Aythya fuligula isolate bAytFul2 chromosome 13, bAytFul2.pri, whole genome shotgun sequence.
type: Entry
definition: Aythya fuligula isolate bAytFul2 chromosome 13, bAytFul2.pri, whole genome shotgun sequence.
sequence version: NC_045571.1
sequence date: 2020-01-30
sequence: sequence
division: CON
label: NC_045571.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA602521
dblink: SAMN12621346
keyword: WGS
keyword: RefSeq
source: Aythya fuligula (tufted duck)
organism: Aythya fuligula
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Aythyinae; Aythya.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020312.1.\nAssembly name: bAytFul2.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/12/31. The original whole-genome shotgun project has the\naccession WNMM00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 20-SEP-2019\nAssembly Method :: FALCON v. 2018.31.08-03.06; FALCON-Unzip\n v. 6.0.0.47841; purge_haplotigs v.\n v1.0.3+ 1.Nov.2018; scaff10x v. 4.1.0;\n Bionano Solve DLS v. 3.2.1; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishing\n & gap filling v. 6.0.0.47841; longranger\n align v. 2.2.2; freebayes Illumina\n polishing v. 1.3; gEVAL manual curation\n v. 2019-09-20; VGP assembly pipeline\n individual v. 1.5\nAssembly Name :: bAytFul2.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 64.03x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Aythya fuligula Annotation Release\n 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 21228795
topology: linear
so has quality: SO_0000987
location: 1..21228795
location: region:1-21228795:1
RO_0002162: 219594

NC_045571
type: RefSeq
SIO_000068: refseq

PRJNA602521
type: BioProject
SIO_000068: bioproject

SAMN12621346
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21228795:1
position: 21228795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-21228795:1:source
so part of: sequence
organism: Aythya fuligula
mol type: genomic DNA
isolate: bAytFul2
chromosome: 13
sex: female
tissue type: lung (powdered)
dev stage: adult
country: Sweden
lat lon: 59.8509 N 17.6300 E
collection date: 28-Aug-2017
collected by: Patrik Ellstrom, Mahmoud Naguib, Josef Jarhult

219594
type: Taxonomy
SIO_000068: taxonomy

LOC116494382
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116494382
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2181..6249)
location: region:2181-6249:-1
so has part: feature:2181-6249:-1:exon
subclass of: SO_0000011

116494382
type: Gene
SIO_000068: ncbigene

position:2181:-1
position: 2181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6249:-1
position: 6249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2181-6249:-1:exon

LOC116494382
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116494382
product: uncharacterized LOC116494382, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004253856.1
SIO_010081: LOC116494382
subclass of: SO_0000673
so part of: LOC116494382
location: complement(join(2181..2207,5761..5897,5988..6034,6121..6249))
location: region:2181-6249:-1
so has part: feature:6121-6249:-1:exon
so has part: feature:5988-6034:-1:exon
so has part: feature:5761-5897:-1:exon
so has part: feature:2181-2207:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6121-6249:-1:exon

position:6121:-1
position: 6121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5988-6034:-1:exon

position:5988:-1
position: 5988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6034:-1
position: 6034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5761-5897:-1:exon

position:5761:-1
position: 5761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5897:-1
position: 5897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2181-2207:-1:exon

position:2207:-1
position: 2207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116494382
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116494382
product: uncharacterized LOC116494382, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004253855.1
SIO_010081: LOC116494382
subclass of: SO_0000673
so part of: LOC116494382
location: complement(join(2694..2719,5761..5897,5988..6034,6121..6249))
location: region:2694-6249:-1
so has part: feature:6121-6249:-1:exon
so has part: feature:5988-6034:-1:exon
so has part: feature:5761-5897:-1:exon
so has part: feature:2694-2719:-1:exon

position:2694:-1
position: 2694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6121-6249:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5988-6034:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5761-5897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2694-2719:-1:exon

position:2719:-1
position: 2719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116494382
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116494382
product: uncharacterized LOC116494382, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004253854.1
SIO_010081: LOC116494382
subclass of: SO_0000673
so part of: LOC116494382
location: complement(join(5591..5627,5761..5897,5988..6034,6121..6249))
location: region:5591-6249:-1
so has part: feature:6121-6249:-1:exon
so has part: feature:5988-6034:-1:exon
so has part: feature:5761-5897:-1:exon
so has part: feature:5591-5627:-1:exon

position:5591:-1
position: 5591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6121-6249:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5988-6034:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5761-5897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5591-5627:-1:exon

position:5627:-1
position: 5627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116494414
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116494414
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9751..15605)
location: region:9751-15605:-1
so has part: feature:9751-15605:-1:exon
subclass of: SO_0000011

116494414
type: Gene
SIO_000068: ncbigene

position:9751:-1
position: 9751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15605:-1
position: 15605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9751-15605:-1:exon

LOC116494414
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116494414
product: uncharacterized LOC116494414
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004253862.1
SIO_010081: LOC116494414
subclass of: SO_0000673
so part of: LOC116494414
location: complement(join(9751..9783,15063..15243,15519..15605))
location: region:9751-15605:-1
so has part: feature:15519-15605:-1:exon
so has part: feature:15063-15243:-1:exon
so has part: feature:9751-9783:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15519-15605:-1:exon

position:15519:-1
position: 15519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15063-15243:-1:exon

position:15063:-1
position: 15063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15243:-1
position: 15243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9751-9783:-1:exon

position:9783:-1
position: 9783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116494525
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116494525
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(17327..18105)
location: region:17327-18105:-1
so has part: feature:17327-18105:-1:exon
subclass of: SO_0000011

116494525
type: Gene
SIO_000068: ncbigene

position:17327:-1
position: 17327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18105:-1
position: 18105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17327-18105:-1:exon

LOC116494525
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116494525
product: uncharacterized LOC116494525
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004253881.1
SIO_010081: LOC116494525
subclass of: SO_0000673
so part of: LOC116494525
location: complement(join(17327..17341,17708..17749,18025..18105))
location: region:17327-18105:-1
so has part: feature:18025-18105:-1:exon
so has part: feature:17708-17749:-1:exon
so has part: feature:17327-17341:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18025-18105:-1:exon

position:18025:-1
position: 18025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17708-17749:-1:exon

position:17708:-1
position: 17708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17749:-1
position: 17749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:17327-17341:-1:exon

position:17341:-1
position: 17341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116494300
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116494300
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(39630..52593)
location: region:39630-52593:-1
so has part: feature:39630-52593:-1:exon
subclass of: SO_0000011

116494300
type: Gene
SIO_000068: ncbigene

position:39630:-1
position: 39630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52593:-1
position: 52593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39630-52593:-1:exon

LOC116494300
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116494300
product: uncharacterized LOC116494300, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004253848.1
SIO_010081: LOC116494300
subclass of: SO_0000673
so part of: LOC116494300
location: complement(join(39630..39659,44089..45330,45428..45481,45873..45933,47079..47219,48703..48794,49240..49375,49775..49875,49962..50028,50107..51707,52525..52593))
location: region:39630-52593:-1
so has part: feature:52525-52593:-1:exon
so has part: feature:50107-51707:-1:exon
so has part: feature:49962-50028:-1:exon
so has part: feature:49775-49875:-1:exon
so has part: feature:49240-49375:-1:exon
so has part: feature:48703-48794:-1:exon
so has part: feature:47079-47219:-1:exon
so has part: feature:45873-45933:-1:exon
so has part: feature:45428-45481:-1:exon
so has part: feature:44089-45330:-1:exon
so has part: feature:39630-39659:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52525-52593:-1:exon

position:52525:-1
position: 52525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:50107-51707:-1:exon

position:50107:-1
position: 50107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51707:-1
position: 51707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:49962-50028:-1:exon

position:49962:-1
position: 49962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50028:-1
position: 50028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:49775-49875:-1:exon

position:49775:-1
position: 49775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49875:-1
position: 49875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:49240-49375:-1:exon

position:49240:-1
position: 49240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49375:-1
position: 49375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:48703-48794:-1:exon

position:48703:-1
position: 48703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48794:-1
position: 48794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:47079-47219:-1:exon

position:47079:-1
position: 47079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47219:-1
position: 47219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:45873-45933:-1:exon

position:45873:-1
position: 45873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45933:-1
position: 45933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:45428-45481:-1:exon

position:45428:-1
position: 45428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45481:-1
position: 45481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:44089-45330:-1:exon

position:44089:-1
position: 44089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45330:-1
position: 45330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:39630-39659:-1:exon

position:39659:-1
position: 39659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116494300
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116494300
product: uncharacterized LOC116494300, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004253845.1
SIO_010081: LOC116494300
subclass of: SO_0000673
so part of: LOC116494300
location: complement(join(39630..39659,44089..45330,45428..45481,45873..45933,47079..47219,48703..48794,49240..49375,49775..49875,49962..50028,50107..51707,52451..52501))
location: region:39630-52501:-1
so has part: feature:52451-52501:-1:exon
so has part: feature:50107-51707:-1:exon
so has part: feature:49962-50028:-1:exon
so has part: feature:49775-49875:-1:exon
so has part: feature:49240-49375:-1:exon
so has part: feature:48703-48794:-1:exon
so has part: feature:47079-47219:-1:exon
so has part: feature:45873-45933:-1:exon
so has part: feature:45428-45481:-1:exon
so has part: feature:44089-45330:-1:exon
so has part: feature:39630-39659:-1:exon

position:52501:-1
position: 52501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52451-52501:-1:exon

position:52451:-1
position: 52451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:50107-51707:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49962-50028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:49775-49875:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:49240-49375:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:48703-48794:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:47079-47219:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:45873-45933:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:45428-45481:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:44089-45330:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:39630-39659:-1:exon

LOC116494300
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116494300
product: uncharacterized LOC116494300, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004253847.1
SIO_010081: LOC116494300
subclass of: SO_0000673
so part of: LOC116494300
location: complement(join(39630..39659,44089..45330,45428..45481,45873..45933,47079..47219,48703..48794,49240..49375,49775..49875,49962..50028,50107..51707,52378..52404))
location: region:39630-52404:-1
so has part: feature:52378-52404:-1:exon
so has part: feature:50107-51707:-1:exon
so has part: feature:49962-50028:-1:exon
so has part: feature:49775-49875:-1:exon
so has part: feature:49240-49375:-1:exon
so has part: feature:48703-48794:-1:exon
so has part: feature:47079-47219:-1:exon
so has part: feature:45873-45933:-1:exon
so has part: feature:45428-45481:-1:exon
so has part: feature:44089-45330:-1:exon
so has part: feature:39630-39659:-1:exon

position:52404:-1
position: 52404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52378-52404:-1:exon

position:52378:-1
position: 52378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:50107-51707:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49962-50028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:49775-49875:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:49240-49375:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:48703-48794:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:47079-47219:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:45873-45933:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:45428-45481:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:44089-45330:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:39630-39659:-1:exon

LOC116494300
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116494300
product: uncharacterized LOC116494300, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004253846.1
SIO_010081: LOC116494300
subclass of: SO_0000673
so part of: LOC116494300
location: complement(join(39630..39659,44089..45330,45428..45481,45873..45933,47079..47219,48703..48794,49240..49375,49775..49875,49962..50028,50107..51707,52107..52299))
location: region:39630-52299:-1
so has part: feature:52107-52299:-1:exon
so has part: feature:50107-51707:-1:exon
so has part: feature:49962-50028:-1:exon
so has part: feature:49775-49875:-1:exon
so has part: feature:49240-49375:-1:exon
so has part: feature:48703-48794:-1:exon
so has part: feature:47079-47219:-1:exon
so has part: feature:45873-45933:-1:exon
so has part: feature:45428-45481:-1:exon
so has part: feature:44089-45330:-1:exon
so has part: feature:39630-39659:-1:exon

position:52299:-1
position: 52299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52107-52299:-1:exon

position:52107:-1
position: 52107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:50107-51707:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49962-50028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:49775-49875:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:49240-49375:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:48703-48794:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:47079-47219:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:45873-45933:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:45428-45481:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:44089-45330:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:39630-39659:-1:exon

LOC116494300
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116494300
product: uncharacterized LOC116494300, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004253844.1
SIO_010081: LOC116494300
subclass of: SO_0000673
so part of: LOC116494300
location: complement(join(39630..39659,44089..45330,45428..45481,45873..45933,47079..47219,48703..48794,49240..49375,49775..49875,49962..50028,50107..51707,51838..52299))
location: region:39630-52299:-1
so has part: feature:51838-52299:-1:exon
so has part: feature:50107-51707:-1:exon
so has part: feature:49962-50028:-1:exon
so has part: feature:49775-49875:-1:exon
so has part: feature:49240-49375:-1:exon
so has part: feature:48703-48794:-1:exon
so has part: feature:47079-47219:-1:exon
so has part: feature:45873-45933:-1:exon
so has part: feature:45428-45481:-1:exon
so has part: feature:44089-45330:-1:exon
so has part: feature:39630-39659:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51838-52299:-1:exon

position:51838:-1
position: 51838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:50107-51707:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49962-50028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:49775-49875:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:49240-49375:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:48703-48794:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:47079-47219:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:45873-45933:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:45428-45481:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:44089-45330:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:39630-39659:-1:exon

LOC116494300
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116494300
product: uncharacterized LOC116494300, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004253849.1
SIO_010081: LOC116494300
subclass of: SO_0000673
so part of: LOC116494300
location: complement(join(39630..39659,44089..45330,45428..45481,45873..45933,47079..47219,49775..49875,49962..50028,50107..52299))
location: region:39630-52299:-1
so has part: feature:50107-52299:-1:exon
so has part: feature:49962-50028:-1:exon
so has part: feature:49775-49875:-1:exon
so has part: feature:47079-47219:-1:exon
so has part: feature:45873-45933:-1:exon
so has part: feature:45428-45481:-1:exon
so has part: feature:44089-45330:-1:exon
so has part: feature:39630-39659:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:50107-52299:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49962-50028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49775-49875:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47079-47219:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45873-45933:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:45428-45481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44089-45330:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:39630-39659:-1:exon

LOC116494300
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116494300
product: uncharacterized LOC116494300, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004253842.1
SIO_010081: LOC116494300
subclass of: SO_0000673
so part of: LOC116494300
location: complement(join(39630..39659,44089..45330,45428..45481,45873..45933,47079..47219,48703..48794,49775..49875,49962..50028,50107..52299))
location: region:39630-52299:-1
so has part: feature:50107-52299:-1:exon
so has part: feature:49962-50028:-1:exon
so has part: feature:49775-49875:-1:exon
so has part: feature:48703-48794:-1:exon
so has part: feature:47079-47219:-1:exon
so has part: feature:45873-45933:-1:exon
so has part: feature:45428-45481:-1:exon
so has part: feature:44089-45330:-1:exon
so has part: feature:39630-39659:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:50107-52299:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49962-50028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49775-49875:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48703-48794:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47079-47219:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:45873-45933:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:45428-45481:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:44089-45330:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:39630-39659:-1:exon

LOC116494300
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116494300
product: uncharacterized LOC116494300, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004253840.1
SIO_010081: LOC116494300
subclass of: SO_0000673
so part of: LOC116494300
location: complement(join(39630..39659,44089..45330,45428..45481,45873..45933,47079..47219,48703..48794,49240..49375,49775..49875,49962..50028,50107..52299))
location: region:39630-52299:-1
so has part: feature:50107-52299:-1:exon
so has part: feature:49962-50028:-1:exon
so has part: feature:49775-49875:-1:exon
so has part: feature:49240-49375:-1:exon
so has part: feature:48703-48794:-1:exon
so has part: feature:47079-47219:-1:exon
so has part: feature:45873-45933:-1:exon
so has part: feature:45428-45481:-1:exon
so has part: feature:44089-45330:-1:exon
so has part: feature:39630-39659:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:50107-52299:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49962-50028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49775-49875:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:49240-49375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48703-48794:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:47079-47219:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:45873-45933:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:45428-45481:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44089-45330:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:39630-39659:-1:exon

LOC116494300
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116494300
product: uncharacterized LOC116494300, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004253850.1
SIO_010081: LOC116494300
subclass of: SO_0000673
so part of: LOC116494300
location: complement(join(39630..39659,44089..45353,45428..45481,45873..45933,47079..47219,48703..48794,49240..49375,49775..49875,49962..50028,50107..52299))
location: region:39630-52299:-1
so has part: feature:50107-52299:-1:exon
so has part: feature:49962-50028:-1:exon
so has part: feature:49775-49875:-1:exon
so has part: feature:49240-49375:-1:exon
so has part: feature:48703-48794:-1:exon
so has part: feature:47079-47219:-1:exon
so has part: feature:45873-45933:-1:exon
so has part: feature:45428-45481:-1:exon
so has part: feature:44089-45353:-1:exon
so has part: feature:39630-39659:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:50107-52299:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49962-50028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49775-49875:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:49240-49375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48703-48794:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:47079-47219:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:45873-45933:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:45428-45481:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44089-45353:-1:exon

position:45353:-1
position: 45353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:39630-39659:-1:exon

LOC116494300
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116494300
product: uncharacterized LOC116494300, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004253843.1
SIO_010081: LOC116494300
subclass of: SO_0000673
so part of: LOC116494300
location: complement(join(39644..39659,43984..44006,44089..45330,45428..45481,45873..45933,47079..47219,48703..48794,49240..49375,49775..49875,49962..50028,50107..52299))
location: region:39644-52299:-1
so has part: feature:50107-52299:-1:exon
so has part: feature:49962-50028:-1:exon
so has part: feature:49775-49875:-1:exon
so has part: feature:49240-49375:-1:exon
so has part: feature:48703-48794:-1:exon
so has part: feature:47079-47219:-1:exon
so has part: feature:45873-45933:-1:exon
so has part: feature:45428-45481:-1:exon
so has part: feature:44089-45330:-1:exon
so has part: feature:43984-44006:-1:exon
so has part: feature:39644-39659:-1:exon

position:39644:-1
position: 39644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50107-52299:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49962-50028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49775-49875:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:49240-49375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48703-48794:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:47079-47219:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:45873-45933:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:45428-45481:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44089-45330:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:43984-44006:-1:exon

position:43984:-1
position: 43984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44006:-1
position: 44006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:39644-39659:-1:exon

LOC116494300
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116494300
product: uncharacterized LOC116494300, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004253841.1
SIO_010081: LOC116494300
subclass of: SO_0000673
so part of: LOC116494300
location: complement(join(43452..44006,44089..45330,45428..45481,45873..45933,47079..47219,48703..48794,49240..49375,49775..49875,49962..50028,50107..52299))
location: region:43452-52299:-1
so has part: feature:50107-52299:-1:exon
so has part: feature:49962-50028:-1:exon
so has part: feature:49775-49875:-1:exon
so has part: feature:49240-49375:-1:exon
so has part: feature:48703-48794:-1:exon
so has part: feature:47079-47219:-1:exon
so has part: feature:45873-45933:-1:exon
so has part: feature:45428-45481:-1:exon
so has part: feature:44089-45330:-1:exon
so has part: feature:43452-44006:-1:exon

position:43452:-1
position: 43452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50107-52299:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49962-50028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49775-49875:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:49240-49375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48703-48794:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:47079-47219:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:45873-45933:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:45428-45481:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44089-45330:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:43452-44006:-1:exon

LOC116494302
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116494302
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(54112..56247)
location: region:54112-56247:-1
so has part: feature:54112-56247:-1:exon
subclass of: SO_0000011

116494302
type: Gene
SIO_000068: ncbigene

position:54112:-1
position: 54112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56247:-1
position: 56247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54112-56247:-1:exon

LOC116494302
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116494302
product: uncharacterized LOC116494302
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004253851.1
SIO_010081: LOC116494302
subclass of: SO_0000673
so part of: LOC116494302
location: complement(join(54112..55042,55560..55758,56219..56247))
location: region:54112-56247:-1
so has part: feature:56219-56247:-1:exon
so has part: feature:55560-55758:-1:exon
so has part: feature:54112-55042:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:56219-56247:-1:exon

position:56219:-1
position: 56219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:55560-55758:-1:exon

position:55560:-1
position: 55560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55758:-1
position: 55758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:54112-55042:-1:exon

position:55042:-1
position: 55042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116494309
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116494309
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 77267..90866
location: region:77267-90866:1
so has part: feature:77267-90866:1:exon
subclass of: SO_0000010

116494309
type: Gene
SIO_000068: ncbigene

position:77267:1
position: 77267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90866:1
position: 90866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77267-90866:1:exon

LOC116494309
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116494309
product: GTPase-activating Rap/Ran-GAP domain-like protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 41% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032196130.1
SIO_010081: LOC116494309
subclass of: SO_0000673
so part of: LOC116494309
location: join(77267..77314,77515..77589,78592..78702,79414..79513,83825..83941,84647..84819,85117..85275,87234..87300,88910..89017,90123..90241,90666..90866)
location: region:77267-90866:1
so has part: feature:77267-77314:1:exon
so has part: feature:77515-77589:1:exon
so has part: feature:78592-78702:1:exon
so has part: feature:79414-79513:1:exon
so has part: feature:83825-83941:1:exon
so has part: feature:84647-84819:1:exon
so has part: feature:85117-85275:1:exon
so has part: feature:87234-87300:1:exon
so has part: feature:88910-89017:1:exon
so has part: feature:90123-90241:1:exon
so has part: feature:90666-90866:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:77267-77314:1:exon

position:77314:1
position: 77314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:77515-77589:1:exon

position:77515:1
position: 77515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77589:1
position: 77589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:78592-78702:1:exon

position:78592:1
position: 78592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78702:1
position: 78702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:79414-79513:1:exon

position:79414:1
position: 79414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79513:1
position: 79513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:83825-83941:1:exon

position:83825:1
position: 83825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83941:1
position: 83941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:84647-84819:1:exon

position:84647:1
position: 84647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84819:1
position: 84819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:85117-85275:1:exon

position:85117:1
position: 85117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85275:1
position: 85275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:87234-87300:1:exon

position:87234:1
position: 87234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87300:1
position: 87300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:88910-89017:1:exon

position:88910:1
position: 88910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89017:1
position: 89017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:90123-90241:1:exon

position:90123:1
position: 90123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90241:1
position: 90241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:90666-90866:1:exon

position:90666:1
position: 90666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116494309
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116494309
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:90173..90175,aa:OTHER)
product: LOW QUALITY PROTEIN: GTPase-activating Rap/Ran-GAP domain-like protein 3
translation: MLDTSYFELPFFFISYALKLKTTVKGDTSPTLATTSFCKKEPWESQSFCSNFPHEVVCADSWGQSLLVSTDAGILLIDDGQPSVQVFDKTLQIKQMHVLEALDLLIARTDKGKDSRLLVFRLSAVQKDIETKQMIRSKYDCRENKLERTKGCHLYAINTHHGSELRIVVGIQNKLLLITKKYNPCNSLTSSSLLSLPECPVDEFQYIWEICLSDPPVVMTLVDGPTGDSDVMICVAYQHQFDLVNESIGESYRLHHVEANKVNFVAAIDVYEDGEAGLLLCYNYVCQYRKVYPFNGGSPLVQSSSYDFHFSWNQVPYDVVCAFPSILAFTTDSIEIXLVVSGNLVHTAVVPELQLVASRSDIYFKATAAVRGSSHSSSKEMSSSSPQAPTAYEIPECPLSSSEGNVVSRLLEALIIIFSKMKSIR
SIO_010081: LOC116494309
subclass of: SO_0000673
so part of: LOC116494309
location: join(77267..77314,77515..77589,78592..78702,79414..79513,83825..83941,84647..84819,85117..85275,87234..87300,88910..89017,90123..90241,90666..90866)
location: region:77267-90866:1
so has part: feature:77267-77314:1:exon
so has part: feature:77515-77589:1:exon
so has part: feature:78592-78702:1:exon
so has part: feature:79414-79513:1:exon
so has part: feature:83825-83941:1:exon
so has part: feature:84647-84819:1:exon
so has part: feature:85117-85275:1:exon
so has part: feature:87234-87300:1:exon
so has part: feature:88910-89017:1:exon
so has part: feature:90123-90241:1:exon
so has part: feature:90666-90866:1:exon

XP_032052021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77267-77314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:77515-77589:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78592-78702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:79414-79513:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83825-83941:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84647-84819:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:85117-85275:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:87234-87300:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:88910-89017:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:90123-90241:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:90666-90866:1:exon

ZBTB33
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: ZBTB33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 135039..138906
location: region:135039-138906:1
so has part: feature:135039-138906:1:exon
subclass of: SO_0000010

116494496
type: Gene
SIO_000068: ncbigene

position:135039:1
position: 135039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138906:1
position: 138906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135039-138906:1:exon

ZBTB33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ZBTB33
product: zinc finger and BTB domain containing 33
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196412.1
SIO_010081: ZBTB33
subclass of: SO_0000673
so part of: ZBTB33
location: join(135039..135121,136351..138906)
location: region:135039-138906:1
so has part: feature:135039-135121:1:exon
so has part: feature:136351-138906:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:135039-135121:1:exon

position:135121:1
position: 135121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:136351-138906:1:exon

position:136351:1
position: 136351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZBTB33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: ZBTB33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional regulator Kaiso
translation: MEGEKLISATDTQYSNALLQSLNEQRGHGLFCDVTVIVEDRKFRAHRNILSASSTYFHQLFSVAGQVVELSFVRAEIFAEILNYMYSSKIISVRSDLLDELIKSGQLLGVKFIADLCIPPSEGKSSSNEVKDAASETSTSSPTQKDAETQVPAIRQESGDVLGGMPVITESFSLHGISYETAKITVSDSDDDDDVIFCSELVPPKECTKDTSAATHNQPCSNAAGVSDQKSCGSGGSPLLTSPTATQKLSSSANQLNAKQIQSSAESLVSATPQHLTPEIILLNRPPVNASPTVSSSNQTHVTPTINLVEENQKPSNNSSSAEMETTAVDDVEEMVEDDDDVISSSSPGSVSSSSLVQQPAASKTAASEGSGVQKKQVVTFSQEPSSKPGEFKIKISDVLTGNNREFSAGIAPKHVAEGQKIITLDTATEIEGLSTGCKVYANIGEDTYDIVIPVKDDPEEGEAKRDETPKTSGDDSPGRKRMKVKHDDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNVHSWEKKYPCRYCDKVFPLAEYRTKHEIHHTGERRYQCLTCGKSFINYQIMASHIRSVHSQDPSGDTKLYRLHPCRSLQIRQYAYITDRSNSIPVLNENGIVYRVDTGKEGTEGTTSNPPAKQMTWDDIFIPQGNEAIFKQNQSEGSTEFEFVIPESY
SIO_010081: ZBTB33
subclass of: SO_0000673
so part of: ZBTB33
location: 136353..138392
location: region:136353-138392:1
so has part: feature:136353-138392:1:exon

XP_032052303.1
type: Protein
SIO_000068: ncbiprotein

position:136353:1
position: 136353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138392:1
position: 138392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136353-138392:1:exon

TMEM255A
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TMEM255A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(141840..167528)
location: region:141840-167528:-1
so has part: feature:141840-167528:-1:exon
subclass of: SO_0000010

116494497
type: Gene
SIO_000068: ncbigene

position:141840:-1
position: 141840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167528:-1
position: 167528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141840-167528:-1:exon

TMEM255A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: TMEM255A
product: transmembrane protein 255A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196414.1
SIO_010081: TMEM255A
subclass of: SO_0000673
so part of: TMEM255A
location: complement(join(141840..144420,147820..147963,149273..149432,151517..151605,152584..152646,154326..154415,159037..159099,164017..164159,167422..167528))
location: region:141840-167528:-1
so has part: feature:167422-167528:-1:exon
so has part: feature:164017-164159:-1:exon
so has part: feature:159037-159099:-1:exon
so has part: feature:154326-154415:-1:exon
so has part: feature:152584-152646:-1:exon
so has part: feature:151517-151605:-1:exon
so has part: feature:149273-149432:-1:exon
so has part: feature:147820-147963:-1:exon
so has part: feature:141840-144420:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:167422-167528:-1:exon

position:167422:-1
position: 167422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:164017-164159:-1:exon

position:164017:-1
position: 164017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164159:-1
position: 164159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:159037-159099:-1:exon

position:159037:-1
position: 159037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159099:-1
position: 159099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:154326-154415:-1:exon

position:154326:-1
position: 154326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154415:-1
position: 154415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:152584-152646:-1:exon

position:152584:-1
position: 152584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152646:-1
position: 152646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:151517-151605:-1:exon

position:151517:-1
position: 151517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151605:-1
position: 151605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:149273-149432:-1:exon

position:149273:-1
position: 149273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149432:-1
position: 149432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:147820-147963:-1:exon

position:147820:-1
position: 147820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147963:-1
position: 147963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:141840-144420:-1:exon

position:144420:-1
position: 144420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM255A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: TMEM255A
product: transmembrane protein 255A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196413.1
SIO_010081: TMEM255A
subclass of: SO_0000673
so part of: TMEM255A
location: complement(join(141840..144420,147820..147963,149273..149435,151517..151605,152584..152646,154326..154415,159037..159099,164017..164159,167422..167526))
location: region:141840-167526:-1
so has part: feature:167422-167526:-1:exon
so has part: feature:164017-164159:-1:exon
so has part: feature:159037-159099:-1:exon
so has part: feature:154326-154415:-1:exon
so has part: feature:152584-152646:-1:exon
so has part: feature:151517-151605:-1:exon
so has part: feature:149273-149435:-1:exon
so has part: feature:147820-147963:-1:exon
so has part: feature:141840-144420:-1:exon

position:167526:-1
position: 167526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167422-167526:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:164017-164159:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:159037-159099:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:154326-154415:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:152584-152646:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151517-151605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:149273-149435:-1:exon

position:149435:-1
position: 149435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:147820-147963:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:141840-144420:-1:exon

TMEM255A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: TMEM255A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 255A isoform X2
translation: MRQALTQQRPGGIALPDSVGSFNRRKRNSLYVTVTLLIVSVLILTVGLAATTRTQNVTVGGYYPGVILGFGSFLGIIGSNLIENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDLRPLYAGRCQYYSKSTTLPEAICHPQRRAPCTPKIKTNTCFCCDLYNCGKVEISGGYYEYIDVSSCQDIIHLYHLLWSATILNIVGLFLGIITAAILGGFKDMTPSIPTLNCTVENAHPTVSYYSRPQVTSYNTYYHSTPHLPPYSAYDFQHSSMFPVSTPSGLSDDPQSVSPSPSYMWSSNAPPRYSPPYFPPFEKPPPYTP
SIO_010081: TMEM255A
subclass of: SO_0000673
so part of: TMEM255A
location: complement(join(144262..144420,147820..147963,149273..149432,151517..151605,152584..152646,154326..154415,159037..159099,164017..164159,167422..167479))
location: region:144262-167479:-1
so has part: feature:167422-167479:-1:exon
so has part: feature:164017-164159:-1:exon
so has part: feature:159037-159099:-1:exon
so has part: feature:154326-154415:-1:exon
so has part: feature:152584-152646:-1:exon
so has part: feature:151517-151605:-1:exon
so has part: feature:149273-149432:-1:exon
so has part: feature:147820-147963:-1:exon
so has part: feature:144262-144420:-1:exon

XP_032052305.1
type: Protein
SIO_000068: ncbiprotein

position:144262:-1
position: 144262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167479:-1
position: 167479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167422-167479:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:164017-164159:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:159037-159099:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:154326-154415:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:152584-152646:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151517-151605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:149273-149432:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:147820-147963:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:144262-144420:-1:exon

TMEM255A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: TMEM255A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 255A isoform X1
translation: MRQALTQQRPGGIALPDSVGSFNRRKRNSLYVTVTLLIVSVLILTVGLAATTRTQNVTVGGYYPGVILGFGSFLGIIGSNLIENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDLRPLYAGRCQYYSKSTTLPEAICHPQRRAPCTPKIKTNTCFCCDLYNCGNRVEISGGYYEYIDVSSCQDIIHLYHLLWSATILNIVGLFLGIITAAILGGFKDMTPSIPTLNCTVENAHPTVSYYSRPQVTSYNTYYHSTPHLPPYSAYDFQHSSMFPVSTPSGLSDDPQSVSPSPSYMWSSNAPPRYSPPYFPPFEKPPPYTP
SIO_010081: TMEM255A
subclass of: SO_0000673
so part of: TMEM255A
location: complement(join(144262..144420,147820..147963,149273..149435,151517..151605,152584..152646,154326..154415,159037..159099,164017..164159,167422..167479))
location: region:144262-167479:-1
so has part: feature:167422-167479:-1:exon
so has part: feature:164017-164159:-1:exon
so has part: feature:159037-159099:-1:exon
so has part: feature:154326-154415:-1:exon
so has part: feature:152584-152646:-1:exon
so has part: feature:151517-151605:-1:exon
so has part: feature:149273-149435:-1:exon
so has part: feature:147820-147963:-1:exon
so has part: feature:144262-144420:-1:exon

XP_032052304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167422-167479:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:164017-164159:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:159037-159099:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:154326-154415:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:152584-152646:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151517-151605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:149273-149435:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:147820-147963:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:144262-144420:-1:exon

ATP1B4
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: ATP1B4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 170118..177267
location: region:170118-177267:1
so has part: feature:170118-177267:1:exon
subclass of: SO_0000010

116494467
type: Gene
SIO_000068: ncbigene

position:170118:1
position: 170118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177267:1
position: 177267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170118-177267:1:exon

ATP1B4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ATP1B4
product: ATPase Na+/K+ transporting family member beta 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032196383.1
SIO_010081: ATP1B4
subclass of: SO_0000673
so part of: ATP1B4
location: join(170118..170156,171900..172062,173269..173397,174666..174770,174979..175175,175736..175792,176351..176446,177014..177267)
location: region:170118-177267:1
so has part: feature:170118-170156:1:exon
so has part: feature:171900-172062:1:exon
so has part: feature:173269-173397:1:exon
so has part: feature:174666-174770:1:exon
so has part: feature:174979-175175:1:exon
so has part: feature:175736-175792:1:exon
so has part: feature:176351-176446:1:exon
so has part: feature:177014-177267:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:170118-170156:1:exon

position:170156:1
position: 170156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:171900-172062:1:exon

position:171900:1
position: 171900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172062:1
position: 172062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:173269-173397:1:exon

position:173269:1
position: 173269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173397:1
position: 173397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:174666-174770:1:exon

position:174666:1
position: 174666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174770:1
position: 174770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:174979-175175:1:exon

position:174979:1
position: 174979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175175:1
position: 175175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:175736-175792:1:exon

position:175736:1
position: 175736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175792:1
position: 175792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:176351-176446:1:exon

position:176351:1
position: 176351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176446:1
position: 176446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:177014-177267:1:exon

position:177014:1
position: 177014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP1B4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: ATP1B4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ATP1B4
translation: MELNAASPGGKRLENKDEEKVQDLDTGEAETKAEMGNKTWADLAGEMKTFLWNPEERTCLGRTAKSWGLILLFYFVFYTCLAGMFAFCMYVMLLTLSPYTPTYRDHVAPPGVMIRPYLNGFTIAFNVSERSTWQPYVDSMHHFLAAYDDKVQEEKNIECISGQYFIQGGNESEEKKACQFKRSLLQNCSGIADQTFGYSRGQPCILLKMNRIIGYRPGAGVPVSVDCKVQKGNESDLGSVDFYPGNGTFDLMYYPYYGKITHVNYTSPLVAMHFTDVKRNSLVPIQCSLHGKGIVNDVNSDRFLGRIIFTLSIGK
SIO_010081: ATP1B4
subclass of: SO_0000673
so part of: ATP1B4
location: join(170118..170156,171900..172062,173269..173397,174666..174770,174979..175175,175736..175792,176351..176446,177014..177175)
location: region:170118-177175:1
so has part: feature:170118-170156:1:exon
so has part: feature:171900-172062:1:exon
so has part: feature:173269-173397:1:exon
so has part: feature:174666-174770:1:exon
so has part: feature:174979-175175:1:exon
so has part: feature:175736-175792:1:exon
so has part: feature:176351-176446:1:exon
so has part: feature:177014-177175:1:exon

XP_032052274.1
type: Protein
SIO_000068: ncbiprotein

position:177175:1
position: 177175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170118-170156:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:171900-172062:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:173269-173397:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:174666-174770:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:174979-175175:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:175736-175792:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:176351-176446:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:177014-177175:1:exon

LAMP2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LAMP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(182974..201359)
location: region:182974-201359:-1
so has part: feature:182974-201359:-1:exon
subclass of: SO_0000010

116494250
type: Gene
SIO_000068: ncbigene

position:182974:-1
position: 182974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201359:-1
position: 201359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182974-201359:-1:exon

LAMP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LAMP2
product: lysosomal associated membrane protein 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196000.1
SIO_010081: LAMP2
subclass of: SO_0000673
so part of: LAMP2
location: complement(join(182974..184381,189410..189577,190014..190089,190373..190492,191784..192001,192798..192959,193597..193811,194281..194401,201202..201359))
location: region:182974-201359:-1
so has part: feature:201202-201359:-1:exon
so has part: feature:194281-194401:-1:exon
so has part: feature:193597-193811:-1:exon
so has part: feature:192798-192959:-1:exon
so has part: feature:191784-192001:-1:exon
so has part: feature:190373-190492:-1:exon
so has part: feature:190014-190089:-1:exon
so has part: feature:189410-189577:-1:exon
so has part: feature:182974-184381:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:201202-201359:-1:exon

position:201202:-1
position: 201202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:194281-194401:-1:exon

position:194281:-1
position: 194281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194401:-1
position: 194401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:193597-193811:-1:exon

position:193597:-1
position: 193597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193811:-1
position: 193811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:192798-192959:-1:exon

position:192798:-1
position: 192798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192959:-1
position: 192959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:191784-192001:-1:exon

position:191784:-1
position: 191784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192001:-1
position: 192001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:190373-190492:-1:exon

position:190373:-1
position: 190373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190492:-1
position: 190492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:190014-190089:-1:exon

position:190014:-1
position: 190014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190089:-1
position: 190089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:189410-189577:-1:exon

position:189410:-1
position: 189410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189577:-1
position: 189577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:182974-184381:-1:exon

position:184381:-1
position: 184381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LAMP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LAMP2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: lysosome-associated membrane glycoprotein 2
translation: METCRGPAALHPLLPLLLLLGASGFLQSYAVESRCKDASNVTCLYAQWMMKFLIKYETNSSDYKNASLDLPSTVTHDGSVCGNDTQAALLAVQFGGGHSWSVNFTETNETYQADFIVFTYNTSDAAVFPDAKRKGLVTVVVKDSMHPIQLNNVFVCHHTTSFEAENVTQFFWNITMQPFVQNGTIGKTETRCHADTPTAAPTVVPTAANVTTTSTTTSSPAPTTAPKPVENPVTGNYSLKSGNKTCLLATVGLQLNVSQDKPLLININPKTTSTDGTCGNTSATLKLNDGNSTLIDFTFIVNASASVRKFYLKEVNVTLLNHLNGSVILNADNNNFSKWDAFLGNSYMCRKEQTLEINEDLQVHTFNLWVQPFLVKENKFAIAEDCSPEVDNFIVPIAVGAALGGLVVLVLMAYFFGHKKHRNAGYEQF
SIO_010081: LAMP2
subclass of: SO_0000673
so part of: LAMP2
location: complement(join(184239..184381,189410..189577,190014..190089,190373..190492,191784..192001,192798..192959,193597..193811,194281..194401,201202..201271))
location: region:184239-201271:-1
so has part: feature:201202-201271:-1:exon
so has part: feature:194281-194401:-1:exon
so has part: feature:193597-193811:-1:exon
so has part: feature:192798-192959:-1:exon
so has part: feature:191784-192001:-1:exon
so has part: feature:190373-190492:-1:exon
so has part: feature:190014-190089:-1:exon
so has part: feature:189410-189577:-1:exon
so has part: feature:184239-184381:-1:exon

XP_032051891.1
type: Protein
SIO_000068: ncbiprotein

position:184239:-1
position: 184239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201271:-1
position: 201271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201202-201271:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194281-194401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:193597-193811:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192798-192959:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:191784-192001:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:190373-190492:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:190014-190089:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:189410-189577:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:184239-184381:-1:exon

CUL4B
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: CUL4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(209045..232196)
location: region:209045-232196:-1
so has part: feature:209045-232196:-1:exon
subclass of: SO_0000010

116494274
type: Gene
SIO_000068: ncbigene

position:209045:-1
position: 209045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232196:-1
position: 232196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209045-232196:-1:exon

CUL4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: CUL4B
product: cullin 4B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196054.1
SIO_010081: CUL4B
subclass of: SO_0000673
so part of: CUL4B
location: complement(join(209045..212438,213608..213760,214274..214446,214524..214629,215201..215314,215467..215574,216431..216516,217252..217362,217665..217769,218053..218245,218796..218914,220054..220121,220729..220811,221082..221171,221263..221425,222363..222436,222936..223005,223933..224036,228391..228506,231048..232196))
location: region:209045-232196:-1
so has part: feature:231048-232196:-1:exon
so has part: feature:228391-228506:-1:exon
so has part: feature:223933-224036:-1:exon
so has part: feature:222936-223005:-1:exon
so has part: feature:222363-222436:-1:exon
so has part: feature:221263-221425:-1:exon
so has part: feature:221082-221171:-1:exon
so has part: feature:220729-220811:-1:exon
so has part: feature:220054-220121:-1:exon
so has part: feature:218796-218914:-1:exon
so has part: feature:218053-218245:-1:exon
so has part: feature:217665-217769:-1:exon
so has part: feature:217252-217362:-1:exon
so has part: feature:216431-216516:-1:exon
so has part: feature:215467-215574:-1:exon
so has part: feature:215201-215314:-1:exon
so has part: feature:214524-214629:-1:exon
so has part: feature:214274-214446:-1:exon
so has part: feature:213608-213760:-1:exon
so has part: feature:209045-212438:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:231048-232196:-1:exon

position:231048:-1
position: 231048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:228391-228506:-1:exon

position:228391:-1
position: 228391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228506:-1
position: 228506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:223933-224036:-1:exon

position:223933:-1
position: 223933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224036:-1
position: 224036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:222936-223005:-1:exon

position:222936:-1
position: 222936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223005:-1
position: 223005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:222363-222436:-1:exon

position:222363:-1
position: 222363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222436:-1
position: 222436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:221263-221425:-1:exon

position:221263:-1
position: 221263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221425:-1
position: 221425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:221082-221171:-1:exon

position:221082:-1
position: 221082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221171:-1
position: 221171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:220729-220811:-1:exon

position:220729:-1
position: 220729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220811:-1
position: 220811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:220054-220121:-1:exon

position:220054:-1
position: 220054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220121:-1
position: 220121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:218796-218914:-1:exon

position:218796:-1
position: 218796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218914:-1
position: 218914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:218053-218245:-1:exon

position:218053:-1
position: 218053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218245:-1
position: 218245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:217665-217769:-1:exon

position:217665:-1
position: 217665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217769:-1
position: 217769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:217252-217362:-1:exon

position:217252:-1
position: 217252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217362:-1
position: 217362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:216431-216516:-1:exon

position:216431:-1
position: 216431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216516:-1
position: 216516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:215467-215574:-1:exon

position:215467:-1
position: 215467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215574:-1
position: 215574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:215201-215314:-1:exon

position:215201:-1
position: 215201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215314:-1
position: 215314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:214524-214629:-1:exon

position:214524:-1
position: 214524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214629:-1
position: 214629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:214274-214446:-1:exon

position:214274:-1
position: 214274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214446:-1
position: 214446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:213608-213760:-1:exon

position:213608:-1
position: 213608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213760:-1
position: 213760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:209045-212438:-1:exon

position:212438:-1
position: 212438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CUL4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: CUL4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cullin-4B
translation: MFPTGFSSPNPPAAAQEVRPATDGNSSSSSSCKKRKLNNSSNSNSEREEFDSISSCSSSPSKTNSSSSSTVITTSSCSSSGVASSNHHLQKKLRFEDSLDFIGLDVKMAEESSSSSSPAASSQQQHQQQLKNKSLLISSVAVGHHANGLTKAASSTVSSFANSKPGSAKKLVIKNFKDKPKLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYKQLRQICEDHIKAQIHQFREDSLDSVLFLKKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRTHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFEHRFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEADRIITYLDQSTQKPLIATVEKQLLGEHLTAILQKGLNHLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDVCFLKNEKFVNAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKARVLTKSPKGKDVEDGDKFTCNDDFRHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENPNQYNYIA
SIO_010081: CUL4B
subclass of: SO_0000673
so part of: CUL4B
location: complement(join(212343..212438,213608..213760,214274..214446,214524..214629,215201..215314,215467..215574,216431..216516,217252..217362,217665..217769,218053..218245,218796..218914,220054..220121,220729..220811,221082..221171,221263..221425,222363..222436,222936..223005,223933..224036,228391..228506,231048..231579))
location: region:212343-231579:-1
so has part: feature:231048-231579:-1:exon
so has part: feature:228391-228506:-1:exon
so has part: feature:223933-224036:-1:exon
so has part: feature:222936-223005:-1:exon
so has part: feature:222363-222436:-1:exon
so has part: feature:221263-221425:-1:exon
so has part: feature:221082-221171:-1:exon
so has part: feature:220729-220811:-1:exon
so has part: feature:220054-220121:-1:exon
so has part: feature:218796-218914:-1:exon
so has part: feature:218053-218245:-1:exon
so has part: feature:217665-217769:-1:exon
so has part: feature:217252-217362:-1:exon
so has part: feature:216431-216516:-1:exon
so has part: feature:215467-215574:-1:exon
so has part: feature:215201-215314:-1:exon
so has part: feature:214524-214629:-1:exon
so has part: feature:214274-214446:-1:exon
so has part: feature:213608-213760:-1:exon
so has part: feature:212343-212438:-1:exon

XP_032051945.1
type: Protein
SIO_000068: ncbiprotein

position:212343:-1
position: 212343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231579:-1
position: 231579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231048-231579:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:228391-228506:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:223933-224036:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:222936-223005:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:222363-222436:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:221263-221425:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:221082-221171:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:220729-220811:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:220054-220121:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:218796-218914:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:218053-218245:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:217665-217769:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:217252-217362:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:216431-216516:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:215467-215574:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:215201-215314:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:214524-214629:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:214274-214446:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:213608-213760:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:212343-212438:-1:exon

MCTS1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: MCTS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 237697..245512
location: region:237697-245512:1
so has part: feature:237697-245512:1:exon
subclass of: SO_0000010

116494334
type: Gene
SIO_000068: ncbigene

position:237697:1
position: 237697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245512:1
position: 245512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237697-245512:1:exon

MCTS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: MCTS1
product: MCTS1 re-initiation and release factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196177.1
SIO_010081: MCTS1
subclass of: SO_0000673
so part of: MCTS1
location: join(237697..237845,238239..238391,239018..239115,240282..240415,241424..241491,243600..245512)
location: region:237697-245512:1
so has part: feature:237697-237845:1:exon
so has part: feature:238239-238391:1:exon
so has part: feature:239018-239115:1:exon
so has part: feature:240282-240415:1:exon
so has part: feature:241424-241491:1:exon
so has part: feature:243600-245512:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237697-237845:1:exon

position:237845:1
position: 237845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:238239-238391:1:exon

position:238239:1
position: 238239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238391:1
position: 238391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:239018-239115:1:exon

position:239018:1
position: 239018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239115:1
position: 239115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:240282-240415:1:exon

position:240282:1
position: 240282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240415:1
position: 240415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:241424-241491:1:exon

position:241424:1
position: 241424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241491:1
position: 241491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:243600-245512:1:exon

position:243600:1
position: 243600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MCTS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: MCTS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: malignant T-cell-amplified sequence 1
translation: MFKKFDEKENVSNCIQLKTSVIKGIKNQLLDQFPVIEPWLNQIMPKKDPVKIVRCHEHIEILTVNGELLFFRQREGIFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSPGAKLYPAAVDTVVAIMAEGKQHALCVGVMKMSAEDIEKVNKGIGIENIHYLNDGLWHMKTYK
SIO_010081: MCTS1
subclass of: SO_0000673
so part of: MCTS1
location: join(237835..237845,238239..238391,239018..239115,240282..240415,241424..241491,243600..243681)
location: region:237835-243681:1
so has part: feature:237835-237845:1:exon
so has part: feature:238239-238391:1:exon
so has part: feature:239018-239115:1:exon
so has part: feature:240282-240415:1:exon
so has part: feature:241424-241491:1:exon
so has part: feature:243600-243681:1:exon

XP_032052068.1
type: Protein
SIO_000068: ncbiprotein

position:237835:1
position: 237835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243681:1
position: 243681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237835-237845:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:238239-238391:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:239018-239115:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240282-240415:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:241424-241491:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:243600-243681:1:exon

C1GALT1C1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: C1GALT1C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(246602..248284)
location: region:246602-248284:-1
so has part: feature:246602-248284:-1:exon
subclass of: SO_0000010

116494333
type: Gene
SIO_000068: ncbigene

position:246602:-1
position: 246602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248284:-1
position: 248284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246602-248284:-1:exon

C1GALT1C1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: C1GALT1C1
product: C1GALT1 specific chaperone 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196176.1
SIO_010081: C1GALT1C1
subclass of: SO_0000673
so part of: C1GALT1C1
location: complement(join(246602..247972,248227..248284))
location: region:246602-248284:-1
so has part: feature:248227-248284:-1:exon
so has part: feature:246602-247972:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:248227-248284:-1:exon

position:248227:-1
position: 248227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:246602-247972:-1:exon

position:247972:-1
position: 247972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C1GALT1C1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: C1GALT1C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C1GALT1-specific chaperone 1
translation: MVSESSSFIKGVVLGGVFCMLVTLLGHFKMGHGTRAHHHEHHHIQAPNKEDVLNLSEDERLELSQSIRVFCIILVKPKDLGHWAAVKETWSKHCDKAEFYSSENIKVFNSVVLDTNDMWMMMRKAYKLTYERYKDEFNWFFLAYPTTFAIIENLKYFLLKKDPAQPFYIGHTVKSGDLEYVDSEGGIVLSIGSLRRLSRIFEDTDKCPEQGGMIWKLSEDKQLAVCLKYTGVIAENAEDSEGKDIFNTKSVNTLIKEAMANHPEQVVDGCCSDMAITFNGLTPNHMHVMMYGVYRLRPYGHTYNDALIFLPPEGSDND
SIO_010081: C1GALT1C1
subclass of: SO_0000673
so part of: C1GALT1C1
location: complement(247011..247967)
location: region:247011-247967:-1
so has part: feature:247011-247967:-1:exon

XP_032052067.1
type: Protein
SIO_000068: ncbiprotein

position:247011:-1
position: 247011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247967:-1
position: 247967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247011-247967:-1:exon

LOC116494264
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116494264
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 280668..299277
location: region:280668-299277:1
so has part: feature:280668-299277:1:exon
subclass of: SO_0000011

116494264
type: Gene
SIO_000068: ncbigene

position:280668:1
position: 280668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299277:1
position: 299277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280668-299277:1:exon

