVSYTQHCITTMAAPSWRCLTPEDGDLDGSFGQQNGGTSQEERGLSFLLKQEDREIQDSYLHLFNKLDIALKEMKQYVIQINKLLSTITEPTEGGACEPPSTEETSPPSLGTEESDPDKAEHGGIKKVCFKVSEEDQEDSGHDTMSFRDSYSECNSNRDSVLSYTSVRSNSSYLGSDEMGSGDELPSDMRIPLDKQDKLHGCLEHLFNQVDAINALLKGSAITKAFEETKHFPMDHSLQEFKQKEETTVRCRNNIQASIQEDPWNLPLRIKNLVEIIQKHVEDGKNQLLLALLKCTDTELQLRRDSIFCQSLVAAICTFSEQLLAALNYRYNNNGEYEESSRDASRKWLEQIAATGVLLNYQSLLSPTVKEERTMLEDIQVTLTELDKVAFYFKQMDESLVANTHVFYHIEGSRQSLKVIFYLDSYYFSKLPSRFQNGGSLKLHTVLFTKALESMEGQLQPAGSPLEELPQQINGLSLEKVQQYYRKLRTFYLERSNLPTDSNTTAVKIDQLIRPINAMDELCRLMKSFINTKPTQSGYSSSNISGAGLLPISSELCYRLGACQITMCGTGMQRSTLSVSLEQAAILARSHGLLPKCIMQATDIMRKQGPRVEISAKNLKVMDQMPPCAPRLYRLCQPPTDGDL
SIO_010081: PREX1
subclass of: SO_0000673
so part of: PREX1
location: join(751705..751875,820069..820140,825028..825150,831979..832083,835617..835718,849492..849653,855012..855145,858428..858543,859720..859869,863658..863805,867281..867381,871025..871128,871826..871875,876307..876382,882819..882891,884229..884371,891739..891831,895190..895338,895940..896025,897173..897309,897731..897902,900049..900236,901023..901184,901741..901951,903142..903403,904378..904584,907524..907612,907970..908052,908675..908765,910519..910647,911096..911137,912921..913138,913985..914084,914725..914868,915661..915775,916228..916294,917028..917215,917871..917973,918534..918601,923729..923771)
location: region:751705-923771:1
so has part: feature:751705-751875:1:exon
so has part: feature:820069-820140:1:exon
so has part: feature:825028-825150:1:exon
so has part: feature:831979-832083:1:exon
so has part: feature:835617-835718:1:exon
so has part: feature:849492-849653:1:exon
so has part: feature:855012-855145:1:exon
so has part: feature:858428-858543:1:exon
so has part: feature:859720-859869:1:exon
so has part: feature:863658-863805:1:exon
so has part: feature:867281-867381:1:exon
so has part: feature:871025-871128:1:exon
so has part: feature:871826-871875:1:exon
so has part: feature:876307-876382:1:exon
so has part: feature:882819-882891:1:exon
so has part: feature:884229-884371:1:exon
so has part: feature:891739-891831:1:exon
so has part: feature:895190-895338:1:exon
so has part: feature:895940-896025:1:exon
so has part: feature:897173-897309:1:exon
so has part: feature:897731-897902:1:exon
so has part: feature:900049-900236:1:exon
so has part: feature:901023-901184:1:exon
so has part: feature:901741-901951:1:exon
so has part: feature:903142-903403:1:exon
so has part: feature:904378-904584:1:exon
so has part: feature:907524-907612:1:exon
so has part: feature:907970-908052:1:exon
so has part: feature:908675-908765:1:exon
so has part: feature:910519-910647:1:exon
so has part: feature:911096-911137:1:exon
so has part: feature:912921-913138:1:exon
so has part: feature:913985-914084:1:exon
so has part: feature:914725-914868:1:exon
so has part: feature:915661-915775:1:exon
so has part: feature:916228-916294:1:exon
so has part: feature:917028-917215:1:exon
so has part: feature:917871-917973:1:exon
so has part: feature:918534-918601:1:exon
so has part: feature:923729-923771:1:exon

XP_032054007.1
type: Protein
SIO_000068: ncbiprotein

position:751705:1
position: 751705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:923771:1
position: 923771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751705-751875:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:820069-820140:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:825028-825150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:831979-832083:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:835617-835718:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:849492-849653:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:855012-855145:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:858428-858543:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:859720-859869:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:863658-863805:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:867281-867381:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:871025-871128:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:871826-871875:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:876307-876382:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:882819-882891:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:884229-884371:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:891739-891831:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:895190-895338:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:895940-896025:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:897173-897309:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:897731-897902:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:900049-900236:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:901023-901184:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:901741-901951:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:903142-903403:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:904378-904584:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:907524-907612:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:907970-908052:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:908675-908765:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:910519-910647:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:911096-911137:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:912921-913138:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:913985-914084:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:914725-914868:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:915661-915775:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:916228-916294:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:917028-917215:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:917871-917973:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:918534-918601:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:923729-923771:1:exon

PREX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: PREX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein isoform X2
translation: MEPPSPPPPPPPPHPGAAEPAGCPKDTDRQLRLRLCVLNEILSTERDYVGTLRFLQSAFLHRIRQNAVDKAEKYITEENVKVLFSNIEDILGVHKEFLAALEFSLQPEPQSQHELGNVFLKFKDKFFVYEEYCSNHEKALRLLMELNKIPTVRAFLLSCMLLGGRKTTDIPLEGYLLTPIQRICKYPLLLKELAKRTPSKHPDHPAVQNALQAMKTVCTNINETKRQMEKLEALEQLQSHIEGWEGSNLTDICTQLLLQGTLLKISAGNIQERMFFLFDNLLVYCKRKSRVAGKKASKRTKSINGSLYIFRGRINTEVMEVENVEDGTADYHSNGYTVTNGWKIHNTAKNKWFVCMAKTAEDKQKWLDAIIKEREQRESLKLGMERDAYVMIAEKGEKLYQMMMSKKVNLIKDRRRKLSTVPKCFLGNEFVSWLTEIGEISKPEEGVNLGQALLENGIIHHVSDKHQFKNEQVMYRFRYDDGTYKPRSELEDIMSKGVRLYCRLHCLYTPVVKDRDYHLKTYKSVIPASKLVDWLIAQGDCQTREEAVALGVGLCNNGFMHHVLEKSEFKDESLYFRFYADEEMEGTSSKSKQLRNDFKLVENILGKRLLILPEEDDYGFDIEEKNKAIVVKSVRRGSSAEMAGLQTGRKIYSINEDLVFLRPFLEVETILNQSFCSRRPLRLLVATKSKEIIKIPDCPEALCFQIRGAAPPYVHAVGRGSEAAAVGLHPGQCILKVNGNNASHGNYMEVLEHFTAYRMRQQEVLGLYQWVYRTHEDAEEDRVQQAASSAYLNGSHPGSSKEDSSLERGEEVDPLQNSQQESAQIQQTIISPLITGEETPLISLTVDNTHLEHGVVYEYVSSAGIKSFVLEKIVEPKGCFSLTAKILEAFAAEDNHFVRNCKRLISLSSAVATMPQYEFRQICDTKLESISRRLASYQEFADGLKTKVSPAFKQAIMEPHSLNSMDFCPTNCHINLMEVSYPKNTTSAGRSFSIRIGRKPSIIGLDPEQGTINPVSYTQHCITTMAAPSWRCLTPEDGDLDGSFGQQNGGTSQEERGLSFLLKQEDREIQDSYLHLFNKLDIALKEMKQYVIQINKLLSTITEPTEGGACEPPSTEETSPPSLGTEESDPDKAEHGGIKKVCFKVSEEDQEDSGHDTMSFRDSYSECNSNRDSVLSYTSVRSNSSYLGSDEMGSGDELPSDMRIPLDKQDKLHGCLEHLFNQVDAINALLKGSAITKAFEETKHFPMDHSLQEFKQKEETTVRCRNNIQASIQEDPWNLPLRIKNLVEIIQKHVEDGKNQLLLALLKCTDTELQLRRDSIFCQSLVAAICTFSEQLLAALNYRYNNNGEYEESSRDASRKWLEQIAATGVLLNYQSLLSPTVKEERTMLEDIQVTLTELDKVAFYFKQMDESLVANTHVFYHIEGSRQSLKVIFYLDSYYFSKLPSRFQNGGSLKLHTVLFTKALESMEGQLQPAGSPLEELPQQINGLSLEKVQQYYRKLRTFYLERSNLPTDSNTTAVKIDQLIRPINAMDELCRLMKSFINTKPTQSGYSSSNISGAGLLPISSELCYRLGACQITMCGTGMQRSTLSVSLEQAAILARSHGLLPKCIMQATDIMRKQGPRVEISAKNLKVMDQMPPCAPRLYRLCQPPTDGDL
SIO_010081: PREX1
subclass of: SO_0000673
so part of: PREX1
location: join(751705..751875,820069..820140,825028..825150,831979..832083,835617..835718,849492..849653,855012..855145,858428..858543,859720..859869,863658..863805,867281..867381,871025..871128,871826..871875,876307..876382,882819..882891,884229..884371,891739..891831,895190..895338,895940..896025,897173..897309,897731..897902,900049..900236,901023..901184,901741..901951,903145..903403,904378..904584,907524..907612,907970..908052,908675..908765,910519..910647,911096..911137,912921..913138,913985..914084,914725..914868,915661..915775,916228..916294,917028..917215,917871..917973,918534..918601,923729..923771)
location: region:751705-923771:1
so has part: feature:751705-751875:1:exon
so has part: feature:820069-820140:1:exon
so has part: feature:825028-825150:1:exon
so has part: feature:831979-832083:1:exon
so has part: feature:835617-835718:1:exon
so has part: feature:849492-849653:1:exon
so has part: feature:855012-855145:1:exon
so has part: feature:858428-858543:1:exon
so has part: feature:859720-859869:1:exon
so has part: feature:863658-863805:1:exon
so has part: feature:867281-867381:1:exon
so has part: feature:871025-871128:1:exon
so has part: feature:871826-871875:1:exon
so has part: feature:876307-876382:1:exon
so has part: feature:882819-882891:1:exon
so has part: feature:884229-884371:1:exon
so has part: feature:891739-891831:1:exon
so has part: feature:895190-895338:1:exon
so has part: feature:895940-896025:1:exon
so has part: feature:897173-897309:1:exon
so has part: feature:897731-897902:1:exon
so has part: feature:900049-900236:1:exon
so has part: feature:901023-901184:1:exon
so has part: feature:901741-901951:1:exon
so has part: feature:903145-903403:1:exon
so has part: feature:904378-904584:1:exon
so has part: feature:907524-907612:1:exon
so has part: feature:907970-908052:1:exon
so has part: feature:908675-908765:1:exon
so has part: feature:910519-910647:1:exon
so has part: feature:911096-911137:1:exon
so has part: feature:912921-913138:1:exon
so has part: feature:913985-914084:1:exon
so has part: feature:914725-914868:1:exon
so has part: feature:915661-915775:1:exon
so has part: feature:916228-916294:1:exon
so has part: feature:917028-917215:1:exon
so has part: feature:917871-917973:1:exon
so has part: feature:918534-918601:1:exon
so has part: feature:923729-923771:1:exon

XP_032054008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:751705-751875:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:820069-820140:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:825028-825150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:831979-832083:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:835617-835718:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:849492-849653:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:855012-855145:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:858428-858543:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:859720-859869:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:863658-863805:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:867281-867381:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:871025-871128:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:871826-871875:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:876307-876382:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:882819-882891:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:884229-884371:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:891739-891831:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:895190-895338:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:895940-896025:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:897173-897309:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:897731-897902:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:900049-900236:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:901023-901184:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:901741-901951:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:903145-903403:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:904378-904584:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:907524-907612:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:907970-908052:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:908675-908765:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:910519-910647:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:911096-911137:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:912921-913138:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:913985-914084:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:914725-914868:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:915661-915775:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:916228-916294:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:917028-917215:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:917871-917973:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:918534-918601:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:923729-923771:1:exon

PREX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: PREX1
product: phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032198118.1
SIO_010081: PREX1
subclass of: SO_0000673
so part of: PREX1
location: join(778810..778843,820069..820140,825028..825150,831979..832083,835617..835718,849492..849653,855012..855145,858428..858543,859720..859869,863658..863805,867281..867381,871025..871128,871826..871875,876307..876382,882819..882891,884229..884371,891739..891831,895190..895338,895940..896025,897173..897309,897731..897902,900049..900236,901023..901184,901741..901951,903142..903403,904378..904584,907524..907612,907970..908052,908675..908765,910519..910647,911096..911137,912921..913138,913985..914084,914725..914868,915661..915775,916228..916294,917028..917215,917871..917973,918534..918601,923729..930322)
location: region:778810-930322:1
so has part: feature:778810-778843:1:exon
so has part: feature:820069-820140:1:exon
so has part: feature:825028-825150:1:exon
so has part: feature:831979-832083:1:exon
so has part: feature:835617-835718:1:exon
so has part: feature:849492-849653:1:exon
so has part: feature:855012-855145:1:exon
so has part: feature:858428-858543:1:exon
so has part: feature:859720-859869:1:exon
so has part: feature:863658-863805:1:exon
so has part: feature:867281-867381:1:exon
so has part: feature:871025-871128:1:exon
so has part: feature:871826-871875:1:exon
so has part: feature:876307-876382:1:exon
so has part: feature:882819-882891:1:exon
so has part: feature:884229-884371:1:exon
so has part: feature:891739-891831:1:exon
so has part: feature:895190-895338:1:exon
so has part: feature:895940-896025:1:exon
so has part: feature:897173-897309:1:exon
so has part: feature:897731-897902:1:exon
so has part: feature:900049-900236:1:exon
so has part: feature:901023-901184:1:exon
so has part: feature:901741-901951:1:exon
so has part: feature:903142-903403:1:exon
so has part: feature:904378-904584:1:exon
so has part: feature:907524-907612:1:exon
so has part: feature:907970-908052:1:exon
so has part: feature:908675-908765:1:exon
so has part: feature:910519-910647:1:exon
so has part: feature:911096-911137:1:exon
so has part: feature:912921-913138:1:exon
so has part: feature:913985-914084:1:exon
so has part: feature:914725-914868:1:exon
so has part: feature:915661-915775:1:exon
so has part: feature:916228-916294:1:exon
so has part: feature:917028-917215:1:exon
so has part: feature:917871-917973:1:exon
so has part: feature:918534-918601:1:exon
so has part: feature:923729-930322:1:exon

position:778810:1
position: 778810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:778810-778843:1:exon

position:778843:1
position: 778843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:820069-820140:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:825028-825150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:831979-832083:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:835617-835718:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:849492-849653:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:855012-855145:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:858428-858543:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:859720-859869:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:863658-863805:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:867281-867381:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:871025-871128:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:871826-871875:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:876307-876382:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:882819-882891:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:884229-884371:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:891739-891831:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:895190-895338:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:895940-896025:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:897173-897309:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:897731-897902:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:900049-900236:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:901023-901184:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:901741-901951:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:903142-903403:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:904378-904584:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:907524-907612:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:907970-908052:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:908675-908765:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:910519-910647:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:911096-911137:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:912921-913138:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:913985-914084:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:914725-914868:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:915661-915775:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:916228-916294:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:917028-917215:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:917871-917973:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:918534-918601:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:923729-930322:1:exon

PREX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: PREX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein isoform X3
translation: MLSYLAFLHRIRQNAVDKAEKYITEENVKVLFSNIEDILGVHKEFLAALEFSLQPEPQSQHELGNVFLKFKDKFFVYEEYCSNHEKALRLLMELNKIPTVRAFLLSCMLLGGRKTTDIPLEGYLLTPIQRICKYPLLLKELAKRTPSKHPDHPAVQNALQAMKTVCTNINETKRQMEKLEALEQLQSHIEGWEGSNLTDICTQLLLQGTLLKISAGNIQERMFFLFDNLLVYCKRKSRVAGKKASKRTKSINGSLYIFRGRINTEVMEVENVEDGTADYHSNGYTVTNGWKIHNTAKNKWFVCMAKTAEDKQKWLDAIIKEREQRESLKLGMERDAYVMIAEKGEKLYQMMMSKKVNLIKDRRRKLSTVPKCFLGNEFVSWLTEIGEISKPEEGVNLGQALLENGIIHHVSDKHQFKNEQVMYRFRYDDGTYKPRSELEDIMSKGVRLYCRLHCLYTPVVKDRDYHLKTYKSVIPASKLVDWLIAQGDCQTREEAVALGVGLCNNGFMHHVLEKSEFKDESLYFRFYADEEMEGTSSKSKQLRNDFKLVENILGKRLLILPEEDDYGFDIEEKNKAIVVKSVRRGSSAEMAGLQTGRKIYSINEDLVFLRPFLEVETILNQSFCSRRPLRLLVATKSKEIIKIPDCPEALCFQIRGAAPPYVHAVGRGSEAAAVGLHPGQCILKVNGNNASHGNYMEVLEHFTAYRMRQQEVLGLYQWVYRTHEDAEEDRVQQAASSAYLNGSHPGSSKEDSSLERGEEVDPLQNSQQESAQIQQTIISPLITGEETPLISLTVDNTHLEHGVVYEYVSSAGIKSFVLEKIVEPKGCFSLTAKILEAFAAEDNHFVRNCKRLISLSSAVATMPQYEFRQICDTKLESISRRLASYQEFADGLKTKVSPAFKQAIMEPHSLNSMDFCPTNCHINLMEVSYPKNTTSAGRSFSIRIGRKPSIIGLDPEQVGTINPVSYTQHCITTMAAPSWRCLTPEDGDLDGSFGQQNGGTSQEERGLSFLLKQEDREIQDSYLHLFNKLDIALKEMKQYVIQINKLLSTITEPTEGGACEPPSTEETSPPSLGTEESDPDKAEHGGIKKVCFKVSEEDQEDSGHDTMSFRDSYSECNSNRDSVLSYTSVRSNSSYLGSDEMGSGDELPSDMRIPLDKQDKLHGCLEHLFNQVDAINALLKGSAITKAFEETKHFPMDHSLQEFKQKEETTVRCRNNIQASIQEDPWNLPLRIKNLVEIIQKHVEDGKNQLLLALLKCTDTELQLRRDSIFCQSLVAAICTFSEQLLAALNYRYNNNGEYEESSRDASRKWLEQIAATGVLLNYQSLLSPTVKEERTMLEDIQVTLTELDKVAFYFKQMDESLVANTHVFYHIEGSRQSLKVIFYLDSYYFSKLPSRFQNGGSLKLHTVLFTKALESMEGQLQPAGSPLEELPQQINGLSLEKVQQYYRKLRTFYLERSNLPTDSNTTAVKIDQLIRPINAMDELCRLMKSFINTKPTQSGYSSSNISGAGLLPISSELCYRLGACQITMCGTGMQRSTLSVSLEQAAILARSHGLLPKCIMQATDIMRKQGPRVEISAKNLKVMDQMPPCAPRLYRLCQPPTDGDL
SIO_010081: PREX1
subclass of: SO_0000673
so part of: PREX1
location: join(778829..778843,820069..820140,825028..825150,831979..832083,835617..835718,849492..849653,855012..855145,858428..858543,859720..859869,863658..863805,867281..867381,871025..871128,871826..871875,876307..876382,882819..882891,884229..884371,891739..891831,895190..895338,895940..896025,897173..897309,897731..897902,900049..900236,901023..901184,901741..901951,903142..903403,904378..904584,907524..907612,907970..908052,908675..908765,910519..910647,911096..911137,912921..913138,913985..914084,914725..914868,915661..915775,916228..916294,917028..917215,917871..917973,918534..918601,923729..923771)
location: region:778829-923771:1
so has part: feature:778829-778843:1:exon
so has part: feature:820069-820140:1:exon
so has part: feature:825028-825150:1:exon
so has part: feature:831979-832083:1:exon
so has part: feature:835617-835718:1:exon
so has part: feature:849492-849653:1:exon
so has part: feature:855012-855145:1:exon
so has part: feature:858428-858543:1:exon
so has part: feature:859720-859869:1:exon
so has part: feature:863658-863805:1:exon
so has part: feature:867281-867381:1:exon
so has part: feature:871025-871128:1:exon
so has part: feature:871826-871875:1:exon
so has part: feature:876307-876382:1:exon
so has part: feature:882819-882891:1:exon
so has part: feature:884229-884371:1:exon
so has part: feature:891739-891831:1:exon
so has part: feature:895190-895338:1:exon
so has part: feature:895940-896025:1:exon
so has part: feature:897173-897309:1:exon
so has part: feature:897731-897902:1:exon
so has part: feature:900049-900236:1:exon
so has part: feature:901023-901184:1:exon
so has part: feature:901741-901951:1:exon
so has part: feature:903142-903403:1:exon
so has part: feature:904378-904584:1:exon
so has part: feature:907524-907612:1:exon
so has part: feature:907970-908052:1:exon
so has part: feature:908675-908765:1:exon
so has part: feature:910519-910647:1:exon
so has part: feature:911096-911137:1:exon
so has part: feature:912921-913138:1:exon
so has part: feature:913985-914084:1:exon
so has part: feature:914725-914868:1:exon
so has part: feature:915661-915775:1:exon
so has part: feature:916228-916294:1:exon
so has part: feature:917028-917215:1:exon
so has part: feature:917871-917973:1:exon
so has part: feature:918534-918601:1:exon
so has part: feature:923729-923771:1:exon

XP_032054009.1
type: Protein
SIO_000068: ncbiprotein

position:778829:1
position: 778829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:778829-778843:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:820069-820140:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:825028-825150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:831979-832083:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:835617-835718:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:849492-849653:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:855012-855145:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:858428-858543:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:859720-859869:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:863658-863805:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:867281-867381:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:871025-871128:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:871826-871875:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:876307-876382:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:882819-882891:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:884229-884371:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:891739-891831:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:895190-895338:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:895940-896025:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:897173-897309:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:897731-897902:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:900049-900236:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:901023-901184:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:901741-901951:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:903142-903403:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:904378-904584:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:907524-907612:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:907970-908052:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:908675-908765:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:910519-910647:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:911096-911137:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:912921-913138:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:913985-914084:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:914725-914868:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:915661-915775:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:916228-916294:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:917028-917215:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:917871-917973:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:918534-918601:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:923729-923771:1:exon

LOC116495557
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116495557
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(910641..1101953)
location: region:910641-1101953:-1
so has part: feature:910641-1101953:-1:exon
subclass of: SO_0000011

116495557
type: Gene
SIO_000068: ncbigene

position:910641:-1
position: 910641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1101953:-1
position: 1101953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:910641-1101953:-1:exon

LOC116495557
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116495557
product: uncharacterized LOC116495557, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004253957.1
SIO_010081: LOC116495557
subclass of: SO_0000673
so part of: LOC116495557
location: complement(join(910641..912618,933013..933121,967126..967651,970504..970569,980786..980953,981528..981605,1100024..1100149,1101686..1101953))
location: region:910641-1101953:-1
so has part: feature:1101686-1101953:-1:exon
so has part: feature:1100024-1100149:-1:exon
so has part: feature:981528-981605:-1:exon
so has part: feature:980786-980953:-1:exon
so has part: feature:970504-970569:-1:exon
so has part: feature:967126-967651:-1:exon
so has part: feature:933013-933121:-1:exon
so has part: feature:910641-912618:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1101686-1101953:-1:exon

position:1101686:-1
position: 1101686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1100024-1100149:-1:exon

position:1100024:-1
position: 1100024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1100149:-1
position: 1100149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:981528-981605:-1:exon

position:981528:-1
position: 981528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981605:-1
position: 981605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:980786-980953:-1:exon

position:980786:-1
position: 980786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:980953:-1
position: 980953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:970504-970569:-1:exon

position:970504:-1
position: 970504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:970569:-1
position: 970569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:967126-967651:-1:exon

position:967126:-1
position: 967126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:967651:-1
position: 967651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:933013-933121:-1:exon

position:933013:-1
position: 933013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:933121:-1
position: 933121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:910641-912618:-1:exon

position:912618:-1
position: 912618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116495557
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116495557
product: uncharacterized LOC116495557, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004253956.1
SIO_010081: LOC116495557
subclass of: SO_0000673
so part of: LOC116495557
location: complement(join(910641..912618,933013..933121,967126..967214,970504..970569,978593..978770,980786..980953,981528..981605,1100024..1100149,1101686..1101953))
location: region:910641-1101953:-1
so has part: feature:1101686-1101953:-1:exon
so has part: feature:1100024-1100149:-1:exon
so has part: feature:981528-981605:-1:exon
so has part: feature:980786-980953:-1:exon
so has part: feature:978593-978770:-1:exon
so has part: feature:970504-970569:-1:exon
so has part: feature:967126-967214:-1:exon
so has part: feature:933013-933121:-1:exon
so has part: feature:910641-912618:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1101686-1101953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1100024-1100149:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:981528-981605:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:980786-980953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:978593-978770:-1:exon

position:978593:-1
position: 978593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978770:-1
position: 978770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:970504-970569:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:967126-967214:-1:exon

position:967214:-1
position: 967214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:933013-933121:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:910641-912618:-1:exon

LOC116495557
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116495557
product: uncharacterized LOC116495557, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004253955.1
SIO_010081: LOC116495557
subclass of: SO_0000673
so part of: LOC116495557
location: complement(join(910641..912618,933013..933121,967126..967651,970504..970569,978593..978770,980786..980953,981528..981605,1100024..1100149,1101686..1101953))
location: region:910641-1101953:-1
so has part: feature:1101686-1101953:-1:exon
so has part: feature:1100024-1100149:-1:exon
so has part: feature:981528-981605:-1:exon
so has part: feature:980786-980953:-1:exon
so has part: feature:978593-978770:-1:exon
so has part: feature:970504-970569:-1:exon
so has part: feature:967126-967651:-1:exon
so has part: feature:933013-933121:-1:exon
so has part: feature:910641-912618:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1101686-1101953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1100024-1100149:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:981528-981605:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:980786-980953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:978593-978770:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:970504-970569:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:967126-967651:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:933013-933121:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:910641-912618:-1:exon

LOC116495556
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116495556
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1102101..1164245
location: region:1102101-1164245:1
so has part: feature:1102101-1164245:1:exon
subclass of: SO_0000011

116495556
type: Gene
SIO_000068: ncbigene

position:1102101:1
position: 1102101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164245:1
position: 1164245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1102101-1164245:1:exon

LOC116495556
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116495556
product: uncharacterized LOC116495556
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004253954.1
SIO_010081: LOC116495556
subclass of: SO_0000673
so part of: LOC116495556
location: join(1102101..1102260,1102766..1102849,1155497..1155563,1163490..1163548,1164134..1164245)
location: region:1102101-1164245:1
so has part: feature:1102101-1102260:1:exon
so has part: feature:1102766-1102849:1:exon
so has part: feature:1155497-1155563:1:exon
so has part: feature:1163490-1163548:1:exon
so has part: feature:1164134-1164245:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1102101-1102260:1:exon

position:1102260:1
position: 1102260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1102766-1102849:1:exon

position:1102766:1
position: 1102766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1102849:1
position: 1102849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1155497-1155563:1:exon

position:1155497:1
position: 1155497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1155563:1
position: 1155563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1163490-1163548:1:exon

position:1163490:1
position: 1163490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1163548:1
position: 1163548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1164134-1164245:1:exon

position:1164134:1
position: 1164134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SULF2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: SULF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1199160..1268461
location: region:1199160-1268461:1
so has part: feature:1199160-1268461:1:exon
subclass of: SO_0000010

116495555
type: Gene
SIO_000068: ncbigene

position:1199160:1
position: 1199160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1268461:1
position: 1268461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1199160-1268461:1:exon

SULF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SULF2
product: sulfatase 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198119.1
SIO_010081: SULF2
subclass of: SO_0000673
so part of: SULF2
location: join(1199160..1199258,1203331..1203520,1205205..1205452,1211713..1211952,1224865..1225016,1228447..1228616,1232982..1233132,1234961..1235136,1238987..1239116,1240049..1240105,1240820..1240949,1250694..1250901,1257040..1257283,1259027..1259123,1260253..1260347,1262930..1262989,1263408..1263577,1264076..1264218,1264436..1264559,1266023..1266053,1266351..1266407,1267531..1268461)
location: region:1199160-1268461:1
so has part: feature:1199160-1199258:1:exon
so has part: feature:1203331-1203520:1:exon
so has part: feature:1205205-1205452:1:exon
so has part: feature:1211713-1211952:1:exon
so has part: feature:1224865-1225016:1:exon
so has part: feature:1228447-1228616:1:exon
so has part: feature:1232982-1233132:1:exon
so has part: feature:1234961-1235136:1:exon
so has part: feature:1238987-1239116:1:exon
so has part: feature:1240049-1240105:1:exon
so has part: feature:1240820-1240949:1:exon
so has part: feature:1250694-1250901:1:exon
so has part: feature:1257040-1257283:1:exon
so has part: feature:1259027-1259123:1:exon
so has part: feature:1260253-1260347:1:exon
so has part: feature:1262930-1262989:1:exon
so has part: feature:1263408-1263577:1:exon
so has part: feature:1264076-1264218:1:exon
so has part: feature:1264436-1264559:1:exon
so has part: feature:1266023-1266053:1:exon
so has part: feature:1266351-1266407:1:exon
so has part: feature:1267531-1268461:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1199160-1199258:1:exon

position:1199258:1
position: 1199258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1203331-1203520:1:exon

position:1203331:1
position: 1203331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1203520:1
position: 1203520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1205205-1205452:1:exon

position:1205205:1
position: 1205205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1205452:1
position: 1205452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1211713-1211952:1:exon

position:1211713:1
position: 1211713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1211952:1
position: 1211952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1224865-1225016:1:exon

position:1224865:1
position: 1224865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1225016:1
position: 1225016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1228447-1228616:1:exon

position:1228447:1
position: 1228447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1228616:1
position: 1228616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1232982-1233132:1:exon

position:1232982:1
position: 1232982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1233132:1
position: 1233132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1234961-1235136:1:exon

position:1234961:1
position: 1234961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1235136:1
position: 1235136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1238987-1239116:1:exon

position:1238987:1
position: 1238987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1239116:1
position: 1239116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1240049-1240105:1:exon

position:1240049:1
position: 1240049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1240105:1
position: 1240105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1240820-1240949:1:exon

position:1240820:1
position: 1240820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1240949:1
position: 1240949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1250694-1250901:1:exon

position:1250694:1
position: 1250694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1250901:1
position: 1250901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1257040-1257283:1:exon

position:1257040:1
position: 1257040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1257283:1
position: 1257283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1259027-1259123:1:exon

position:1259027:1
position: 1259027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1259123:1
position: 1259123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1260253-1260347:1:exon

position:1260253:1
position: 1260253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1260347:1
position: 1260347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1262930-1262989:1:exon

position:1262930:1
position: 1262930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1262989:1
position: 1262989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1263408-1263577:1:exon

position:1263408:1
position: 1263408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1263577:1
position: 1263577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1264076-1264218:1:exon

position:1264076:1
position: 1264076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1264218:1
position: 1264218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1264436-1264559:1:exon

position:1264436:1
position: 1264436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1264559:1
position: 1264559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1266023-1266053:1:exon

position:1266023:1
position: 1266023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1266053:1
position: 1266053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1266351-1266407:1:exon

position:1266351:1
position: 1266351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1266407:1
position: 1266407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1267531-1268461:1:exon

position:1267531:1
position: 1267531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SULF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SULF2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: extracellular sulfatase Sulf-2
translation: MAQHSLVLGLFMMTVLSLLDGSSAFLLNQRLKGRFQRDRRNIRPNIILILTDDQDVELGSMQVMNKTRRIMEHGGAHFINAFVTTPMCCPSRSSILTGKYVHNHNTYTNNENCSSPSWQAQHEIRTFAVYLNNTGYRTAFFGKYLNEYNGSYVPPGWKEWVGLLKNSRFYNYTLCRNGVKEKHGFDYSRDYLTDLITNDSITFFRISKKMYPHRPVLMVISHAAPHGPEDSAPQYSHLFPNASQHITPSYNYAPNPDKHWIMRYTGPMKPIHMEFTNMLQRKRLQTLMSVDDSMEMIYNALVETGELDNTYIIYTADHGYHIGQFGLVKGKSMPYEFDIRVPFYVRGPNVEAGSLNPHIVLNIDLAPTILDIAGLDIPSDMDGKSILKLLDSERPVNRFHLKKKMKVWRDSFLVERGKLLHKRENEKVDAQEENFLPKYQRVKDLCQRAEYQTACEQLGQKWQCVEDASGKLKLHKCKGMVNLAGAGNSKGTSNLLPKYYNRNSEGCNCEENEYKLSHVGRRKKLFSKKKYKPSYVRNRSIRSVSVELNGAIYNLGLEDGYQPVLPRNITKRHKMQRAIPPEEEDKDMAEYSGTGGIAEYTAPNLIKVTHRCYILENDTVQCDTDLYRSLQAWKDHKLHIDHEIETLQNKIKNLREVRGHLKKKRPEECDCNKISYHSKHKSKLRHKGSNLHPFKKALQEKDRLWLLREQRRKKKLRKLLKRIKNNDTCSMPGLTCFTHDNQHWQTAPLWTLGPFCACTSANNNTYWCLRTINETHNFLFCEFATGFLEYFDLNTDPYQLINAVNTLDREVLNQLHIQLMELRSCKGYKQCNPRTRNMDLGLKDGSYEQYRQFQRRKWPDVKRPSSSKSLGQLWEGWEG
SIO_010081: SULF2
subclass of: SO_0000673
so part of: SULF2
location: join(1205278..1205452,1211713..1211952,1224865..1225016,1228447..1228616,1232982..1233132,1234961..1235136,1238987..1239116,1240049..1240105,1240820..1240949,1250694..1250901,1257040..1257283,1259027..1259123,1260253..1260347,1262930..1262989,1263408..1263577,1264076..1264218,1264436..1264559,1266023..1266053,1266351..1266407,1267531..1267561)
location: region:1205278-1267561:1
so has part: feature:1205278-1205452:1:exon
so has part: feature:1211713-1211952:1:exon
so has part: feature:1224865-1225016:1:exon
so has part: feature:1228447-1228616:1:exon
so has part: feature:1232982-1233132:1:exon
so has part: feature:1234961-1235136:1:exon
so has part: feature:1238987-1239116:1:exon
so has part: feature:1240049-1240105:1:exon
so has part: feature:1240820-1240949:1:exon
so has part: feature:1250694-1250901:1:exon
so has part: feature:1257040-1257283:1:exon
so has part: feature:1259027-1259123:1:exon
so has part: feature:1260253-1260347:1:exon
so has part: feature:1262930-1262989:1:exon
so has part: feature:1263408-1263577:1:exon
so has part: feature:1264076-1264218:1:exon
so has part: feature:1264436-1264559:1:exon
so has part: feature:1266023-1266053:1:exon
so has part: feature:1266351-1266407:1:exon
so has part: feature:1267531-1267561:1:exon

XP_032054010.1
type: Protein
SIO_000068: ncbiprotein

position:1205278:1
position: 1205278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1267561:1
position: 1267561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1205278-1205452:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1211713-1211952:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1224865-1225016:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1228447-1228616:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1232982-1233132:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1234961-1235136:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1238987-1239116:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1240049-1240105:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1240820-1240949:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1250694-1250901:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1257040-1257283:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1259027-1259123:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1260253-1260347:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1262930-1262989:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1263408-1263577:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1264076-1264218:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1264436-1264559:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1266023-1266053:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1266351-1266407:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1267531-1267561:1:exon

NCOA3
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: NCOA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1271037..1354572)
location: region:1271037-1354572:-1
so has part: feature:1271037-1354572:-1:exon
subclass of: SO_0000010

116495739
type: Gene
SIO_000068: ncbigene

position:1271037:-1
position: 1271037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354572:-1
position: 1354572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1271037-1354572:-1:exon

NCOA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: NCOA3
product: nuclear receptor coactivator 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032198425.1
SIO_010081: NCOA3
subclass of: SO_0000673
so part of: NCOA3
location: complement(join(1271037..1272832,1273769..1273910,1274464..1274638,1274873..1275098,1275579..1275680,1276762..1277058,1277651..1277822,1278337..1278463,1279230..1279469,1281916..1282104,1283210..1283345,1284292..1285172,1285428..1285816,1286688..1286835,1288056..1288196,1289015..1289116,1289371..1289559,1290160..1290334,1291258..1291358,1292454..1292626,1293295..1293402,1298200..1298275,1334908..1334949,1339186..1339289))
location: region:1271037-1339289:-1
so has part: feature:1339186-1339289:-1:exon
so has part: feature:1334908-1334949:-1:exon
so has part: feature:1298200-1298275:-1:exon
so has part: feature:1293295-1293402:-1:exon
so has part: feature:1292454-1292626:-1:exon
so has part: feature:1291258-1291358:-1:exon
so has part: feature:1290160-1290334:-1:exon
so has part: feature:1289371-1289559:-1:exon
so has part: feature:1289015-1289116:-1:exon
so has part: feature:1288056-1288196:-1:exon
so has part: feature:1286688-1286835:-1:exon
so has part: feature:1285428-1285816:-1:exon
so has part: feature:1284292-1285172:-1:exon
so has part: feature:1283210-1283345:-1:exon
so has part: feature:1281916-1282104:-1:exon
so has part: feature:1279230-1279469:-1:exon
so has part: feature:1278337-1278463:-1:exon
so has part: feature:1277651-1277822:-1:exon
so has part: feature:1276762-1277058:-1:exon
so has part: feature:1275579-1275680:-1:exon
so has part: feature:1274873-1275098:-1:exon
so has part: feature:1274464-1274638:-1:exon
so has part: feature:1273769-1273910:-1:exon
so has part: feature:1271037-1272832:-1:exon

position:1339289:-1
position: 1339289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1339186-1339289:-1:exon

position:1339186:-1
position: 1339186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1334908-1334949:-1:exon

position:1334908:-1
position: 1334908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1334949:-1
position: 1334949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1298200-1298275:-1:exon

position:1298200:-1
position: 1298200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1298275:-1
position: 1298275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1293295-1293402:-1:exon

position:1293295:-1
position: 1293295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1293402:-1
position: 1293402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1292454-1292626:-1:exon

position:1292454:-1
position: 1292454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1292626:-1
position: 1292626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1291258-1291358:-1:exon

position:1291258:-1
position: 1291258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1291358:-1
position: 1291358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1290160-1290334:-1:exon

position:1290160:-1
position: 1290160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1290334:-1
position: 1290334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1289371-1289559:-1:exon

position:1289371:-1
position: 1289371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1289559:-1
position: 1289559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1289015-1289116:-1:exon

position:1289015:-1
position: 1289015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1289116:-1
position: 1289116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1288056-1288196:-1:exon

position:1288056:-1
position: 1288056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1288196:-1
position: 1288196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1286688-1286835:-1:exon

position:1286688:-1
position: 1286688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1286835:-1
position: 1286835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1285428-1285816:-1:exon

position:1285428:-1
position: 1285428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1285816:-1
position: 1285816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1284292-1285172:-1:exon

position:1284292:-1
position: 1284292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1285172:-1
position: 1285172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1283210-1283345:-1:exon

position:1283210:-1
position: 1283210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1283345:-1
position: 1283345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1281916-1282104:-1:exon

position:1281916:-1
position: 1281916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1282104:-1
position: 1282104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1279230-1279469:-1:exon

position:1279230:-1
position: 1279230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1279469:-1
position: 1279469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1278337-1278463:-1:exon

position:1278337:-1
position: 1278337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1278463:-1
position: 1278463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1277651-1277822:-1:exon

position:1277651:-1
position: 1277651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1277822:-1
position: 1277822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1276762-1277058:-1:exon

position:1276762:-1
position: 1276762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1277058:-1
position: 1277058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1275579-1275680:-1:exon

position:1275579:-1
position: 1275579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1275680:-1
position: 1275680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1274873-1275098:-1:exon

position:1274873:-1
position: 1274873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1275098:-1
position: 1275098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1274464-1274638:-1:exon

position:1274464:-1
position: 1274464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1274638:-1
position: 1274638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1273769-1273910:-1:exon

position:1273769:-1
position: 1273769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1273910:-1
position: 1273910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1271037-1272832:-1:exon

position:1272832:-1
position: 1272832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NCOA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: NCOA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor coactivator 3 isoform X2
translation: MSGLGENSLDSLANESRKRKPLPCDTPGASLTCSGEKRRREQESKYIEELAELISANLSDIDNFNVKPDKCAILKETVRQIRQIKEQGKAVSNDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYGILHEEDRKDFLKNLPKSSVNGVAWTNETPRQKSHTFNCRMMVKTSHDLLEDVGSHQDTRQRYETMQCFALSQPRAMMEEGEDLQSCMICVARRITTAERVFPTNPESFITRHDLSGKLVNIDTNSLRSSMRPGFEDTIRRCIQRFLCHNDGQTWSNKRHYHEAYTQGHAETPLYRFSLADGTIVTAQTKSKLFRNPVTNDRHGFVSTHFLQREQNGYRPNPNTVGQNMRTPVAGNTNSVGGLMNMSPSQSMPLQNRNYGMGDPNTVSQLSNSRYGGPGSMGPVNSGPGMQSSAYQNNSYGLNISSPPHGSPGLTSNQQNIMISPRNRGSPKMSSHQFSPVTGMHSPMGSASNTSNSTFSSSSLSALQAISEGVGTSLLSTLSSPGPKLDNSPNMSVAQQNKASTQDSKSPSGLYCEQNQVESSLCQSNSRDLLSEKDSKEGSLETPESQRGQSESKGHKKLLQLLTCSSDERGHSTASNSPLESNCKESSTNVTSPSGVSSSTSGGVSSSSNMHGSLLQEKHRILHKLLQNGNSPAEVAKITAEATGKDTYHDTANTAPCGEGTVKQEQLSPKKKENNALLRYLLDKDDVKDPLSKELKPKVENVDNKMGQCSSSSIPTSSQEKDMKIKTEPTEEMSGDLDNLDAILGDLTSSEFYNNAMSTNGNSFGTKQALFQGNAPLSMRSPQSVQPTRPPFNRAMSLDSPVGSSAPVRNVNAFSMLQKQNLMGGSPRMIENQENFGANLVSAPNRSVAMNQHQSGDWGLPNSKVNRLEPTSSTSVMRPGPEFSASLPRPTAGSSMPGLPVRSNSIPGTRPMLQQQIIHMRSNEINVGLGGNPYGQPAPSNQPGSWPDNMLSMEQASRSSQNRQLVRNSLDDLLCAAPNVEGQNEERALLDQLHTLLSNTDVTSLEEIDRALGIPDLVNQGQALEAKQDSFQGQESAVMIDQKPSLYGQPYQGQGAALPGGFSNIQGQQPSFNSVMNQMSQQSNFPLQSMHPRANVMRPRTNTPKQLRMQLQQRLQGQQFMNQTRQALEMKMENPGSNTSVMRPVMQPQVASQQQGFLNAQMVAQRNRELISHHFRQQRMAMMMQQQQQPQAFSPPPNVTASGSMDSGLTGPPMAQVPPQQFSYPPNYGITQQPDPAFSRVSSPPNPMMSSRMGPSQNPMMQHPQAAAMYQSPEMKGWPSGSMTRSSSFPQQQFSHQGNPATYSMMHMNGSSGHLGQMNINTMPMSGMPMGPDQKYC
SIO_010081: NCOA3
subclass of: SO_0000673
so part of: NCOA3
location: complement(join(1272821..1272832,1273769..1273910,1274464..1274638,1274873..1275098,1275579..1275680,1276762..1277058,1277651..1277822,1278337..1278463,1279230..1279469,1281916..1282104,1283210..1283345,1284292..1285172,1285428..1285816,1286688..1286835,1288056..1288196,1289015..1289116,1289371..1289559,1290160..1290334,1291258..1291358,1292454..1292626,1293295..1293383))
location: region:1272821-1293383:-1
so has part: feature:1293295-1293383:-1:exon
so has part: feature:1292454-1292626:-1:exon
so has part: feature:1291258-1291358:-1:exon
so has part: feature:1290160-1290334:-1:exon
so has part: feature:1289371-1289559:-1:exon
so has part: feature:1289015-1289116:-1:exon
so has part: feature:1288056-1288196:-1:exon
so has part: feature:1286688-1286835:-1:exon
so has part: feature:1285428-1285816:-1:exon
so has part: feature:1284292-1285172:-1:exon
so has part: feature:1283210-1283345:-1:exon
so has part: feature:1281916-1282104:-1:exon
so has part: feature:1279230-1279469:-1:exon
so has part: feature:1278337-1278463:-1:exon
so has part: feature:1277651-1277822:-1:exon
so has part: feature:1276762-1277058:-1:exon
so has part: feature:1275579-1275680:-1:exon
so has part: feature:1274873-1275098:-1:exon
so has part: feature:1274464-1274638:-1:exon
so has part: feature:1273769-1273910:-1:exon
so has part: feature:1272821-1272832:-1:exon

XP_032054316.1
type: Protein
SIO_000068: ncbiprotein

position:1272821:-1
position: 1272821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1293383:-1
position: 1293383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1293295-1293383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1292454-1292626:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1291258-1291358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1290160-1290334:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1289371-1289559:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1289015-1289116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1288056-1288196:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1286688-1286835:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1285428-1285816:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1284292-1285172:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1283210-1283345:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1281916-1282104:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1279230-1279469:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1278337-1278463:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1277651-1277822:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1276762-1277058:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1275579-1275680:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1274873-1275098:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1274464-1274638:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1273769-1273910:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1272821-1272832:-1:exon

NCOA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: NCOA3
product: nuclear receptor coactivator 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198422.1
SIO_010081: NCOA3
subclass of: SO_0000673
so part of: NCOA3
location: complement(join(1273519..1273910,1274464..1274638,1274873..1275098,1275579..1275680,1276762..1277058,1277651..1277822,1278337..1278463,1279230..1279469,1281916..1282104,1283210..1283345,1284292..1285172,1285428..1285816,1286688..1286835,1288056..1288196,1289015..1289116,1289371..1289559,1290160..1290334,1291258..1291358,1292454..1292626,1293295..1293402,1298200..1298275,1334908..1334949,1354504..1354572))
location: region:1273519-1354572:-1
so has part: feature:1354504-1354572:-1:exon
so has part: feature:1334908-1334949:-1:exon
so has part: feature:1298200-1298275:-1:exon
so has part: feature:1293295-1293402:-1:exon
so has part: feature:1292454-1292626:-1:exon
so has part: feature:1291258-1291358:-1:exon
so has part: feature:1290160-1290334:-1:exon
so has part: feature:1289371-1289559:-1:exon
so has part: feature:1289015-1289116:-1:exon
so has part: feature:1288056-1288196:-1:exon
so has part: feature:1286688-1286835:-1:exon
so has part: feature:1285428-1285816:-1:exon
so has part: feature:1284292-1285172:-1:exon
so has part: feature:1283210-1283345:-1:exon
so has part: feature:1281916-1282104:-1:exon
so has part: feature:1279230-1279469:-1:exon
so has part: feature:1278337-1278463:-1:exon
so has part: feature:1277651-1277822:-1:exon
so has part: feature:1276762-1277058:-1:exon
so has part: feature:1275579-1275680:-1:exon
so has part: feature:1274873-1275098:-1:exon
so has part: feature:1274464-1274638:-1:exon
so has part: feature:1273519-1273910:-1:exon

position:1273519:-1
position: 1273519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1354504-1354572:-1:exon

position:1354504:-1
position: 1354504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1334908-1334949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1298200-1298275:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1293295-1293402:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1292454-1292626:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1291258-1291358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1290160-1290334:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1289371-1289559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1289015-1289116:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1288056-1288196:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1286688-1286835:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1285428-1285816:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1284292-1285172:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1283210-1283345:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1281916-1282104:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1279230-1279469:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1278337-1278463:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1277651-1277822:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1276762-1277058:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1275579-1275680:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1274873-1275098:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1274464-1274638:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1273519-1273910:-1:exon

NCOA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: NCOA3
product: nuclear receptor coactivator 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032198423.1
SIO_010081: NCOA3
subclass of: SO_0000673
so part of: NCOA3
location: complement(join(1273519..1273910,1274464..1274638,1274873..1275098,1275579..1275680,1276762..1277058,1277651..1277822,1278337..1278463,1279230..1279469,1281916..1282104,1283210..1283345,1284292..1285172,1285428..1285816,1286688..1286835,1288056..1288196,1289015..1289116,1289371..1289559,1290160..1290334,1291258..1291358,1292454..1292626,1293295..1293402,1298200..1298275,1334908..1334949,1353812..1353904))
location: region:1273519-1353904:-1
so has part: feature:1353812-1353904:-1:exon
so has part: feature:1334908-1334949:-1:exon
so has part: feature:1298200-1298275:-1:exon
so has part: feature:1293295-1293402:-1:exon
so has part: feature:1292454-1292626:-1:exon
so has part: feature:1291258-1291358:-1:exon
so has part: feature:1290160-1290334:-1:exon
so has part: feature:1289371-1289559:-1:exon
so has part: feature:1289015-1289116:-1:exon
so has part: feature:1288056-1288196:-1:exon
so has part: feature:1286688-1286835:-1:exon
so has part: feature:1285428-1285816:-1:exon
so has part: feature:1284292-1285172:-1:exon
so has part: feature:1283210-1283345:-1:exon
so has part: feature:1281916-1282104:-1:exon
so has part: feature:1279230-1279469:-1:exon
so has part: feature:1278337-1278463:-1:exon
so has part: feature:1277651-1277822:-1:exon
so has part: feature:1276762-1277058:-1:exon
so has part: feature:1275579-1275680:-1:exon
so has part: feature:1274873-1275098:-1:exon
so has part: feature:1274464-1274638:-1:exon
so has part: feature:1273519-1273910:-1:exon

position:1353904:-1
position: 1353904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1353812-1353904:-1:exon

position:1353812:-1
position: 1353812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1334908-1334949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1298200-1298275:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1293295-1293402:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1292454-1292626:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1291258-1291358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1290160-1290334:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1289371-1289559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1289015-1289116:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1288056-1288196:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1286688-1286835:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1285428-1285816:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1284292-1285172:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1283210-1283345:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1281916-1282104:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1279230-1279469:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1278337-1278463:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1277651-1277822:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1276762-1277058:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1275579-1275680:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1274873-1275098:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1274464-1274638:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1273519-1273910:-1:exon