LOC116494264
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116494264
product: uncharacterized LOC116494264
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004253839.1
SIO_010081: LOC116494264
subclass of: SO_0000673
so part of: LOC116494264
location: join(280668..280734,291347..291352,299267..299277)
location: region:280668-299277:1
so has part: feature:280668-280734:1:exon
so has part: feature:291347-291352:1:exon
so has part: feature:299267-299277:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:280668-280734:1:exon

position:280734:1
position: 280734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:291347-291352:1:exon

position:291347:1
position: 291347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291352:1
position: 291352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:299267-299277:1:exon

position:299267:1
position: 299267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GRIA3
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: GRIA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 825818..984266
location: region:825818-984266:1
so has part: feature:825818-984266:1:exon
subclass of: SO_0000010

116494251
type: Gene
SIO_000068: ncbigene

position:825818:1
position: 825818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:984266:1
position: 984266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825818-984266:1:exon

GRIA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: GRIA3
product: glutamate ionotropic receptor AMPA type subunit 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 55 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196007.1
SIO_010081: GRIA3
subclass of: SO_0000673
so part of: GRIA3
location: join(825818..826082,826776..826934,861269..861508,898035..898222,922796..922849,924347..924508,928409..928576,930184..930288,931577..931684,932751..932957,942829..943205,952098..952296,967132..967379,967940..968054,982925..983172,984027..984266)
location: region:825818-984266:1
so has part: feature:825818-826082:1:exon
so has part: feature:826776-826934:1:exon
so has part: feature:861269-861508:1:exon
so has part: feature:898035-898222:1:exon
so has part: feature:922796-922849:1:exon
so has part: feature:924347-924508:1:exon
so has part: feature:928409-928576:1:exon
so has part: feature:930184-930288:1:exon
so has part: feature:931577-931684:1:exon
so has part: feature:932751-932957:1:exon
so has part: feature:942829-943205:1:exon
so has part: feature:952098-952296:1:exon
so has part: feature:967132-967379:1:exon
so has part: feature:967940-968054:1:exon
so has part: feature:982925-983172:1:exon
so has part: feature:984027-984266:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:825818-826082:1:exon

position:826082:1
position: 826082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:826776-826934:1:exon

position:826776:1
position: 826776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:826934:1
position: 826934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:861269-861508:1:exon

position:861269:1
position: 861269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:861508:1
position: 861508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:898035-898222:1:exon

position:898035:1
position: 898035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898222:1
position: 898222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:922796-922849:1:exon

position:922796:1
position: 922796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:922849:1
position: 922849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:924347-924508:1:exon

position:924347:1
position: 924347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924508:1
position: 924508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:928409-928576:1:exon

position:928409:1
position: 928409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:928576:1
position: 928576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:930184-930288:1:exon

position:930184:1
position: 930184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:930288:1
position: 930288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:931577-931684:1:exon

position:931577:1
position: 931577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:931684:1
position: 931684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:932751-932957:1:exon

position:932751:1
position: 932751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:932957:1
position: 932957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:942829-943205:1:exon

position:942829:1
position: 942829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:943205:1
position: 943205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:952098-952296:1:exon

position:952098:1
position: 952098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952296:1
position: 952296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:967132-967379:1:exon

position:967132:1
position: 967132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967379:1
position: 967379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:967940-968054:1:exon

position:967940:1
position: 967940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:968054:1
position: 968054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:982925-983172:1:exon

position:982925:1
position: 982925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983172:1
position: 983172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:984027-984266:1:exon

position:984027:1
position: 984027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GRIA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: GRIA3
product: glutamate ionotropic receptor AMPA type subunit 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 53 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196006.1
SIO_010081: GRIA3
subclass of: SO_0000673
so part of: GRIA3
location: join(825818..826082,826776..826934,861269..861508,898035..898222,922796..922849,924347..924508,928409..928576,930184..930288,931577..931684,932751..932957,942829..943205,952098..952296,967132..967379,980820..980934,982925..983172,984027..984266)
location: region:825818-984266:1
so has part: feature:825818-826082:1:exon
so has part: feature:826776-826934:1:exon
so has part: feature:861269-861508:1:exon
so has part: feature:898035-898222:1:exon
so has part: feature:922796-922849:1:exon
so has part: feature:924347-924508:1:exon
so has part: feature:928409-928576:1:exon
so has part: feature:930184-930288:1:exon
so has part: feature:931577-931684:1:exon
so has part: feature:932751-932957:1:exon
so has part: feature:942829-943205:1:exon
so has part: feature:952098-952296:1:exon
so has part: feature:967132-967379:1:exon
so has part: feature:980820-980934:1:exon
so has part: feature:982925-983172:1:exon
so has part: feature:984027-984266:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:825818-826082:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:826776-826934:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:861269-861508:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:898035-898222:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:922796-922849:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:924347-924508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:928409-928576:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:930184-930288:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:931577-931684:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:932751-932957:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:942829-943205:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:952098-952296:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:967132-967379:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:980820-980934:1:exon

position:980820:1
position: 980820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980934:1
position: 980934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:982925-983172:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:984027-984266:1:exon

GRIA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: GRIA3
product: glutamate ionotropic receptor AMPA type subunit 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196005.1
SIO_010081: GRIA3
subclass of: SO_0000673
so part of: GRIA3
location: join(825918..826082,826776..826934,861269..861508,898035..898222,922796..922849,924347..924508,928409..928576,930184..930288,931577..931684,932751..932957,942829..943205,952098..952296,982925..983172,984027..984266)
location: region:825918-984266:1
so has part: feature:825918-826082:1:exon
so has part: feature:826776-826934:1:exon
so has part: feature:861269-861508:1:exon
so has part: feature:898035-898222:1:exon
so has part: feature:922796-922849:1:exon
so has part: feature:924347-924508:1:exon
so has part: feature:928409-928576:1:exon
so has part: feature:930184-930288:1:exon
so has part: feature:931577-931684:1:exon
so has part: feature:932751-932957:1:exon
so has part: feature:942829-943205:1:exon
so has part: feature:952098-952296:1:exon
so has part: feature:982925-983172:1:exon
so has part: feature:984027-984266:1:exon

position:825918:1
position: 825918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825918-826082:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:826776-826934:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:861269-861508:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:898035-898222:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:922796-922849:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:924347-924508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:928409-928576:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:930184-930288:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:931577-931684:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:932751-932957:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:942829-943205:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:952098-952296:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:982925-983172:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:984027-984266:1:exon

GRIA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: GRIA3
product: glutamate ionotropic receptor AMPA type subunit 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196002.1
SIO_010081: GRIA3
subclass of: SO_0000673
so part of: GRIA3
location: join(825918..826082,826776..826934,861269..861508,898035..898222,922796..922849,924347..924508,928409..928576,930184..930288,931577..931684,932751..932957,942829..943205,952098..952296,967132..967379,967940..968054,980820..980916)
location: region:825918-980916:1
so has part: feature:825918-826082:1:exon
so has part: feature:826776-826934:1:exon
so has part: feature:861269-861508:1:exon
so has part: feature:898035-898222:1:exon
so has part: feature:922796-922849:1:exon
so has part: feature:924347-924508:1:exon
so has part: feature:928409-928576:1:exon
so has part: feature:930184-930288:1:exon
so has part: feature:931577-931684:1:exon
so has part: feature:932751-932957:1:exon
so has part: feature:942829-943205:1:exon
so has part: feature:952098-952296:1:exon
so has part: feature:967132-967379:1:exon
so has part: feature:967940-968054:1:exon
so has part: feature:980820-980916:1:exon

position:980916:1
position: 980916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825918-826082:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:826776-826934:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:861269-861508:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:898035-898222:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:922796-922849:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:924347-924508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:928409-928576:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:930184-930288:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:931577-931684:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:932751-932957:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:942829-943205:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:952098-952296:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:967132-967379:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:967940-968054:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:980820-980916:1:exon

GRIA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: GRIA3
product: glutamate ionotropic receptor AMPA type subunit 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196004.1
SIO_010081: GRIA3
subclass of: SO_0000673
so part of: GRIA3
location: join(825918..826082,826776..826934,861269..861508,898035..898222,922796..922849,924347..924508,928409..928576,930184..930288,931577..931684,932751..932957,942829..943205,952098..952296,967132..967379,973540..980746)
location: region:825918-980746:1
so has part: feature:825918-826082:1:exon
so has part: feature:826776-826934:1:exon
so has part: feature:861269-861508:1:exon
so has part: feature:898035-898222:1:exon
so has part: feature:922796-922849:1:exon
so has part: feature:924347-924508:1:exon
so has part: feature:928409-928576:1:exon
so has part: feature:930184-930288:1:exon
so has part: feature:931577-931684:1:exon
so has part: feature:932751-932957:1:exon
so has part: feature:942829-943205:1:exon
so has part: feature:952098-952296:1:exon
so has part: feature:967132-967379:1:exon
so has part: feature:973540-980746:1:exon

position:980746:1
position: 980746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825918-826082:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:826776-826934:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:861269-861508:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:898035-898222:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:922796-922849:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:924347-924508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:928409-928576:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:930184-930288:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:931577-931684:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:932751-932957:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:942829-943205:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:952098-952296:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:967132-967379:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:973540-980746:1:exon

position:973540:1
position: 973540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GRIA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: GRIA3
product: glutamate ionotropic receptor AMPA type subunit 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032196003.1
SIO_010081: GRIA3
subclass of: SO_0000673
so part of: GRIA3
location: join(825918..826082,826776..826934,861269..861508,898035..898222,922796..922849,924347..924508,928409..928576,930184..930288,931577..931684,932751..932957,942829..943205,952098..952296,967132..967379,967940..968054,973540..973633)
location: region:825918-973633:1
so has part: feature:825918-826082:1:exon
so has part: feature:826776-826934:1:exon
so has part: feature:861269-861508:1:exon
so has part: feature:898035-898222:1:exon
so has part: feature:922796-922849:1:exon
so has part: feature:924347-924508:1:exon
so has part: feature:928409-928576:1:exon
so has part: feature:930184-930288:1:exon
so has part: feature:931577-931684:1:exon
so has part: feature:932751-932957:1:exon
so has part: feature:942829-943205:1:exon
so has part: feature:952098-952296:1:exon
so has part: feature:967132-967379:1:exon
so has part: feature:967940-968054:1:exon
so has part: feature:973540-973633:1:exon

position:973633:1
position: 973633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825918-826082:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:826776-826934:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:861269-861508:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:898035-898222:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:922796-922849:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:924347-924508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:928409-928576:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:930184-930288:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:931577-931684:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:932751-932957:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:942829-943205:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:952098-952296:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:967132-967379:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:967940-968054:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:973540-973633:1:exon

GRIA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: GRIA3
product: glutamate ionotropic receptor AMPA type subunit 3, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196008.1
SIO_010081: GRIA3
subclass of: SO_0000673
so part of: GRIA3
location: join(825918..826082,826776..826934,861269..861508,898035..898222,922796..922849,924347..924508,928409..928576,930184..930288,931577..931684,932751..932957,942829..943205,952098..952296,955691..958082)
location: region:825918-958082:1
so has part: feature:825918-826082:1:exon
so has part: feature:826776-826934:1:exon
so has part: feature:861269-861508:1:exon
so has part: feature:898035-898222:1:exon
so has part: feature:922796-922849:1:exon
so has part: feature:924347-924508:1:exon
so has part: feature:928409-928576:1:exon
so has part: feature:930184-930288:1:exon
so has part: feature:931577-931684:1:exon
so has part: feature:932751-932957:1:exon
so has part: feature:942829-943205:1:exon
so has part: feature:952098-952296:1:exon
so has part: feature:955691-958082:1:exon

position:958082:1
position: 958082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825918-826082:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:826776-826934:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:861269-861508:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:898035-898222:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:922796-922849:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:924347-924508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:928409-928576:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:930184-930288:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:931577-931684:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:932751-932957:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:942829-943205:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:952098-952296:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:955691-958082:1:exon

position:955691:1
position: 955691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GRIA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: GRIA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor 3 isoform X7
translation: MGQSLPRTLLLLLLLAGLLGEARGGFPNTISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQFSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFVIQMRPALKGAILSLLTHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQVTARSVGSIKDVQEFRRIIEEMDRRQEKRYLIDCEVDRINTILEQVVILGKHSRGYHYMLANLGFTDIVLERVMHGGANVTGFQIVNNENPMVQQFLQRWVRLDEREFPEAKNSPLKYTSALTHDAVLVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNIQFDTYGRRTNYTIDVYEMKAAGSRKAGYWNEYERFVPALDQLPSNDTSSVENRTIVVTTILESPYVMYKKNHEQLEGNERYEGYCVDLASEIAKHVGIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHLEDSTEEPRDPQNPPDPPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMMVALIEFCYKSRAESKRMKLTKNTQNFKPAPATNTQNYATYREGYNVYGTESVKI
SIO_010081: GRIA3
subclass of: SO_0000673
so part of: GRIA3
location: join(825986..826082,826776..826934,861269..861508,898035..898222,922796..922849,924347..924508,928409..928576,930184..930288,931577..931684,932751..932957,942829..943205,952098..952296,967132..967379,967940..968054,982925..983170)
location: region:825986-983170:1
so has part: feature:825986-826082:1:exon
so has part: feature:826776-826934:1:exon
so has part: feature:861269-861508:1:exon
so has part: feature:898035-898222:1:exon
so has part: feature:922796-922849:1:exon
so has part: feature:924347-924508:1:exon
so has part: feature:928409-928576:1:exon
so has part: feature:930184-930288:1:exon
so has part: feature:931577-931684:1:exon
so has part: feature:932751-932957:1:exon
so has part: feature:942829-943205:1:exon
so has part: feature:952098-952296:1:exon
so has part: feature:967132-967379:1:exon
so has part: feature:967940-968054:1:exon
so has part: feature:982925-983170:1:exon

XP_032051898.1
type: Protein
SIO_000068: ncbiprotein

position:825986:1
position: 825986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983170:1
position: 983170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825986-826082:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:826776-826934:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:861269-861508:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:898035-898222:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:922796-922849:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:924347-924508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:928409-928576:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:930184-930288:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:931577-931684:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:932751-932957:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:942829-943205:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:952098-952296:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:967132-967379:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:967940-968054:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:982925-983170:1:exon

GRIA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: GRIA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor 3 isoform X6
translation: MGQSLPRTLLLLLLLAGLLGEARGGFPNTISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQFSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFVIQMRPALKGAILSLLTHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQVTARSVGSIKDVQEFRRIIEEMDRRQEKRYLIDCEVDRINTILEQVVILGKHSRGYHYMLANLGFTDIVLERVMHGGANVTGFQIVNNENPMVQQFLQRWVRLDEREFPEAKNSPLKYTSALTHDAVLVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNIQFDTYGRRTNYTIDVYEMKAAGSRKAGYWNEYERFVPALDQLPSNDTSSVENRTIVVTTILESPYVMYKKNHEQLEGNERYEGYCVDLASEIAKHVGIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHLEDSTEEPRDPQNPPDPPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTPVNLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSNVAGVFYILVGGLGLAMMVALIEFCYKSRAESKRMKLTKNTQNFKPAPATNTQNYATYREGYNVYGTESVKI
SIO_010081: GRIA3
subclass of: SO_0000673
so part of: GRIA3
location: join(825986..826082,826776..826934,861269..861508,898035..898222,922796..922849,924347..924508,928409..928576,930184..930288,931577..931684,932751..932957,942829..943205,952098..952296,967132..967379,980820..980934,982925..983170)
location: region:825986-983170:1
so has part: feature:825986-826082:1:exon
so has part: feature:826776-826934:1:exon
so has part: feature:861269-861508:1:exon
so has part: feature:898035-898222:1:exon
so has part: feature:922796-922849:1:exon
so has part: feature:924347-924508:1:exon
so has part: feature:928409-928576:1:exon
so has part: feature:930184-930288:1:exon
so has part: feature:931577-931684:1:exon
so has part: feature:932751-932957:1:exon
so has part: feature:942829-943205:1:exon
so has part: feature:952098-952296:1:exon
so has part: feature:967132-967379:1:exon
so has part: feature:980820-980934:1:exon
so has part: feature:982925-983170:1:exon

XP_032051897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:825986-826082:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:826776-826934:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:861269-861508:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:898035-898222:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:922796-922849:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:924347-924508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:928409-928576:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:930184-930288:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:931577-931684:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:932751-932957:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:942829-943205:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:952098-952296:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:967132-967379:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:980820-980934:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:982925-983170:1:exon

GRIA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: GRIA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor 3 isoform X5
translation: MGQSLPRTLLLLLLLAGLLGEARGGFPNTISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQFSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFVIQMRPALKGAILSLLTHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQVTARSVGSIKDVQEFRRIIEEMDRRQEKRYLIDCEVDRINTILEQVVILGKHSRGYHYMLANLGFTDIVLERVMHGGANVTGFQIVNNENPMVQQFLQRWVRLDEREFPEAKNSPLKYTSALTHDAVLVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNIQFDTYGRRTNYTIDVYEMKAAGSRKAGYWNEYERFVPALDQLPSNDTSSVENRTIVVTTILESPYVMYKKNHEQLEGNERYEGYCVDLASEIAKHVGIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHLEDSTEEPRDPQNPPDPPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRDKTSALSLSNVAGVFYILVGGLGLAMMVALIEFCYKSRAESKRMKLTKNTQNFKPAPATNTQNYATYREGYNVYGTESVKI
SIO_010081: GRIA3
subclass of: SO_0000673
so part of: GRIA3
location: join(825986..826082,826776..826934,861269..861508,898035..898222,922796..922849,924347..924508,928409..928576,930184..930288,931577..931684,932751..932957,942829..943205,952098..952296,982925..983170)
location: region:825986-983170:1
so has part: feature:825986-826082:1:exon
so has part: feature:826776-826934:1:exon
so has part: feature:861269-861508:1:exon
so has part: feature:898035-898222:1:exon
so has part: feature:922796-922849:1:exon
so has part: feature:924347-924508:1:exon
so has part: feature:928409-928576:1:exon
so has part: feature:930184-930288:1:exon
so has part: feature:931577-931684:1:exon
so has part: feature:932751-932957:1:exon
so has part: feature:942829-943205:1:exon
so has part: feature:952098-952296:1:exon
so has part: feature:982925-983170:1:exon

XP_032051896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:825986-826082:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:826776-826934:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:861269-861508:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:898035-898222:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:922796-922849:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:924347-924508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:928409-928576:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:930184-930288:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:931577-931684:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:932751-932957:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:942829-943205:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:952098-952296:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:982925-983170:1:exon

GRIA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: GRIA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor 3 isoform X2
translation: MGQSLPRTLLLLLLLAGLLGEARGGFPNTISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQFSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFVIQMRPALKGAILSLLTHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQVTARSVGSIKDVQEFRRIIEEMDRRQEKRYLIDCEVDRINTILEQVVILGKHSRGYHYMLANLGFTDIVLERVMHGGANVTGFQIVNNENPMVQQFLQRWVRLDEREFPEAKNSPLKYTSALTHDAVLVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNIQFDTYGRRTNYTIDVYEMKAAGSRKAGYWNEYERFVPALDQLPSNDTSSVENRTIVVTTILESPYVMYKKNHEQLEGNERYEGYCVDLASEIAKHVGIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHLEDSTEEPRDPQNPPDPPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKNSCKPCSIETQ
SIO_010081: GRIA3
subclass of: SO_0000673
so part of: GRIA3
location: join(825986..826082,826776..826934,861269..861508,898035..898222,922796..922849,924347..924508,928409..928576,930184..930288,931577..931684,932751..932957,942829..943205,952098..952296,967132..967379,967940..968054,980820..980855)
location: region:825986-980855:1
so has part: feature:825986-826082:1:exon
so has part: feature:826776-826934:1:exon
so has part: feature:861269-861508:1:exon
so has part: feature:898035-898222:1:exon
so has part: feature:922796-922849:1:exon
so has part: feature:924347-924508:1:exon
so has part: feature:928409-928576:1:exon
so has part: feature:930184-930288:1:exon
so has part: feature:931577-931684:1:exon
so has part: feature:932751-932957:1:exon
so has part: feature:942829-943205:1:exon
so has part: feature:952098-952296:1:exon
so has part: feature:967132-967379:1:exon
so has part: feature:967940-968054:1:exon
so has part: feature:980820-980855:1:exon

XP_032051893.1
type: Protein
SIO_000068: ncbiprotein

position:980855:1
position: 980855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825986-826082:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:826776-826934:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:861269-861508:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:898035-898222:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:922796-922849:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:924347-924508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:928409-928576:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:930184-930288:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:931577-931684:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:932751-932957:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:942829-943205:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:952098-952296:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:967132-967379:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:967940-968054:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:980820-980855:1:exon

GRIA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: GRIA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor 3 isoform X4
translation: MGQSLPRTLLLLLLLAGLLGEARGGFPNTISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQFSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFVIQMRPALKGAILSLLTHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQVTARSVGSIKDVQEFRRIIEEMDRRQEKRYLIDCEVDRINTILEQVVILGKHSRGYHYMLANLGFTDIVLERVMHGGANVTGFQIVNNENPMVQQFLQRWVRLDEREFPEAKNSPLKYTSALTHDAVLVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNIQFDTYGRRTNYTIDVYEMKAAGSRKAGYWNEYERFVPALDQLPSNDTSSVENRTIVVTTILESPYVMYKKNHEQLEGNERYEGYCVDLASEIAKHVGIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHLEDSTEEPRDPQNPPDPPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRLGRIRKPRKGPQCCWRHCGPERDVKHPPSCC
SIO_010081: GRIA3
subclass of: SO_0000673
so part of: GRIA3
location: join(825986..826082,826776..826934,861269..861508,898035..898222,922796..922849,924347..924508,928409..928576,930184..930288,931577..931684,932751..932957,942829..943205,952098..952296,967132..967379,973540..973636)
location: region:825986-973636:1
so has part: feature:825986-826082:1:exon
so has part: feature:826776-826934:1:exon
so has part: feature:861269-861508:1:exon
so has part: feature:898035-898222:1:exon
so has part: feature:922796-922849:1:exon
so has part: feature:924347-924508:1:exon
so has part: feature:928409-928576:1:exon
so has part: feature:930184-930288:1:exon
so has part: feature:931577-931684:1:exon
so has part: feature:932751-932957:1:exon
so has part: feature:942829-943205:1:exon
so has part: feature:952098-952296:1:exon
so has part: feature:967132-967379:1:exon
so has part: feature:973540-973636:1:exon

XP_032051895.1
type: Protein
SIO_000068: ncbiprotein

position:973636:1
position: 973636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825986-826082:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:826776-826934:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:861269-861508:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:898035-898222:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:922796-922849:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:924347-924508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:928409-928576:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:930184-930288:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:931577-931684:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:932751-932957:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:942829-943205:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:952098-952296:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:967132-967379:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:973540-973636:1:exon

GRIA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: GRIA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor 3 isoform X3
translation: MGQSLPRTLLLLLLLAGLLGEARGGFPNTISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQFSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFVIQMRPALKGAILSLLTHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQVTARSVGSIKDVQEFRRIIEEMDRRQEKRYLIDCEVDRINTILEQVVILGKHSRGYHYMLANLGFTDIVLERVMHGGANVTGFQIVNNENPMVQQFLQRWVRLDEREFPEAKNSPLKYTSALTHDAVLVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNIQFDTYGRRTNYTIDVYEMKAAGSRKAGYWNEYERFVPALDQLPSNDTSSVENRTIVVTTILESPYVMYKKNHEQLEGNERYEGYCVDLASEIAKHVGIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHLEDSTEEPRDPQNPPDPPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKARKDP
SIO_010081: GRIA3
subclass of: SO_0000673
so part of: GRIA3
location: join(825986..826082,826776..826934,861269..861508,898035..898222,922796..922849,924347..924508,928409..928576,930184..930288,931577..931684,932751..932957,942829..943205,952098..952296,967132..967379,967940..968054,973540..973557)
location: region:825986-973557:1
so has part: feature:825986-826082:1:exon
so has part: feature:826776-826934:1:exon
so has part: feature:861269-861508:1:exon
so has part: feature:898035-898222:1:exon
so has part: feature:922796-922849:1:exon
so has part: feature:924347-924508:1:exon
so has part: feature:928409-928576:1:exon
so has part: feature:930184-930288:1:exon
so has part: feature:931577-931684:1:exon
so has part: feature:932751-932957:1:exon
so has part: feature:942829-943205:1:exon
so has part: feature:952098-952296:1:exon
so has part: feature:967132-967379:1:exon
so has part: feature:967940-968054:1:exon
so has part: feature:973540-973557:1:exon

XP_032051894.1
type: Protein
SIO_000068: ncbiprotein

position:973557:1
position: 973557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825986-826082:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:826776-826934:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:861269-861508:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:898035-898222:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:922796-922849:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:924347-924508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:928409-928576:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:930184-930288:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:931577-931684:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:932751-932957:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:942829-943205:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:952098-952296:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:967132-967379:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:967940-968054:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:973540-973557:1:exon

GRIA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: GRIA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor 3 isoform X8
translation: MGQSLPRTLLLLLLLAGLLGEARGGFPNTISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQFSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFVIQMRPALKGAILSLLTHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQVTARSVGSIKDVQEFRRIIEEMDRRQEKRYLIDCEVDRINTILEQVVILGKHSRGYHYMLANLGFTDIVLERVMHGGANVTGFQIVNNENPMVQQFLQRWVRLDEREFPEAKNSPLKYTSALTHDAVLVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNIQFDTYGRRTNYTIDVYEMKAAGSRKAGYWNEYERFVPALDQLPSNDTSSVENRTIVVTTILESPYVMYKKNHEQLEGNERYEGYCVDLASEIAKHVGIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHLEDSTEEPRDPQNPPDPPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRCGYLSTWNWTDTSPSFHMNRW
SIO_010081: GRIA3
subclass of: SO_0000673
so part of: GRIA3
location: join(825986..826082,826776..826934,861269..861508,898035..898222,922796..922849,924347..924508,928409..928576,930184..930288,931577..931684,932751..932957,942829..943205,952098..952296,955691..955756)
location: region:825986-955756:1
so has part: feature:825986-826082:1:exon
so has part: feature:826776-826934:1:exon
so has part: feature:861269-861508:1:exon
so has part: feature:898035-898222:1:exon
so has part: feature:922796-922849:1:exon
so has part: feature:924347-924508:1:exon
so has part: feature:928409-928576:1:exon
so has part: feature:930184-930288:1:exon
so has part: feature:931577-931684:1:exon
so has part: feature:932751-932957:1:exon
so has part: feature:942829-943205:1:exon
so has part: feature:952098-952296:1:exon
so has part: feature:955691-955756:1:exon

XP_032051899.1
type: Protein
SIO_000068: ncbiprotein

position:955756:1
position: 955756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825986-826082:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:826776-826934:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:861269-861508:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:898035-898222:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:922796-922849:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:924347-924508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:928409-928576:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:930184-930288:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:931577-931684:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:932751-932957:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:942829-943205:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:952098-952296:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:955691-955756:1:exon

GRIA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: GRIA3
product: glutamate ionotropic receptor AMPA type subunit 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032196001.1
SIO_010081: GRIA3
subclass of: SO_0000673
so part of: GRIA3
location: join(826661..826683,826776..826934,861269..861508,898035..898222,922796..922849,924347..924508,928409..928576,930184..930288,931577..931684,932751..932957,942829..943205,952098..952296,967132..967379,980820..980934,982925..983172,984027..984266)
location: region:826661-984266:1
so has part: feature:826661-826683:1:exon
so has part: feature:826776-826934:1:exon
so has part: feature:861269-861508:1:exon
so has part: feature:898035-898222:1:exon
so has part: feature:922796-922849:1:exon
so has part: feature:924347-924508:1:exon
so has part: feature:928409-928576:1:exon
so has part: feature:930184-930288:1:exon
so has part: feature:931577-931684:1:exon
so has part: feature:932751-932957:1:exon
so has part: feature:942829-943205:1:exon
so has part: feature:952098-952296:1:exon
so has part: feature:967132-967379:1:exon
so has part: feature:980820-980934:1:exon
so has part: feature:982925-983172:1:exon
so has part: feature:984027-984266:1:exon

position:826661:1
position: 826661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:826661-826683:1:exon

position:826683:1
position: 826683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:826776-826934:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:861269-861508:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:898035-898222:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:922796-922849:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:924347-924508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:928409-928576:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:930184-930288:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:931577-931684:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:932751-932957:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:942829-943205:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:952098-952296:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:967132-967379:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:980820-980934:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:982925-983172:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:984027-984266:1:exon

GRIA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: GRIA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor 3 isoform X1
translation: MRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQFSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFVIQMRPALKGAILSLLTHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQVTARSVGSIKDVQEFRRIIEEMDRRQEKRYLIDCEVDRINTILEQVVILGKHSRGYHYMLANLGFTDIVLERVMHGGANVTGFQIVNNENPMVQQFLQRWVRLDEREFPEAKNSPLKYTSALTHDAVLVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNIQFDTYGRRTNYTIDVYEMKAAGSRKAGYWNEYERFVPALDQLPSNDTSSVENRTIVVTTILESPYVMYKKNHEQLEGNERYEGYCVDLASEIAKHVGIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHLEDSTEEPRDPQNPPDPPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTPVNLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSNVAGVFYILVGGLGLAMMVALIEFCYKSRAESKRMKLTKNTQNFKPAPATNTQNYATYREGYNVYGTESVKI
SIO_010081: GRIA3
subclass of: SO_0000673
so part of: GRIA3
location: join(826787..826934,861269..861508,898035..898222,922796..922849,924347..924508,928409..928576,930184..930288,931577..931684,932751..932957,942829..943205,952098..952296,967132..967379,980820..980934,982925..983170)
location: region:826787-983170:1
so has part: feature:826787-826934:1:exon
so has part: feature:861269-861508:1:exon
so has part: feature:898035-898222:1:exon
so has part: feature:922796-922849:1:exon
so has part: feature:924347-924508:1:exon
so has part: feature:928409-928576:1:exon
so has part: feature:930184-930288:1:exon
so has part: feature:931577-931684:1:exon
so has part: feature:932751-932957:1:exon
so has part: feature:942829-943205:1:exon
so has part: feature:952098-952296:1:exon
so has part: feature:967132-967379:1:exon
so has part: feature:980820-980934:1:exon
so has part: feature:982925-983170:1:exon

XP_032051892.1
type: Protein
SIO_000068: ncbiprotein

position:826787:1
position: 826787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:826787-826934:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:861269-861508:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:898035-898222:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:922796-922849:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:924347-924508:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:928409-928576:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:930184-930288:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:931577-931684:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:932751-932957:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:942829-943205:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:952098-952296:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:967132-967379:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:980820-980934:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:982925-983170:1:exon

THOC2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: THOC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(993560..1047141)
location: region:993560-1047141:-1
so has part: feature:993560-1047141:-1:exon
subclass of: SO_0000010

116494438
type: Gene
SIO_000068: ncbigene

position:993560:-1
position: 993560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1047141:-1
position: 1047141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:993560-1047141:-1:exon

THOC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: THOC2
product: THO complex 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196336.1
SIO_010081: THOC2
subclass of: SO_0000673
so part of: THOC2
location: complement(join(993560..994423,996637..996684,996800..996876,997530..997687,997768..997837,998181..998318,1001441..1001476,1002986..1003044,1003888..1004324,1004661..1004763,1005036..1005220,1005952..1006136,1006216..1006347,1006850..1006978,1008335..1008492,1010594..1010735,1011641..1011916,1012246..1012410,1012988..1013167,1013971..1014088,1015890..1015986,1016242..1016322,1016771..1016864,1017638..1017722,1019365..1019466,1019554..1019684,1021537..1021578,1024688..1024883,1025023..1025195,1028314..1028469,1030333..1030425,1031038..1031204,1032829..1032962,1033791..1033912,1035675..1035745,1037908..1037959,1038980..1039071,1041227..1041285,1047037..1047141))
location: region:993560-1047141:-1
so has part: feature:1047037-1047141:-1:exon
so has part: feature:1041227-1041285:-1:exon
so has part: feature:1038980-1039071:-1:exon
so has part: feature:1037908-1037959:-1:exon
so has part: feature:1035675-1035745:-1:exon
so has part: feature:1033791-1033912:-1:exon
so has part: feature:1032829-1032962:-1:exon
so has part: feature:1031038-1031204:-1:exon
so has part: feature:1030333-1030425:-1:exon
so has part: feature:1028314-1028469:-1:exon
so has part: feature:1025023-1025195:-1:exon
so has part: feature:1024688-1024883:-1:exon
so has part: feature:1021537-1021578:-1:exon
so has part: feature:1019554-1019684:-1:exon
so has part: feature:1019365-1019466:-1:exon
so has part: feature:1017638-1017722:-1:exon
so has part: feature:1016771-1016864:-1:exon
so has part: feature:1016242-1016322:-1:exon
so has part: feature:1015890-1015986:-1:exon
so has part: feature:1013971-1014088:-1:exon
so has part: feature:1012988-1013167:-1:exon
so has part: feature:1012246-1012410:-1:exon
so has part: feature:1011641-1011916:-1:exon
so has part: feature:1010594-1010735:-1:exon
so has part: feature:1008335-1008492:-1:exon
so has part: feature:1006850-1006978:-1:exon
so has part: feature:1006216-1006347:-1:exon
so has part: feature:1005952-1006136:-1:exon
so has part: feature:1005036-1005220:-1:exon
so has part: feature:1004661-1004763:-1:exon
so has part: feature:1003888-1004324:-1:exon
so has part: feature:1002986-1003044:-1:exon
so has part: feature:1001441-1001476:-1:exon
so has part: feature:998181-998318:-1:exon
so has part: feature:997768-997837:-1:exon
so has part: feature:997530-997687:-1:exon
so has part: feature:996800-996876:-1:exon
so has part: feature:996637-996684:-1:exon
so has part: feature:993560-994423:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1047037-1047141:-1:exon

position:1047037:-1
position: 1047037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1041227-1041285:-1:exon

position:1041227:-1
position: 1041227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1041285:-1
position: 1041285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1038980-1039071:-1:exon

position:1038980:-1
position: 1038980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1039071:-1
position: 1039071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1037908-1037959:-1:exon

position:1037908:-1
position: 1037908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1037959:-1
position: 1037959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1035675-1035745:-1:exon

position:1035675:-1
position: 1035675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1035745:-1
position: 1035745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1033791-1033912:-1:exon

position:1033791:-1
position: 1033791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1033912:-1
position: 1033912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1032829-1032962:-1:exon

position:1032829:-1
position: 1032829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1032962:-1
position: 1032962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1031038-1031204:-1:exon

position:1031038:-1
position: 1031038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1031204:-1
position: 1031204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1030333-1030425:-1:exon

position:1030333:-1
position: 1030333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1030425:-1
position: 1030425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1028314-1028469:-1:exon

position:1028314:-1
position: 1028314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1028469:-1
position: 1028469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1025023-1025195:-1:exon

position:1025023:-1
position: 1025023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025195:-1
position: 1025195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1024688-1024883:-1:exon

position:1024688:-1
position: 1024688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1024883:-1
position: 1024883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1021537-1021578:-1:exon

position:1021537:-1
position: 1021537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021578:-1
position: 1021578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1019554-1019684:-1:exon

position:1019554:-1
position: 1019554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019684:-1
position: 1019684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1019365-1019466:-1:exon

position:1019365:-1
position: 1019365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019466:-1
position: 1019466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1017638-1017722:-1:exon

position:1017638:-1
position: 1017638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1017722:-1
position: 1017722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1016771-1016864:-1:exon

position:1016771:-1
position: 1016771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1016864:-1
position: 1016864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1016242-1016322:-1:exon

position:1016242:-1
position: 1016242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1016322:-1
position: 1016322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1015890-1015986:-1:exon

position:1015890:-1
position: 1015890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1015986:-1
position: 1015986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1013971-1014088:-1:exon

position:1013971:-1
position: 1013971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1014088:-1
position: 1014088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1012988-1013167:-1:exon

position:1012988:-1
position: 1012988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1013167:-1
position: 1013167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1012246-1012410:-1:exon

position:1012246:-1
position: 1012246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1012410:-1
position: 1012410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1011641-1011916:-1:exon

position:1011641:-1
position: 1011641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1011916:-1
position: 1011916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1010594-1010735:-1:exon

position:1010594:-1
position: 1010594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1010735:-1
position: 1010735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1008335-1008492:-1:exon

position:1008335:-1
position: 1008335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1008492:-1
position: 1008492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1006850-1006978:-1:exon

position:1006850:-1
position: 1006850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1006978:-1
position: 1006978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1006216-1006347:-1:exon

position:1006216:-1
position: 1006216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1006347:-1
position: 1006347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1005952-1006136:-1:exon

position:1005952:-1
position: 1005952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1006136:-1
position: 1006136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1005036-1005220:-1:exon

position:1005036:-1
position: 1005036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1005220:-1
position: 1005220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1004661-1004763:-1:exon

position:1004661:-1
position: 1004661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1004763:-1
position: 1004763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1003888-1004324:-1:exon

position:1003888:-1
position: 1003888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1004324:-1
position: 1004324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1002986-1003044:-1:exon

position:1002986:-1
position: 1002986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003044:-1
position: 1003044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1001441-1001476:-1:exon

position:1001441:-1
position: 1001441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1001476:-1
position: 1001476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:998181-998318:-1:exon

position:998181:-1
position: 998181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998318:-1
position: 998318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:997768-997837:-1:exon

position:997768:-1
position: 997768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:997837:-1
position: 997837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:997530-997687:-1:exon

position:997530:-1
position: 997530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:997687:-1
position: 997687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:996800-996876:-1:exon

position:996800:-1
position: 996800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996876:-1
position: 996876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:996637-996684:-1:exon

position:996637:-1
position: 996637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996684:-1
position: 996684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:993560-994423:-1:exon

position:994423:-1
position: 994423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

THOC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: THOC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: THO complex subunit 2
translation: MAAALPAEWIKNWEKAGKNEFLQLCRTLSENKSHDNVGFRDIQQVLYELAYHVIRGNLKHDQASNVLGDVIELREDMPSILADVFCILDIETSCLEEKSKRDHFTQLVLACLYLVSDTVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLSGNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQTLCHILGFKFKFYQDPSGETPPSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKREIVEAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWQHAQSIMDQMPPFYATSHKPIAIALCQLVHVTIEPLYRRVGVPKGAKGSPISSLPNKRAPKQADSFEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEFQSDGSKQEDREKMEILFSCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQHKVHKYITSCELVMAPVHDAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHSSYDREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRATGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPFMIPENEFHHKDPPARNAVAATVQNGPGGAGMPTSLTINTAKLEESTTEETEKLKEKSQGAVKVINKAVNATPKMTTSNGNSASNSKIIKEKDDKEKSGKEKDKEKKEKITAATPETKALGKDGKDKPKEERANKDDKAREIKEKTPKSDKEKEKAKKEEKASKEEKSKTVVTTVESKSAAEKEREKEPSREKDVVKDMKSKEMTKGGEKIPVAGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSSTVKDNLNELKDSSAKHYINHTTPTLSKSKEREVDKKDLDKSRERSREREKKEEKDRKDRKRDHSNSDREVPQDSTKRRKEENGTTGSSKHSKSESPSDSPRSNEKEKEKSKSKSSGKEKGDSIKAEKMEKSSSGSKKESRHDKEKTEKKEKRESAGGKEEKKHHKSSDKHR
SIO_010081: THOC2
subclass of: SO_0000673
so part of: THOC2
location: complement(join(996657..996684,996800..996876,997530..997687,997768..997837,998181..998318,1001441..1001476,1002986..1003044,1003888..1004324,1004661..1004763,1005036..1005220,1005952..1006136,1006216..1006347,1006850..1006978,1008335..1008492,1010594..1010735,1011641..1011916,1012246..1012410,1012988..1013167,1013971..1014088,1015890..1015986,1016242..1016322,1016771..1016864,1017638..1017722,1019365..1019466,1019554..1019684,1021537..1021578,1024688..1024883,1025023..1025195,1028314..1028469,1030333..1030425,1031038..1031204,1032829..1032962,1033791..1033912,1035675..1035745,1037908..1037959,1038980..1039071,1041227..1041285,1047037..1047098))
location: region:996657-1047098:-1
so has part: feature:1047037-1047098:-1:exon
so has part: feature:1041227-1041285:-1:exon
so has part: feature:1038980-1039071:-1:exon
so has part: feature:1037908-1037959:-1:exon
so has part: feature:1035675-1035745:-1:exon
so has part: feature:1033791-1033912:-1:exon
so has part: feature:1032829-1032962:-1:exon
so has part: feature:1031038-1031204:-1:exon
so has part: feature:1030333-1030425:-1:exon
so has part: feature:1028314-1028469:-1:exon
so has part: feature:1025023-1025195:-1:exon
so has part: feature:1024688-1024883:-1:exon
so has part: feature:1021537-1021578:-1:exon
so has part: feature:1019554-1019684:-1:exon
so has part: feature:1019365-1019466:-1:exon
so has part: feature:1017638-1017722:-1:exon
so has part: feature:1016771-1016864:-1:exon
so has part: feature:1016242-1016322:-1:exon
so has part: feature:1015890-1015986:-1:exon
so has part: feature:1013971-1014088:-1:exon
so has part: feature:1012988-1013167:-1:exon
so has part: feature:1012246-1012410:-1:exon
so has part: feature:1011641-1011916:-1:exon
so has part: feature:1010594-1010735:-1:exon
so has part: feature:1008335-1008492:-1:exon
so has part: feature:1006850-1006978:-1:exon
so has part: feature:1006216-1006347:-1:exon
so has part: feature:1005952-1006136:-1:exon
so has part: feature:1005036-1005220:-1:exon
so has part: feature:1004661-1004763:-1:exon
so has part: feature:1003888-1004324:-1:exon
so has part: feature:1002986-1003044:-1:exon
so has part: feature:1001441-1001476:-1:exon
so has part: feature:998181-998318:-1:exon
so has part: feature:997768-997837:-1:exon
so has part: feature:997530-997687:-1:exon
so has part: feature:996800-996876:-1:exon
so has part: feature:996657-996684:-1:exon

XP_032052227.1
type: Protein
SIO_000068: ncbiprotein

position:996657:-1
position: 996657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1047098:-1
position: 1047098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1047037-1047098:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1041227-1041285:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1038980-1039071:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1037908-1037959:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1035675-1035745:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1033791-1033912:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1032829-1032962:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1031038-1031204:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1030333-1030425:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1028314-1028469:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1025023-1025195:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1024688-1024883:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1021537-1021578:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1019554-1019684:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1019365-1019466:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1017638-1017722:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1016771-1016864:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1016242-1016322:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1015890-1015986:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1013971-1014088:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1012988-1013167:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1012246-1012410:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1011641-1011916:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1010594-1010735:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1008335-1008492:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1006850-1006978:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1006216-1006347:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1005952-1006136:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1005036-1005220:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1004661-1004763:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1003888-1004324:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1002986-1003044:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1001441-1001476:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:998181-998318:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:997768-997837:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:997530-997687:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:996800-996876:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:996657-996684:-1:exon

XIAP
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: XIAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1063672..1088586
location: region:1063672-1088586:1
so has part: feature:1063672-1088586:1:exon
subclass of: SO_0000010

116494556
type: Gene
SIO_000068: ncbigene

position:1063672:1
position: 1063672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1088586:1
position: 1088586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1063672-1088586:1:exon

XIAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: XIAP
product: X-linked inhibitor of apoptosis
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196482.1
SIO_010081: XIAP
subclass of: SO_0000673
so part of: XIAP
location: join(1063672..1063725,1078009..1078915,1080367..1080466,1082249..1082327,1082968..1083001,1084210..1084410,1085867..1088586)
location: region:1063672-1088586:1
so has part: feature:1063672-1063725:1:exon
so has part: feature:1078009-1078915:1:exon
so has part: feature:1080367-1080466:1:exon
so has part: feature:1082249-1082327:1:exon
so has part: feature:1082968-1083001:1:exon
so has part: feature:1084210-1084410:1:exon
so has part: feature:1085867-1088586:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1063672-1063725:1:exon

position:1063725:1
position: 1063725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1078009-1078915:1:exon

position:1078009:1
position: 1078009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1078915:1
position: 1078915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1080367-1080466:1:exon

position:1080367:1
position: 1080367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1080466:1
position: 1080466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1082249-1082327:1:exon

position:1082249:1
position: 1082249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1082327:1
position: 1082327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1082968-1083001:1:exon

position:1082968:1
position: 1082968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1083001:1
position: 1083001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1084210-1084410:1:exon

position:1084210:1
position: 1084210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1084410:1
position: 1084410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1085867-1088586:1:exon

position:1085867:1
position: 1085867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

XIAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: XIAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase XIAP
translation: MTCNGPGNSEPHATPGTDYDQDWAQEHHRLGSFAEFPLDCLVSASALAQAGFVYTGEGCKVKCFSCHVTIEGWQPGDSAVERHKNLSPNCKFITESTFLENDLRPLAQNYQHRAENGSSNSVLLPALDDSPELEADYLLRTRQVVDMSDILYPKNPAMCSEEARLKSFHNWPSYGLLAPKELASAGLYYTGVGDQVACFCCGGKLKNWEPSDRAWSEHKRHYPRCYFVLGRDVGNVPSESIPAELGRNGLNDEQHPRNPSMAEYERRIQTFLNWIYPVNKEQLAEAGFYSIGNGDHVVCFHCGGGLQEWKENEDPWDQHAKWFPGCRFVREEKGLEFINNVHLGGGCRDSTIEAAEVTVLPKDDHLQNHLVQNAIHMGFSLSEIKSIMQKKLQMSGASYTSVEDLVADLISAQKENLKEEIPNENPLDQDLSMEEKLRRLQEEKLCKICMAKDISVVLIPCGHLVACKECAEAVNVCPLCCTNILKRQKIFMY
SIO_010081: XIAP
subclass of: SO_0000673
so part of: XIAP
location: join(1078042..1078915,1080367..1080466,1082249..1082327,1082968..1083001,1084210..1084410,1085867..1086060)
location: region:1078042-1086060:1
so has part: feature:1078042-1078915:1:exon
so has part: feature:1080367-1080466:1:exon
so has part: feature:1082249-1082327:1:exon
so has part: feature:1082968-1083001:1:exon
so has part: feature:1084210-1084410:1:exon
so has part: feature:1085867-1086060:1:exon

XP_032052373.1
type: Protein
SIO_000068: ncbiprotein

position:1078042:1
position: 1078042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1086060:1
position: 1086060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1078042-1078915:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1080367-1080466:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1082249-1082327:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1082968-1083001:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1084210-1084410:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1085867-1086060:1:exon

STAG2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: STAG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1096983..1171329
location: region:1096983-1171329:1
so has part: feature:1096983-1171329:1:exon
subclass of: SO_0000010

116494273
type: Gene
SIO_000068: ncbigene

position:1096983:1
position: 1096983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1171329:1
position: 1171329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1096983-1171329:1:exon