NCOA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: NCOA3
product: nuclear receptor coactivator 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032198421.1
SIO_010081: NCOA3
subclass of: SO_0000673
so part of: NCOA3
location: complement(join(1273519..1273910,1274464..1274638,1274873..1275098,1275579..1275680,1276762..1277058,1277651..1277822,1278337..1278463,1279230..1279469,1281916..1282104,1283210..1283345,1284292..1285172,1285428..1285816,1286688..1286835,1288056..1288196,1289015..1289116,1289371..1289559,1290160..1290334,1291258..1291358,1292454..1292626,1293295..1293402,1298200..1298275,1334908..1334949,1339186..1339290))
location: region:1273519-1339290:-1
so has part: feature:1339186-1339290:-1:exon
so has part: feature:1334908-1334949:-1:exon
so has part: feature:1298200-1298275:-1:exon
so has part: feature:1293295-1293402:-1:exon
so has part: feature:1292454-1292626:-1:exon
so has part: feature:1291258-1291358:-1:exon
so has part: feature:1290160-1290334:-1:exon
so has part: feature:1289371-1289559:-1:exon
so has part: feature:1289015-1289116:-1:exon
so has part: feature:1288056-1288196:-1:exon
so has part: feature:1286688-1286835:-1:exon
so has part: feature:1285428-1285816:-1:exon
so has part: feature:1284292-1285172:-1:exon
so has part: feature:1283210-1283345:-1:exon
so has part: feature:1281916-1282104:-1:exon
so has part: feature:1279230-1279469:-1:exon
so has part: feature:1278337-1278463:-1:exon
so has part: feature:1277651-1277822:-1:exon
so has part: feature:1276762-1277058:-1:exon
so has part: feature:1275579-1275680:-1:exon
so has part: feature:1274873-1275098:-1:exon
so has part: feature:1274464-1274638:-1:exon
so has part: feature:1273519-1273910:-1:exon

position:1339290:-1
position: 1339290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1339186-1339290:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1334908-1334949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1298200-1298275:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1293295-1293402:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1292454-1292626:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1291258-1291358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1290160-1290334:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1289371-1289559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1289015-1289116:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1288056-1288196:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1286688-1286835:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1285428-1285816:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1284292-1285172:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1283210-1283345:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1281916-1282104:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1279230-1279469:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1278337-1278463:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1277651-1277822:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1276762-1277058:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1275579-1275680:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1274873-1275098:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1274464-1274638:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1273519-1273910:-1:exon

NCOA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: NCOA3
product: nuclear receptor coactivator 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032198424.1
SIO_010081: NCOA3
subclass of: SO_0000673
so part of: NCOA3
location: complement(join(1273519..1273910,1274464..1274638,1274873..1275098,1275579..1275680,1276762..1277058,1277651..1277822,1278337..1278463,1279230..1279469,1281916..1282104,1283210..1283345,1284292..1285172,1285428..1285816,1286688..1286835,1288056..1288196,1289015..1289116,1289371..1289559,1290160..1290334,1291258..1291358,1292454..1292626,1293295..1293402,1298200..1298275,1321145..1321304))
location: region:1273519-1321304:-1
so has part: feature:1321145-1321304:-1:exon
so has part: feature:1298200-1298275:-1:exon
so has part: feature:1293295-1293402:-1:exon
so has part: feature:1292454-1292626:-1:exon
so has part: feature:1291258-1291358:-1:exon
so has part: feature:1290160-1290334:-1:exon
so has part: feature:1289371-1289559:-1:exon
so has part: feature:1289015-1289116:-1:exon
so has part: feature:1288056-1288196:-1:exon
so has part: feature:1286688-1286835:-1:exon
so has part: feature:1285428-1285816:-1:exon
so has part: feature:1284292-1285172:-1:exon
so has part: feature:1283210-1283345:-1:exon
so has part: feature:1281916-1282104:-1:exon
so has part: feature:1279230-1279469:-1:exon
so has part: feature:1278337-1278463:-1:exon
so has part: feature:1277651-1277822:-1:exon
so has part: feature:1276762-1277058:-1:exon
so has part: feature:1275579-1275680:-1:exon
so has part: feature:1274873-1275098:-1:exon
so has part: feature:1274464-1274638:-1:exon
so has part: feature:1273519-1273910:-1:exon

position:1321304:-1
position: 1321304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1321145-1321304:-1:exon

position:1321145:-1
position: 1321145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1298200-1298275:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1293295-1293402:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1292454-1292626:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1291258-1291358:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1290160-1290334:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1289371-1289559:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1289015-1289116:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1288056-1288196:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1286688-1286835:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1285428-1285816:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1284292-1285172:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1283210-1283345:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1281916-1282104:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1279230-1279469:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1278337-1278463:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1277651-1277822:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1276762-1277058:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1275579-1275680:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1274873-1275098:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1274464-1274638:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1273519-1273910:-1:exon

NCOA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: NCOA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor coactivator 3 isoform X1
translation: MSGLGENSLDSLANESRKRKPLPCDTPGASLTCSGEKRRREQESKYIEELAELISANLSDIDNFNVKPDKCAILKETVRQIRQIKEQGKAVSNDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYGILHEEDRKDFLKNLPKSSVNGVAWTNETPRQKSHTFNCRMMVKTSHDLLEDVGSHQDTRQRYETMQCFALSQPRAMMEEGEDLQSCMICVARRITTAERVFPTNPESFITRHDLSGKLVNIDTNSLRSSMRPGFEDTIRRCIQRFLCHNDGQTWSNKRHYHEAYTQGHAETPLYRFSLADGTIVTAQTKSKLFRNPVTNDRHGFVSTHFLQREQNGYRPNPNTVGQNMRTPVAGNTNSVGGLMNMSPSQSMPLQNRNYGMGDPNTVSQLSNSRYGGPGSMGPVNSGPGMQSSAYQNNSYGLNISSPPHGSPGLTSNQQNIMISPRNRGSPKMSSHQFSPVTGMHSPMGSASNTSNSTFSSSSLSALQAISEGVGTSLLSTLSSPGPKLDNSPNMSVAQQNKASTQDSKSPSGLYCEQNQVESSLCQSNSRDLLSEKDSKEGSLETPESQRGQSESKGHKKLLQLLTCSSDERGHSTASNSPLESNCKESSTNVTSPSGVSSSTSGGVSSSSNMHGSLLQEKHRILHKLLQNGNSPAEVAKITAEATGKDTYHDTANTAPCGEGTVKQEQLSPKKKENNALLRYLLDKDDVKDPLSKELKPKVENVDNKMGQCSSSSIPTSSQEKDMKIKTEPTEEMSGDLDNLDAILGDLTSSEFYNNAMSTNGNSFGTKQALFQGNAPLSMRSPQSVQPTRPPFNRAMSLDSPVGSSAPVRNVNAFSMLQKQNLMGGSPRMIENQENFGANLVSAPNRSVAMNQHQSGDWGLPNSKVNRLEPTSSTSVMRPGPEFSASLPRPTAGSSMPGLPVRSNSIPGTRPMLQQQIIHMRSNEINVGLGGNPYGQPAPSNQPGSWPDNMLSMEQASRSSQNRQLVRNSLDDLLCAAPNVEGQNEERALLDQLHTLLSNTDVTSLEEIDRALGIPDLVNQGQALEAKQDSFQGQESAVMIDQKPSLYGQPYQGQGAALPGGFSNIQGQQPSFNSVMNQMSQQSNFPLQSMHPRANVMRPRTNTPKQLRMQLQQRLQGQQFMNQTRQALEMKMENPGSNTSVMRPVMQPQVASQQQGFLNAQMVAQRNRELISHHFRQQRMAMMMQQQQQPQAFSPPPNVTASGSMDSGLTGPPMAQVPPQQFSYPPNYGITQQPDPAFSRVSSPPNPMMSSRMGPSQNPMMQHPQAAAMYQSPEMKGWPSGSMTRSSSFPQQQFSHQGNPATYSMMHMNGSSGHLGQMNINTMPMSGMPMGPDQVSCP
SIO_010081: NCOA3
subclass of: SO_0000673
so part of: NCOA3
location: complement(join(1273754..1273910,1274464..1274638,1274873..1275098,1275579..1275680,1276762..1277058,1277651..1277822,1278337..1278463,1279230..1279469,1281916..1282104,1283210..1283345,1284292..1285172,1285428..1285816,1286688..1286835,1288056..1288196,1289015..1289116,1289371..1289559,1290160..1290334,1291258..1291358,1292454..1292626,1293295..1293383))
location: region:1273754-1293383:-1
so has part: feature:1293295-1293383:-1:exon
so has part: feature:1292454-1292626:-1:exon
so has part: feature:1291258-1291358:-1:exon
so has part: feature:1290160-1290334:-1:exon
so has part: feature:1289371-1289559:-1:exon
so has part: feature:1289015-1289116:-1:exon
so has part: feature:1288056-1288196:-1:exon
so has part: feature:1286688-1286835:-1:exon
so has part: feature:1285428-1285816:-1:exon
so has part: feature:1284292-1285172:-1:exon
so has part: feature:1283210-1283345:-1:exon
so has part: feature:1281916-1282104:-1:exon
so has part: feature:1279230-1279469:-1:exon
so has part: feature:1278337-1278463:-1:exon
so has part: feature:1277651-1277822:-1:exon
so has part: feature:1276762-1277058:-1:exon
so has part: feature:1275579-1275680:-1:exon
so has part: feature:1274873-1275098:-1:exon
so has part: feature:1274464-1274638:-1:exon
so has part: feature:1273754-1273910:-1:exon

XP_032054312.1
type: Protein
SIO_000068: ncbiprotein

position:1273754:-1
position: 1273754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1293295-1293383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1292454-1292626:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1291258-1291358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1290160-1290334:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1289371-1289559:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1289015-1289116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1288056-1288196:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1286688-1286835:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1285428-1285816:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1284292-1285172:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1283210-1283345:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1281916-1282104:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1279230-1279469:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1278337-1278463:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1277651-1277822:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1276762-1277058:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1275579-1275680:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1274873-1275098:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1274464-1274638:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1273754-1273910:-1:exon

NCOA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: NCOA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor coactivator 3 isoform X1
translation: MSGLGENSLDSLANESRKRKPLPCDTPGASLTCSGEKRRREQESKYIEELAELISANLSDIDNFNVKPDKCAILKETVRQIRQIKEQGKAVSNDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYGILHEEDRKDFLKNLPKSSVNGVAWTNETPRQKSHTFNCRMMVKTSHDLLEDVGSHQDTRQRYETMQCFALSQPRAMMEEGEDLQSCMICVARRITTAERVFPTNPESFITRHDLSGKLVNIDTNSLRSSMRPGFEDTIRRCIQRFLCHNDGQTWSNKRHYHEAYTQGHAETPLYRFSLADGTIVTAQTKSKLFRNPVTNDRHGFVSTHFLQREQNGYRPNPNTVGQNMRTPVAGNTNSVGGLMNMSPSQSMPLQNRNYGMGDPNTVSQLSNSRYGGPGSMGPVNSGPGMQSSAYQNNSYGLNISSPPHGSPGLTSNQQNIMISPRNRGSPKMSSHQFSPVTGMHSPMGSASNTSNSTFSSSSLSALQAISEGVGTSLLSTLSSPGPKLDNSPNMSVAQQNKASTQDSKSPSGLYCEQNQVESSLCQSNSRDLLSEKDSKEGSLETPESQRGQSESKGHKKLLQLLTCSSDERGHSTASNSPLESNCKESSTNVTSPSGVSSSTSGGVSSSSNMHGSLLQEKHRILHKLLQNGNSPAEVAKITAEATGKDTYHDTANTAPCGEGTVKQEQLSPKKKENNALLRYLLDKDDVKDPLSKELKPKVENVDNKMGQCSSSSIPTSSQEKDMKIKTEPTEEMSGDLDNLDAILGDLTSSEFYNNAMSTNGNSFGTKQALFQGNAPLSMRSPQSVQPTRPPFNRAMSLDSPVGSSAPVRNVNAFSMLQKQNLMGGSPRMIENQENFGANLVSAPNRSVAMNQHQSGDWGLPNSKVNRLEPTSSTSVMRPGPEFSASLPRPTAGSSMPGLPVRSNSIPGTRPMLQQQIIHMRSNEINVGLGGNPYGQPAPSNQPGSWPDNMLSMEQASRSSQNRQLVRNSLDDLLCAAPNVEGQNEERALLDQLHTLLSNTDVTSLEEIDRALGIPDLVNQGQALEAKQDSFQGQESAVMIDQKPSLYGQPYQGQGAALPGGFSNIQGQQPSFNSVMNQMSQQSNFPLQSMHPRANVMRPRTNTPKQLRMQLQQRLQGQQFMNQTRQALEMKMENPGSNTSVMRPVMQPQVASQQQGFLNAQMVAQRNRELISHHFRQQRMAMMMQQQQQPQAFSPPPNVTASGSMDSGLTGPPMAQVPPQQFSYPPNYGITQQPDPAFSRVSSPPNPMMSSRMGPSQNPMMQHPQAAAMYQSPEMKGWPSGSMTRSSSFPQQQFSHQGNPATYSMMHMNGSSGHLGQMNINTMPMSGMPMGPDQVSCP
SIO_010081: NCOA3
subclass of: SO_0000673
so part of: NCOA3
location: complement(join(1273754..1273910,1274464..1274638,1274873..1275098,1275579..1275680,1276762..1277058,1277651..1277822,1278337..1278463,1279230..1279469,1281916..1282104,1283210..1283345,1284292..1285172,1285428..1285816,1286688..1286835,1288056..1288196,1289015..1289116,1289371..1289559,1290160..1290334,1291258..1291358,1292454..1292626,1293295..1293383))
location: region:1273754-1293383:-1
so has part: feature:1293295-1293383:-1:exon
so has part: feature:1292454-1292626:-1:exon
so has part: feature:1291258-1291358:-1:exon
so has part: feature:1290160-1290334:-1:exon
so has part: feature:1289371-1289559:-1:exon
so has part: feature:1289015-1289116:-1:exon
so has part: feature:1288056-1288196:-1:exon
so has part: feature:1286688-1286835:-1:exon
so has part: feature:1285428-1285816:-1:exon
so has part: feature:1284292-1285172:-1:exon
so has part: feature:1283210-1283345:-1:exon
so has part: feature:1281916-1282104:-1:exon
so has part: feature:1279230-1279469:-1:exon
so has part: feature:1278337-1278463:-1:exon
so has part: feature:1277651-1277822:-1:exon
so has part: feature:1276762-1277058:-1:exon
so has part: feature:1275579-1275680:-1:exon
so has part: feature:1274873-1275098:-1:exon
so has part: feature:1274464-1274638:-1:exon
so has part: feature:1273754-1273910:-1:exon

XP_032054313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1293295-1293383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1292454-1292626:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1291258-1291358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1290160-1290334:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1289371-1289559:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1289015-1289116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1288056-1288196:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1286688-1286835:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1285428-1285816:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1284292-1285172:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1283210-1283345:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1281916-1282104:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1279230-1279469:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1278337-1278463:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1277651-1277822:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1276762-1277058:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1275579-1275680:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1274873-1275098:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1274464-1274638:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1273754-1273910:-1:exon

NCOA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: NCOA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor coactivator 3 isoform X1
translation: MSGLGENSLDSLANESRKRKPLPCDTPGASLTCSGEKRRREQESKYIEELAELISANLSDIDNFNVKPDKCAILKETVRQIRQIKEQGKAVSNDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYGILHEEDRKDFLKNLPKSSVNGVAWTNETPRQKSHTFNCRMMVKTSHDLLEDVGSHQDTRQRYETMQCFALSQPRAMMEEGEDLQSCMICVARRITTAERVFPTNPESFITRHDLSGKLVNIDTNSLRSSMRPGFEDTIRRCIQRFLCHNDGQTWSNKRHYHEAYTQGHAETPLYRFSLADGTIVTAQTKSKLFRNPVTNDRHGFVSTHFLQREQNGYRPNPNTVGQNMRTPVAGNTNSVGGLMNMSPSQSMPLQNRNYGMGDPNTVSQLSNSRYGGPGSMGPVNSGPGMQSSAYQNNSYGLNISSPPHGSPGLTSNQQNIMISPRNRGSPKMSSHQFSPVTGMHSPMGSASNTSNSTFSSSSLSALQAISEGVGTSLLSTLSSPGPKLDNSPNMSVAQQNKASTQDSKSPSGLYCEQNQVESSLCQSNSRDLLSEKDSKEGSLETPESQRGQSESKGHKKLLQLLTCSSDERGHSTASNSPLESNCKESSTNVTSPSGVSSSTSGGVSSSSNMHGSLLQEKHRILHKLLQNGNSPAEVAKITAEATGKDTYHDTANTAPCGEGTVKQEQLSPKKKENNALLRYLLDKDDVKDPLSKELKPKVENVDNKMGQCSSSSIPTSSQEKDMKIKTEPTEEMSGDLDNLDAILGDLTSSEFYNNAMSTNGNSFGTKQALFQGNAPLSMRSPQSVQPTRPPFNRAMSLDSPVGSSAPVRNVNAFSMLQKQNLMGGSPRMIENQENFGANLVSAPNRSVAMNQHQSGDWGLPNSKVNRLEPTSSTSVMRPGPEFSASLPRPTAGSSMPGLPVRSNSIPGTRPMLQQQIIHMRSNEINVGLGGNPYGQPAPSNQPGSWPDNMLSMEQASRSSQNRQLVRNSLDDLLCAAPNVEGQNEERALLDQLHTLLSNTDVTSLEEIDRALGIPDLVNQGQALEAKQDSFQGQESAVMIDQKPSLYGQPYQGQGAALPGGFSNIQGQQPSFNSVMNQMSQQSNFPLQSMHPRANVMRPRTNTPKQLRMQLQQRLQGQQFMNQTRQALEMKMENPGSNTSVMRPVMQPQVASQQQGFLNAQMVAQRNRELISHHFRQQRMAMMMQQQQQPQAFSPPPNVTASGSMDSGLTGPPMAQVPPQQFSYPPNYGITQQPDPAFSRVSSPPNPMMSSRMGPSQNPMMQHPQAAAMYQSPEMKGWPSGSMTRSSSFPQQQFSHQGNPATYSMMHMNGSSGHLGQMNINTMPMSGMPMGPDQVSCP
SIO_010081: NCOA3
subclass of: SO_0000673
so part of: NCOA3
location: complement(join(1273754..1273910,1274464..1274638,1274873..1275098,1275579..1275680,1276762..1277058,1277651..1277822,1278337..1278463,1279230..1279469,1281916..1282104,1283210..1283345,1284292..1285172,1285428..1285816,1286688..1286835,1288056..1288196,1289015..1289116,1289371..1289559,1290160..1290334,1291258..1291358,1292454..1292626,1293295..1293383))
location: region:1273754-1293383:-1
so has part: feature:1293295-1293383:-1:exon
so has part: feature:1292454-1292626:-1:exon
so has part: feature:1291258-1291358:-1:exon
so has part: feature:1290160-1290334:-1:exon
so has part: feature:1289371-1289559:-1:exon
so has part: feature:1289015-1289116:-1:exon
so has part: feature:1288056-1288196:-1:exon
so has part: feature:1286688-1286835:-1:exon
so has part: feature:1285428-1285816:-1:exon
so has part: feature:1284292-1285172:-1:exon
so has part: feature:1283210-1283345:-1:exon
so has part: feature:1281916-1282104:-1:exon
so has part: feature:1279230-1279469:-1:exon
so has part: feature:1278337-1278463:-1:exon
so has part: feature:1277651-1277822:-1:exon
so has part: feature:1276762-1277058:-1:exon
so has part: feature:1275579-1275680:-1:exon
so has part: feature:1274873-1275098:-1:exon
so has part: feature:1274464-1274638:-1:exon
so has part: feature:1273754-1273910:-1:exon

XP_032054314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1293295-1293383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1292454-1292626:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1291258-1291358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1290160-1290334:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1289371-1289559:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1289015-1289116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1288056-1288196:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1286688-1286835:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1285428-1285816:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1284292-1285172:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1283210-1283345:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1281916-1282104:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1279230-1279469:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1278337-1278463:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1277651-1277822:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1276762-1277058:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1275579-1275680:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1274873-1275098:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1274464-1274638:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1273754-1273910:-1:exon

NCOA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: NCOA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor coactivator 3 isoform X1
translation: MSGLGENSLDSLANESRKRKPLPCDTPGASLTCSGEKRRREQESKYIEELAELISANLSDIDNFNVKPDKCAILKETVRQIRQIKEQGKAVSNDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYGILHEEDRKDFLKNLPKSSVNGVAWTNETPRQKSHTFNCRMMVKTSHDLLEDVGSHQDTRQRYETMQCFALSQPRAMMEEGEDLQSCMICVARRITTAERVFPTNPESFITRHDLSGKLVNIDTNSLRSSMRPGFEDTIRRCIQRFLCHNDGQTWSNKRHYHEAYTQGHAETPLYRFSLADGTIVTAQTKSKLFRNPVTNDRHGFVSTHFLQREQNGYRPNPNTVGQNMRTPVAGNTNSVGGLMNMSPSQSMPLQNRNYGMGDPNTVSQLSNSRYGGPGSMGPVNSGPGMQSSAYQNNSYGLNISSPPHGSPGLTSNQQNIMISPRNRGSPKMSSHQFSPVTGMHSPMGSASNTSNSTFSSSSLSALQAISEGVGTSLLSTLSSPGPKLDNSPNMSVAQQNKASTQDSKSPSGLYCEQNQVESSLCQSNSRDLLSEKDSKEGSLETPESQRGQSESKGHKKLLQLLTCSSDERGHSTASNSPLESNCKESSTNVTSPSGVSSSTSGGVSSSSNMHGSLLQEKHRILHKLLQNGNSPAEVAKITAEATGKDTYHDTANTAPCGEGTVKQEQLSPKKKENNALLRYLLDKDDVKDPLSKELKPKVENVDNKMGQCSSSSIPTSSQEKDMKIKTEPTEEMSGDLDNLDAILGDLTSSEFYNNAMSTNGNSFGTKQALFQGNAPLSMRSPQSVQPTRPPFNRAMSLDSPVGSSAPVRNVNAFSMLQKQNLMGGSPRMIENQENFGANLVSAPNRSVAMNQHQSGDWGLPNSKVNRLEPTSSTSVMRPGPEFSASLPRPTAGSSMPGLPVRSNSIPGTRPMLQQQIIHMRSNEINVGLGGNPYGQPAPSNQPGSWPDNMLSMEQASRSSQNRQLVRNSLDDLLCAAPNVEGQNEERALLDQLHTLLSNTDVTSLEEIDRALGIPDLVNQGQALEAKQDSFQGQESAVMIDQKPSLYGQPYQGQGAALPGGFSNIQGQQPSFNSVMNQMSQQSNFPLQSMHPRANVMRPRTNTPKQLRMQLQQRLQGQQFMNQTRQALEMKMENPGSNTSVMRPVMQPQVASQQQGFLNAQMVAQRNRELISHHFRQQRMAMMMQQQQQPQAFSPPPNVTASGSMDSGLTGPPMAQVPPQQFSYPPNYGITQQPDPAFSRVSSPPNPMMSSRMGPSQNPMMQHPQAAAMYQSPEMKGWPSGSMTRSSSFPQQQFSHQGNPATYSMMHMNGSSGHLGQMNINTMPMSGMPMGPDQVSCP
SIO_010081: NCOA3
subclass of: SO_0000673
so part of: NCOA3
location: complement(join(1273754..1273910,1274464..1274638,1274873..1275098,1275579..1275680,1276762..1277058,1277651..1277822,1278337..1278463,1279230..1279469,1281916..1282104,1283210..1283345,1284292..1285172,1285428..1285816,1286688..1286835,1288056..1288196,1289015..1289116,1289371..1289559,1290160..1290334,1291258..1291358,1292454..1292626,1293295..1293383))
location: region:1273754-1293383:-1
so has part: feature:1293295-1293383:-1:exon
so has part: feature:1292454-1292626:-1:exon
so has part: feature:1291258-1291358:-1:exon
so has part: feature:1290160-1290334:-1:exon
so has part: feature:1289371-1289559:-1:exon
so has part: feature:1289015-1289116:-1:exon
so has part: feature:1288056-1288196:-1:exon
so has part: feature:1286688-1286835:-1:exon
so has part: feature:1285428-1285816:-1:exon
so has part: feature:1284292-1285172:-1:exon
so has part: feature:1283210-1283345:-1:exon
so has part: feature:1281916-1282104:-1:exon
so has part: feature:1279230-1279469:-1:exon
so has part: feature:1278337-1278463:-1:exon
so has part: feature:1277651-1277822:-1:exon
so has part: feature:1276762-1277058:-1:exon
so has part: feature:1275579-1275680:-1:exon
so has part: feature:1274873-1275098:-1:exon
so has part: feature:1274464-1274638:-1:exon
so has part: feature:1273754-1273910:-1:exon

XP_032054315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1293295-1293383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1292454-1292626:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1291258-1291358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1290160-1290334:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1289371-1289559:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1289015-1289116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1288056-1288196:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1286688-1286835:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1285428-1285816:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1284292-1285172:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1283210-1283345:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1281916-1282104:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1279230-1279469:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1278337-1278463:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1277651-1277822:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1276762-1277058:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1275579-1275680:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1274873-1275098:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1274464-1274638:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1273754-1273910:-1:exon

LOC116495779
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116495779
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1359670..1376464)
location: region:1359670-1376464:-1
so has part: feature:1359670-1376464:-1:exon
subclass of: SO_0000010

116495779
type: Gene
SIO_000068: ncbigene

position:1359670:-1
position: 1359670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1376464:-1
position: 1376464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1359670-1376464:-1:exon