STAG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: STAG2
product: stromal antigen 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196052.1
SIO_010081: STAG2
subclass of: SO_0000673
so part of: STAG2
location: join(1096983..1097168,1132042..1132186,1133942..1134020,1134701..1134862,1137331..1137427,1138737..1138813,1140326..1140530,1142657..1142808,1145086..1145159,1145277..1145400,1146549..1146647,1146752..1146831,1147344..1147451,1148228..1148339,1149252..1149369,1150062..1150165,1151047..1151139,1151351..1151440,1152460..1152663,1154122..1154192,1154539..1154626,1154726..1154806,1157183..1157275,1159883..1160057,1160499..1160638,1161739..1161840,1163690..1163838,1164381..1164509,1164859..1165064,1165481..1165670,1165754..1165867,1166934..1167060,1167393..1167470,1170314..1171329)
location: region:1096983-1171329:1
so has part: feature:1096983-1097168:1:exon
so has part: feature:1132042-1132186:1:exon
so has part: feature:1133942-1134020:1:exon
so has part: feature:1134701-1134862:1:exon
so has part: feature:1137331-1137427:1:exon
so has part: feature:1138737-1138813:1:exon
so has part: feature:1140326-1140530:1:exon
so has part: feature:1142657-1142808:1:exon
so has part: feature:1145086-1145159:1:exon
so has part: feature:1145277-1145400:1:exon
so has part: feature:1146549-1146647:1:exon
so has part: feature:1146752-1146831:1:exon
so has part: feature:1147344-1147451:1:exon
so has part: feature:1148228-1148339:1:exon
so has part: feature:1149252-1149369:1:exon
so has part: feature:1150062-1150165:1:exon
so has part: feature:1151047-1151139:1:exon
so has part: feature:1151351-1151440:1:exon
so has part: feature:1152460-1152663:1:exon
so has part: feature:1154122-1154192:1:exon
so has part: feature:1154539-1154626:1:exon
so has part: feature:1154726-1154806:1:exon
so has part: feature:1157183-1157275:1:exon
so has part: feature:1159883-1160057:1:exon
so has part: feature:1160499-1160638:1:exon
so has part: feature:1161739-1161840:1:exon
so has part: feature:1163690-1163838:1:exon
so has part: feature:1164381-1164509:1:exon
so has part: feature:1164859-1165064:1:exon
so has part: feature:1165481-1165670:1:exon
so has part: feature:1165754-1165867:1:exon
so has part: feature:1166934-1167060:1:exon
so has part: feature:1167393-1167470:1:exon
so has part: feature:1170314-1171329:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1096983-1097168:1:exon

position:1097168:1
position: 1097168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1132042-1132186:1:exon

position:1132042:1
position: 1132042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132186:1
position: 1132186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1133942-1134020:1:exon

position:1133942:1
position: 1133942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1134020:1
position: 1134020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1134701-1134862:1:exon

position:1134701:1
position: 1134701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1134862:1
position: 1134862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1137331-1137427:1:exon

position:1137331:1
position: 1137331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1137427:1
position: 1137427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1138737-1138813:1:exon

position:1138737:1
position: 1138737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1138813:1
position: 1138813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1140326-1140530:1:exon

position:1140326:1
position: 1140326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1140530:1
position: 1140530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1142657-1142808:1:exon

position:1142657:1
position: 1142657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1142808:1
position: 1142808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1145086-1145159:1:exon

position:1145086:1
position: 1145086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1145159:1
position: 1145159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1145277-1145400:1:exon

position:1145277:1
position: 1145277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1145400:1
position: 1145400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1146549-1146647:1:exon

position:1146549:1
position: 1146549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1146647:1
position: 1146647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1146752-1146831:1:exon

position:1146752:1
position: 1146752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1146831:1
position: 1146831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1147344-1147451:1:exon

position:1147344:1
position: 1147344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1147451:1
position: 1147451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1148228-1148339:1:exon

position:1148228:1
position: 1148228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1148339:1
position: 1148339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1149252-1149369:1:exon

position:1149252:1
position: 1149252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149369:1
position: 1149369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1150062-1150165:1:exon

position:1150062:1
position: 1150062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1150165:1
position: 1150165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1151047-1151139:1:exon

position:1151047:1
position: 1151047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1151139:1
position: 1151139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1151351-1151440:1:exon

position:1151351:1
position: 1151351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1151440:1
position: 1151440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1152460-1152663:1:exon

position:1152460:1
position: 1152460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1152663:1
position: 1152663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1154122-1154192:1:exon

position:1154122:1
position: 1154122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1154192:1
position: 1154192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1154539-1154626:1:exon

position:1154539:1
position: 1154539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1154626:1
position: 1154626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1154726-1154806:1:exon

position:1154726:1
position: 1154726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1154806:1
position: 1154806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1157183-1157275:1:exon

position:1157183:1
position: 1157183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1157275:1
position: 1157275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1159883-1160057:1:exon

position:1159883:1
position: 1159883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1160057:1
position: 1160057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1160499-1160638:1:exon

position:1160499:1
position: 1160499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1160638:1
position: 1160638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1161739-1161840:1:exon

position:1161739:1
position: 1161739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1161840:1
position: 1161840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1163690-1163838:1:exon

position:1163690:1
position: 1163690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1163838:1
position: 1163838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1164381-1164509:1:exon

position:1164381:1
position: 1164381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164509:1
position: 1164509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1164859-1165064:1:exon

position:1164859:1
position: 1164859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1165064:1
position: 1165064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1165481-1165670:1:exon

position:1165481:1
position: 1165481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1165670:1
position: 1165670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1165754-1165867:1:exon

position:1165754:1
position: 1165754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1165867:1
position: 1165867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1166934-1167060:1:exon

position:1166934:1
position: 1166934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1167060:1
position: 1167060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1167393-1167470:1:exon

position:1167393:1
position: 1167393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1167470:1
position: 1167470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1170314-1171329:1:exon

position:1170314:1
position: 1170314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STAG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: STAG2
product: stromal antigen 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196053.1
SIO_010081: STAG2
subclass of: SO_0000673
so part of: STAG2
location: join(1096983..1097168,1132042..1132186,1133942..1134020,1134701..1134862,1137331..1137427,1138737..1138813,1140326..1140530,1142657..1142808,1145086..1145159,1145277..1145400,1146549..1146647,1146752..1146831,1147344..1147451,1148228..1148339,1149252..1149369,1150062..1150165,1151047..1151139,1151351..1151440,1152460..1152663,1154122..1154192,1154539..1154626,1154726..1154806,1157183..1157275,1159883..1160057,1160499..1160638,1161739..1161840,1163690..1163838,1164381..1164509,1164859..1165064,1165481..1165670,1165784..1165867,1166934..1167060,1167393..1167470,1170314..1171329)
location: region:1096983-1171329:1
so has part: feature:1096983-1097168:1:exon
so has part: feature:1132042-1132186:1:exon
so has part: feature:1133942-1134020:1:exon
so has part: feature:1134701-1134862:1:exon
so has part: feature:1137331-1137427:1:exon
so has part: feature:1138737-1138813:1:exon
so has part: feature:1140326-1140530:1:exon
so has part: feature:1142657-1142808:1:exon
so has part: feature:1145086-1145159:1:exon
so has part: feature:1145277-1145400:1:exon
so has part: feature:1146549-1146647:1:exon
so has part: feature:1146752-1146831:1:exon
so has part: feature:1147344-1147451:1:exon
so has part: feature:1148228-1148339:1:exon
so has part: feature:1149252-1149369:1:exon
so has part: feature:1150062-1150165:1:exon
so has part: feature:1151047-1151139:1:exon
so has part: feature:1151351-1151440:1:exon
so has part: feature:1152460-1152663:1:exon
so has part: feature:1154122-1154192:1:exon
so has part: feature:1154539-1154626:1:exon
so has part: feature:1154726-1154806:1:exon
so has part: feature:1157183-1157275:1:exon
so has part: feature:1159883-1160057:1:exon
so has part: feature:1160499-1160638:1:exon
so has part: feature:1161739-1161840:1:exon
so has part: feature:1163690-1163838:1:exon
so has part: feature:1164381-1164509:1:exon
so has part: feature:1164859-1165064:1:exon
so has part: feature:1165481-1165670:1:exon
so has part: feature:1165784-1165867:1:exon
so has part: feature:1166934-1167060:1:exon
so has part: feature:1167393-1167470:1:exon
so has part: feature:1170314-1171329:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1096983-1097168:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1132042-1132186:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1133942-1134020:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1134701-1134862:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1137331-1137427:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1138737-1138813:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1140326-1140530:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1142657-1142808:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1145086-1145159:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1145277-1145400:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1146549-1146647:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1146752-1146831:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1147344-1147451:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1148228-1148339:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1149252-1149369:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1150062-1150165:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1151047-1151139:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1151351-1151440:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1152460-1152663:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1154122-1154192:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1154539-1154626:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1154726-1154806:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1157183-1157275:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1159883-1160057:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1160499-1160638:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1161739-1161840:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1163690-1163838:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1164381-1164509:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1164859-1165064:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1165481-1165670:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1165784-1165867:1:exon

position:1165784:1
position: 1165784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1166934-1167060:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1167393-1167470:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1170314-1171329:1:exon

STAG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: STAG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cohesin subunit SA-2 isoform X1
translation: MIAAPEIPTDFTLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKSGNGGGKPGGPNRMNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINFFIQCSGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIGVLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYEAERNKIIGKRANDRLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDAIAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKELNSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSAHRPVAVAAGEFLYKKLFSRRDPEDDGILKRRGRQSPNANLVKTLVFFFLESELHEHAAYLVDSMWDCATDLLKDWECMNSLLLEEPLNGEEPLTDRQESALIEIMLCTIRQAAECHPPVGRGTGKRVLTAKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTTGRLEKHLDALLRQIRDIVEKHTDIDVLEACSKTYHALCNEEFTIFNRVDIARSQLIDELADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSRWDLFGCNYKLLKTGIENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVNTAVKEQAFTILCDVLMIFSHQIMTGGRDMLEPLVYTPDSSLQSELLSFILDHVFIDQDDDNNSADGQQDDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDIIKETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSPTFSGIKELARRFALTFGLDQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYVYLEKFMTFQMSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRNKKTKPATGKRKVPEAEESSSSDSMWMNREQTMHTPVMMQTPQLTSTIMREPKRLRPEESYMGVYPMQPEHHQAPLDYNTQVTWMLAQRQQEEAARQQQERAAMNYVKLRTNLQHAIRRGTSLMEDDEEPIVEDVMMSSEGRIEDLNEGMDFDTMDIDLPPSKNRRERTELKPDFFDPASIMDESVLGVSMF
SIO_010081: STAG2
subclass of: SO_0000673
so part of: STAG2
location: join(1132143..1132186,1133942..1134020,1134701..1134862,1137331..1137427,1138737..1138813,1140326..1140530,1142657..1142808,1145086..1145159,1145277..1145400,1146549..1146647,1146752..1146831,1147344..1147451,1148228..1148339,1149252..1149369,1150062..1150165,1151047..1151139,1151351..1151440,1152460..1152663,1154122..1154192,1154539..1154626,1154726..1154806,1157183..1157275,1159883..1160057,1160499..1160638,1161739..1161840,1163690..1163838,1164381..1164509,1164859..1165064,1165481..1165670,1165754..1165867,1166934..1167060,1167393..1167470,1170314..1170337)
location: region:1132143-1170337:1
so has part: feature:1132143-1132186:1:exon
so has part: feature:1133942-1134020:1:exon
so has part: feature:1134701-1134862:1:exon
so has part: feature:1137331-1137427:1:exon
so has part: feature:1138737-1138813:1:exon
so has part: feature:1140326-1140530:1:exon
so has part: feature:1142657-1142808:1:exon
so has part: feature:1145086-1145159:1:exon
so has part: feature:1145277-1145400:1:exon
so has part: feature:1146549-1146647:1:exon
so has part: feature:1146752-1146831:1:exon
so has part: feature:1147344-1147451:1:exon
so has part: feature:1148228-1148339:1:exon
so has part: feature:1149252-1149369:1:exon
so has part: feature:1150062-1150165:1:exon
so has part: feature:1151047-1151139:1:exon
so has part: feature:1151351-1151440:1:exon
so has part: feature:1152460-1152663:1:exon
so has part: feature:1154122-1154192:1:exon
so has part: feature:1154539-1154626:1:exon
so has part: feature:1154726-1154806:1:exon
so has part: feature:1157183-1157275:1:exon
so has part: feature:1159883-1160057:1:exon
so has part: feature:1160499-1160638:1:exon
so has part: feature:1161739-1161840:1:exon
so has part: feature:1163690-1163838:1:exon
so has part: feature:1164381-1164509:1:exon
so has part: feature:1164859-1165064:1:exon
so has part: feature:1165481-1165670:1:exon
so has part: feature:1165754-1165867:1:exon
so has part: feature:1166934-1167060:1:exon
so has part: feature:1167393-1167470:1:exon
so has part: feature:1170314-1170337:1:exon

XP_032051943.1
type: Protein
SIO_000068: ncbiprotein

position:1132143:1
position: 1132143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1170337:1
position: 1170337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1132143-1132186:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1133942-1134020:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1134701-1134862:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1137331-1137427:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1138737-1138813:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1140326-1140530:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1142657-1142808:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1145086-1145159:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1145277-1145400:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1146549-1146647:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1146752-1146831:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1147344-1147451:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1148228-1148339:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1149252-1149369:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1150062-1150165:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1151047-1151139:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1151351-1151440:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1152460-1152663:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1154122-1154192:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1154539-1154626:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1154726-1154806:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1157183-1157275:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1159883-1160057:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1160499-1160638:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1161739-1161840:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1163690-1163838:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1164381-1164509:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1164859-1165064:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1165481-1165670:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1165754-1165867:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1166934-1167060:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1167393-1167470:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1170314-1170337:1:exon

STAG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: STAG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cohesin subunit SA-2 isoform X2
translation: MIAAPEIPTDFTLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKSGNGGGKPGGPNRMNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINFFIQCSGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIGVLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYEAERNKIIGKRANDRLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDAIAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKELNSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSAHRPVAVAAGEFLYKKLFSRRDPEDDGILKRRGRQSPNANLVKTLVFFFLESELHEHAAYLVDSMWDCATDLLKDWECMNSLLLEEPLNGEEPLTDRQESALIEIMLCTIRQAAECHPPVGRGTGKRVLTAKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTTGRLEKHLDALLRQIRDIVEKHTDIDVLEACSKTYHALCNEEFTIFNRVDIARSQLIDELADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSRWDLFGCNYKLLKTGIENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQICQHYLTNVNTAVKEQAFTILCDVLMIFSHQIMTGGRDMLEPLVYTPDSSLQSELLSFILDHVFIDQDDDNNSADGQQDDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDIIKETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSPTFSGIKELARRFALTFGLDQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYVYLEKFMTFQMSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRNKKTKPATGKRKVPEAEESSSSDSMWMNREQTMHTPVMMQTPQLTSTIMREPKRLRPEESYMGVYPMQPEHHQAPLDYKQQEEAARQQQERAAMNYVKLRTNLQHAIRRGTSLMEDDEEPIVEDVMMSSEGRIEDLNEGMDFDTMDIDLPPSKNRRERTELKPDFFDPASIMDESVLGVSMF
SIO_010081: STAG2
subclass of: SO_0000673
so part of: STAG2
location: join(1132143..1132186,1133942..1134020,1134701..1134862,1137331..1137427,1138737..1138813,1140326..1140530,1142657..1142808,1145086..1145159,1145277..1145400,1146549..1146647,1146752..1146831,1147344..1147451,1148228..1148339,1149252..1149369,1150062..1150165,1151047..1151139,1151351..1151440,1152460..1152663,1154122..1154192,1154539..1154626,1154726..1154806,1157183..1157275,1159883..1160057,1160499..1160638,1161739..1161840,1163690..1163838,1164381..1164509,1164859..1165064,1165481..1165670,1165784..1165867,1166934..1167060,1167393..1167470,1170314..1170337)
location: region:1132143-1170337:1
so has part: feature:1132143-1132186:1:exon
so has part: feature:1133942-1134020:1:exon
so has part: feature:1134701-1134862:1:exon
so has part: feature:1137331-1137427:1:exon
so has part: feature:1138737-1138813:1:exon
so has part: feature:1140326-1140530:1:exon
so has part: feature:1142657-1142808:1:exon
so has part: feature:1145086-1145159:1:exon
so has part: feature:1145277-1145400:1:exon
so has part: feature:1146549-1146647:1:exon
so has part: feature:1146752-1146831:1:exon
so has part: feature:1147344-1147451:1:exon
so has part: feature:1148228-1148339:1:exon
so has part: feature:1149252-1149369:1:exon
so has part: feature:1150062-1150165:1:exon
so has part: feature:1151047-1151139:1:exon
so has part: feature:1151351-1151440:1:exon
so has part: feature:1152460-1152663:1:exon
so has part: feature:1154122-1154192:1:exon
so has part: feature:1154539-1154626:1:exon
so has part: feature:1154726-1154806:1:exon
so has part: feature:1157183-1157275:1:exon
so has part: feature:1159883-1160057:1:exon
so has part: feature:1160499-1160638:1:exon
so has part: feature:1161739-1161840:1:exon
so has part: feature:1163690-1163838:1:exon
so has part: feature:1164381-1164509:1:exon
so has part: feature:1164859-1165064:1:exon
so has part: feature:1165481-1165670:1:exon
so has part: feature:1165784-1165867:1:exon
so has part: feature:1166934-1167060:1:exon
so has part: feature:1167393-1167470:1:exon
so has part: feature:1170314-1170337:1:exon

XP_032051944.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1132143-1132186:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1133942-1134020:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1134701-1134862:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1137331-1137427:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1138737-1138813:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1140326-1140530:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1142657-1142808:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1145086-1145159:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1145277-1145400:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1146549-1146647:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1146752-1146831:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1147344-1147451:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1148228-1148339:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1149252-1149369:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1150062-1150165:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1151047-1151139:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1151351-1151440:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1152460-1152663:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1154122-1154192:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1154539-1154626:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1154726-1154806:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1157183-1157275:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1159883-1160057:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1160499-1160638:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1161739-1161840:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1163690-1163838:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1164381-1164509:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1164859-1165064:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1165481-1165670:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1165784-1165867:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1166934-1167060:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1167393-1167470:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1170314-1170337:1:exon

SH2D1A
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: SH2D1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1208683..1223006
location: region:1208683-1223006:1
so has part: feature:1208683-1223006:1:exon
subclass of: SO_0000010

116494588
type: Gene
SIO_000068: ncbigene

position:1208683:1
position: 1208683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1223006:1
position: 1223006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1208683-1223006:1:exon

SH2D1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SH2D1A
product: SH2 domain containing 1A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032196525.1
SIO_010081: SH2D1A
subclass of: SO_0000673
so part of: SH2D1A
location: join(1208683..1208819,1220955..1221018,1222416..1222551,1222878..1223006)
location: region:1208683-1223006:1
so has part: feature:1208683-1208819:1:exon
so has part: feature:1220955-1221018:1:exon
so has part: feature:1222416-1222551:1:exon
so has part: feature:1222878-1223006:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1208683-1208819:1:exon

position:1208819:1
position: 1208819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1220955-1221018:1:exon

position:1220955:1
position: 1220955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1221018:1
position: 1221018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1222416-1222551:1:exon

position:1222416:1
position: 1222416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1222551:1
position: 1222551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1222878-1223006:1:exon

position:1222878:1
position: 1222878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SH2D1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SH2D1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2 domain-containing protein 1A
translation: MEALPIYHGGISREAGEKLLLAAGTDGSYLLRDSESIPGVYCLCVLHQGYVYTYRVSKTETGSWSAETAPGVHRRLFRKVHNLISAFQKPNQGIITPLQHPVINHANVACPPGRNDSRDFYLQPARSHFPE
SIO_010081: SH2D1A
subclass of: SO_0000673
so part of: SH2D1A
location: join(1208683..1208819,1220955..1221018,1222416..1222551,1222878..1222936)
location: region:1208683-1222936:1
so has part: feature:1208683-1208819:1:exon
so has part: feature:1220955-1221018:1:exon
so has part: feature:1222416-1222551:1:exon
so has part: feature:1222878-1222936:1:exon

XP_032052416.1
type: Protein
SIO_000068: ncbiprotein

position:1222936:1
position: 1222936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1208683-1208819:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1220955-1221018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1222416-1222551:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1222878-1222936:1:exon

TENM1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TENM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1230097..2138666)
location: region:1230097-2138666:-1
so has part: feature:1230097-2138666:-1:exon
subclass of: SO_0000010

116494446
type: Gene
SIO_000068: ncbigene

position:1230097:-1
position: 1230097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2138666:-1
position: 2138666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1230097-2138666:-1:exon

TENM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: TENM1
product: teneurin transmembrane protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032196349.1
SIO_010081: TENM1
subclass of: SO_0000673
so part of: TENM1
location: complement(join(1230097..1231542,1232936..1233078,1233587..1234807,1235470..1235857,1239941..1240237,1246287..1246522,1250102..1250274,1259298..1259808,1261600..1261966,1279721..1279875,1291518..1291750,1295906..1295926,1296865..1297114,1301855..1301998,1307571..1307838,1310980..1311241,1312990..1313109,1319937..1320153,1333880..1334026,1335881..1335904,1337028..1337213,1356612..1356812,1360137..1360331,1361463..1361564,1365000..1365210,1366667..1366866,1372656..1372808,1383739..1383977,1397167..1397407,1480362..1480640,1754253..1754358,1932160..1932249,1986290..1986387,2064630..2064701,2138578..2138666))
location: region:1230097-2138666:-1
so has part: feature:2138578-2138666:-1:exon
so has part: feature:2064630-2064701:-1:exon
so has part: feature:1986290-1986387:-1:exon
so has part: feature:1932160-1932249:-1:exon
so has part: feature:1754253-1754358:-1:exon
so has part: feature:1480362-1480640:-1:exon
so has part: feature:1397167-1397407:-1:exon
so has part: feature:1383739-1383977:-1:exon
so has part: feature:1372656-1372808:-1:exon
so has part: feature:1366667-1366866:-1:exon
so has part: feature:1365000-1365210:-1:exon
so has part: feature:1361463-1361564:-1:exon
so has part: feature:1360137-1360331:-1:exon
so has part: feature:1356612-1356812:-1:exon
so has part: feature:1337028-1337213:-1:exon
so has part: feature:1335881-1335904:-1:exon
so has part: feature:1333880-1334026:-1:exon
so has part: feature:1319937-1320153:-1:exon
so has part: feature:1312990-1313109:-1:exon
so has part: feature:1310980-1311241:-1:exon
so has part: feature:1307571-1307838:-1:exon
so has part: feature:1301855-1301998:-1:exon
so has part: feature:1296865-1297114:-1:exon
so has part: feature:1295906-1295926:-1:exon
so has part: feature:1291518-1291750:-1:exon
so has part: feature:1279721-1279875:-1:exon
so has part: feature:1261600-1261966:-1:exon
so has part: feature:1259298-1259808:-1:exon
so has part: feature:1250102-1250274:-1:exon
so has part: feature:1246287-1246522:-1:exon
so has part: feature:1239941-1240237:-1:exon
so has part: feature:1235470-1235857:-1:exon
so has part: feature:1233587-1234807:-1:exon
so has part: feature:1232936-1233078:-1:exon
so has part: feature:1230097-1231542:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2138578-2138666:-1:exon

position:2138578:-1
position: 2138578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2064630-2064701:-1:exon

position:2064630:-1
position: 2064630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2064701:-1
position: 2064701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1986290-1986387:-1:exon

position:1986290:-1
position: 1986290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1986387:-1
position: 1986387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1932160-1932249:-1:exon

position:1932160:-1
position: 1932160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1932249:-1
position: 1932249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1754253-1754358:-1:exon

position:1754253:-1
position: 1754253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1754358:-1
position: 1754358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1480362-1480640:-1:exon

position:1480362:-1
position: 1480362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1480640:-1
position: 1480640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1397167-1397407:-1:exon

position:1397167:-1
position: 1397167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1397407:-1
position: 1397407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1383739-1383977:-1:exon

position:1383739:-1
position: 1383739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1383977:-1
position: 1383977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1372656-1372808:-1:exon

position:1372656:-1
position: 1372656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1372808:-1
position: 1372808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1366667-1366866:-1:exon

position:1366667:-1
position: 1366667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366866:-1
position: 1366866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1365000-1365210:-1:exon

position:1365000:-1
position: 1365000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1365210:-1
position: 1365210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1361463-1361564:-1:exon

position:1361463:-1
position: 1361463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1361564:-1
position: 1361564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1360137-1360331:-1:exon

position:1360137:-1
position: 1360137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1360331:-1
position: 1360331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1356612-1356812:-1:exon

position:1356612:-1
position: 1356612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1356812:-1
position: 1356812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1337028-1337213:-1:exon

position:1337028:-1
position: 1337028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1337213:-1
position: 1337213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1335881-1335904:-1:exon

position:1335881:-1
position: 1335881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1335904:-1
position: 1335904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1333880-1334026:-1:exon

position:1333880:-1
position: 1333880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1334026:-1
position: 1334026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1319937-1320153:-1:exon

position:1319937:-1
position: 1319937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1320153:-1
position: 1320153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1312990-1313109:-1:exon

position:1312990:-1
position: 1312990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1313109:-1
position: 1313109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1310980-1311241:-1:exon

position:1310980:-1
position: 1310980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1311241:-1
position: 1311241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1307571-1307838:-1:exon

position:1307571:-1
position: 1307571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1307838:-1
position: 1307838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1301855-1301998:-1:exon

position:1301855:-1
position: 1301855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1301998:-1
position: 1301998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1296865-1297114:-1:exon

position:1296865:-1
position: 1296865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1297114:-1
position: 1297114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1295906-1295926:-1:exon

position:1295906:-1
position: 1295906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1295926:-1
position: 1295926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1291518-1291750:-1:exon

position:1291518:-1
position: 1291518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1291750:-1
position: 1291750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1279721-1279875:-1:exon

position:1279721:-1
position: 1279721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1279875:-1
position: 1279875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1261600-1261966:-1:exon

position:1261600:-1
position: 1261600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1261966:-1
position: 1261966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1259298-1259808:-1:exon

position:1259298:-1
position: 1259298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1259808:-1
position: 1259808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1250102-1250274:-1:exon

position:1250102:-1
position: 1250102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1250274:-1
position: 1250274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1246287-1246522:-1:exon

position:1246287:-1
position: 1246287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1246522:-1
position: 1246522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1239941-1240237:-1:exon

position:1239941:-1
position: 1239941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1240237:-1
position: 1240237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1235470-1235857:-1:exon

position:1235470:-1
position: 1235470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1235857:-1
position: 1235857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1233587-1234807:-1:exon

position:1233587:-1
position: 1233587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1234807:-1
position: 1234807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1232936-1233078:-1:exon

position:1232936:-1
position: 1232936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1233078:-1
position: 1233078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1230097-1231542:-1:exon

position:1231542:-1
position: 1231542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TENM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: TENM1
product: teneurin transmembrane protein 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032196354.1
SIO_010081: TENM1
subclass of: SO_0000673
so part of: TENM1
location: complement(join(1230097..1231542,1232936..1233078,1233587..1234807,1235470..1235857,1239941..1240237,1246287..1246522,1250102..1250274,1259298..1259808,1261600..1261966,1279721..1279875,1291518..1291750,1295906..1295926,1296865..1297114,1301855..1301998,1307571..1307838,1310980..1311241,1312990..1313109,1319937..1320153,1333880..1334026,1335881..1335904,1337028..1337213,1356612..1356812,1360137..1360331,1361463..1361564,1365000..1365210,1366667..1366866,1372656..1372808,1383739..1383977,1397167..1397407,1452237..1452497,1480362..1480640,1754253..1754358,1932160..1932249,1986290..1986387,2064630..2064701,2138578..2138666))
location: region:1230097-2138666:-1
so has part: feature:2138578-2138666:-1:exon
so has part: feature:2064630-2064701:-1:exon
so has part: feature:1986290-1986387:-1:exon
so has part: feature:1932160-1932249:-1:exon
so has part: feature:1754253-1754358:-1:exon
so has part: feature:1480362-1480640:-1:exon
so has part: feature:1452237-1452497:-1:exon
so has part: feature:1397167-1397407:-1:exon
so has part: feature:1383739-1383977:-1:exon
so has part: feature:1372656-1372808:-1:exon
so has part: feature:1366667-1366866:-1:exon
so has part: feature:1365000-1365210:-1:exon
so has part: feature:1361463-1361564:-1:exon
so has part: feature:1360137-1360331:-1:exon
so has part: feature:1356612-1356812:-1:exon
so has part: feature:1337028-1337213:-1:exon
so has part: feature:1335881-1335904:-1:exon
so has part: feature:1333880-1334026:-1:exon
so has part: feature:1319937-1320153:-1:exon
so has part: feature:1312990-1313109:-1:exon
so has part: feature:1310980-1311241:-1:exon
so has part: feature:1307571-1307838:-1:exon
so has part: feature:1301855-1301998:-1:exon
so has part: feature:1296865-1297114:-1:exon
so has part: feature:1295906-1295926:-1:exon
so has part: feature:1291518-1291750:-1:exon
so has part: feature:1279721-1279875:-1:exon
so has part: feature:1261600-1261966:-1:exon
so has part: feature:1259298-1259808:-1:exon
so has part: feature:1250102-1250274:-1:exon
so has part: feature:1246287-1246522:-1:exon
so has part: feature:1239941-1240237:-1:exon
so has part: feature:1235470-1235857:-1:exon
so has part: feature:1233587-1234807:-1:exon
so has part: feature:1232936-1233078:-1:exon
so has part: feature:1230097-1231542:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2138578-2138666:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2064630-2064701:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1986290-1986387:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1932160-1932249:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1754253-1754358:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1480362-1480640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1452237-1452497:-1:exon

position:1452237:-1
position: 1452237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1452497:-1
position: 1452497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1397167-1397407:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1383739-1383977:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1372656-1372808:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1366667-1366866:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1365000-1365210:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1361463-1361564:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1360137-1360331:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1356612-1356812:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1337028-1337213:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1335881-1335904:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1333880-1334026:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1319937-1320153:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1312990-1313109:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1310980-1311241:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1307571-1307838:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1301855-1301998:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1296865-1297114:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1295906-1295926:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1291518-1291750:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1279721-1279875:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1261600-1261966:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1259298-1259808:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1250102-1250274:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1246287-1246522:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1239941-1240237:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1235470-1235857:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1233587-1234807:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1232936-1233078:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1230097-1231542:-1:exon

TENM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: TENM1
product: teneurin transmembrane protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032196351.1
SIO_010081: TENM1
subclass of: SO_0000673
so part of: TENM1
location: complement(join(1230097..1231542,1232936..1233078,1233587..1234807,1235470..1235857,1239941..1240237,1246287..1246522,1250102..1250274,1259298..1259808,1261600..1261966,1279721..1279875,1291518..1291750,1295906..1295926,1296865..1297114,1301855..1301998,1307571..1307838,1310980..1311241,1312990..1313109,1319937..1320153,1333880..1334026,1335881..1335904,1337028..1337213,1356612..1356812,1360137..1360331,1361463..1361564,1365000..1365210,1366667..1366866,1372656..1372808,1383739..1383977,1397167..1397407,1480362..1480640,1745005..1745025))
location: region:1230097-1745025:-1
so has part: feature:1745005-1745025:-1:exon
so has part: feature:1480362-1480640:-1:exon
so has part: feature:1397167-1397407:-1:exon
so has part: feature:1383739-1383977:-1:exon
so has part: feature:1372656-1372808:-1:exon
so has part: feature:1366667-1366866:-1:exon
so has part: feature:1365000-1365210:-1:exon
so has part: feature:1361463-1361564:-1:exon
so has part: feature:1360137-1360331:-1:exon
so has part: feature:1356612-1356812:-1:exon
so has part: feature:1337028-1337213:-1:exon
so has part: feature:1335881-1335904:-1:exon
so has part: feature:1333880-1334026:-1:exon
so has part: feature:1319937-1320153:-1:exon
so has part: feature:1312990-1313109:-1:exon
so has part: feature:1310980-1311241:-1:exon
so has part: feature:1307571-1307838:-1:exon
so has part: feature:1301855-1301998:-1:exon
so has part: feature:1296865-1297114:-1:exon
so has part: feature:1295906-1295926:-1:exon
so has part: feature:1291518-1291750:-1:exon
so has part: feature:1279721-1279875:-1:exon
so has part: feature:1261600-1261966:-1:exon
so has part: feature:1259298-1259808:-1:exon
so has part: feature:1250102-1250274:-1:exon
so has part: feature:1246287-1246522:-1:exon
so has part: feature:1239941-1240237:-1:exon
so has part: feature:1235470-1235857:-1:exon
so has part: feature:1233587-1234807:-1:exon
so has part: feature:1232936-1233078:-1:exon
so has part: feature:1230097-1231542:-1:exon

position:1745025:-1
position: 1745025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1745005-1745025:-1:exon

position:1745005:-1
position: 1745005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1480362-1480640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1397167-1397407:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1383739-1383977:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1372656-1372808:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1366667-1366866:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1365000-1365210:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1361463-1361564:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1360137-1360331:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1356612-1356812:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1337028-1337213:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1335881-1335904:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1333880-1334026:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1319937-1320153:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1312990-1313109:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1310980-1311241:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1307571-1307838:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1301855-1301998:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1296865-1297114:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1295906-1295926:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1291518-1291750:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1279721-1279875:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1261600-1261966:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1259298-1259808:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1250102-1250274:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1246287-1246522:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1239941-1240237:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1235470-1235857:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1233587-1234807:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1232936-1233078:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1230097-1231542:-1:exon

TENM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: TENM1
product: teneurin transmembrane protein 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032196352.1
SIO_010081: TENM1
subclass of: SO_0000673
so part of: TENM1
location: complement(join(1230097..1231542,1232936..1233078,1233587..1234807,1235470..1235857,1239941..1240237,1246287..1246522,1250102..1250274,1259298..1259808,1261600..1261966,1279721..1279875,1291518..1291750,1295906..1295926,1296865..1297114,1301855..1301998,1307571..1307838,1310980..1311241,1312990..1313109,1319937..1320153,1333880..1334026,1335881..1335904,1337028..1337213,1356612..1356812,1360137..1360331,1361463..1361564,1365000..1365210,1366667..1366866,1372656..1372808,1383739..1383977,1397167..1397407,1480362..1480640,1564804..1564823))
location: region:1230097-1564823:-1
so has part: feature:1564804-1564823:-1:exon
so has part: feature:1480362-1480640:-1:exon
so has part: feature:1397167-1397407:-1:exon
so has part: feature:1383739-1383977:-1:exon
so has part: feature:1372656-1372808:-1:exon
so has part: feature:1366667-1366866:-1:exon
so has part: feature:1365000-1365210:-1:exon
so has part: feature:1361463-1361564:-1:exon
so has part: feature:1360137-1360331:-1:exon
so has part: feature:1356612-1356812:-1:exon
so has part: feature:1337028-1337213:-1:exon
so has part: feature:1335881-1335904:-1:exon
so has part: feature:1333880-1334026:-1:exon
so has part: feature:1319937-1320153:-1:exon
so has part: feature:1312990-1313109:-1:exon
so has part: feature:1310980-1311241:-1:exon
so has part: feature:1307571-1307838:-1:exon
so has part: feature:1301855-1301998:-1:exon
so has part: feature:1296865-1297114:-1:exon
so has part: feature:1295906-1295926:-1:exon
so has part: feature:1291518-1291750:-1:exon
so has part: feature:1279721-1279875:-1:exon
so has part: feature:1261600-1261966:-1:exon
so has part: feature:1259298-1259808:-1:exon
so has part: feature:1250102-1250274:-1:exon
so has part: feature:1246287-1246522:-1:exon
so has part: feature:1239941-1240237:-1:exon
so has part: feature:1235470-1235857:-1:exon
so has part: feature:1233587-1234807:-1:exon
so has part: feature:1232936-1233078:-1:exon
so has part: feature:1230097-1231542:-1:exon

position:1564823:-1
position: 1564823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1564804-1564823:-1:exon

position:1564804:-1
position: 1564804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1480362-1480640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1397167-1397407:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1383739-1383977:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1372656-1372808:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1366667-1366866:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1365000-1365210:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1361463-1361564:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1360137-1360331:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1356612-1356812:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1337028-1337213:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1335881-1335904:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1333880-1334026:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1319937-1320153:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1312990-1313109:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1310980-1311241:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1307571-1307838:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1301855-1301998:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1296865-1297114:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1295906-1295926:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1291518-1291750:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1279721-1279875:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1261600-1261966:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1259298-1259808:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1250102-1250274:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1246287-1246522:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1239941-1240237:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1235470-1235857:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1233587-1234807:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1232936-1233078:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1230097-1231542:-1:exon

TENM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: TENM1
product: teneurin transmembrane protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032196348.1
SIO_010081: TENM1
subclass of: SO_0000673
so part of: TENM1
location: complement(join(1230097..1231542,1232936..1233078,1233587..1234807,1235470..1235857,1239941..1240237,1246287..1246522,1250102..1250274,1259298..1259808,1261600..1261966,1279721..1279875,1291518..1291750,1295906..1295926,1296865..1297114,1301855..1301998,1307571..1307838,1310980..1311241,1312990..1313109,1319937..1320153,1333880..1334026,1335881..1335904,1337028..1337213,1356612..1356812,1360137..1360331,1361463..1361564,1365000..1365210,1366667..1366866,1372656..1372808,1383739..1383977,1397167..1397407,1480362..1480640,1564103..1564408))
location: region:1230097-1564408:-1
so has part: feature:1564103-1564408:-1:exon
so has part: feature:1480362-1480640:-1:exon
so has part: feature:1397167-1397407:-1:exon
so has part: feature:1383739-1383977:-1:exon
so has part: feature:1372656-1372808:-1:exon
so has part: feature:1366667-1366866:-1:exon
so has part: feature:1365000-1365210:-1:exon
so has part: feature:1361463-1361564:-1:exon
so has part: feature:1360137-1360331:-1:exon
so has part: feature:1356612-1356812:-1:exon
so has part: feature:1337028-1337213:-1:exon
so has part: feature:1335881-1335904:-1:exon
so has part: feature:1333880-1334026:-1:exon
so has part: feature:1319937-1320153:-1:exon
so has part: feature:1312990-1313109:-1:exon
so has part: feature:1310980-1311241:-1:exon
so has part: feature:1307571-1307838:-1:exon
so has part: feature:1301855-1301998:-1:exon
so has part: feature:1296865-1297114:-1:exon
so has part: feature:1295906-1295926:-1:exon
so has part: feature:1291518-1291750:-1:exon
so has part: feature:1279721-1279875:-1:exon
so has part: feature:1261600-1261966:-1:exon
so has part: feature:1259298-1259808:-1:exon
so has part: feature:1250102-1250274:-1:exon
so has part: feature:1246287-1246522:-1:exon
so has part: feature:1239941-1240237:-1:exon
so has part: feature:1235470-1235857:-1:exon
so has part: feature:1233587-1234807:-1:exon
so has part: feature:1232936-1233078:-1:exon
so has part: feature:1230097-1231542:-1:exon

position:1564408:-1
position: 1564408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1564103-1564408:-1:exon

position:1564103:-1
position: 1564103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1480362-1480640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1397167-1397407:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1383739-1383977:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1372656-1372808:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1366667-1366866:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1365000-1365210:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1361463-1361564:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1360137-1360331:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1356612-1356812:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1337028-1337213:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1335881-1335904:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1333880-1334026:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1319937-1320153:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1312990-1313109:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1310980-1311241:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1307571-1307838:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1301855-1301998:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1296865-1297114:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1295906-1295926:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1291518-1291750:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1279721-1279875:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1261600-1261966:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1259298-1259808:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1250102-1250274:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1246287-1246522:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1239941-1240237:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1235470-1235857:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1233587-1234807:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1232936-1233078:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1230097-1231542:-1:exon

TENM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: TENM1
product: teneurin transmembrane protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032196346.1
SIO_010081: TENM1
subclass of: SO_0000673
so part of: TENM1
location: complement(join(1230097..1231542,1232936..1233078,1233587..1234807,1235470..1235857,1239941..1240237,1246287..1246522,1250102..1250274,1259298..1259808,1261600..1261966,1279721..1279875,1291518..1291750,1295906..1295926,1296865..1297114,1301855..1301998,1307571..1307838,1310980..1311241,1312990..1313109,1319937..1320153,1333880..1334026,1335881..1335904,1337028..1337213,1356612..1356812,1360137..1360331,1361463..1361564,1365000..1365210,1366667..1366866,1372656..1372805,1383739..1383977,1397167..1397407,1452237..1452497,1467358..1467396))
location: region:1230097-1467396:-1
so has part: feature:1467358-1467396:-1:exon
so has part: feature:1452237-1452497:-1:exon
so has part: feature:1397167-1397407:-1:exon
so has part: feature:1383739-1383977:-1:exon
so has part: feature:1372656-1372805:-1:exon
so has part: feature:1366667-1366866:-1:exon
so has part: feature:1365000-1365210:-1:exon
so has part: feature:1361463-1361564:-1:exon
so has part: feature:1360137-1360331:-1:exon
so has part: feature:1356612-1356812:-1:exon
so has part: feature:1337028-1337213:-1:exon
so has part: feature:1335881-1335904:-1:exon
so has part: feature:1333880-1334026:-1:exon
so has part: feature:1319937-1320153:-1:exon
so has part: feature:1312990-1313109:-1:exon
so has part: feature:1310980-1311241:-1:exon
so has part: feature:1307571-1307838:-1:exon
so has part: feature:1301855-1301998:-1:exon
so has part: feature:1296865-1297114:-1:exon
so has part: feature:1295906-1295926:-1:exon
so has part: feature:1291518-1291750:-1:exon
so has part: feature:1279721-1279875:-1:exon
so has part: feature:1261600-1261966:-1:exon
so has part: feature:1259298-1259808:-1:exon
so has part: feature:1250102-1250274:-1:exon
so has part: feature:1246287-1246522:-1:exon
so has part: feature:1239941-1240237:-1:exon
so has part: feature:1235470-1235857:-1:exon
so has part: feature:1233587-1234807:-1:exon
so has part: feature:1232936-1233078:-1:exon
so has part: feature:1230097-1231542:-1:exon

position:1467396:-1
position: 1467396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1467358-1467396:-1:exon

position:1467358:-1
position: 1467358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1452237-1452497:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1397167-1397407:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1383739-1383977:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1372656-1372805:-1:exon

position:1372805:-1
position: 1372805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1366667-1366866:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1365000-1365210:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1361463-1361564:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1360137-1360331:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1356612-1356812:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1337028-1337213:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1335881-1335904:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1333880-1334026:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1319937-1320153:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1312990-1313109:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1310980-1311241:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1307571-1307838:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1301855-1301998:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1296865-1297114:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1295906-1295926:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1291518-1291750:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1279721-1279875:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1261600-1261966:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1259298-1259808:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1250102-1250274:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1246287-1246522:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1239941-1240237:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1235470-1235857:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1233587-1234807:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1232936-1233078:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1230097-1231542:-1:exon

TENM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: TENM1
product: teneurin transmembrane protein 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032196353.1
SIO_010081: TENM1
subclass of: SO_0000673
so part of: TENM1
location: complement(join(1230097..1231542,1232936..1233078,1233587..1234807,1235470..1235857,1239941..1240237,1246287..1246522,1250102..1250274,1259298..1259808,1261600..1261966,1279721..1279875,1291518..1291750,1295906..1295926,1296865..1297114,1301855..1301998,1307571..1307838,1310980..1311241,1312990..1313109,1319937..1320153,1337028..1337213,1356612..1356812,1360137..1360331,1361463..1361564,1365000..1365210,1366667..1366866,1372656..1372808,1383739..1383977,1397167..1397407,1452237..1452497,1467358..1467396))
location: region:1230097-1467396:-1
so has part: feature:1467358-1467396:-1:exon
so has part: feature:1452237-1452497:-1:exon
so has part: feature:1397167-1397407:-1:exon
so has part: feature:1383739-1383977:-1:exon
so has part: feature:1372656-1372808:-1:exon
so has part: feature:1366667-1366866:-1:exon
so has part: feature:1365000-1365210:-1:exon
so has part: feature:1361463-1361564:-1:exon
so has part: feature:1360137-1360331:-1:exon
so has part: feature:1356612-1356812:-1:exon
so has part: feature:1337028-1337213:-1:exon
so has part: feature:1319937-1320153:-1:exon
so has part: feature:1312990-1313109:-1:exon
so has part: feature:1310980-1311241:-1:exon
so has part: feature:1307571-1307838:-1:exon
so has part: feature:1301855-1301998:-1:exon
so has part: feature:1296865-1297114:-1:exon
so has part: feature:1295906-1295926:-1:exon
so has part: feature:1291518-1291750:-1:exon
so has part: feature:1279721-1279875:-1:exon
so has part: feature:1261600-1261966:-1:exon
so has part: feature:1259298-1259808:-1:exon
so has part: feature:1250102-1250274:-1:exon
so has part: feature:1246287-1246522:-1:exon
so has part: feature:1239941-1240237:-1:exon
so has part: feature:1235470-1235857:-1:exon
so has part: feature:1233587-1234807:-1:exon
so has part: feature:1232936-1233078:-1:exon
so has part: feature:1230097-1231542:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1467358-1467396:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1452237-1452497:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1397167-1397407:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1383739-1383977:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1372656-1372808:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1366667-1366866:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1365000-1365210:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1361463-1361564:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1360137-1360331:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1356612-1356812:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1337028-1337213:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1319937-1320153:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1312990-1313109:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1310980-1311241:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1307571-1307838:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1301855-1301998:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1296865-1297114:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1295906-1295926:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1291518-1291750:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1279721-1279875:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1261600-1261966:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1259298-1259808:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1250102-1250274:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1246287-1246522:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1239941-1240237:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1235470-1235857:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1233587-1234807:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1232936-1233078:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1230097-1231542:-1:exon

TENM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: TENM1
product: teneurin transmembrane protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032196347.1
SIO_010081: TENM1
subclass of: SO_0000673
so part of: TENM1
location: complement(join(1230097..1231542,1232936..1233078,1233587..1234807,1235470..1235857,1239941..1240237,1246287..1246522,1250102..1250274,1259298..1259808,1261600..1261966,1279721..1279875,1291518..1291750,1295906..1295926,1296865..1297114,1301855..1301998,1307571..1307838,1310980..1311241,1312990..1313109,1319937..1320153,1333880..1334026,1337028..1337213,1356612..1356812,1360137..1360331,1361463..1361564,1365000..1365210,1366667..1366866,1372656..1372808,1383739..1383977,1397167..1397407,1452237..1452497,1467358..1467396))
location: region:1230097-1467396:-1
so has part: feature:1467358-1467396:-1:exon
so has part: feature:1452237-1452497:-1:exon
so has part: feature:1397167-1397407:-1:exon
so has part: feature:1383739-1383977:-1:exon
so has part: feature:1372656-1372808:-1:exon
so has part: feature:1366667-1366866:-1:exon
so has part: feature:1365000-1365210:-1:exon
so has part: feature:1361463-1361564:-1:exon
so has part: feature:1360137-1360331:-1:exon
so has part: feature:1356612-1356812:-1:exon
so has part: feature:1337028-1337213:-1:exon
so has part: feature:1333880-1334026:-1:exon
so has part: feature:1319937-1320153:-1:exon
so has part: feature:1312990-1313109:-1:exon
so has part: feature:1310980-1311241:-1:exon
so has part: feature:1307571-1307838:-1:exon
so has part: feature:1301855-1301998:-1:exon
so has part: feature:1296865-1297114:-1:exon
so has part: feature:1295906-1295926:-1:exon
so has part: feature:1291518-1291750:-1:exon
so has part: feature:1279721-1279875:-1:exon
so has part: feature:1261600-1261966:-1:exon
so has part: feature:1259298-1259808:-1:exon
so has part: feature:1250102-1250274:-1:exon
so has part: feature:1246287-1246522:-1:exon
so has part: feature:1239941-1240237:-1:exon
so has part: feature:1235470-1235857:-1:exon
so has part: feature:1233587-1234807:-1:exon
so has part: feature:1232936-1233078:-1:exon
so has part: feature:1230097-1231542:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1467358-1467396:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1452237-1452497:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1397167-1397407:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1383739-1383977:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1372656-1372808:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1366667-1366866:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1365000-1365210:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1361463-1361564:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1360137-1360331:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1356612-1356812:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1337028-1337213:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1333880-1334026:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1319937-1320153:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1312990-1313109:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1310980-1311241:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1307571-1307838:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1301855-1301998:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1296865-1297114:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1295906-1295926:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1291518-1291750:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1279721-1279875:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1261600-1261966:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1259298-1259808:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1250102-1250274:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1246287-1246522:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1239941-1240237:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1235470-1235857:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1233587-1234807:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1232936-1233078:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1230097-1231542:-1:exon

TENM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: TENM1
product: teneurin transmembrane protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032196345.1
SIO_010081: TENM1
subclass of: SO_0000673
so part of: TENM1
location: complement(join(1230097..1231542,1232936..1233078,1233587..1234807,1235470..1235857,1239941..1240237,1246287..1246522,1250102..1250274,1259298..1259808,1261600..1261966,1279721..1279875,1291518..1291750,1295906..1295926,1296865..1297114,1301855..1301998,1307571..1307838,1310980..1311241,1312990..1313109,1319937..1320153,1333880..1334026,1335881..1335904,1337028..1337213,1356612..1356812,1360137..1360331,1361463..1361564,1365000..1365210,1366667..1366866,1372656..1372808,1383739..1383977,1397167..1397407,1452237..1452497,1467358..1467396))
location: region:1230097-1467396:-1
so has part: feature:1467358-1467396:-1:exon
so has part: feature:1452237-1452497:-1:exon
so has part: feature:1397167-1397407:-1:exon
so has part: feature:1383739-1383977:-1:exon
so has part: feature:1372656-1372808:-1:exon
so has part: feature:1366667-1366866:-1:exon
so has part: feature:1365000-1365210:-1:exon
so has part: feature:1361463-1361564:-1:exon
so has part: feature:1360137-1360331:-1:exon
so has part: feature:1356612-1356812:-1:exon
so has part: feature:1337028-1337213:-1:exon
so has part: feature:1335881-1335904:-1:exon
so has part: feature:1333880-1334026:-1:exon
so has part: feature:1319937-1320153:-1:exon
so has part: feature:1312990-1313109:-1:exon
so has part: feature:1310980-1311241:-1:exon
so has part: feature:1307571-1307838:-1:exon
so has part: feature:1301855-1301998:-1:exon
so has part: feature:1296865-1297114:-1:exon
so has part: feature:1295906-1295926:-1:exon
so has part: feature:1291518-1291750:-1:exon
so has part: feature:1279721-1279875:-1:exon
so has part: feature:1261600-1261966:-1:exon
so has part: feature:1259298-1259808:-1:exon
so has part: feature:1250102-1250274:-1:exon
so has part: feature:1246287-1246522:-1:exon
so has part: feature:1239941-1240237:-1:exon
so has part: feature:1235470-1235857:-1:exon
so has part: feature:1233587-1234807:-1:exon
so has part: feature:1232936-1233078:-1:exon
so has part: feature:1230097-1231542:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1467358-1467396:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1452237-1452497:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1397167-1397407:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1383739-1383977:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1372656-1372808:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1366667-1366866:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1365000-1365210:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1361463-1361564:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1360137-1360331:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1356612-1356812:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1337028-1337213:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1335881-1335904:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1333880-1334026:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1319937-1320153:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1312990-1313109:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1310980-1311241:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1307571-1307838:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1301855-1301998:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1296865-1297114:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1295906-1295926:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1291518-1291750:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1279721-1279875:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1261600-1261966:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1259298-1259808:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1250102-1250274:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1246287-1246522:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1239941-1240237:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1235470-1235857:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1233587-1234807:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1232936-1233078:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1230097-1231542:-1:exon