LOC116495779
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116495779
product: translocating chain-associated membrane protein 1-like 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032198487.1
SIO_010081: LOC116495779
subclass of: SO_0000673
so part of: LOC116495779
location: complement(join(1359670..1361635,1364649..1364809,1365559..1365702,1367221..1367326,1367415..1367485,1367787..1367869,1368645..1368698,1368784..1368908,1369335..1369453,1370970..1371030,1376318..1376464))
location: region:1359670-1376464:-1
so has part: feature:1376318-1376464:-1:exon
so has part: feature:1370970-1371030:-1:exon
so has part: feature:1369335-1369453:-1:exon
so has part: feature:1368784-1368908:-1:exon
so has part: feature:1368645-1368698:-1:exon
so has part: feature:1367787-1367869:-1:exon
so has part: feature:1367415-1367485:-1:exon
so has part: feature:1367221-1367326:-1:exon
so has part: feature:1365559-1365702:-1:exon
so has part: feature:1364649-1364809:-1:exon
so has part: feature:1359670-1361635:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1376318-1376464:-1:exon

position:1376318:-1
position: 1376318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1370970-1371030:-1:exon

position:1370970:-1
position: 1370970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1371030:-1
position: 1371030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1369335-1369453:-1:exon

position:1369335:-1
position: 1369335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1369453:-1
position: 1369453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1368784-1368908:-1:exon

position:1368784:-1
position: 1368784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1368908:-1
position: 1368908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1368645-1368698:-1:exon

position:1368645:-1
position: 1368645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1368698:-1
position: 1368698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1367787-1367869:-1:exon

position:1367787:-1
position: 1367787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1367869:-1
position: 1367869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1367415-1367485:-1:exon

position:1367415:-1
position: 1367415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1367485:-1
position: 1367485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1367221-1367326:-1:exon

position:1367221:-1
position: 1367221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1367326:-1
position: 1367326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1365559-1365702:-1:exon

position:1365559:-1
position: 1365559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1365702:-1
position: 1365702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1364649-1364809:-1:exon

position:1364649:-1
position: 1364649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1364809:-1
position: 1364809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1359670-1361635:-1:exon

position:1361635:-1
position: 1361635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116495779
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116495779
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: translocating chain-associated membrane protein 1-like 1
translation: MGLRRKGRSPPVLSPEFVLQNHADAASYLAVGILLGLMFEVTAKYVIIFITVQYNVTYTIDDKSEHVNFYEYGPKDIATIFFYMLIAIILHAVIQDYILDKINRRLHLSNTKHSKFNESGQLAFFYLFSFVWGASILNAVSKTHGEPNLLWKDYPHSRMLFQVKFFYICQIAYWLHALXRTILQKIRKEDIPRQLCYICLYIAHISGAYILNLQAFGLILMVPHYLVELIFHASRLFYFSDENKQKGFTIWALLFVMVRLLTLTLFVLTFGFGLAKVENPGFSIADGNFNVLSVRISCLGAVCLTQAWMMWKFINFQLKKWREHIKKQIPKKKITNTKNKLTKKELSRANIINGAAKLEDGASPRIRK
SIO_010081: LOC116495779
subclass of: SO_0000673
so part of: LOC116495779
location: complement(join(1361574..1361635,1364649..1364809,1365559..1365702,1367221..1367326,1367415..1367485,1367787..1367869,1368645..1368698,1368784..1368908,1369335..1369453,1370970..1371030,1376318..1376437))
location: region:1361574-1376437:-1
so has part: feature:1376318-1376437:-1:exon
so has part: feature:1370970-1371030:-1:exon
so has part: feature:1369335-1369453:-1:exon
so has part: feature:1368784-1368908:-1:exon
so has part: feature:1368645-1368698:-1:exon
so has part: feature:1367787-1367869:-1:exon
so has part: feature:1367415-1367485:-1:exon
so has part: feature:1367221-1367326:-1:exon
so has part: feature:1365559-1365702:-1:exon
so has part: feature:1364649-1364809:-1:exon
so has part: feature:1361574-1361635:-1:exon

XP_032054378.1
type: Protein
SIO_000068: ncbiprotein

position:1361574:-1
position: 1361574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1376437:-1
position: 1376437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1376318-1376437:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1370970-1371030:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1369335-1369453:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1368784-1368908:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1368645-1368698:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1367787-1367869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1367415-1367485:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1367221-1367326:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1365559-1365702:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1364649-1364809:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1361574-1361635:-1:exon

ZMYND8
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: ZMYND8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1397124..1460707
location: region:1397124-1460707:1
so has part: feature:1397124-1460707:1:exon
subclass of: SO_0000010

116495895
type: Gene
SIO_000068: ncbigene

position:1397124:1
position: 1397124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1460707:1
position: 1460707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1397124-1460707:1:exon

ZMYND8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ZMYND8
product: zinc finger MYND-type containing 8, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198628.1
SIO_010081: ZMYND8
subclass of: SO_0000673
so part of: ZMYND8
location: join(1397124..1397188,1398211..1398260,1407960..1408030,1422272..1422420,1425906..1426124,1427007..1427120,1428400..1428492,1429650..1429737,1430305..1430360,1431516..1431593,1431990..1432105,1433183..1433664,1436034..1436174,1444531..1444683,1445501..1446004,1448198..1448572,1450624..1450814,1451713..1451793,1452373..1452451,1452893..1453132,1453301..1453458,1458159..1458523)
location: region:1397124-1458523:1
so has part: feature:1397124-1397188:1:exon
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SIO_000300: 18
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ZMYND8
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 219594
gene: ZMYND8
product: zinc finger MYND-type containing 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004253968.1
SIO_010081: ZMYND8
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urn:…
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SIO_000300: 20
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SIO_000300: 21
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position:1458442:1
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reference: sequence
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urn:…
SIO_000300: 22
SIO_000628: feature:1459091-1460707:1:exon

position:1459091:1
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reference: sequence
type: ForwardStrandPosition
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ZMYND8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ZMYND8
product: zinc finger MYND-type containing 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198626.1
SIO_010081: ZMYND8
subclass of: SO_0000673
so part of: ZMYND8
location: join(1397125..1397188,1407960..1408030,1422272..1422420,1425906..1426124,1427007..1427120,1428400..1428492,1429650..1429737,1430305..1430360,1431516..1431593,1431990..1432105,1433183..1433664,1436034..1436174,1444531..1444683,1445501..1446004,1448198..1448572,1450624..1450814,1451713..1451793,1452373..1452451,1452893..1453132,1453301..1453458,1458159..1458523)
location: region:1397125-1458523:1
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urn:…
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SIO_000628: feature:1433183-1433664:1:exon

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SIO_000300: 13
SIO_000628: feature:1444531-1444683:1:exon

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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
SIO_000628: feature:1458159-1458523:1:exon

ZMYND8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ZMYND8
product: zinc finger MYND-type containing 8, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198630.1
SIO_010081: ZMYND8
subclass of: SO_0000673
so part of: ZMYND8
location: join(1397125..1397188,1407960..1408030,1422272..1422420,1425981..1426124,1427007..1427120,1428400..1428492,1429650..1429737,1430305..1430360,1431516..1431593,1431990..1432105,1433183..1433664,1436034..1436174,1444531..1444683,1445501..1446004,1448198..1448572,1450624..1450814,1451713..1451793,1452373..1452451,1452893..1453132,1453301..1453458,1458159..1458523)
location: region:1397125-1458523:1
so has part: feature:1397125-1397188:1:exon
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 4
SIO_000628: feature:1425981-1426124:1:exon

position:1425981:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 5
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urn:…
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SIO_000300: 15
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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
SIO_000628: feature:1458159-1458523:1:exon

ZMYND8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ZMYND8
product: zinc finger MYND-type containing 8, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198631.1
SIO_010081: ZMYND8
subclass of: SO_0000673
so part of: ZMYND8
location: join(1397125..1397188,1407960..1408030,1422272..1422420,1425906..1426124,1427007..1427120,1428400..1428492,1429650..1429737,1430305..1430360,1431516..1431593,1431990..1432105,1433183..1433664,1436034..1436174,1444531..1444683,1445501..1446004,1448198..1448572,1450624..1450814,1451713..1451793,1452373..1452451,1452893..1453132,1453301..1453458,1453825..1454972)
location: region:1397125-1454972:1
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so has part: feature:1445501-1446004:1:exon
so has part: feature:1448198-1448572:1:exon
so has part: feature:1450624-1450814:1:exon
so has part: feature:1451713-1451793:1:exon
so has part: feature:1452373-1452451:1:exon
so has part: feature:1452893-1453132:1:exon
so has part: feature:1453301-1453458:1:exon
so has part: feature:1453825-1454972:1:exon

position:1454972:1
position: 1454972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1397125-1397188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1407960-1408030:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1422272-1422420:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1425906-1426124:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1427007-1427120:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1428400-1428492:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1429650-1429737:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1430305-1430360:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1431516-1431593:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1431990-1432105:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1433183-1433664:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1436034-1436174:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1444531-1444683:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1445501-1446004:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1448198-1448572:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1450624-1450814:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1451713-1451793:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1452373-1452451:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1452893-1453132:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1453301-1453458:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1453825-1454972:1:exon

position:1453825:1
position: 1453825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZMYND8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ZMYND8
product: zinc finger MYND-type containing 8, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198627.1
SIO_010081: ZMYND8
subclass of: SO_0000673
so part of: ZMYND8
location: join(1397137..1397188,1398049..1398260,1407960..1408030,1422272..1422420,1425906..1426124,1427007..1427120,1428400..1428492,1429650..1429737,1430305..1430360,1431516..1431593,1431990..1432105,1433183..1433664,1436034..1436174,1444531..1444683,1445501..1446004,1448198..1448572,1450624..1450814,1451713..1451793,1452373..1452451,1452893..1453132,1453301..1453458,1458159..1458523)
location: region:1397137-1458523:1
so has part: feature:1397137-1397188:1:exon
so has part: feature:1398049-1398260:1:exon
so has part: feature:1407960-1408030:1:exon
so has part: feature:1422272-1422420:1:exon
so has part: feature:1425906-1426124:1:exon
so has part: feature:1427007-1427120:1:exon
so has part: feature:1428400-1428492:1:exon
so has part: feature:1429650-1429737:1:exon
so has part: feature:1430305-1430360:1:exon
so has part: feature:1431516-1431593:1:exon
so has part: feature:1431990-1432105:1:exon
so has part: feature:1433183-1433664:1:exon
so has part: feature:1436034-1436174:1:exon
so has part: feature:1444531-1444683:1:exon
so has part: feature:1445501-1446004:1:exon
so has part: feature:1448198-1448572:1:exon
so has part: feature:1450624-1450814:1:exon
so has part: feature:1451713-1451793:1:exon
so has part: feature:1452373-1452451:1:exon
so has part: feature:1452893-1453132:1:exon
so has part: feature:1453301-1453458:1:exon
so has part: feature:1458159-1458523:1:exon

position:1397137:1
position: 1397137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1397137-1397188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1398049-1398260:1:exon

position:1398049:1
position: 1398049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1407960-1408030:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1422272-1422420:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1425906-1426124:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1427007-1427120:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1428400-1428492:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1429650-1429737:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1430305-1430360:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1431516-1431593:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1431990-1432105:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1433183-1433664:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1436034-1436174:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1444531-1444683:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1445501-1446004:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1448198-1448572:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1450624-1450814:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1451713-1451793:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1452373-1452451:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1452893-1453132:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1453301-1453458:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1458159-1458523:1:exon

ZMYND8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: ZMYND8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein kinase C-binding protein 1 isoform X1
translation: MHPQSLAEEEIKAEQEVVEGMDISTRSKDPGSVERTAQKRKFPSPPHSSNGHSPQDASTSPIKKKKKPGLLNSNNKEQSELRHGPFYYMKQPLTTDPVDVVPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLKLTAEPEGDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLKFALQKMKQPGTEPFQKPVSLDQHPDYAEYIFHPMDLCTLEKNVKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQTAKVIIKICEHEMNEIEVCPECYLAACQKRENWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVDNIRRKFGVFNYAPFRTPYTPNNQYQMLLDPANPTAGTAKTDKQEKIKLNFDMTASPKILMSKPMLSSSTGRRISLTDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFTEKNTASPAPTRTGQAGSLSGSPKPFSPQASTPISAKQERTSTPGSILNLNLDRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEAVYTAVEHSDSEDSEKSDTSDSEYSDEDQKSKNDQEDGEDKEGTRSDKESMSLKKKPKPPAQNEDKEELKSTSPEVEKTDDPVKEKAITDTEKEFSEKGKSLQHPAKEKLKGKDETDSPTVHLGLDSDSESELVIDLGDDHCGREGRKNKKESKEPPPKQDVVGKTPPSSSASTQPLPETPVLTRSAAQTPPAGVTATTSTTSTVSAPSAATGSPVKKQRPLLPKETAPAVQRVVWNSSNKFQTSSQKWHMQKMQRQQQQQQNQQSQSQQPQSSQGTRYQTRQAVKAVQQKEITQSTSTSTITLVTSTQPISMVTSSGSANTLSSSVNTDLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLEMEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSATATQQETDNEISTETLNKTSQPSSSVQPTPTETASTPKEKEVSSDKSKESVTTIPVVVSPSAGTVAMRTGVQYVQTTMPVQVRRV
SIO_010081: ZMYND8
subclass of: SO_0000673
so part of: ZMYND8
location: join(1397175..1397188,1407960..1408030,1422272..1422420,1425906..1426124,1427007..1427120,1428400..1428492,1429650..1429737,1430305..1430360,1431516..1431593,1431990..1432105,1433183..1433664,1436034..1436174,1444531..1444683,1445501..1446004,1448198..1448572,1450624..1450814,1451713..1451793,1452373..1452451,1452893..1453132,1453301..1453458,1458159..1458260)
location: region:1397175-1458260:1
so has part: feature:1397175-1397188:1:exon
so has part: feature:1407960-1408030:1:exon
so has part: feature:1422272-1422420:1:exon
so has part: feature:1425906-1426124:1:exon
so has part: feature:1427007-1427120:1:exon
so has part: feature:1428400-1428492:1:exon
so has part: feature:1429650-1429737:1:exon
so has part: feature:1430305-1430360:1:exon
so has part: feature:1431516-1431593:1:exon
so has part: feature:1431990-1432105:1:exon
so has part: feature:1433183-1433664:1:exon
so has part: feature:1436034-1436174:1:exon
so has part: feature:1444531-1444683:1:exon
so has part: feature:1445501-1446004:1:exon
so has part: feature:1448198-1448572:1:exon
so has part: feature:1450624-1450814:1:exon
so has part: feature:1451713-1451793:1:exon
so has part: feature:1452373-1452451:1:exon
so has part: feature:1452893-1453132:1:exon
so has part: feature:1453301-1453458:1:exon
so has part: feature:1458159-1458260:1:exon

XP_032054517.1
type: Protein
SIO_000068: ncbiprotein

position:1397175:1
position: 1397175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1458260:1
position: 1458260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1397175-1397188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1407960-1408030:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1422272-1422420:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1425906-1426124:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1427007-1427120:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1428400-1428492:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1429650-1429737:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1430305-1430360:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1431516-1431593:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1431990-1432105:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1433183-1433664:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1436034-1436174:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1444531-1444683:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1445501-1446004:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1448198-1448572:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1450624-1450814:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1451713-1451793:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1452373-1452451:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1452893-1453132:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1453301-1453458:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1458159-1458260:1:exon

ZMYND8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: ZMYND8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein kinase C-binding protein 1 isoform X3
translation: MHPQSLAEEEIKAEQEVVEGMDISTRSKDPGSVERTAQKRKFPSPPHSSNGHSPQDASTSPIKKKKKPGLLNSNNKEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLKLTAEPEGDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLKFALQKMKQPGTEPFQKPVSLDQHPDYAEYIFHPMDLCTLEKNVKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQTAKVIIKICEHEMNEIEVCPECYLAACQKRENWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVDNIRRKFGVFNYAPFRTPYTPNNQYQMLLDPANPTAGTAKTDKQEKIKLNFDMTASPKILMSKPMLSSSTGRRISLTDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFTEKNTASPAPTRTGQAGSLSGSPKPFSPQASTPISAKQERTSTPGSILNLNLDRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEAVYTAVEHSDSEDSEKSDTSDSEYSDEDQKSKNDQEDGEDKEGTRSDKESMSLKKKPKPPAQNEDKEELKSTSPEVEKTDDPVKEKAITDTEKEFSEKGKSLQHPAKEKLKGKDETDSPTVHLGLDSDSESELVIDLGDDHCGREGRKNKKESKEPPPKQDVVGKTPPSSSASTQPLPETPVLTRSAAQTPPAGVTATTSTTSTVSAPSAATGSPVKKQRPLLPKETAPAVQRVVWNSSNKFQTSSQKWHMQKMQRQQQQQQNQQSQSQQPQSSQGTRYQTRQAVKAVQQKEITQSTSTSTITLVTSTQPISMVTSSGSANTLSSSVNTDLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLEMEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSATATQQETDNEISTETLNKTSQPSSSVQPTPTETASTPKEKEVSSDKSKESVTTIPVVVSPSAGTVAMRTGVQYVQTTMPVQVRRV
SIO_010081: ZMYND8
subclass of: SO_0000673
so part of: ZMYND8
location: join(1397175..1397188,1407960..1408030,1422272..1422420,1425981..1426124,1427007..1427120,1428400..1428492,1429650..1429737,1430305..1430360,1431516..1431593,1431990..1432105,1433183..1433664,1436034..1436174,1444531..1444683,1445501..1446004,1448198..1448572,1450624..1450814,1451713..1451793,1452373..1452451,1452893..1453132,1453301..1453458,1458159..1458260)
location: region:1397175-1458260:1
so has part: feature:1397175-1397188:1:exon
so has part: feature:1407960-1408030:1:exon
so has part: feature:1422272-1422420:1:exon
so has part: feature:1425981-1426124:1:exon
so has part: feature:1427007-1427120:1:exon
so has part: feature:1428400-1428492:1:exon
so has part: feature:1429650-1429737:1:exon
so has part: feature:1430305-1430360:1:exon
so has part: feature:1431516-1431593:1:exon
so has part: feature:1431990-1432105:1:exon
so has part: feature:1433183-1433664:1:exon
so has part: feature:1436034-1436174:1:exon
so has part: feature:1444531-1444683:1:exon
so has part: feature:1445501-1446004:1:exon
so has part: feature:1448198-1448572:1:exon
so has part: feature:1450624-1450814:1:exon
so has part: feature:1451713-1451793:1:exon
so has part: feature:1452373-1452451:1:exon
so has part: feature:1452893-1453132:1:exon
so has part: feature:1453301-1453458:1:exon
so has part: feature:1458159-1458260:1:exon

XP_032054521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1397175-1397188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1407960-1408030:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1422272-1422420:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1425981-1426124:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1427007-1427120:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1428400-1428492:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1429650-1429737:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1430305-1430360:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1431516-1431593:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1431990-1432105:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1433183-1433664:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1436034-1436174:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1444531-1444683:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1445501-1446004:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1448198-1448572:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1450624-1450814:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1451713-1451793:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1452373-1452451:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1452893-1453132:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1453301-1453458:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1458159-1458260:1:exon

ZMYND8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: ZMYND8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein kinase C-binding protein 1 isoform X4
translation: MHPQSLAEEEIKAEQEVVEGMDISTRSKDPGSVERTAQKRKFPSPPHSSNGHSPQDASTSPIKKKKKPGLLNSNNKEQSELRHGPFYYMKQPLTTDPVDVVPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLKLTAEPEGDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLKFALQKMKQPGTEPFQKPVSLDQHPDYAEYIFHPMDLCTLEKNVKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQTAKVIIKICEHEMNEIEVCPECYLAACQKRENWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVDNIRRKFGVFNYAPFRTPYTPNNQYQMLLDPANPTAGTAKTDKQEKIKLNFDMTASPKILMSKPMLSSSTGRRISLTDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFTEKNTASPAPTRTGQAGSLSGSPKPFSPQASTPISAKQERTSTPGSILNLNLDRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEAVYTAVEHSDSEDSEKSDTSDSEYSDEDQKSKNDQEDGEDKEGTRSDKESMSLKKKPKPPAQNEDKEELKSTSPEVEKTDDPVKEKAITDTEKEFSEKGKSLQHPAKEKLKGKDETDSPTVHLGLDSDSESELVIDLGDDHCGREGRKNKKESKEPPPKQDVVGKTPPSSSASTQPLPETPVLTRSAAQTPPAGVTATTSTTSTVSAPSAATGSPVKKQRPLLPKETAPAVQRVVWNSSNKFQTSSQKWHMQKMQRQQQQQQNQQSQSQQPQSSQGTRYQTRQAVKAVQQKEITQSTSTSTITLVTSTQPISMVTSSGSANTLSSSVNTDLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLEMEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSATATQQETDNEISTETLNKTSQPSSSVQPTPTETASTPKEKEVSSDKSKESVTDPSV
SIO_010081: ZMYND8
subclass of: SO_0000673
so part of: ZMYND8
location: join(1397175..1397188,1407960..1408030,1422272..1422420,1425906..1426124,1427007..1427120,1428400..1428492,1429650..1429737,1430305..1430360,1431516..1431593,1431990..1432105,1433183..1433664,1436034..1436174,1444531..1444683,1445501..1446004,1448198..1448572,1450624..1450814,1451713..1451793,1452373..1452451,1452893..1453132,1453301..1453458,1453825..1453839)
location: region:1397175-1453839:1
so has part: feature:1397175-1397188:1:exon
so has part: feature:1407960-1408030:1:exon
so has part: feature:1422272-1422420:1:exon
so has part: feature:1425906-1426124:1:exon
so has part: feature:1427007-1427120:1:exon
so has part: feature:1428400-1428492:1:exon
so has part: feature:1429650-1429737:1:exon
so has part: feature:1430305-1430360:1:exon
so has part: feature:1431516-1431593:1:exon
so has part: feature:1431990-1432105:1:exon
so has part: feature:1433183-1433664:1:exon
so has part: feature:1436034-1436174:1:exon
so has part: feature:1444531-1444683:1:exon
so has part: feature:1445501-1446004:1:exon
so has part: feature:1448198-1448572:1:exon
so has part: feature:1450624-1450814:1:exon
so has part: feature:1451713-1451793:1:exon
so has part: feature:1452373-1452451:1:exon
so has part: feature:1452893-1453132:1:exon
so has part: feature:1453301-1453458:1:exon
so has part: feature:1453825-1453839:1:exon

XP_032054522.1
type: Protein
SIO_000068: ncbiprotein

position:1453839:1
position: 1453839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1397175-1397188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1407960-1408030:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1422272-1422420:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1425906-1426124:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1427007-1427120:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1428400-1428492:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1429650-1429737:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1430305-1430360:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1431516-1431593:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1431990-1432105:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1433183-1433664:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1436034-1436174:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1444531-1444683:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1445501-1446004:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1448198-1448572:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1450624-1450814:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1451713-1451793:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1452373-1452451:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1452893-1453132:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1453301-1453458:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1453825-1453839:1:exon

ZMYND8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ZMYND8
product: zinc finger MYND-type containing 8, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198629.1
SIO_010081: ZMYND8
subclass of: SO_0000673
so part of: ZMYND8
location: join(1400744..1402109,1407960..1408030,1422272..1422420,1425906..1426124,1427007..1427120,1428400..1428492,1429650..1429737,1430305..1430360,1431516..1431593,1431990..1432105,1433183..1433664,1436034..1436174,1444531..1444683,1445501..1446004,1448198..1448572,1450624..1450814,1451713..1451793,1452373..1452451,1452893..1453132,1453301..1453458,1458159..1458523)
location: region:1400744-1458523:1
so has part: feature:1400744-1402109:1:exon
so has part: feature:1407960-1408030:1:exon
so has part: feature:1422272-1422420:1:exon
so has part: feature:1425906-1426124:1:exon
so has part: feature:1427007-1427120:1:exon
so has part: feature:1428400-1428492:1:exon
so has part: feature:1429650-1429737:1:exon
so has part: feature:1430305-1430360:1:exon
so has part: feature:1431516-1431593:1:exon
so has part: feature:1431990-1432105:1:exon
so has part: feature:1433183-1433664:1:exon
so has part: feature:1436034-1436174:1:exon
so has part: feature:1444531-1444683:1:exon
so has part: feature:1445501-1446004:1:exon
so has part: feature:1448198-1448572:1:exon
so has part: feature:1450624-1450814:1:exon
so has part: feature:1451713-1451793:1:exon
so has part: feature:1452373-1452451:1:exon
so has part: feature:1452893-1453132:1:exon
so has part: feature:1453301-1453458:1:exon
so has part: feature:1458159-1458523:1:exon

position:1400744:1
position: 1400744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1400744-1402109:1:exon

position:1402109:1
position: 1402109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1407960-1408030:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1422272-1422420:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1425906-1426124:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1427007-1427120:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1428400-1428492:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1429650-1429737:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1430305-1430360:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1431516-1431593:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1431990-1432105:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1433183-1433664:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1436034-1436174:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1444531-1444683:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1445501-1446004:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1448198-1448572:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1450624-1450814:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1451713-1451793:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1452373-1452451:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1452893-1453132:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1453301-1453458:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1458159-1458523:1:exon

ZMYND8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: ZMYND8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein kinase C-binding protein 1 isoform X2
translation: MDISTRSKDPGSVERTAQKRKFPSPPHSSNGHSPQDASTSPIKKKKKPGLLNSNNKEQSELRHGPFYYMKQPLTTDPVDVVPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLKLTAEPEGDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLKFALQKMKQPGTEPFQKPVSLDQHPDYAEYIFHPMDLCTLEKNVKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQTAKVIIKICEHEMNEIEVCPECYLAACQKRENWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVDNIRRKFGVFNYAPFRTPYTPNNQYQMLLDPANPTAGTAKTDKQEKIKLNFDMTASPKILMSKPMLSSSTGRRISLTDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFTEKNTASPAPTRTGQAGSLSGSPKPFSPQASTPISAKQERTSTPGSILNLNLDRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEAVYTAVEHSDSEDSEKSDTSDSEYSDEDQKSKNDQEDGEDKEGTRSDKESMSLKKKPKPPAQNEDKEELKSTSPEVEKTDDPVKEKAITDTEKEFSEKGKSLQHPAKEKLKGKDETDSPTVHLGLDSDSESELVIDLGDDHCGREGRKNKKESKEPPPKQDVVGKTPPSSSASTQPLPETPVLTRSAAQTPPAGVTATTSTTSTVSAPSAATGSPVKKQRPLLPKETAPAVQRVVWNSSNKFQTSSQKWHMQKMQRQQQQQQNQQSQSQQPQSSQGTRYQTRQAVKAVQQKEITQSTSTSTITLVTSTQPISMVTSSGSANTLSSSVNTDLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLEMEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSATATQQETDNEISTETLNKTSQPSSSVQPTPTETASTPKEKEVSSDKSKESVTTIPVVVSPSAGTVAMRTGVQYVQTTMPVQVRRV
SIO_010081: ZMYND8
subclass of: SO_0000673
so part of: ZMYND8
location: join(1408006..1408030,1422272..1422420,1425906..1426124,1427007..1427120,1428400..1428492,1429650..1429737,1430305..1430360,1431516..1431593,1431990..1432105,1433183..1433664,1436034..1436174,1444531..1444683,1445501..1446004,1448198..1448572,1450624..1450814,1451713..1451793,1452373..1452451,1452893..1453132,1453301..1453458,1458159..1458260)
location: region:1408006-1458260:1
so has part: feature:1408006-1408030:1:exon
so has part: feature:1422272-1422420:1:exon
so has part: feature:1425906-1426124:1:exon
so has part: feature:1427007-1427120:1:exon
so has part: feature:1428400-1428492:1:exon
so has part: feature:1429650-1429737:1:exon
so has part: feature:1430305-1430360:1:exon
so has part: feature:1431516-1431593:1:exon
so has part: feature:1431990-1432105:1:exon
so has part: feature:1433183-1433664:1:exon
so has part: feature:1436034-1436174:1:exon
so has part: feature:1444531-1444683:1:exon
so has part: feature:1445501-1446004:1:exon
so has part: feature:1448198-1448572:1:exon
so has part: feature:1450624-1450814:1:exon
so has part: feature:1451713-1451793:1:exon
so has part: feature:1452373-1452451:1:exon
so has part: feature:1452893-1453132:1:exon
so has part: feature:1453301-1453458:1:exon
so has part: feature:1458159-1458260:1:exon

XP_032054518.1
type: Protein
SIO_000068: ncbiprotein

position:1408006:1
position: 1408006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1408006-1408030:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1422272-1422420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1425906-1426124:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1427007-1427120:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1428400-1428492:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1429650-1429737:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1430305-1430360:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1431516-1431593:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1431990-1432105:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1433183-1433664:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1436034-1436174:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1444531-1444683:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1445501-1446004:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1448198-1448572:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1450624-1450814:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1451713-1451793:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1452373-1452451:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1452893-1453132:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1453301-1453458:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1458159-1458260:1:exon

ZMYND8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: ZMYND8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein kinase C-binding protein 1 isoform X2
translation: MDISTRSKDPGSVERTAQKRKFPSPPHSSNGHSPQDASTSPIKKKKKPGLLNSNNKEQSELRHGPFYYMKQPLTTDPVDVVPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLKLTAEPEGDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLKFALQKMKQPGTEPFQKPVSLDQHPDYAEYIFHPMDLCTLEKNVKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQTAKVIIKICEHEMNEIEVCPECYLAACQKRENWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVDNIRRKFGVFNYAPFRTPYTPNNQYQMLLDPANPTAGTAKTDKQEKIKLNFDMTASPKILMSKPMLSSSTGRRISLTDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFTEKNTASPAPTRTGQAGSLSGSPKPFSPQASTPISAKQERTSTPGSILNLNLDRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEAVYTAVEHSDSEDSEKSDTSDSEYSDEDQKSKNDQEDGEDKEGTRSDKESMSLKKKPKPPAQNEDKEELKSTSPEVEKTDDPVKEKAITDTEKEFSEKGKSLQHPAKEKLKGKDETDSPTVHLGLDSDSESELVIDLGDDHCGREGRKNKKESKEPPPKQDVVGKTPPSSSASTQPLPETPVLTRSAAQTPPAGVTATTSTTSTVSAPSAATGSPVKKQRPLLPKETAPAVQRVVWNSSNKFQTSSQKWHMQKMQRQQQQQQNQQSQSQQPQSSQGTRYQTRQAVKAVQQKEITQSTSTSTITLVTSTQPISMVTSSGSANTLSSSVNTDLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLEMEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSATATQQETDNEISTETLNKTSQPSSSVQPTPTETASTPKEKEVSSDKSKESVTTIPVVVSPSAGTVAMRTGVQYVQTTMPVQVRRV
SIO_010081: ZMYND8
subclass of: SO_0000673
so part of: ZMYND8
location: join(1408006..1408030,1422272..1422420,1425906..1426124,1427007..1427120,1428400..1428492,1429650..1429737,1430305..1430360,1431516..1431593,1431990..1432105,1433183..1433664,1436034..1436174,1444531..1444683,1445501..1446004,1448198..1448572,1450624..1450814,1451713..1451793,1452373..1452451,1452893..1453132,1453301..1453458,1458159..1458260)
location: region:1408006-1458260:1
so has part: feature:1408006-1408030:1:exon
so has part: feature:1422272-1422420:1:exon
so has part: feature:1425906-1426124:1:exon
so has part: feature:1427007-1427120:1:exon
so has part: feature:1428400-1428492:1:exon
so has part: feature:1429650-1429737:1:exon
so has part: feature:1430305-1430360:1:exon
so has part: feature:1431516-1431593:1:exon
so has part: feature:1431990-1432105:1:exon
so has part: feature:1433183-1433664:1:exon
so has part: feature:1436034-1436174:1:exon
so has part: feature:1444531-1444683:1:exon
so has part: feature:1445501-1446004:1:exon
so has part: feature:1448198-1448572:1:exon
so has part: feature:1450624-1450814:1:exon
so has part: feature:1451713-1451793:1:exon
so has part: feature:1452373-1452451:1:exon
so has part: feature:1452893-1453132:1:exon
so has part: feature:1453301-1453458:1:exon
so has part: feature:1458159-1458260:1:exon

XP_032054519.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1408006-1408030:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1422272-1422420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1425906-1426124:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1427007-1427120:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1428400-1428492:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1429650-1429737:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1430305-1430360:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1431516-1431593:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1431990-1432105:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1433183-1433664:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1436034-1436174:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1444531-1444683:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1445501-1446004:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1448198-1448572:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1450624-1450814:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1451713-1451793:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1452373-1452451:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1452893-1453132:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1453301-1453458:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1458159-1458260:1:exon

ZMYND8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: ZMYND8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein kinase C-binding protein 1 isoform X2
translation: MDISTRSKDPGSVERTAQKRKFPSPPHSSNGHSPQDASTSPIKKKKKPGLLNSNNKEQSELRHGPFYYMKQPLTTDPVDVVPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLKLTAEPEGDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLKFALQKMKQPGTEPFQKPVSLDQHPDYAEYIFHPMDLCTLEKNVKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQTAKVIIKICEHEMNEIEVCPECYLAACQKRENWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVDNIRRKFGVFNYAPFRTPYTPNNQYQMLLDPANPTAGTAKTDKQEKIKLNFDMTASPKILMSKPMLSSSTGRRISLTDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFTEKNTASPAPTRTGQAGSLSGSPKPFSPQASTPISAKQERTSTPGSILNLNLDRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEAVYTAVEHSDSEDSEKSDTSDSEYSDEDQKSKNDQEDGEDKEGTRSDKESMSLKKKPKPPAQNEDKEELKSTSPEVEKTDDPVKEKAITDTEKEFSEKGKSLQHPAKEKLKGKDETDSPTVHLGLDSDSESELVIDLGDDHCGREGRKNKKESKEPPPKQDVVGKTPPSSSASTQPLPETPVLTRSAAQTPPAGVTATTSTTSTVSAPSAATGSPVKKQRPLLPKETAPAVQRVVWNSSNKFQTSSQKWHMQKMQRQQQQQQNQQSQSQQPQSSQGTRYQTRQAVKAVQQKEITQSTSTSTITLVTSTQPISMVTSSGSANTLSSSVNTDLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLEMEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSATATQQETDNEISTETLNKTSQPSSSVQPTPTETASTPKEKEVSSDKSKESVTTIPVVVSPSAGTVAMRTGVQYVQTTMPVQVRRV
SIO_010081: ZMYND8
subclass of: SO_0000673
so part of: ZMYND8
location: join(1408006..1408030,1422272..1422420,1425906..1426124,1427007..1427120,1428400..1428492,1429650..1429737,1430305..1430360,1431516..1431593,1431990..1432105,1433183..1433664,1436034..1436174,1444531..1444683,1445501..1446004,1448198..1448572,1450624..1450814,1451713..1451793,1452373..1452451,1452893..1453132,1453301..1453458,1458159..1458260)
location: region:1408006-1458260:1
so has part: feature:1408006-1408030:1:exon
so has part: feature:1422272-1422420:1:exon
so has part: feature:1425906-1426124:1:exon
so has part: feature:1427007-1427120:1:exon
so has part: feature:1428400-1428492:1:exon
so has part: feature:1429650-1429737:1:exon
so has part: feature:1430305-1430360:1:exon
so has part: feature:1431516-1431593:1:exon
so has part: feature:1431990-1432105:1:exon
so has part: feature:1433183-1433664:1:exon
so has part: feature:1436034-1436174:1:exon
so has part: feature:1444531-1444683:1:exon
so has part: feature:1445501-1446004:1:exon
so has part: feature:1448198-1448572:1:exon
so has part: feature:1450624-1450814:1:exon
so has part: feature:1451713-1451793:1:exon
so has part: feature:1452373-1452451:1:exon
so has part: feature:1452893-1453132:1:exon
so has part: feature:1453301-1453458:1:exon
so has part: feature:1458159-1458260:1:exon

XP_032054520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1408006-1408030:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1422272-1422420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1425906-1426124:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1427007-1427120:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1428400-1428492:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1429650-1429737:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1430305-1430360:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1431516-1431593:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1431990-1432105:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1433183-1433664:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1436034-1436174:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1444531-1444683:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1445501-1446004:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1448198-1448572:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1450624-1450814:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1451713-1451793:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1452373-1452451:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1452893-1453132:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1453301-1453458:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1458159-1458260:1:exon

EYA2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: EYA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1467212..1564448)
location: region:1467212-1564448:-1
so has part: feature:1467212-1564448:-1:exon
subclass of: SO_0000010

116495924
type: Gene
SIO_000068: ncbigene

position:1467212:-1
position: 1467212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1564448:-1
position: 1564448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1467212-1564448:-1:exon

EYA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: EYA2
product: EYA transcriptional coactivator and phosphatase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032198670.1
SIO_010081: EYA2
subclass of: SO_0000673
so part of: EYA2
location: complement(join(1467212..1467785,1471803..1471903,1472708..1472829,1473435..1473549,1474530..1474690,1477072..1477130,1483121..1483210,1496430..1496513,1497007..1497134,1498744..1498921,1500711..1500778,1517623..1517739,1520612..1520754,1521374..1521422,1526047..1526165,1564422..1564448))
location: region:1467212-1564448:-1
so has part: feature:1564422-1564448:-1:exon
so has part: feature:1526047-1526165:-1:exon
so has part: feature:1521374-1521422:-1:exon
so has part: feature:1520612-1520754:-1:exon
so has part: feature:1517623-1517739:-1:exon
so has part: feature:1500711-1500778:-1:exon
so has part: feature:1498744-1498921:-1:exon
so has part: feature:1497007-1497134:-1:exon
so has part: feature:1496430-1496513:-1:exon
so has part: feature:1483121-1483210:-1:exon
so has part: feature:1477072-1477130:-1:exon
so has part: feature:1474530-1474690:-1:exon
so has part: feature:1473435-1473549:-1:exon
so has part: feature:1472708-1472829:-1:exon
so has part: feature:1471803-1471903:-1:exon
so has part: feature:1467212-1467785:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1564422-1564448:-1:exon

position:1564422:-1
position: 1564422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1526047-1526165:-1:exon

position:1526047:-1
position: 1526047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1526165:-1
position: 1526165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1521374-1521422:-1:exon

position:1521374:-1
position: 1521374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1521422:-1
position: 1521422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1520612-1520754:-1:exon

position:1520612:-1
position: 1520612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1520754:-1
position: 1520754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1517623-1517739:-1:exon

position:1517623:-1
position: 1517623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1517739:-1
position: 1517739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1500711-1500778:-1:exon

position:1500711:-1
position: 1500711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1500778:-1
position: 1500778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1498744-1498921:-1:exon

position:1498744:-1
position: 1498744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1498921:-1
position: 1498921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1497007-1497134:-1:exon

position:1497007:-1
position: 1497007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1497134:-1
position: 1497134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1496430-1496513:-1:exon

position:1496430:-1
position: 1496430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1496513:-1
position: 1496513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1483121-1483210:-1:exon

position:1483121:-1
position: 1483121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1483210:-1
position: 1483210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1477072-1477130:-1:exon

position:1477072:-1
position: 1477072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1477130:-1
position: 1477130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1474530-1474690:-1:exon

position:1474530:-1
position: 1474530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1474690:-1
position: 1474690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1473435-1473549:-1:exon

position:1473435:-1
position: 1473435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1473549:-1
position: 1473549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1472708-1472829:-1:exon

position:1472708:-1
position: 1472708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1472829:-1
position: 1472829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1471803-1471903:-1:exon

position:1471803:-1
position: 1471803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1471903:-1
position: 1471903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1467212-1467785:-1:exon

position:1467785:-1
position: 1467785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EYA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: EYA2
product: EYA transcriptional coactivator and phosphatase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032198669.1
SIO_010081: EYA2
subclass of: SO_0000673
so part of: EYA2
location: complement(join(1467212..1467785,1471803..1471903,1472708..1472829,1473435..1473549,1474530..1474690,1477072..1477130,1483121..1483210,1496430..1496513,1497007..1497134,1498744..1498921,1500711..1500778,1517623..1517739,1520612..1520754,1521374..1521422,1526047..1526165,1539431..1539484))
location: region:1467212-1539484:-1
so has part: feature:1539431-1539484:-1:exon
so has part: feature:1526047-1526165:-1:exon
so has part: feature:1521374-1521422:-1:exon
so has part: feature:1520612-1520754:-1:exon
so has part: feature:1517623-1517739:-1:exon
so has part: feature:1500711-1500778:-1:exon
so has part: feature:1498744-1498921:-1:exon
so has part: feature:1497007-1497134:-1:exon
so has part: feature:1496430-1496513:-1:exon
so has part: feature:1483121-1483210:-1:exon
so has part: feature:1477072-1477130:-1:exon
so has part: feature:1474530-1474690:-1:exon
so has part: feature:1473435-1473549:-1:exon
so has part: feature:1472708-1472829:-1:exon
so has part: feature:1471803-1471903:-1:exon
so has part: feature:1467212-1467785:-1:exon

position:1539484:-1
position: 1539484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1539431-1539484:-1:exon

position:1539431:-1
position: 1539431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1526047-1526165:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1521374-1521422:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1520612-1520754:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1517623-1517739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1500711-1500778:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1498744-1498921:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1497007-1497134:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1496430-1496513:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1483121-1483210:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1477072-1477130:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1474530-1474690:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1473435-1473549:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1472708-1472829:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1471803-1471903:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1467212-1467785:-1:exon

EYA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: EYA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eyes absent homolog 2
translation: MLDLVISPSLTVNRECPDRLKLNLSNIYATAPDDIEGNSKAAPRCPLHLYSTKHYPHIVTVSSFPTMATYGQTQYSAGIQQAAAYTAYPAPGQPYGIPSYSIKTEDSLSHSPGQSGFLSYGSSFSTPTAGQAPYTYQMHGTTGIYQGANGLTNTAGFSAVHQEYSSYPSFPQSQYSQYYSSSYNSPYMSTNSISPSAIPTSTYSLQESSHNITSQSTESLSGEYATTPAKDIETDRHHRGSDGKVRARSKRSNDPSPTADSEIERVFVWDLDETIIIFHSLLTGTFASRYGKDTTTSVRIGLMMEEMIFNLADTHLFFNDLEDCDQIHIDDVSSDDNGQDLSTYNFSADGFHSSTASANLCLGSGVHGGVDWMRKLAFRYRRVKEMYNTYKNNVGGLIGAPKRETWLQLRAELEALTDLWLTHALKALNLIHSRPNCVNVLVTTTQLIPALAKVLLYGLGTVFPIENIYSATKTGKESCFERIMQRFGRKAVYIVIGDGVEEEQGAKKHNMPFWRISCHADLEALRHALELEYL
SIO_010081: EYA2
subclass of: SO_0000673
so part of: EYA2
location: complement(join(1467705..1467785,1471803..1471903,1472708..1472829,1473435..1473549,1474530..1474690,1477072..1477130,1483121..1483210,1496430..1496513,1497007..1497134,1498744..1498921,1500711..1500778,1517623..1517739,1520612..1520754,1521374..1521422,1526047..1526155))
location: region:1467705-1526155:-1
so has part: feature:1526047-1526155:-1:exon
so has part: feature:1521374-1521422:-1:exon
so has part: feature:1520612-1520754:-1:exon
so has part: feature:1517623-1517739:-1:exon
so has part: feature:1500711-1500778:-1:exon
so has part: feature:1498744-1498921:-1:exon
so has part: feature:1497007-1497134:-1:exon
so has part: feature:1496430-1496513:-1:exon
so has part: feature:1483121-1483210:-1:exon
so has part: feature:1477072-1477130:-1:exon
so has part: feature:1474530-1474690:-1:exon
so has part: feature:1473435-1473549:-1:exon
so has part: feature:1472708-1472829:-1:exon
so has part: feature:1471803-1471903:-1:exon
so has part: feature:1467705-1467785:-1:exon

XP_032054560.1
type: Protein
SIO_000068: ncbiprotein

position:1467705:-1
position: 1467705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1526155:-1
position: 1526155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1526047-1526155:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1521374-1521422:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1520612-1520754:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1517623-1517739:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1500711-1500778:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1498744-1498921:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1497007-1497134:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1496430-1496513:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1483121-1483210:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1477072-1477130:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1474530-1474690:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1473435-1473549:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1472708-1472829:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1471803-1471903:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1467705-1467785:-1:exon

EYA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: EYA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eyes absent homolog 2
translation: MLDLVISPSLTVNRECPDRLKLNLSNIYATAPDDIEGNSKAAPRCPLHLYSTKHYPHIVTVSSFPTMATYGQTQYSAGIQQAAAYTAYPAPGQPYGIPSYSIKTEDSLSHSPGQSGFLSYGSSFSTPTAGQAPYTYQMHGTTGIYQGANGLTNTAGFSAVHQEYSSYPSFPQSQYSQYYSSSYNSPYMSTNSISPSAIPTSTYSLQESSHNITSQSTESLSGEYATTPAKDIETDRHHRGSDGKVRARSKRSNDPSPTADSEIERVFVWDLDETIIIFHSLLTGTFASRYGKDTTTSVRIGLMMEEMIFNLADTHLFFNDLEDCDQIHIDDVSSDDNGQDLSTYNFSADGFHSSTASANLCLGSGVHGGVDWMRKLAFRYRRVKEMYNTYKNNVGGLIGAPKRETWLQLRAELEALTDLWLTHALKALNLIHSRPNCVNVLVTTTQLIPALAKVLLYGLGTVFPIENIYSATKTGKESCFERIMQRFGRKAVYIVIGDGVEEEQGAKKHNMPFWRISCHADLEALRHALELEYL
SIO_010081: EYA2
subclass of: SO_0000673
so part of: EYA2
location: complement(join(1467705..1467785,1471803..1471903,1472708..1472829,1473435..1473549,1474530..1474690,1477072..1477130,1483121..1483210,1496430..1496513,1497007..1497134,1498744..1498921,1500711..1500778,1517623..1517739,1520612..1520754,1521374..1521422,1526047..1526155))
location: region:1467705-1526155:-1
so has part: feature:1526047-1526155:-1:exon
so has part: feature:1521374-1521422:-1:exon
so has part: feature:1520612-1520754:-1:exon
so has part: feature:1517623-1517739:-1:exon
so has part: feature:1500711-1500778:-1:exon
so has part: feature:1498744-1498921:-1:exon
so has part: feature:1497007-1497134:-1:exon
so has part: feature:1496430-1496513:-1:exon
so has part: feature:1483121-1483210:-1:exon
so has part: feature:1477072-1477130:-1:exon
so has part: feature:1474530-1474690:-1:exon
so has part: feature:1473435-1473549:-1:exon
so has part: feature:1472708-1472829:-1:exon
so has part: feature:1471803-1471903:-1:exon
so has part: feature:1467705-1467785:-1:exon

XP_032054561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1526047-1526155:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1521374-1521422:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1520612-1520754:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1517623-1517739:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1500711-1500778:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1498744-1498921:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1497007-1497134:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1496430-1496513:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1483121-1483210:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1477072-1477130:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1474530-1474690:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1473435-1473549:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1472708-1472829:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1471803-1471903:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1467705-1467785:-1:exon

SLC2A10
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: SLC2A10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1651020..1655838)
location: region:1651020-1655838:-1
so has part: feature:1651020-1655838:-1:exon
subclass of: SO_0000010

116495784
type: Gene
SIO_000068: ncbigene

position:1651020:-1
position: 1651020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1655838:-1
position: 1655838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1651020-1655838:-1:exon

SLC2A10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SLC2A10
product: solute carrier family 2 member 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032198495.1
SIO_010081: SLC2A10
subclass of: SO_0000673
so part of: SLC2A10
location: complement(join(1651020..1651369,1651993..1652128,1652686..1652808,1653838..1655217,1655772..1655838))
location: region:1651020-1655838:-1
so has part: feature:1655772-1655838:-1:exon
so has part: feature:1653838-1655217:-1:exon
so has part: feature:1652686-1652808:-1:exon
so has part: feature:1651993-1652128:-1:exon
so has part: feature:1651020-1651369:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1655772-1655838:-1:exon

position:1655772:-1
position: 1655772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1653838-1655217:-1:exon

position:1653838:-1
position: 1653838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1655217:-1
position: 1655217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1652686-1652808:-1:exon

position:1652686:-1
position: 1652686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1652808:-1
position: 1652808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1651993-1652128:-1:exon

position:1651993:-1
position: 1651993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1652128:-1
position: 1652128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1651020-1651369:-1:exon

position:1651369:-1
position: 1651369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC2A10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SLC2A10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 2, facilitated glucose transporter member 10
translation: MQSAGRQHLFHPGIVRSLKKESGRALLVLLLSATVSLLGGLIFGYELGIISGALLQLQTDFHLGCFRQEVLVSSLLIGALLASLVGGILIDRHGRRRAILVSNLVLLFGSLILTLARSFIGLVIGRMTVGFAISVSSMACCIYVSEMVAAHQRGLLVSLYEAGITVGILLSYALNYVFADVDEGWRYMFGLAIAPTAMQFLSILFLPVNPVKLNSWDSDCQKGLIQLQTAEDREAAKQESYKEKHYSFLDLFRTRDNMRRRTLVGLGLVLFQQFTGQPNVLGYASKIFHSVGFQSNSSAILASVGLGAIKVVATLVAMAFADKAGRRVLLIAGCVVMAISVTTIGLTSCIAPLAMARDCTAAADPNASHSLSQHPLTPLSSQPTGSHIPPALGEGSRQGGADSAAAKSLTKAFASARSRAAVTDSPHTQKMGLASQSKTETGEESSGPPFGGAPPTEHMVLNWITLLSMMAFVSAFSIGFGPMTWLVLSEIYPAGIRGRAFAFCNSFNWAANLLISLSFLDLIDAIGFSWMFLLYGLMGVMAVIFIYLFVPETKGQSLEEIDQQFSRKRLWEGSGCKRARGASCAHGQYQRVEHTSST
SIO_010081: SLC2A10
subclass of: SO_0000673
so part of: SLC2A10
location: complement(join(1651279..1651369,1651993..1652128,1652686..1652808,1653838..1655217,1655772..1655838))
location: region:1651279-1655838:-1
so has part: feature:1655772-1655838:-1:exon
so has part: feature:1653838-1655217:-1:exon
so has part: feature:1652686-1652808:-1:exon
so has part: feature:1651993-1652128:-1:exon
so has part: feature:1651279-1651369:-1:exon

XP_032054386.1
type: Protein
SIO_000068: ncbiprotein

position:1651279:-1
position: 1651279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1655772-1655838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1653838-1655217:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1652686-1652808:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1651993-1652128:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1651279-1651369:-1:exon

TP53RK
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TP53RK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1663941..1665122
location: region:1663941-1665122:1
so has part: feature:1663941-1665122:1:exon
subclass of: SO_0000010

116495785
type: Gene
SIO_000068: ncbigene

position:1663941:1
position: 1663941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1665122:1
position: 1665122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1663941-1665122:1:exon

TP53RK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: TP53RK
product: TP53 regulating kinase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198496.1
SIO_010081: TP53RK
subclass of: SO_0000673
so part of: TP53RK
location: join(1663941..1664292,1664450..1665122)
location: region:1663941-1665122:1
so has part: feature:1663941-1664292:1:exon
so has part: feature:1664450-1665122:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1663941-1664292:1:exon

position:1664292:1
position: 1664292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1664450-1665122:1:exon

position:1664450:1
position: 1664450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TP53RK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: TP53RK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EKC/KEOPS complex subunit TP53RK
translation: MAEHSGAARMRGEVSAPKMAAAGSAEATDGVATAVGNSAEAGAAAPGPAVSEAPPLPGLQLVQQGAEARVYRGRFLGRAAVVKLRFPKRYRHPALEERLSRRRTAQEARSLLRCRRAGIPAPVVYFVDYVTNCIYLEDIVGSITVQDHINSVQDSGNDTSSLLNLAEKMGELLARMHDEDLIHGDLTTSNVLLRPPAEKLDLVLIDFGLSFISGLPEDKGVDLYVLEKAFLSTHPNTETLFKALLKTYGATSKKSGPVMKRLDEVRLRGRKRSMVG
SIO_010081: TP53RK
subclass of: SO_0000673
so part of: TP53RK
location: join(1663941..1664292,1664450..1664928)
location: region:1663941-1664928:1
so has part: feature:1663941-1664292:1:exon
so has part: feature:1664450-1664928:1:exon