TENM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: TENM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: teneurin-1 isoform X4
translation: MEQMDCKPYQPLSKVKHEVDLTYTSSSDESEDGRKQRQSYDSRETLNEYSQELRLNYNSQSRKRKTIDQSTQDMPGSPHNQFTFRPLPPPPPPPHACTCTRKPPPAADTLQRRSMTTRSQPSPAAPTPPTSTQDSVHLHNSWVLNSNIPLETRHFLFKHGSGSSAIFSAASQNYPLTSNTVYSPPPRPLPRSTFSRPAFTFNKPYRCCNWKCTALSATAITVTLALLLAYVIAVHLFGLTWQLQPVEGQLYENGVSKGNRGTESVDTTYSPIGGKVSDKTEKKVFQKGRTIDTGEVEIGAQVMQMIPPGLFWRFQITIHHPMYLKFNISLAKDSLLGIYGRRNIPPTHTQFDFVKLMDGKQLIKQEPKNSEEPQQAPRNLILTSLQETGFIEYMDQGAWHMAFYNDGKKMEQVFVLTTAIEVLDDCSTNCNGNGECISGHCHCFPGFLGPDCAKDSCPVLCSGNGEYEKGHCVCRNGWKGPECDVPEEQCIDPTCFGHGTCIMGVCICVPGYKGEICEEEDCLDPMCSGHGVCVQGECHCSAGWGGVNCETSLPVCQEQCSGHGTFLLDAGLCSCEPQWTGSDCSTELCTLDCGSHGVCSRGICQCEEGWVGPTCEERTCHSHCAEHGQCKDGKCECSPGWEGDHCTIAHYLDAVRDGCPGLCYGNGRCTLDQNGWHCVCQVGWSGSGCNVVMEMVCGDNLDNDGDGLTDCVDPDCCQQNNCYASPLCQGSPDPLDLIQHSQPPFSQHPPRLFYDRIRFLIGKESTHVIPGDVSFESRRACVIRGQVLAIDGTPLVGVNVSFLHHNEYGYTISRQDGSFDLVAVGGISVTLVFDRSPFISEKRTLWLPWNRFIIVDKVVMQRTESDIPSCDISSFISPNPIVLPSPLTAFGGSCPERGTVIPELQVVQEEIPIPSSFVKLSYLSSRTPGYKTLLRMILTHATIPSGMTKVHLIVAVEGRLLQKWFPAAANLVYTFAWNKTDIYGQKVSGLAEAMVSVGYEYEKCPDFILWEKRTVTLQGFEMDASNLGGWSINKHHVLNPQSGIVHKGNGENMFISQQPPVISTVMGNGHQRSVSCSNCNGLALNSKLFAPVALASGPDGSLYIGDFNFVRRIFPSGNSIGILELRNRDTRHSTSPAHKYYLAVDPVSESLYLSDTNTRKIYKAKSLVETKDLAKNADVVAGTGDQCLPFDQSHCGDGGKASEASLNSPRGITVDKHGFIYFVDGTMIRKIDENGVITTIIGSNGLTSTQPLSCDSGMDITQVRLEWPTDLTVNPLDNSLYVLDNNIVLQISENRRVRIIAGRPIHCQVPGIDHFIISKVAIHSTLESARAIAVSHSGILYIAETDERKINRIQQVTTNGEISIIAGTPSDCDCKIDPNCDCFSGDGGYAKDAKLKAPSSLAVSPDDTLYVADLGNVRIRSVSRNKAHLSDTNMYEIASPADQELYQFTINGTHLHTLNLITRDYIYNFTYSSEGDIGTITSSNGNSVHIRRDTSGLPLWIVVPGGQVYWLTISSNGVLKRVYAQGYNLALMTYPGNTGLLATKSDENGWTTVYEYDSDGHLTNATFPTGEVSSFHSDVEKLTRVELDTSNRENVITATNFSATSTIYTLKQDNTQNIYRVSLDGSLRVTFASGMEITLNTEPHILAGVISPTLGKCNISLPGEHNSNLIEWRQRREQTKGNISTFERRLRAHNRNLLSIDFDHVTRTGKIYDDHRKFTLRIMYDQTGRPVLWSPISKYNEVNITYSHSGLVTYIQRGTWTEKMEYDPSGNIISRTWADGKIWSYTYLEKSVMLLLHSQRRYIFEYDQSDYLLSVTMPSMVRHALQTMLSVGYYRNIYTPPDSTAAFIQDITRDGRLLQTLYPGTGRRVLYKYTKQSRLSEILYDTTQVTFTYEESSGVIKTIHLMHDGFICTIRYRQTGPLISRQIFRFSEEGLVNARFDYSYNNFRVTSMQAMINETPLPIDLYRYVDVSGRTEQFGKFSVINYDLNQVITTTVMKHT…
SIO_010081: TENM1
subclass of: SO_0000673
so part of: TENM1
location: complement(join(1230784..1231542,1232936..1233078,1233587..1234807,1235470..1235857,1239941..1240237,1246287..1246522,1250102..1250274,1259298..1259808,1261600..1261966,1279721..1279875,1291518..1291750,1295906..1295926,1296865..1297114,1301855..1301998,1307571..1307838,1310980..1311241,1312990..1313109,1319937..1320153,1333880..1334026,1335881..1335904,1337028..1337213,1356612..1356812,1360137..1360331,1361463..1361564,1365000..1365210,1366667..1366866,1372656..1372808,1383739..1383977,1397167..1397407,1480362..1480578))
location: region:1230784-1480578:-1
so has part: feature:1480362-1480578:-1:exon
so has part: feature:1397167-1397407:-1:exon
so has part: feature:1383739-1383977:-1:exon
so has part: feature:1372656-1372808:-1:exon
so has part: feature:1366667-1366866:-1:exon
so has part: feature:1365000-1365210:-1:exon
so has part: feature:1361463-1361564:-1:exon
so has part: feature:1360137-1360331:-1:exon
so has part: feature:1356612-1356812:-1:exon
so has part: feature:1337028-1337213:-1:exon
so has part: feature:1335881-1335904:-1:exon
so has part: feature:1333880-1334026:-1:exon
so has part: feature:1319937-1320153:-1:exon
so has part: feature:1312990-1313109:-1:exon
so has part: feature:1310980-1311241:-1:exon
so has part: feature:1307571-1307838:-1:exon
so has part: feature:1301855-1301998:-1:exon
so has part: feature:1296865-1297114:-1:exon
so has part: feature:1295906-1295926:-1:exon
so has part: feature:1291518-1291750:-1:exon
so has part: feature:1279721-1279875:-1:exon
so has part: feature:1261600-1261966:-1:exon
so has part: feature:1259298-1259808:-1:exon
so has part: feature:1250102-1250274:-1:exon
so has part: feature:1246287-1246522:-1:exon
so has part: feature:1239941-1240237:-1:exon
so has part: feature:1235470-1235857:-1:exon
so has part: feature:1233587-1234807:-1:exon
so has part: feature:1232936-1233078:-1:exon
so has part: feature:1230784-1231542:-1:exon

XP_032052239.1
type: Protein
SIO_000068: ncbiprotein

position:1230784:-1
position: 1230784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1480578:-1
position: 1480578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1480362-1480578:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1397167-1397407:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1383739-1383977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1372656-1372808:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1366667-1366866:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1365000-1365210:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1361463-1361564:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1360137-1360331:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1356612-1356812:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1337028-1337213:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1335881-1335904:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1333880-1334026:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1319937-1320153:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1312990-1313109:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1310980-1311241:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1307571-1307838:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1301855-1301998:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1296865-1297114:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1295906-1295926:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1291518-1291750:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1279721-1279875:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1261600-1261966:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1259298-1259808:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1250102-1250274:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1246287-1246522:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1239941-1240237:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1235470-1235857:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1233587-1234807:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1232936-1233078:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1230784-1231542:-1:exon

TENM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: TENM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: teneurin-1 isoform X4
translation: MEQMDCKPYQPLSKVKHEVDLTYTSSSDESEDGRKQRQSYDSRETLNEYSQELRLNYNSQSRKRKTIDQSTQDMPGSPHNQFTFRPLPPPPPPPHACTCTRKPPPAADTLQRRSMTTRSQPSPAAPTPPTSTQDSVHLHNSWVLNSNIPLETRHFLFKHGSGSSAIFSAASQNYPLTSNTVYSPPPRPLPRSTFSRPAFTFNKPYRCCNWKCTALSATAITVTLALLLAYVIAVHLFGLTWQLQPVEGQLYENGVSKGNRGTESVDTTYSPIGGKVSDKTEKKVFQKGRTIDTGEVEIGAQVMQMIPPGLFWRFQITIHHPMYLKFNISLAKDSLLGIYGRRNIPPTHTQFDFVKLMDGKQLIKQEPKNSEEPQQAPRNLILTSLQETGFIEYMDQGAWHMAFYNDGKKMEQVFVLTTAIEVLDDCSTNCNGNGECISGHCHCFPGFLGPDCAKDSCPVLCSGNGEYEKGHCVCRNGWKGPECDVPEEQCIDPTCFGHGTCIMGVCICVPGYKGEICEEEDCLDPMCSGHGVCVQGECHCSAGWGGVNCETSLPVCQEQCSGHGTFLLDAGLCSCEPQWTGSDCSTELCTLDCGSHGVCSRGICQCEEGWVGPTCEERTCHSHCAEHGQCKDGKCECSPGWEGDHCTIAHYLDAVRDGCPGLCYGNGRCTLDQNGWHCVCQVGWSGSGCNVVMEMVCGDNLDNDGDGLTDCVDPDCCQQNNCYASPLCQGSPDPLDLIQHSQPPFSQHPPRLFYDRIRFLIGKESTHVIPGDVSFESRRACVIRGQVLAIDGTPLVGVNVSFLHHNEYGYTISRQDGSFDLVAVGGISVTLVFDRSPFISEKRTLWLPWNRFIIVDKVVMQRTESDIPSCDISSFISPNPIVLPSPLTAFGGSCPERGTVIPELQVVQEEIPIPSSFVKLSYLSSRTPGYKTLLRMILTHATIPSGMTKVHLIVAVEGRLLQKWFPAAANLVYTFAWNKTDIYGQKVSGLAEAMVSVGYEYEKCPDFILWEKRTVTLQGFEMDASNLGGWSINKHHVLNPQSGIVHKGNGENMFISQQPPVISTVMGNGHQRSVSCSNCNGLALNSKLFAPVALASGPDGSLYIGDFNFVRRIFPSGNSIGILELRNRDTRHSTSPAHKYYLAVDPVSESLYLSDTNTRKIYKAKSLVETKDLAKNADVVAGTGDQCLPFDQSHCGDGGKASEASLNSPRGITVDKHGFIYFVDGTMIRKIDENGVITTIIGSNGLTSTQPLSCDSGMDITQVRLEWPTDLTVNPLDNSLYVLDNNIVLQISENRRVRIIAGRPIHCQVPGIDHFIISKVAIHSTLESARAIAVSHSGILYIAETDERKINRIQQVTTNGEISIIAGTPSDCDCKIDPNCDCFSGDGGYAKDAKLKAPSSLAVSPDDTLYVADLGNVRIRSVSRNKAHLSDTNMYEIASPADQELYQFTINGTHLHTLNLITRDYIYNFTYSSEGDIGTITSSNGNSVHIRRDTSGLPLWIVVPGGQVYWLTISSNGVLKRVYAQGYNLALMTYPGNTGLLATKSDENGWTTVYEYDSDGHLTNATFPTGEVSSFHSDVEKLTRVELDTSNRENVITATNFSATSTIYTLKQDNTQNIYRVSLDGSLRVTFASGMEITLNTEPHILAGVISPTLGKCNISLPGEHNSNLIEWRQRREQTKGNISTFERRLRAHNRNLLSIDFDHVTRTGKIYDDHRKFTLRIMYDQTGRPVLWSPISKYNEVNITYSHSGLVTYIQRGTWTEKMEYDPSGNIISRTWADGKIWSYTYLEKSVMLLLHSQRRYIFEYDQSDYLLSVTMPSMVRHALQTMLSVGYYRNIYTPPDSTAAFIQDITRDGRLLQTLYPGTGRRVLYKYTKQSRLSEILYDTTQVTFTYEESSGVIKTIHLMHDGFICTIRYRQTGPLISRQIFRFSEEGLVNARFDYSYNNFRVTSMQAMINETPLPIDLYRYVDVSGRTEQFGKFSVINYDLNQVITTTVMKHT…
SIO_010081: TENM1
subclass of: SO_0000673
so part of: TENM1
location: complement(join(1230784..1231542,1232936..1233078,1233587..1234807,1235470..1235857,1239941..1240237,1246287..1246522,1250102..1250274,1259298..1259808,1261600..1261966,1279721..1279875,1291518..1291750,1295906..1295926,1296865..1297114,1301855..1301998,1307571..1307838,1310980..1311241,1312990..1313109,1319937..1320153,1333880..1334026,1335881..1335904,1337028..1337213,1356612..1356812,1360137..1360331,1361463..1361564,1365000..1365210,1366667..1366866,1372656..1372808,1383739..1383977,1397167..1397407,1480362..1480578))
location: region:1230784-1480578:-1
so has part: feature:1480362-1480578:-1:exon
so has part: feature:1397167-1397407:-1:exon
so has part: feature:1383739-1383977:-1:exon
so has part: feature:1372656-1372808:-1:exon
so has part: feature:1366667-1366866:-1:exon
so has part: feature:1365000-1365210:-1:exon
so has part: feature:1361463-1361564:-1:exon
so has part: feature:1360137-1360331:-1:exon
so has part: feature:1356612-1356812:-1:exon
so has part: feature:1337028-1337213:-1:exon
so has part: feature:1335881-1335904:-1:exon
so has part: feature:1333880-1334026:-1:exon
so has part: feature:1319937-1320153:-1:exon
so has part: feature:1312990-1313109:-1:exon
so has part: feature:1310980-1311241:-1:exon
so has part: feature:1307571-1307838:-1:exon
so has part: feature:1301855-1301998:-1:exon
so has part: feature:1296865-1297114:-1:exon
so has part: feature:1295906-1295926:-1:exon
so has part: feature:1291518-1291750:-1:exon
so has part: feature:1279721-1279875:-1:exon
so has part: feature:1261600-1261966:-1:exon
so has part: feature:1259298-1259808:-1:exon
so has part: feature:1250102-1250274:-1:exon
so has part: feature:1246287-1246522:-1:exon
so has part: feature:1239941-1240237:-1:exon
so has part: feature:1235470-1235857:-1:exon
so has part: feature:1233587-1234807:-1:exon
so has part: feature:1232936-1233078:-1:exon
so has part: feature:1230784-1231542:-1:exon

XP_032052240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1480362-1480578:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1397167-1397407:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1383739-1383977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1372656-1372808:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1366667-1366866:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1365000-1365210:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1361463-1361564:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1360137-1360331:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1356612-1356812:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1337028-1337213:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1335881-1335904:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1333880-1334026:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1319937-1320153:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1312990-1313109:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1310980-1311241:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1307571-1307838:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1301855-1301998:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1296865-1297114:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1295906-1295926:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1291518-1291750:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1279721-1279875:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1261600-1261966:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1259298-1259808:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1250102-1250274:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1246287-1246522:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1239941-1240237:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1235470-1235857:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1233587-1234807:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1232936-1233078:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1230784-1231542:-1:exon

TENM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: TENM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: teneurin-1 isoform X4
translation: MEQMDCKPYQPLSKVKHEVDLTYTSSSDESEDGRKQRQSYDSRETLNEYSQELRLNYNSQSRKRKTIDQSTQDMPGSPHNQFTFRPLPPPPPPPHACTCTRKPPPAADTLQRRSMTTRSQPSPAAPTPPTSTQDSVHLHNSWVLNSNIPLETRHFLFKHGSGSSAIFSAASQNYPLTSNTVYSPPPRPLPRSTFSRPAFTFNKPYRCCNWKCTALSATAITVTLALLLAYVIAVHLFGLTWQLQPVEGQLYENGVSKGNRGTESVDTTYSPIGGKVSDKTEKKVFQKGRTIDTGEVEIGAQVMQMIPPGLFWRFQITIHHPMYLKFNISLAKDSLLGIYGRRNIPPTHTQFDFVKLMDGKQLIKQEPKNSEEPQQAPRNLILTSLQETGFIEYMDQGAWHMAFYNDGKKMEQVFVLTTAIEVLDDCSTNCNGNGECISGHCHCFPGFLGPDCAKDSCPVLCSGNGEYEKGHCVCRNGWKGPECDVPEEQCIDPTCFGHGTCIMGVCICVPGYKGEICEEEDCLDPMCSGHGVCVQGECHCSAGWGGVNCETSLPVCQEQCSGHGTFLLDAGLCSCEPQWTGSDCSTELCTLDCGSHGVCSRGICQCEEGWVGPTCEERTCHSHCAEHGQCKDGKCECSPGWEGDHCTIAHYLDAVRDGCPGLCYGNGRCTLDQNGWHCVCQVGWSGSGCNVVMEMVCGDNLDNDGDGLTDCVDPDCCQQNNCYASPLCQGSPDPLDLIQHSQPPFSQHPPRLFYDRIRFLIGKESTHVIPGDVSFESRRACVIRGQVLAIDGTPLVGVNVSFLHHNEYGYTISRQDGSFDLVAVGGISVTLVFDRSPFISEKRTLWLPWNRFIIVDKVVMQRTESDIPSCDISSFISPNPIVLPSPLTAFGGSCPERGTVIPELQVVQEEIPIPSSFVKLSYLSSRTPGYKTLLRMILTHATIPSGMTKVHLIVAVEGRLLQKWFPAAANLVYTFAWNKTDIYGQKVSGLAEAMVSVGYEYEKCPDFILWEKRTVTLQGFEMDASNLGGWSINKHHVLNPQSGIVHKGNGENMFISQQPPVISTVMGNGHQRSVSCSNCNGLALNSKLFAPVALASGPDGSLYIGDFNFVRRIFPSGNSIGILELRNRDTRHSTSPAHKYYLAVDPVSESLYLSDTNTRKIYKAKSLVETKDLAKNADVVAGTGDQCLPFDQSHCGDGGKASEASLNSPRGITVDKHGFIYFVDGTMIRKIDENGVITTIIGSNGLTSTQPLSCDSGMDITQVRLEWPTDLTVNPLDNSLYVLDNNIVLQISENRRVRIIAGRPIHCQVPGIDHFIISKVAIHSTLESARAIAVSHSGILYIAETDERKINRIQQVTTNGEISIIAGTPSDCDCKIDPNCDCFSGDGGYAKDAKLKAPSSLAVSPDDTLYVADLGNVRIRSVSRNKAHLSDTNMYEIASPADQELYQFTINGTHLHTLNLITRDYIYNFTYSSEGDIGTITSSNGNSVHIRRDTSGLPLWIVVPGGQVYWLTISSNGVLKRVYAQGYNLALMTYPGNTGLLATKSDENGWTTVYEYDSDGHLTNATFPTGEVSSFHSDVEKLTRVELDTSNRENVITATNFSATSTIYTLKQDNTQNIYRVSLDGSLRVTFASGMEITLNTEPHILAGVISPTLGKCNISLPGEHNSNLIEWRQRREQTKGNISTFERRLRAHNRNLLSIDFDHVTRTGKIYDDHRKFTLRIMYDQTGRPVLWSPISKYNEVNITYSHSGLVTYIQRGTWTEKMEYDPSGNIISRTWADGKIWSYTYLEKSVMLLLHSQRRYIFEYDQSDYLLSVTMPSMVRHALQTMLSVGYYRNIYTPPDSTAAFIQDITRDGRLLQTLYPGTGRRVLYKYTKQSRLSEILYDTTQVTFTYEESSGVIKTIHLMHDGFICTIRYRQTGPLISRQIFRFSEEGLVNARFDYSYNNFRVTSMQAMINETPLPIDLYRYVDVSGRTEQFGKFSVINYDLNQVITTTVMKHT…
SIO_010081: TENM1
subclass of: SO_0000673
so part of: TENM1
location: complement(join(1230784..1231542,1232936..1233078,1233587..1234807,1235470..1235857,1239941..1240237,1246287..1246522,1250102..1250274,1259298..1259808,1261600..1261966,1279721..1279875,1291518..1291750,1295906..1295926,1296865..1297114,1301855..1301998,1307571..1307838,1310980..1311241,1312990..1313109,1319937..1320153,1333880..1334026,1335881..1335904,1337028..1337213,1356612..1356812,1360137..1360331,1361463..1361564,1365000..1365210,1366667..1366866,1372656..1372808,1383739..1383977,1397167..1397407,1480362..1480578))
location: region:1230784-1480578:-1
so has part: feature:1480362-1480578:-1:exon
so has part: feature:1397167-1397407:-1:exon
so has part: feature:1383739-1383977:-1:exon
so has part: feature:1372656-1372808:-1:exon
so has part: feature:1366667-1366866:-1:exon
so has part: feature:1365000-1365210:-1:exon
so has part: feature:1361463-1361564:-1:exon
so has part: feature:1360137-1360331:-1:exon
so has part: feature:1356612-1356812:-1:exon
so has part: feature:1337028-1337213:-1:exon
so has part: feature:1335881-1335904:-1:exon
so has part: feature:1333880-1334026:-1:exon
so has part: feature:1319937-1320153:-1:exon
so has part: feature:1312990-1313109:-1:exon
so has part: feature:1310980-1311241:-1:exon
so has part: feature:1307571-1307838:-1:exon
so has part: feature:1301855-1301998:-1:exon
so has part: feature:1296865-1297114:-1:exon
so has part: feature:1295906-1295926:-1:exon
so has part: feature:1291518-1291750:-1:exon
so has part: feature:1279721-1279875:-1:exon
so has part: feature:1261600-1261966:-1:exon
so has part: feature:1259298-1259808:-1:exon
so has part: feature:1250102-1250274:-1:exon
so has part: feature:1246287-1246522:-1:exon
so has part: feature:1239941-1240237:-1:exon
so has part: feature:1235470-1235857:-1:exon
so has part: feature:1233587-1234807:-1:exon
so has part: feature:1232936-1233078:-1:exon
so has part: feature:1230784-1231542:-1:exon

XP_032052242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1480362-1480578:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1397167-1397407:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1383739-1383977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1372656-1372808:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1366667-1366866:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1365000-1365210:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1361463-1361564:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1360137-1360331:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1356612-1356812:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1337028-1337213:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1335881-1335904:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1333880-1334026:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1319937-1320153:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1312990-1313109:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1310980-1311241:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1307571-1307838:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1301855-1301998:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1296865-1297114:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1295906-1295926:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1291518-1291750:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1279721-1279875:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1261600-1261966:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1259298-1259808:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1250102-1250274:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1246287-1246522:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1239941-1240237:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1235470-1235857:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1233587-1234807:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1232936-1233078:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1230784-1231542:-1:exon

TENM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: TENM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: teneurin-1 isoform X4
translation: MEQMDCKPYQPLSKVKHEVDLTYTSSSDESEDGRKQRQSYDSRETLNEYSQELRLNYNSQSRKRKTIDQSTQDMPGSPHNQFTFRPLPPPPPPPHACTCTRKPPPAADTLQRRSMTTRSQPSPAAPTPPTSTQDSVHLHNSWVLNSNIPLETRHFLFKHGSGSSAIFSAASQNYPLTSNTVYSPPPRPLPRSTFSRPAFTFNKPYRCCNWKCTALSATAITVTLALLLAYVIAVHLFGLTWQLQPVEGQLYENGVSKGNRGTESVDTTYSPIGGKVSDKTEKKVFQKGRTIDTGEVEIGAQVMQMIPPGLFWRFQITIHHPMYLKFNISLAKDSLLGIYGRRNIPPTHTQFDFVKLMDGKQLIKQEPKNSEEPQQAPRNLILTSLQETGFIEYMDQGAWHMAFYNDGKKMEQVFVLTTAIEVLDDCSTNCNGNGECISGHCHCFPGFLGPDCAKDSCPVLCSGNGEYEKGHCVCRNGWKGPECDVPEEQCIDPTCFGHGTCIMGVCICVPGYKGEICEEEDCLDPMCSGHGVCVQGECHCSAGWGGVNCETSLPVCQEQCSGHGTFLLDAGLCSCEPQWTGSDCSTELCTLDCGSHGVCSRGICQCEEGWVGPTCEERTCHSHCAEHGQCKDGKCECSPGWEGDHCTIAHYLDAVRDGCPGLCYGNGRCTLDQNGWHCVCQVGWSGSGCNVVMEMVCGDNLDNDGDGLTDCVDPDCCQQNNCYASPLCQGSPDPLDLIQHSQPPFSQHPPRLFYDRIRFLIGKESTHVIPGDVSFESRRACVIRGQVLAIDGTPLVGVNVSFLHHNEYGYTISRQDGSFDLVAVGGISVTLVFDRSPFISEKRTLWLPWNRFIIVDKVVMQRTESDIPSCDISSFISPNPIVLPSPLTAFGGSCPERGTVIPELQVVQEEIPIPSSFVKLSYLSSRTPGYKTLLRMILTHATIPSGMTKVHLIVAVEGRLLQKWFPAAANLVYTFAWNKTDIYGQKVSGLAEAMVSVGYEYEKCPDFILWEKRTVTLQGFEMDASNLGGWSINKHHVLNPQSGIVHKGNGENMFISQQPPVISTVMGNGHQRSVSCSNCNGLALNSKLFAPVALASGPDGSLYIGDFNFVRRIFPSGNSIGILELRNRDTRHSTSPAHKYYLAVDPVSESLYLSDTNTRKIYKAKSLVETKDLAKNADVVAGTGDQCLPFDQSHCGDGGKASEASLNSPRGITVDKHGFIYFVDGTMIRKIDENGVITTIIGSNGLTSTQPLSCDSGMDITQVRLEWPTDLTVNPLDNSLYVLDNNIVLQISENRRVRIIAGRPIHCQVPGIDHFIISKVAIHSTLESARAIAVSHSGILYIAETDERKINRIQQVTTNGEISIIAGTPSDCDCKIDPNCDCFSGDGGYAKDAKLKAPSSLAVSPDDTLYVADLGNVRIRSVSRNKAHLSDTNMYEIASPADQELYQFTINGTHLHTLNLITRDYIYNFTYSSEGDIGTITSSNGNSVHIRRDTSGLPLWIVVPGGQVYWLTISSNGVLKRVYAQGYNLALMTYPGNTGLLATKSDENGWTTVYEYDSDGHLTNATFPTGEVSSFHSDVEKLTRVELDTSNRENVITATNFSATSTIYTLKQDNTQNIYRVSLDGSLRVTFASGMEITLNTEPHILAGVISPTLGKCNISLPGEHNSNLIEWRQRREQTKGNISTFERRLRAHNRNLLSIDFDHVTRTGKIYDDHRKFTLRIMYDQTGRPVLWSPISKYNEVNITYSHSGLVTYIQRGTWTEKMEYDPSGNIISRTWADGKIWSYTYLEKSVMLLLHSQRRYIFEYDQSDYLLSVTMPSMVRHALQTMLSVGYYRNIYTPPDSTAAFIQDITRDGRLLQTLYPGTGRRVLYKYTKQSRLSEILYDTTQVTFTYEESSGVIKTIHLMHDGFICTIRYRQTGPLISRQIFRFSEEGLVNARFDYSYNNFRVTSMQAMINETPLPIDLYRYVDVSGRTEQFGKFSVINYDLNQVITTTVMKHT…
SIO_010081: TENM1
subclass of: SO_0000673
so part of: TENM1
location: complement(join(1230784..1231542,1232936..1233078,1233587..1234807,1235470..1235857,1239941..1240237,1246287..1246522,1250102..1250274,1259298..1259808,1261600..1261966,1279721..1279875,1291518..1291750,1295906..1295926,1296865..1297114,1301855..1301998,1307571..1307838,1310980..1311241,1312990..1313109,1319937..1320153,1333880..1334026,1335881..1335904,1337028..1337213,1356612..1356812,1360137..1360331,1361463..1361564,1365000..1365210,1366667..1366866,1372656..1372808,1383739..1383977,1397167..1397407,1480362..1480578))
location: region:1230784-1480578:-1
so has part: feature:1480362-1480578:-1:exon
so has part: feature:1397167-1397407:-1:exon
so has part: feature:1383739-1383977:-1:exon
so has part: feature:1372656-1372808:-1:exon
so has part: feature:1366667-1366866:-1:exon
so has part: feature:1365000-1365210:-1:exon
so has part: feature:1361463-1361564:-1:exon
so has part: feature:1360137-1360331:-1:exon
so has part: feature:1356612-1356812:-1:exon
so has part: feature:1337028-1337213:-1:exon
so has part: feature:1335881-1335904:-1:exon
so has part: feature:1333880-1334026:-1:exon
so has part: feature:1319937-1320153:-1:exon
so has part: feature:1312990-1313109:-1:exon
so has part: feature:1310980-1311241:-1:exon
so has part: feature:1307571-1307838:-1:exon
so has part: feature:1301855-1301998:-1:exon
so has part: feature:1296865-1297114:-1:exon
so has part: feature:1295906-1295926:-1:exon
so has part: feature:1291518-1291750:-1:exon
so has part: feature:1279721-1279875:-1:exon
so has part: feature:1261600-1261966:-1:exon
so has part: feature:1259298-1259808:-1:exon
so has part: feature:1250102-1250274:-1:exon
so has part: feature:1246287-1246522:-1:exon
so has part: feature:1239941-1240237:-1:exon
so has part: feature:1235470-1235857:-1:exon
so has part: feature:1233587-1234807:-1:exon
so has part: feature:1232936-1233078:-1:exon
so has part: feature:1230784-1231542:-1:exon

XP_032052243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1480362-1480578:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1397167-1397407:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1383739-1383977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1372656-1372808:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1366667-1366866:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1365000-1365210:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1361463-1361564:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1360137-1360331:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1356612-1356812:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1337028-1337213:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1335881-1335904:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1333880-1334026:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1319937-1320153:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1312990-1313109:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1310980-1311241:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1307571-1307838:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1301855-1301998:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1296865-1297114:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1295906-1295926:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1291518-1291750:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1279721-1279875:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1261600-1261966:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1259298-1259808:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1250102-1250274:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1246287-1246522:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1239941-1240237:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1235470-1235857:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1233587-1234807:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1232936-1233078:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1230784-1231542:-1:exon

TENM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: TENM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: teneurin-1 isoform X6
translation: MEQMDCKPYQPLSKVKHEVDLTYTSSSDESEDGRKQRQSYDSRETLNEYSQELRLNYNSQSRKRKTIDQSTQDMEFCETPHILCSGYQTDLHGVSEHSYPLEVGSDVDTETEGGASPDHALRMWMRGVKSEHSSCLSSRANSALSLTDTDHERKSDGENDMPGSPHNQFTFRPLPPPPPPPHACTCTRKPPPAADTLQRRSMTTRSQPSPAAPTPPTSTQDSVHLHNSWVLNSNIPLETRHFLFKHGSGSSAIFSAASQNYPLTSNTVYSPPPRPLPRSTFSRPAFTFNKPYRCCNWKCTALSATAITVTLALLLAYVIAVHLFGLTWQLQPVEGQLYENGVSKGNRGTESVDTTYSPIGGKVSDKTEKKVFQKGRTIDTGEVEIGAQVMQMIPPGLFWRFQITIHHPMYLKFNISLAKDSLLGIYGRRNIPPTHTQFDFVKLMDGKQLIKQEPKNSEEPQQAPRNLILTSLQETGFIEYMDQGAWHMAFYNDGKKMEQVFVLTTAIEVLDDCSTNCNGNGECISGHCHCFPGFLGPDCAKDSCPVLCSGNGEYEKGHCVCRNGWKGPECDVPEEQCIDPTCFGHGTCIMGVCICVPGYKGEICEEEDCLDPMCSGHGVCVQGECHCSAGWGGVNCETSLPVCQEQCSGHGTFLLDAGLCSCEPQWTGSDCSTELCTLDCGSHGVCSRGICQCEEGWVGPTCEERTCHSHCAEHGQCKDGKCECSPGWEGDHCTIAHYLDAVRDGCPGLCYGNGRCTLDQNGWHCVCQVGWSGSGCNVVMEMVCGDNLDNDGDGLTDCVDPDCCQQNNCYASPLCQGSPDPLDLIQHSQPPFSQHPPRLFYDRIRFLIGKESTHVIPGDVSFESRRACVIRGQVLAIDGTPLVGVNVSFLHHNEYGYTISRQDGSFDLVAVGGISVTLVFDRSPFISEKRTLWLPWNRFIIVDKVVMQRTESDIPSCDISSFISPNPIVLPSPLTAFGGSCPERGTVIPELQVVQEEIPIPSSFVKLSYLSSRTPGYKTLLRMILTHATIPSGMTKVHLIVAVEGRLLQKWFPAAANLVYTFAWNKTDIYGQKVSGLAEAMVSVGYEYEKCPDFILWEKRTVTLQGFEMDASNLGGWSINKHHVLNPQSGIVHKGNGENMFISQQPPVISTVMGNGHQRSVSCSNCNGLALNSKLFAPVALASGPDGSLYIGDFNFVRRIFPSGNSIGILELRNRDTRHSTSPAHKYYLAVDPVSESLYLSDTNTRKIYKAKSLVETKDLAKNADVVAGTGDQCLPFDQSHCGDGGKASEASLNSPRGITVDKHGFIYFVDGTMIRKIDENGVITTIIGSNGLTSTQPLSCDSGMDITQVRLEWPTDLTVNPLDNSLYVLDNNIVLQISENRRVRIIAGRPIHCQVPGIDHFIISKVAIHSTLESARAIAVSHSGILYIAETDERKINRIQQVTTNGEISIIAGTPSDCDCKIDPNCDCFSGDGGYAKDAKLKAPSSLAVSPDDTLYVADLGNVRIRSVSRNKAHLSDTNMYEIASPADQELYQFTINGTHLHTLNLITRDYIYNFTYSSEGDIGTITSSNGNSVHIRRDTSGLPLWIVVPGGQVYWLTISSNGVLKRVYAQGYNLALMTYPGNTGLLATKSDENGWTTVYEYDSDGHLTNATFPTGEVSSFHSDVEKLTRVELDTSNRENVITATNFSATSTIYTLKQDNTQNIYRVSLDGSLRVTFASGMEITLNTEPHILAGVISPTLGKCNISLPGEHNSNLIEWRQRREQTKGNISTFERRLRAHNRNLLSIDFDHVTRTGKIYDDHRKFTLRIMYDQTGRPVLWSPISKYNEVNITYSHSGLVTYIQRGTWTEKMEYDPSGNIISRTWADGKIWSYTYLEKSVMLLLHSQRRYIFEYDQSDYLLSVTMPSMVRHALQTMLSVGYYRNIYTPPDSTAAFIQDITRDGRLLQTLYPGTGRRVLYKYTKQSRLSEILYDTTQVTFTYEESSGVIKTIHLMHDGFICT…
SIO_010081: TENM1
subclass of: SO_0000673
so part of: TENM1
location: complement(join(1230784..1231542,1232936..1233078,1233587..1234807,1235470..1235857,1239941..1240237,1246287..1246522,1250102..1250274,1259298..1259808,1261600..1261966,1279721..1279875,1291518..1291750,1295906..1295926,1296865..1297114,1301855..1301998,1307571..1307838,1310980..1311241,1312990..1313109,1319937..1320153,1333880..1334026,1335881..1335904,1337028..1337213,1356612..1356812,1360137..1360331,1361463..1361564,1365000..1365210,1366667..1366866,1372656..1372808,1383739..1383977,1397167..1397407,1452237..1452497,1480362..1480578))
location: region:1230784-1480578:-1
so has part: feature:1480362-1480578:-1:exon
so has part: feature:1452237-1452497:-1:exon
so has part: feature:1397167-1397407:-1:exon
so has part: feature:1383739-1383977:-1:exon
so has part: feature:1372656-1372808:-1:exon
so has part: feature:1366667-1366866:-1:exon
so has part: feature:1365000-1365210:-1:exon
so has part: feature:1361463-1361564:-1:exon
so has part: feature:1360137-1360331:-1:exon
so has part: feature:1356612-1356812:-1:exon
so has part: feature:1337028-1337213:-1:exon
so has part: feature:1335881-1335904:-1:exon
so has part: feature:1333880-1334026:-1:exon
so has part: feature:1319937-1320153:-1:exon
so has part: feature:1312990-1313109:-1:exon
so has part: feature:1310980-1311241:-1:exon
so has part: feature:1307571-1307838:-1:exon
so has part: feature:1301855-1301998:-1:exon
so has part: feature:1296865-1297114:-1:exon
so has part: feature:1295906-1295926:-1:exon
so has part: feature:1291518-1291750:-1:exon
so has part: feature:1279721-1279875:-1:exon
so has part: feature:1261600-1261966:-1:exon
so has part: feature:1259298-1259808:-1:exon
so has part: feature:1250102-1250274:-1:exon
so has part: feature:1246287-1246522:-1:exon
so has part: feature:1239941-1240237:-1:exon
so has part: feature:1235470-1235857:-1:exon
so has part: feature:1233587-1234807:-1:exon
so has part: feature:1232936-1233078:-1:exon
so has part: feature:1230784-1231542:-1:exon

XP_032052245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1480362-1480578:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1452237-1452497:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1397167-1397407:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1383739-1383977:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1372656-1372808:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1366667-1366866:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1365000-1365210:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1361463-1361564:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1360137-1360331:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1356612-1356812:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1337028-1337213:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1335881-1335904:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1333880-1334026:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1319937-1320153:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1312990-1313109:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1310980-1311241:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1307571-1307838:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1301855-1301998:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1296865-1297114:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1295906-1295926:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1291518-1291750:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1279721-1279875:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1261600-1261966:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1259298-1259808:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1250102-1250274:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1246287-1246522:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1239941-1240237:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1235470-1235857:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1233587-1234807:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1232936-1233078:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1230784-1231542:-1:exon

TENM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: TENM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: teneurin-1 isoform X2
translation: MEFCETPHILCSGYQTDLHGVSEHSYPLEVGSDVDTETEGGASPDHALRMWMRGVKSEHSSCLSSRANSALSLTDTDHERKSDGENDMPGSPHNQFTFRPLPPPPPPPHACTCTRKPPPAADTLQRRSMTTRSQPSPAAPTPPTSTQDSVHLHNSWVLNSNIPLETRHFLFKHGSGSSAIFSAASQNYPLTSNTVYSPPPRPLPRSTFSRPAFTFNKPYRCCNWKCTALSATAITVTLALLLAYVIVHLFGLTWQLQPVEGQLYENGVSKGNRGTESVDTTYSPIGGKVSDKTEKKVFQKGRTIDTGEVEIGAQVMQMIPPGLFWRFQITIHHPMYLKFNISLAKDSLLGIYGRRNIPPTHTQFDFVKLMDGKQLIKQEPKNSEEPQQAPRNLILTSLQETGFIEYMDQGAWHMAFYNDGKKMEQVFVLTTAIEVLDDCSTNCNGNGECISGHCHCFPGFLGPDCAKDSCPVLCSGNGEYEKGHCVCRNGWKGPECDVPEEQCIDPTCFGHGTCIMGVCICVPGYKGEICEEEDCLDPMCSGHGVCVQGECHCSAGWGGVNCETSLPVCQEQCSGHGTFLLDAGLCSCEPQWTGSDCSTELCTLDCGSHGVCSRGICQCEEGWVGPTCEERTCHSHCAEHGQCKDGKCECSPGWEGDHCTIAHYLDAVRDGCPGLCYGNGRCTLDQNGWHCVCQVGWSGSGCNVVMEMVCGDNLDNDGDGLTDCVDPDCCQQNNCYASPLCQGSPDPLDLIQHSQPPFSQHPPRLFYDRIRFLIGKESTHVIPGDVSFESRRACVIRGQVLAIDGTPLVGVNVSFLHHNEYGYTISRQDGSFDLVAVGGISVTLVFDRSPFISEKRTLWLPWNRFIIVDKVVMQRTESDIPSCDISSFISPNPIVLPSPLTAFGGSCPERGTVIPELQVVQEEIPIPSSFVKLSYLSSRTPGYKTLLRMILTHATIPSGMTKVHLIVAVEGRLLQKWFPAAANLVYTFAWNKTDIYGQKVSGLAEAMVSVGYEYEKCPDFILWEKRTVTLQGFEMDASNLGGWSINKHHVLNPQSGIVHKGNGENMFISQQPPVISTVMGNGHQRSVSCSNCNGLALNSKLFAPVALASGPDGSLYIGDFNFVRRIFPSGNSIGILELRNRDTRHSTSPAHKYYLAVDPVSESLYLSDTNTRKIYKAKSLVETKDLAKNADVVAGTGDQCLPFDQSHCGDGGKASEASLNSPRGITVDKHGFIYFVDGTMIRKIDENGVITTIIGSNGLTSTQPLSCDSGMDITQVRLEWPTDLTVNPLDNSLYVLDNNIVLQISENRRVRIIAGRPIHCQVPGIDHFIISKVAIHSTLESARAIAVSHSGILYIAETDERKINRIQQVTTNGEISIIAGTPSDCDCKIDPNCDCFSGDGGYAKDAKLKAPSSLAVSPDDTLYVADLGNVRIRSVSRNKAHLSDTNMYEIASPADQELYQFTINGTHLHTLNLITRDYIYNFTYSSEGDIGTITSSNGNSVHIRRDTSGLPLWIVVPGGQVYWLTISSNGVLKRVYAQGYNLALMTYPGNTGLLATKSDENGWTTVYEYDSDGHLTNATFPTGEVSSFHSDVEKLTRVELDTSNRENVITATNFSATSTIYTLKQDNTQNIYRVSLDGSLRVTFASGMEITLNTEPHILAGVISPTLGKCNISLPGEHNSNLIEWRQRREQTKGNISTFERRLRAHNRNLLSIDFDHVTRTGKIYDDHRKFTLRIMYDQTGRPVLWSPISKYNEVNITYSHSGLVTYIQRGTWTEKMEYDPSGNIISRTWADGKIWSYTYLEKSVMLLLHSQRRYIFEYDQSDYLLSVTMPSMVRHALQTMLSVGYYRNIYTPPDSTAAFIQDITRDGRLLQTLYPGTGRRVLYKYTKQSRLSEILYDTTQVTFTYEESSGVIKTIHLMHDGFICTIRYRQTGPLISRQIFRFSEEGLVNARFDYSYNNFRVTSMQAMINETPLPIDLYRYVDVSGRTEQFGKFSVINYD…
SIO_010081: TENM1
subclass of: SO_0000673
so part of: TENM1
location: complement(join(1230784..1231542,1232936..1233078,1233587..1234807,1235470..1235857,1239941..1240237,1246287..1246522,1250102..1250274,1259298..1259808,1261600..1261966,1279721..1279875,1291518..1291750,1295906..1295926,1296865..1297114,1301855..1301998,1307571..1307838,1310980..1311241,1312990..1313109,1319937..1320153,1333880..1334026,1335881..1335904,1337028..1337213,1356612..1356812,1360137..1360331,1361463..1361564,1365000..1365210,1366667..1366866,1372656..1372805,1383739..1383977,1397167..1397407,1452237..1452495))
location: region:1230784-1452495:-1
so has part: feature:1452237-1452495:-1:exon
so has part: feature:1397167-1397407:-1:exon
so has part: feature:1383739-1383977:-1:exon
so has part: feature:1372656-1372805:-1:exon
so has part: feature:1366667-1366866:-1:exon
so has part: feature:1365000-1365210:-1:exon
so has part: feature:1361463-1361564:-1:exon
so has part: feature:1360137-1360331:-1:exon
so has part: feature:1356612-1356812:-1:exon
so has part: feature:1337028-1337213:-1:exon
so has part: feature:1335881-1335904:-1:exon
so has part: feature:1333880-1334026:-1:exon
so has part: feature:1319937-1320153:-1:exon
so has part: feature:1312990-1313109:-1:exon
so has part: feature:1310980-1311241:-1:exon
so has part: feature:1307571-1307838:-1:exon
so has part: feature:1301855-1301998:-1:exon
so has part: feature:1296865-1297114:-1:exon
so has part: feature:1295906-1295926:-1:exon
so has part: feature:1291518-1291750:-1:exon
so has part: feature:1279721-1279875:-1:exon
so has part: feature:1261600-1261966:-1:exon
so has part: feature:1259298-1259808:-1:exon
so has part: feature:1250102-1250274:-1:exon
so has part: feature:1246287-1246522:-1:exon
so has part: feature:1239941-1240237:-1:exon
so has part: feature:1235470-1235857:-1:exon
so has part: feature:1233587-1234807:-1:exon
so has part: feature:1232936-1233078:-1:exon
so has part: feature:1230784-1231542:-1:exon

XP_032052237.1
type: Protein
SIO_000068: ncbiprotein

position:1452495:-1
position: 1452495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1452237-1452495:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1397167-1397407:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1383739-1383977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1372656-1372805:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1366667-1366866:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1365000-1365210:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1361463-1361564:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1360137-1360331:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1356612-1356812:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1337028-1337213:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1335881-1335904:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1333880-1334026:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1319937-1320153:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1312990-1313109:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1310980-1311241:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1307571-1307838:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1301855-1301998:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1296865-1297114:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1295906-1295926:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1291518-1291750:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1279721-1279875:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1261600-1261966:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1259298-1259808:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1250102-1250274:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1246287-1246522:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1239941-1240237:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1235470-1235857:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1233587-1234807:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1232936-1233078:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1230784-1231542:-1:exon

TENM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: TENM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: teneurin-1 isoform X5
translation: MEFCETPHILCSGYQTDLHGVSEHSYPLEVGSDVDTETEGGASPDHALRMWMRGVKSEHSSCLSSRANSALSLTDTDHERKSDGENDMPGSPHNQFTFRPLPPPPPPPHACTCTRKPPPAADTLQRRSMTTRSQPSPAAPTPPTSTQDSVHLHNSWVLNSNIPLETRHFLFKHGSGSSAIFSAASQNYPLTSNTVYSPPPRPLPRSTFSRPAFTFNKPYRCCNWKCTALSATAITVTLALLLAYVIAVHLFGLTWQLQPVEGQLYENGVSKGNRGTESVDTTYSPIGGKVSDKTEKKVFQKGRTIDTGEVEIGAQVMQMIPPGLFWRFQITIHHPMYLKFNISLAKDSLLGIYGRRNIPPTHTQFDFVKLMDGKQLIKQEPKNSEEPQQAPRNLILTSLQETGFIEYMDQGAWHMAFYNDGKKMEQVFVLTTAIEVLDDCSTNCNGNGECISGHCHCFPGFLGPDCAKDSCPVLCSGNGEYEKGHCVCRNGWKGPECDVPEEQCIDPTCFGHGTCIMGVCICVPGYKGEICEEEDCLDPMCSGHGVCVQGECHCSAGWGGVNCETSLPVCQEQCSGHGTFLLDAGLCSCEPQWTGSDCSTELCTLDCGSHGVCSRGICQCEEGWVGPTCEERTCHSHCAEHGQCKDGKCECSPGWEGDHCTIDGLTDCVDPDCCQQNNCYASPLCQGSPDPLDLIQHSQPPFSQHPPRLFYDRIRFLIGKESTHVIPGDVSFESRRACVIRGQVLAIDGTPLVGVNVSFLHHNEYGYTISRQDGSFDLVAVGGISVTLVFDRSPFISEKRTLWLPWNRFIIVDKVVMQRTESDIPSCDISSFISPNPIVLPSPLTAFGGSCPERGTVIPELQVVQEEIPIPSSFVKLSYLSSRTPGYKTLLRMILTHATIPSGMTKVHLIVAVEGRLLQKWFPAAANLVYTFAWNKTDIYGQKVSGLAEAMVSVGYEYEKCPDFILWEKRTVTLQGFEMDASNLGGWSINKHHVLNPQSGIVHKGNGENMFISQQPPVISTVMGNGHQRSVSCSNCNGLALNSKLFAPVALASGPDGSLYIGDFNFVRRIFPSGNSIGILELRNRDTRHSTSPAHKYYLAVDPVSESLYLSDTNTRKIYKAKSLVETKDLAKNADVVAGTGDQCLPFDQSHCGDGGKASEASLNSPRGITVDKHGFIYFVDGTMIRKIDENGVITTIIGSNGLTSTQPLSCDSGMDITQVRLEWPTDLTVNPLDNSLYVLDNNIVLQISENRRVRIIAGRPIHCQVPGIDHFIISKVAIHSTLESARAIAVSHSGILYIAETDERKINRIQQVTTNGEISIIAGTPSDCDCKIDPNCDCFSGDGGYAKDAKLKAPSSLAVSPDDTLYVADLGNVRIRSVSRNKAHLSDTNMYEIASPADQELYQFTINGTHLHTLNLITRDYIYNFTYSSEGDIGTITSSNGNSVHIRRDTSGLPLWIVVPGGQVYWLTISSNGVLKRVYAQGYNLALMTYPGNTGLLATKSDENGWTTVYEYDSDGHLTNATFPTGEVSSFHSDVEKLTRVELDTSNRENVITATNFSATSTIYTLKQDNTQNIYRVSLDGSLRVTFASGMEITLNTEPHILAGVISPTLGKCNISLPGEHNSNLIEWRQRREQTKGNISTFERRLRAHNRNLLSIDFDHVTRTGKIYDDHRKFTLRIMYDQTGRPVLWSPISKYNEVNITYSHSGLVTYIQRGTWTEKMEYDPSGNIISRTWADGKIWSYTYLEKSVMLLLHSQRRYIFEYDQSDYLLSVTMPSMVRHALQTMLSVGYYRNIYTPPDSTAAFIQDITRDGRLLQTLYPGTGRRVLYKYTKQSRLSEILYDTTQVTFTYEESSGVIKTIHLMHDGFICTIRYRQTGPLISRQIFRFSEEGLVNARFDYSYNNFRVTSMQAMINETPLPIDLYRYVDVSGRTEQFGKFSVINYDLNQVITTTVMKHTKIFSANGQVIEVQYEILKSIAYWMTIQYDNMGRMVICDTRVGV…
SIO_010081: TENM1
subclass of: SO_0000673
so part of: TENM1
location: complement(join(1230784..1231542,1232936..1233078,1233587..1234807,1235470..1235857,1239941..1240237,1246287..1246522,1250102..1250274,1259298..1259808,1261600..1261966,1279721..1279875,1291518..1291750,1295906..1295926,1296865..1297114,1301855..1301998,1307571..1307838,1310980..1311241,1312990..1313109,1319937..1320153,1337028..1337213,1356612..1356812,1360137..1360331,1361463..1361564,1365000..1365210,1366667..1366866,1372656..1372808,1383739..1383977,1397167..1397407,1452237..1452495))
location: region:1230784-1452495:-1
so has part: feature:1452237-1452495:-1:exon
so has part: feature:1397167-1397407:-1:exon
so has part: feature:1383739-1383977:-1:exon
so has part: feature:1372656-1372808:-1:exon
so has part: feature:1366667-1366866:-1:exon
so has part: feature:1365000-1365210:-1:exon
so has part: feature:1361463-1361564:-1:exon
so has part: feature:1360137-1360331:-1:exon
so has part: feature:1356612-1356812:-1:exon
so has part: feature:1337028-1337213:-1:exon
so has part: feature:1319937-1320153:-1:exon
so has part: feature:1312990-1313109:-1:exon
so has part: feature:1310980-1311241:-1:exon
so has part: feature:1307571-1307838:-1:exon
so has part: feature:1301855-1301998:-1:exon
so has part: feature:1296865-1297114:-1:exon
so has part: feature:1295906-1295926:-1:exon
so has part: feature:1291518-1291750:-1:exon
so has part: feature:1279721-1279875:-1:exon
so has part: feature:1261600-1261966:-1:exon
so has part: feature:1259298-1259808:-1:exon
so has part: feature:1250102-1250274:-1:exon
so has part: feature:1246287-1246522:-1:exon
so has part: feature:1239941-1240237:-1:exon
so has part: feature:1235470-1235857:-1:exon
so has part: feature:1233587-1234807:-1:exon
so has part: feature:1232936-1233078:-1:exon
so has part: feature:1230784-1231542:-1:exon

XP_032052244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1452237-1452495:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1397167-1397407:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1383739-1383977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1372656-1372808:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1366667-1366866:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1365000-1365210:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1361463-1361564:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1360137-1360331:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1356612-1356812:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1337028-1337213:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1319937-1320153:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1312990-1313109:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1310980-1311241:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1307571-1307838:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1301855-1301998:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1296865-1297114:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1295906-1295926:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1291518-1291750:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1279721-1279875:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1261600-1261966:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1259298-1259808:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1250102-1250274:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1246287-1246522:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1239941-1240237:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1235470-1235857:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1233587-1234807:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1232936-1233078:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1230784-1231542:-1:exon