XP_032054387.1
type: Protein
SIO_000068: ncbiprotein

position:1664928:1
position: 1664928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1663941-1664292:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1664450-1664928:1:exon

SLC13A3
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: SLC13A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1671589..1698294
location: region:1671589-1698294:1
so has part: feature:1671589-1698294:1:exon
subclass of: SO_0000010

116495712
type: Gene
SIO_000068: ncbigene

position:1671589:1
position: 1671589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1698294:1
position: 1698294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1671589-1698294:1:exon

SLC13A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SLC13A3
product: solute carrier family 13 member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198383.1
SIO_010081: SLC13A3
subclass of: SO_0000673
so part of: SLC13A3
location: join(1671589..1671699,1681434..1681699,1681872..1682035,1685721..1685787,1686480..1686665,1687535..1687660,1690960..1691055,1692902..1693006,1694061..1694158,1695040..1695152,1695478..1695639,1695953..1696090,1696639..1698294)
location: region:1671589-1698294:1
so has part: feature:1671589-1671699:1:exon
so has part: feature:1681434-1681699:1:exon
so has part: feature:1681872-1682035:1:exon
so has part: feature:1685721-1685787:1:exon
so has part: feature:1686480-1686665:1:exon
so has part: feature:1687535-1687660:1:exon
so has part: feature:1690960-1691055:1:exon
so has part: feature:1692902-1693006:1:exon
so has part: feature:1694061-1694158:1:exon
so has part: feature:1695040-1695152:1:exon
so has part: feature:1695478-1695639:1:exon
so has part: feature:1695953-1696090:1:exon
so has part: feature:1696639-1698294:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1671589-1671699:1:exon

position:1671699:1
position: 1671699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1681434-1681699:1:exon

position:1681434:1
position: 1681434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1681699:1
position: 1681699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1681872-1682035:1:exon

position:1681872:1
position: 1681872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1682035:1
position: 1682035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1685721-1685787:1:exon

position:1685721:1
position: 1685721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1685787:1
position: 1685787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1686480-1686665:1:exon

position:1686480:1
position: 1686480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1686665:1
position: 1686665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1687535-1687660:1:exon

position:1687535:1
position: 1687535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1687660:1
position: 1687660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1690960-1691055:1:exon

position:1690960:1
position: 1690960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1691055:1
position: 1691055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1692902-1693006:1:exon

position:1692902:1
position: 1692902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1693006:1
position: 1693006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1694061-1694158:1:exon

position:1694061:1
position: 1694061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1694158:1
position: 1694158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1695040-1695152:1:exon

position:1695040:1
position: 1695040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1695152:1
position: 1695152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1695478-1695639:1:exon

position:1695478:1
position: 1695478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1695639:1
position: 1695639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1695953-1696090:1:exon

position:1695953:1
position: 1695953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1696090:1
position: 1696090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1696639-1698294:1:exon

position:1696639:1
position: 1696639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC13A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SLC13A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 13 member 3
translation: MAALGALVKKVWSVRRVLVLLCAPLALVPVLLSLPPKEGRCLYVILLMALYWCTEALPLAVTALLPIVLFPFLGILPSNKVCPQYFLDTNFLFLSGLIMASAIEEWNLHRRIALRVLMLVGVQPARLILGMMLTTSFLSMWLSNTASTAMMLPIANAILKSLFGEKDTSKNMNREHEEIQASLQQNKLYTVPTEMQFLASTEDKDLTEEKEVASDALSDLKKEEEYKTNIWKGFLISIPYAASIGGTATLTGTAPNLILLGQLKSYFPECDVVNFGSWFMFAFPLMLIFLLVGWLWISILYGGINLRGWRTKKSNIRVDAEVRAREVIKEDYQKLGPTKFAEQAIFFFFCMFAIMLFSRDPKFIPGWASLFAPGFISDAVTGITIVIILFFFPSQKPSFRWWFDFKAPNTEMQPLLTWRKAQETVPWNIILLLGGGFAMAKGCEESGLSVWIGGRLHPLEGVPPPVAVILITIVIALFTEFASNTATIIIFLPVLAELAIRLKVNPLYLMIPGTIGCSYAFMLPVSTPPNSIAFSSGHLMVKDMARTGLLMNLMGVLLLSLAMNTWAKSIFQLGTFPAWANIHAENATSLLPAVENVTFSALNKI
SIO_010081: SLC13A3
subclass of: SO_0000673
so part of: SLC13A3
location: join(1671589..1671699,1681434..1681699,1681872..1682035,1685721..1685787,1686480..1686665,1687535..1687660,1690960..1691055,1692902..1693006,1694061..1694158,1695040..1695152,1695478..1695639,1695953..1696090,1696639..1696824)
location: region:1671589-1696824:1
so has part: feature:1671589-1671699:1:exon
so has part: feature:1681434-1681699:1:exon
so has part: feature:1681872-1682035:1:exon
so has part: feature:1685721-1685787:1:exon
so has part: feature:1686480-1686665:1:exon
so has part: feature:1687535-1687660:1:exon
so has part: feature:1690960-1691055:1:exon
so has part: feature:1692902-1693006:1:exon
so has part: feature:1694061-1694158:1:exon
so has part: feature:1695040-1695152:1:exon
so has part: feature:1695478-1695639:1:exon
so has part: feature:1695953-1696090:1:exon
so has part: feature:1696639-1696824:1:exon

XP_032054274.1
type: Protein
SIO_000068: ncbiprotein

position:1696824:1
position: 1696824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1671589-1671699:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1681434-1681699:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1681872-1682035:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1685721-1685787:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1686480-1686665:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1687535-1687660:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1690960-1691055:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1692902-1693006:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1694061-1694158:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1695040-1695152:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1695478-1695639:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1695953-1696090:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1696639-1696824:1:exon

OCSTAMP
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: OCSTAMP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1701408..1704654
location: region:1701408-1704654:1
so has part: feature:1701408-1704654:1:exon
subclass of: SO_0000010

116495786
type: Gene
SIO_000068: ncbigene

position:1701408:1
position: 1701408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1704654:1
position: 1704654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1701408-1704654:1:exon

OCSTAMP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: OCSTAMP
product: osteoclast stimulatory transmembrane protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032198497.1
SIO_010081: OCSTAMP
subclass of: SO_0000673
so part of: OCSTAMP
location: join(1701408..1701451,1702341..1703396,1704238..1704654)
location: region:1701408-1704654:1
so has part: feature:1701408-1701451:1:exon
so has part: feature:1702341-1703396:1:exon
so has part: feature:1704238-1704654:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1701408-1701451:1:exon

position:1701451:1
position: 1701451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1702341-1703396:1:exon

position:1702341:1
position: 1702341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1703396:1
position: 1703396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1704238-1704654:1:exon

position:1704238:1
position: 1704238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OCSTAMP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: OCSTAMP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: osteoclast stimulatory transmembrane protein
translation: MESLRAGLGHISAAWLSVCAYCEDFLFPRVSRMAADLWCIYSKPVPADGRELRALFLQCSCLAAVVGGLFYNWLFASLEYSWHLAVAMAVSFSLLLLLTLFLVHPARCVFSMIMPTLGTKQGRKLLLSTCIMIVAVNVTPNIVSNIKTILQVIKCICKNSSESLLNSTALLGTASWEFGEEIQAASNSINIWRPMNGHFRFSLLHNSSLINQQMHLAGEKVRRDFLAVEELVKDSVRVGNKLVAGFSMLYLCFESAWYLKNYLTNLRFDNFYITKKLEHLAVDRKTPHLLGGWSKNLIQPTGLKLSREEVLLCLVQALRLAVALTLMLVVVAMDHVTFSMADTAVRKVAHLSVVPITLSIKYSVSASLFQLPDKGSTLRDFEKSYHHYLTFSSARCSISPPLPPNPSVLFVMVLLFCIIYATVFLETYARRLCRKIAASFFESQEEERALYLYSKLSRKYAEEQSCPKN
SIO_010081: OCSTAMP
subclass of: SO_0000673
so part of: OCSTAMP
location: join(1701408..1701451,1702341..1703396,1704238..1704547)
location: region:1701408-1704547:1
so has part: feature:1701408-1701451:1:exon
so has part: feature:1702341-1703396:1:exon
so has part: feature:1704238-1704547:1:exon

XP_032054388.1
type: Protein
SIO_000068: ncbiprotein

position:1704547:1
position: 1704547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1701408-1701451:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1702341-1703396:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1704238-1704547:1:exon

LOC116495787
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116495787
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1713222..1721053
location: region:1713222-1721053:1
so has part: feature:1713222-1721053:1:exon
subclass of: SO_0000010

116495787
type: Gene
SIO_000068: ncbigene

position:1713222:1
position: 1713222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1721053:1
position: 1721053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1713222-1721053:1:exon

LOC116495787
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116495787
product: thyrotropin-releasing hormone receptor-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_032198499.1
SIO_010081: LOC116495787
subclass of: SO_0000673
so part of: LOC116495787
location: join(1713222..1714007,1720676..1721053)
location: region:1713222-1721053:1
so has part: feature:1713222-1714007:1:exon
so has part: feature:1720676-1721053:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1713222-1714007:1:exon

position:1714007:1
position: 1714007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1720676-1721053:1:exon

position:1720676:1
position: 1720676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116495787
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116495787
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyrotropin-releasing hormone receptor-like
translation: MENGSASPGASPAGSGNQTLGRMPRQPLELQVVTILLVLLICGVGIAGNVMVVLVVLRTKHMVTPTNCYLVSLAVADLIVLLAAGLPNISDVVASWVYGYAGCLCITYLQYLGINISAWSITAFTVERYIAICHAIKAQLLCTVSRAKRIVSSLWLFTSLYCLMWFFLVDTTQVTFLDGAQVTCGYRVSRSLYMPIYFLDFAVFYVIPLGLATVLYGLIARILFMSPLPATPQHPCLGSTHQGGSLKLSCRGNRGALSSRRQVTKMLAVVVVLFALLWMPYRTLVVVNSFMDPPYLNIWFLLFCRTCIYLNSAINPIIYNLMSQKFRAAFRKLWECEQKSTENPTLHSAPVYYSITKDCSHGSSDLLTEQEELNSLPAPARKSRPAK
SIO_010081: LOC116495787
subclass of: SO_0000673
so part of: LOC116495787
location: join(1713222..1714007,1720676..1721053)
location: region:1713222-1721053:1
so has part: feature:1713222-1714007:1:exon
so has part: feature:1720676-1721053:1:exon

XP_032054390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1713222-1714007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1720676-1721053:1:exon

JPH2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: JPH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1731504..1758574)
location: region:1731504-1758574:-1
so has part: feature:1731504-1758574:-1:exon
subclass of: SO_0000010

116495788
type: Gene
SIO_000068: ncbigene

position:1731504:-1
position: 1731504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1758574:-1
position: 1758574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1731504-1758574:-1:exon

JPH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: JPH2
product: junctophilin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032198500.1
SIO_010081: JPH2
subclass of: SO_0000673
so part of: JPH2
location: complement(join(1731504..1732038,1733042..1733139,1734436..1735220,1738748..1738866,1750493..1751276,1758196..1758574))
location: region:1731504-1758574:-1
so has part: feature:1758196-1758574:-1:exon
so has part: feature:1750493-1751276:-1:exon
so has part: feature:1738748-1738866:-1:exon
so has part: feature:1734436-1735220:-1:exon
so has part: feature:1733042-1733139:-1:exon
so has part: feature:1731504-1732038:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1758196-1758574:-1:exon

position:1758196:-1
position: 1758196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1750493-1751276:-1:exon

position:1750493:-1
position: 1750493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1751276:-1
position: 1751276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1738748-1738866:-1:exon

position:1738748:-1
position: 1738748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1738866:-1
position: 1738866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1734436-1735220:-1:exon

position:1734436:-1
position: 1734436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1735220:-1
position: 1735220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1733042-1733139:-1:exon

position:1733042:-1
position: 1733042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1733139:-1
position: 1733139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1731504-1732038:-1:exon

position:1732038:-1
position: 1732038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

JPH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: JPH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: junctophilin-2
translation: MSGGRFDFDDGGAYCGGWEGGKAHGHGICTGPKGQGEYSGSWNYGFEVVGIYTWPSGNTYEGYWSQGKRHGLGIETKGRWVYRGEWTHGFKGRYGTRQSMSSGAKYEGTWNNGLQDGYGTETYADGGTYQGQFTNGMRHGYGVRQSVPYGMASVVRSPLRTSLSSLRSEHSNGTLPQQDSPAAHPESLPVSPTITRGGFALSLYADTEAGKPKKGGLFRRGSLLGKLKKSESKSSLASQKSRVSFLKSESGISSAASDATSTVSLGEGAEGEEYPPFESDIDATTTETYMGEWKNDKRSGFGVSERSSGLKYEGEWLDNLRHGYGCTTLPDGKKEEGKYRHNVLVKGMKKRVIPLKSAKIRQKVDRSVEGAQRAAAIARQKSEIAASRTAHAKAKAEGSEQAAQAANNESGIARMMARELSPDFYQPGPEYQKRRLLQEIIENTEHTINMEEAAPPPRPEGAPPPPTPPESPQLHEEDAAPRRRHSPAPSPAATPPEAKRAKAAARQDGGLRPGSWGEAGGGAADGEARPASRGAGRPAEQMEIGPLQRMAREPDVELFKGYHSYAVRTSSVSPTTDYEEEPFPEHHRPPSPESRGEPQRHGGTPVPPREPEEKPALRAEAKAEQPRPKEAQPRPKEAKQRPSPERRVAGRNEPADRKTEGRAPGRTEHKAGAKRSPAPLPPDAEECDEGPNTIVICMVILLNIGLAILFVHFLT
SIO_010081: JPH2
subclass of: SO_0000673
so part of: JPH2
location: complement(join(1733059..1733139,1734436..1735220,1738748..1738866,1750493..1751276,1758196..1758574))
location: region:1733059-1758574:-1
so has part: feature:1758196-1758574:-1:exon
so has part: feature:1750493-1751276:-1:exon
so has part: feature:1738748-1738866:-1:exon
so has part: feature:1734436-1735220:-1:exon
so has part: feature:1733059-1733139:-1:exon

XP_032054391.1
type: Protein
SIO_000068: ncbiprotein

position:1733059:-1
position: 1733059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1758196-1758574:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1750493-1751276:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1738748-1738866:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1734436-1735220:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1733059-1733139:-1:exon

OSER1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: OSER1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1761196..1767783)
location: region:1761196-1767783:-1
so has part: feature:1761196-1767783:-1:exon
subclass of: SO_0000010

116495533
type: Gene
SIO_000068: ncbigene

position:1761196:-1
position: 1761196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1767783:-1
position: 1767783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1761196-1767783:-1:exon

OSER1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: OSER1
product: oxidative stress responsive serine rich 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198060.1
SIO_010081: OSER1
subclass of: SO_0000673
so part of: OSER1
location: complement(join(1761196..1762007,1762723..1762836,1764684..1764800,1767718..1767783))
location: region:1761196-1767783:-1
so has part: feature:1767718-1767783:-1:exon
so has part: feature:1764684-1764800:-1:exon
so has part: feature:1762723-1762836:-1:exon
so has part: feature:1761196-1762007:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1767718-1767783:-1:exon

position:1767718:-1
position: 1767718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1764684-1764800:-1:exon

position:1764684:-1
position: 1764684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1764800:-1
position: 1764800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1762723-1762836:-1:exon

position:1762723:-1
position: 1762723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1762836:-1
position: 1762836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1761196-1762007:-1:exon

position:1762007:-1
position: 1762007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OSER1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: OSER1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxidative stress-responsive serine-rich protein 1
translation: MKTEAKDGEEESLQTAFKKLRVDAAGSTASLPVGEGTSPRAVVRTAADENKPKNVCTSKETWHGPVKKPSRGVVRTQRRRRSKSPILHTPKFVHCSTKSHSTCSQVVHKSQIDAPDDGTGFGMPIPKEACAHERCCIAPDVGQKGDNVDSSGASVLRSTSENKQENSPTAMSLESKAGPETTQLSDFQSVSKLNKSKPCACADKACQCKRWQDMEVYKFSGLQNAFPLAPDRKTVAEDHSQPLPSRTPSSSPRSCSEQARAFVDDVTIEDLSGYMEYYLYIPKKMSHMAEMMYT
SIO_010081: OSER1
subclass of: SO_0000673
so part of: OSER1
location: complement(join(1761314..1762007,1762723..1762836,1764684..1764760))
location: region:1761314-1764760:-1
so has part: feature:1764684-1764760:-1:exon
so has part: feature:1762723-1762836:-1:exon
so has part: feature:1761314-1762007:-1:exon

XP_032053951.1
type: Protein
SIO_000068: ncbiprotein

position:1761314:-1
position: 1761314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1764760:-1
position: 1764760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1764684-1764760:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1762723-1762836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1761314-1762007:-1:exon

LOC116495806
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116495806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1767918..1772434
location: region:1767918-1772434:1
so has part: feature:1767918-1772434:1:exon
subclass of: SO_0000010

116495806
type: Gene
SIO_000068: ncbigene

position:1767918:1
position: 1767918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1772434:1
position: 1772434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1767918-1772434:1:exon

LOC116495806
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116495806
product: oxidative stress-responsive serine-rich protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032198519.1
SIO_010081: LOC116495806
subclass of: SO_0000673
so part of: LOC116495806
location: join(1767918..1767952,1768240..1768336,1770012..1770122,1770812..1772434)
location: region:1767918-1772434:1
so has part: feature:1767918-1767952:1:exon
so has part: feature:1768240-1768336:1:exon
so has part: feature:1770012-1770122:1:exon
so has part: feature:1770812-1772434:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1767918-1767952:1:exon

position:1767952:1
position: 1767952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1768240-1768336:1:exon

position:1768240:1
position: 1768240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1768336:1
position: 1768336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1770012-1770122:1:exon

position:1770012:1
position: 1770012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1770122:1
position: 1770122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1770812-1772434:1:exon

position:1770812:1
position: 1770812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116495806
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116495806
product: oxidative stress-responsive serine-rich protein 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198518.1
SIO_010081: LOC116495806
subclass of: SO_0000673
so part of: LOC116495806
location: join(1767926..1768062,1768240..1768336,1770012..1770122,1770812..1772434)
location: region:1767926-1772434:1
so has part: feature:1767926-1768062:1:exon
so has part: feature:1768240-1768336:1:exon
so has part: feature:1770012-1770122:1:exon
so has part: feature:1770812-1772434:1:exon

position:1767926:1
position: 1767926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1767926-1768062:1:exon

position:1768062:1
position: 1768062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1768240-1768336:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1770012-1770122:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1770812-1772434:1:exon

LOC116495806
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116495806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxidative stress-responsive serine-rich protein 1-like
translation: MAAKEEEEESLQLAFKKLRVDAAGCIAALSVGDGTILRTPIRTAVDGAKQQSVCSKEAWHGCVRKPSRGSARVPRRRRSKSPVLHPPKFTYCNVKASGQLKHKTQSDVSKSNVTPDVFVPAEHGTKDRHDSHFEASDDRRARTEPLEASTTQEPLGKSRESCLGLSSSFETSLHSSQTSDFQSLSMLSNGKQCPCTDKKCQCRQWRSMEVYSFSGLRSVLSECEKAVLGARARSRQNRSPCGAASSGSPRSCSEQARAFVDDVTIEDLSGYMEYYLYIPKKMSHMAEMMYT
SIO_010081: LOC116495806
subclass of: SO_0000673
so part of: LOC116495806
location: join(1768266..1768336,1770012..1770122,1770812..1771505)
location: region:1768266-1771505:1
so has part: feature:1768266-1768336:1:exon
so has part: feature:1770012-1770122:1:exon
so has part: feature:1770812-1771505:1:exon

XP_032054409.1
type: Protein
SIO_000068: ncbiprotein

position:1768266:1
position: 1768266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1771505:1
position: 1771505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1768266-1768336:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1770012-1770122:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1770812-1771505:1:exon

LOC116495806
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116495806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxidative stress-responsive serine-rich protein 1-like
translation: MAAKEEEEESLQLAFKKLRVDAAGCIAALSVGDGTILRTPIRTAVDGAKQQSVCSKEAWHGCVRKPSRGSARVPRRRRSKSPVLHPPKFTYCNVKASGQLKHKTQSDVSKSNVTPDVFVPAEHGTKDRHDSHFEASDDRRARTEPLEASTTQEPLGKSRESCLGLSSSFETSLHSSQTSDFQSLSMLSNGKQCPCTDKKCQCRQWRSMEVYSFSGLRSVLSECEKAVLGARARSRQNRSPCGAASSGSPRSCSEQARAFVDDVTIEDLSGYMEYYLYIPKKMSHMAEMMYT
SIO_010081: LOC116495806
subclass of: SO_0000673
so part of: LOC116495806
location: join(1768266..1768336,1770012..1770122,1770812..1771505)
location: region:1768266-1771505:1
so has part: feature:1768266-1768336:1:exon
so has part: feature:1770012-1770122:1:exon
so has part: feature:1770812-1771505:1:exon

XP_032054410.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1768266-1768336:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1770012-1770122:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1770812-1771505:1:exon

GDAP1L1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: GDAP1L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1775024..1787486
location: region:1775024-1787486:1
so has part: feature:1775024-1787486:1:exon
subclass of: SO_0000010

116495713
type: Gene
SIO_000068: ncbigene

position:1775024:1
position: 1775024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1787486:1
position: 1787486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1775024-1787486:1:exon

GDAP1L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: GDAP1L1
product: ganglioside induced differentiation associated protein 1 like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198384.1
SIO_010081: GDAP1L1
subclass of: SO_0000673
so part of: GDAP1L1
location: join(1775024..1775555,1777840..1778032,1780709..1780882,1783196..1783293,1783385..1783499,1786119..1787486)
location: region:1775024-1787486:1
so has part: feature:1775024-1775555:1:exon
so has part: feature:1777840-1778032:1:exon
so has part: feature:1780709-1780882:1:exon
so has part: feature:1783196-1783293:1:exon
so has part: feature:1783385-1783499:1:exon
so has part: feature:1786119-1787486:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1775024-1775555:1:exon

position:1775555:1
position: 1775555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1777840-1778032:1:exon

position:1777840:1
position: 1777840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1778032:1
position: 1778032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1780709-1780882:1:exon

position:1780709:1
position: 1780709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1780882:1
position: 1780882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1783196-1783293:1:exon

position:1783196:1
position: 1783196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1783293:1
position: 1783293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1783385-1783499:1:exon

position:1783385:1
position: 1783385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1783499:1
position: 1783499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1786119-1787486:1:exon

position:1786119:1
position: 1786119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GDAP1L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: GDAP1L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ganglioside-induced differentiation-associated protein 1-like 1
translation: MATPNNVTPTNCSWWPISALENDAGKGKDGEENQDPTDPALKAQDRLVLYHWTQSFSSQKVRLVIAEKGLPCEERDVSMPLLEHKEPWFMRLNLGEEVPVIIHRDNIISDYNQIIDYMEKNFTGDNVPQLIPEPGTPLHSRVLQYRELLDSLPMDAYTHGCILHPELTTDSMIPKYATAEIRRHLANASTELMKLDHEEEPPLTEPYLSKQKKLMAKILEHDNVNYLKKILGELGMVLDQIEAELEKRKLEYQGQKCELWLCGCVFTLADVLLGATLHRLKFLGLSKKYWEDGSRPNLQSFFDRIQKRFAFRKVLGDIHTTLLSAVVPNAFRLVKRKPPSFFGASFLMGSLGGMGYFAYWYLKKKYI
SIO_010081: GDAP1L1
subclass of: SO_0000673
so part of: GDAP1L1
location: join(1775376..1775555,1777840..1778032,1780709..1780882,1783196..1783293,1783385..1783499,1786119..1786462)
location: region:1775376-1786462:1
so has part: feature:1775376-1775555:1:exon
so has part: feature:1777840-1778032:1:exon
so has part: feature:1780709-1780882:1:exon
so has part: feature:1783196-1783293:1:exon
so has part: feature:1783385-1783499:1:exon
so has part: feature:1786119-1786462:1:exon

XP_032054275.1
type: Protein
SIO_000068: ncbiprotein

position:1775376:1
position: 1775376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1786462:1
position: 1786462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1775376-1775555:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1777840-1778032:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1780709-1780882:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1783196-1783293:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1783385-1783499:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1786119-1786462:1:exon

FITM2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: FITM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1794442..1799941)
location: region:1794442-1799941:-1
so has part: feature:1794442-1799941:-1:exon
subclass of: SO_0000010

116495668
type: Gene
SIO_000068: ncbigene

position:1794442:-1
position: 1794442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1799941:-1
position: 1799941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1794442-1799941:-1:exon

FITM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: FITM2
product: fat storage inducing transmembrane protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198321.1
SIO_010081: FITM2
subclass of: SO_0000673
so part of: FITM2
location: complement(join(1794442..1797892,1799730..1799941))
location: region:1794442-1799941:-1
so has part: feature:1799730-1799941:-1:exon
so has part: feature:1794442-1797892:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1799730-1799941:-1:exon

position:1799730:-1
position: 1799730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1794442-1797892:-1:exon

position:1797892:-1
position: 1797892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FITM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: FITM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fat storage-inducing transmembrane protein 2
translation: MERLERCSRSLRAGLAAGAVRRRLPWVLLGIVLLGSALKDGDLVPETPMQNKRNLLNVYFVKVAWAWTFWLLLPFIGVTTYLFAKSKFLYGPTKSILTALRRLSALLVGTAIWYVCTGLFMYIENLTGMCSTSGKHNEPHRLYATKQECHQNNGIWNGFDISGHCFLLSYCALMIVEEMAVLEGLSIDQNSKLRVVVNSLFVSLCFLTMIWVFMFVCTAIYFHDFSQKLLGALIGLSAWYVTYRVWYLKPFSPGLPLPNIPLSSKKYSYSR
SIO_010081: FITM2
subclass of: SO_0000673
so part of: FITM2
location: complement(join(1797250..1797892,1799730..1799902))
location: region:1797250-1799902:-1
so has part: feature:1799730-1799902:-1:exon
so has part: feature:1797250-1797892:-1:exon

XP_032054212.1
type: Protein
SIO_000068: ncbiprotein

position:1797250:-1
position: 1797250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1799902:-1
position: 1799902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1799730-1799902:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1797250-1797892:-1:exon

R3HDML
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: R3HDML
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1813196..1816024
location: region:1813196-1816024:1
so has part: feature:1813196-1816024:1:exon
subclass of: SO_0000010

116495912
type: Gene
SIO_000068: ncbigene

position:1813196:1
position: 1813196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1816024:1
position: 1816024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1813196-1816024:1:exon

R3HDML
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: R3HDML
product: R3H domain containing like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_032198655.1
SIO_010081: R3HDML
subclass of: SO_0000673
so part of: R3HDML
location: join(1813196..1813456,1814391..1814509,1814659..1814791,1815686..1815801,1815892..1816024)
location: region:1813196-1816024:1
so has part: feature:1813196-1813456:1:exon
so has part: feature:1814391-1814509:1:exon
so has part: feature:1814659-1814791:1:exon
so has part: feature:1815686-1815801:1:exon
so has part: feature:1815892-1816024:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1813196-1813456:1:exon

position:1813456:1
position: 1813456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1814391-1814509:1:exon

position:1814391:1
position: 1814391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1814509:1
position: 1814509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1814659-1814791:1:exon

position:1814659:1
position: 1814659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1814791:1
position: 1814791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1815686-1815801:1:exon

position:1815686:1
position: 1815686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1815801:1
position: 1815801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1815892-1816024:1:exon

position:1815892:1
position: 1815892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

R3HDML
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: R3HDML
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidase inhibitor R3HDML
translation: MPRLRLHLCFTGVLCWLAHEAGSFALPNATELLSPPSSAGPGPAPGTGVPRGRRRRSLAPREVSAILDYHNQVRAQVSPPAANMEYMVWDERLARAAEAWAVQCVWDHGPPQLMKYVGQNLSIHSGRYRSVVDMVRSWHHEQQHFSFPHPRECNPRCPSKCSGSVCSHYTQMVWASSNRLGCAIHACSNVRVWGSTWRRAVLLVCNYAIKGNWIGEAPYKVGRPCSACPPSYGGVCSNNMCFTGLKSNQVGWL
SIO_010081: R3HDML
subclass of: SO_0000673
so part of: R3HDML
location: join(1813196..1813456,1814391..1814509,1814659..1814791,1815686..1815801,1815892..1816024)
location: region:1813196-1816024:1
so has part: feature:1813196-1813456:1:exon
so has part: feature:1814391-1814509:1:exon
so has part: feature:1814659-1814791:1:exon
so has part: feature:1815686-1815801:1:exon
so has part: feature:1815892-1816024:1:exon

XP_032054546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1813196-1813456:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1814391-1814509:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1814659-1814791:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1815686-1815801:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1815892-1816024:1:exon

HNF4A
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: HNF4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1833463..1850345
location: region:1833463-1850345:1
so has part: feature:1833463-1850345:1:exon
subclass of: SO_0000010

116495749
type: Gene
SIO_000068: ncbigene

position:1833463:1
position: 1833463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1850345:1
position: 1850345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1833463-1850345:1:exon

HNF4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: HNF4A
product: hepatocyte nuclear factor 4 alpha, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_032198442.1
SIO_010081: HNF4A
subclass of: SO_0000673
so part of: HNF4A
location: join(1833463..1833583,1837408..1837585,1839413..1839507,1841799..1841905,1844076..1844231,1847476..1847563,1848045..1848200,1848491..1848727,1849422..1849544,1850203..1850345)
location: region:1833463-1850345:1
so has part: feature:1833463-1833583:1:exon
so has part: feature:1837408-1837585:1:exon
so has part: feature:1839413-1839507:1:exon
so has part: feature:1841799-1841905:1:exon
so has part: feature:1844076-1844231:1:exon
so has part: feature:1847476-1847563:1:exon
so has part: feature:1848045-1848200:1:exon
so has part: feature:1848491-1848727:1:exon
so has part: feature:1849422-1849544:1:exon
so has part: feature:1850203-1850345:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1833463-1833583:1:exon

position:1833583:1
position: 1833583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1837408-1837585:1:exon

position:1837408:1
position: 1837408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1837585:1
position: 1837585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1839413-1839507:1:exon

position:1839413:1
position: 1839413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1839507:1
position: 1839507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1841799-1841905:1:exon

position:1841799:1
position: 1841799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1841905:1
position: 1841905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1844076-1844231:1:exon

position:1844076:1
position: 1844076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1844231:1
position: 1844231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1847476-1847563:1:exon

position:1847476:1
position: 1847476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1847563:1
position: 1847563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1848045-1848200:1:exon

position:1848045:1
position: 1848045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1848200:1
position: 1848200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1848491-1848727:1:exon

position:1848491:1
position: 1848491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1848727:1
position: 1848727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1849422-1849544:1:exon

position:1849422:1
position: 1849422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1849544:1
position: 1849544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1850203-1850345:1:exon

position:1850203:1
position: 1850203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HNF4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: HNF4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatocyte nuclear factor 4-alpha isoform X2
translation: MIMRLSKALIDMEMADYSAALDPAYTTLEFENMQVLAMGNADTSPSEAANLNTSNSIGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFNRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNERDRISTRRSSYEDSSLPSINVLLQAEVLAQQISSPVPVMNGDIRGKKIANIADVCESMKQQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGVAKRSMVFKDVLLLGNDHIIPRNCPELVEVSRVAIRILDELVLPFQELQIDDNEYACLKAIIFFDPDAKGLSDPSKIKRMRYQVQVSLEDYINDRQYDSRGRFGELLLLLPVLQSITWQMIEQIQFVKLFGMAKIDNLLQEMLLGGSSSETPHAHHPLHPHLIQENLGTNVIVANTMPPQMHNGQMSTPETPQPSPPAGSGPEQYKLLPGAIATVAKQPSSIPQPAITKQEVI
SIO_010081: HNF4A
subclass of: SO_0000673
so part of: HNF4A
location: join(1833463..1833583,1837408..1837585,1839413..1839507,1841799..1841905,1844076..1844231,1847476..1847563,1848045..1848200,1848491..1848727,1849422..1849544,1850203..1850345)
location: region:1833463-1850345:1
so has part: feature:1833463-1833583:1:exon
so has part: feature:1837408-1837585:1:exon
so has part: feature:1839413-1839507:1:exon
so has part: feature:1841799-1841905:1:exon
so has part: feature:1844076-1844231:1:exon
so has part: feature:1847476-1847563:1:exon
so has part: feature:1848045-1848200:1:exon
so has part: feature:1848491-1848727:1:exon
so has part: feature:1849422-1849544:1:exon
so has part: feature:1850203-1850345:1:exon

XP_032054333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1833463-1833583:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1837408-1837585:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1839413-1839507:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1841799-1841905:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1844076-1844231:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1847476-1847563:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1848045-1848200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1848491-1848727:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1849422-1849544:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1850203-1850345:1:exon

HNF4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: HNF4A
product: hepatocyte nuclear factor 4 alpha, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
transcript id: XM_032198441.1
SIO_010081: HNF4A
subclass of: SO_0000673
so part of: HNF4A
location: join(1833469..1833583,1837411..1837585,1839413..1839507,1841799..1841905,1844076..1844231,1847476..1847563,1848045..1848200,1848491..1848727,1849422..1849548,1850162..1850345)
location: region:1833469-1850345:1
so has part: feature:1833469-1833583:1:exon
so has part: feature:1837411-1837585:1:exon
so has part: feature:1839413-1839507:1:exon
so has part: feature:1841799-1841905:1:exon
so has part: feature:1844076-1844231:1:exon
so has part: feature:1847476-1847563:1:exon
so has part: feature:1848045-1848200:1:exon
so has part: feature:1848491-1848727:1:exon
so has part: feature:1849422-1849548:1:exon
so has part: feature:1850162-1850345:1:exon

position:1833469:1
position: 1833469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1833469-1833583:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1837411-1837585:1:exon

position:1837411:1
position: 1837411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1839413-1839507:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1841799-1841905:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1844076-1844231:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1847476-1847563:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1848045-1848200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1848491-1848727:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1849422-1849548:1:exon

position:1849548:1
position: 1849548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1850162-1850345:1:exon

position:1850162:1
position: 1850162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HNF4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: HNF4A
product: hepatocyte nuclear factor 4 alpha, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
transcript id: XM_032198443.1
SIO_010081: HNF4A
subclass of: SO_0000673
so part of: HNF4A
location: join(1833469..1833583,1837411..1837585,1839413..1839507,1841799..1841905,1844076..1844231,1847476..1847563,1848045..1848200,1848491..1848727,1849422..1849544,1850203..1850345)
location: region:1833469-1850345:1
so has part: feature:1833469-1833583:1:exon
so has part: feature:1837411-1837585:1:exon
so has part: feature:1839413-1839507:1:exon
so has part: feature:1841799-1841905:1:exon
so has part: feature:1844076-1844231:1:exon
so has part: feature:1847476-1847563:1:exon
so has part: feature:1848045-1848200:1:exon
so has part: feature:1848491-1848727:1:exon
so has part: feature:1849422-1849544:1:exon
so has part: feature:1850203-1850345:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1833469-1833583:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1837411-1837585:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1839413-1839507:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1841799-1841905:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1844076-1844231:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1847476-1847563:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1848045-1848200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1848491-1848727:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1849422-1849544:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1850203-1850345:1:exon

HNF4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: HNF4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatocyte nuclear factor 4-alpha isoform X1
translation: MRLSKALIDMEMADYSAALDPAYTTLEFENMQVLAMGNDTSPSEAANLNTSNSIGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFNRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNERDRISTRRSSYEDSSLPSINVLLQAEVLAQQISSPVPVMNGDIRGKKIANIADVCESMKQQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGVAKRSMVFKDVLLLGNDHIIPRNCPELVEVSRVAIRILDELVLPFQELQIDDNEYACLKAIIFFDPDAKGLSDPSKIKRMRYQVQVSLEDYINDRQYDSRGRFGELLLLLPVLQSITWQMIEQIQFVKLFGMAKIDNLLQEMLLGGSSSETPHAHHPLHPHLIQENLGTNVIVANTMPPQMHNGQMCESMWPSSNFVCLSVATPETPQPSPPAGSGPEQYKLLPGAIATVAKQPSSIPQPAITKQEVI
SIO_010081: HNF4A
subclass of: SO_0000673
so part of: HNF4A
location: join(1833469..1833583,1837411..1837585,1839413..1839507,1841799..1841905,1844076..1844231,1847476..1847563,1848045..1848200,1848491..1848727,1849422..1849548,1850162..1850345)
location: region:1833469-1850345:1
so has part: feature:1833469-1833583:1:exon
so has part: feature:1837411-1837585:1:exon
so has part: feature:1839413-1839507:1:exon
so has part: feature:1841799-1841905:1:exon
so has part: feature:1844076-1844231:1:exon
so has part: feature:1847476-1847563:1:exon
so has part: feature:1848045-1848200:1:exon
so has part: feature:1848491-1848727:1:exon
so has part: feature:1849422-1849548:1:exon
so has part: feature:1850162-1850345:1:exon

XP_032054332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1833469-1833583:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1837411-1837585:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1839413-1839507:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1841799-1841905:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1844076-1844231:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1847476-1847563:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1848045-1848200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1848491-1848727:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1849422-1849548:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1850162-1850345:1:exon

HNF4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: HNF4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatocyte nuclear factor 4-alpha isoform X3
translation: MRLSKALIDMEMADYSAALDPAYTTLEFENMQVLAMGNDTSPSEAANLNTSNSIGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFNRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNERDRISTRRSSYEDSSLPSINVLLQAEVLAQQISSPVPVMNGDIRGKKIANIADVCESMKQQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGVAKRSMVFKDVLLLGNDHIIPRNCPELVEVSRVAIRILDELVLPFQELQIDDNEYACLKAIIFFDPDAKGLSDPSKIKRMRYQVQVSLEDYINDRQYDSRGRFGELLLLLPVLQSITWQMIEQIQFVKLFGMAKIDNLLQEMLLGGSSSETPHAHHPLHPHLIQENLGTNVIVANTMPPQMHNGQMSTPETPQPSPPAGSGPEQYKLLPGAIATVAKQPSSIPQPAITKQEVI
SIO_010081: HNF4A
subclass of: SO_0000673
so part of: HNF4A
location: join(1833469..1833583,1837411..1837585,1839413..1839507,1841799..1841905,1844076..1844231,1847476..1847563,1848045..1848200,1848491..1848727,1849422..1849544,1850203..1850345)
location: region:1833469-1850345:1
so has part: feature:1833469-1833583:1:exon
so has part: feature:1837411-1837585:1:exon
so has part: feature:1839413-1839507:1:exon
so has part: feature:1841799-1841905:1:exon
so has part: feature:1844076-1844231:1:exon
so has part: feature:1847476-1847563:1:exon
so has part: feature:1848045-1848200:1:exon
so has part: feature:1848491-1848727:1:exon
so has part: feature:1849422-1849544:1:exon
so has part: feature:1850203-1850345:1:exon

XP_032054334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1833469-1833583:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1837411-1837585:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1839413-1839507:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1841799-1841905:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1844076-1844231:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1847476-1847563:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1848045-1848200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1848491-1848727:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1849422-1849544:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1850203-1850345:1:exon

TTPAL
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TTPAL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1859271..1868209
location: region:1859271-1868209:1
so has part: feature:1859271-1868209:1:exon
subclass of: SO_0000010

116495577
type: Gene
SIO_000068: ncbigene

position:1859271:1
position: 1859271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1868209:1
position: 1868209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1859271-1868209:1:exon

TTPAL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: TTPAL
product: alpha tocopherol transfer protein like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198160.1
SIO_010081: TTPAL
subclass of: SO_0000673
so part of: TTPAL
location: join(1859271..1859315,1860214..1860666,1861370..1861563,1863661..1863771,1864459..1868042,1868073..1868209)
location: region:1859271-1868209:1
so has part: feature:1859271-1859315:1:exon
so has part: feature:1860214-1860666:1:exon
so has part: feature:1861370-1861563:1:exon
so has part: feature:1863661-1863771:1:exon
so has part: feature:1864459-1868042:1:exon
so has part: feature:1868073-1868209:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1859271-1859315:1:exon

position:1859315:1
position: 1859315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1860214-1860666:1:exon

position:1860214:1
position: 1860214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1860666:1
position: 1860666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1861370-1861563:1:exon

position:1861370:1
position: 1861370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1861563:1
position: 1861563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1863661-1863771:1:exon

position:1863661:1
position: 1863661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1863771:1
position: 1863771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1864459-1868042:1:exon

position:1864459:1
position: 1864459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1868042:1
position: 1868042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1868073-1868209:1:exon

position:1868073:1
position: 1868073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TTPAL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: TTPAL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-tocopherol transfer protein-like
translation: MSGDSDCTRTSPSAGSLSDNEFLPDRPKYVCSLSPDLITKAREELQEKPEWRLRDVQALRDMVCKDYPSLGTCLDDAFLLRFLRARKFDYDRALQLLVNYHTCRRSWPEVFNNLKPSAIKPVLESGFVTVLPCLDPEGRHIVCIRPDRWTPSNYPITENIRAIYLTLEKLIQSEETQVNGIVILADYKGVSLSKASHFGPFVAKKVIGILQDGFPIRIKAVNIINEPRIFKGIFAIIKPFLKEKIANRFFLHGCDLNSLHQNIPPVILPEEYGGTSGKLDISAWNELLLASEEDFLHDFSQLVLPCDSSPQDMLVSGDADEKQCDDSLRGMKPQLYYCY
SIO_010081: TTPAL
subclass of: SO_0000673
so part of: TTPAL
location: join(1860228..1860666,1861370..1861563,1863661..1863771,1864459..1864734)
location: region:1860228-1864734:1
so has part: feature:1860228-1860666:1:exon
so has part: feature:1861370-1861563:1:exon
so has part: feature:1863661-1863771:1:exon
so has part: feature:1864459-1864734:1:exon

XP_032054051.1
type: Protein
SIO_000068: ncbiprotein

position:1860228:1
position: 1860228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1864734:1
position: 1864734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1860228-1860666:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1861370-1861563:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1863661-1863771:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1864459-1864734:1:exon

SERINC3
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: SERINC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1868605..1876332)
location: region:1868605-1876332:-1
so has part: feature:1868605-1876332:-1:exon
subclass of: SO_0000010

116495576
type: Gene
SIO_000068: ncbigene

position:1868605:-1
position: 1868605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1876332:-1
position: 1876332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1868605-1876332:-1:exon

SERINC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SERINC3
product: serine incorporator 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198158.1
SIO_010081: SERINC3
subclass of: SO_0000673
so part of: SERINC3
location: complement(join(1868605..1869542,1870355..1870582,1870993..1871170,1871549..1871639,1872329..1872498,1873363..1873500,1874195..1874274,1875261..1875454,1875945..1876106,1876260..1876332))
location: region:1868605-1876332:-1
so has part: feature:1876260-1876332:-1:exon
so has part: feature:1875945-1876106:-1:exon
so has part: feature:1875261-1875454:-1:exon
so has part: feature:1874195-1874274:-1:exon
so has part: feature:1873363-1873500:-1:exon
so has part: feature:1872329-1872498:-1:exon
so has part: feature:1871549-1871639:-1:exon
so has part: feature:1870993-1871170:-1:exon
so has part: feature:1870355-1870582:-1:exon
so has part: feature:1868605-1869542:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1876260-1876332:-1:exon

position:1876260:-1
position: 1876260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1875945-1876106:-1:exon

position:1875945:-1
position: 1875945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1876106:-1
position: 1876106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1875261-1875454:-1:exon

position:1875261:-1
position: 1875261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1875454:-1
position: 1875454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1874195-1874274:-1:exon

position:1874195:-1
position: 1874195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1874274:-1
position: 1874274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1873363-1873500:-1:exon

position:1873363:-1
position: 1873363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1873500:-1
position: 1873500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1872329-1872498:-1:exon

position:1872329:-1
position: 1872329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1872498:-1
position: 1872498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1871549-1871639:-1:exon

position:1871549:-1
position: 1871549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1871639:-1
position: 1871639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1870993-1871170:-1:exon

position:1870993:-1
position: 1870993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1871170:-1
position: 1871170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1870355-1870582:-1:exon

position:1870355:-1
position: 1870355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1870582:-1
position: 1870582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1868605-1869542:-1:exon

position:1869542:-1
position: 1869542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SERINC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SERINC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine incorporator 3
translation: MGAVLGLCSLGSWVPCLCGGASCLLCRCCPSSSNSTVTRLIYAFLLLLSTAVACIMLAPGMEEQLKKVPGFCDEGLHTLIPHLNGFVSCDVFVGYRAVYRISFAMAVFFFVLSLMMIAVKTSNDPRAAVHNGFWFFKIAAIVGIMVGAFYIPEGPFTRAWFVVGIFGAFCFILIQLVLLVDFAHSWNENWVERMEEGNSKCWYAALLSCTSLFYGLSLVFVVLFYVFYTKPEDCAENKFFISINMILCIAVSIVSILPKVQEYQPHSGLLQSSIITLYTMYLTWSAMSNEPERNCNPSLLNIITQIATPTVFPANTTVVPATPAPPKSLQWWDAQSIVGLVIFVLCLLYSSIRSSSNSQVNKLMLSGSDSAILEEAGGAGSRAAEEGEVRRVVDNEKDGVQYSYTFFHFMLFLASLYIMMTLTNWYSPDADFKTMTSKWPAVWVKITSSWLCLLLYLWTLVAPLVLTNRDFS
SIO_010081: SERINC3
subclass of: SO_0000673
so part of: SERINC3
location: complement(join(1869404..1869542,1870355..1870582,1870993..1871170,1871549..1871639,1872329..1872498,1873363..1873500,1874195..1874274,1875261..1875454,1875945..1876106,1876260..1876298))
location: region:1869404-1876298:-1
so has part: feature:1876260-1876298:-1:exon
so has part: feature:1875945-1876106:-1:exon
so has part: feature:1875261-1875454:-1:exon
so has part: feature:1874195-1874274:-1:exon
so has part: feature:1873363-1873500:-1:exon
so has part: feature:1872329-1872498:-1:exon
so has part: feature:1871549-1871639:-1:exon
so has part: feature:1870993-1871170:-1:exon
so has part: feature:1870355-1870582:-1:exon
so has part: feature:1869404-1869542:-1:exon

XP_032054049.1
type: Protein
SIO_000068: ncbiprotein

position:1869404:-1
position: 1869404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1876298:-1
position: 1876298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1876260-1876298:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1875945-1876106:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1875261-1875454:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1874195-1874274:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1873363-1873500:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1872329-1872498:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1871549-1871639:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1870993-1871170:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1870355-1870582:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1869404-1869542:-1:exon

PKIG
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: PKIG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1890932..1905992
location: region:1890932-1905992:1
so has part: feature:1890932-1905992:1:exon
subclass of: SO_0000010

116495693
type: Gene
SIO_000068: ncbigene

position:1890932:1
position: 1890932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1905992:1
position: 1905992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1890932-1905992:1:exon

PKIG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: PKIG
product: cAMP-dependent protein kinase inhibitor gamma
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198357.1
SIO_010081: PKIG
subclass of: SO_0000673
so part of: PKIG
location: join(1890932..1891052,1896101..1896168,1903853..1904028,1905101..1905992)
location: region:1890932-1905992:1
so has part: feature:1890932-1891052:1:exon
so has part: feature:1896101-1896168:1:exon
so has part: feature:1903853-1904028:1:exon
so has part: feature:1905101-1905992:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1890932-1891052:1:exon

position:1891052:1
position: 1891052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1896101-1896168:1:exon

position:1896101:1
position: 1896101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1896168:1
position: 1896168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1903853-1904028:1:exon

position:1903853:1
position: 1903853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1904028:1
position: 1904028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1905101-1905992:1:exon

position:1905101:1
position: 1905101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PKIG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: PKIG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cAMP-dependent protein kinase inhibitor gamma
translation: MEVESSTYTDFISCDRAGRRNAVHDIQRDATTISMRKLTEDISDLTVEGADSEAPSTSSESDPEARPKEQENKPSP
SIO_010081: PKIG
subclass of: SO_0000673
so part of: PKIG
location: join(1903878..1904028,1905101..1905180)
location: region:1903878-1905180:1
so has part: feature:1903878-1904028:1:exon
so has part: feature:1905101-1905180:1:exon

XP_032054248.1
type: Protein
SIO_000068: ncbiprotein

position:1903878:1
position: 1903878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1905180:1
position: 1905180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1903878-1904028:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1905101-1905180:1:exon

ADA
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: ADA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1907843..1923008)
location: region:1907843-1923008:-1
so has part: feature:1907843-1923008:-1:exon
subclass of: SO_0000010

116495764
type: Gene
SIO_000068: ncbigene

position:1907843:-1
position: 1907843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1923008:-1
position: 1923008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1907843-1923008:-1:exon

ADA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ADA
product: adenosine deaminase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032198465.1
SIO_010081: ADA
subclass of: SO_0000673
so part of: ADA
location: complement(join(1907843..1907956,1909116..1909245,1909513..1909580,1909971..1910072,1910190..1910261,1910895..1911019,1912877..1912992,1914179..1914322,1914419..1914541,1916604..1916665,1922953..1923008))
location: region:1907843-1923008:-1
so has part: feature:1922953-1923008:-1:exon
so has part: feature:1916604-1916665:-1:exon
so has part: feature:1914419-1914541:-1:exon
so has part: feature:1914179-1914322:-1:exon
so has part: feature:1912877-1912992:-1:exon
so has part: feature:1910895-1911019:-1:exon
so has part: feature:1910190-1910261:-1:exon
so has part: feature:1909971-1910072:-1:exon
so has part: feature:1909513-1909580:-1:exon
so has part: feature:1909116-1909245:-1:exon
so has part: feature:1907843-1907956:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1922953-1923008:-1:exon

position:1922953:-1
position: 1922953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1916604-1916665:-1:exon

position:1916604:-1
position: 1916604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1916665:-1
position: 1916665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1914419-1914541:-1:exon

position:1914419:-1
position: 1914419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1914541:-1
position: 1914541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1914179-1914322:-1:exon

position:1914179:-1
position: 1914179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1914322:-1
position: 1914322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1912877-1912992:-1:exon

position:1912877:-1
position: 1912877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1912992:-1
position: 1912992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1910895-1911019:-1:exon

position:1910895:-1
position: 1910895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1911019:-1
position: 1911019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1910190-1910261:-1:exon

position:1910190:-1
position: 1910190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1910261:-1
position: 1910261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1909971-1910072:-1:exon

position:1909971:-1
position: 1909971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1910072:-1
position: 1910072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1909513-1909580:-1:exon

position:1909513:-1
position: 1909513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1909580:-1
position: 1909580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1909116-1909245:-1:exon

position:1909116:-1
position: 1909116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1909245:-1
position: 1909245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1907843-1907956:-1:exon

position:1907956:-1
position: 1907956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: ADA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenosine deaminase
translation: MEQGLRVFDGPKVELHIHLDGAIRPETILYFGKKRGIPLPGDTVDELLKHISYNTPLSLPEFLEKFNYYMPAIAGDREAVRRIAYELVETKAKEGVTYVEIRYSPHLLANCSVSPIPWGQAEGDLTPDEVVHLVNQGLQDGERDFHIKARSILCCMRHMPSWSPEVVELCKKYRNNSVVAIDLAGDESLKVEDTSGHKEAYEEAERCGIHRTVHAGEAGPPAMIKEAVYLLKTERIGHGYHVLEDPELYKELLRTKMHFEVCPWSSYLTGACLPDFRKHPAVQFRKDRANYSINTDDPLIFNSTIDTDYSITKDYMGFTEEDFKRVNINAAQSSFLPEKEKQELLNTLYEAYGMVSNAS
SIO_010081: ADA
subclass of: SO_0000673
so part of: ADA
location: complement(join(1907855..1907956,1909116..1909245,1909513..1909580,1909971..1910072,1910190..1910261,1910895..1911019,1912877..1912992,1914179..1914322,1914419..1914541,1916604..1916665,1922953..1922988))
location: region:1907855-1922988:-1
so has part: feature:1922953-1922988:-1:exon
so has part: feature:1916604-1916665:-1:exon
so has part: feature:1914419-1914541:-1:exon
so has part: feature:1914179-1914322:-1:exon
so has part: feature:1912877-1912992:-1:exon
so has part: feature:1910895-1911019:-1:exon
so has part: feature:1910190-1910261:-1:exon
so has part: feature:1909971-1910072:-1:exon
so has part: feature:1909513-1909580:-1:exon
so has part: feature:1909116-1909245:-1:exon
so has part: feature:1907855-1907956:-1:exon

XP_032054356.1
type: Protein
SIO_000068: ncbiprotein

position:1907855:-1
position: 1907855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1922988:-1
position: 1922988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1922953-1922988:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1916604-1916665:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1914419-1914541:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1914179-1914322:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1912877-1912992:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1910895-1911019:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1910190-1910261:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1909971-1910072:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1909513-1909580:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1909116-1909245:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1907855-1907956:-1:exon

CCN5
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: CCN5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1939261..1942753
location: region:1939261-1942753:1
so has part: feature:1939261-1942753:1:exon
subclass of: SO_0000010

116495789
type: Gene
SIO_000068: ncbigene

position:1939261:1
position: 1939261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1942753:1
position: 1942753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1939261-1942753:1:exon

CCN5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: CCN5
product: cellular communication network factor 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032198501.1
SIO_010081: CCN5
subclass of: SO_0000673
so part of: CCN5
location: join(1939261..1939320,1941345..1941552,1942106..1942351,1942512..1942753)
location: region:1939261-1942753:1
so has part: feature:1939261-1939320:1:exon
so has part: feature:1941345-1941552:1:exon
so has part: feature:1942106-1942351:1:exon
so has part: feature:1942512-1942753:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1939261-1939320:1:exon

position:1939320:1
position: 1939320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1941345-1941552:1:exon

position:1941345:1
position: 1941345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1941552:1
position: 1941552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1942106-1942351:1:exon

position:1942106:1
position: 1942106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1942351:1
position: 1942351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1942512-1942753:1:exon

position:1942512:1
position: 1942512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCN5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: CCN5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WNT1-inducible-signaling pathway protein 2
translation: MRLRLEKQLLFLSLLCILSKVCAQLCRRPCYCPWVPPRCPRGSPLVLDGCGCCKVCARRLGEPCDFLHVCDRSQGLVCDYSTGTGATCNFEDVEEGCEVNGRIYRDGEVFQPSCKLQCRCLDGGFTCVPLCQEDVRLPTPDCPHPRRVDIPGKCCPEWVCEAGERLQDARAAPAAASPVVPYPCRPWGTEWSACSATCGVGISTRVSNQNRSCRLETQRRLCMARPCPALPVAPPAVSEGLGAAKTSGQQL
SIO_010081: CCN5
subclass of: SO_0000673
so part of: CCN5
location: join(1939261..1939320,1941345..1941552,1942106..1942351,1942512..1942753)
location: region:1939261-1942753:1
so has part: feature:1939261-1939320:1:exon
so has part: feature:1941345-1941552:1:exon
so has part: feature:1942106-1942351:1:exon
so has part: feature:1942512-1942753:1:exon

XP_032054392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1939261-1939320:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1941345-1941552:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1942106-1942351:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1942512-1942753:1:exon

LOC116495790
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116495790
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1946201..1947238
location: region:1946201-1947238:1
so has part: feature:1946201-1947238:1:exon
subclass of: SO_0000010

116495790
type: Gene
SIO_000068: ncbigene

position:1946201:1
position: 1946201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1947238:1
position: 1947238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1946201-1947238:1:exon

LOC116495790
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116495790
product: P2Y purinoceptor 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_032198502.1
SIO_010081: LOC116495790
subclass of: SO_0000673
so part of: LOC116495790
location: 1946201..1947238
location: region:1946201-1947238:1
so has part: feature:1946201-1947238:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1946201-1947238:1:exon

LOC116495790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116495790
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 1-like
translation: MAAQAPLSGNSSSAPCPINAAFAHHFLPGVYLVVTPLGLVGNALGLWHLRATPRGPLSLLVGNLGLADLLYVGTLPFLISYYLQGRTWPFGRAWCRLTRGLFHLNLYASIGFLTCISLHRYLGIVHPLRARGRCQELFSSAWLSAAVWGWVVAQVAPDLAFSKMNPTGTQCHDTTEQDSLDRYLAYTAAVTATGFVVPFLIIVGCYCHVVVVLCRNDTMDPGLRRRSIRLVVLVMVLFSVCFLPYHVFRNLNLLSRRWQLQGSCTQASRDIYVSYQVTRGLASFNSALNPLLYVMTSKDCTSRLRTIYRRAKKSLESAFTRENSRQALETRTSNISGEQEASDEL
SIO_010081: LOC116495790
subclass of: SO_0000673
so part of: LOC116495790
location: 1946201..1947238
location: region:1946201-1947238:1
so has part: feature:1946201-1947238:1:exon

XP_032054393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1946201-1947238:1:exon

KCNK15
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: KCNK15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1955986..1959318
location: region:1955986-1959318:1
so has part: feature:1955986-1959318:1:exon
subclass of: SO_0000010

116495885
type: Gene
SIO_000068: ncbigene

position:1955986:1
position: 1955986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1959318:1
position: 1959318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1955986-1959318:1:exon

KCNK15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: KCNK15
product: potassium two pore domain channel subfamily K member 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 50% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032198615.1
SIO_010081: KCNK15
subclass of: SO_0000673
so part of: KCNK15
location: join(1955986..1956268,1958408..1959318)
location: region:1955986-1959318:1
so has part: feature:1955986-1956268:1:exon
so has part: feature:1958408-1959318:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1955986-1956268:1:exon

position:1956268:1
position: 1956268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1958408-1959318:1:exon

position:1958408:1
position: 1958408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNK15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: KCNK15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium channel subfamily K member 15
translation: MKRQNLRTAALILCIFSYLLVGAAVFDALESEAESGRKRLLEQKRGELRRKYRFSADDYRELERLVLQAEPHRAGRQWKFAGSFYFAITVITTIGYGHAAPGTDAGKVFCMFYAILGIPLTLVMFQSLGERMNTLVRLLLKKVKKCLGMRTTNVSMENMVLVGFLSCMGTLCIGAAAFSYFEGWTFFHAYYYCFITLTTIGFGDFVALQKNEALQKKPPYVAFSFMYILVGLTVIGAFLNLVVLRFLTMNSEDERRDAEERASLRRARNNLHPPPGEAGRSSKAIFLPAEERTSQLNLIPLVQEDAERRRRSANSSAKVPSFCTCLCYRAPLCGSPVPSHPETLSCHTNPVYYNSISYKIDEVSLSTRGQTGSSPASTLSSGSPRCRQRPRPRRKSI
SIO_010081: KCNK15
subclass of: SO_0000673
so part of: KCNK15
location: join(1955986..1956268,1958408..1959318)
location: region:1955986-1959318:1
so has part: feature:1955986-1956268:1:exon
so has part: feature:1958408-1959318:1:exon

XP_032054506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1955986-1956268:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1958408-1959318:1:exon

RIMS4
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: RIMS4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1961638..2019390)
location: region:1961638-2019390:-1
so has part: feature:1961638-2019390:-1:exon
subclass of: SO_0000010

116495579
type: Gene
SIO_000068: ncbigene

position:1961638:-1
position: 1961638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2019390:-1
position: 2019390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1961638-2019390:-1:exon

RIMS4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: RIMS4
product: regulating synaptic membrane exocytosis 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198162.1
SIO_010081: RIMS4
subclass of: SO_0000673
so part of: RIMS4
location: complement(join(1961638..1969490,1972084..1972223,1972502..1972603,1973252..1973364,1984771..1984912,2019184..2019390))
location: region:1961638-2019390:-1
so has part: feature:2019184-2019390:-1:exon
so has part: feature:1984771-1984912:-1:exon
so has part: feature:1973252-1973364:-1:exon
so has part: feature:1972502-1972603:-1:exon
so has part: feature:1972084-1972223:-1:exon
so has part: feature:1961638-1969490:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2019184-2019390:-1:exon

position:2019184:-1
position: 2019184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1984771-1984912:-1:exon

position:1984771:-1
position: 1984771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1984912:-1
position: 1984912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1973252-1973364:-1:exon

position:1973252:-1
position: 1973252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1973364:-1
position: 1973364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1972502-1972603:-1:exon

position:1972502:-1
position: 1972502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1972603:-1
position: 1972603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1972084-1972223:-1:exon

position:1972084:-1
position: 1972084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1972223:-1
position: 1972223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1961638-1969490:-1:exon

position:1969490:-1
position: 1969490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RIMS4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: RIMS4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulating synaptic membrane exocytosis protein 4
translation: MERSQSRLSLSASFEALAIYFPCMNSFDEEDADGDGRRLKGAIQRSTETGLAVEMPSRTVRQASHESIEDSMNSYGSEGNLNFSGVHLASAGQFSDFLGSMGPAQFVGRQTLATTSMGDVEIGLQERNGQLEVDIIQARGLTPKPGSKTLPAAYIKAYLLENGVCIAKKKTKVARKSLDPLYNQVLLFPESPQGKVLQVIVWGNYGRMERKHFMGVARVLLEELDLSTLAIGWYKLFPTSSMVDPTTGPLLRQSSQLSLESTVGPCCDRS
SIO_010081: RIMS4
subclass of: SO_0000673
so part of: RIMS4
location: complement(join(1969272..1969490,1972084..1972223,1972502..1972603,1973252..1973364,1984771..1984912,2019184..2019280))
location: region:1969272-2019280:-1
so has part: feature:2019184-2019280:-1:exon
so has part: feature:1984771-1984912:-1:exon
so has part: feature:1973252-1973364:-1:exon
so has part: feature:1972502-1972603:-1:exon
so has part: feature:1972084-1972223:-1:exon
so has part: feature:1969272-1969490:-1:exon

XP_032054053.1
type: Protein
SIO_000068: ncbiprotein

position:1969272:-1
position: 1969272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2019280:-1
position: 2019280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2019184-2019280:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1984771-1984912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1973252-1973364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1972502-1972603:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1972084-1972223:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1969272-1969490:-1:exon

YWHAB
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: YWHAB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2047149..2060012
location: region:2047149-2060012:1
so has part: feature:2047149-2060012:1:exon
subclass of: SO_0000010

116495583
type: Gene
SIO_000068: ncbigene

position:2047149:1
position: 2047149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2060012:1
position: 2060012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2047149-2060012:1:exon

YWHAB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: YWHAB
product: tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198169.1
SIO_010081: YWHAB
subclass of: SO_0000673
so part of: YWHAB
location: join(2047149..2047249,2053987..2054287,2055207..2055330,2056225..2056388,2057535..2057630,2058127..2060012)
location: region:2047149-2060012:1
so has part: feature:2047149-2047249:1:exon
so has part: feature:2053987-2054287:1:exon
so has part: feature:2055207-2055330:1:exon
so has part: feature:2056225-2056388:1:exon
so has part: feature:2057535-2057630:1:exon
so has part: feature:2058127-2060012:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2047149-2047249:1:exon

position:2047249:1
position: 2047249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2053987-2054287:1:exon

position:2053987:1
position: 2053987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2054287:1
position: 2054287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2055207-2055330:1:exon

position:2055207:1
position: 2055207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2055330:1
position: 2055330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2056225-2056388:1:exon

position:2056225:1
position: 2056225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2056388:1
position: 2056388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2057535-2057630:1:exon

position:2057535:1
position: 2057535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2057630:1
position: 2057630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2058127-2060012:1:exon

position:2058127:1
position: 2058127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

YWHAB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: YWHAB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 14-3-3 protein beta/alpha
translation: MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTERNEKKQQMGREYREKIEAELQDICNDVLELLDKYLIVNATQPESKVFYLKMKGDYYRYLSEVASGDNKQTTVANSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACNLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAGEGEN
SIO_010081: YWHAB
subclass of: SO_0000673
so part of: YWHAB
location: join(2053994..2054287,2055207..2055330,2056225..2056388,2057535..2057630,2058127..2058183)
location: region:2053994-2058183:1
so has part: feature:2053994-2054287:1:exon
so has part: feature:2055207-2055330:1:exon
so has part: feature:2056225-2056388:1:exon
so has part: feature:2057535-2057630:1:exon
so has part: feature:2058127-2058183:1:exon

XP_032054060.1
type: Protein
SIO_000068: ncbiprotein

position:2053994:1
position: 2053994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2058183:1
position: 2058183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2053994-2054287:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2055207-2055330:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2056225-2056388:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2057535-2057630:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2058127-2058183:1:exon

PABPC1L
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: PABPC1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2062422..2071626
location: region:2062422-2071626:1
so has part: feature:2062422-2071626:1:exon
subclass of: SO_0000010

116495879
type: Gene
SIO_000068: ncbigene

position:2062422:1
position: 2062422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2071626:1
position: 2071626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2062422-2071626:1:exon

PABPC1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: PABPC1L
product: poly(A) binding protein cytoplasmic 1 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032198607.1
SIO_010081: PABPC1L
subclass of: SO_0000673
so part of: PABPC1L
location: join(2062422..2062614,2063344..2063537,2063927..2064042,2064792..2064931,2065656..2065750,2066011..2066148,2066615..2066710,2067308..2067574,2068095..2068185,2068463..2068588,2069082..2069218,2069525..2069618,2070015..2070145,2070931..2071020,2071584..2071626)
location: region:2062422-2071626:1
so has part: feature:2062422-2062614:1:exon
so has part: feature:2063344-2063537:1:exon
so has part: feature:2063927-2064042:1:exon
so has part: feature:2064792-2064931:1:exon
so has part: feature:2065656-2065750:1:exon
so has part: feature:2066011-2066148:1:exon
so has part: feature:2066615-2066710:1:exon
so has part: feature:2067308-2067574:1:exon
so has part: feature:2068095-2068185:1:exon
so has part: feature:2068463-2068588:1:exon
so has part: feature:2069082-2069218:1:exon
so has part: feature:2069525-2069618:1:exon
so has part: feature:2070015-2070145:1:exon
so has part: feature:2070931-2071020:1:exon
so has part: feature:2071584-2071626:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2062422-2062614:1:exon

position:2062614:1
position: 2062614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2063344-2063537:1:exon

position:2063344:1
position: 2063344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2063537:1
position: 2063537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2063927-2064042:1:exon

position:2063927:1
position: 2063927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2064042:1
position: 2064042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2064792-2064931:1:exon

position:2064792:1
position: 2064792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2064931:1
position: 2064931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2065656-2065750:1:exon

position:2065656:1
position: 2065656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2065750:1
position: 2065750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2066011-2066148:1:exon

position:2066011:1
position: 2066011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2066148:1
position: 2066148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2066615-2066710:1:exon

position:2066615:1
position: 2066615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2066710:1
position: 2066710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2067308-2067574:1:exon

position:2067308:1
position: 2067308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2067574:1
position: 2067574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2068095-2068185:1:exon

position:2068095:1
position: 2068095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2068185:1
position: 2068185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2068463-2068588:1:exon

position:2068463:1
position: 2068463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2068588:1
position: 2068588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2069082-2069218:1:exon

position:2069082:1
position: 2069082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2069218:1
position: 2069218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2069525-2069618:1:exon

position:2069525:1
position: 2069525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2069618:1
position: 2069618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2070015-2070145:1:exon

position:2070015:1
position: 2070015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2070145:1
position: 2070145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2070931-2071020:1:exon

position:2070931:1
position: 2070931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2071020:1
position: 2071020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2071584-2071626:1:exon

position:2071584:1
position: 2071584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PABPC1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: PABPC1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyadenylate-binding protein 1-like
translation: MNASGPGYPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDENGSRGYGFVHFETQEAATRAIKTMNGMLLNDRKVFVGHFKSRKERDAEFGSRATEFTNVYIKNFGDDMDDDRLREIFSKFGKTLSVKVMMDSSGRSKGFGFVNFEKHEEAQKAVADMNGKEINGRVVYVGRAQKRLERQSELKRKFEQIKQERVSRYQGVNLYVKNLDDGIDDERLRKEFSPYGTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEERKAILTNQYMQRLATMRALPGPLLGSFQPPPGYFLPPIPQPQTRATFYSPSPVVPVRPATRWSAQPSRPPPYPSATPILRAAVQPRRLLSNISTMRQASTQVPRVSTTAQRVVNIGTQTVSARVPSSPTLPRGAPQYKYSSAVRNIQPLGSVPHGAPQVGEPAVHIQGQEPLTASMLAAAPPQEQKQMIGERLYPLIHAMHASLAGKITGMLLEIDNSELLLLLESPDSLHAKIEEAVAVLQAHQATETSHKGGAAAFLQ
SIO_010081: PABPC1L
subclass of: SO_0000673
so part of: PABPC1L
location: join(2062422..2062614,2063344..2063537,2063927..2064042,2064792..2064931,2065656..2065750,2066011..2066148,2066615..2066710,2067308..2067574,2068095..2068185,2068463..2068588,2069082..2069218,2069525..2069618,2070015..2070145,2070931..2071014)
location: region:2062422-2071014:1
so has part: feature:2062422-2062614:1:exon
so has part: feature:2063344-2063537:1:exon
so has part: feature:2063927-2064042:1:exon
so has part: feature:2064792-2064931:1:exon
so has part: feature:2065656-2065750:1:exon
so has part: feature:2066011-2066148:1:exon
so has part: feature:2066615-2066710:1:exon
so has part: feature:2067308-2067574:1:exon
so has part: feature:2068095-2068185:1:exon
so has part: feature:2068463-2068588:1:exon
so has part: feature:2069082-2069218:1:exon
so has part: feature:2069525-2069618:1:exon
so has part: feature:2070015-2070145:1:exon
so has part: feature:2070931-2071014:1:exon

XP_032054498.1
type: Protein
SIO_000068: ncbiprotein

position:2071014:1
position: 2071014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2062422-2062614:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2063344-2063537:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2063927-2064042:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2064792-2064931:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2065656-2065750:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2066011-2066148:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2066615-2066710:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2067308-2067574:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2068095-2068185:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2068463-2068588:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2069082-2069218:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2069525-2069618:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2070015-2070145:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2070931-2071014:1:exon

TOMM34
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TOMM34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2074508..2079104)
location: region:2074508-2079104:-1
so has part: feature:2074508-2079104:-1:exon
subclass of: SO_0000010

116495880
type: Gene
SIO_000068: ncbigene

position:2074508:-1
position: 2074508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2079104:-1
position: 2079104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2074508-2079104:-1:exon

TOMM34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: TOMM34
product: translocase of outer mitochondrial membrane 34
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198608.1
SIO_010081: TOMM34
subclass of: SO_0000673
so part of: TOMM34
location: complement(join(2074508..2075545,2076063..2076189,2076809..2076953,2077225..2077385,2078056..2078208,2078735..2078834,2078940..2079104))
location: region:2074508-2079104:-1
so has part: feature:2078940-2079104:-1:exon
so has part: feature:2078735-2078834:-1:exon
so has part: feature:2078056-2078208:-1:exon
so has part: feature:2077225-2077385:-1:exon
so has part: feature:2076809-2076953:-1:exon
so has part: feature:2076063-2076189:-1:exon
so has part: feature:2074508-2075545:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2078940-2079104:-1:exon

position:2078940:-1
position: 2078940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2078735-2078834:-1:exon

position:2078735:-1
position: 2078735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2078834:-1
position: 2078834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2078056-2078208:-1:exon

position:2078056:-1
position: 2078056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2078208:-1
position: 2078208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2077225-2077385:-1:exon

position:2077225:-1
position: 2077225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2077385:-1
position: 2077385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2076809-2076953:-1:exon

position:2076809:-1
position: 2076809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2076953:-1
position: 2076953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2076063-2076189:-1:exon

position:2076063:-1
position: 2076063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2076189:-1
position: 2076189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2074508-2075545:-1:exon

position:2075545:-1
position: 2075545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TOMM34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: TOMM34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial import receptor subunit TOM34
translation: MAAGGGSASALRRAGNEEFRRGQYGPAAQLYGRALELLEDAGEAAAEERSVLLANRAACHLKEGACRLCVADCCGALKLVPFSIKPLLRRAAAYEALESYQLAYVDYKTVLQIDCSIQAAHDGVNRMTKALQEKDGVNWREKLPPIPTVPISAQKRWNAPSAAAPATDAPPGSTSQGHPDQIAAGVERARTLKEEGNELVKKGNHKKAIEKYTESLKLNQECAAYTNRALCYLTLKQHKEAVQDCTAALRLDPKNIKAFYRRAQALKELKDYKSSIADINSLLKIEPKNTAALKLLQELKRA
SIO_010081: TOMM34
subclass of: SO_0000673
so part of: TOMM34
location: complement(join(2075447..2075545,2076063..2076189,2076809..2076953,2077225..2077385,2078056..2078208,2078735..2078834,2078940..2079063))
location: region:2075447-2079063:-1
so has part: feature:2078940-2079063:-1:exon
so has part: feature:2078735-2078834:-1:exon
so has part: feature:2078056-2078208:-1:exon
so has part: feature:2077225-2077385:-1:exon
so has part: feature:2076809-2076953:-1:exon
so has part: feature:2076063-2076189:-1:exon
so has part: feature:2075447-2075545:-1:exon

XP_032054499.1
type: Protein
SIO_000068: ncbiprotein

position:2075447:-1
position: 2075447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2079063:-1
position: 2079063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2078940-2079063:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2078735-2078834:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2078056-2078208:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2077225-2077385:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2076809-2076953:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2076063-2076189:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2075447-2075545:-1:exon

STK4
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: STK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2079186..2125307
location: region:2079186-2125307:1
so has part: feature:2079186-2125307:1:exon
subclass of: SO_0000010

116495676
type: Gene
SIO_000068: ncbigene

position:2079186:1
position: 2079186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2125307:1
position: 2125307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2079186-2125307:1:exon

STK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: STK4
product: serine/threonine kinase 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032198330.1
SIO_010081: STK4
subclass of: SO_0000673
so part of: STK4
location: join(2079186..2079258,2080958..2081038,2081875..2082003,2083936..2084050,2084625..2084789,2085189..2085356,2085921..2086058,2086671..2086799,2087240..2087293,2089127..2089313,2101536..2101693,2121958..2125307)
location: region:2079186-2125307:1
so has part: feature:2079186-2079258:1:exon
so has part: feature:2080958-2081038:1:exon
so has part: feature:2081875-2082003:1:exon
so has part: feature:2083936-2084050:1:exon
so has part: feature:2084625-2084789:1:exon
so has part: feature:2085189-2085356:1:exon
so has part: feature:2085921-2086058:1:exon
so has part: feature:2086671-2086799:1:exon
so has part: feature:2087240-2087293:1:exon
so has part: feature:2089127-2089313:1:exon
so has part: feature:2101536-2101693:1:exon
so has part: feature:2121958-2125307:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2079186-2079258:1:exon

position:2079258:1
position: 2079258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2080958-2081038:1:exon

position:2080958:1
position: 2080958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2081038:1
position: 2081038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2081875-2082003:1:exon

position:2081875:1
position: 2081875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2082003:1
position: 2082003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2083936-2084050:1:exon

position:2083936:1
position: 2083936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2084050:1
position: 2084050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2084625-2084789:1:exon

position:2084625:1
position: 2084625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2084789:1
position: 2084789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2085189-2085356:1:exon

position:2085189:1
position: 2085189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2085356:1
position: 2085356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:2086671-2086799:1:exon

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position:2086799:1
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urn:…
SIO_000300: 9
SIO_000628: feature:2087240-2087293:1:exon

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position:2087293:1
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urn:…
SIO_000300: 10
SIO_000628: feature:2089127-2089313:1:exon

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position:2089313:1
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urn:…
SIO_000300: 11
SIO_000628: feature:2101536-2101693:1:exon

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SIO_000300: 12
SIO_000628: feature:2121958-2125307:1:exon