TENM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: TENM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: teneurin-1 isoform X3
translation: MEFCETPHILCSGYQTDLHGVSEHSYPLEVGSDVDTETEGGASPDHALRMWMRGVKSEHSSCLSSRANSALSLTDTDHERKSDGENDMPGSPHNQFTFRPLPPPPPPPHACTCTRKPPPAADTLQRRSMTTRSQPSPAAPTPPTSTQDSVHLHNSWVLNSNIPLETRHFLFKHGSGSSAIFSAASQNYPLTSNTVYSPPPRPLPRSTFSRPAFTFNKPYRCCNWKCTALSATAITVTLALLLAYVIAVHLFGLTWQLQPVEGQLYENGVSKGNRGTESVDTTYSPIGGKVSDKTEKKVFQKGRTIDTGEVEIGAQVMQMIPPGLFWRFQITIHHPMYLKFNISLAKDSLLGIYGRRNIPPTHTQFDFVKLMDGKQLIKQEPKNSEEPQQAPRNLILTSLQETGFIEYMDQGAWHMAFYNDGKKMEQVFVLTTAIEVLDDCSTNCNGNGECISGHCHCFPGFLGPDCAKDSCPVLCSGNGEYEKGHCVCRNGWKGPECDVPEEQCIDPTCFGHGTCIMGVCICVPGYKGEICEEEDCLDPMCSGHGVCVQGECHCSAGWGGVNCETSLPVCQEQCSGHGTFLLDAGLCSCEPQWTGSDCSTELCTLDCGSHGVCSRGICQCEEGWVGPTCEERTCHSHCAEHGQCKDGKCECSPGWEGDHCTIDGCPGLCYGNGRCTLDQNGWHCVCQVGWSGSGCNVVMEMVCGDNLDNDGDGLTDCVDPDCCQQNNCYASPLCQGSPDPLDLIQHSQPPFSQHPPRLFYDRIRFLIGKESTHVIPGDVSFESRRACVIRGQVLAIDGTPLVGVNVSFLHHNEYGYTISRQDGSFDLVAVGGISVTLVFDRSPFISEKRTLWLPWNRFIIVDKVVMQRTESDIPSCDISSFISPNPIVLPSPLTAFGGSCPERGTVIPELQVVQEEIPIPSSFVKLSYLSSRTPGYKTLLRMILTHATIPSGMTKVHLIVAVEGRLLQKWFPAAANLVYTFAWNKTDIYGQKVSGLAEAMVSVGYEYEKCPDFILWEKRTVTLQGFEMDASNLGGWSINKHHVLNPQSGIVHKGNGENMFISQQPPVISTVMGNGHQRSVSCSNCNGLALNSKLFAPVALASGPDGSLYIGDFNFVRRIFPSGNSIGILELRNRDTRHSTSPAHKYYLAVDPVSESLYLSDTNTRKIYKAKSLVETKDLAKNADVVAGTGDQCLPFDQSHCGDGGKASEASLNSPRGITVDKHGFIYFVDGTMIRKIDENGVITTIIGSNGLTSTQPLSCDSGMDITQVRLEWPTDLTVNPLDNSLYVLDNNIVLQISENRRVRIIAGRPIHCQVPGIDHFIISKVAIHSTLESARAIAVSHSGILYIAETDERKINRIQQVTTNGEISIIAGTPSDCDCKIDPNCDCFSGDGGYAKDAKLKAPSSLAVSPDDTLYVADLGNVRIRSVSRNKAHLSDTNMYEIASPADQELYQFTINGTHLHTLNLITRDYIYNFTYSSEGDIGTITSSNGNSVHIRRDTSGLPLWIVVPGGQVYWLTISSNGVLKRVYAQGYNLALMTYPGNTGLLATKSDENGWTTVYEYDSDGHLTNATFPTGEVSSFHSDVEKLTRVELDTSNRENVITATNFSATSTIYTLKQDNTQNIYRVSLDGSLRVTFASGMEITLNTEPHILAGVISPTLGKCNISLPGEHNSNLIEWRQRREQTKGNISTFERRLRAHNRNLLSIDFDHVTRTGKIYDDHRKFTLRIMYDQTGRPVLWSPISKYNEVNITYSHSGLVTYIQRGTWTEKMEYDPSGNIISRTWADGKIWSYTYLEKSVMLLLHSQRRYIFEYDQSDYLLSVTMPSMVRHALQTMLSVGYYRNIYTPPDSTAAFIQDITRDGRLLQTLYPGTGRRVLYKYTKQSRLSEILYDTTQVTFTYEESSGVIKTIHLMHDGFICTIRYRQTGPLISRQIFRFSEEGLVNARFDYSYNNFRVTSMQAMINETPLPIDLYRYVDVSGRTEQFGKFSVINYDLNQVITT…
SIO_010081: TENM1
subclass of: SO_0000673
so part of: TENM1
location: complement(join(1230784..1231542,1232936..1233078,1233587..1234807,1235470..1235857,1239941..1240237,1246287..1246522,1250102..1250274,1259298..1259808,1261600..1261966,1279721..1279875,1291518..1291750,1295906..1295926,1296865..1297114,1301855..1301998,1307571..1307838,1310980..1311241,1312990..1313109,1319937..1320153,1333880..1334026,1337028..1337213,1356612..1356812,1360137..1360331,1361463..1361564,1365000..1365210,1366667..1366866,1372656..1372808,1383739..1383977,1397167..1397407,1452237..1452495))
location: region:1230784-1452495:-1
so has part: feature:1452237-1452495:-1:exon
so has part: feature:1397167-1397407:-1:exon
so has part: feature:1383739-1383977:-1:exon
so has part: feature:1372656-1372808:-1:exon
so has part: feature:1366667-1366866:-1:exon
so has part: feature:1365000-1365210:-1:exon
so has part: feature:1361463-1361564:-1:exon
so has part: feature:1360137-1360331:-1:exon
so has part: feature:1356612-1356812:-1:exon
so has part: feature:1337028-1337213:-1:exon
so has part: feature:1333880-1334026:-1:exon
so has part: feature:1319937-1320153:-1:exon
so has part: feature:1312990-1313109:-1:exon
so has part: feature:1310980-1311241:-1:exon
so has part: feature:1307571-1307838:-1:exon
so has part: feature:1301855-1301998:-1:exon
so has part: feature:1296865-1297114:-1:exon
so has part: feature:1295906-1295926:-1:exon
so has part: feature:1291518-1291750:-1:exon
so has part: feature:1279721-1279875:-1:exon
so has part: feature:1261600-1261966:-1:exon
so has part: feature:1259298-1259808:-1:exon
so has part: feature:1250102-1250274:-1:exon
so has part: feature:1246287-1246522:-1:exon
so has part: feature:1239941-1240237:-1:exon
so has part: feature:1235470-1235857:-1:exon
so has part: feature:1233587-1234807:-1:exon
so has part: feature:1232936-1233078:-1:exon
so has part: feature:1230784-1231542:-1:exon

XP_032052238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1452237-1452495:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1397167-1397407:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1383739-1383977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1372656-1372808:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1366667-1366866:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1365000-1365210:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1361463-1361564:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1360137-1360331:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1356612-1356812:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1337028-1337213:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1333880-1334026:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1319937-1320153:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1312990-1313109:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1310980-1311241:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1307571-1307838:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1301855-1301998:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1296865-1297114:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1295906-1295926:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1291518-1291750:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1279721-1279875:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1261600-1261966:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1259298-1259808:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1250102-1250274:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1246287-1246522:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1239941-1240237:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1235470-1235857:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1233587-1234807:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1232936-1233078:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1230784-1231542:-1:exon

TENM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: TENM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: teneurin-1 isoform X1
translation: MEFCETPHILCSGYQTDLHGVSEHSYPLEVGSDVDTETEGGASPDHALRMWMRGVKSEHSSCLSSRANSALSLTDTDHERKSDGENDMPGSPHNQFTFRPLPPPPPPPHACTCTRKPPPAADTLQRRSMTTRSQPSPAAPTPPTSTQDSVHLHNSWVLNSNIPLETRHFLFKHGSGSSAIFSAASQNYPLTSNTVYSPPPRPLPRSTFSRPAFTFNKPYRCCNWKCTALSATAITVTLALLLAYVIAVHLFGLTWQLQPVEGQLYENGVSKGNRGTESVDTTYSPIGGKVSDKTEKKVFQKGRTIDTGEVEIGAQVMQMIPPGLFWRFQITIHHPMYLKFNISLAKDSLLGIYGRRNIPPTHTQFDFVKLMDGKQLIKQEPKNSEEPQQAPRNLILTSLQETGFIEYMDQGAWHMAFYNDGKKMEQVFVLTTAIEVLDDCSTNCNGNGECISGHCHCFPGFLGPDCAKDSCPVLCSGNGEYEKGHCVCRNGWKGPECDVPEEQCIDPTCFGHGTCIMGVCICVPGYKGEICEEEDCLDPMCSGHGVCVQGECHCSAGWGGVNCETSLPVCQEQCSGHGTFLLDAGLCSCEPQWTGSDCSTELCTLDCGSHGVCSRGICQCEEGWVGPTCEERTCHSHCAEHGQCKDGKCECSPGWEGDHCTIAHYLDAVRDGCPGLCYGNGRCTLDQNGWHCVCQVGWSGSGCNVVMEMVCGDNLDNDGDGLTDCVDPDCCQQNNCYASPLCQGSPDPLDLIQHSQPPFSQHPPRLFYDRIRFLIGKESTHVIPGDVSFESRRACVIRGQVLAIDGTPLVGVNVSFLHHNEYGYTISRQDGSFDLVAVGGISVTLVFDRSPFISEKRTLWLPWNRFIIVDKVVMQRTESDIPSCDISSFISPNPIVLPSPLTAFGGSCPERGTVIPELQVVQEEIPIPSSFVKLSYLSSRTPGYKTLLRMILTHATIPSGMTKVHLIVAVEGRLLQKWFPAAANLVYTFAWNKTDIYGQKVSGLAEAMVSVGYEYEKCPDFILWEKRTVTLQGFEMDASNLGGWSINKHHVLNPQSGIVHKGNGENMFISQQPPVISTVMGNGHQRSVSCSNCNGLALNSKLFAPVALASGPDGSLYIGDFNFVRRIFPSGNSIGILELRNRDTRHSTSPAHKYYLAVDPVSESLYLSDTNTRKIYKAKSLVETKDLAKNADVVAGTGDQCLPFDQSHCGDGGKASEASLNSPRGITVDKHGFIYFVDGTMIRKIDENGVITTIIGSNGLTSTQPLSCDSGMDITQVRLEWPTDLTVNPLDNSLYVLDNNIVLQISENRRVRIIAGRPIHCQVPGIDHFIISKVAIHSTLESARAIAVSHSGILYIAETDERKINRIQQVTTNGEISIIAGTPSDCDCKIDPNCDCFSGDGGYAKDAKLKAPSSLAVSPDDTLYVADLGNVRIRSVSRNKAHLSDTNMYEIASPADQELYQFTINGTHLHTLNLITRDYIYNFTYSSEGDIGTITSSNGNSVHIRRDTSGLPLWIVVPGGQVYWLTISSNGVLKRVYAQGYNLALMTYPGNTGLLATKSDENGWTTVYEYDSDGHLTNATFPTGEVSSFHSDVEKLTRVELDTSNRENVITATNFSATSTIYTLKQDNTQNIYRVSLDGSLRVTFASGMEITLNTEPHILAGVISPTLGKCNISLPGEHNSNLIEWRQRREQTKGNISTFERRLRAHNRNLLSIDFDHVTRTGKIYDDHRKFTLRIMYDQTGRPVLWSPISKYNEVNITYSHSGLVTYIQRGTWTEKMEYDPSGNIISRTWADGKIWSYTYLEKSVMLLLHSQRRYIFEYDQSDYLLSVTMPSMVRHALQTMLSVGYYRNIYTPPDSTAAFIQDITRDGRLLQTLYPGTGRRVLYKYTKQSRLSEILYDTTQVTFTYEESSGVIKTIHLMHDGFICTIRYRQTGPLISRQIFRFSEEGLVNARFDYSYNNFRVTSMQAMINETPLPIDLYRYVDVSGRTEQFGKFSVINY…
SIO_010081: TENM1
subclass of: SO_0000673
so part of: TENM1
location: complement(join(1230784..1231542,1232936..1233078,1233587..1234807,1235470..1235857,1239941..1240237,1246287..1246522,1250102..1250274,1259298..1259808,1261600..1261966,1279721..1279875,1291518..1291750,1295906..1295926,1296865..1297114,1301855..1301998,1307571..1307838,1310980..1311241,1312990..1313109,1319937..1320153,1333880..1334026,1335881..1335904,1337028..1337213,1356612..1356812,1360137..1360331,1361463..1361564,1365000..1365210,1366667..1366866,1372656..1372808,1383739..1383977,1397167..1397407,1452237..1452495))
location: region:1230784-1452495:-1
so has part: feature:1452237-1452495:-1:exon
so has part: feature:1397167-1397407:-1:exon
so has part: feature:1383739-1383977:-1:exon
so has part: feature:1372656-1372808:-1:exon
so has part: feature:1366667-1366866:-1:exon
so has part: feature:1365000-1365210:-1:exon
so has part: feature:1361463-1361564:-1:exon
so has part: feature:1360137-1360331:-1:exon
so has part: feature:1356612-1356812:-1:exon
so has part: feature:1337028-1337213:-1:exon
so has part: feature:1335881-1335904:-1:exon
so has part: feature:1333880-1334026:-1:exon
so has part: feature:1319937-1320153:-1:exon
so has part: feature:1312990-1313109:-1:exon
so has part: feature:1310980-1311241:-1:exon
so has part: feature:1307571-1307838:-1:exon
so has part: feature:1301855-1301998:-1:exon
so has part: feature:1296865-1297114:-1:exon
so has part: feature:1295906-1295926:-1:exon
so has part: feature:1291518-1291750:-1:exon
so has part: feature:1279721-1279875:-1:exon
so has part: feature:1261600-1261966:-1:exon
so has part: feature:1259298-1259808:-1:exon
so has part: feature:1250102-1250274:-1:exon
so has part: feature:1246287-1246522:-1:exon
so has part: feature:1239941-1240237:-1:exon
so has part: feature:1235470-1235857:-1:exon
so has part: feature:1233587-1234807:-1:exon
so has part: feature:1232936-1233078:-1:exon
so has part: feature:1230784-1231542:-1:exon

XP_032052236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1452237-1452495:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1397167-1397407:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1383739-1383977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1372656-1372808:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1366667-1366866:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1365000-1365210:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1361463-1361564:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1360137-1360331:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1356612-1356812:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1337028-1337213:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1335881-1335904:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1333880-1334026:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1319937-1320153:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1312990-1313109:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1310980-1311241:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1307571-1307838:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1301855-1301998:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1296865-1297114:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1295906-1295926:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1291518-1291750:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1279721-1279875:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1261600-1261966:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1259298-1259808:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1250102-1250274:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1246287-1246522:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1239941-1240237:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1235470-1235857:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1233587-1234807:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1232936-1233078:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1230784-1231542:-1:exon

SMARCA1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: SMARCA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2493798..2526969)
location: region:2493798-2526969:-1
so has part: feature:2493798-2526969:-1:exon
subclass of: SO_0000010

116494615
type: Gene
SIO_000068: ncbigene

position:2493798:-1
position: 2493798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2526969:-1
position: 2526969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2493798-2526969:-1:exon

SMARCA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SMARCA1
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196568.1
SIO_010081: SMARCA1
subclass of: SO_0000673
so part of: SMARCA1
location: complement(join(2493798..2498226,2498910..2499020,2503884..2504096,2504311..2504429,2505366..2505498,2506980..2507102,2507492..2507605,2507807..2507917,2509132..2509251,2509861..2510009,2510986..2511118,2512292..2512444,2512834..2512955,2513499..2513725,2514447..2514556,2515296..2515364,2516099..2516230,2516462..2516617,2518014..2518193,2519096..2519196,2519321..2519421,2520365..2520531,2523846..2523932,2526828..2526969))
location: region:2493798-2526969:-1
so has part: feature:2526828-2526969:-1:exon
so has part: feature:2523846-2523932:-1:exon
so has part: feature:2520365-2520531:-1:exon
so has part: feature:2519321-2519421:-1:exon
so has part: feature:2519096-2519196:-1:exon
so has part: feature:2518014-2518193:-1:exon
so has part: feature:2516462-2516617:-1:exon
so has part: feature:2516099-2516230:-1:exon
so has part: feature:2515296-2515364:-1:exon
so has part: feature:2514447-2514556:-1:exon
so has part: feature:2513499-2513725:-1:exon
so has part: feature:2512834-2512955:-1:exon
so has part: feature:2512292-2512444:-1:exon
so has part: feature:2510986-2511118:-1:exon
so has part: feature:2509861-2510009:-1:exon
so has part: feature:2509132-2509251:-1:exon
so has part: feature:2507807-2507917:-1:exon
so has part: feature:2507492-2507605:-1:exon
so has part: feature:2506980-2507102:-1:exon
so has part: feature:2505366-2505498:-1:exon
so has part: feature:2504311-2504429:-1:exon
so has part: feature:2503884-2504096:-1:exon
so has part: feature:2498910-2499020:-1:exon
so has part: feature:2493798-2498226:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2526828-2526969:-1:exon

position:2526828:-1
position: 2526828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2523846-2523932:-1:exon

position:2523846:-1
position: 2523846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2523932:-1
position: 2523932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2520365-2520531:-1:exon

position:2520365:-1
position: 2520365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2520531:-1
position: 2520531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2519321-2519421:-1:exon

position:2519321:-1
position: 2519321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2519421:-1
position: 2519421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2519096-2519196:-1:exon

position:2519096:-1
position: 2519096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2519196:-1
position: 2519196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2518014-2518193:-1:exon

position:2518014:-1
position: 2518014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2518193:-1
position: 2518193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2516462-2516617:-1:exon

position:2516462:-1
position: 2516462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2516617:-1
position: 2516617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2516099-2516230:-1:exon

position:2516099:-1
position: 2516099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2516230:-1
position: 2516230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2515296-2515364:-1:exon

position:2515296:-1
position: 2515296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2515364:-1
position: 2515364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2514447-2514556:-1:exon

position:2514447:-1
position: 2514447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2514556:-1
position: 2514556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2513499-2513725:-1:exon

position:2513499:-1
position: 2513499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2513725:-1
position: 2513725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2512834-2512955:-1:exon

position:2512834:-1
position: 2512834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2512955:-1
position: 2512955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2512292-2512444:-1:exon

position:2512292:-1
position: 2512292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2512444:-1
position: 2512444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2510986-2511118:-1:exon

position:2510986:-1
position: 2510986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2511118:-1
position: 2511118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2509861-2510009:-1:exon

position:2509861:-1
position: 2509861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2510009:-1
position: 2510009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2509132-2509251:-1:exon

position:2509132:-1
position: 2509132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2509251:-1
position: 2509251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2507807-2507917:-1:exon

position:2507807:-1
position: 2507807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2507917:-1
position: 2507917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2507492-2507605:-1:exon

position:2507492:-1
position: 2507492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2507605:-1
position: 2507605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2506980-2507102:-1:exon

position:2506980:-1
position: 2506980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2507102:-1
position: 2507102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2505366-2505498:-1:exon

position:2505366:-1
position: 2505366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2505498:-1
position: 2505498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2504311-2504429:-1:exon

position:2504311:-1
position: 2504311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2504429:-1
position: 2504429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2503884-2504096:-1:exon

position:2503884:-1
position: 2503884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2504096:-1
position: 2504096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2498910-2499020:-1:exon

position:2498910:-1
position: 2498910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2499020:-1
position: 2499020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2493798-2498226:-1:exon

position:2498226:-1
position: 2498226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMARCA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SMARCA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable global transcription activator SNF2L1
translation: MDPGPGSPGAPAAARSDGEVPSTSTSGSQEPGSEEKNDPPFQLKPPPKAARPEKEIDPEYEEKMKADRAKRFEFLLKQTELFAHFIQPAAQKSPTSPLKVKLGRPRIKKDEKQCLISAGDYRHRRTEQEEDEELLSESRKTSNVCIRFEESPSYVKGGTLRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRAVCLIGDKDARAAFIRDVMMPGEWDVCVTSYEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDTHLITNSGKMLVLDKLLAKLREQGSRVLLFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFNAPNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKDEMLQMIRHGATHVFASKDSELTEEDITTILERGEKKTAEMNERLQKMGESSLRNFTMDTEMSLYNFEGEDYREKQKLSMMEWIEPPKRERKANYAVDAYFREALRVSEPKVPKAPRPPKQPNIQDFQFFPPRLFELLEKEILYYRKTIGYKVPRNPDLPNAAQVQKEEQKKIDDSMPLTPEETEEKEKLLTQGFTNWNKRDFNQFIKANEKYGRDDIDNIAREVEGKSPEEVIEYSAVFWERCNELQDIERIMAQIERGEARIQRRISIKKALDAKIARYKAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKMGFDKENVYEELRQCVRNAPQFRFDWFIKSRTAMEFQRRCNTLISLIEKENMEIEEKERAEKKKRGSKVTSSQKRKADLATENSGKKDAKKVKS
SIO_010081: SMARCA1
subclass of: SO_0000673
so part of: SMARCA1
location: complement(join(2498155..2498226,2498910..2499020,2503884..2504096,2504311..2504429,2505366..2505498,2506980..2507102,2507492..2507605,2507807..2507917,2509132..2509251,2509861..2510009,2510986..2511118,2512292..2512444,2512834..2512955,2513499..2513725,2514447..2514556,2515296..2515364,2516099..2516230,2516462..2516617,2518014..2518193,2519096..2519196,2519321..2519421,2520365..2520531,2523846..2523932,2526828..2526932))
location: region:2498155-2526932:-1
so has part: feature:2526828-2526932:-1:exon
so has part: feature:2523846-2523932:-1:exon
so has part: feature:2520365-2520531:-1:exon
so has part: feature:2519321-2519421:-1:exon
so has part: feature:2519096-2519196:-1:exon
so has part: feature:2518014-2518193:-1:exon
so has part: feature:2516462-2516617:-1:exon
so has part: feature:2516099-2516230:-1:exon
so has part: feature:2515296-2515364:-1:exon
so has part: feature:2514447-2514556:-1:exon
so has part: feature:2513499-2513725:-1:exon
so has part: feature:2512834-2512955:-1:exon
so has part: feature:2512292-2512444:-1:exon
so has part: feature:2510986-2511118:-1:exon
so has part: feature:2509861-2510009:-1:exon
so has part: feature:2509132-2509251:-1:exon
so has part: feature:2507807-2507917:-1:exon
so has part: feature:2507492-2507605:-1:exon
so has part: feature:2506980-2507102:-1:exon
so has part: feature:2505366-2505498:-1:exon
so has part: feature:2504311-2504429:-1:exon
so has part: feature:2503884-2504096:-1:exon
so has part: feature:2498910-2499020:-1:exon
so has part: feature:2498155-2498226:-1:exon

XP_032052459.1
type: Protein
SIO_000068: ncbiprotein

position:2498155:-1
position: 2498155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2526932:-1
position: 2526932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2526828-2526932:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2523846-2523932:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2520365-2520531:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2519321-2519421:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2519096-2519196:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2518014-2518193:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2516462-2516617:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2516099-2516230:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2515296-2515364:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2514447-2514556:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2513499-2513725:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2512834-2512955:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2512292-2512444:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2510986-2511118:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2509861-2510009:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2509132-2509251:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2507807-2507917:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2507492-2507605:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2506980-2507102:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2505366-2505498:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2504311-2504429:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2503884-2504096:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2498910-2499020:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2498155-2498226:-1:exon

GAB3
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: GAB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2536803..2593373
location: region:2536803-2593373:1
so has part: feature:2536803-2593373:1:exon
subclass of: SO_0000010

116494369
type: Gene
SIO_000068: ncbigene

position:2536803:1
position: 2536803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2593373:1
position: 2593373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2536803-2593373:1:exon

GAB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: GAB3
product: GRB2 associated binding protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196232.1
SIO_010081: GAB3
subclass of: SO_0000673
so part of: GAB3
location: join(2536803..2536998,2573541..2573844,2578729..2578945,2579786..2580258,2582692..2582747,2583724..2583979,2584990..2585071,2586526..2586628,2587808..2587921,2588858..2593373)
location: region:2536803-2593373:1
so has part: feature:2536803-2536998:1:exon
so has part: feature:2573541-2573844:1:exon
so has part: feature:2578729-2578945:1:exon
so has part: feature:2579786-2580258:1:exon
so has part: feature:2582692-2582747:1:exon
so has part: feature:2583724-2583979:1:exon
so has part: feature:2584990-2585071:1:exon
so has part: feature:2586526-2586628:1:exon
so has part: feature:2587808-2587921:1:exon
so has part: feature:2588858-2593373:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2536803-2536998:1:exon

position:2536998:1
position: 2536998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2573541-2573844:1:exon

position:2573541:1
position: 2573541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2573844:1
position: 2573844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2578729-2578945:1:exon

position:2578729:1
position: 2578729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2578945:1
position: 2578945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2579786-2580258:1:exon

position:2579786:1
position: 2579786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2580258:1
position: 2580258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2582692-2582747:1:exon

position:2582692:1
position: 2582692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2582747:1
position: 2582747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2583724-2583979:1:exon

position:2583724:1
position: 2583724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2583979:1
position: 2583979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2584990-2585071:1:exon

position:2584990:1
position: 2584990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2585071:1
position: 2585071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2586526-2586628:1:exon

position:2586526:1
position: 2586526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2586628:1
position: 2586628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2587808-2587921:1:exon

position:2587808:1
position: 2587808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2587921:1
position: 2587921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2588858-2593373:1:exon

position:2588858:1
position: 2588858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GAB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: GAB3
product: GRB2 associated binding protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196233.1
SIO_010081: GAB3
subclass of: SO_0000673
so part of: GAB3
location: join(2536803..2536998,2573541..2573844,2578729..2578945,2579786..2580258,2582695..2582747,2583724..2583979,2584990..2585071,2586526..2586628,2587808..2587921,2588858..2593373)
location: region:2536803-2593373:1
so has part: feature:2536803-2536998:1:exon
so has part: feature:2573541-2573844:1:exon
so has part: feature:2578729-2578945:1:exon
so has part: feature:2579786-2580258:1:exon
so has part: feature:2582695-2582747:1:exon
so has part: feature:2583724-2583979:1:exon
so has part: feature:2584990-2585071:1:exon
so has part: feature:2586526-2586628:1:exon
so has part: feature:2587808-2587921:1:exon
so has part: feature:2588858-2593373:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2536803-2536998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2573541-2573844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2578729-2578945:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2579786-2580258:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2582695-2582747:1:exon

position:2582695:1
position: 2582695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2583724-2583979:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2584990-2585071:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2586526-2586628:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2587808-2587921:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2588858-2593373:1:exon

GAB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: GAB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GRB2-associated-binding protein 3 isoform X1
translation: MSAGDVVCTGWLIKSPPERKLKRYAWRKRWFVLRRGRMSGNPDVLEYYRNNHSKKPIRIIDLNECEVLKHSGPNFIRKEFQNNFVFIVRTTYRTFYLVAKTEEEMQIWVHNISQICNFGHLEDGTGSVESLSHTTSSPQPSPAASTHASRIADPSFSVEQAAADASATEETPSESESVFLPDYLFLSNCESGKLSHTRCDSWSNSDRSLEQTSSDDVFVDSLQSQPSLYLVQPCGAVHQDTAPLANPGAVPRSADVSGTPSDFSSSSPLLGTPLTPTFQTEQSQSALPYGVSQLDVLSNTPPPRPPKPTHFLDRRGDEAGGRVLQNGHAGTCRAPVALVPRRISLSSLDNVRNWKADVEGSSLRSRDKRLSLNLPCRFSPLYSTAADGAEDSYVPMRPSTSPSAPGSDCSPDGYIPMSPSSATFTFPVVSTEKLTSPLPELPSDLEPPPVNRDLKPRRKSRPPPLDLRNLSTIREHAAVTRMWTVPYNRMSFISPERDGINSARIFANSVSGEEEESYIHMEHRQATSPYSGAFPWTRKSNLDYLALDFNSASPSPVQKKPFLSEEQRVDYVQVDEQKTQALQNTKQEWTDERQSKV
SIO_010081: GAB3
subclass of: SO_0000673
so part of: GAB3
location: join(2536927..2536998,2573541..2573844,2578729..2578945,2579786..2580258,2582692..2582747,2583724..2583979,2584990..2585071,2586526..2586628,2587808..2587921,2588858..2588974)
location: region:2536927-2588974:1
so has part: feature:2536927-2536998:1:exon
so has part: feature:2573541-2573844:1:exon
so has part: feature:2578729-2578945:1:exon
so has part: feature:2579786-2580258:1:exon
so has part: feature:2582692-2582747:1:exon
so has part: feature:2583724-2583979:1:exon
so has part: feature:2584990-2585071:1:exon
so has part: feature:2586526-2586628:1:exon
so has part: feature:2587808-2587921:1:exon
so has part: feature:2588858-2588974:1:exon

XP_032052123.1
type: Protein
SIO_000068: ncbiprotein

position:2536927:1
position: 2536927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2588974:1
position: 2588974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2536927-2536998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2573541-2573844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2578729-2578945:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2579786-2580258:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2582692-2582747:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2583724-2583979:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2584990-2585071:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2586526-2586628:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2587808-2587921:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2588858-2588974:1:exon

GAB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: GAB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GRB2-associated-binding protein 3 isoform X2
translation: MSAGDVVCTGWLIKSPPERKLKRYAWRKRWFVLRRGRMSGNPDVLEYYRNNHSKKPIRIIDLNECEVLKHSGPNFIRKEFQNNFVFIVRTTYRTFYLVAKTEEEMQIWVHNISQICNFGHLEDGTGSVESLSHTTSSPQPSPAASTHASRIADPSFSVEQAAADASATEETPSESESVFLPDYLFLSNCESGKLSHTRCDSWSNSDRSLEQTSSDDVFVDSLQSQPSLYLVQPCGAVHQDTAPLANPGAVPRSADVSGTPSDFSSSSPLLGTPLTPTFQTEQSQSALPYGVSQLDVLSNTPPPRPPKPTHFLDRRGDEAGGRVLQNGHAGTCRAPVALVPRRISLSSLDNVRNWKDVEGSSLRSRDKRLSLNLPCRFSPLYSTAADGAEDSYVPMRPSTSPSAPGSDCSPDGYIPMSPSSATFTFPVVSTEKLTSPLPELPSDLEPPPVNRDLKPRRKSRPPPLDLRNLSTIREHAAVTRMWTVPYNRMSFISPERDGINSARIFANSVSGEEEESYIHMEHRQATSPYSGAFPWTRKSNLDYLALDFNSASPSPVQKKPFLSEEQRVDYVQVDEQKTQALQNTKQEWTDERQSKV
SIO_010081: GAB3
subclass of: SO_0000673
so part of: GAB3
location: join(2536927..2536998,2573541..2573844,2578729..2578945,2579786..2580258,2582695..2582747,2583724..2583979,2584990..2585071,2586526..2586628,2587808..2587921,2588858..2588974)
location: region:2536927-2588974:1
so has part: feature:2536927-2536998:1:exon
so has part: feature:2573541-2573844:1:exon
so has part: feature:2578729-2578945:1:exon
so has part: feature:2579786-2580258:1:exon
so has part: feature:2582695-2582747:1:exon
so has part: feature:2583724-2583979:1:exon
so has part: feature:2584990-2585071:1:exon
so has part: feature:2586526-2586628:1:exon
so has part: feature:2587808-2587921:1:exon
so has part: feature:2588858-2588974:1:exon

XP_032052124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2536927-2536998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2573541-2573844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2578729-2578945:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2579786-2580258:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2582695-2582747:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2583724-2583979:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2584990-2585071:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2586526-2586628:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2587808-2587921:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2588858-2588974:1:exon

LOC116494255
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116494255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2605575..2643032
location: region:2605575-2643032:1
so has part: feature:2605575-2643032:1:exon
subclass of: SO_0000010

116494255
type: Gene
SIO_000068: ncbigene

position:2605575:1
position: 2605575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2643032:1
position: 2643032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2605575-2643032:1:exon

LOC116494255
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116494255
product: prefoldin subunit 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196015.1
SIO_010081: LOC116494255
subclass of: SO_0000673
so part of: LOC116494255
location: join(2605575..2605840,2612543..2612685,2613757..2613832,2614637..2614739,2614900..2614993,2615094..2615205,2616304..2616410,2616949..2616996,2621314..2621399,2622299..2622422,2624195..2624331,2624595..2624698,2625552..2625698,2626152..2626211,2626304..2626414,2627271..2627387,2627519..2627549,2628049..2628169,2630118..2630141,2630255..2630311,2630646..2630753,2631301..2631760)
location: region:2605575-2631760:1
so has part: feature:2605575-2605840:1:exon
so has part: feature:2612543-2612685:1:exon
so has part: feature:2613757-2613832:1:exon
so has part: feature:2614637-2614739:1:exon
so has part: feature:2614900-2614993:1:exon
so has part: feature:2615094-2615205:1:exon
so has part: feature:2616304-2616410:1:exon
so has part: feature:2616949-2616996:1:exon
so has part: feature:2621314-2621399:1:exon
so has part: feature:2622299-2622422:1:exon
so has part: feature:2624195-2624331:1:exon
so has part: feature:2624595-2624698:1:exon
so has part: feature:2625552-2625698:1:exon
so has part: feature:2626152-2626211:1:exon
so has part: feature:2626304-2626414:1:exon
so has part: feature:2627271-2627387:1:exon
so has part: feature:2627519-2627549:1:exon
so has part: feature:2628049-2628169:1:exon
so has part: feature:2630118-2630141:1:exon
so has part: feature:2630255-2630311:1:exon
so has part: feature:2630646-2630753:1:exon
so has part: feature:2631301-2631760:1:exon

position:2631760:1
position: 2631760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2605575-2605840:1:exon

position:2605840:1
position: 2605840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2612543-2612685:1:exon

position:2612543:1
position: 2612543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2612685:1
position: 2612685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2613757-2613832:1:exon

position:2613757:1
position: 2613757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2613832:1
position: 2613832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2614637-2614739:1:exon

position:2614637:1
position: 2614637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2614739:1
position: 2614739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2614900-2614993:1:exon

position:2614900:1
position: 2614900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2614993:1
position: 2614993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2615094-2615205:1:exon

position:2615094:1
position: 2615094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2615205:1
position: 2615205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2616304-2616410:1:exon

position:2616304:1
position: 2616304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2616410:1
position: 2616410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2616949-2616996:1:exon

position:2616949:1
position: 2616949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2616996:1
position: 2616996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2621314-2621399:1:exon

position:2621314:1
position: 2621314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2621399:1
position: 2621399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2622299-2622422:1:exon

position:2622299:1
position: 2622299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2622422:1
position: 2622422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2624195-2624331:1:exon

position:2624195:1
position: 2624195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2624331:1
position: 2624331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2624595-2624698:1:exon

position:2624595:1
position: 2624595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2624698:1
position: 2624698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2625552-2625698:1:exon

position:2625552:1
position: 2625552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2625698:1
position: 2625698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2626152-2626211:1:exon

position:2626152:1
position: 2626152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2626211:1
position: 2626211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2626304-2626414:1:exon

position:2626304:1
position: 2626304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2626414:1
position: 2626414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2627271-2627387:1:exon

position:2627271:1
position: 2627271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2627387:1
position: 2627387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2627519-2627549:1:exon

position:2627519:1
position: 2627519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2627549:1
position: 2627549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2628049-2628169:1:exon

position:2628049:1
position: 2628049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2628169:1
position: 2628169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2630118-2630141:1:exon

position:2630118:1
position: 2630118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2630141:1
position: 2630141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2630255-2630311:1:exon

position:2630255:1
position: 2630255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2630311:1
position: 2630311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2630646-2630753:1:exon

position:2630646:1
position: 2630646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2630753:1
position: 2630753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2631301-2631760:1:exon

position:2631301:1
position: 2631301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116494255
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116494255
product: prefoldin subunit 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196016.1
SIO_010081: LOC116494255
subclass of: SO_0000673
so part of: LOC116494255
location: join(2605575..2605840,2612543..2612685,2613757..2613832,2614637..2614739,2614900..2614993,2615094..2615205,2616304..2616410,2616949..2616990,2621314..2621399,2622299..2622422,2624195..2624331,2624595..2624698,2625552..2625698,2626152..2626211,2626304..2626414,2627271..2627387,2627519..2627549,2628049..2628169,2630118..2630141,2630255..2630311,2630646..2630753,2631301..2631760)
location: region:2605575-2631760:1
so has part: feature:2605575-2605840:1:exon
so has part: feature:2612543-2612685:1:exon
so has part: feature:2613757-2613832:1:exon
so has part: feature:2614637-2614739:1:exon
so has part: feature:2614900-2614993:1:exon
so has part: feature:2615094-2615205:1:exon
so has part: feature:2616304-2616410:1:exon
so has part: feature:2616949-2616990:1:exon
so has part: feature:2621314-2621399:1:exon
so has part: feature:2622299-2622422:1:exon
so has part: feature:2624195-2624331:1:exon
so has part: feature:2624595-2624698:1:exon
so has part: feature:2625552-2625698:1:exon
so has part: feature:2626152-2626211:1:exon
so has part: feature:2626304-2626414:1:exon
so has part: feature:2627271-2627387:1:exon
so has part: feature:2627519-2627549:1:exon
so has part: feature:2628049-2628169:1:exon
so has part: feature:2630118-2630141:1:exon
so has part: feature:2630255-2630311:1:exon
so has part: feature:2630646-2630753:1:exon
so has part: feature:2631301-2631760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2605575-2605840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2612543-2612685:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2613757-2613832:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2614637-2614739:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2614900-2614993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2615094-2615205:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2616304-2616410:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2616949-2616990:1:exon

position:2616990:1
position: 2616990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2621314-2621399:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2622299-2622422:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2624195-2624331:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2624595-2624698:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2625552-2625698:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2626152-2626211:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2626304-2626414:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2627271-2627387:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2627519-2627549:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2628049-2628169:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2630118-2630141:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2630255-2630311:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2630646-2630753:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2631301-2631760:1:exon

LOC116494255
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116494255
product: prefoldin subunit 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032196019.1
SIO_010081: LOC116494255
subclass of: SO_0000673
so part of: LOC116494255
location: join(2605654..2605840,2612543..2612685,2613757..2613832,2614637..2614739,2614900..2614993,2615094..2615205,2616304..2616410,2616949..2616996,2621314..2621399,2622299..2622422,2624195..2624331,2624595..2624698,2625552..2625698,2626152..2626211,2626304..2626414,2627271..2627387,2627519..2627549,2628049..2628169,2630118..2630141,2630255..2630311,2630646..2630753,2637662..2637786,2638812..2638878,2639330..2639428,2641163..2641301,2641822..2643032)
location: region:2605654-2643032:1
so has part: feature:2605654-2605840:1:exon
so has part: feature:2612543-2612685:1:exon
so has part: feature:2613757-2613832:1:exon
so has part: feature:2614637-2614739:1:exon
so has part: feature:2614900-2614993:1:exon
so has part: feature:2615094-2615205:1:exon
so has part: feature:2616304-2616410:1:exon
so has part: feature:2616949-2616996:1:exon
so has part: feature:2621314-2621399:1:exon
so has part: feature:2622299-2622422:1:exon
so has part: feature:2624195-2624331:1:exon
so has part: feature:2624595-2624698:1:exon
so has part: feature:2625552-2625698:1:exon
so has part: feature:2626152-2626211:1:exon
so has part: feature:2626304-2626414:1:exon
so has part: feature:2627271-2627387:1:exon
so has part: feature:2627519-2627549:1:exon
so has part: feature:2628049-2628169:1:exon
so has part: feature:2630118-2630141:1:exon
so has part: feature:2630255-2630311:1:exon
so has part: feature:2630646-2630753:1:exon
so has part: feature:2637662-2637786:1:exon
so has part: feature:2638812-2638878:1:exon
so has part: feature:2639330-2639428:1:exon
so has part: feature:2641163-2641301:1:exon
so has part: feature:2641822-2643032:1:exon

position:2605654:1
position: 2605654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2605654-2605840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2612543-2612685:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2613757-2613832:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2614637-2614739:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2614900-2614993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2615094-2615205:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2616304-2616410:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2616949-2616996:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2621314-2621399:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2622299-2622422:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2624195-2624331:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2624595-2624698:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2625552-2625698:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2626152-2626211:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2626304-2626414:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2627271-2627387:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2627519-2627549:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2628049-2628169:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2630118-2630141:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2630255-2630311:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2630646-2630753:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2637662-2637786:1:exon

position:2637662:1
position: 2637662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2637786:1
position: 2637786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2638812-2638878:1:exon

position:2638812:1
position: 2638812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2638878:1
position: 2638878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2639330-2639428:1:exon

position:2639330:1
position: 2639330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2639428:1
position: 2639428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2641163-2641301:1:exon

position:2641163:1
position: 2641163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2641301:1
position: 2641301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2641822-2643032:1:exon

position:2641822:1
position: 2641822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116494255
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116494255
product: prefoldin subunit 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196013.1
SIO_010081: LOC116494255
subclass of: SO_0000673
so part of: LOC116494255
location: join(2605654..2605840,2612543..2612685,2613757..2613832,2614637..2614739,2614900..2614993,2615094..2615205,2616304..2616410,2616949..2616996,2621314..2621399,2622299..2622422,2624195..2624331,2624595..2624698,2625552..2625698,2626152..2626211,2626304..2626414,2627271..2627387,2627519..2627549,2628049..2628169,2630118..2630141,2630255..2630311,2630646..2630753,2631301..2631355,2635376..2635653)
location: region:2605654-2635653:1
so has part: feature:2605654-2605840:1:exon
so has part: feature:2612543-2612685:1:exon
so has part: feature:2613757-2613832:1:exon
so has part: feature:2614637-2614739:1:exon
so has part: feature:2614900-2614993:1:exon
so has part: feature:2615094-2615205:1:exon
so has part: feature:2616304-2616410:1:exon
so has part: feature:2616949-2616996:1:exon
so has part: feature:2621314-2621399:1:exon
so has part: feature:2622299-2622422:1:exon
so has part: feature:2624195-2624331:1:exon
so has part: feature:2624595-2624698:1:exon
so has part: feature:2625552-2625698:1:exon
so has part: feature:2626152-2626211:1:exon
so has part: feature:2626304-2626414:1:exon
so has part: feature:2627271-2627387:1:exon
so has part: feature:2627519-2627549:1:exon
so has part: feature:2628049-2628169:1:exon
so has part: feature:2630118-2630141:1:exon
so has part: feature:2630255-2630311:1:exon
so has part: feature:2630646-2630753:1:exon
so has part: feature:2631301-2631355:1:exon
so has part: feature:2635376-2635653:1:exon

position:2635653:1
position: 2635653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2605654-2605840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2612543-2612685:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2613757-2613832:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2614637-2614739:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2614900-2614993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2615094-2615205:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2616304-2616410:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2616949-2616996:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2621314-2621399:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2622299-2622422:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2624195-2624331:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2624595-2624698:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2625552-2625698:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2626152-2626211:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2626304-2626414:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2627271-2627387:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2627519-2627549:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2628049-2628169:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2630118-2630141:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2630255-2630311:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2630646-2630753:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2631301-2631355:1:exon

position:2631355:1
position: 2631355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2635376-2635653:1:exon

position:2635376:1
position: 2635376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116494255
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116494255
product: prefoldin subunit 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196014.1
SIO_010081: LOC116494255
subclass of: SO_0000673
so part of: LOC116494255
location: join(2605654..2605840,2612543..2612685,2613757..2613832,2614637..2614739,2614900..2614993,2615094..2615205,2616304..2616410,2616949..2616996,2621314..2621399,2622299..2622422,2624195..2624331,2624595..2624698,2625552..2625698,2626152..2626211,2626304..2626414,2627271..2627387,2627519..2627549,2628049..2628169,2630255..2630311,2630646..2630753,2631301..2631760)
location: region:2605654-2631760:1
so has part: feature:2605654-2605840:1:exon
so has part: feature:2612543-2612685:1:exon
so has part: feature:2613757-2613832:1:exon
so has part: feature:2614637-2614739:1:exon
so has part: feature:2614900-2614993:1:exon
so has part: feature:2615094-2615205:1:exon
so has part: feature:2616304-2616410:1:exon
so has part: feature:2616949-2616996:1:exon
so has part: feature:2621314-2621399:1:exon
so has part: feature:2622299-2622422:1:exon
so has part: feature:2624195-2624331:1:exon
so has part: feature:2624595-2624698:1:exon
so has part: feature:2625552-2625698:1:exon
so has part: feature:2626152-2626211:1:exon
so has part: feature:2626304-2626414:1:exon
so has part: feature:2627271-2627387:1:exon
so has part: feature:2627519-2627549:1:exon
so has part: feature:2628049-2628169:1:exon
so has part: feature:2630255-2630311:1:exon
so has part: feature:2630646-2630753:1:exon
so has part: feature:2631301-2631760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2605654-2605840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2612543-2612685:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2613757-2613832:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2614637-2614739:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2614900-2614993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2615094-2615205:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2616304-2616410:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2616949-2616996:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2621314-2621399:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2622299-2622422:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2624195-2624331:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2624595-2624698:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2625552-2625698:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2626152-2626211:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2626304-2626414:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2627271-2627387:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2627519-2627549:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2628049-2628169:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2630255-2630311:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2630646-2630753:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2631301-2631760:1:exon

LOC116494255
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116494255
product: prefoldin subunit 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196018.1
SIO_010081: LOC116494255
subclass of: SO_0000673
so part of: LOC116494255
location: join(2605654..2605840,2612543..2612685,2613757..2613832,2614637..2614739,2614900..2614993,2615094..2615205,2616304..2616410,2616949..2616990,2621314..2621399,2622299..2622422,2624195..2624331,2624595..2624698,2626304..2626414,2627271..2627387,2627519..2627549,2628049..2628169,2630255..2630311,2630646..2630753,2631301..2631760)
location: region:2605654-2631760:1
so has part: feature:2605654-2605840:1:exon
so has part: feature:2612543-2612685:1:exon
so has part: feature:2613757-2613832:1:exon
so has part: feature:2614637-2614739:1:exon
so has part: feature:2614900-2614993:1:exon
so has part: feature:2615094-2615205:1:exon
so has part: feature:2616304-2616410:1:exon
so has part: feature:2616949-2616990:1:exon
so has part: feature:2621314-2621399:1:exon
so has part: feature:2622299-2622422:1:exon
so has part: feature:2624195-2624331:1:exon
so has part: feature:2624595-2624698:1:exon
so has part: feature:2626304-2626414:1:exon
so has part: feature:2627271-2627387:1:exon
so has part: feature:2627519-2627549:1:exon
so has part: feature:2628049-2628169:1:exon
so has part: feature:2630255-2630311:1:exon
so has part: feature:2630646-2630753:1:exon
so has part: feature:2631301-2631760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2605654-2605840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2612543-2612685:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2613757-2613832:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2614637-2614739:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2614900-2614993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2615094-2615205:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2616304-2616410:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2616949-2616990:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2621314-2621399:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2622299-2622422:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2624195-2624331:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2624595-2624698:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2626304-2626414:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2627271-2627387:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2627519-2627549:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2628049-2628169:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2630255-2630311:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2630646-2630753:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2631301-2631760:1:exon

LOC116494255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116494255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol-binding clathrin assembly protein isoform X6
translation: MSGQSLTDRIAAAQHSVTGSAVAKAVCKATTHEVMGPKKKHLDYLIQCTNEMNVNIPQLADTLFERTANSSWVVVFKALITTHHLMMYGNERFIQYLASRNTLFNLNNYLDKSAMQGYDMSTFIRRYSRYLNEKALSYRLVAVDFTKMKRGIDGVMRTMNAEKLLKTLPIIQNQLDALLDFDANPNELTNGVINAAFMLLFKDSIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLARMTKLSEFLKVAEQVGIDQGDIPDLTQVSAPSSLLEALEQHLASLEGKKTKEVSAASRASALSSAVSTLSNTGMSFSRMDEKEKQQALEEEQARLQALKEQRLREISVVSNSTSTSASPSTLSGKSVNTTVAVDLFAVPAPTTNSMPNLSSDLFDLQPAFVPTVQSTPAISTSASSAWGGPFSSSNGCVGSPPHLDIFDMKPVEEAVKSTAPFINSTFSSKHTVELFSDDFSGHKSAYASVYHPLPVDGFPLHSAPPSTTPSTINVDFDAVFGGKSTAPEYRTTSDDVLQPTVPLQSQRAPSTNQQSGKILANDLDSSLANLVGNLGFGGTPSKKSDMQWTQPTEKKLTGGTNWQAKTSTSTTWNPTPLPTMPHMNGVHYPGYVPAPITYPVTTPQVPVYGMVPPQIGAAPLMAPQSMIYTQPGLRPTNPFAPVSGTQEDVDSFMKQPGNETADIVLKKLDEQYQKYKFLELNLAQKKRRLKSQIPEIKQTLEILKHMQKKKESTNPMETRFLLADNLYCKASVPPTDKVCLWLGANVMLEYDIDEAQALLEKNLSTATRNLDSLEEDLDFLRDQFTTTEVNMARVYNWDVKRRNKEDPSKNKA
SIO_010081: LOC116494255
subclass of: SO_0000673
so part of: LOC116494255
location: join(2605711..2605840,2612543..2612685,2613757..2613832,2614637..2614739,2614900..2614993,2615094..2615205,2616304..2616410,2616949..2616996,2621314..2621399,2622299..2622422,2624195..2624331,2624595..2624698,2625552..2625698,2626152..2626211,2626304..2626414,2627271..2627387,2627519..2627549,2628049..2628169,2630118..2630141,2630255..2630311,2630646..2630753,2637662..2637786,2638812..2638878,2639330..2639428,2641163..2641301,2641822..2641892)
location: region:2605711-2641892:1
so has part: feature:2605711-2605840:1:exon
so has part: feature:2612543-2612685:1:exon
so has part: feature:2613757-2613832:1:exon
so has part: feature:2614637-2614739:1:exon
so has part: feature:2614900-2614993:1:exon
so has part: feature:2615094-2615205:1:exon
so has part: feature:2616304-2616410:1:exon
so has part: feature:2616949-2616996:1:exon
so has part: feature:2621314-2621399:1:exon
so has part: feature:2622299-2622422:1:exon
so has part: feature:2624195-2624331:1:exon
so has part: feature:2624595-2624698:1:exon
so has part: feature:2625552-2625698:1:exon
so has part: feature:2626152-2626211:1:exon
so has part: feature:2626304-2626414:1:exon
so has part: feature:2627271-2627387:1:exon
so has part: feature:2627519-2627549:1:exon
so has part: feature:2628049-2628169:1:exon
so has part: feature:2630118-2630141:1:exon
so has part: feature:2630255-2630311:1:exon
so has part: feature:2630646-2630753:1:exon
so has part: feature:2637662-2637786:1:exon
so has part: feature:2638812-2638878:1:exon
so has part: feature:2639330-2639428:1:exon
so has part: feature:2641163-2641301:1:exon
so has part: feature:2641822-2641892:1:exon

XP_032051910.1
type: Protein
SIO_000068: ncbiprotein

position:2605711:1
position: 2605711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2641892:1
position: 2641892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2605711-2605840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2612543-2612685:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2613757-2613832:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2614637-2614739:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2614900-2614993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2615094-2615205:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2616304-2616410:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2616949-2616996:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2621314-2621399:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2622299-2622422:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2624195-2624331:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2624595-2624698:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2625552-2625698:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2626152-2626211:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2626304-2626414:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2627271-2627387:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2627519-2627549:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2628049-2628169:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2630118-2630141:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2630255-2630311:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2630646-2630753:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2637662-2637786:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2638812-2638878:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2639330-2639428:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2641163-2641301:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2641822-2641892:1:exon

LOC116494255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116494255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol-binding clathrin assembly protein isoform X1
translation: MSGQSLTDRIAAAQHSVTGSAVAKAVCKATTHEVMGPKKKHLDYLIQCTNEMNVNIPQLADTLFERTANSSWVVVFKALITTHHLMMYGNERFIQYLASRNTLFNLNNYLDKSAMQGYDMSTFIRRYSRYLNEKALSYRLVAVDFTKMKRGIDGVMRTMNAEKLLKTLPIIQNQLDALLDFDANPNELTNGVINAAFMLLFKDSIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLARMTKLSEFLKVAEQVGIDQGDIPDLTQVSAPSSLLEALEQHLASLEGKKTKEVSAASRASALSSAVSTLSNTGMSFSRMDEKEKQQALEEEQARLQALKEQRLREISVVSNSTSTSASPSTLSGKSVNTTVAVDLFAVPAPTTNSMPNLSSDLFDLQPAFVPTVQSTPAISTSASSAWGGPFSSSNGCVGSPPHLDIFDMKPVEEAVKSTAPFINSTFSSKHTVELFSDDFSGHKSAYASVYHPLPVDGFPLHSAPPSTTPSTINVDFDAVFGGKSTAPEYRTTSDDVLQPTVPLQSQRAPSTNQQSGKILANDLDSSLANLVGNLGFGGTPSKKSDMQWTQPTEKKLTGGTNWQAKTSTSTTWNPTPLPTMPHMNGVHYPGYVPAPITYPVTTPQVPVYGMVPPQIGAAPLMAPQSMIYTQPGLRPTNPFAPVSGTQIQFM
SIO_010081: LOC116494255
subclass of: SO_0000673
so part of: LOC116494255
location: join(2605711..2605840,2612543..2612685,2613757..2613832,2614637..2614739,2614900..2614993,2615094..2615205,2616304..2616410,2616949..2616996,2621314..2621399,2622299..2622422,2624195..2624331,2624595..2624698,2625552..2625698,2626152..2626211,2626304..2626414,2627271..2627387,2627519..2627549,2628049..2628169,2630118..2630141,2630255..2630311,2630646..2630753,2631301..2631315)
location: region:2605711-2631315:1
so has part: feature:2605711-2605840:1:exon
so has part: feature:2612543-2612685:1:exon
so has part: feature:2613757-2613832:1:exon
so has part: feature:2614637-2614739:1:exon
so has part: feature:2614900-2614993:1:exon
so has part: feature:2615094-2615205:1:exon
so has part: feature:2616304-2616410:1:exon
so has part: feature:2616949-2616996:1:exon
so has part: feature:2621314-2621399:1:exon
so has part: feature:2622299-2622422:1:exon
so has part: feature:2624195-2624331:1:exon
so has part: feature:2624595-2624698:1:exon
so has part: feature:2625552-2625698:1:exon
so has part: feature:2626152-2626211:1:exon
so has part: feature:2626304-2626414:1:exon
so has part: feature:2627271-2627387:1:exon
so has part: feature:2627519-2627549:1:exon
so has part: feature:2628049-2628169:1:exon
so has part: feature:2630118-2630141:1:exon
so has part: feature:2630255-2630311:1:exon
so has part: feature:2630646-2630753:1:exon
so has part: feature:2631301-2631315:1:exon

XP_032051904.1
type: Protein
SIO_000068: ncbiprotein

position:2631315:1
position: 2631315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2605711-2605840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2612543-2612685:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2613757-2613832:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2614637-2614739:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2614900-2614993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2615094-2615205:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2616304-2616410:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2616949-2616996:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2621314-2621399:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2622299-2622422:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2624195-2624331:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2624595-2624698:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2625552-2625698:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2626152-2626211:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2626304-2626414:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2627271-2627387:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2627519-2627549:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2628049-2628169:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2630118-2630141:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2630255-2630311:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2630646-2630753:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2631301-2631315:1:exon

LOC116494255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116494255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol-binding clathrin assembly protein isoform X1
translation: MSGQSLTDRIAAAQHSVTGSAVAKAVCKATTHEVMGPKKKHLDYLIQCTNEMNVNIPQLADTLFERTANSSWVVVFKALITTHHLMMYGNERFIQYLASRNTLFNLNNYLDKSAMQGYDMSTFIRRYSRYLNEKALSYRLVAVDFTKMKRGIDGVMRTMNAEKLLKTLPIIQNQLDALLDFDANPNELTNGVINAAFMLLFKDSIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLARMTKLSEFLKVAEQVGIDQGDIPDLTQVSAPSSLLEALEQHLASLEGKKTKEVSAASRASALSSAVSTLSNTGMSFSRMDEKEKQQALEEEQARLQALKEQRLREISVVSNSTSTSASPSTLSGKSVNTTVAVDLFAVPAPTTNSMPNLSSDLFDLQPAFVPTVQSTPAISTSASSAWGGPFSSSNGCVGSPPHLDIFDMKPVEEAVKSTAPFINSTFSSKHTVELFSDDFSGHKSAYASVYHPLPVDGFPLHSAPPSTTPSTINVDFDAVFGGKSTAPEYRTTSDDVLQPTVPLQSQRAPSTNQQSGKILANDLDSSLANLVGNLGFGGTPSKKSDMQWTQPTEKKLTGGTNWQAKTSTSTTWNPTPLPTMPHMNGVHYPGYVPAPITYPVTTPQVPVYGMVPPQIGAAPLMAPQSMIYTQPGLRPTNPFAPVSGTQIQFM
SIO_010081: LOC116494255
subclass of: SO_0000673
so part of: LOC116494255
location: join(2605711..2605840,2612543..2612685,2613757..2613832,2614637..2614739,2614900..2614993,2615094..2615205,2616304..2616410,2616949..2616996,2621314..2621399,2622299..2622422,2624195..2624331,2624595..2624698,2625552..2625698,2626152..2626211,2626304..2626414,2627271..2627387,2627519..2627549,2628049..2628169,2630118..2630141,2630255..2630311,2630646..2630753,2631301..2631315)
location: region:2605711-2631315:1
so has part: feature:2605711-2605840:1:exon
so has part: feature:2612543-2612685:1:exon
so has part: feature:2613757-2613832:1:exon
so has part: feature:2614637-2614739:1:exon
so has part: feature:2614900-2614993:1:exon
so has part: feature:2615094-2615205:1:exon
so has part: feature:2616304-2616410:1:exon
so has part: feature:2616949-2616996:1:exon
so has part: feature:2621314-2621399:1:exon
so has part: feature:2622299-2622422:1:exon
so has part: feature:2624195-2624331:1:exon
so has part: feature:2624595-2624698:1:exon
so has part: feature:2625552-2625698:1:exon
so has part: feature:2626152-2626211:1:exon
so has part: feature:2626304-2626414:1:exon
so has part: feature:2627271-2627387:1:exon
so has part: feature:2627519-2627549:1:exon
so has part: feature:2628049-2628169:1:exon
so has part: feature:2630118-2630141:1:exon
so has part: feature:2630255-2630311:1:exon
so has part: feature:2630646-2630753:1:exon
so has part: feature:2631301-2631315:1:exon

XP_032051906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2605711-2605840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2612543-2612685:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2613757-2613832:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2614637-2614739:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2614900-2614993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2615094-2615205:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2616304-2616410:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2616949-2616996:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2621314-2621399:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2622299-2622422:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2624195-2624331:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2624595-2624698:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2625552-2625698:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2626152-2626211:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2626304-2626414:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2627271-2627387:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2627519-2627549:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2628049-2628169:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2630118-2630141:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2630255-2630311:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2630646-2630753:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2631301-2631315:1:exon

LOC116494255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116494255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol-binding clathrin assembly protein isoform X2
translation: MSGQSLTDRIAAAQHSVTGSAVAKAVCKATTHEVMGPKKKHLDYLIQCTNEMNVNIPQLADTLFERTANSSWVVVFKALITTHHLMMYGNERFIQYLASRNTLFNLNNYLDKSAMQGYDMSTFIRRYSRYLNEKALSYRLVAVDFTKMKRGIDGVMRTMNAEKLLKTLPIIQNQLDALLDFDANPNELTNGVINAAFMLLFKDSIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLARMTKLSEFLKVAEQVGIDQGDIPDLTQVSAPSSLLEALEQHLASLEGKKTKEVSAASRASALSSAVSTLSNTGMSFSRMDEKEKQQALEEEQARLQALKEQRLREISVVSNSTSTSASPSTLSGKSVNTTVAVDLFAVPAPTTNSMPNLSSDLFDLQPAFVPTVQSTPAISTSASSAWGGPFSSSNGCVGSPPHLDIFDMKPVEEAVKSTAPFINSTFSSKHTVELFSDDFSGHKSAYASVYHPLPVDGFPLHSAPPSTTPSTINVDFDAVFGGKSTAPEYRTTSDDVLQPTVPLQSQRAPSTNQQSGKILANDLDSSLANLVGNLGFGGTPSKKSDMQWTQPTEKKLTGGTNWQAKTSTSTTWNPTPLPTMPHMVPAPITYPVTTPQVPVYGMVPPQIGAAPLMAPQSMIYTQPGLRPTNPFAPVSGTQIQFM
SIO_010081: LOC116494255
subclass of: SO_0000673
so part of: LOC116494255
location: join(2605711..2605840,2612543..2612685,2613757..2613832,2614637..2614739,2614900..2614993,2615094..2615205,2616304..2616410,2616949..2616996,2621314..2621399,2622299..2622422,2624195..2624331,2624595..2624698,2625552..2625698,2626152..2626211,2626304..2626414,2627271..2627387,2627519..2627549,2628049..2628169,2630255..2630311,2630646..2630753,2631301..2631315)
location: region:2605711-2631315:1
so has part: feature:2605711-2605840:1:exon
so has part: feature:2612543-2612685:1:exon
so has part: feature:2613757-2613832:1:exon
so has part: feature:2614637-2614739:1:exon
so has part: feature:2614900-2614993:1:exon
so has part: feature:2615094-2615205:1:exon
so has part: feature:2616304-2616410:1:exon
so has part: feature:2616949-2616996:1:exon
so has part: feature:2621314-2621399:1:exon
so has part: feature:2622299-2622422:1:exon
so has part: feature:2624195-2624331:1:exon
so has part: feature:2624595-2624698:1:exon
so has part: feature:2625552-2625698:1:exon
so has part: feature:2626152-2626211:1:exon
so has part: feature:2626304-2626414:1:exon
so has part: feature:2627271-2627387:1:exon
so has part: feature:2627519-2627549:1:exon
so has part: feature:2628049-2628169:1:exon
so has part: feature:2630255-2630311:1:exon
so has part: feature:2630646-2630753:1:exon
so has part: feature:2631301-2631315:1:exon

XP_032051905.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2605711-2605840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2612543-2612685:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2613757-2613832:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2614637-2614739:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2614900-2614993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2615094-2615205:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2616304-2616410:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2616949-2616996:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2621314-2621399:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2622299-2622422:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2624195-2624331:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2624595-2624698:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2625552-2625698:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2626152-2626211:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2626304-2626414:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2627271-2627387:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2627519-2627549:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2628049-2628169:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2630255-2630311:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2630646-2630753:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2631301-2631315:1:exon

LOC116494255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116494255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol-binding clathrin assembly protein isoform X3
translation: MSGQSLTDRIAAAQHSVTGSAVAKAVCKATTHEVMGPKKKHLDYLIQCTNEMNVNIPQLADTLFERTANSSWVVVFKALITTHHLMMYGNERFIQYLASRNTLFNLNNYLDKSAMQGYDMSTFIRRYSRYLNEKALSYRLVAVDFTKMKRGIDGVMRTMNAEKLLKTLPIIQNQLDALLDFDANPNELTNGVINAAFMLLFKDSIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLARMTKLSEFLKVAEQVGIDQGDIPDLTQAPSSLLEALEQHLASLEGKKTKEVSAASRASALSSAVSTLSNTGMSFSRMDEKEKQQALEEEQARLQALKEQRLREISVVSNSTSTSASPSTLSGKSVNTTVAVDLFAVPAPTTNSMPNLSSDLFDLQPAFVPTVQSTPAISTSASSAWGGPFSSSNGCVGSPPHLDIFDMKPVEEAVKSTAPFINSTFSSKHTVELFSDDFSGHKSAYASVYHPLPVDGFPLHSAPPSTTPSTINVDFDAVFGGKSTAPEYRTTSDDVLQPTVPLQSQRAPSTNQQSGKILANDLDSSLANLVGNLGFGGTPSKKSDMQWTQPTEKKLTGGTNWQAKTSTSTTWNPTPLPTMPHMNGVHYPGYVPAPITYPVTTPQVPVYGMVPPQIGAAPLMAPQSMIYTQPGLRPTNPFAPVSGTQIQFM
SIO_010081: LOC116494255
subclass of: SO_0000673
so part of: LOC116494255
location: join(2605711..2605840,2612543..2612685,2613757..2613832,2614637..2614739,2614900..2614993,2615094..2615205,2616304..2616410,2616949..2616990,2621314..2621399,2622299..2622422,2624195..2624331,2624595..2624698,2625552..2625698,2626152..2626211,2626304..2626414,2627271..2627387,2627519..2627549,2628049..2628169,2630118..2630141,2630255..2630311,2630646..2630753,2631301..2631315)
location: region:2605711-2631315:1
so has part: feature:2605711-2605840:1:exon
so has part: feature:2612543-2612685:1:exon
so has part: feature:2613757-2613832:1:exon
so has part: feature:2614637-2614739:1:exon
so has part: feature:2614900-2614993:1:exon
so has part: feature:2615094-2615205:1:exon
so has part: feature:2616304-2616410:1:exon
so has part: feature:2616949-2616990:1:exon
so has part: feature:2621314-2621399:1:exon
so has part: feature:2622299-2622422:1:exon
so has part: feature:2624195-2624331:1:exon
so has part: feature:2624595-2624698:1:exon
so has part: feature:2625552-2625698:1:exon
so has part: feature:2626152-2626211:1:exon
so has part: feature:2626304-2626414:1:exon
so has part: feature:2627271-2627387:1:exon
so has part: feature:2627519-2627549:1:exon
so has part: feature:2628049-2628169:1:exon
so has part: feature:2630118-2630141:1:exon
so has part: feature:2630255-2630311:1:exon
so has part: feature:2630646-2630753:1:exon
so has part: feature:2631301-2631315:1:exon

XP_032051907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2605711-2605840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2612543-2612685:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2613757-2613832:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2614637-2614739:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2614900-2614993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2615094-2615205:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2616304-2616410:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2616949-2616990:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2621314-2621399:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2622299-2622422:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2624195-2624331:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2624595-2624698:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2625552-2625698:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2626152-2626211:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2626304-2626414:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2627271-2627387:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2627519-2627549:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2628049-2628169:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2630118-2630141:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2630255-2630311:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2630646-2630753:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2631301-2631315:1:exon

LOC116494255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116494255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol-binding clathrin assembly protein isoform X5
translation: MSGQSLTDRIAAAQHSVTGSAVAKAVCKATTHEVMGPKKKHLDYLIQCTNEMNVNIPQLADTLFERTANSSWVVVFKALITTHHLMMYGNERFIQYLASRNTLFNLNNYLDKSAMQGYDMSTFIRRYSRYLNEKALSYRLVAVDFTKMKRGIDGVMRTMNAEKLLKTLPIIQNQLDALLDFDANPNELTNGVINAAFMLLFKDSIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLARMTKLSEFLKVAEQVGIDQGDIPDLTQAPSSLLEALEQHLASLEGKKTKEVSAASRASALSSAVSTLSNTGMSFSRMDEKEKQQALEEEQARLQALKEQRLREISVVSNSTSTSASPSTLSGKSVNTTVAVDLFAVPAPTTNSMPNLSSDLFDLQPAFVPTVQSTPAISTSASSAWGGFPLHSAPPSTTPSTINVDFDAVFGGKSTAPEYRTTSDDVLQPTVPLQSQRAPSTNQQSGKILANDLDSSLANLVGNLGFGGTPSKKSDMQWTQPTEKKLTGGTNWQAKTSTSTTWNPTPLPTMPHMVPAPITYPVTTPQVPVYGMVPPQIGAAPLMAPQSMIYTQPGLRPTNPFAPVSGTQIQFM
SIO_010081: LOC116494255
subclass of: SO_0000673
so part of: LOC116494255
location: join(2605711..2605840,2612543..2612685,2613757..2613832,2614637..2614739,2614900..2614993,2615094..2615205,2616304..2616410,2616949..2616990,2621314..2621399,2622299..2622422,2624195..2624331,2624595..2624698,2626304..2626414,2627271..2627387,2627519..2627549,2628049..2628169,2630255..2630311,2630646..2630753,2631301..2631315)
location: region:2605711-2631315:1
so has part: feature:2605711-2605840:1:exon
so has part: feature:2612543-2612685:1:exon
so has part: feature:2613757-2613832:1:exon
so has part: feature:2614637-2614739:1:exon
so has part: feature:2614900-2614993:1:exon
so has part: feature:2615094-2615205:1:exon
so has part: feature:2616304-2616410:1:exon
so has part: feature:2616949-2616990:1:exon
so has part: feature:2621314-2621399:1:exon
so has part: feature:2622299-2622422:1:exon
so has part: feature:2624195-2624331:1:exon
so has part: feature:2624595-2624698:1:exon
so has part: feature:2626304-2626414:1:exon
so has part: feature:2627271-2627387:1:exon
so has part: feature:2627519-2627549:1:exon
so has part: feature:2628049-2628169:1:exon
so has part: feature:2630255-2630311:1:exon
so has part: feature:2630646-2630753:1:exon
so has part: feature:2631301-2631315:1:exon

XP_032051909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2605711-2605840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2612543-2612685:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2613757-2613832:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2614637-2614739:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2614900-2614993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2615094-2615205:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2616304-2616410:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2616949-2616990:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2621314-2621399:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2622299-2622422:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2624195-2624331:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2624595-2624698:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2626304-2626414:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2627271-2627387:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2627519-2627549:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2628049-2628169:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2630255-2630311:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2630646-2630753:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2631301-2631315:1:exon

LOC116494255
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116494255
product: prefoldin subunit 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196017.1
SIO_010081: LOC116494255
subclass of: SO_0000673
so part of: LOC116494255
location: join(2636967..2637048,2637662..2637786,2638812..2638878,2639330..2639428,2641163..2641301,2641822..2643032)
location: region:2636967-2643032:1
so has part: feature:2636967-2637048:1:exon
so has part: feature:2637662-2637786:1:exon
so has part: feature:2638812-2638878:1:exon
so has part: feature:2639330-2639428:1:exon
so has part: feature:2641163-2641301:1:exon
so has part: feature:2641822-2643032:1:exon

position:2636967:1
position: 2636967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2636967-2637048:1:exon

position:2637048:1
position: 2637048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2637662-2637786:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2638812-2638878:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2639330-2639428:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2641163-2641301:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2641822-2643032:1:exon

LOC116494255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116494255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prefoldin subunit 3 isoform X4
translation: MAAAGGEAAAGGARRGPLGIPEAVFVEDVDSFMKQPGNETADIVLKKLDEQYQKYKFLELNLAQKKRRLKSQIPEIKQTLEILKHMQKKKESTNPMETRFLLADNLYCKASVPPTDKVCLWLGANVMLEYDIDEAQALLEKNLSTATRNLDSLEEDLDFLRDQFTTTEVNMARVYNWDVKRRNKEDPSKNKA
SIO_010081: LOC116494255
subclass of: SO_0000673
so part of: LOC116494255
location: join(2636971..2637048,2637662..2637786,2638812..2638878,2639330..2639428,2641163..2641301,2641822..2641892)
location: region:2636971-2641892:1
so has part: feature:2636971-2637048:1:exon
so has part: feature:2637662-2637786:1:exon
so has part: feature:2638812-2638878:1:exon
so has part: feature:2639330-2639428:1:exon
so has part: feature:2641163-2641301:1:exon
so has part: feature:2641822-2641892:1:exon

XP_032051908.1
type: Protein
SIO_000068: ncbiprotein

position:2636971:1
position: 2636971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2636971-2637048:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2637662-2637786:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2638812-2638878:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2639330-2639428:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2641163-2641301:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2641822-2641892:1:exon

RAB39B
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: RAB39B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2644192..2651748)
location: region:2644192-2651748:-1
so has part: feature:2644192-2651748:-1:exon
subclass of: SO_0000010

116494312
type: Gene
SIO_000068: ncbigene

position:2644192:-1
position: 2644192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2651748:-1
position: 2651748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2644192-2651748:-1:exon

RAB39B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: RAB39B
product: RAB39B, member RAS oncogene family
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196134.1
SIO_010081: RAB39B
subclass of: SO_0000673
so part of: RAB39B
location: complement(join(2644192..2647926,2651508..2651748))
location: region:2644192-2651748:-1
so has part: feature:2651508-2651748:-1:exon
so has part: feature:2644192-2647926:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2651508-2651748:-1:exon

position:2651508:-1
position: 2651508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2644192-2647926:-1:exon

position:2647926:-1
position: 2647926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAB39B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: RAB39B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-39B
translation: MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQISDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEISIQEGWEGVKSGFVPNVVHSSEEVVKSDRRCLC
SIO_010081: RAB39B
subclass of: SO_0000673
so part of: RAB39B
location: complement(join(2647500..2647926,2651508..2651722))
location: region:2647500-2651722:-1
so has part: feature:2651508-2651722:-1:exon
so has part: feature:2647500-2647926:-1:exon

XP_032052025.1
type: Protein
SIO_000068: ncbiprotein

position:2647500:-1
position: 2647500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2651722:-1
position: 2651722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2651508-2651722:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2647500-2647926:-1:exon

LOC116494565
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116494565
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2659377..2682317)
location: region:2659377-2682317:-1
so has part: feature:2659377-2682317:-1:exon
subclass of: SO_0000010

116494565
type: Gene
SIO_000068: ncbigene

position:2659377:-1
position: 2659377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2682317:-1
position: 2682317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2659377-2682317:-1:exon

LOC116494565
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116494565
product: synaptotagmin-like protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032196492.1
SIO_010081: LOC116494565
subclass of: SO_0000673
so part of: LOC116494565
location: complement(join(2659377..2660799,2662583..2662788,2663932..2664031,2664607..2664685,2664953..2665114,2665288..2665390,2666300..2666469,2668403..2668504,2668900..2668991,2670648..2670746,2672032..2673138,2673759..2673852,2674327..2674420,2675670..2675763,2680339..2680490,2682131..2682317))
location: region:2659377-2682317:-1
so has part: feature:2682131-2682317:-1:exon
so has part: feature:2680339-2680490:-1:exon
so has part: feature:2675670-2675763:-1:exon
so has part: feature:2674327-2674420:-1:exon
so has part: feature:2673759-2673852:-1:exon
so has part: feature:2672032-2673138:-1:exon
so has part: feature:2670648-2670746:-1:exon
so has part: feature:2668900-2668991:-1:exon
so has part: feature:2668403-2668504:-1:exon
so has part: feature:2666300-2666469:-1:exon
so has part: feature:2665288-2665390:-1:exon
so has part: feature:2664953-2665114:-1:exon
so has part: feature:2664607-2664685:-1:exon
so has part: feature:2663932-2664031:-1:exon
so has part: feature:2662583-2662788:-1:exon
so has part: feature:2659377-2660799:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2682131-2682317:-1:exon

position:2682131:-1
position: 2682131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2680339-2680490:-1:exon

position:2680339:-1
position: 2680339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2680490:-1
position: 2680490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2675670-2675763:-1:exon

position:2675670:-1
position: 2675670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2675763:-1
position: 2675763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2674327-2674420:-1:exon

position:2674327:-1
position: 2674327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2674420:-1
position: 2674420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2673759-2673852:-1:exon

position:2673759:-1
position: 2673759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2673852:-1
position: 2673852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2672032-2673138:-1:exon

position:2672032:-1
position: 2672032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2673138:-1
position: 2673138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2670648-2670746:-1:exon

position:2670648:-1
position: 2670648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2670746:-1
position: 2670746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2668900-2668991:-1:exon

position:2668900:-1
position: 2668900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2668991:-1
position: 2668991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2668403-2668504:-1:exon

position:2668403:-1
position: 2668403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2668504:-1
position: 2668504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2666300-2666469:-1:exon

position:2666300:-1
position: 2666300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2666469:-1
position: 2666469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2665288-2665390:-1:exon

position:2665288:-1
position: 2665288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2665390:-1
position: 2665390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2664953-2665114:-1:exon

position:2664953:-1
position: 2664953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2665114:-1
position: 2665114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2664607-2664685:-1:exon

position:2664607:-1
position: 2664607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2664685:-1
position: 2664685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2663932-2664031:-1:exon

position:2663932:-1
position: 2663932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2664031:-1
position: 2664031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2662583-2662788:-1:exon

position:2662583:-1
position: 2662583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2662788:-1
position: 2662788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2659377-2660799:-1:exon

position:2660799:-1
position: 2660799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116494565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116494565
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-like protein 4
translation: MLDLSFLTEEEYEKLMKVLQRDAELKKKDGDRIRRIQGSIKDEKKKKFVTGEWFSEVKAKRFQEDLEGSDLLRASIRRKKGKVENEVNEHIRRGLDSRDAPGPPFHEHAAGTGEERSSTPILDAAEEHKILPKPKPRLSVPLSASHKRSSIHDVSSSESDTGASPFTATTGSLHLSRKGNGRSPLPAMLPEDAVPQPSCAAGGKAVDGATGTTAGPKTPPEETYAPSKIPVKRKSSRTLPRSEQFVNHLGPAENSMAKRELMESPKSLTAEGESSQSVKHSVNYTISSMSNKEEDIGLDREHFKNLKNFWEKGADSVMVGSMPEDSSSGEADGKQFKLCRSLSVQSAQGQNGEEKPGVFTKTRAPHKRTITLSSSEEEPSYVAPSRKGSVAFIPRSTYAKSKGGLVTRNSLLGESNGKPPVPEEEKMAQHSSKKSRLPVRAPSIKIESPTKEVSGSTSEPEMSADKFIVAEKHKYANCLASRVQILIDPVLTDDEKEQRADMGTHDSMEINGEPAEEKALESSDKPTGRAPGGETEVVQGTDSAVYSEEDGDRSPAAQALARANNINLAKSMVNIYTTTETYNKPHLIPHQFLEPERVKELSRSSPLLLSETESDTASEISFQFSKHKKTPSIGSHSSDMASVSSVSGSVLSVYSGDFGSVDAQGTVEFALDYDEKNREFQVHVSQCKDLAVVDEKKGRSDPYVKTYLLPDKARMGKRKTSVKKRTVNPIYNEVLRYKIEKMVLLIQKLNLSVWHNDPLGRNSFLGEIEIDLASWDWSNRKLNWYPLKPRSLSAVNGVDHRGVMNLSIKYVPPGSLGPKNPPSGEVHIWVKDVKDLLQLRPSGVDSFVKCYVLPDTSKKSYQKTRVIKRDTNPIFNHTIVYDGFHTEDLKDACVELTVWDHEKLTNHFLGGIRLGLGTGLSYGISVDWMDSTQEEVAFWQEMMSATNEWIEGLLPLRSLAGRKKLK
SIO_010081: LOC116494565
subclass of: SO_0000673
so part of: LOC116494565
location: complement(join(2660654..2660799,2662583..2662788,2663932..2664031,2664607..2664685,2664953..2665114,2665288..2665390,2666300..2666469,2668403..2668504,2668900..2668991,2670648..2670746,2672032..2673138,2673759..2673852,2674327..2674420,2675670..2675763,2680339..2680490,2682131..2682231))
location: region:2660654-2682231:-1
so has part: feature:2682131-2682231:-1:exon
so has part: feature:2680339-2680490:-1:exon
so has part: feature:2675670-2675763:-1:exon
so has part: feature:2674327-2674420:-1:exon
so has part: feature:2673759-2673852:-1:exon
so has part: feature:2672032-2673138:-1:exon
so has part: feature:2670648-2670746:-1:exon
so has part: feature:2668900-2668991:-1:exon
so has part: feature:2668403-2668504:-1:exon
so has part: feature:2666300-2666469:-1:exon
so has part: feature:2665288-2665390:-1:exon
so has part: feature:2664953-2665114:-1:exon
so has part: feature:2664607-2664685:-1:exon
so has part: feature:2663932-2664031:-1:exon
so has part: feature:2662583-2662788:-1:exon
so has part: feature:2660654-2660799:-1:exon

XP_032052383.1
type: Protein
SIO_000068: ncbiprotein

position:2660654:-1
position: 2660654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2682231:-1
position: 2682231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2682131-2682231:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2680339-2680490:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2675670-2675763:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2674327-2674420:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2673759-2673852:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2672032-2673138:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2670648-2670746:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2668900-2668991:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2668403-2668504:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2666300-2666469:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2665288-2665390:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2664953-2665114:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2664607-2664685:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2663932-2664031:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2662583-2662788:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2660654-2660799:-1:exon

VSIG1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: VSIG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2704700..2727108
location: region:2704700-2727108:1
so has part: feature:2704700-2727108:1:exon
subclass of: SO_0000010

116494599
type: Gene
SIO_000068: ncbigene

position:2704700:1
position: 2704700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2727108:1
position: 2727108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2704700-2727108:1:exon

VSIG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: VSIG1
product: V-set and immunoglobulin domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_032196549.1
SIO_010081: VSIG1
subclass of: SO_0000673
so part of: VSIG1
location: join(2704700..2704748,2707638..2707798,2713646..2713753,2720060..2720258,2723754..2723909,2724635..2724754,2725419..2725545,2726925..2727108)
location: region:2704700-2727108:1
so has part: feature:2704700-2704748:1:exon
so has part: feature:2707638-2707798:1:exon
so has part: feature:2713646-2713753:1:exon
so has part: feature:2720060-2720258:1:exon
so has part: feature:2723754-2723909:1:exon
so has part: feature:2724635-2724754:1:exon
so has part: feature:2725419-2725545:1:exon
so has part: feature:2726925-2727108:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2704700-2704748:1:exon

position:2704748:1
position: 2704748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2707638-2707798:1:exon

position:2707638:1
position: 2707638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2707798:1
position: 2707798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2713646-2713753:1:exon

position:2713646:1
position: 2713646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2713753:1
position: 2713753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2720060-2720258:1:exon

position:2720060:1
position: 2720060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2720258:1
position: 2720258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2723754-2723909:1:exon

position:2723754:1
position: 2723754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2723909:1
position: 2723909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2724635-2724754:1:exon

position:2724635:1
position: 2724635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2724754:1
position: 2724754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2725419-2725545:1:exon

position:2725419:1
position: 2725419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2725545:1
position: 2725545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2726925-2727108:1:exon

position:2726925:1
position: 2726925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VSIG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: VSIG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: V-set and immunoglobulin domain-containing protein 1
translation: MFATMLKILPILATFAGHAGSVVVTVPEKIVNVTTGGNATLLCTYASSQPLGNFFIQWSFYSAKESQLHTHSPCHGILSMDEKSVSHCQKMVYVTDARGRCSWRYKIYYYSGGQSYSYGEFKNRITAATGPGNASITISNMQPSDTGSYTCEVFSPLNDAGQSQKSVIVNVLVKPSKPFCKIEGTPEKGHLIYLLCKCEEGLPHPTYHWYKVDDSTLTPVTEQFNPNTGILYIGNLTTFETGYYRCIASNVMGNSTCELDLTSMHSDSAIVAGALIGAIVAAVIICVIVWVLTKKAKKKKSSSNEMQVMAQKQSNAEYVQVPNEENIPATTVPSSNMTNEYPSVDETAASGTPENDEKQDVEKEETA
SIO_010081: VSIG1
subclass of: SO_0000673
so part of: VSIG1
location: join(2704700..2704748,2707638..2707798,2713646..2713753,2720060..2720258,2723754..2723909,2724635..2724754,2725419..2725545,2726925..2727108)
location: region:2704700-2727108:1
so has part: feature:2704700-2704748:1:exon
so has part: feature:2707638-2707798:1:exon
so has part: feature:2713646-2713753:1:exon
so has part: feature:2720060-2720258:1:exon
so has part: feature:2723754-2723909:1:exon
so has part: feature:2724635-2724754:1:exon
so has part: feature:2725419-2725545:1:exon
so has part: feature:2726925-2727108:1:exon

XP_032052440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2704700-2704748:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2707638-2707798:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2713646-2713753:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2720060-2720258:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2723754-2723909:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2724635-2724754:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2725419-2725545:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2726925-2727108:1:exon

PSMD10
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: PSMD10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2732170..2735940)
location: region:2732170-2735940:-1
so has part: feature:2732170-2735940:-1:exon
subclass of: SO_0000010

116494494
type: Gene
SIO_000068: ncbigene

position:2732170:-1
position: 2732170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2735940:-1
position: 2735940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2732170-2735940:-1:exon

PSMD10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: PSMD10
product: proteasome 26S subunit, non-ATPase 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196410.1
SIO_010081: PSMD10
subclass of: SO_0000673
so part of: PSMD10
location: complement(join(2732170..2732722,2733731..2733897,2734007..2734153,2735603..2735701,2735814..2735940))
location: region:2732170-2735940:-1
so has part: feature:2735814-2735940:-1:exon
so has part: feature:2735603-2735701:-1:exon
so has part: feature:2734007-2734153:-1:exon
so has part: feature:2733731-2733897:-1:exon
so has part: feature:2732170-2732722:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2735814-2735940:-1:exon

position:2735814:-1
position: 2735814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2735603-2735701:-1:exon

position:2735603:-1
position: 2735603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2735701:-1
position: 2735701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2734007-2734153:-1:exon

position:2734007:-1
position: 2734007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2734153:-1
position: 2734153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2733731-2733897:-1:exon

position:2733731:-1
position: 2733731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2733897:-1
position: 2733897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2732170-2732722:-1:exon

position:2732722:-1
position: 2732722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSMD10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: PSMD10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 26S proteasome non-ATPase regulatory subunit 10
translation: MAGAASVSEVAVCNMAYGGRLDELRAQLQRDRGLATAADQAGRTALHWACSAGHAAVADLLLGLGVPVSEKDDAGWTPLHIAASAGRDEIVKALLDKGAHVNAVNQNGCTPLHYAASKNKQEIAVMLLENGADPDATDHFESTPLHRAAAKGNLKMIQILLRHKASVNIQDSEGNTPLHLACDEERVEEAKLLVSHGASIHIENKEELTPLKVAKGGLGAILKRMVEG
SIO_010081: PSMD10
subclass of: SO_0000673
so part of: PSMD10
location: complement(join(2732569..2732722,2733731..2733897,2734007..2734153,2735603..2735701,2735814..2735933))
location: region:2732569-2735933:-1
so has part: feature:2735814-2735933:-1:exon
so has part: feature:2735603-2735701:-1:exon
so has part: feature:2734007-2734153:-1:exon
so has part: feature:2733731-2733897:-1:exon
so has part: feature:2732569-2732722:-1:exon

XP_032052301.1
type: Protein
SIO_000068: ncbiprotein

position:2732569:-1
position: 2732569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2735933:-1
position: 2735933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2735814-2735933:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2735603-2735701:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2734007-2734153:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2733731-2733897:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2732569-2732722:-1:exon

ATG4A
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: ATG4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2736112..2747867
location: region:2736112-2747867:1
so has part: feature:2736112-2747867:1:exon
subclass of: SO_0000010

116494406
type: Gene
SIO_000068: ncbigene

position:2736112:1
position: 2736112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2747867:1
position: 2747867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2736112-2747867:1:exon

ATG4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ATG4A
product: autophagy related 4A cysteine peptidase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032196292.1
SIO_010081: ATG4A
subclass of: SO_0000673
so part of: ATG4A
location: join(2736112..2736161,2737245..2737316,2738440..2738511,2738975..2739073,2739870..2739971,2740527..2740599,2741938..2742017,2742554..2742741,2742851..2742929,2743807..2743952,2745005..2745061,2746202..2746313,2746583..2747867)
location: region:2736112-2747867:1
so has part: feature:2736112-2736161:1:exon
so has part: feature:2737245-2737316:1:exon
so has part: feature:2738440-2738511:1:exon
so has part: feature:2738975-2739073:1:exon
so has part: feature:2739870-2739971:1:exon
so has part: feature:2740527-2740599:1:exon
so has part: feature:2741938-2742017:1:exon
so has part: feature:2742554-2742741:1:exon
so has part: feature:2742851-2742929:1:exon
so has part: feature:2743807-2743952:1:exon
so has part: feature:2745005-2745061:1:exon
so has part: feature:2746202-2746313:1:exon
so has part: feature:2746583-2747867:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2736112-2736161:1:exon

position:2736161:1
position: 2736161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2737245-2737316:1:exon

position:2737245:1
position: 2737245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2737316:1
position: 2737316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2738440-2738511:1:exon

position:2738440:1
position: 2738440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2738511:1
position: 2738511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2738975-2739073:1:exon

position:2738975:1
position: 2738975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2739073:1
position: 2739073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2739870-2739971:1:exon

position:2739870:1
position: 2739870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2739971:1
position: 2739971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2740527-2740599:1:exon

position:2740527:1
position: 2740527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2740599:1
position: 2740599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2741938-2742017:1:exon

position:2741938:1
position: 2741938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2742017:1
position: 2742017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2742554-2742741:1:exon

position:2742554:1
position: 2742554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2742741:1
position: 2742741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2742851-2742929:1:exon

position:2742851:1
position: 2742851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2742929:1
position: 2742929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2743807-2743952:1:exon

position:2743807:1
position: 2743807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2743952:1
position: 2743952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2745005-2745061:1:exon

position:2745005:1
position: 2745005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2745061:1
position: 2745061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2746202-2746313:1:exon

position:2746202:1
position: 2746202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2746313:1
position: 2746313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2746583-2747867:1:exon

position:2746583:1
position: 2746583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATG4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ATG4A
product: autophagy related 4A cysteine peptidase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196291.1
SIO_010081: ATG4A
subclass of: SO_0000673
so part of: ATG4A
location: join(2736114..2736161,2737206..2737316,2738440..2738511,2738975..2739073,2739870..2739971,2740527..2740599,2741938..2742017,2742554..2742741,2742851..2742929,2743807..2743952,2745005..2745061,2746202..2746313,2746583..2747867)
location: region:2736114-2747867:1
so has part: feature:2736114-2736161:1:exon
so has part: feature:2737206-2737316:1:exon
so has part: feature:2738440-2738511:1:exon
so has part: feature:2738975-2739073:1:exon
so has part: feature:2739870-2739971:1:exon
so has part: feature:2740527-2740599:1:exon
so has part: feature:2741938-2742017:1:exon
so has part: feature:2742554-2742741:1:exon
so has part: feature:2742851-2742929:1:exon
so has part: feature:2743807-2743952:1:exon
so has part: feature:2745005-2745061:1:exon
so has part: feature:2746202-2746313:1:exon
so has part: feature:2746583-2747867:1:exon

position:2736114:1
position: 2736114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2736114-2736161:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2737206-2737316:1:exon

position:2737206:1
position: 2737206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2738440-2738511:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2738975-2739073:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2739870-2739971:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2740527-2740599:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2741938-2742017:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2742554-2742741:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2742851-2742929:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2743807-2743952:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2745005-2745061:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2746202-2746313:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2746583-2747867:1:exon

ATG4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: ATG4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine protease ATG4A isoform X1
translation: MESVLSRYENQITILSDCLEEFPETDEPVWILGRQHHLNADKSKLLLDISARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWQWEKHKKQPEEYHRILRCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIEDIKKMCWSPPQSSSASHSSAHWHRSALGRSKNTGGLCTGWKPLLLIIPLRLGINHINPVYIDAFKECFKMPQSLGALGGKPNNAYYFIGFLGNELIYLDPHTTQSFVDSEENGTVDDESFHCQEAPHRMKIMNLDPSVALGFFCKEECDFDNWCSLVQKEILKQQSLRMFELVQKHPPHWPPFIPPTKPEVTTTGAELIESTDKLFELEEEFEILSV
SIO_010081: ATG4A
subclass of: SO_0000673
so part of: ATG4A
location: join(2736152..2736161,2737206..2737316,2738440..2738511,2738975..2739073,2739870..2739971,2740527..2740599,2741938..2742017,2742554..2742741,2742851..2742929,2743807..2743952,2745005..2745061,2746202..2746313,2746583..2746647)
location: region:2736152-2746647:1
so has part: feature:2736152-2736161:1:exon
so has part: feature:2737206-2737316:1:exon
so has part: feature:2738440-2738511:1:exon
so has part: feature:2738975-2739073:1:exon
so has part: feature:2739870-2739971:1:exon
so has part: feature:2740527-2740599:1:exon
so has part: feature:2741938-2742017:1:exon
so has part: feature:2742554-2742741:1:exon
so has part: feature:2742851-2742929:1:exon
so has part: feature:2743807-2743952:1:exon
so has part: feature:2745005-2745061:1:exon
so has part: feature:2746202-2746313:1:exon
so has part: feature:2746583-2746647:1:exon

XP_032052182.1
type: Protein
SIO_000068: ncbiprotein

position:2736152:1
position: 2736152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2746647:1
position: 2746647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2736152-2736161:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2737206-2737316:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2738440-2738511:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2738975-2739073:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2739870-2739971:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2740527-2740599:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2741938-2742017:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2742554-2742741:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2742851-2742929:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2743807-2743952:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2745005-2745061:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2746202-2746313:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2746583-2746647:1:exon

ATG4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: ATG4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine protease ATG4A isoform X2
translation: MESDCLEEFPETDEPVWILGRQHHLNADKSKLLLDISARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWQWEKHKKQPEEYHRILRCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIEDIKKMCWSPPQSSSASHSSAHWHRSALGRSKNTGGLCTGWKPLLLIIPLRLGINHINPVYIDAFKECFKMPQSLGALGGKPNNAYYFIGFLGNELIYLDPHTTQSFVDSEENGTVDDESFHCQEAPHRMKIMNLDPSVALGFFCKEECDFDNWCSLVQKEILKQQSLRMFELVQKHPPHWPPFIPPTKPEVTTTGAELIESTDKLFELEEEFEILSV
SIO_010081: ATG4A
subclass of: SO_0000673
so part of: ATG4A
location: join(2736152..2736161,2737245..2737316,2738440..2738511,2738975..2739073,2739870..2739971,2740527..2740599,2741938..2742017,2742554..2742741,2742851..2742929,2743807..2743952,2745005..2745061,2746202..2746313,2746583..2746647)
location: region:2736152-2746647:1
so has part: feature:2736152-2736161:1:exon
so has part: feature:2737245-2737316:1:exon
so has part: feature:2738440-2738511:1:exon
so has part: feature:2738975-2739073:1:exon
so has part: feature:2739870-2739971:1:exon
so has part: feature:2740527-2740599:1:exon
so has part: feature:2741938-2742017:1:exon
so has part: feature:2742554-2742741:1:exon
so has part: feature:2742851-2742929:1:exon
so has part: feature:2743807-2743952:1:exon
so has part: feature:2745005-2745061:1:exon
so has part: feature:2746202-2746313:1:exon
so has part: feature:2746583-2746647:1:exon

XP_032052183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2736152-2736161:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2737245-2737316:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2738440-2738511:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2738975-2739073:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2739870-2739971:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2740527-2740599:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2741938-2742017:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2742554-2742741:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2742851-2742929:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2743807-2743952:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2745005-2745061:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2746202-2746313:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2746583-2746647:1:exon

COL4A6
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: COL4A6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2745798..2881723)
location: region:2745798-2881723:-1
so has part: feature:2745798-2881723:-1:exon
subclass of: SO_0000010

116494405
type: Gene
SIO_000068: ncbigene

position:2745798:-1
position: 2745798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2881723:-1
position: 2881723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2745798-2881723:-1:exon

COL4A6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: COL4A6
product: collagen type IV alpha 6 chain, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196289.1
SIO_010081: COL4A6
subclass of: SO_0000673
so part of: COL4A6
location: complement(join(2745798..2750555,2751111..2751397,2751623..2751814,2752548..2752664,2754116..2754262,2754533..2754631,2756061..2756222,2756955..2757071,2757431..2757556,2758002..2758073,2758498..2758605,2759198..2759305,2759711..2759785,2760285..2760348,2760609..2760790,2761106..2761231,2761473..2761616,2762285..2762455,2764466..2764627,2764891..2765112,2766247..2766354,2766752..2766823,2769370..2769553,2770151..2770330,2771205..2771365,2772268..2772372,2774435..2774584,2775416..2775526,2775847..2775916,2777138..2777191,2778210..2778254,2779004..2779063,2780441..2780494,2781536..2781628,2782479..2782520,2782622..2782657,2783230..2783292,2783716..2783751,2785170..2785238,2787001..2787117,2792575..2792619,2794310..2794444,2837137..2837220,2881199..2881253,2881352..2881723))
location: region:2745798-2881723:-1
so has part: feature:2881352-2881723:-1:exon
so has part: feature:2881199-2881253:-1:exon
so has part: feature:2837137-2837220:-1:exon
so has part: feature:2794310-2794444:-1:exon
so has part: feature:2792575-2792619:-1:exon
so has part: feature:2787001-2787117:-1:exon
so has part: feature:2785170-2785238:-1:exon
so has part: feature:2783716-2783751:-1:exon
so has part: feature:2783230-2783292:-1:exon
so has part: feature:2782622-2782657:-1:exon
so has part: feature:2782479-2782520:-1:exon
so has part: feature:2781536-2781628:-1:exon
so has part: feature:2780441-2780494:-1:exon
so has part: feature:2779004-2779063:-1:exon
so has part: feature:2778210-2778254:-1:exon
so has part: feature:2777138-2777191:-1:exon
so has part: feature:2775847-2775916:-1:exon
so has part: feature:2775416-2775526:-1:exon
so has part: feature:2774435-2774584:-1:exon
so has part: feature:2772268-2772372:-1:exon
so has part: feature:2771205-2771365:-1:exon
so has part: feature:2770151-2770330:-1:exon
so has part: feature:2769370-2769553:-1:exon
so has part: feature:2766752-2766823:-1:exon
so has part: feature:2766247-2766354:-1:exon
so has part: feature:2764891-2765112:-1:exon
so has part: feature:2764466-2764627:-1:exon
so has part: feature:2762285-2762455:-1:exon
so has part: feature:2761473-2761616:-1:exon
so has part: feature:2761106-2761231:-1:exon
so has part: feature:2760609-2760790:-1:exon
so has part: feature:2760285-2760348:-1:exon
so has part: feature:2759711-2759785:-1:exon
so has part: feature:2759198-2759305:-1:exon
so has part: feature:2758498-2758605:-1:exon
so has part: feature:2758002-2758073:-1:exon
so has part: feature:2757431-2757556:-1:exon
so has part: feature:2756955-2757071:-1:exon
so has part: feature:2756061-2756222:-1:exon
so has part: feature:2754533-2754631:-1:exon
so has part: feature:2754116-2754262:-1:exon
so has part: feature:2752548-2752664:-1:exon
so has part: feature:2751623-2751814:-1:exon
so has part: feature:2751111-2751397:-1:exon
so has part: feature:2745798-2750555:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2881352-2881723:-1:exon

position:2881352:-1
position: 2881352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2881199-2881253:-1:exon

position:2881199:-1
position: 2881199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2881253:-1
position: 2881253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2837137-2837220:-1:exon

position:2837137:-1
position: 2837137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2837220:-1
position: 2837220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2794310-2794444:-1:exon

position:2794310:-1
position: 2794310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2794444:-1
position: 2794444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2792575-2792619:-1:exon

position:2792575:-1
position: 2792575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2792619:-1
position: 2792619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2787001-2787117:-1:exon

position:2787001:-1
position: 2787001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2787117:-1
position: 2787117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2785170-2785238:-1:exon

position:2785170:-1
position: 2785170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2785238:-1
position: 2785238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2783716-2783751:-1:exon

position:2783716:-1
position: 2783716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2783751:-1
position: 2783751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2783230-2783292:-1:exon

position:2783230:-1
position: 2783230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2783292:-1
position: 2783292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2782622-2782657:-1:exon

position:2782622:-1
position: 2782622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2782657:-1
position: 2782657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2782479-2782520:-1:exon

position:2782479:-1
position: 2782479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2782520:-1
position: 2782520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2781536-2781628:-1:exon

position:2781536:-1
position: 2781536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2781628:-1
position: 2781628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2780441-2780494:-1:exon

position:2780441:-1
position: 2780441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2780494:-1
position: 2780494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2779004-2779063:-1:exon

position:2779004:-1
position: 2779004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2779063:-1
position: 2779063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2778210-2778254:-1:exon

position:2778210:-1
position: 2778210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2778254:-1
position: 2778254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2777138-2777191:-1:exon

position:2777138:-1
position: 2777138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2777191:-1
position: 2777191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2775847-2775916:-1:exon

position:2775847:-1
position: 2775847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2775916:-1
position: 2775916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2775416-2775526:-1:exon

position:2775416:-1
position: 2775416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2775526:-1
position: 2775526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2774435-2774584:-1:exon

position:2774435:-1
position: 2774435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2774584:-1
position: 2774584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2772268-2772372:-1:exon

position:2772268:-1
position: 2772268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2772372:-1
position: 2772372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2771205-2771365:-1:exon

position:2771205:-1
position: 2771205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2771365:-1
position: 2771365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2770151-2770330:-1:exon

position:2770151:-1
position: 2770151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2770330:-1
position: 2770330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2769370-2769553:-1:exon

position:2769370:-1
position: 2769370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2769553:-1
position: 2769553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2766752-2766823:-1:exon

position:2766752:-1
position: 2766752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2766823:-1
position: 2766823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2766247-2766354:-1:exon

position:2766247:-1
position: 2766247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2766354:-1
position: 2766354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2764891-2765112:-1:exon

position:2764891:-1
position: 2764891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2765112:-1
position: 2765112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2764466-2764627:-1:exon

position:2764466:-1
position: 2764466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2764627:-1
position: 2764627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2762285-2762455:-1:exon

position:2762285:-1
position: 2762285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2762455:-1
position: 2762455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2761473-2761616:-1:exon

position:2761473:-1
position: 2761473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2761616:-1
position: 2761616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2761106-2761231:-1:exon

position:2761106:-1
position: 2761106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2761231:-1
position: 2761231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2760609-2760790:-1:exon

position:2760609:-1
position: 2760609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2760790:-1
position: 2760790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2760285-2760348:-1:exon

position:2760285:-1
position: 2760285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2760348:-1
position: 2760348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2759711-2759785:-1:exon

position:2759711:-1
position: 2759711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2759785:-1
position: 2759785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:2759198-2759305:-1:exon

position:2759198:-1
position: 2759198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2759305:-1
position: 2759305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:2758498-2758605:-1:exon

position:2758498:-1
position: 2758498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2758605:-1
position: 2758605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:2758002-2758073:-1:exon

position:2758002:-1
position: 2758002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2758073:-1
position: 2758073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:2757431-2757556:-1:exon

position:2757431:-1
position: 2757431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2757556:-1
position: 2757556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:2756955-2757071:-1:exon

position:2756955:-1
position: 2756955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2757071:-1
position: 2757071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:2756061-2756222:-1:exon

position:2756061:-1
position: 2756061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2756222:-1
position: 2756222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:2754533-2754631:-1:exon

position:2754533:-1
position: 2754533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2754631:-1
position: 2754631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:2754116-2754262:-1:exon

position:2754116:-1
position: 2754116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2754262:-1
position: 2754262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:2752548-2752664:-1:exon

position:2752548:-1
position: 2752548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2752664:-1
position: 2752664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:2751623-2751814:-1:exon

position:2751623:-1
position: 2751623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2751814:-1
position: 2751814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:2751111-2751397:-1:exon

position:2751111:-1
position: 2751111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2751397:-1
position: 2751397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:2745798-2750555:-1:exon

position:2750555:-1
position: 2750555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

COL4A6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: COL4A6
product: collagen type IV alpha 6 chain, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196288.1
SIO_010081: COL4A6
subclass of: SO_0000673
so part of: COL4A6
location: complement(join(2745798..2750555,2751111..2751397,2751623..2751814,2752548..2752664,2754116..2754262,2754533..2754631,2756061..2756222,2756955..2757071,2757431..2757556,2758002..2758073,2758498..2758605,2759198..2759305,2759711..2759785,2760285..2760348,2760609..2760790,2761106..2761231,2761473..2761616,2762285..2762455,2763512..2763520,2764466..2764627,2764891..2765112,2766247..2766354,2766752..2766823,2769370..2769553,2770151..2770330,2771205..2771365,2772268..2772372,2774435..2774584,2775416..2775526,2775847..2775916,2777138..2777191,2778210..2778254,2779004..2779063,2780441..2780494,2781536..2781628,2782479..2782520,2782622..2782657,2783230..2783292,2783716..2783751,2785170..2785238,2787001..2787117,2792575..2792619,2794310..2794444,2837137..2837220,2881199..2881253,2881352..2881723))
location: region:2745798-2881723:-1
so has part: feature:2881352-2881723:-1:exon
so has part: feature:2881199-2881253:-1:exon
so has part: feature:2837137-2837220:-1:exon
so has part: feature:2794310-2794444:-1:exon
so has part: feature:2792575-2792619:-1:exon
so has part: feature:2787001-2787117:-1:exon
so has part: feature:2785170-2785238:-1:exon
so has part: feature:2783716-2783751:-1:exon
so has part: feature:2783230-2783292:-1:exon
so has part: feature:2782622-2782657:-1:exon
so has part: feature:2782479-2782520:-1:exon
so has part: feature:2781536-2781628:-1:exon
so has part: feature:2780441-2780494:-1:exon
so has part: feature:2779004-2779063:-1:exon
so has part: feature:2778210-2778254:-1:exon
so has part: feature:2777138-2777191:-1:exon
so has part: feature:2775847-2775916:-1:exon
so has part: feature:2775416-2775526:-1:exon
so has part: feature:2774435-2774584:-1:exon
so has part: feature:2772268-2772372:-1:exon
so has part: feature:2771205-2771365:-1:exon
so has part: feature:2770151-2770330:-1:exon
so has part: feature:2769370-2769553:-1:exon
so has part: feature:2766752-2766823:-1:exon
so has part: feature:2766247-2766354:-1:exon
so has part: feature:2764891-2765112:-1:exon
so has part: feature:2764466-2764627:-1:exon
so has part: feature:2763512-2763520:-1:exon
so has part: feature:2762285-2762455:-1:exon
so has part: feature:2761473-2761616:-1:exon
so has part: feature:2761106-2761231:-1:exon
so has part: feature:2760609-2760790:-1:exon
so has part: feature:2760285-2760348:-1:exon
so has part: feature:2759711-2759785:-1:exon
so has part: feature:2759198-2759305:-1:exon
so has part: feature:2758498-2758605:-1:exon
so has part: feature:2758002-2758073:-1:exon
so has part: feature:2757431-2757556:-1:exon
so has part: feature:2756955-2757071:-1:exon
so has part: feature:2756061-2756222:-1:exon
so has part: feature:2754533-2754631:-1:exon
so has part: feature:2754116-2754262:-1:exon
so has part: feature:2752548-2752664:-1:exon
so has part: feature:2751623-2751814:-1:exon
so has part: feature:2751111-2751397:-1:exon
so has part: feature:2745798-2750555:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2881352-2881723:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2881199-2881253:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2837137-2837220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2794310-2794444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2792575-2792619:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2787001-2787117:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2785170-2785238:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2783716-2783751:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2783230-2783292:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2782622-2782657:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2782479-2782520:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2781536-2781628:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2780441-2780494:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2779004-2779063:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2778210-2778254:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2777138-2777191:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2775847-2775916:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2775416-2775526:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2774435-2774584:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2772268-2772372:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2771205-2771365:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2770151-2770330:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2769370-2769553:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2766752-2766823:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2766247-2766354:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2764891-2765112:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2764466-2764627:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2763512-2763520:-1:exon

position:2763512:-1
position: 2763512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2763520:-1
position: 2763520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2762285-2762455:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2761473-2761616:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2761106-2761231:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2760609-2760790:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2760285-2760348:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2759711-2759785:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2759198-2759305:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2758498-2758605:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2758002-2758073:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2757431-2757556:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2756955-2757071:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2756061-2756222:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2754533-2754631:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2754116-2754262:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2752548-2752664:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2751623-2751814:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2751111-2751397:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2745798-2750555:-1:exon

COL4A6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: COL4A6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-6(IV) chain isoform X2
translation: MGCAGLLWVLLLLVCLGMEPASGGGKKSYTGPCGGRDCSAGCKCFPEKGARGRPGPIGIQGPIGAPGFTGPEGLPGAKGERGAVGPPGPPGHKGIKGSMGVPGFQGINGIPGHPGQSGPRGLPGLDGCNGTIGSPGVPGTDGFPGIPGLPGRPGPKGLKGEPVFAQGSLKGMKGENGLPGLDGISGPKGFPGPTGSAGPIGLPGLQGPVGPPGPPGPKGNMGLGFQGEKGEKGDVGLPGPPGPPPSTGILEFMGFPKGKQGEKGEPGLQGLPGEKGLPGLPGFGGVGEKGEKGVPGLPGGRGLLGLDGSDGIPGRKGHPGVPGYPGLDGVEGTKGELGDIGPPGPPIVVDREGVVISGAPGDPGNPGIPGPPGDEGGSGLPGLPGAPGFPGLERDGMGPGGSPGIPGVKGEMGEPGRATIGLPGSPGRDGLPGLPGAPGLPGSSRPSFLPGAILDGRTGAPGEPGQRGLPGALGPKGFKGEAGDCACDGGVMRPGVKGISGPQGPTGIPGVPGIKGVSGDPGTVGAPGLRGPLASAGQQGLPGLKGEKGDSSYATGRGARGDRGATAPRGPSGIPGTPGRDGLPGLPGPPGPPGDGALGFPGEKGLPGLPGTKGHHGEAGSPGVGYPGPSGVRGPPGDPGLDGLPGQAGLPGPPGITLPCIVPGAYGPPGIPGFPGLPGPKGSKGFPGIPGQPGLHGSKGQPGSPGIIGLQGEPGFPGPRGEQGSQGLPGLDGTDGLPGKMGPSGLAGAKGAPGDVFGAESGAQGERGRPGLPGDKGFAGDIGFPGPKGLDGRPGLLGIKGELGNPGYSGVPGLRGPPGPGGPFGIKGKPGPLGSVGLAGAPGLPGVKGLAGDVGPQGPAGMKGFPGLDGAPGSPGERGFLGPPGPFGHDGRPGFSGPKGEKGSSGLLGFPGMPGLPGVPGVNGFKGAPGAAGGIGSPGVLGLQGQKGDRGDVGPPGLPVLGPPQQALQFKGDKGDPGLAGLGGFPGPRGDKGIPGSRGQPGLPGPAGSASRERGFHGEPGFPGPSGQPGLPGQKGARGIIGFPGMPGERGSDGITGPLGFPGPIGLPGPKGDQGESLGVSGSAGVKGERGDPGFPGERGREGLKGEAGFPGSTGVNGLKGGPGDVGQEGPAGIPGNAGLRGIPGPPGPPGQPGSVGFPGARGTAGPKGFHGFPGLNGLNGLPGTKGSPGTPGLSEVGLKGPAGLPGVKGEEGSPGLGRGALGFPGPKGSSGDMGPPGPVGLPGLPGSPGVSLPSDIRGRPGDAGHPGLDGSSGLPGPPGPRGPPGPASDQGDTGSPGFPGVLGLRGIKGDVGPTGPIGLPGVSGFKGVRGEPGLMGMPGKDGPPGDPGYPGLKGEMGRRGLPGRPGAPGITPQPEEITAPAGLPGLPGIDGVPGFDGDPGFQGPVGKPGTKGLPGRSGLKGHDGLPGSPGTVGDPGPVGTPGPQGFEGVAGKPGSLGLPGMPGRSVGVGYTLVKHSQSDQIPPCPIGMNKLWDGYSLLYVEGQEKSHNQDLGFAGSCLPRFSTMPFIYCNINEVCYYASRNDKSYWLSTTAPIPMMPVDSAQIPQYISRCSVCEAPSQAVAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTVEQSQQFVSAPPSETLKAGQLRTRVSRCQVCMKNL
SIO_010081: COL4A6
subclass of: SO_0000673
so part of: COL4A6
location: complement(join(2750295..2750555,2751111..2751397,2751623..2751814,2752548..2752664,2754116..2754262,2754533..2754631,2756061..2756222,2756955..2757071,2757431..2757556,2758002..2758073,2758498..2758605,2759198..2759305,2759711..2759785,2760285..2760348,2760609..2760790,2761106..2761231,2761473..2761616,2762285..2762455,2764466..2764627,2764891..2765112,2766247..2766354,2766752..2766823,2769370..2769553,2770151..2770330,2771205..2771365,2772268..2772372,2774435..2774584,2775416..2775526,2775847..2775916,2777138..2777191,2778210..2778254,2779004..2779063,2780441..2780494,2781536..2781628,2782479..2782520,2782622..2782657,2783230..2783292,2783716..2783751,2785170..2785238,2787001..2787117,2792575..2792619,2794310..2794444,2837137..2837220,2881199..2881253,2881352..2881365))
location: region:2750295-2881365:-1
so has part: feature:2881352-2881365:-1:exon
so has part: feature:2881199-2881253:-1:exon
so has part: feature:2837137-2837220:-1:exon
so has part: feature:2794310-2794444:-1:exon
so has part: feature:2792575-2792619:-1:exon
so has part: feature:2787001-2787117:-1:exon
so has part: feature:2785170-2785238:-1:exon
so has part: feature:2783716-2783751:-1:exon
so has part: feature:2783230-2783292:-1:exon
so has part: feature:2782622-2782657:-1:exon
so has part: feature:2782479-2782520:-1:exon
so has part: feature:2781536-2781628:-1:exon
so has part: feature:2780441-2780494:-1:exon
so has part: feature:2779004-2779063:-1:exon
so has part: feature:2778210-2778254:-1:exon
so has part: feature:2777138-2777191:-1:exon
so has part: feature:2775847-2775916:-1:exon
so has part: feature:2775416-2775526:-1:exon
so has part: feature:2774435-2774584:-1:exon
so has part: feature:2772268-2772372:-1:exon
so has part: feature:2771205-2771365:-1:exon
so has part: feature:2770151-2770330:-1:exon
so has part: feature:2769370-2769553:-1:exon
so has part: feature:2766752-2766823:-1:exon
so has part: feature:2766247-2766354:-1:exon
so has part: feature:2764891-2765112:-1:exon
so has part: feature:2764466-2764627:-1:exon
so has part: feature:2762285-2762455:-1:exon
so has part: feature:2761473-2761616:-1:exon
so has part: feature:2761106-2761231:-1:exon
so has part: feature:2760609-2760790:-1:exon
so has part: feature:2760285-2760348:-1:exon
so has part: feature:2759711-2759785:-1:exon
so has part: feature:2759198-2759305:-1:exon
so has part: feature:2758498-2758605:-1:exon
so has part: feature:2758002-2758073:-1:exon
so has part: feature:2757431-2757556:-1:exon
so has part: feature:2756955-2757071:-1:exon
so has part: feature:2756061-2756222:-1:exon
so has part: feature:2754533-2754631:-1:exon
so has part: feature:2754116-2754262:-1:exon
so has part: feature:2752548-2752664:-1:exon
so has part: feature:2751623-2751814:-1:exon
so has part: feature:2751111-2751397:-1:exon
so has part: feature:2750295-2750555:-1:exon

XP_032052180.1
type: Protein
SIO_000068: ncbiprotein

position:2750295:-1
position: 2750295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2881365:-1
position: 2881365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2881352-2881365:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2881199-2881253:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2837137-2837220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2794310-2794444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2792575-2792619:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2787001-2787117:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2785170-2785238:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2783716-2783751:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2783230-2783292:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2782622-2782657:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2782479-2782520:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2781536-2781628:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2780441-2780494:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2779004-2779063:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2778210-2778254:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2777138-2777191:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2775847-2775916:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2775416-2775526:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2774435-2774584:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2772268-2772372:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2771205-2771365:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2770151-2770330:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2769370-2769553:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2766752-2766823:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2766247-2766354:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2764891-2765112:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2764466-2764627:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2762285-2762455:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2761473-2761616:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2761106-2761231:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2760609-2760790:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2760285-2760348:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2759711-2759785:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2759198-2759305:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2758498-2758605:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2758002-2758073:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2757431-2757556:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2756955-2757071:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2756061-2756222:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2754533-2754631:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2754116-2754262:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2752548-2752664:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2751623-2751814:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2751111-2751397:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2750295-2750555:-1:exon

COL4A6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: COL4A6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-6(IV) chain isoform X1
translation: MGCAGLLWVLLLLVCLGMEPASGGGKKSYTGPCGGRDCSAGCKCFPEKGARGRPGPIGIQGPIGAPGFTGPEGLPGAKGERGAVGPPGPPGHKGIKGSMGVPGFQGINGIPGHPGQSGPRGLPGLDGCNGTIGSPGVPGTDGFPGIPGLPGRPGPKGLKGEPVFAQGSLKGMKGENGLPGLDGISGPKGFPGPTGSAGPIGLPGLQGPVGPPGPPGPKGNMGLGFQGEKGEKGDVGLPGPPGPPPSTGILEFMGFPKGKQGEKGEPGLQGLPGEKGLPGLPGFGGVGEKGEKGVPGLPGGRGLLGLDGSDGIPGRKGHPGVPGYPGLDGVEGTKGELGDIGPPGPPIVVDREGVVISGAPGDPGNPGIPGPPGDEGGSGLPGLPGAPGFPGLERDGMGPGGSPGIPGVKGEMGEPGRATIGLPGSPGRDGLPGLPGAPGLPGSSRPSFLPGAILDGRTGAPGEPGQRGLPGALGPKGFKGEAGDCACDGGVMRPGVKGISGPQGPTGIPGVPGIKGVSGDPGTVGAPGLRGPLASAGQQGLPGLKGEKGDSSYATGRGARGDRGATAPRGPSGIPGTPGRDGLPGLPGPPGPPGDGALGFPGEKGLPGLPGTKGHHGEAGSPGVGYPGPSGVRGPPGDPGLDGLPGQAGLPGPPGITLPCIVPGAYGPPGIPGFPGLPGPKGSKGFPGIPGQPGLHGSKGQPGSPGIIGLQGEPGFPGPRGEQGSQGLPGLDGTDGLPGKMGPSGLAGAKGAPGDVFGAESGAQGERGRPGLPGDKGFAGDIGFPGPKGLDGRPGLLGIKGELGNPGYSGVPGLRGPPGPGGPFGIKGKPGPLGSVGLAGAPGCQGLPGVKGLAGDVGPQGPAGMKGFPGLDGAPGSPGERGFLGPPGPFGHDGRPGFSGPKGEKGSSGLLGFPGMPGLPGVPGVNGFKGAPGAAGGIGSPGVLGLQGQKGDRGDVGPPGLPVLGPPQQALQFKGDKGDPGLAGLGGFPGPRGDKGIPGSRGQPGLPGPAGSASRERGFHGEPGFPGPSGQPGLPGQKGARGIIGFPGMPGERGSDGITGPLGFPGPIGLPGPKGDQGESLGVSGSAGVKGERGDPGFPGERGREGLKGEAGFPGSTGVNGLKGGPGDVGQEGPAGIPGNAGLRGIPGPPGPPGQPGSVGFPGARGTAGPKGFHGFPGLNGLNGLPGTKGSPGTPGLSEVGLKGPAGLPGVKGEEGSPGLGRGALGFPGPKGSSGDMGPPGPVGLPGLPGSPGVSLPSDIRGRPGDAGHPGLDGSSGLPGPPGPRGPPGPASDQGDTGSPGFPGVLGLRGIKGDVGPTGPIGLPGVSGFKGVRGEPGLMGMPGKDGPPGDPGYPGLKGEMGRRGLPGRPGAPGITPQPEEITAPAGLPGLPGIDGVPGFDGDPGFQGPVGKPGTKGLPGRSGLKGHDGLPGSPGTVGDPGPVGTPGPQGFEGVAGKPGSLGLPGMPGRSVGVGYTLVKHSQSDQIPPCPIGMNKLWDGYSLLYVEGQEKSHNQDLGFAGSCLPRFSTMPFIYCNINEVCYYASRNDKSYWLSTTAPIPMMPVDSAQIPQYISRCSVCEAPSQAVAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTVEQSQQFVSAPPSETLKAGQLRTRVSRCQVCMKNL
SIO_010081: COL4A6
subclass of: SO_0000673
so part of: COL4A6
location: complement(join(2750295..2750555,2751111..2751397,2751623..2751814,2752548..2752664,2754116..2754262,2754533..2754631,2756061..2756222,2756955..2757071,2757431..2757556,2758002..2758073,2758498..2758605,2759198..2759305,2759711..2759785,2760285..2760348,2760609..2760790,2761106..2761231,2761473..2761616,2762285..2762455,2763512..2763520,2764466..2764627,2764891..2765112,2766247..2766354,2766752..2766823,2769370..2769553,2770151..2770330,2771205..2771365,2772268..2772372,2774435..2774584,2775416..2775526,2775847..2775916,2777138..2777191,2778210..2778254,2779004..2779063,2780441..2780494,2781536..2781628,2782479..2782520,2782622..2782657,2783230..2783292,2783716..2783751,2785170..2785238,2787001..2787117,2792575..2792619,2794310..2794444,2837137..2837220,2881199..2881253,2881352..2881365))
location: region:2750295-2881365:-1
so has part: feature:2881352-2881365:-1:exon
so has part: feature:2881199-2881253:-1:exon
so has part: feature:2837137-2837220:-1:exon
so has part: feature:2794310-2794444:-1:exon
so has part: feature:2792575-2792619:-1:exon
so has part: feature:2787001-2787117:-1:exon
so has part: feature:2785170-2785238:-1:exon
so has part: feature:2783716-2783751:-1:exon
so has part: feature:2783230-2783292:-1:exon
so has part: feature:2782622-2782657:-1:exon
so has part: feature:2782479-2782520:-1:exon
so has part: feature:2781536-2781628:-1:exon
so has part: feature:2780441-2780494:-1:exon
so has part: feature:2779004-2779063:-1:exon
so has part: feature:2778210-2778254:-1:exon
so has part: feature:2777138-2777191:-1:exon
so has part: feature:2775847-2775916:-1:exon
so has part: feature:2775416-2775526:-1:exon
so has part: feature:2774435-2774584:-1:exon
so has part: feature:2772268-2772372:-1:exon
so has part: feature:2771205-2771365:-1:exon
so has part: feature:2770151-2770330:-1:exon
so has part: feature:2769370-2769553:-1:exon
so has part: feature:2766752-2766823:-1:exon
so has part: feature:2766247-2766354:-1:exon
so has part: feature:2764891-2765112:-1:exon
so has part: feature:2764466-2764627:-1:exon
so has part: feature:2763512-2763520:-1:exon
so has part: feature:2762285-2762455:-1:exon
so has part: feature:2761473-2761616:-1:exon
so has part: feature:2761106-2761231:-1:exon
so has part: feature:2760609-2760790:-1:exon
so has part: feature:2760285-2760348:-1:exon
so has part: feature:2759711-2759785:-1:exon
so has part: feature:2759198-2759305:-1:exon
so has part: feature:2758498-2758605:-1:exon
so has part: feature:2758002-2758073:-1:exon
so has part: feature:2757431-2757556:-1:exon
so has part: feature:2756955-2757071:-1:exon
so has part: feature:2756061-2756222:-1:exon
so has part: feature:2754533-2754631:-1:exon
so has part: feature:2754116-2754262:-1:exon
so has part: feature:2752548-2752664:-1:exon
so has part: feature:2751623-2751814:-1:exon
so has part: feature:2751111-2751397:-1:exon
so has part: feature:2750295-2750555:-1:exon

XP_032052179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2881352-2881365:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2881199-2881253:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2837137-2837220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2794310-2794444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2792575-2792619:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2787001-2787117:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2785170-2785238:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2783716-2783751:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2783230-2783292:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2782622-2782657:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2782479-2782520:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2781536-2781628:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2780441-2780494:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2779004-2779063:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2778210-2778254:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2777138-2777191:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2775847-2775916:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2775416-2775526:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2774435-2774584:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2772268-2772372:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2771205-2771365:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2770151-2770330:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2769370-2769553:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2766752-2766823:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2766247-2766354:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2764891-2765112:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2764466-2764627:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2763512-2763520:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2762285-2762455:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2761473-2761616:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2761106-2761231:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2760609-2760790:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2760285-2760348:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2759711-2759785:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2759198-2759305:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2758498-2758605:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2758002-2758073:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2757431-2757556:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2756955-2757071:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2756061-2756222:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2754533-2754631:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2754116-2754262:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2752548-2752664:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2751623-2751814:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2751111-2751397:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2750295-2750555:-1:exon

COL4A5
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: COL4A5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2881922..2968104
location: region:2881922-2968104:1
so has part: feature:2881922-2968104:1:exon
subclass of: SO_0000010

116494595
type: Gene
SIO_000068: ncbigene

position:2881922:1
position: 2881922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2968104:1
position: 2968104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2881922-2968104:1:exon

COL4A5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: COL4A5
product: collagen type IV alpha 5 chain, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196538.1
SIO_010081: COL4A5
subclass of: SO_0000673
so part of: COL4A5
location: join(2881922..2882120,2906793..2906852,2916519..2916608,2917827..2917871,2918598..2918642,2918748..2918810,2919555..2919608,2921232..2921258,2922508..2922588,2923600..2923662,2924161..2924196,2924322..2924363,2924472..2924564,2926794..2926847,2926954..2927010,2929072..2929116,2929217..2929270,2929445..2929486,2929968..2930100,2930940..2931113,2932263..2932346,2933588..2933680,2934859..2934929,2935136..2935327,2935778..2935946,2936596..2936688,2936779..2936883,2937486..2937583,2937848..2937998,2938619..2938732,2941613..2941621,2942307..2942474,2943337..2943426,2944427..2944576,2945758..2945856,2946836..2946925,2947698..2947837,2949605..2949731,2951006..2951086,2951623..2951721,2952298..2952348,2953170..2953355,2955194..2955202,2957486..2957494,2958822..2958955,2959345..2959417,2959566..2959637,2960040..2960168,2960432..2960530,2961822..2962034,2962359..2962536,2963085..2963199,2963561..2963733,2965237..2968104)
location: region:2881922-2968104:1
so has part: feature:2881922-2882120:1:exon
so has part: feature:2906793-2906852:1:exon
so has part: feature:2916519-2916608:1:exon
so has part: feature:2917827-2917871:1:exon
so has part: feature:2918598-2918642:1:exon
so has part: feature:2918748-2918810:1:exon
so has part: feature:2919555-2919608:1:exon
so has part: feature:2921232-2921258:1:exon
so has part: feature:2922508-2922588:1:exon
so has part: feature:2923600-2923662:1:exon
so has part: feature:2924161-2924196:1:exon
so has part: feature:2924322-2924363:1:exon
so has part: feature:2924472-2924564:1:exon
so has part: feature:2926794-2926847:1:exon
so has part: feature:2926954-2927010:1:exon
so has part: feature:2929072-2929116:1:exon
so has part: feature:2929217-2929270:1:exon
so has part: feature:2929445-2929486:1:exon
so has part: feature:2929968-2930100:1:exon
so has part: feature:2930940-2931113:1:exon
so has part: feature:2932263-2932346:1:exon
so has part: feature:2933588-2933680:1:exon
so has part: feature:2934859-2934929:1:exon
so has part: feature:2935136-2935327:1:exon
so has part: feature:2935778-2935946:1:exon
so has part: feature:2936596-2936688:1:exon
so has part: feature:2936779-2936883:1:exon
so has part: feature:2937486-2937583:1:exon
so has part: feature:2937848-2937998:1:exon
so has part: feature:2938619-2938732:1:exon
so has part: feature:2941613-2941621:1:exon
so has part: feature:2942307-2942474:1:exon
so has part: feature:2943337-2943426:1:exon
so has part: feature:2944427-2944576:1:exon
so has part: feature:2945758-2945856:1:exon
so has part: feature:2946836-2946925:1:exon
so has part: feature:2947698-2947837:1:exon
so has part: feature:2949605-2949731:1:exon
so has part: feature:2951006-2951086:1:exon
so has part: feature:2951623-2951721:1:exon
so has part: feature:2952298-2952348:1:exon
so has part: feature:2953170-2953355:1:exon
so has part: feature:2955194-2955202:1:exon
so has part: feature:2957486-2957494:1:exon
so has part: feature:2958822-2958955:1:exon
so has part: feature:2959345-2959417:1:exon
so has part: feature:2959566-2959637:1:exon
so has part: feature:2960040-2960168:1:exon
so has part: feature:2960432-2960530:1:exon
so has part: feature:2961822-2962034:1:exon
so has part: feature:2962359-2962536:1:exon
so has part: feature:2963085-2963199:1:exon
so has part: feature:2963561-2963733:1:exon
so has part: feature:2965237-2968104:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2881922-2882120:1:exon

position:2882120:1
position: 2882120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2906793-2906852:1:exon

position:2906793:1
position: 2906793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2906852:1
position: 2906852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2916519-2916608:1:exon

position:2916519:1
position: 2916519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2916608:1
position: 2916608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2917827-2917871:1:exon

position:2917827:1
position: 2917827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2917871:1
position: 2917871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2918598-2918642:1:exon

position:2918598:1
position: 2918598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2918642:1
position: 2918642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2918748-2918810:1:exon

position:2918748:1
position: 2918748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2918810:1
position: 2918810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2919555-2919608:1:exon

position:2919555:1
position: 2919555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2919608:1
position: 2919608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2921232-2921258:1:exon

position:2921232:1
position: 2921232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2921258:1
position: 2921258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2922508-2922588:1:exon

position:2922508:1
position: 2922508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2922588:1
position: 2922588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2923600-2923662:1:exon

position:2923600:1
position: 2923600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2923662:1
position: 2923662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2924161-2924196:1:exon

position:2924161:1
position: 2924161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2924196:1
position: 2924196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2924322-2924363:1:exon

position:2924322:1
position: 2924322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2924363:1
position: 2924363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2924472-2924564:1:exon

position:2924472:1
position: 2924472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2924564:1
position: 2924564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2926794-2926847:1:exon

position:2926794:1
position: 2926794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2926847:1
position: 2926847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2926954-2927010:1:exon

position:2926954:1
position: 2926954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2927010:1
position: 2927010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2929072-2929116:1:exon

position:2929072:1
position: 2929072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2929116:1
position: 2929116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2929217-2929270:1:exon

position:2929217:1
position: 2929217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2929270:1
position: 2929270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2929445-2929486:1:exon

position:2929445:1
position: 2929445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2929486:1
position: 2929486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2929968-2930100:1:exon

position:2929968:1
position: 2929968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2930100:1
position: 2930100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2930940-2931113:1:exon

position:2930940:1
position: 2930940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2931113:1
position: 2931113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2932263-2932346:1:exon

position:2932263:1
position: 2932263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2932346:1
position: 2932346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2933588-2933680:1:exon

position:2933588:1
position: 2933588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2933680:1
position: 2933680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2934859-2934929:1:exon

position:2934859:1
position: 2934859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2934929:1
position: 2934929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2935136-2935327:1:exon

position:2935136:1
position: 2935136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2935327:1
position: 2935327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2935778-2935946:1:exon

position:2935778:1
position: 2935778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2935946:1
position: 2935946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2936596-2936688:1:exon

position:2936596:1
position: 2936596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2936688:1
position: 2936688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2936779-2936883:1:exon

position:2936779:1
position: 2936779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2936883:1
position: 2936883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2937486-2937583:1:exon

position:2937486:1
position: 2937486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2937583:1
position: 2937583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2937848-2937998:1:exon

position:2937848:1
position: 2937848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2937998:1
position: 2937998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2938619-2938732:1:exon

position:2938619:1
position: 2938619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2938732:1
position: 2938732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2941613-2941621:1:exon

position:2941613:1
position: 2941613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2941621:1
position: 2941621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2942307-2942474:1:exon

position:2942307:1
position: 2942307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2942474:1
position: 2942474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2943337-2943426:1:exon

position:2943337:1
position: 2943337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2943426:1
position: 2943426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:2944427-2944576:1:exon

position:2944427:1
position: 2944427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2944576:1
position: 2944576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:2945758-2945856:1:exon

position:2945758:1
position: 2945758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2945856:1
position: 2945856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:2946836-2946925:1:exon

position:2946836:1
position: 2946836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2946925:1
position: 2946925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:2947698-2947837:1:exon

position:2947698:1
position: 2947698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2947837:1
position: 2947837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:2949605-2949731:1:exon

position:2949605:1
position: 2949605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2949731:1
position: 2949731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:2951006-2951086:1:exon

position:2951006:1
position: 2951006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2951086:1
position: 2951086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:2951623-2951721:1:exon

position:2951623:1
position: 2951623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2951721:1
position: 2951721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:2952298-2952348:1:exon

position:2952298:1
position: 2952298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2952348:1
position: 2952348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:2953170-2953355:1:exon

position:2953170:1
position: 2953170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2953355:1
position: 2953355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:2955194-2955202:1:exon

position:2955194:1
position: 2955194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2955202:1
position: 2955202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:2957486-2957494:1:exon

position:2957486:1
position: 2957486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2957494:1
position: 2957494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:2958822-2958955:1:exon

position:2958822:1
position: 2958822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2958955:1
position: 2958955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:2959345-2959417:1:exon

position:2959345:1
position: 2959345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2959417:1
position: 2959417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:2959566-2959637:1:exon

position:2959566:1
position: 2959566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2959637:1
position: 2959637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:2960040-2960168:1:exon

position:2960040:1
position: 2960040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2960168:1
position: 2960168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:2960432-2960530:1:exon

position:2960432:1
position: 2960432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2960530:1
position: 2960530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:2961822-2962034:1:exon

position:2961822:1
position: 2961822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2962034:1
position: 2962034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:2962359-2962536:1:exon

position:2962359:1
position: 2962359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2962536:1
position: 2962536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:2963085-2963199:1:exon

position:2963085:1
position: 2963085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2963199:1
position: 2963199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:2963561-2963733:1:exon

position:2963561:1
position: 2963561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2963733:1
position: 2963733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:2965237-2968104:1:exon

position:2965237:1
position: 2965237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COL4A5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: COL4A5
product: collagen type IV alpha 5 chain, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196540.1
SIO_010081: COL4A5
subclass of: SO_0000673
so part of: COL4A5
location: join(2881922..2882120,2906793..2906852,2916519..2916608,2917827..2917871,2918598..2918642,2918748..2918810,2919555..2919608,2921232..2921258,2922508..2922588,2923600..2923662,2924161..2924196,2924322..2924363,2924472..2924564,2926794..2926847,2926954..2927010,2929072..2929116,2929217..2929270,2929445..2929486,2929968..2930100,2930940..2931113,2932263..2932346,2933588..2933680,2934859..2934929,2935136..2935327,2935778..2935946,2936596..2936688,2936779..2936883,2937486..2937583,2937848..2937998,2938619..2938732,2941613..2941621,2942307..2942474,2943337..2943426,2944427..2944576,2945758..2945856,2946836..2946925,2947698..2947837,2949605..2949731,2951006..2951086,2951623..2951721,2952298..2952348,2953170..2953355,2957486..2957494,2958822..2958955,2959345..2959417,2959566..2959637,2960040..2960168,2960432..2960530,2961822..2962034,2962359..2962536,2963085..2963199,2963561..2963733,2965237..2968104)
location: region:2881922-2968104:1
so has part: feature:2881922-2882120:1:exon
so has part: feature:2906793-2906852:1:exon
so has part: feature:2916519-2916608:1:exon
so has part: feature:2917827-2917871:1:exon
so has part: feature:2918598-2918642:1:exon
so has part: feature:2918748-2918810:1:exon
so has part: feature:2919555-2919608:1:exon
so has part: feature:2921232-2921258:1:exon
so has part: feature:2922508-2922588:1:exon
so has part: feature:2923600-2923662:1:exon
so has part: feature:2924161-2924196:1:exon
so has part: feature:2924322-2924363:1:exon
so has part: feature:2924472-2924564:1:exon
so has part: feature:2926794-2926847:1:exon
so has part: feature:2926954-2927010:1:exon
so has part: feature:2929072-2929116:1:exon
so has part: feature:2929217-2929270:1:exon
so has part: feature:2929445-2929486:1:exon
so has part: feature:2929968-2930100:1:exon
so has part: feature:2930940-2931113:1:exon
so has part: feature:2932263-2932346:1:exon
so has part: feature:2933588-2933680:1:exon
so has part: feature:2934859-2934929:1:exon
so has part: feature:2935136-2935327:1:exon
so has part: feature:2935778-2935946:1:exon
so has part: feature:2936596-2936688:1:exon
so has part: feature:2936779-2936883:1:exon
so has part: feature:2937486-2937583:1:exon
so has part: feature:2937848-2937998:1:exon
so has part: feature:2938619-2938732:1:exon
so has part: feature:2941613-2941621:1:exon
so has part: feature:2942307-2942474:1:exon
so has part: feature:2943337-2943426:1:exon
so has part: feature:2944427-2944576:1:exon
so has part: feature:2945758-2945856:1:exon
so has part: feature:2946836-2946925:1:exon
so has part: feature:2947698-2947837:1:exon
so has part: feature:2949605-2949731:1:exon
so has part: feature:2951006-2951086:1:exon
so has part: feature:2951623-2951721:1:exon
so has part: feature:2952298-2952348:1:exon
so has part: feature:2953170-2953355:1:exon
so has part: feature:2957486-2957494:1:exon
so has part: feature:2958822-2958955:1:exon
so has part: feature:2959345-2959417:1:exon
so has part: feature:2959566-2959637:1:exon
so has part: feature:2960040-2960168:1:exon
so has part: feature:2960432-2960530:1:exon
so has part: feature:2961822-2962034:1:exon
so has part: feature:2962359-2962536:1:exon
so has part: feature:2963085-2963199:1:exon
so has part: feature:2963561-2963733:1:exon
so has part: feature:2965237-2968104:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2881922-2882120:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2906793-2906852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2916519-2916608:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2917827-2917871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2918598-2918642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2918748-2918810:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2919555-2919608:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2921232-2921258:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2922508-2922588:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2923600-2923662:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2924161-2924196:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2924322-2924363:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2924472-2924564:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2926794-2926847:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2926954-2927010:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2929072-2929116:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2929217-2929270:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2929445-2929486:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2929968-2930100:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2930940-2931113:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2932263-2932346:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2933588-2933680:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2934859-2934929:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2935136-2935327:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2935778-2935946:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2936596-2936688:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2936779-2936883:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2937486-2937583:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2937848-2937998:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2938619-2938732:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2941613-2941621:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2942307-2942474:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2943337-2943426:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2944427-2944576:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2945758-2945856:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2946836-2946925:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2947698-2947837:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2949605-2949731:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2951006-2951086:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2951623-2951721:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2952298-2952348:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2953170-2953355:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2957486-2957494:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2958822-2958955:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2959345-2959417:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2959566-2959637:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2960040-2960168:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2960432-2960530:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2961822-2962034:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2962359-2962536:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2963085-2963199:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:2963561-2963733:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:2965237-2968104:1:exon

COL4A5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: COL4A5
product: collagen type IV alpha 5 chain, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196541.1
SIO_010081: COL4A5
subclass of: SO_0000673
so part of: COL4A5
location: join(2881922..2882120,2906793..2906852,2916519..2916608,2917827..2917871,2918598..2918642,2918748..2918810,2919555..2919608,2921232..2921258,2922508..2922588,2923600..2923662,2924161..2924196,2924322..2924363,2924472..2924564,2926794..2926847,2926954..2927010,2929072..2929116,2929217..2929270,2929445..2929486,2929968..2930100,2930940..2931113,2932263..2932346,2933588..2933680,2934859..2934929,2935136..2935327,2935778..2935946,2936596..2936688,2936779..2936883,2937486..2937583,2937848..2937998,2938619..2938732,2941613..2941621,2942307..2942474,2943337..2943426,2944427..2944576,2945758..2945856,2946836..2946925,2947698..2947837,2949605..2949731,2951006..2951086,2951623..2951721,2952298..2952348,2953170..2953355,2958822..2958955,2959345..2959417,2959566..2959637,2960040..2960168,2960432..2960530,2961822..2962034,2962359..2962536,2963085..2963199,2963561..2963733,2965237..2968104)
location: region:2881922-2968104:1
so has part: feature:2881922-2882120:1:exon
so has part: feature:2906793-2906852:1:exon
so has part: feature:2916519-2916608:1:exon
so has part: feature:2917827-2917871:1:exon
so has part: feature:2918598-2918642:1:exon
so has part: feature:2918748-2918810:1:exon
so has part: feature:2919555-2919608:1:exon
so has part: feature:2921232-2921258:1:exon
so has part: feature:2922508-2922588:1:exon
so has part: feature:2923600-2923662:1:exon
so has part: feature:2924161-2924196:1:exon
so has part: feature:2924322-2924363:1:exon
so has part: feature:2924472-2924564:1:exon
so has part: feature:2926794-2926847:1:exon
so has part: feature:2926954-2927010:1:exon
so has part: feature:2929072-2929116:1:exon
so has part: feature:2929217-2929270:1:exon
so has part: feature:2929445-2929486:1:exon
so has part: feature:2929968-2930100:1:exon
so has part: feature:2930940-2931113:1:exon
so has part: feature:2932263-2932346:1:exon
so has part: feature:2933588-2933680:1:exon
so has part: feature:2934859-2934929:1:exon
so has part: feature:2935136-2935327:1:exon
so has part: feature:2935778-2935946:1:exon
so has part: feature:2936596-2936688:1:exon
so has part: feature:2936779-2936883:1:exon
so has part: feature:2937486-2937583:1:exon
so has part: feature:2937848-2937998:1:exon
so has part: feature:2938619-2938732:1:exon
so has part: feature:2941613-2941621:1:exon
so has part: feature:2942307-2942474:1:exon
so has part: feature:2943337-2943426:1:exon
so has part: feature:2944427-2944576:1:exon
so has part: feature:2945758-2945856:1:exon
so has part: feature:2946836-2946925:1:exon
so has part: feature:2947698-2947837:1:exon
so has part: feature:2949605-2949731:1:exon
so has part: feature:2951006-2951086:1:exon
so has part: feature:2951623-2951721:1:exon
so has part: feature:2952298-2952348:1:exon
so has part: feature:2953170-2953355:1:exon
so has part: feature:2958822-2958955:1:exon
so has part: feature:2959345-2959417:1:exon
so has part: feature:2959566-2959637:1:exon
so has part: feature:2960040-2960168:1:exon
so has part: feature:2960432-2960530:1:exon
so has part: feature:2961822-2962034:1:exon
so has part: feature:2962359-2962536:1:exon
so has part: feature:2963085-2963199:1:exon
so has part: feature:2963561-2963733:1:exon
so has part: feature:2965237-2968104:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2881922-2882120:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2906793-2906852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2916519-2916608:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2917827-2917871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2918598-2918642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2918748-2918810:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2919555-2919608:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2921232-2921258:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2922508-2922588:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2923600-2923662:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2924161-2924196:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2924322-2924363:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2924472-2924564:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2926794-2926847:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2926954-2927010:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2929072-2929116:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2929217-2929270:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2929445-2929486:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2929968-2930100:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2930940-2931113:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2932263-2932346:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2933588-2933680:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2934859-2934929:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2935136-2935327:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2935778-2935946:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2936596-2936688:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2936779-2936883:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2937486-2937583:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2937848-2937998:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2938619-2938732:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2941613-2941621:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2942307-2942474:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2943337-2943426:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2944427-2944576:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2945758-2945856:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2946836-2946925:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2947698-2947837:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2949605-2949731:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2951006-2951086:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2951623-2951721:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2952298-2952348:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2953170-2953355:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2958822-2958955:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2959345-2959417:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2959566-2959637:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2960040-2960168:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2960432-2960530:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2961822-2962034:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2962359-2962536:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2963085-2963199:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2963561-2963733:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:2965237-2968104:1:exon

COL4A5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: COL4A5
product: collagen type IV alpha 5 chain, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196539.1
SIO_010081: COL4A5
subclass of: SO_0000673
so part of: COL4A5
location: join(2881922..2882120,2906793..2906852,2916519..2916608,2917827..2917871,2918598..2918642,2918748..2918810,2919555..2919608,2921232..2921258,2922508..2922588,2923600..2923662,2924161..2924196,2924322..2924363,2924472..2924564,2926794..2926847,2926954..2927010,2929072..2929116,2929217..2929270,2929445..2929486,2929968..2930100,2930940..2931113,2932263..2932346,2933588..2933680,2934859..2934929,2935136..2935327,2935778..2935946,2936596..2936688,2936779..2936883,2937486..2937583,2937848..2937998,2938619..2938732,2942307..2942474,2943337..2943426,2944427..2944576,2945758..2945856,2946836..2946925,2947698..2947837,2949605..2949731,2951006..2951086,2951623..2951721,2952298..2952348,2953170..2953355,2955194..2955202,2957486..2957494,2958822..2958955,2959345..2959417,2959566..2959637,2960040..2960168,2960432..2960530,2961822..2962034,2962359..2962536,2963085..2963199,2963561..2963733,2965237..2968104)
location: region:2881922-2968104:1
so has part: feature:2881922-2882120:1:exon
so has part: feature:2906793-2906852:1:exon
so has part: feature:2916519-2916608:1:exon
so has part: feature:2917827-2917871:1:exon
so has part: feature:2918598-2918642:1:exon
so has part: feature:2918748-2918810:1:exon
so has part: feature:2919555-2919608:1:exon
so has part: feature:2921232-2921258:1:exon
so has part: feature:2922508-2922588:1:exon
so has part: feature:2923600-2923662:1:exon
so has part: feature:2924161-2924196:1:exon
so has part: feature:2924322-2924363:1:exon
so has part: feature:2924472-2924564:1:exon
so has part: feature:2926794-2926847:1:exon
so has part: feature:2926954-2927010:1:exon
so has part: feature:2929072-2929116:1:exon
so has part: feature:2929217-2929270:1:exon
so has part: feature:2929445-2929486:1:exon
so has part: feature:2929968-2930100:1:exon
so has part: feature:2930940-2931113:1:exon
so has part: feature:2932263-2932346:1:exon
so has part: feature:2933588-2933680:1:exon
so has part: feature:2934859-2934929:1:exon
so has part: feature:2935136-2935327:1:exon
so has part: feature:2935778-2935946:1:exon
so has part: feature:2936596-2936688:1:exon
so has part: feature:2936779-2936883:1:exon
so has part: feature:2937486-2937583:1:exon
so has part: feature:2937848-2937998:1:exon
so has part: feature:2938619-2938732:1:exon
so has part: feature:2942307-2942474:1:exon
so has part: feature:2943337-2943426:1:exon
so has part: feature:2944427-2944576:1:exon
so has part: feature:2945758-2945856:1:exon
so has part: feature:2946836-2946925:1:exon
so has part: feature:2947698-2947837:1:exon
so has part: feature:2949605-2949731:1:exon
so has part: feature:2951006-2951086:1:exon
so has part: feature:2951623-2951721:1:exon
so has part: feature:2952298-2952348:1:exon
so has part: feature:2953170-2953355:1:exon
so has part: feature:2955194-2955202:1:exon
so has part: feature:2957486-2957494:1:exon
so has part: feature:2958822-2958955:1:exon
so has part: feature:2959345-2959417:1:exon
so has part: feature:2959566-2959637:1:exon
so has part: feature:2960040-2960168:1:exon
so has part: feature:2960432-2960530:1:exon
so has part: feature:2961822-2962034:1:exon
so has part: feature:2962359-2962536:1:exon
so has part: feature:2963085-2963199:1:exon
so has part: feature:2963561-2963733:1:exon
so has part: feature:2965237-2968104:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2881922-2882120:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2906793-2906852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2916519-2916608:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2917827-2917871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2918598-2918642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2918748-2918810:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2919555-2919608:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2921232-2921258:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2922508-2922588:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2923600-2923662:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2924161-2924196:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2924322-2924363:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2924472-2924564:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2926794-2926847:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2926954-2927010:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2929072-2929116:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2929217-2929270:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2929445-2929486:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2929968-2930100:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2930940-2931113:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2932263-2932346:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2933588-2933680:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2934859-2934929:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2935136-2935327:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2935778-2935946:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2936596-2936688:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2936779-2936883:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2937486-2937583:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2937848-2937998:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2938619-2938732:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2942307-2942474:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2943337-2943426:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2944427-2944576:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2945758-2945856:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2946836-2946925:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2947698-2947837:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2949605-2949731:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2951006-2951086:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2951623-2951721:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2952298-2952348:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2953170-2953355:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2955194-2955202:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2957486-2957494:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2958822-2958955:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2959345-2959417:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2959566-2959637:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2960040-2960168:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2960432-2960530:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2961822-2962034:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2962359-2962536:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2963085-2963199:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:2963561-2963733:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:2965237-2968104:1:exon

COL4A5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: COL4A5
product: collagen type IV alpha 5 chain, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196542.1
SIO_010081: COL4A5
subclass of: SO_0000673
so part of: COL4A5
location: join(2881922..2882120,2906793..2906852,2916519..2916608,2917827..2917871,2918598..2918642,2918748..2918810,2919555..2919608,2921232..2921258,2922508..2922588,2923600..2923662,2924161..2924196,2924322..2924363,2924472..2924564,2926794..2926847,2926954..2927010,2929072..2929116,2929217..2929270,2929445..2929486,2929968..2930100,2930940..2931113,2932263..2932346,2933588..2933680,2934859..2934929,2935136..2935327,2935778..2935946,2936596..2936688,2936779..2936883,2937486..2937583,2937848..2937998,2938619..2938732,2942307..2942474,2943337..2943426,2944427..2944576,2945758..2945856,2946836..2946925,2947698..2947837,2949605..2949731,2951006..2951086,2951623..2951721,2952298..2952348,2953170..2953355,2958822..2958955,2959345..2959417,2959566..2959637,2960040..2960168,2960432..2960530,2961822..2962034,2962359..2962536,2963085..2963199,2963561..2963733,2965237..2968104)
location: region:2881922-2968104:1
so has part: feature:2881922-2882120:1:exon
so has part: feature:2906793-2906852:1:exon
so has part: feature:2916519-2916608:1:exon
so has part: feature:2917827-2917871:1:exon
so has part: feature:2918598-2918642:1:exon
so has part: feature:2918748-2918810:1:exon
so has part: feature:2919555-2919608:1:exon
so has part: feature:2921232-2921258:1:exon
so has part: feature:2922508-2922588:1:exon
so has part: feature:2923600-2923662:1:exon
so has part: feature:2924161-2924196:1:exon
so has part: feature:2924322-2924363:1:exon
so has part: feature:2924472-2924564:1:exon
so has part: feature:2926794-2926847:1:exon
so has part: feature:2926954-2927010:1:exon
so has part: feature:2929072-2929116:1:exon
so has part: feature:2929217-2929270:1:exon
so has part: feature:2929445-2929486:1:exon
so has part: feature:2929968-2930100:1:exon
so has part: feature:2930940-2931113:1:exon
so has part: feature:2932263-2932346:1:exon
so has part: feature:2933588-2933680:1:exon
so has part: feature:2934859-2934929:1:exon
so has part: feature:2935136-2935327:1:exon
so has part: feature:2935778-2935946:1:exon
so has part: feature:2936596-2936688:1:exon
so has part: feature:2936779-2936883:1:exon
so has part: feature:2937486-2937583:1:exon
so has part: feature:2937848-2937998:1:exon
so has part: feature:2938619-2938732:1:exon
so has part: feature:2942307-2942474:1:exon
so has part: feature:2943337-2943426:1:exon
so has part: feature:2944427-2944576:1:exon
so has part: feature:2945758-2945856:1:exon
so has part: feature:2946836-2946925:1:exon
so has part: feature:2947698-2947837:1:exon
so has part: feature:2949605-2949731:1:exon
so has part: feature:2951006-2951086:1:exon
so has part: feature:2951623-2951721:1:exon
so has part: feature:2952298-2952348:1:exon
so has part: feature:2953170-2953355:1:exon
so has part: feature:2958822-2958955:1:exon
so has part: feature:2959345-2959417:1:exon
so has part: feature:2959566-2959637:1:exon
so has part: feature:2960040-2960168:1:exon
so has part: feature:2960432-2960530:1:exon
so has part: feature:2961822-2962034:1:exon
so has part: feature:2962359-2962536:1:exon
so has part: feature:2963085-2963199:1:exon
so has part: feature:2963561-2963733:1:exon
so has part: feature:2965237-2968104:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2881922-2882120:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2906793-2906852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2916519-2916608:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2917827-2917871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2918598-2918642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2918748-2918810:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2919555-2919608:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2921232-2921258:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2922508-2922588:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2923600-2923662:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2924161-2924196:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2924322-2924363:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2924472-2924564:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2926794-2926847:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2926954-2927010:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2929072-2929116:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2929217-2929270:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2929445-2929486:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2929968-2930100:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2930940-2931113:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2932263-2932346:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2933588-2933680:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2934859-2934929:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2935136-2935327:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2935778-2935946:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2936596-2936688:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2936779-2936883:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2937486-2937583:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2937848-2937998:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2938619-2938732:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2942307-2942474:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2943337-2943426:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2944427-2944576:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2945758-2945856:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2946836-2946925:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2947698-2947837:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2949605-2949731:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2951006-2951086:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2951623-2951721:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2952298-2952348:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2953170-2953355:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2958822-2958955:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2959345-2959417:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2959566-2959637:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2960040-2960168:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2960432-2960530:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2961822-2962034:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2962359-2962536:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2963085-2963199:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2963561-2963733:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2965237-2968104:1:exon

COL4A5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: COL4A5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-5(IV) chain isoform X1
translation: MEPRWWSRSPAAGCLVVLLLGCWRLDEAAAAACHGCTSVSKCDCSGVKGEKGERGFPGLEGQPGLPGFPGPEGPPGPRGPKGDDGLPGPIGPKGIRGPPGLPGFPGTPGLPGLPGQDGPPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGLPGMKGEAGEIITSLLPGQKGDPGFPGLPGIPGPPGSTGIPGPVGPPGPPGLTGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQIGEQKRPNDIEFQKGDQGIPGDPGPPGLPGPQGPPGLPGGVKGEKGEQGEPGKRGKPGKDGEPGQPGRDGLPGGPGVNGAPGRDGEKGEKGDTGPPGPPGSVISRPGIDATVGPKGSKGLPGLPGAKGERGFSGRPGPPGLPGSPGVTTVGPPGPPGLPGERGQKGDPGLPGVSIPGQPGLDGPRGPPGPPGPPGPPAPSVPPGEGLCEQGPPGPPGIPGQQGFTGERGQKGDQGDTCFNCIGTGISGPPGERGPPGPPGSPGSPGFPGPKGEKGLPGLTGLVGPPGFPGPPGAPGRPGPKGDPGDVLTSPKMKGEKGDPGFPGPPGLPGIDGTPGRDGLPGLPGPKGEPGSVAFKGEMGIPGDPGIPGLPGDKGLPGPPGFGPQGSPGEKGIQGVSGRPGPPGVPGPKGEPGQTITEPGVPGPPGPPGRNGDPGLPGDPGQPGQRGLSGIPGAKGEPGIPGIGLPGPPGPKGFPGTPGPPGAPGTPGRPGLDGPPGPPGFPGQKGDRGFGVPGPTGPPGPPGIKGVQGPKGDPGFPGNPGLPGRAGFDGTPGPKGDPGPSGPPGLPGPPGIPGIGGQGPPGPPGPPGPVGPPGSPGLQGVPGEKGDPGPPGFDVPGPPGDQGTPGYPGPPGLPGPQGSPGPPGRDGIPGFPGAKGEMGVMGAPGPPGPPGTPGRNGLPGSKGNNGLPGPPGPPGPVGQKGIKGEAGLPGPPGKIDPKQLGAKGEKGEPGVPGIPGLSGQKGYQGLQGDPGPPGLSGPPGAPGLPGIKGDTGLPGQPGPTGPPGLKGAMGEMGLPGPPGIKGSQGIAGRPGQPGPAGFPGLKGEKGDPGLSSIGIPGLPGPKGDLGLPGYPGSPGSKGVAGNPGLPGLPGNPGAKGEPGLPGFPGTPGIPGPKGIEGPPGNPGLPGPPGPVGDIGRPGPPGPPGEKGQPGRDGIPGPAGQKGEPGLPGFGRPGPPGLPGLSGQKGELGLPGPPGPPGLPGLKGEPGFQGFPGLQGPPGPPGLPGPPLEGPKGSPGPPGVPGRPGPSGPPGSPGPEGPRGPPGSGGLKGEKGNPGQPGPPGLTGQKGDQGPPGRQGDPGRPGLNGMKGDPGVPGVPGFPGMKGPTGPAGPAGLTGSQGLPGPPGPPGLPGTIGRSIVVKGDPGPPGPPGQPGSKGPPGLPGPQGLPGPIGAPGDPGRDGLPGFDGPAGRKGERGLPGQPGSRGIQGPPGPDGLQGPPGPPGTASVAHGFLITRHSQTRDTPLCPQGTSRIYDGFSLLYVQGNERAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPLTGKSIQPFISRCVVCEAPAMVIAVHSQTIQIPSCPPGWDSLWIGYSFMMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVEVSEMFSKPQSETLKAGDLRTRISRCQVCMKKT
SIO_010081: COL4A5
subclass of: SO_0000673
so part of: COL4A5
location: join(2882028..2882120,2906793..2906852,2916519..2916608,2917827..2917871,2918598..2918642,2918748..2918810,2919555..2919608,2921232..2921258,2922508..2922588,2923600..2923662,2924161..2924196,2924322..2924363,2924472..2924564,2926794..2926847,2926954..2927010,2929072..2929116,2929217..2929270,2929445..2929486,2929968..2930100,2930940..2931113,2932263..2932346,2933588..2933680,2934859..2934929,2935136..2935327,2935778..2935946,2936596..2936688,2936779..2936883,2937486..2937583,2937848..2937998,2938619..2938732,2941613..2941621,2942307..2942474,2943337..2943426,2944427..2944576,2945758..2945856,2946836..2946925,2947698..2947837,2949605..2949731,2951006..2951086,2951623..2951721,2952298..2952348,2953170..2953355,2955194..2955202,2957486..2957494,2958822..2958955,2959345..2959417,2959566..2959637,2960040..2960168,2960432..2960530,2961822..2962034,2962359..2962536,2963085..2963199,2963561..2963733,2965237..2965318)
location: region:2882028-2965318:1
so has part: feature:2882028-2882120:1:exon
so has part: feature:2906793-2906852:1:exon
so has part: feature:2916519-2916608:1:exon
so has part: feature:2917827-2917871:1:exon
so has part: feature:2918598-2918642:1:exon
so has part: feature:2918748-2918810:1:exon
so has part: feature:2919555-2919608:1:exon
so has part: feature:2921232-2921258:1:exon
so has part: feature:2922508-2922588:1:exon
so has part: feature:2923600-2923662:1:exon
so has part: feature:2924161-2924196:1:exon
so has part: feature:2924322-2924363:1:exon
so has part: feature:2924472-2924564:1:exon
so has part: feature:2926794-2926847:1:exon
so has part: feature:2926954-2927010:1:exon
so has part: feature:2929072-2929116:1:exon
so has part: feature:2929217-2929270:1:exon
so has part: feature:2929445-2929486:1:exon
so has part: feature:2929968-2930100:1:exon
so has part: feature:2930940-2931113:1:exon
so has part: feature:2932263-2932346:1:exon
so has part: feature:2933588-2933680:1:exon
so has part: feature:2934859-2934929:1:exon
so has part: feature:2935136-2935327:1:exon
so has part: feature:2935778-2935946:1:exon
so has part: feature:2936596-2936688:1:exon
so has part: feature:2936779-2936883:1:exon
so has part: feature:2937486-2937583:1:exon
so has part: feature:2937848-2937998:1:exon
so has part: feature:2938619-2938732:1:exon
so has part: feature:2941613-2941621:1:exon
so has part: feature:2942307-2942474:1:exon
so has part: feature:2943337-2943426:1:exon
so has part: feature:2944427-2944576:1:exon
so has part: feature:2945758-2945856:1:exon
so has part: feature:2946836-2946925:1:exon
so has part: feature:2947698-2947837:1:exon
so has part: feature:2949605-2949731:1:exon
so has part: feature:2951006-2951086:1:exon
so has part: feature:2951623-2951721:1:exon
so has part: feature:2952298-2952348:1:exon
so has part: feature:2953170-2953355:1:exon
so has part: feature:2955194-2955202:1:exon
so has part: feature:2957486-2957494:1:exon
so has part: feature:2958822-2958955:1:exon
so has part: feature:2959345-2959417:1:exon
so has part: feature:2959566-2959637:1:exon
so has part: feature:2960040-2960168:1:exon
so has part: feature:2960432-2960530:1:exon
so has part: feature:2961822-2962034:1:exon
so has part: feature:2962359-2962536:1:exon
so has part: feature:2963085-2963199:1:exon
so has part: feature:2963561-2963733:1:exon
so has part: feature:2965237-2965318:1:exon

XP_032052429.1
type: Protein
SIO_000068: ncbiprotein

position:2882028:1
position: 2882028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2965318:1
position: 2965318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2882028-2882120:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2906793-2906852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2916519-2916608:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2917827-2917871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2918598-2918642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2918748-2918810:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2919555-2919608:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2921232-2921258:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2922508-2922588:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2923600-2923662:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2924161-2924196:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2924322-2924363:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2924472-2924564:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2926794-2926847:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2926954-2927010:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2929072-2929116:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2929217-2929270:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2929445-2929486:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2929968-2930100:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2930940-2931113:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2932263-2932346:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2933588-2933680:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2934859-2934929:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2935136-2935327:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2935778-2935946:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2936596-2936688:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2936779-2936883:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2937486-2937583:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2937848-2937998:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2938619-2938732:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2941613-2941621:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2942307-2942474:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2943337-2943426:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2944427-2944576:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2945758-2945856:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2946836-2946925:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2947698-2947837:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2949605-2949731:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2951006-2951086:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2951623-2951721:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2952298-2952348:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2953170-2953355:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2955194-2955202:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2957486-2957494:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2958822-2958955:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2959345-2959417:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2959566-2959637:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2960040-2960168:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2960432-2960530:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2961822-2962034:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2962359-2962536:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:2963085-2963199:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:2963561-2963733:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:2965237-2965318:1:exon

COL4A5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: COL4A5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-5(IV) chain isoform X3
translation: MEPRWWSRSPAAGCLVVLLLGCWRLDEAAAAACHGCTSVSKCDCSGVKGEKGERGFPGLEGQPGLPGFPGPEGPPGPRGPKGDDGLPGPIGPKGIRGPPGLPGFPGTPGLPGLPGQDGPPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGLPGMKGEAGEIITSLLPGQKGDPGFPGLPGIPGPPGSTGIPGPVGPPGPPGLTGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQIGEQKRPNDIEFQKGDQGIPGDPGPPGLPGPQGPPGLPGGVKGEKGEQGEPGKRGKPGKDGEPGQPGRDGLPGGPGVNGAPGRDGEKGEKGDTGPPGPPGSVISRPGIDATVGPKGSKGLPGLPGAKGERGFSGRPGPPGLPGSPGVTTVGPPGPPGLPGERGQKGDPGLPGVSIPGQPGLDGPRGPPGPPGPPGPPAPSVPPGEGLCEQGPPGPPGIPGQQGFTGERGQKGDQGDTCFNCIGTGISGPPGERGPPGPPGSPGSPGFPGPKGEKGLPGLTGLVGPPGFPGPPGAPGRPGPKGDPGDVLTSPKMKGEKGDPGFPGPPGLPGIDGTPGRDGLPGLPGPKGEPGSVAFKGEMGIPGDPGIPGLPGDKGLPGPPGFGPQGSPGEKGIQGVSGRPGPPGVPGPKGEPGQTITEPGVPGPPGPPGRNGDPGLPGDPGQPGQRGLSGIPGAKGEPGIPGIGLPGPPGPKGFPGTPGPPGAPGTPGRPGLDGPPGPPGFPGQKGDRGFGVPGPTGPPGPPGIKGVQGPKGDPGFPGNPGLPGRAGFDGTPGPKGDPGPSGPPGLPGPPGIPGIGGQGPPGPPGPPGPVGPPGSPGLQGVPGEKGDPGPPGFDVPGPPGDQGTPGYPGPPGLPGPQGSPGPPGRDGIPGFPGAKGEMGVMGAPGPPGPPGTPGRNGLPGSKGNNGLPGPPGPPGPVGQKGIKGEAGLPGPPGKIDPKQLGAKGEKGEPGVPGIPGLSGQKGYQGLQGDPGPPGLSGPPGAPGLPGIKGDTGLPGQPGPTGPPGLKGAMGEMGLPGPPGIKGSQGIAGRPGQPGPAGFPGLKGEKGDPGLSSIGIPGLPGPKGDLGLPGYPGSPGSKGVAGNPGLPGLPGNPGAKGEPGLPGFPGTPGIPGPKGIEGPPGNPGLPGPPGPVGDIGRPGPPGPPGEKGQPGRDGIPGPAGQKGEPGLPGFGRPGPPGLPGLSGQKGELGLPGPPGPPGLPGLKGEPGFQGFPGLQGPPGPPGLPGPPLEGPKGSPGPPGVPGRPGPPGSPGPEGPRGPPGSGGLKGEKGNPGQPGPPGLTGQKGDQGPPGRQGDPGRPGLNGMKGDPGVPGVPGFPGMKGPTGPAGPAGLTGSQGLPGPPGPPGLPGTIGRSIVVKGDPGPPGPPGQPGSKGPPGLPGPQGLPGPIGAPGDPGRDGLPGFDGPAGRKGERGLPGQPGSRGIQGPPGPDGLQGPPGPPGTASVAHGFLITRHSQTRDTPLCPQGTSRIYDGFSLLYVQGNERAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPLTGKSIQPFISRCVVCEAPAMVIAVHSQTIQIPSCPPGWDSLWIGYSFMMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVEVSEMFSKPQSETLKAGDLRTRISRCQVCMKKT
SIO_010081: COL4A5
subclass of: SO_0000673
so part of: COL4A5
location: join(2882028..2882120,2906793..2906852,2916519..2916608,2917827..2917871,2918598..2918642,2918748..2918810,2919555..2919608,2921232..2921258,2922508..2922588,2923600..2923662,2924161..2924196,2924322..2924363,2924472..2924564,2926794..2926847,2926954..2927010,2929072..2929116,2929217..2929270,2929445..2929486,2929968..2930100,2930940..2931113,2932263..2932346,2933588..2933680,2934859..2934929,2935136..2935327,2935778..2935946,2936596..2936688,2936779..2936883,2937486..2937583,2937848..2937998,2938619..2938732,2941613..2941621,2942307..2942474,2943337..2943426,2944427..2944576,2945758..2945856,2946836..2946925,2947698..2947837,2949605..2949731,2951006..2951086,2951623..2951721,2952298..2952348,2953170..2953355,2957486..2957494,2958822..2958955,2959345..2959417,2959566..2959637,2960040..2960168,2960432..2960530,2961822..2962034,2962359..2962536,2963085..2963199,2963561..2963733,2965237..2965318)
location: region:2882028-2965318:1
so has part: feature:2882028-2882120:1:exon
so has part: feature:2906793-2906852:1:exon
so has part: feature:2916519-2916608:1:exon
so has part: feature:2917827-2917871:1:exon
so has part: feature:2918598-2918642:1:exon
so has part: feature:2918748-2918810:1:exon
so has part: feature:2919555-2919608:1:exon
so has part: feature:2921232-2921258:1:exon
so has part: feature:2922508-2922588:1:exon
so has part: feature:2923600-2923662:1:exon
so has part: feature:2924161-2924196:1:exon
so has part: feature:2924322-2924363:1:exon
so has part: feature:2924472-2924564:1:exon
so has part: feature:2926794-2926847:1:exon
so has part: feature:2926954-2927010:1:exon
so has part: feature:2929072-2929116:1:exon
so has part: feature:2929217-2929270:1:exon
so has part: feature:2929445-2929486:1:exon
so has part: feature:2929968-2930100:1:exon
so has part: feature:2930940-2931113:1:exon
so has part: feature:2932263-2932346:1:exon
so has part: feature:2933588-2933680:1:exon
so has part: feature:2934859-2934929:1:exon
so has part: feature:2935136-2935327:1:exon
so has part: feature:2935778-2935946:1:exon
so has part: feature:2936596-2936688:1:exon
so has part: feature:2936779-2936883:1:exon
so has part: feature:2937486-2937583:1:exon
so has part: feature:2937848-2937998:1:exon
so has part: feature:2938619-2938732:1:exon
so has part: feature:2941613-2941621:1:exon
so has part: feature:2942307-2942474:1:exon
so has part: feature:2943337-2943426:1:exon
so has part: feature:2944427-2944576:1:exon
so has part: feature:2945758-2945856:1:exon
so has part: feature:2946836-2946925:1:exon
so has part: feature:2947698-2947837:1:exon
so has part: feature:2949605-2949731:1:exon
so has part: feature:2951006-2951086:1:exon
so has part: feature:2951623-2951721:1:exon
so has part: feature:2952298-2952348:1:exon
so has part: feature:2953170-2953355:1:exon
so has part: feature:2957486-2957494:1:exon
so has part: feature:2958822-2958955:1:exon
so has part: feature:2959345-2959417:1:exon
so has part: feature:2959566-2959637:1:exon
so has part: feature:2960040-2960168:1:exon
so has part: feature:2960432-2960530:1:exon
so has part: feature:2961822-2962034:1:exon
so has part: feature:2962359-2962536:1:exon
so has part: feature:2963085-2963199:1:exon
so has part: feature:2963561-2963733:1:exon
so has part: feature:2965237-2965318:1:exon

XP_032052431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2882028-2882120:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2906793-2906852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2916519-2916608:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2917827-2917871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2918598-2918642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2918748-2918810:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2919555-2919608:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2921232-2921258:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2922508-2922588:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2923600-2923662:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2924161-2924196:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2924322-2924363:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2924472-2924564:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2926794-2926847:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2926954-2927010:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2929072-2929116:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2929217-2929270:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2929445-2929486:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2929968-2930100:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2930940-2931113:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2932263-2932346:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2933588-2933680:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2934859-2934929:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2935136-2935327:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2935778-2935946:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2936596-2936688:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2936779-2936883:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2937486-2937583:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2937848-2937998:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2938619-2938732:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2941613-2941621:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2942307-2942474:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2943337-2943426:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2944427-2944576:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2945758-2945856:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2946836-2946925:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2947698-2947837:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2949605-2949731:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2951006-2951086:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2951623-2951721:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2952298-2952348:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2953170-2953355:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2957486-2957494:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2958822-2958955:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2959345-2959417:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2959566-2959637:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2960040-2960168:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2960432-2960530:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2961822-2962034:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2962359-2962536:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2963085-2963199:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:2963561-2963733:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:2965237-2965318:1:exon

COL4A5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: COL4A5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-5(IV) chain isoform X4
translation: MEPRWWSRSPAAGCLVVLLLGCWRLDEAAAAACHGCTSVSKCDCSGVKGEKGERGFPGLEGQPGLPGFPGPEGPPGPRGPKGDDGLPGPIGPKGIRGPPGLPGFPGTPGLPGLPGQDGPPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGLPGMKGEAGEIITSLLPGQKGDPGFPGLPGIPGPPGSTGIPGPVGPPGPPGLTGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQIGEQKRPNDIEFQKGDQGIPGDPGPPGLPGPQGPPGLPGGVKGEKGEQGEPGKRGKPGKDGEPGQPGRDGLPGGPGVNGAPGRDGEKGEKGDTGPPGPPGSVISRPGIDATVGPKGSKGLPGLPGAKGERGFSGRPGPPGLPGSPGVTTVGPPGPPGLPGERGQKGDPGLPGVSIPGQPGLDGPRGPPGPPGPPGPPAPSVPPGEGLCEQGPPGPPGIPGQQGFTGERGQKGDQGDTCFNCIGTGISGPPGERGPPGPPGSPGSPGFPGPKGEKGLPGLTGLVGPPGFPGPPGAPGRPGPKGDPGDVLTSPKMKGEKGDPGFPGPPGLPGIDGTPGRDGLPGLPGPKGEPGSVAFKGEMGIPGDPGIPGLPGDKGLPGPPGFGPQGSPGEKGIQGVSGRPGPPGVPGPKGEPGQTITEPGVPGPPGPPGRNGDPGLPGDPGQPGQRGLSGIPGAKGEPGIPGIGLPGPPGPKGFPGTPGPPGAPGTPGRPGLDGPPGPPGFPGQKGDRGFGVPGPTGPPGPPGIKGVQGPKGDPGFPGNPGLPGRAGFDGTPGPKGDPGPSGPPGLPGPPGIPGIGGQGPPGPPGPPGPVGPPGSPGLQGVPGEKGDPGPPGFDVPGPPGDQGTPGYPGPPGLPGPQGSPGPPGRDGIPGFPGAKGEMGVMGAPGPPGPPGTPGRNGLPGSKGNNGLPGPPGPPGPVGQKGIKGEAGLPGPPGKIDPKQLGAKGEKGEPGVPGIPGLSGQKGYQGLQGDPGPPGLSGPPGAPGLPGIKGDTGLPGQPGPTGPPGLKGAMGEMGLPGPPGIKGSQGIAGRPGQPGPAGFPGLKGEKGDPGLSSIGIPGLPGPKGDLGLPGYPGSPGSKGVAGNPGLPGLPGNPGAKGEPGLPGFPGTPGIPGPKGIEGPPGNPGLPGPPGPVGDIGRPGPPGPPGEKGQPGRDGIPGPAGQKGEPGLPGFGRPGPPGLPGLSGQKGELGLPGPPGPPGLPGLKGEPGFQGFPGLQGPPGPPGLPGPPLEGPKGSPGPPGVPGRPGSPGPEGPRGPPGSGGLKGEKGNPGQPGPPGLTGQKGDQGPPGRQGDPGRPGLNGMKGDPGVPGVPGFPGMKGPTGPAGPAGLTGSQGLPGPPGPPGLPGTIGRSIVVKGDPGPPGPPGQPGSKGPPGLPGPQGLPGPIGAPGDPGRDGLPGFDGPAGRKGERGLPGQPGSRGIQGPPGPDGLQGPPGPPGTASVAHGFLITRHSQTRDTPLCPQGTSRIYDGFSLLYVQGNERAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPLTGKSIQPFISRCVVCEAPAMVIAVHSQTIQIPSCPPGWDSLWIGYSFMMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVEVSEMFSKPQSETLKAGDLRTRISRCQVCMKKT
SIO_010081: COL4A5
subclass of: SO_0000673
so part of: COL4A5
location: join(2882028..2882120,2906793..2906852,2916519..2916608,2917827..2917871,2918598..2918642,2918748..2918810,2919555..2919608,2921232..2921258,2922508..2922588,2923600..2923662,2924161..2924196,2924322..2924363,2924472..2924564,2926794..2926847,2926954..2927010,2929072..2929116,2929217..2929270,2929445..2929486,2929968..2930100,2930940..2931113,2932263..2932346,2933588..2933680,2934859..2934929,2935136..2935327,2935778..2935946,2936596..2936688,2936779..2936883,2937486..2937583,2937848..2937998,2938619..2938732,2941613..2941621,2942307..2942474,2943337..2943426,2944427..2944576,2945758..2945856,2946836..2946925,2947698..2947837,2949605..2949731,2951006..2951086,2951623..2951721,2952298..2952348,2953170..2953355,2958822..2958955,2959345..2959417,2959566..2959637,2960040..2960168,2960432..2960530,2961822..2962034,2962359..2962536,2963085..2963199,2963561..2963733,2965237..2965318)
location: region:2882028-2965318:1
so has part: feature:2882028-2882120:1:exon
so has part: feature:2906793-2906852:1:exon
so has part: feature:2916519-2916608:1:exon
so has part: feature:2917827-2917871:1:exon
so has part: feature:2918598-2918642:1:exon
so has part: feature:2918748-2918810:1:exon
so has part: feature:2919555-2919608:1:exon
so has part: feature:2921232-2921258:1:exon
so has part: feature:2922508-2922588:1:exon
so has part: feature:2923600-2923662:1:exon
so has part: feature:2924161-2924196:1:exon
so has part: feature:2924322-2924363:1:exon
so has part: feature:2924472-2924564:1:exon
so has part: feature:2926794-2926847:1:exon
so has part: feature:2926954-2927010:1:exon
so has part: feature:2929072-2929116:1:exon
so has part: feature:2929217-2929270:1:exon
so has part: feature:2929445-2929486:1:exon
so has part: feature:2929968-2930100:1:exon
so has part: feature:2930940-2931113:1:exon
so has part: feature:2932263-2932346:1:exon
so has part: feature:2933588-2933680:1:exon
so has part: feature:2934859-2934929:1:exon
so has part: feature:2935136-2935327:1:exon
so has part: feature:2935778-2935946:1:exon
so has part: feature:2936596-2936688:1:exon
so has part: feature:2936779-2936883:1:exon
so has part: feature:2937486-2937583:1:exon
so has part: feature:2937848-2937998:1:exon
so has part: feature:2938619-2938732:1:exon
so has part: feature:2941613-2941621:1:exon
so has part: feature:2942307-2942474:1:exon
so has part: feature:2943337-2943426:1:exon
so has part: feature:2944427-2944576:1:exon
so has part: feature:2945758-2945856:1:exon
so has part: feature:2946836-2946925:1:exon
so has part: feature:2947698-2947837:1:exon
so has part: feature:2949605-2949731:1:exon
so has part: feature:2951006-2951086:1:exon
so has part: feature:2951623-2951721:1:exon
so has part: feature:2952298-2952348:1:exon
so has part: feature:2953170-2953355:1:exon
so has part: feature:2958822-2958955:1:exon
so has part: feature:2959345-2959417:1:exon
so has part: feature:2959566-2959637:1:exon
so has part: feature:2960040-2960168:1:exon
so has part: feature:2960432-2960530:1:exon
so has part: feature:2961822-2962034:1:exon
so has part: feature:2962359-2962536:1:exon
so has part: feature:2963085-2963199:1:exon
so has part: feature:2963561-2963733:1:exon
so has part: feature:2965237-2965318:1:exon

XP_032052432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2882028-2882120:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2906793-2906852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2916519-2916608:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2917827-2917871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2918598-2918642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2918748-2918810:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2919555-2919608:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2921232-2921258:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2922508-2922588:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2923600-2923662:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2924161-2924196:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2924322-2924363:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2924472-2924564:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2926794-2926847:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2926954-2927010:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2929072-2929116:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2929217-2929270:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2929445-2929486:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2929968-2930100:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2930940-2931113:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2932263-2932346:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2933588-2933680:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2934859-2934929:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2935136-2935327:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2935778-2935946:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2936596-2936688:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2936779-2936883:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2937486-2937583:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2937848-2937998:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2938619-2938732:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2941613-2941621:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2942307-2942474:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2943337-2943426:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2944427-2944576:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2945758-2945856:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2946836-2946925:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2947698-2947837:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2949605-2949731:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2951006-2951086:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2951623-2951721:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2952298-2952348:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2953170-2953355:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2958822-2958955:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2959345-2959417:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2959566-2959637:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2960040-2960168:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2960432-2960530:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2961822-2962034:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2962359-2962536:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2963085-2963199:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2963561-2963733:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:2965237-2965318:1:exon

COL4A5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: COL4A5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-5(IV) chain isoform X2
translation: MEPRWWSRSPAAGCLVVLLLGCWRLDEAAAAACHGCTSVSKCDCSGVKGEKGERGFPGLEGQPGLPGFPGPEGPPGPRGPKGDDGLPGPIGPKGIRGPPGLPGFPGTPGLPGLPGQDGPPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGLPGMKGEAGEIITSLLPGQKGDPGFPGLPGIPGPPGSTGIPGPVGPPGPPGLTGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQIGEQKRPNDIEFQKGDQGIPGDPGPPGLPGPQGPPGLPGGVKGEKGEQGEPGKRGKPGKDGEPGQPGRDGLPGGPGVNGAPGRDGEKGEKGDTGPPGPPGSVISRPGIDATVGPKGSKGLPGLPGAKGERGFSGRPGPPGLPGSPGVTTVGPPGPPGLPGERGQKGDPGLPGVSIPGQPGLDGPRGPPGPPGPPGPPAPSVPPGEGLCEQGPPGPPGIPGQQGFTGERGQKGDQGDTCFNCIGTGISGPPGERGPPGPPGSPGSPGFPGPKGEKGLPGLTGLVGPPGFPGPPGAPGRPGPKGDPGDVLTSPKMKGEKGDPGFPGPPGLPGIDGTPGRDGLPGLPGPKGEPGSVAFKGEMGIPGDPGIPGLPGDKGLPGPPGFGPQGSPGEKGIQGVSGRPGPPGVPGPKGEPGQTITEPGVPGPPGPPGRNGDPGLPGDPGQPGQRGLSGIPGAKGEPGIPGIGLPGPPGPKGFPGTPGPPGAPGTPGRPGLDGPPGPPGFPGQKGDRGFGVPGPTGPPGPPGIKGVQGPKGDPGFPGNPGLPGRAGFDGTPGPKGDPGPSGPPGLPGPPGIPGIGGQGPPGPPGPPGPVGPPGLQGVPGEKGDPGPPGFDVPGPPGDQGTPGYPGPPGLPGPQGSPGPPGRDGIPGFPGAKGEMGVMGAPGPPGPPGTPGRNGLPGSKGNNGLPGPPGPPGPVGQKGIKGEAGLPGPPGKIDPKQLGAKGEKGEPGVPGIPGLSGQKGYQGLQGDPGPPGLSGPPGAPGLPGIKGDTGLPGQPGPTGPPGLKGAMGEMGLPGPPGIKGSQGIAGRPGQPGPAGFPGLKGEKGDPGLSSIGIPGLPGPKGDLGLPGYPGSPGSKGVAGNPGLPGLPGNPGAKGEPGLPGFPGTPGIPGPKGIEGPPGNPGLPGPPGPVGDIGRPGPPGPPGEKGQPGRDGIPGPAGQKGEPGLPGFGRPGPPGLPGLSGQKGELGLPGPPGPPGLPGLKGEPGFQGFPGLQGPPGPPGLPGPPLEGPKGSPGPPGVPGRPGPSGPPGSPGPEGPRGPPGSGGLKGEKGNPGQPGPPGLTGQKGDQGPPGRQGDPGRPGLNGMKGDPGVPGVPGFPGMKGPTGPAGPAGLTGSQGLPGPPGPPGLPGTIGRSIVVKGDPGPPGPPGQPGSKGPPGLPGPQGLPGPIGAPGDPGRDGLPGFDGPAGRKGERGLPGQPGSRGIQGPPGPDGLQGPPGPPGTASVAHGFLITRHSQTRDTPLCPQGTSRIYDGFSLLYVQGNERAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPLTGKSIQPFISRCVVCEAPAMVIAVHSQTIQIPSCPPGWDSLWIGYSFMMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVEVSEMFSKPQSETLKAGDLRTRISRCQVCMKKT
SIO_010081: COL4A5
subclass of: SO_0000673
so part of: COL4A5
location: join(2882028..2882120,2906793..2906852,2916519..2916608,2917827..2917871,2918598..2918642,2918748..2918810,2919555..2919608,2921232..2921258,2922508..2922588,2923600..2923662,2924161..2924196,2924322..2924363,2924472..2924564,2926794..2926847,2926954..2927010,2929072..2929116,2929217..2929270,2929445..2929486,2929968..2930100,2930940..2931113,2932263..2932346,2933588..2933680,2934859..2934929,2935136..2935327,2935778..2935946,2936596..2936688,2936779..2936883,2937486..2937583,2937848..2937998,2938619..2938732,2942307..2942474,2943337..2943426,2944427..2944576,2945758..2945856,2946836..2946925,2947698..2947837,2949605..2949731,2951006..2951086,2951623..2951721,2952298..2952348,2953170..2953355,2955194..2955202,2957486..2957494,2958822..2958955,2959345..2959417,2959566..2959637,2960040..2960168,2960432..2960530,2961822..2962034,2962359..2962536,2963085..2963199,2963561..2963733,2965237..2965318)
location: region:2882028-2965318:1
so has part: feature:2882028-2882120:1:exon
so has part: feature:2906793-2906852:1:exon
so has part: feature:2916519-2916608:1:exon
so has part: feature:2917827-2917871:1:exon
so has part: feature:2918598-2918642:1:exon
so has part: feature:2918748-2918810:1:exon
so has part: feature:2919555-2919608:1:exon
so has part: feature:2921232-2921258:1:exon
so has part: feature:2922508-2922588:1:exon
so has part: feature:2923600-2923662:1:exon
so has part: feature:2924161-2924196:1:exon
so has part: feature:2924322-2924363:1:exon
so has part: feature:2924472-2924564:1:exon
so has part: feature:2926794-2926847:1:exon
so has part: feature:2926954-2927010:1:exon
so has part: feature:2929072-2929116:1:exon
so has part: feature:2929217-2929270:1:exon
so has part: feature:2929445-2929486:1:exon
so has part: feature:2929968-2930100:1:exon
so has part: feature:2930940-2931113:1:exon
so has part: feature:2932263-2932346:1:exon
so has part: feature:2933588-2933680:1:exon
so has part: feature:2934859-2934929:1:exon
so has part: feature:2935136-2935327:1:exon
so has part: feature:2935778-2935946:1:exon
so has part: feature:2936596-2936688:1:exon
so has part: feature:2936779-2936883:1:exon
so has part: feature:2937486-2937583:1:exon
so has part: feature:2937848-2937998:1:exon
so has part: feature:2938619-2938732:1:exon
so has part: feature:2942307-2942474:1:exon
so has part: feature:2943337-2943426:1:exon
so has part: feature:2944427-2944576:1:exon
so has part: feature:2945758-2945856:1:exon
so has part: feature:2946836-2946925:1:exon
so has part: feature:2947698-2947837:1:exon
so has part: feature:2949605-2949731:1:exon
so has part: feature:2951006-2951086:1:exon
so has part: feature:2951623-2951721:1:exon
so has part: feature:2952298-2952348:1:exon
so has part: feature:2953170-2953355:1:exon
so has part: feature:2955194-2955202:1:exon
so has part: feature:2957486-2957494:1:exon
so has part: feature:2958822-2958955:1:exon
so has part: feature:2959345-2959417:1:exon
so has part: feature:2959566-2959637:1:exon
so has part: feature:2960040-2960168:1:exon
so has part: feature:2960432-2960530:1:exon
so has part: feature:2961822-2962034:1:exon
so has part: feature:2962359-2962536:1:exon
so has part: feature:2963085-2963199:1:exon
so has part: feature:2963561-2963733:1:exon
so has part: feature:2965237-2965318:1:exon

XP_032052430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2882028-2882120:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2906793-2906852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2916519-2916608:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2917827-2917871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2918598-2918642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2918748-2918810:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2919555-2919608:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2921232-2921258:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2922508-2922588:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2923600-2923662:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2924161-2924196:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2924322-2924363:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2924472-2924564:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2926794-2926847:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2926954-2927010:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2929072-2929116:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2929217-2929270:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2929445-2929486:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2929968-2930100:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2930940-2931113:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2932263-2932346:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2933588-2933680:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2934859-2934929:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2935136-2935327:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2935778-2935946:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2936596-2936688:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2936779-2936883:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2937486-2937583:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2937848-2937998:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2938619-2938732:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2942307-2942474:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2943337-2943426:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2944427-2944576:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2945758-2945856:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2946836-2946925:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2947698-2947837:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2949605-2949731:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2951006-2951086:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2951623-2951721:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2952298-2952348:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2953170-2953355:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2955194-2955202:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2957486-2957494:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2958822-2958955:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2959345-2959417:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2959566-2959637:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2960040-2960168:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2960432-2960530:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2961822-2962034:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2962359-2962536:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2963085-2963199:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:2963561-2963733:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:2965237-2965318:1:exon

COL4A5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: COL4A5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-5(IV) chain isoform X5
translation: MEPRWWSRSPAAGCLVVLLLGCWRLDEAAAAACHGCTSVSKCDCSGVKGEKGERGFPGLEGQPGLPGFPGPEGPPGPRGPKGDDGLPGPIGPKGIRGPPGLPGFPGTPGLPGLPGQDGPPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGLPGMKGEAGEIITSLLPGQKGDPGFPGLPGIPGPPGSTGIPGPVGPPGPPGLTGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQIGEQKRPNDIEFQKGDQGIPGDPGPPGLPGPQGPPGLPGGVKGEKGEQGEPGKRGKPGKDGEPGQPGRDGLPGGPGVNGAPGRDGEKGEKGDTGPPGPPGSVISRPGIDATVGPKGSKGLPGLPGAKGERGFSGRPGPPGLPGSPGVTTVGPPGPPGLPGERGQKGDPGLPGVSIPGQPGLDGPRGPPGPPGPPGPPAPSVPPGEGLCEQGPPGPPGIPGQQGFTGERGQKGDQGDTCFNCIGTGISGPPGERGPPGPPGSPGSPGFPGPKGEKGLPGLTGLVGPPGFPGPPGAPGRPGPKGDPGDVLTSPKMKGEKGDPGFPGPPGLPGIDGTPGRDGLPGLPGPKGEPGSVAFKGEMGIPGDPGIPGLPGDKGLPGPPGFGPQGSPGEKGIQGVSGRPGPPGVPGPKGEPGQTITEPGVPGPPGPPGRNGDPGLPGDPGQPGQRGLSGIPGAKGEPGIPGIGLPGPPGPKGFPGTPGPPGAPGTPGRPGLDGPPGPPGFPGQKGDRGFGVPGPTGPPGPPGIKGVQGPKGDPGFPGNPGLPGRAGFDGTPGPKGDPGPSGPPGLPGPPGIPGIGGQGPPGPPGPPGPVGPPGLQGVPGEKGDPGPPGFDVPGPPGDQGTPGYPGPPGLPGPQGSPGPPGRDGIPGFPGAKGEMGVMGAPGPPGPPGTPGRNGLPGSKGNNGLPGPPGPPGPVGQKGIKGEAGLPGPPGKIDPKQLGAKGEKGEPGVPGIPGLSGQKGYQGLQGDPGPPGLSGPPGAPGLPGIKGDTGLPGQPGPTGPPGLKGAMGEMGLPGPPGIKGSQGIAGRPGQPGPAGFPGLKGEKGDPGLSSIGIPGLPGPKGDLGLPGYPGSPGSKGVAGNPGLPGLPGNPGAKGEPGLPGFPGTPGIPGPKGIEGPPGNPGLPGPPGPVGDIGRPGPPGPPGEKGQPGRDGIPGPAGQKGEPGLPGFGRPGPPGLPGLSGQKGELGLPGPPGPPGLPGLKGEPGFQGFPGLQGPPGPPGLPGPPLEGPKGSPGPPGVPGRPGSPGPEGPRGPPGSGGLKGEKGNPGQPGPPGLTGQKGDQGPPGRQGDPGRPGLNGMKGDPGVPGVPGFPGMKGPTGPAGPAGLTGSQGLPGPPGPPGLPGTIGRSIVVKGDPGPPGPPGQPGSKGPPGLPGPQGLPGPIGAPGDPGRDGLPGFDGPAGRKGERGLPGQPGSRGIQGPPGPDGLQGPPGPPGTASVAHGFLITRHSQTRDTPLCPQGTSRIYDGFSLLYVQGNERAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPLTGKSIQPFISRCVVCEAPAMVIAVHSQTIQIPSCPPGWDSLWIGYSFMMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVEVSEMFSKPQSETLKAGDLRTRISRCQVCMKKT
SIO_010081: COL4A5
subclass of: SO_0000673
so part of: COL4A5
location: join(2882028..2882120,2906793..2906852,2916519..2916608,2917827..2917871,2918598..2918642,2918748..2918810,2919555..2919608,2921232..2921258,2922508..2922588,2923600..2923662,2924161..2924196,2924322..2924363,2924472..2924564,2926794..2926847,2926954..2927010,2929072..2929116,2929217..2929270,2929445..2929486,2929968..2930100,2930940..2931113,2932263..2932346,2933588..2933680,2934859..2934929,2935136..2935327,2935778..2935946,2936596..2936688,2936779..2936883,2937486..2937583,2937848..2937998,2938619..2938732,2942307..2942474,2943337..2943426,2944427..2944576,2945758..2945856,2946836..2946925,2947698..2947837,2949605..2949731,2951006..2951086,2951623..2951721,2952298..2952348,2953170..2953355,2958822..2958955,2959345..2959417,2959566..2959637,2960040..2960168,2960432..2960530,2961822..2962034,2962359..2962536,2963085..2963199,2963561..2963733,2965237..2965318)
location: region:2882028-2965318:1
so has part: feature:2882028-2882120:1:exon
so has part: feature:2906793-2906852:1:exon
so has part: feature:2916519-2916608:1:exon
so has part: feature:2917827-2917871:1:exon
so has part: feature:2918598-2918642:1:exon
so has part: feature:2918748-2918810:1:exon
so has part: feature:2919555-2919608:1:exon
so has part: feature:2921232-2921258:1:exon
so has part: feature:2922508-2922588:1:exon
so has part: feature:2923600-2923662:1:exon
so has part: feature:2924161-2924196:1:exon
so has part: feature:2924322-2924363:1:exon
so has part: feature:2924472-2924564:1:exon
so has part: feature:2926794-2926847:1:exon
so has part: feature:2926954-2927010:1:exon
so has part: feature:2929072-2929116:1:exon
so has part: feature:2929217-2929270:1:exon
so has part: feature:2929445-2929486:1:exon
so has part: feature:2929968-2930100:1:exon
so has part: feature:2930940-2931113:1:exon
so has part: feature:2932263-2932346:1:exon
so has part: feature:2933588-2933680:1:exon
so has part: feature:2934859-2934929:1:exon
so has part: feature:2935136-2935327:1:exon
so has part: feature:2935778-2935946:1:exon
so has part: feature:2936596-2936688:1:exon
so has part: feature:2936779-2936883:1:exon
so has part: feature:2937486-2937583:1:exon
so has part: feature:2937848-2937998:1:exon
so has part: feature:2938619-2938732:1:exon
so has part: feature:2942307-2942474:1:exon
so has part: feature:2943337-2943426:1:exon
so has part: feature:2944427-2944576:1:exon
so has part: feature:2945758-2945856:1:exon
so has part: feature:2946836-2946925:1:exon
so has part: feature:2947698-2947837:1:exon
so has part: feature:2949605-2949731:1:exon
so has part: feature:2951006-2951086:1:exon
so has part: feature:2951623-2951721:1:exon
so has part: feature:2952298-2952348:1:exon
so has part: feature:2953170-2953355:1:exon
so has part: feature:2958822-2958955:1:exon
so has part: feature:2959345-2959417:1:exon
so has part: feature:2959566-2959637:1:exon
so has part: feature:2960040-2960168:1:exon
so has part: feature:2960432-2960530:1:exon
so has part: feature:2961822-2962034:1:exon
so has part: feature:2962359-2962536:1:exon
so has part: feature:2963085-2963199:1:exon
so has part: feature:2963561-2963733:1:exon
so has part: feature:2965237-2965318:1:exon

XP_032052433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2882028-2882120:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2906793-2906852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2916519-2916608:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2917827-2917871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2918598-2918642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2918748-2918810:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2919555-2919608:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2921232-2921258:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2922508-2922588:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2923600-2923662:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2924161-2924196:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2924322-2924363:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2924472-2924564:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2926794-2926847:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2926954-2927010:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2929072-2929116:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2929217-2929270:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2929445-2929486:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2929968-2930100:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2930940-2931113:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2932263-2932346:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2933588-2933680:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2934859-2934929:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2935136-2935327:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2935778-2935946:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2936596-2936688:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2936779-2936883:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2937486-2937583:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2937848-2937998:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2938619-2938732:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2942307-2942474:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2943337-2943426:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2944427-2944576:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2945758-2945856:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2946836-2946925:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2947698-2947837:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2949605-2949731:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2951006-2951086:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2951623-2951721:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2952298-2952348:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2953170-2953355:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2958822-2958955:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2959345-2959417:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2959566-2959637:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2960040-2960168:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2960432-2960530:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2961822-2962034:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2962359-2962536:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2963085-2963199:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2963561-2963733:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2965237-2965318:1:exon

IRS4
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: IRS4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2972819..2993687)
location: region:2972819-2993687:-1
so has part: feature:2972819-2993687:-1:exon
subclass of: SO_0000010

116494470
type: Gene
SIO_000068: ncbigene

position:2972819:-1
position: 2972819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2993687:-1
position: 2993687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2972819-2993687:-1:exon

IRS4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: IRS4
product: insulin receptor substrate 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196385.1
SIO_010081: IRS4
subclass of: SO_0000673
so part of: IRS4
location: complement(join(2972819..2973905,2990336..2993687))
location: region:2972819-2993687:-1
so has part: feature:2990336-2993687:-1:exon
so has part: feature:2972819-2973905:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2990336-2993687:-1:exon

position:2990336:-1
position: 2990336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2972819-2973905:-1:exon

position:2973905:-1
position: 2973905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IRS4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: IRS4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin receptor substrate 4
translation: MASGVNGAAGAEGEPGEAGRCPSPQPHHLLLLLRRSPSASLCGPPEAGGGGGARGGQPPGSAARGGEDVRKCGYLRKQKHGHKRYFVLRAESRLAPARLEYYDSEKKFKSSLRAGGGAAGLCCPPPKRVIPLYQCFTVSRRADAKHKHIIALYTKDEYFAMLAENEAEQEAWYQAISELMSQSKRGFLEQEEQAEQQLDEDDEHYGAALRPGTVFKEVWQVNVKPKGLGQTKNLTGVYRLCLSSKAIHLVKLNSEVPSVHLQLMNIRRCGHSENFFFIEVGRSASIGPGELWMQVDDSVVAQNMHETFLETMKALKAFAEFRPRSKSQSSGGGGGTNPISFITTRRHLGNLPPSQTGLQRRSRTESVVGGTPPTTKSSNSYRFRTSSEGEGTMARPFRSVTGSLIHLNTARMNLGRQEGSGRYVRAAFSSSYHTRSASLPVSHFPSTTSPISVSSSSGHGSASDMLTRPSSSSVCGSPSDGGFISSDEYGSSPGDFRYFRVRSNTPDSLGNTPPIREENCLSEYMSMSKQQADDSLRDDYMEAEKCFRKRTYSLTKPTSVAVQQKTTQTTASLDEDSGGNHGRLLYSETPKLKGNHELEYNDSNLDSVCNQSRSKARDDGYMPMMPGVASSLSSSSDYLPMTPKSMSVPKQINNSWSPSQVDSRGYMMMFPKASSSPVRSPLTGFISKGSNEKIVNNEYMDMSPGNSAPKHPGDSNYIHNNSVSKGFSSYFSLPRSFKALSGQNGDHSEYVPMSSPGKLLYGGPENVKSINSEALSNGISKSPVVKGEEGGLVQNRATRPTRLPLGTRGSNTIPRMYDRTVPPEPASPGEYINIDFNEKASNTPYSLSAEGSPSSLGSSSDHRQSPLSDYMSVDLDVQSPKVAKELSNSLTDISIYASSSIPRNQPNPDYARLSFGTTCVSAASNRTDDYTEMTFNMAATPPRPFASESDDGVKIDSPSSIVNRLCIVDRYAGSSSFSVPSSDPPVGPKVIRADPQGRRRHSSETFSSAGTVTTSSSFFTDSSKRHSSASFDNVWLKPDENISDGQESKMSRDTSTGFQNGLNYIALNLRDDPISCEASTATPTCHLQNGTSSLDSGAYVSIDFTRSDGLKCNAARKD
SIO_010081: IRS4
subclass of: SO_0000673
so part of: IRS4
location: complement(join(2973901..2973905,2990336..2993687))
location: region:2973901-2993687:-1
so has part: feature:2990336-2993687:-1:exon
so has part: feature:2973901-2973905:-1:exon

XP_032052276.1
type: Protein
SIO_000068: ncbiprotein

position:2973901:-1
position: 2973901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2990336-2993687:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2973901-2973905:-1:exon

NXT2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: NXT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3068649..3074767
location: region:3068649-3074767:1
so has part: feature:3068649-3074767:1:exon
subclass of: SO_0000010

116494381
type: Gene
SIO_000068: ncbigene

position:3068649:1
position: 3068649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3074767:1
position: 3074767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3068649-3074767:1:exon

NXT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: NXT2
product: nuclear transport factor 2 like export factor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196252.1
SIO_010081: NXT2
subclass of: SO_0000673
so part of: NXT2
location: join(3068649..3068738,3070455..3070541,3071647..3071791,3072692..3074767)
location: region:3068649-3074767:1
so has part: feature:3068649-3068738:1:exon
so has part: feature:3070455-3070541:1:exon
so has part: feature:3071647-3071791:1:exon
so has part: feature:3072692-3074767:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3068649-3068738:1:exon

position:3068738:1
position: 3068738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3070455-3070541:1:exon

position:3070455:1
position: 3070455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3070541:1
position: 3070541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3071647-3071791:1:exon

position:3071647:1
position: 3071647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3071791:1
position: 3071791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3072692-3074767:1:exon

position:3072692:1
position: 3072692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NXT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: NXT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NTF2-related export protein 2
translation: MAAALDFKTYVDQACRAAEEFVNIYYETMDKRRRVLTRLYLDKATLVWNGNAVSGQEALNEFFEMLPSSEFQINVLDCQPVHEQATQSQTTVLVVTCGTVKFDGNKQRYFNQNFLLTAQATPTNTVWKIASDCFRFQDWAS
SIO_010081: NXT2
subclass of: SO_0000673
so part of: NXT2
location: join(3068724..3068738,3070455..3070541,3071647..3071791,3072692..3072870)
location: region:3068724-3072870:1
so has part: feature:3068724-3068738:1:exon
so has part: feature:3070455-3070541:1:exon
so has part: feature:3071647-3071791:1:exon
so has part: feature:3072692-3072870:1:exon

XP_032052143.1
type: Protein
SIO_000068: ncbiprotein

position:3068724:1
position: 3068724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3072870:1
position: 3072870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3068724-3068738:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3070455-3070541:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3071647-3071791:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3072692-3072870:1:exon

KCNE5
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: KCNE5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3080391..3080699)
location: region:3080391-3080699:-1
so has part: feature:3080391-3080699:-1:exon
subclass of: SO_0000010

116494472
type: Gene
SIO_000068: ncbigene

position:3080391:-1
position: 3080391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3080699:-1
position: 3080699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3080391-3080699:-1:exon

KCNE5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: KCNE5
product: potassium voltage-gated channel subfamily E regulatory subunit 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_032196386.1
SIO_010081: KCNE5
subclass of: SO_0000673
so part of: KCNE5
location: complement(3080391..3080699)
location: region:3080391-3080699:-1
so has part: feature:3080391-3080699:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3080391-3080699:-1:exon

KCNE5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: KCNE5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily E regulatory beta subunit 5
translation: MNCSEARRLQALLGSLLRELRRGTNGSAAAGQGPGGDASLYILLIMVFYGCLAGALILAYTRSRKLESKHDPYHLYIERDWGRGGPGQPAEEGGPAEEQRLM
SIO_010081: KCNE5
subclass of: SO_0000673
so part of: KCNE5
location: complement(3080391..3080699)
location: region:3080391-3080699:-1
so has part: feature:3080391-3080699:-1:exon

XP_032052277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3080391-3080699:-1:exon

ACSL4
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: ACSL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3085463..3123923)
location: region:3085463-3123923:-1
so has part: feature:3085463-3123923:-1:exon
subclass of: SO_0000010

116494297
type: Gene
SIO_000068: ncbigene

position:3085463:-1
position: 3085463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3123923:-1
position: 3123923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3085463-3123923:-1:exon

ACSL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ACSL4
product: acyl-CoA synthetase long chain family member 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032196104.1
SIO_010081: ACSL4
subclass of: SO_0000673
so part of: ACSL4
location: complement(join(3085463..3087927,3089470..3089627,3090331..3090445,3090994..3091185,3091413..3091487,3091675..3091847,3092631..3092770,3095205..3095276,3096138..3096261,3097415..3097565,3098910..3099048,3099140..3099249,3100543..3100720,3101001..3101240,3103754..3103802,3112447..3112506,3123816..3123923))
location: region:3085463-3123923:-1
so has part: feature:3123816-3123923:-1:exon
so has part: feature:3112447-3112506:-1:exon
so has part: feature:3103754-3103802:-1:exon
so has part: feature:3101001-3101240:-1:exon
so has part: feature:3100543-3100720:-1:exon
so has part: feature:3099140-3099249:-1:exon
so has part: feature:3098910-3099048:-1:exon
so has part: feature:3097415-3097565:-1:exon
so has part: feature:3096138-3096261:-1:exon
so has part: feature:3095205-3095276:-1:exon
so has part: feature:3092631-3092770:-1:exon
so has part: feature:3091675-3091847:-1:exon
so has part: feature:3091413-3091487:-1:exon
so has part: feature:3090994-3091185:-1:exon
so has part: feature:3090331-3090445:-1:exon
so has part: feature:3089470-3089627:-1:exon
so has part: feature:3085463-3087927:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3123816-3123923:-1:exon

position:3123816:-1
position: 3123816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3112447-3112506:-1:exon

position:3112447:-1
position: 3112447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3112506:-1
position: 3112506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3103754-3103802:-1:exon

position:3103754:-1
position: 3103754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3103802:-1
position: 3103802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3101001-3101240:-1:exon

position:3101001:-1
position: 3101001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3101240:-1
position: 3101240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3100543-3100720:-1:exon

position:3100543:-1
position: 3100543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3100720:-1
position: 3100720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3099140-3099249:-1:exon

position:3099140:-1
position: 3099140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition