Aythya fuligula isolate bAytFul2 chromosome 8, bAytFul2.pri, whole genome shotgun sequence.
type: Entry
definition: Aythya fuligula isolate bAytFul2 chromosome 8, bAytFul2.pri, whole genome shotgun sequence.
sequence version: NC_045566.1
sequence date: 2020-01-30
sequence: sequence
division: CON
label: NC_045566.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA602521
dblink: SAMN12621346
keyword: WGS
keyword: RefSeq
source: Aythya fuligula (tufted duck)
organism: Aythya fuligula
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Aythyinae; Aythya.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020307.1.\nAssembly name: bAytFul2.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/12/31. The original whole-genome shotgun project has the\naccession WNMM00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 20-SEP-2019\nAssembly Method :: FALCON v. 2018.31.08-03.06; FALCON-Unzip\n v. 6.0.0.47841; purge_haplotigs v.\n v1.0.3+ 1.Nov.2018; scaff10x v. 4.1.0;\n Bionano Solve DLS v. 3.2.1; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishing\n & gap filling v. 6.0.0.47841; longranger\n align v. 2.2.2; freebayes Illumina\n polishing v. 1.3; gEVAL manual curation\n v. 2019-09-20; VGP assembly pipeline\n individual v. 1.5\nAssembly Name :: bAytFul2.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 64.03x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Aythya fuligula Annotation Release\n 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 32406295
topology: linear
so has quality: SO_0000987
location: 1..32406295
location: region:1-32406295:1
RO_0002162: 219594

NC_045566
type: RefSeq
SIO_000068: refseq

PRJNA602521
type: BioProject
SIO_000068: bioproject

SAMN12621346
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32406295:1
position: 32406295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-32406295:1:source
so part of: sequence
organism: Aythya fuligula
mol type: genomic DNA
isolate: bAytFul2
chromosome: 8
sex: female
tissue type: lung (powdered)
dev stage: adult
country: Sweden
lat lon: 59.8509 N 17.6300 E
collection date: 28-Aug-2017
collected by: Patrik Ellstrom, Mahmoud Naguib, Josef Jarhult

219594
type: Taxonomy
SIO_000068: taxonomy

LOC116492239
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116492239
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1466..5520)
location: region:1466-5520:-1
so has part: feature:1466-5520:-1:exon
subclass of: SO_0000011

116492239
type: Gene
SIO_000068: ncbigene

position:1466:-1
position: 1466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5520:-1
position: 5520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1466-5520:-1:exon

LOC116492239
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116492239
product: uncharacterized LOC116492239, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004253559.1
SIO_010081: LOC116492239
subclass of: SO_0000673
so part of: LOC116492239
location: complement(join(1466..1590,2539..2632,3018..3067,3189..3301,5171..5224,5494..5520))
location: region:1466-5520:-1
so has part: feature:5494-5520:-1:exon
so has part: feature:5171-5224:-1:exon
so has part: feature:3189-3301:-1:exon
so has part: feature:3018-3067:-1:exon
so has part: feature:2539-2632:-1:exon
so has part: feature:1466-1590:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5494-5520:-1:exon

position:5494:-1
position: 5494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5171-5224:-1:exon

position:5171:-1
position: 5171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5224:-1
position: 5224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3189-3301:-1:exon

position:3189:-1
position: 3189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3301:-1
position: 3301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3018-3067:-1:exon

position:3018:-1
position: 3018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3067:-1
position: 3067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2539-2632:-1:exon

position:2539:-1
position: 2539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2632:-1
position: 2632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1466-1590:-1:exon

position:1590:-1
position: 1590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116492239
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116492239
product: uncharacterized LOC116492239, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004253558.1
SIO_010081: LOC116492239
subclass of: SO_0000673
so part of: LOC116492239
location: complement(join(1466..1590,2294..2429,2539..2632,3018..3067,3189..3301,5171..5224,5494..5520))
location: region:1466-5520:-1
so has part: feature:5494-5520:-1:exon
so has part: feature:5171-5224:-1:exon
so has part: feature:3189-3301:-1:exon
so has part: feature:3018-3067:-1:exon
so has part: feature:2539-2632:-1:exon
so has part: feature:2294-2429:-1:exon
so has part: feature:1466-1590:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5494-5520:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5171-5224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3189-3301:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3018-3067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2539-2632:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2294-2429:-1:exon

position:2294:-1
position: 2294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2429:-1
position: 2429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1466-1590:-1:exon

LOC116492239
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: lncRNA
gene: LOC116492239
product: uncharacterized LOC116492239, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004253557.1
SIO_010081: LOC116492239
subclass of: SO_0000673
so part of: LOC116492239
location: complement(join(2212..2429,2539..2632,3018..3067,3189..3301,5171..5224,5494..5520))
location: region:2212-5520:-1
so has part: feature:5494-5520:-1:exon
so has part: feature:5171-5224:-1:exon
so has part: feature:3189-3301:-1:exon
so has part: feature:3018-3067:-1:exon
so has part: feature:2539-2632:-1:exon
so has part: feature:2212-2429:-1:exon

position:2212:-1
position: 2212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5494-5520:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5171-5224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3189-3301:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3018-3067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2539-2632:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2212-2429:-1:exon

MSH4
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: MSH4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(19074..51714)
location: region:19074-51714:-1
so has part: feature:19074-51714:-1:exon
subclass of: SO_0000010

116492238
type: Gene
SIO_000068: ncbigene

position:19074:-1
position: 19074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51714:-1
position: 51714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19074-51714:-1:exon

MSH4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: MSH4
product: mutS homolog 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032192815.1
SIO_010081: MSH4
subclass of: SO_0000673
so part of: MSH4
location: complement(join(19074..19824,20173..20261,21361..21535,23015..23143,23672..23790,26083..26283,28121..28245,29035..29138,29579..29715,31138..31307,31782..31846,32162..32236,37071..37138,37612..37784,40054..40227,40848..40963,42081..42188,45670..45833,49035..49196,51415..51714))
location: region:19074-51714:-1
so has part: feature:51415-51714:-1:exon
so has part: feature:49035-49196:-1:exon
so has part: feature:45670-45833:-1:exon
so has part: feature:42081-42188:-1:exon
so has part: feature:40848-40963:-1:exon
so has part: feature:40054-40227:-1:exon
so has part: feature:37612-37784:-1:exon
so has part: feature:37071-37138:-1:exon
so has part: feature:32162-32236:-1:exon
so has part: feature:31782-31846:-1:exon
so has part: feature:31138-31307:-1:exon
so has part: feature:29579-29715:-1:exon
so has part: feature:29035-29138:-1:exon
so has part: feature:28121-28245:-1:exon
so has part: feature:26083-26283:-1:exon
so has part: feature:23672-23790:-1:exon
so has part: feature:23015-23143:-1:exon
so has part: feature:21361-21535:-1:exon
so has part: feature:20173-20261:-1:exon
so has part: feature:19074-19824:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51415-51714:-1:exon

position:51415:-1
position: 51415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:49035-49196:-1:exon

position:49035:-1
position: 49035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49196:-1
position: 49196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:45670-45833:-1:exon

position:45670:-1
position: 45670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45833:-1
position: 45833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:42081-42188:-1:exon

position:42081:-1
position: 42081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42188:-1
position: 42188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:40848-40963:-1:exon

position:40848:-1
position: 40848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40963:-1
position: 40963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:40054-40227:-1:exon

position:40054:-1
position: 40054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40227:-1
position: 40227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:37612-37784:-1:exon

position:37612:-1
position: 37612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37784:-1
position: 37784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:37071-37138:-1:exon

position:37071:-1
position: 37071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37138:-1
position: 37138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:32162-32236:-1:exon

position:32162:-1
position: 32162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32236:-1
position: 32236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:31782-31846:-1:exon

position:31782:-1
position: 31782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31846:-1
position: 31846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:31138-31307:-1:exon

position:31138:-1
position: 31138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31307:-1
position: 31307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:29579-29715:-1:exon

position:29579:-1
position: 29579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29715:-1
position: 29715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:29035-29138:-1:exon

position:29035:-1
position: 29035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29138:-1
position: 29138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:28121-28245:-1:exon

position:28121:-1
position: 28121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28245:-1
position: 28245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:26083-26283:-1:exon

position:26083:-1
position: 26083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26283:-1
position: 26283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:23672-23790:-1:exon

position:23672:-1
position: 23672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23790:-1
position: 23790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:23015-23143:-1:exon

position:23015:-1
position: 23015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23143:-1
position: 23143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:21361-21535:-1:exon

position:21361:-1
position: 21361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21535:-1
position: 21535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:20173-20261:-1:exon

position:20173:-1
position: 20173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20261:-1
position: 20261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:19074-19824:-1:exon

position:19824:-1
position: 19824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MSH4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: MSH4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mutS protein homolog 4
translation: MSRGGSETNAYGRAVVSAASGSYTGRCSSTSGLGGRVEEPPRYTLGLLQTPRSAADSTGDLSSGGARPGSSSGAGLAASSSRVKLPVPGRGESYLGDRSSCAENGSMLNFTSSSAQGLNSTRIGKLPLSASRSVCRSRTPHMGYSVTSSSAVSAHTTASVIVAVVEGRGLARGEVGMASIDLKNPEVILSQFADNTTYAKVITKLKILTPLEIIMPNTACDAGNTKLFGLITEHFKNVTFTTVQRKYFNETKGLEYIEQLCASEFSTIFMEVQSKYYCLAAAAALLKYVEFIQNSVYAPKSLKVHFQGSEKTAMIDSSSAQNLELVTNNRDSRNGHTLFGVLNYTKTPGGSRRLRSNILEPLVDAETINTRLDCVQELLQDEELFFGLQAVISKFLDTEQLLSVLVQIPKQDTVKTAESKITNLIYLKHTLELVEPLKAALRNCNTPLLKAYYSSLEDRRFGIILEKITTVINDDTRYTKGCLSMRTQKCYAVKPNINEFLDIARRTYTEIVDDIAGMITQLAEKYNLPMKTSFSSARGFFIQMNADCSMLPSGQLPSEFTKITKMKNTYSFTSADLIKMNERCQESLREIYHMTYLIVCKLLNEIYEHIHCLYKLSDIVSMLDMLLSFAHVCTVSDYVRPEFTDTLAIKQGWHPILEKIAMEKPVSNNTYLTEGSNFLIITGPNMSGKSTYLKQIALCQIMAQIGSYVPAEYCSFRIAEQIFTRIGMDDDIETNASTFMKEMKEITYIIQNANDKSLIIIDELGRGTSAEEGIGICYAACEYLLNLKAFTLFATHFLELCHIDALYPNVENYHFEVQHVRSSAIKKEKIAYTYMLSKGYTEEKNYGLKAAEVSSLPPSIILDAKEITNHIAKQILHQQKSTPEMMKHRAVYHLAMRLVQTARNSRLDSDSLRIYLKGLKKKYKASCPAAERNDEQQ
SIO_010081: MSH4
subclass of: SO_0000673
so part of: MSH4
location: complement(join(19639..19824,20173..20261,21361..21535,23015..23143,23672..23790,26083..26283,28121..28245,29035..29138,29579..29715,31138..31307,31782..31846,32162..32236,37071..37138,37612..37784,40054..40227,40848..40963,42081..42188,45670..45833,49035..49196,51415..51688))
location: region:19639-51688:-1
so has part: feature:51415-51688:-1:exon
so has part: feature:49035-49196:-1:exon
so has part: feature:45670-45833:-1:exon
so has part: feature:42081-42188:-1:exon
so has part: feature:40848-40963:-1:exon
so has part: feature:40054-40227:-1:exon
so has part: feature:37612-37784:-1:exon
so has part: feature:37071-37138:-1:exon
so has part: feature:32162-32236:-1:exon
so has part: feature:31782-31846:-1:exon
so has part: feature:31138-31307:-1:exon
so has part: feature:29579-29715:-1:exon
so has part: feature:29035-29138:-1:exon
so has part: feature:28121-28245:-1:exon
so has part: feature:26083-26283:-1:exon
so has part: feature:23672-23790:-1:exon
so has part: feature:23015-23143:-1:exon
so has part: feature:21361-21535:-1:exon
so has part: feature:20173-20261:-1:exon
so has part: feature:19639-19824:-1:exon

XP_032048706.1
type: Protein
SIO_000068: ncbiprotein

position:19639:-1
position: 19639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51688:-1
position: 51688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51415-51688:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49035-49196:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45670-45833:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:42081-42188:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:40848-40963:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:40054-40227:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:37612-37784:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:37071-37138:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:32162-32236:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:31782-31846:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:31138-31307:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:29579-29715:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:29035-29138:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:28121-28245:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:26083-26283:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:23672-23790:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:23015-23143:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:21361-21535:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:20173-20261:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:19639-19824:-1:exon

RABGGTB
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: RABGGTB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(52832..65188)
location: region:52832-65188:-1
so has part: feature:52832-65188:-1:exon
subclass of: SO_0000010

116491774
type: Gene
SIO_000068: ncbigene

position:52832:-1
position: 52832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65188:-1
position: 65188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52832-65188:-1:exon

RABGGTB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: RABGGTB
product: Rab geranylgeranyltransferase subunit beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032192051.1
SIO_010081: RABGGTB
subclass of: SO_0000673
so part of: RABGGTB
location: complement(join(52832..54991,57502..57651,58391..58516,58870..58980,59099..59151,60433..60538,63209..63406,64434..64541,65165..65188))
location: region:52832-65188:-1
so has part: feature:65165-65188:-1:exon
so has part: feature:64434-64541:-1:exon
so has part: feature:63209-63406:-1:exon
so has part: feature:60433-60538:-1:exon
so has part: feature:59099-59151:-1:exon
so has part: feature:58870-58980:-1:exon
so has part: feature:58391-58516:-1:exon
so has part: feature:57502-57651:-1:exon
so has part: feature:52832-54991:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65165-65188:-1:exon

position:65165:-1
position: 65165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:64434-64541:-1:exon

position:64434:-1
position: 64434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64541:-1
position: 64541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:63209-63406:-1:exon

position:63209:-1
position: 63209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63406:-1
position: 63406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:60433-60538:-1:exon

position:60433:-1
position: 60433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60538:-1
position: 60538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:59099-59151:-1:exon

position:59099:-1
position: 59099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59151:-1
position: 59151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:58870-58980:-1:exon

position:58870:-1
position: 58870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58980:-1
position: 58980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:58391-58516:-1:exon

position:58391:-1
position: 58391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58516:-1
position: 58516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:57502-57651:-1:exon

position:57502:-1
position: 57502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57651:-1
position: 57651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:52832-54991:-1:exon

position:54991:-1
position: 54991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RABGGTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: RABGGTB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: geranylgeranyl transferase type-2 subunit beta
translation: MGTPQKDVVIKPDAPSTLLWEKHADYIASYGTKKDDYEYCMSEYLRMSGVYWGLTAMDLMGQLHRMNKEEILDFIKSCQHECGGISASIGHDPHLLYTLSAVQILILYDSLHVVDVNKIVEYIQNLQKEDGSFAGDKWGEIDTRFSFCAAATLALLGKLDTIDVGKAVEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITDQLHQINADLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKMIGRLHWIDREKLRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIKAVNPVFCMPEDVLRRINVQPELVS
SIO_010081: RABGGTB
subclass of: SO_0000673
so part of: RABGGTB
location: complement(join(54851..54991,57502..57651,58391..58516,58870..58980,59099..59151,60433..60538,63209..63406,64434..64541,65165..65167))
location: region:54851-65167:-1
so has part: feature:65165-65167:-1:exon
so has part: feature:64434-64541:-1:exon
so has part: feature:63209-63406:-1:exon
so has part: feature:60433-60538:-1:exon
so has part: feature:59099-59151:-1:exon
so has part: feature:58870-58980:-1:exon
so has part: feature:58391-58516:-1:exon
so has part: feature:57502-57651:-1:exon
so has part: feature:54851-54991:-1:exon

XP_032047942.1
type: Protein
SIO_000068: ncbiprotein

position:54851:-1
position: 54851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65167:-1
position: 65167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65165-65167:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:64434-64541:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:63209-63406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:60433-60538:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59099-59151:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:58870-58980:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:58391-58516:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:57502-57651:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:54851-54991:-1:exon

LOC116492258
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116492258
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(62128..62212)
location: region:62128-62212:-1
so has part: feature:62128-62212:-1:exon
subclass of: SO_0000578

116492258
type: Gene
SIO_000068: ncbigene

position:62128:-1
position: 62128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62212:-1
position: 62212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62128-62212:-1:exon

LOC116492258
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: snoRNA
gene: LOC116492258
product: small nucleolar RNA SNORD45
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00279
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004253569.1
SIO_010081: LOC116492258
subclass of: SO_0000673
so part of: LOC116492258
location: complement(62128..62212)
location: region:62128-62212:-1
so has part: feature:62128-62212:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62128-62212:-1:exon

LOC116492260
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116492260
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(64190..64272)
location: region:64190-64272:-1
so has part: feature:64190-64272:-1:exon
subclass of: SO_0000578

116492260
type: Gene
SIO_000068: ncbigene

position:64190:-1
position: 64190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64272:-1
position: 64272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64190-64272:-1:exon

LOC116492260
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 219594
nc RNA class: snoRNA
gene: LOC116492260
product: small nucleolar RNA SNORD45
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00279
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004253571.1
SIO_010081: LOC116492260
subclass of: SO_0000673
so part of: LOC116492260
location: complement(64190..64272)
location: region:64190-64272:-1
so has part: feature:64190-64272:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64190-64272:-1:exon

SLC44A5
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: SLC44A5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 75731..162562
location: region:75731-162562:1
so has part: feature:75731-162562:1:exon
subclass of: SO_0000010

116491955
type: Gene
SIO_000068: ncbigene

position:75731:1
position: 75731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162562:1
position: 162562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75731-162562:1:exon

SLC44A5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SLC44A5
product: solute carrier family 44 member 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032192327.1
SIO_010081: SLC44A5
subclass of: SO_0000673
so part of: SLC44A5
location: join(75731..75911,116594..116642,121144..121217,125820..125904,129564..129648,133401..133529,134317..134377,136008..136131,137335..137418,139289..139401,139861..139992,141712..141811,146764..146856,147822..147909,149113..149375,152854..152948,153347..153450,154744..154817,156655..156725,158396..158484,159136..159220,161559..162562)
location: region:75731-162562:1
so has part: feature:75731-75911:1:exon
so has part: feature:116594-116642:1:exon
so has part: feature:121144-121217:1:exon
so has part: feature:125820-125904:1:exon
so has part: feature:129564-129648:1:exon
so has part: feature:133401-133529:1:exon
so has part: feature:134317-134377:1:exon
so has part: feature:136008-136131:1:exon
so has part: feature:137335-137418:1:exon
so has part: feature:139289-139401:1:exon
so has part: feature:139861-139992:1:exon
so has part: feature:141712-141811:1:exon
so has part: feature:146764-146856:1:exon
so has part: feature:147822-147909:1:exon
so has part: feature:149113-149375:1:exon
so has part: feature:152854-152948:1:exon
so has part: feature:153347-153450:1:exon
so has part: feature:154744-154817:1:exon
so has part: feature:156655-156725:1:exon
so has part: feature:158396-158484:1:exon
so has part: feature:159136-159220:1:exon
so has part: feature:161559-162562:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:75731-75911:1:exon

position:75911:1
position: 75911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:116594-116642:1:exon

position:116594:1
position: 116594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116642:1
position: 116642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:121144-121217:1:exon

position:121144:1
position: 121144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121217:1
position: 121217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:125820-125904:1:exon

position:125820:1
position: 125820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125904:1
position: 125904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:129564-129648:1:exon

position:129564:1
position: 129564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129648:1
position: 129648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:133401-133529:1:exon

position:133401:1
position: 133401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133529:1
position: 133529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:134317-134377:1:exon

position:134317:1
position: 134317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134377:1
position: 134377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:136008-136131:1:exon

position:136008:1
position: 136008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136131:1
position: 136131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:137335-137418:1:exon

position:137335:1
position: 137335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137418:1
position: 137418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:139289-139401:1:exon

position:139289:1
position: 139289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139401:1
position: 139401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:139861-139992:1:exon

position:139861:1
position: 139861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139992:1
position: 139992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:141712-141811:1:exon

position:141712:1
position: 141712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141811:1
position: 141811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:146764-146856:1:exon

position:146764:1
position: 146764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146856:1
position: 146856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:147822-147909:1:exon

position:147822:1
position: 147822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147909:1
position: 147909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:149113-149375:1:exon

position:149113:1
position: 149113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149375:1
position: 149375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:152854-152948:1:exon

position:152854:1
position: 152854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152948:1
position: 152948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:153347-153450:1:exon

position:153347:1
position: 153347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153450:1
position: 153450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:154744-154817:1:exon

position:154744:1
position: 154744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154817:1
position: 154817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:156655-156725:1:exon

position:156655:1
position: 156655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156725:1
position: 156725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:158396-158484:1:exon

position:158396:1
position: 158396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158484:1
position: 158484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:159136-159220:1:exon

position:159136:1
position: 159136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159220:1
position: 159220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:161559-162562:1:exon

position:161559:1
position: 161559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC44A5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SLC44A5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: choline transporter-like protein 5
translation: MARKGEASAPPYGEPRKFDPKFRGPIHNRHCTDIICCVIFIVVILGYIALGIVAWVHGDPRKVIYPTDSYGQFCGQKDTFNENKTILFYFNILKCASPVVLINLQCPTTQLCVSKCPDRFATYIDVQASYRYKPDQWNYFKQFCKPGFNNPRKSVAQVLRDEDCPSMIIPSRPFLKRCFPDFSTKNGVLTVANQTTFRDGRGKTRNVTDLREAANGINNVLDARSVGMKIFEDYAISWYWILIGLFIAMIVSLLFLVLLRFTAGVLFWIFIFGVIGIIGYGIWHCYWEYDHLKGIPGSDLTVYDIGFQTDFRVYLQLRQTWLAFMIILCVVEVIIILMLIFLRNRIRIAIALLKEGSRAIGYIMSTLFYPIVTFILIAICISYWAVTAVFLATSGEPVYKVMANQTLCKYANLTCDPETFNTTNVTKLCPGAQCTFAFYGGESLYHKYIFIFQLANAFVFLWLVNFAIALGQCTLAGAFASYYWASRKPADIPLWPLFSSFGRAIRYHTGSLAFGALILAIVQLIRVILEYLDHKLKGTQNSFTRFLLCCLKCCFWCLEKFLKFINRNAYIMIAIYGKNFCTSAKEAFFLLMRNVVRVAVLDKVTDFLLFLGKILVAGGVGVLAFFFFTQRIPIFAQEAPALNYYWVPLLTVIIGSYLVAHGFFSVYAMCVDTLFLCFCEDLERNDGSTAKPYFMSASLHRILGKKELSPKKAVG
SIO_010081: SLC44A5
subclass of: SO_0000673
so part of: SLC44A5
location: join(75875..75911,116594..116642,121144..121217,125820..125904,129564..129648,133401..133529,134317..134377,136008..136131,137335..137418,139289..139401,139861..139992,141712..141811,146764..146856,147822..147909,149113..149375,152854..152948,153347..153450,154744..154817,156655..156725,158396..158484,159136..159220,161559..161671)
location: region:75875-161671:1
so has part: feature:75875-75911:1:exon
so has part: feature:116594-116642:1:exon
so has part: feature:121144-121217:1:exon
so has part: feature:125820-125904:1:exon
so has part: feature:129564-129648:1:exon
so has part: feature:133401-133529:1:exon
so has part: feature:134317-134377:1:exon
so has part: feature:136008-136131:1:exon
so has part: feature:137335-137418:1:exon
so has part: feature:139289-139401:1:exon
so has part: feature:139861-139992:1:exon
so has part: feature:141712-141811:1:exon
so has part: feature:146764-146856:1:exon
so has part: feature:147822-147909:1:exon
so has part: feature:149113-149375:1:exon
so has part: feature:152854-152948:1:exon
so has part: feature:153347-153450:1:exon
so has part: feature:154744-154817:1:exon
so has part: feature:156655-156725:1:exon
so has part: feature:158396-158484:1:exon
so has part: feature:159136-159220:1:exon
so has part: feature:161559-161671:1:exon

XP_032048218.1
type: Protein
SIO_000068: ncbiprotein

position:75875:1
position: 75875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161671:1
position: 161671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75875-75911:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:116594-116642:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:121144-121217:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:125820-125904:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:129564-129648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:133401-133529:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:134317-134377:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:136008-136131:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:137335-137418:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:139289-139401:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:139861-139992:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:141712-141811:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:146764-146856:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:147822-147909:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:149113-149375:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:152854-152948:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:153347-153450:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:154744-154817:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:156655-156725:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:158396-158484:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:159136-159220:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:161559-161671:1:exon

LHX8
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LHX8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(183963..195572)
location: region:183963-195572:-1
so has part: feature:183963-195572:-1:exon
subclass of: SO_0000010

116492148
type: Gene
SIO_000068: ncbigene

position:183963:-1
position: 183963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195572:-1
position: 195572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183963-195572:-1:exon

LHX8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LHX8
product: LIM homeobox 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032192661.1
SIO_010081: LHX8
subclass of: SO_0000673
so part of: LHX8
location: complement(join(183963..184039,184889..185072,186222..186317,189322..189425,189895..190115,191662..191783,194983..195141,195492..195572))
location: region:183963-195572:-1
so has part: feature:195492-195572:-1:exon
so has part: feature:194983-195141:-1:exon
so has part: feature:191662-191783:-1:exon
so has part: feature:189895-190115:-1:exon
so has part: feature:189322-189425:-1:exon
so has part: feature:186222-186317:-1:exon
so has part: feature:184889-185072:-1:exon
so has part: feature:183963-184039:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:195492-195572:-1:exon

position:195492:-1
position: 195492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:194983-195141:-1:exon

position:194983:-1
position: 194983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195141:-1
position: 195141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:191662-191783:-1:exon

position:191662:-1
position: 191662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191783:-1
position: 191783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:189895-190115:-1:exon

position:189895:-1
position: 189895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190115:-1
position: 190115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:189322-189425:-1:exon

position:189322:-1
position: 189322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189425:-1
position: 189425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:186222-186317:-1:exon

position:186222:-1
position: 186222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186317:-1
position: 186317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:184889-185072:-1:exon

position:184889:-1
position: 184889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185072:-1
position: 185072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:183963-184039:-1:exon

position:184039:-1
position: 184039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LHX8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LHX8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM/homeobox protein Lhx8
translation: MYWKSDPMFVCRLDDKDLPALGGPSEKASPAAADEDSCSSSAALSPSSSPRSMASGSGCAPNKCVCSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYFRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYDCMLDNLKREVENGNGINVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHVSPNHSSTAPVTAVQPSRLSPPMLEEMAYSAYVPQDGTMLTALHSYMDAHSPTALGLQPLLPHSMTQLPISHT
SIO_010081: LHX8
subclass of: SO_0000673
so part of: LHX8
location: complement(join(183963..184039,184889..185072,186222..186317,189322..189425,189895..190115,191662..191783,194983..195141,195492..195572))
location: region:183963-195572:-1
so has part: feature:195492-195572:-1:exon
so has part: feature:194983-195141:-1:exon
so has part: feature:191662-191783:-1:exon
so has part: feature:189895-190115:-1:exon
so has part: feature:189322-189425:-1:exon
so has part: feature:186222-186317:-1:exon
so has part: feature:184889-185072:-1:exon
so has part: feature:183963-184039:-1:exon

XP_032048552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195492-195572:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194983-195141:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:191662-191783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:189895-190115:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:189322-189425:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186222-186317:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:184889-185072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:183963-184039:-1:exon

TYW3
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TYW3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(272875..281290)
location: region:272875-281290:-1
so has part: feature:272875-281290:-1:exon
subclass of: SO_0000010

116492068
type: Gene
SIO_000068: ncbigene

position:272875:-1
position: 272875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281290:-1
position: 281290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272875-281290:-1:exon

TYW3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: TYW3
product: tRNA-yW synthesizing protein 3 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032192505.1
SIO_010081: TYW3
subclass of: SO_0000673
so part of: TYW3
location: complement(join(272875..274073,274912..275045,275342..275413,276267..276365,280914..280997,281117..281290))
location: region:272875-281290:-1
so has part: feature:281117-281290:-1:exon
so has part: feature:280914-280997:-1:exon
so has part: feature:276267-276365:-1:exon
so has part: feature:275342-275413:-1:exon
so has part: feature:274912-275045:-1:exon
so has part: feature:272875-274073:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:281117-281290:-1:exon

position:281117:-1
position: 281117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:280914-280997:-1:exon

position:280914:-1
position: 280914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280997:-1
position: 280997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:276267-276365:-1:exon

position:276267:-1
position: 276267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276365:-1
position: 276365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:275342-275413:-1:exon

position:275342:-1
position: 275342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275413:-1
position: 275413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:274912-275045:-1:exon

position:274912:-1
position: 274912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275045:-1
position: 275045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:272875-274073:-1:exon

position:274073:-1
position: 274073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TYW3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: TYW3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA wybutosine-synthesizing protein 3 homolog
translation: MAAFGRWKAQRLARADASRKGALDERAAPVVRLLNAWARFCTTSSCAGRLVLAQGGAAEDAERRGAPKKGCVWLLVTHEPCRRDELMTALEKATGDVVFKFEPFVLHVLCRELQDAQLLHSVAIDSGFKNSGITVGRGGKIMMAVRSTHCLEVPLSHMGKLMVSEEYIEFLIHVANRKMEENTRRIDRFYKCLQLALEADVSANNLHSEETEKYHSVYVHRRKRETIQEQDVHTSPKDHSEELEPEDDPESNLGIFAEIMI
SIO_010081: TYW3
subclass of: SO_0000673
so part of: TYW3
location: complement(join(273851..274073,274912..275045,275342..275413,276267..276365,280914..280997,281117..281290))
location: region:273851-281290:-1
so has part: feature:281117-281290:-1:exon
so has part: feature:280914-280997:-1:exon
so has part: feature:276267-276365:-1:exon
so has part: feature:275342-275413:-1:exon
so has part: feature:274912-275045:-1:exon
so has part: feature:273851-274073:-1:exon

XP_032048396.1
type: Protein
SIO_000068: ncbiprotein

position:273851:-1
position: 273851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281117-281290:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280914-280997:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:276267-276365:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:275342-275413:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:274912-275045:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:273851-274073:-1:exon

CRYZ
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: CRYZ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 281394..289841
location: region:281394-289841:1
so has part: feature:281394-289841:1:exon
subclass of: SO_0000010

116492176
type: Gene
SIO_000068: ncbigene

position:281394:1
position: 281394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289841:1
position: 289841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281394-289841:1:exon

CRYZ
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: CRYZ
product: crystallin zeta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032192721.1
SIO_010081: CRYZ
subclass of: SO_0000673
so part of: CRYZ
location: join(281394..281452,282907..283031,283394..283546,285063..285226,286051..286102,287522..287671,288093..288194,288289..288384,288665..289841)
location: region:281394-289841:1
so has part: feature:281394-281452:1:exon
so has part: feature:282907-283031:1:exon
so has part: feature:283394-283546:1:exon
so has part: feature:285063-285226:1:exon
so has part: feature:286051-286102:1:exon
so has part: feature:287522-287671:1:exon
so has part: feature:288093-288194:1:exon
so has part: feature:288289-288384:1:exon
so has part: feature:288665-289841:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:281394-281452:1:exon

position:281452:1
position: 281452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:282907-283031:1:exon

position:282907:1
position: 282907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283031:1
position: 283031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:283394-283546:1:exon

position:283394:1
position: 283394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283546:1
position: 283546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:285063-285226:1:exon

position:285063:1
position: 285063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285226:1
position: 285226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:286051-286102:1:exon

position:286051:1
position: 286051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286102:1
position: 286102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:287522-287671:1:exon

position:287522:1
position: 287522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287671:1
position: 287671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:288093-288194:1:exon

position:288093:1
position: 288093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288194:1
position: 288194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:288289-288384:1:exon

position:288289:1
position: 288289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288384:1
position: 288384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:288665-289841:1:exon

position:288665:1
position: 288665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CRYZ
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: CRYZ
product: crystallin zeta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032192720.1
SIO_010081: CRYZ
subclass of: SO_0000673
so part of: CRYZ
location: join(281656..281761,282907..283031,283394..283546,285063..285226,286051..286102,287522..287671,288093..288194,288289..288384,288665..289841)
location: region:281656-289841:1
so has part: feature:281656-281761:1:exon
so has part: feature:282907-283031:1:exon
so has part: feature:283394-283546:1:exon
so has part: feature:285063-285226:1:exon
so has part: feature:286051-286102:1:exon
so has part: feature:287522-287671:1:exon
so has part: feature:288093-288194:1:exon
so has part: feature:288289-288384:1:exon
so has part: feature:288665-289841:1:exon

position:281656:1
position: 281656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281656-281761:1:exon

position:281761:1
position: 281761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:282907-283031:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283394-283546:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:285063-285226:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:286051-286102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:287522-287671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:288093-288194:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:288289-288384:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:288665-289841:1:exon

CRYZ
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: CRYZ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: quinone oxidoreductase
translation: MAMATTRNVMRAVRVFEFGGPEVLKLQSDVLIPVPKENQVLIKVHACGVNPVETYIRSGNYARKPALPYTPGTDVSGVIESVGEHVTTFKKGDKVFSIDTISGGYADYALAAANRVFPLSDKLDFKQGAAIGIPYFTAYRALFQKGHAKAGESVLVHGASGGVGIAACQIARACGLKVLGTAGTEEGMNIVLRNGAHQVFNHREANYIDKIKEYTKMQGVDIIIEMLSNINLATDLHLLSYAGRVMVVGCRGTIEINPRDTMSKESSIIGVGLFLATEEERHECATALLDGIEAGWLKPIVGSEYPLEKVIKAHEDIIHSSGARGKMVLLP
SIO_010081: CRYZ
subclass of: SO_0000673
so part of: CRYZ
location: join(282915..283031,283394..283546,285063..285226,286051..286102,287522..287671,288093..288194,288289..288384,288665..288826)
location: region:282915-288826:1
so has part: feature:282915-283031:1:exon
so has part: feature:283394-283546:1:exon
so has part: feature:285063-285226:1:exon
so has part: feature:286051-286102:1:exon
so has part: feature:287522-287671:1:exon
so has part: feature:288093-288194:1:exon
so has part: feature:288289-288384:1:exon
so has part: feature:288665-288826:1:exon

XP_032048611.1
type: Protein
SIO_000068: ncbiprotein

position:282915:1
position: 282915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288826:1
position: 288826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282915-283031:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:283394-283546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:285063-285226:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:286051-286102:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:287522-287671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:288093-288194:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:288289-288384:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:288665-288826:1:exon

CRYZ
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: CRYZ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: quinone oxidoreductase
translation: MAMATTRNVMRAVRVFEFGGPEVLKLQSDVLIPVPKENQVLIKVHACGVNPVETYIRSGNYARKPALPYTPGTDVSGVIESVGEHVTTFKKGDKVFSIDTISGGYADYALAAANRVFPLSDKLDFKQGAAIGIPYFTAYRALFQKGHAKAGESVLVHGASGGVGIAACQIARACGLKVLGTAGTEEGMNIVLRNGAHQVFNHREANYIDKIKEYTKMQGVDIIIEMLSNINLATDLHLLSYAGRVMVVGCRGTIEINPRDTMSKESSIIGVGLFLATEEERHECATALLDGIEAGWLKPIVGSEYPLEKVIKAHEDIIHSSGARGKMVLLP
SIO_010081: CRYZ
subclass of: SO_0000673
so part of: CRYZ
location: join(282915..283031,283394..283546,285063..285226,286051..286102,287522..287671,288093..288194,288289..288384,288665..288826)
location: region:282915-288826:1
so has part: feature:282915-283031:1:exon
so has part: feature:283394-283546:1:exon
so has part: feature:285063-285226:1:exon
so has part: feature:286051-286102:1:exon
so has part: feature:287522-287671:1:exon
so has part: feature:288093-288194:1:exon
so has part: feature:288289-288384:1:exon
so has part: feature:288665-288826:1:exon

XP_032048612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:282915-283031:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:283394-283546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:285063-285226:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:286051-286102:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:287522-287671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:288093-288194:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:288289-288384:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:288665-288826:1:exon

ERICH3
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: ERICH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 291794..326880
location: region:291794-326880:1
so has part: feature:291794-326880:1:exon
subclass of: SO_0000010

116491852
type: Gene
SIO_000068: ncbigene

position:291794:1
position: 291794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326880:1
position: 326880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291794-326880:1:exon

ERICH3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ERICH3
product: glutamate rich 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032192210.1
SIO_010081: ERICH3
subclass of: SO_0000673
so part of: ERICH3
location: join(291794..291833,301767..301860,303393..303518,304394..304468,306293..306421,307108..307188,307687..307842,309496..309714,310127..310307,311655..311841,313827..314125,316259..316474,317829..318332,323609..325434,325963..326880)
location: region:291794-326880:1
so has part: feature:291794-291833:1:exon
so has part: feature:301767-301860:1:exon
so has part: feature:303393-303518:1:exon
so has part: feature:304394-304468:1:exon
so has part: feature:306293-306421:1:exon
so has part: feature:307108-307188:1:exon
so has part: feature:307687-307842:1:exon
so has part: feature:309496-309714:1:exon
so has part: feature:310127-310307:1:exon
so has part: feature:311655-311841:1:exon
so has part: feature:313827-314125:1:exon
so has part: feature:316259-316474:1:exon
so has part: feature:317829-318332:1:exon
so has part: feature:323609-325434:1:exon
so has part: feature:325963-326880:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291794-291833:1:exon

position:291833:1
position: 291833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:301767-301860:1:exon

position:301767:1
position: 301767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301860:1
position: 301860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:303393-303518:1:exon

position:303393:1
position: 303393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303518:1
position: 303518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:304394-304468:1:exon

position:304394:1
position: 304394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304468:1
position: 304468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:306293-306421:1:exon

position:306293:1
position: 306293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306421:1
position: 306421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:307108-307188:1:exon

position:307108:1
position: 307108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307188:1
position: 307188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:307687-307842:1:exon

position:307687:1
position: 307687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307842:1
position: 307842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:309496-309714:1:exon

position:309496:1
position: 309496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309714:1
position: 309714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:310127-310307:1:exon

position:310127:1
position: 310127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310307:1
position: 310307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:311655-311841:1:exon

position:311655:1
position: 311655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311841:1
position: 311841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:313827-314125:1:exon

position:313827:1
position: 313827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314125:1
position: 314125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:316259-316474:1:exon

position:316259:1
position: 316259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316474:1
position: 316474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:317829-318332:1:exon

position:317829:1
position: 317829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318332:1
position: 318332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:323609-325434:1:exon

position:323609:1
position: 323609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325434:1
position: 325434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:325963-326880:1:exon

position:325963:1
position: 325963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ERICH3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: ERICH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate-rich protein 3
translation: MSDPRPGFLATYNSLTDKHLAGYFSNTRIRRHLQRSGLISRSGRIIPEKEYRLNAMRRDHQKYVQECLARAIFLKVLDMERHHQLEIKRKLENSMRKERVLQKNKVERSRRSVEGASPVHSLHPPVGPRSHYGLHPLVAGEPASHSQMRAPGLADYSGGHPSYQHRFKESSFFKITSCRPHTAPGNMQHPLRLQPLHSSAVVGSVPKTSGSKQKCHMLENDQQLASGGEKTELRLMNSMEYVTGKSPYRLPVINNYVMPVPPPPLQKGDKSVKATRNGMPRGRRFRPPHTPNGLEQLLTKNSGGLPKPSLRSNAFITMIFLGKSVHLSHDDADYKDEVKVCQQHCGGENLCVYKGKLLEGETFQFVSKRHHGFPFSLTFFLNGMQVDRLSSCCEYKHQKRSRLGGRHGYFGFLNVEGASPCYRCIIAMGLDKKPSPPKRKMEKDYEEKQVGSWKGGAHSEPSDSSVEQKSSKDLVLVILPGHEASMETIEEKMETGQEHRGEERKKLLNHETEDSQEDTGKNDYDEDFEAEVNEEGQTSDQRNGMSKSSPDDEEHNLDYEKESENSSQKALQASVSERDESDGYSDSDLEDDKQDRRSAHSLSSTSAQYSSGDDSDVQKMIENVKGKEEYDIKKASDNTAHAQYRSENGENKLFKTEDNQETFTLEKEAIHEAEKTKVQDLPAGEDTEIFHENITSIQHQSPEVNWELRQAGTVESNIKEGGEKNASNKRDSGEKDVLVPLENNMMELENRNEEFPQSDEGSAPDGAFLAEGTRAPDVQKAAEQEARGKQVAGQRQALVEEGRVAEEGDSHADGARRGAARAGDVLPKGEVVAVVPTAGQLAVERVAPAGGATAEGDAKEKETGKGVPGAEVVAGGQKAVTRVMESVGALQEPGSKGEESAGVGGLARREADGAVSGCGEGAGELSGGGEAMEKASGVEKAVGVAEPLLKEAVSDTMSEAEEAAEEGRFAGKGIVEDAVCEGEEAVEDANLAEEEITGVAGLEGAEAVEEAISEGEEAVEKRVALRETLGDTEVCTGREELKPNEFTQLKASGEEKAEMKDAAIGIATSETDRPPEVEERSLPRAEEVVEESVDARKGPVLQAASGLGALVEAGRDPASEGSSLLEQTATAEDEEGSAEALLLENPSLGSKAKADGVMEENLDGPVMGLSAEIDGAEIGGGGVMGGVAGPWELEAAEQGLRECATGQDGVVLGAGRTPGEEVVEEPALPSEGLCESRAGEAAGTAVRKAENGGGPEPVGGAVGLEVAVAGDGWMGDGVGAWERGTRAGAGGQSRMGVAVAEGPAVQGETVQAGAHIEGKESGFSESAQKGKAEGVSEDTQGDSGAQEQRKESPMRGSPDAGAAATDGSCCEDAVNLDAAVVPSIGPQDKEETVL
SIO_010081: ERICH3
subclass of: SO_0000673
so part of: ERICH3
location: join(291814..291833,301767..301860,303393..303518,304394..304468,306293..306421,307108..307188,307687..307842,309496..309714,310127..310307,311655..311841,313827..314125,316259..316474,317829..318332,323609..325434,325963..326034)
location: region:291814-326034:1
so has part: feature:291814-291833:1:exon
so has part: feature:301767-301860:1:exon
so has part: feature:303393-303518:1:exon
so has part: feature:304394-304468:1:exon
so has part: feature:306293-306421:1:exon
so has part: feature:307108-307188:1:exon
so has part: feature:307687-307842:1:exon
so has part: feature:309496-309714:1:exon
so has part: feature:310127-310307:1:exon
so has part: feature:311655-311841:1:exon
so has part: feature:313827-314125:1:exon
so has part: feature:316259-316474:1:exon
so has part: feature:317829-318332:1:exon
so has part: feature:323609-325434:1:exon
so has part: feature:325963-326034:1:exon

XP_032048101.1
type: Protein
SIO_000068: ncbiprotein

position:291814:1
position: 291814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326034:1
position: 326034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291814-291833:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301767-301860:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:303393-303518:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:304394-304468:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:306293-306421:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307108-307188:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307687-307842:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:309496-309714:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:310127-310307:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:311655-311841:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:313827-314125:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:316259-316474:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:317829-318332:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:323609-325434:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:325963-326034:1:exon

LOC116492190
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116492190
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(330242..388627)
location: region:330242-388627:-1
so has part: feature:330242-388627:-1:exon
subclass of: SO_0000010

116492190
type: Gene
SIO_000068: ncbigene

position:330242:-1
position: 330242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388627:-1
position: 388627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330242-388627:-1:exon

LOC116492190
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116492190
product: serine/threonine-protein kinase TNNI3K
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 15% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032192742.1
SIO_010081: LOC116492190
subclass of: SO_0000673
so part of: LOC116492190
location: complement(join(330242..330400,334562..334641,337725..337894,340051..340110,346613..346722,350314..350446,351634..351686,353101..353153,368694..368798,369156..369350,369461..369518,369608..369700,370664..370720,372416..372502,374970..375119,375768..375862,376484..376588,376680..376824,377103..377241,378315..378413,382311..382421,383724..383821,385361..385446,387874..387982,388588..388627))
location: region:330242-388627:-1
so has part: feature:388588-388627:-1:exon
so has part: feature:387874-387982:-1:exon
so has part: feature:385361-385446:-1:exon
so has part: feature:383724-383821:-1:exon
so has part: feature:382311-382421:-1:exon
so has part: feature:378315-378413:-1:exon
so has part: feature:377103-377241:-1:exon
so has part: feature:376680-376824:-1:exon
so has part: feature:376484-376588:-1:exon
so has part: feature:375768-375862:-1:exon
so has part: feature:374970-375119:-1:exon
so has part: feature:372416-372502:-1:exon
so has part: feature:370664-370720:-1:exon
so has part: feature:369608-369700:-1:exon
so has part: feature:369461-369518:-1:exon
so has part: feature:369156-369350:-1:exon
so has part: feature:368694-368798:-1:exon
so has part: feature:353101-353153:-1:exon
so has part: feature:351634-351686:-1:exon
so has part: feature:350314-350446:-1:exon
so has part: feature:346613-346722:-1:exon
so has part: feature:340051-340110:-1:exon
so has part: feature:337725-337894:-1:exon
so has part: feature:334562-334641:-1:exon
so has part: feature:330242-330400:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:388588-388627:-1:exon

position:388588:-1
position: 388588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:387874-387982:-1:exon

position:387874:-1
position: 387874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387982:-1
position: 387982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:385361-385446:-1:exon

position:385361:-1
position: 385361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385446:-1
position: 385446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:383724-383821:-1:exon

position:383724:-1
position: 383724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383821:-1
position: 383821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:382311-382421:-1:exon

position:382311:-1
position: 382311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382421:-1
position: 382421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:378315-378413:-1:exon

position:378315:-1
position: 378315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378413:-1
position: 378413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:377103-377241:-1:exon

position:377103:-1
position: 377103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377241:-1
position: 377241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:376680-376824:-1:exon

position:376680:-1
position: 376680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376824:-1
position: 376824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:376484-376588:-1:exon

position:376484:-1
position: 376484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376588:-1
position: 376588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:375768-375862:-1:exon

position:375768:-1
position: 375768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375862:-1
position: 375862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:374970-375119:-1:exon

position:374970:-1
position: 374970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375119:-1
position: 375119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:372416-372502:-1:exon

position:372416:-1
position: 372416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372502:-1
position: 372502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:370664-370720:-1:exon

position:370664:-1
position: 370664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370720:-1
position: 370720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:369608-369700:-1:exon

position:369608:-1
position: 369608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369700:-1
position: 369700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:369461-369518:-1:exon

position:369461:-1
position: 369461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369518:-1
position: 369518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:369156-369350:-1:exon

position:369156:-1
position: 369156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369350:-1
position: 369350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:368694-368798:-1:exon

position:368694:-1
position: 368694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368798:-1
position: 368798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:353101-353153:-1:exon

position:353101:-1
position: 353101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353153:-1
position: 353153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:351634-351686:-1:exon

position:351634:-1
position: 351634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351686:-1
position: 351686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:350314-350446:-1:exon

position:350314:-1
position: 350314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350446:-1
position: 350446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:346613-346722:-1:exon

position:346613:-1
position: 346613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346722:-1
position: 346722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:340051-340110:-1:exon

position:340051:-1
position: 340051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340110:-1
position: 340110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:337725-337894:-1:exon

position:337725:-1
position: 337725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337894:-1
position: 337894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:334562-334641:-1:exon

position:334562:-1
position: 334562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334641:-1
position: 334641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:330242-330400:-1:exon

position:330400:-1
position: 330400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116492190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116492190
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase TNNI3K
translation: MGNYKSRPTQTCTDEWKKKVSESYAIIIERLEDDLQIKEKELAELKHVFSSDEAFCKVNLNYRTENGLSLLHLCCICGGNKSHIRTLMLKGLRPSRLTRNGFTALHLAAYKDNAELVTALLHGGADIQQVGYGALTALHIATIAGHHEAVDILLQHGAYVNVQDAVFFTPLHIAAYYGHEQVTHLLLKFGADVNASGEVGDRPLHLASAKGFLNITKLLMEEGSKADVNAQDNEDHVPLHFCCRFGHHEIVKFLLQSSFEVQPHVVNIYGDTPLHLACYNGKFEVVKEIIQLSGTESLTKENIFSETAFHSACTYGKNIELVKFLLDQNVVSINHQGRDGHTGLHCACYHGHIRLVQFLLDNGADMNLVACDPSRSSGEKDEQTCLMWAYEKGHDAIVTLLKHYKRPQDESPCNEYSQPGGDGSYVSVPSPLGKIKSMTKEKADVLLLRAGLPSHFHLQLSEIEFHEIIGSGSFGKVYKGRCRNKIVAIKRYRANTYCSKSDVDMFCREVSILCRLNHPCVIQFVGACLDDPSQFAIVTQYISGGSLFSLLHEQKRTLDLQSKLIIAVDVAKGMEYLHNLTQPIIHRDLNSHNILLYEDGHAVVADFGESRFLQSLDEDNMTKQPGNLRWMAPEVFTQCTRYTIKADVFSYALCLWELLTGEIPFAHLKPAAAAADMAYHHIRPPIGYSIPKPISALLMRGWNACPEGRPEFSEVVTKLEECLCNIELMSPASSNSSGSLSPSSSSDCLVARGGPGRSHVAALRSRFELEYALNARAYAVWSQSTGQHLSQGLSLDDMRRNFQYPPIDKNGYVSDPMSTMRFHSCSSSGSFEESS
SIO_010081: LOC116492190
subclass of: SO_0000673
so part of: LOC116492190
location: complement(join(330324..330400,334562..334641,337725..337894,340051..340110,346613..346722,350314..350446,351634..351686,353101..353153,368694..368798,369156..369350,369461..369518,369608..369700,370664..370720,372416..372502,374970..375119,375768..375862,376484..376588,376680..376824,377103..377241,378315..378413,382311..382421,383724..383821,385361..385446,387874..387982,388588..388627))
location: region:330324-388627:-1
so has part: feature:388588-388627:-1:exon
so has part: feature:387874-387982:-1:exon
so has part: feature:385361-385446:-1:exon
so has part: feature:383724-383821:-1:exon
so has part: feature:382311-382421:-1:exon
so has part: feature:378315-378413:-1:exon
so has part: feature:377103-377241:-1:exon
so has part: feature:376680-376824:-1:exon
so has part: feature:376484-376588:-1:exon
so has part: feature:375768-375862:-1:exon
so has part: feature:374970-375119:-1:exon
so has part: feature:372416-372502:-1:exon
so has part: feature:370664-370720:-1:exon
so has part: feature:369608-369700:-1:exon
so has part: feature:369461-369518:-1:exon
so has part: feature:369156-369350:-1:exon
so has part: feature:368694-368798:-1:exon
so has part: feature:353101-353153:-1:exon
so has part: feature:351634-351686:-1:exon
so has part: feature:350314-350446:-1:exon
so has part: feature:346613-346722:-1:exon
so has part: feature:340051-340110:-1:exon
so has part: feature:337725-337894:-1:exon
so has part: feature:334562-334641:-1:exon
so has part: feature:330324-330400:-1:exon

XP_032048633.1
type: Protein
SIO_000068: ncbiprotein

position:330324:-1
position: 330324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388588-388627:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:387874-387982:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:385361-385446:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:383724-383821:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:382311-382421:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:378315-378413:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:377103-377241:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:376680-376824:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:376484-376588:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:375768-375862:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:374970-375119:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:372416-372502:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:370664-370720:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:369608-369700:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:369461-369518:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:369156-369350:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:368694-368798:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:353101-353153:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:351634-351686:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:350314-350446:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:346613-346722:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:340051-340110:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:337725-337894:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:334562-334641:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:330324-330400:-1:exon

FPGT
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: FPGT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(395943..400070)
location: region:395943-400070:-1
so has part: feature:395943-400070:-1:exon
subclass of: SO_0000010

116491853
type: Gene
SIO_000068: ncbigene

position:395943:-1
position: 395943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400070:-1
position: 400070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395943-400070:-1:exon

FPGT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: FPGT
product: fucose-1-phosphate guanylyltransferase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032192211.1
SIO_010081: FPGT
subclass of: SO_0000673
so part of: FPGT
location: complement(join(395943..397621,398327..398419,399693..399860,399989..400070))
location: region:395943-400070:-1
so has part: feature:399989-400070:-1:exon
so has part: feature:399693-399860:-1:exon
so has part: feature:398327-398419:-1:exon
so has part: feature:395943-397621:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:399989-400070:-1:exon

position:399989:-1
position: 399989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:399693-399860:-1:exon

position:399693:-1
position: 399693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399860:-1
position: 399860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:398327-398419:-1:exon

position:398327:-1
position: 398327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398419:-1
position: 398419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:395943-397621:-1:exon

position:397621:-1
position: 397621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FPGT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: FPGT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fucose-1-phosphate guanylyltransferase
translation: MAAAAGERSAARREATGRRLARFAALRGRAVRHGEFWDLVAITAADAEQERAFRRQLAAKLARGELPRGVRYHVFADPPGPKIGNGGSTLHVLQCLENLYGDKWTSFIVLLIHSGGYSQRLPNASALGKIFTALPLGDPVYQMLELKLAMYIDFPSHMKPGILITCSDDIELYSTGVAETITFDKPGFTALAHPSDLTIGTTHGVFVLDPSSFSGKGGLEYTSCHHFLHKPDIETMRQCGAVRVRRKNCSQPCSSGDHSDSEMDSECVYTDSIFYMDHSIAKQLLVFYKQMDTLCCEIDAYGDFLQALGPGATQDYTKNTSNITKEESQLVEVRQKLYSILKGTPLNVIVLNNSKFYHIGTTQEYLFHFTSDSKLKFELDLLSKAFSIFSDKAETLDRSASIIQSILEPGCLIGPGSVIEYSRIGPEVLVGKNCIISGSYINLRVDIPSNCFLCSLSIKIDDQVKYASMVFSVEDDLKKGVKLLSDIYSLQFFGVSLLECLDLWGVQVSNQLFSSDNTQFGLWTARIFPVCSSLSESVRMSLNMLHSVQHKSAFKLHGFKLLSVEEMLSCKDVEDMLKFRNQIYDEICLQRQKEKSDL
SIO_010081: FPGT
subclass of: SO_0000673
so part of: FPGT
location: complement(join(396168..397621,398327..398419,399693..399860,399989..400070))
location: region:396168-400070:-1
so has part: feature:399989-400070:-1:exon
so has part: feature:399693-399860:-1:exon
so has part: feature:398327-398419:-1:exon
so has part: feature:396168-397621:-1:exon

XP_032048102.1
type: Protein
SIO_000068: ncbiprotein

position:396168:-1
position: 396168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399989-400070:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:399693-399860:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:398327-398419:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:396168-397621:-1:exon

NEGR1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: NEGR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 720379..959110
location: region:720379-959110:1
so has part: feature:720379-959110:1:exon
subclass of: SO_0000010

116491705
type: Gene
SIO_000068: ncbigene

position:720379:1
position: 720379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959110:1
position: 959110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:720379-959110:1:exon

NEGR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: NEGR1
product: neuronal growth regulator 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032191887.1
SIO_010081: NEGR1
subclass of: SO_0000673
so part of: NEGR1
location: join(720379..720548,830294..830526,867200..867325,880969..881100,903527..903647,908576..908727,957895..959110)
location: region:720379-959110:1
so has part: feature:720379-720548:1:exon
so has part: feature:830294-830526:1:exon
so has part: feature:867200-867325:1:exon
so has part: feature:880969-881100:1:exon
so has part: feature:903527-903647:1:exon
so has part: feature:908576-908727:1:exon
so has part: feature:957895-959110:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:720379-720548:1:exon

position:720548:1
position: 720548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:830294-830526:1:exon

position:830294:1
position: 830294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:830526:1
position: 830526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:867200-867325:1:exon

position:867200:1
position: 867200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867325:1
position: 867325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:880969-881100:1:exon

position:880969:1
position: 880969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:881100:1
position: 881100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:903527-903647:1:exon

position:903527:1
position: 903527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:903647:1
position: 903647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:908576-908727:1:exon

position:908576:1
position: 908576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:908727:1
position: 908727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:957895-959110:1:exon

position:957895:1
position: 957895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NEGR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: NEGR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal growth regulator 1
translation: MARPVRGAGGSQQWLAAVLLGLCCLLPPGRIAAPGGDFPGAAADSLVVRKGDTAVLRCYLEDGASKGAWLNRSSIIFAGSDKWSVDPRVSIATANRREYSLQIQDVDVTDDGPYTCSVQTQHTPRTMQVHLTVQVSPKIFRISSDIIVNEGSNVTLVCLATGKPEPSISWRHISPSAKPFESGQYLDIYGITRDQAGEYECSAENDVSVPDVKKVKVTVNFAPTIQELKSSGVMLGGNGLIRCEGAGVPAPVFEWYRGERKLINGQQGITIKNYSTRSLLTVTNVTEEHFGNYTCVAANKLGTTNASLPLNPPSTAQYGITGDAEVLFSCWYLVLTLSSLTSIFYLKNIILH
SIO_010081: NEGR1
subclass of: SO_0000673
so part of: NEGR1
location: join(720379..720548,830294..830526,867200..867325,880969..881100,903527..903647,908576..908727,957895..958019)
location: region:720379-958019:1
so has part: feature:720379-720548:1:exon
so has part: feature:830294-830526:1:exon
so has part: feature:867200-867325:1:exon
so has part: feature:880969-881100:1:exon
so has part: feature:903527-903647:1:exon
so has part: feature:908576-908727:1:exon
so has part: feature:957895-958019:1:exon

XP_032047778.1
type: Protein
SIO_000068: ncbiprotein

position:958019:1
position: 958019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:720379-720548:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:830294-830526:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:867200-867325:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:880969-881100:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:903527-903647:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:908576-908727:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:957895-958019:1:exon

ZRANB2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: ZRANB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1024490..1035747
location: region:1024490-1035747:1
so has part: feature:1024490-1035747:1:exon
subclass of: SO_0000010

116491833
type: Gene
SIO_000068: ncbigene

position:1024490:1
position: 1024490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1035747:1
position: 1035747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1024490-1035747:1:exon

ZRANB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ZRANB2
product: zinc finger RANBP2-type containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032192176.1
SIO_010081: ZRANB2
subclass of: SO_0000673
so part of: ZRANB2
location: join(1024490..1024578,1024653..1024705,1024803..1024911,1026572..1026654,1028050..1028126,1028705..1028842,1029262..1029434,1031771..1031857,1033646..1033810,1034348..1035747)
location: region:1024490-1035747:1
so has part: feature:1024490-1024578:1:exon
so has part: feature:1024653-1024705:1:exon
so has part: feature:1024803-1024911:1:exon
so has part: feature:1026572-1026654:1:exon
so has part: feature:1028050-1028126:1:exon
so has part: feature:1028705-1028842:1:exon
so has part: feature:1029262-1029434:1:exon
so has part: feature:1031771-1031857:1:exon
so has part: feature:1033646-1033810:1:exon
so has part: feature:1034348-1035747:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1024490-1024578:1:exon

position:1024578:1
position: 1024578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1024653-1024705:1:exon

position:1024653:1
position: 1024653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024705:1
position: 1024705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1024803-1024911:1:exon

position:1024803:1
position: 1024803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024911:1
position: 1024911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1026572-1026654:1:exon

position:1026572:1
position: 1026572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1026654:1
position: 1026654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1028050-1028126:1:exon

position:1028050:1
position: 1028050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1028126:1
position: 1028126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1028705-1028842:1:exon

position:1028705:1
position: 1028705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1028842:1
position: 1028842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1029262-1029434:1:exon

position:1029262:1
position: 1029262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029434:1
position: 1029434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1031771-1031857:1:exon

position:1031771:1
position: 1031771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031857:1
position: 1031857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1033646-1033810:1:exon

position:1033646:1
position: 1033646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033810:1
position: 1033810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1034348-1035747:1:exon

position:1034348:1
position: 1034348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZRANB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: ZRANB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger Ran-binding domain-containing protein 2
translation: MSTKNFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFSANDWQCKTCGNVNWARRSECNMCNTPKYAKLEERTGYGGGFNERENVEYIEREESDGEYDEFGRKKKKYRGKPVGPASILKEVEDKESEGEDEEDEDEDLSKYKLDEDEDEDDADLSKYNLDASEEEDTNKKKKSNRRSRSKSRSSHSRSSSRSSSHSSSRSRSRSHSRSSSSSRSRSRSSSREHSRSRGSKSRSSSRSYRGSSTPRKRSYSSSRSSSSPERSKKRSRSRSSSSGDRKKRRSRSRSPERRCRSSSGSSHSGSRTSSKKK
SIO_010081: ZRANB2
subclass of: SO_0000673
so part of: ZRANB2
location: join(1024523..1024578,1024653..1024705,1024803..1024911,1026572..1026654,1028050..1028126,1028705..1028842,1029262..1029434,1031771..1031857,1033646..1033810,1034348..1034411)
location: region:1024523-1034411:1
so has part: feature:1024523-1024578:1:exon
so has part: feature:1024653-1024705:1:exon
so has part: feature:1024803-1024911:1:exon
so has part: feature:1026572-1026654:1:exon
so has part: feature:1028050-1028126:1:exon
so has part: feature:1028705-1028842:1:exon
so has part: feature:1029262-1029434:1:exon
so has part: feature:1031771-1031857:1:exon
so has part: feature:1033646-1033810:1:exon
so has part: feature:1034348-1034411:1:exon

XP_032048067.1
type: Protein
SIO_000068: ncbiprotein

position:1024523:1
position: 1024523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034411:1
position: 1034411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1024523-1024578:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1024653-1024705:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1024803-1024911:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1026572-1026654:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1028050-1028126:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1028705-1028842:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1029262-1029434:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1031771-1031857:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1033646-1033810:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1034348-1034411:1:exon

PTGER3
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: PTGER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1039803..1048739
location: region:1039803-1048739:1
so has part: feature:1039803-1048739:1:exon
subclass of: SO_0000010

116492236
type: Gene
SIO_000068: ncbigene

position:1039803:1
position: 1039803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1048739:1
position: 1048739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1039803-1048739:1:exon

PTGER3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: PTGER3
product: prostaglandin E receptor 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032192813.1
SIO_010081: PTGER3
subclass of: SO_0000673
so part of: PTGER3
location: join(1039803..1040645,1047990..1048739)
location: region:1039803-1048739:1
so has part: feature:1039803-1040645:1:exon
so has part: feature:1047990-1048739:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1039803-1040645:1:exon

position:1040645:1
position: 1040645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1047990-1048739:1:exon

position:1047990:1
position: 1047990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTGER3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: PTGER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prostaglandin E2 receptor EP3 subtype
translation: MSRRPLCQGGPNGSEPGAMRPRGNGTGRAAAAAAEGCGAVSVAFPLTMMITGIVGNALAMLLVSRSYRAKENRRRRSFLLCIGSLALTDLAGQLLTSPIVIAVYLSDRVWVAVDPSGHLCAFFGFSMTVFGLCPLFIASAMAVERTLAIRAPHWYASHMKTRMTKTALLGIWLAVLSFALLPIAGLGRYTLQWPGTWCFISTGDSELSGSFFASTFAGLGLFSLLVTVACNLATIEALVSRCRTKAAAPRSSKQWGRIATETLIQLLGIMCVLSACWAPLLITMLKMIFSHTSFEHCKGFSAEAQSSELHKECNFFLTAVRLASLNQILDPWVYLLLRKILLQKFCQAANAVSKCSNNEWKDRSITLSDEIRRTAA
SIO_010081: PTGER3
subclass of: SO_0000673
so part of: PTGER3
location: join(1039803..1040645,1047990..1048277)
location: region:1039803-1048277:1
so has part: feature:1039803-1040645:1:exon
so has part: feature:1047990-1048277:1:exon

XP_032048704.1
type: Protein
SIO_000068: ncbiprotein

position:1048277:1
position: 1048277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1039803-1040645:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1047990-1048277:1:exon

CTH
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: CTH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1091874..1110171)
location: region:1091874-1110171:-1
so has part: feature:1091874-1110171:-1:exon
subclass of: SO_0000010

116491813
type: Gene
SIO_000068: ncbigene

position:1091874:-1
position: 1091874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1110171:-1
position: 1110171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1091874-1110171:-1:exon

CTH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: CTH
product: cystathionine gamma-lyase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032192134.1
SIO_010081: CTH
subclass of: SO_0000673
so part of: CTH
location: complement(join(1091874..1092599,1095193..1095331,1097393..1097445,1099200..1099321,1099560..1099712,1100020..1100097,1101027..1101084,1103190..1103321,1103901..1104010,1106502..1106597,1107141..1107222,1110002..1110171))
location: region:1091874-1110171:-1
so has part: feature:1110002-1110171:-1:exon
so has part: feature:1107141-1107222:-1:exon
so has part: feature:1106502-1106597:-1:exon
so has part: feature:1103901-1104010:-1:exon
so has part: feature:1103190-1103321:-1:exon
so has part: feature:1101027-1101084:-1:exon
so has part: feature:1100020-1100097:-1:exon
so has part: feature:1099560-1099712:-1:exon
so has part: feature:1099200-1099321:-1:exon
so has part: feature:1097393-1097445:-1:exon
so has part: feature:1095193-1095331:-1:exon
so has part: feature:1091874-1092599:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1110002-1110171:-1:exon

position:1110002:-1
position: 1110002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1107141-1107222:-1:exon

position:1107141:-1
position: 1107141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1107222:-1
position: 1107222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1106502-1106597:-1:exon

position:1106502:-1
position: 1106502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1106597:-1
position: 1106597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1103901-1104010:-1:exon

position:1103901:-1
position: 1103901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104010:-1
position: 1104010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1103190-1103321:-1:exon

position:1103190:-1
position: 1103190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1103321:-1
position: 1103321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1101027-1101084:-1:exon

position:1101027:-1
position: 1101027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1101084:-1
position: 1101084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1100020-1100097:-1:exon

position:1100020:-1
position: 1100020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1100097:-1
position: 1100097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1099560-1099712:-1:exon

position:1099560:-1
position: 1099560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1099712:-1
position: 1099712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1099200-1099321:-1:exon

position:1099200:-1
position: 1099200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1099321:-1
position: 1099321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1097393-1097445:-1:exon

position:1097393:-1
position: 1097393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1097445:-1
position: 1097445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1095193-1095331:-1:exon

position:1095193:-1
position: 1095193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1095331:-1
position: 1095331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1091874-1092599:-1:exon

position:1092599:-1
position: 1092599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CTH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: CTH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cystathionine gamma-lyase
translation: MERGAARGFLAPFGHFATQAIHAGQEPEQWRSGAVVPPLSLSTTFKQRAPGQHAGYEYSRSGNPTRNCLEKAVAALDGAKYCLAYASGLAATLNITHLLKAGDTIICMDDVYGGTNRYFRQVAMKMGINVVFVDCTKLKHLEAAITPETKLVWIETPTNPTLKVIDIQGCANVVHKHKDVLLVVDNTFMSAYFQRPLSLGADICMYSATKYMNGHSDVVMGLVSVNCDDLYERLKFLQNSLGAVPSPFDCYLCNRGLKTLKIRMNQHFHNALAVARFLESDSRVEKVIFPGLPSHPQHELIKRQCTGCPGMITFYIKGNLENATAFLNNLKVFALAESLGGYESLAEHPAIMTHASVPKEDREALGISDTLIRLSIGLEDEEDLLEDLDQALKAAFPDHNALK
SIO_010081: CTH
subclass of: SO_0000673
so part of: CTH
location: complement(join(1092573..1092599,1095193..1095331,1097393..1097445,1099200..1099321,1099560..1099712,1100020..1100097,1101027..1101084,1103190..1103321,1103901..1104010,1106502..1106597,1107141..1107222,1110002..1110163))
location: region:1092573-1110163:-1
so has part: feature:1110002-1110163:-1:exon
so has part: feature:1107141-1107222:-1:exon
so has part: feature:1106502-1106597:-1:exon
so has part: feature:1103901-1104010:-1:exon
so has part: feature:1103190-1103321:-1:exon
so has part: feature:1101027-1101084:-1:exon
so has part: feature:1100020-1100097:-1:exon
so has part: feature:1099560-1099712:-1:exon
so has part: feature:1099200-1099321:-1:exon
so has part: feature:1097393-1097445:-1:exon
so has part: feature:1095193-1095331:-1:exon
so has part: feature:1092573-1092599:-1:exon

XP_032048025.1
type: Protein
SIO_000068: ncbiprotein

position:1092573:-1
position: 1092573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1110163:-1
position: 1110163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1110002-1110163:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1107141-1107222:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1106502-1106597:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1103901-1104010:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1103190-1103321:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1101027-1101084:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1100020-1100097:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1099560-1099712:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1099200-1099321:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1097393-1097445:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1095193-1095331:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1092573-1092599:-1:exon

ANKRD13C
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: ANKRD13C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1112485..1136838
location: region:1112485-1136838:1
so has part: feature:1112485-1136838:1:exon
subclass of: SO_0000010

116491809
type: Gene
SIO_000068: ncbigene

position:1112485:1
position: 1112485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1136838:1
position: 1136838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1112485-1136838:1:exon

ANKRD13C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ANKRD13C
product: ankyrin repeat domain 13C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032192127.1
SIO_010081: ANKRD13C
subclass of: SO_0000673
so part of: ANKRD13C
location: join(1112485..1112912,1117826..1117867,1120503..1120607,1121553..1121638,1123038..1123083,1124178..1124244,1125902..1126046,1126800..1126931,1127909..1128070,1128772..1128851,1130290..1130388,1131098..1131198,1132208..1136838)
location: region:1112485-1136838:1
so has part: feature:1112485-1112912:1:exon
so has part: feature:1117826-1117867:1:exon
so has part: feature:1120503-1120607:1:exon
so has part: feature:1121553-1121638:1:exon
so has part: feature:1123038-1123083:1:exon
so has part: feature:1124178-1124244:1:exon
so has part: feature:1125902-1126046:1:exon
so has part: feature:1126800-1126931:1:exon
so has part: feature:1127909-1128070:1:exon
so has part: feature:1128772-1128851:1:exon
so has part: feature:1130290-1130388:1:exon
so has part: feature:1131098-1131198:1:exon
so has part: feature:1132208-1136838:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1112485-1112912:1:exon

position:1112912:1
position: 1112912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1117826-1117867:1:exon

position:1117826:1
position: 1117826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1117867:1
position: 1117867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1120503-1120607:1:exon

position:1120503:1
position: 1120503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1120607:1
position: 1120607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1121553-1121638:1:exon

position:1121553:1
position: 1121553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1121638:1
position: 1121638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1123038-1123083:1:exon

position:1123038:1
position: 1123038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1123083:1
position: 1123083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1124178-1124244:1:exon

position:1124178:1
position: 1124178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1124244:1
position: 1124244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1125902-1126046:1:exon

position:1125902:1
position: 1125902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1126046:1
position: 1126046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1126800-1126931:1:exon

position:1126800:1
position: 1126800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1126931:1
position: 1126931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1127909-1128070:1:exon

position:1127909:1
position: 1127909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1128070:1
position: 1128070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1128772-1128851:1:exon

position:1128772:1
position: 1128772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1128851:1
position: 1128851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1130290-1130388:1:exon

position:1130290:1
position: 1130290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1130388:1
position: 1130388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1131098-1131198:1:exon

position:1131098:1
position: 1131098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1131198:1
position: 1131198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1132208-1136838:1:exon

position:1132208:1
position: 1132208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ANKRD13C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: ANKRD13C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein 13C
translation: MTGEKLRSVRREHRPCKAGGGLLGPGDEEAAAAPGGGGGGGFTAGRAKAARAGGRRASGPQALKAPPVAGGGGGGGGGGGGGPGAEPGRGPAHFPVHECVFKGDVRRLSALIRTQGIGQKDSHGNTPLHLAVMLGHKECAHLLLAHNAPVKVKNAQGWSPLAEAISYGDRQMITALLRKLKQQSRESVEEKRPRLLKALKELGDFYLELHWDFQSWVPLLSRILPSDACKIHKQGINIRLDTTLIDFTDMKCQRGDLSFIFNGDAAPSESFVVLDNEQKVYQRIHHEESEMETEEEVDILMSSDIYSATLSTKSITFTRAQTGWLFREDKTERVGNFLADFYLVNGLVLESRKRREHLSEEDILRNKAIMESLSKGGNLMEQNFEPVRRQSLTPPSPNTITWEEYISAENGKAPHLGRELVCKESKKTFKATIAMSQEFPLGIESLLNVLEVIAPFKHFNKLREFVQMKLPPGFPVKLDIPVFPTITATVTFQEFRYDEFDESIFTIPDDYKEDPSRFPDL
SIO_010081: ANKRD13C
subclass of: SO_0000673
so part of: ANKRD13C
location: join(1112543..1112912,1117826..1117867,1120503..1120607,1121553..1121638,1123038..1123083,1124178..1124244,1125902..1126046,1126800..1126931,1127909..1128070,1128772..1128851,1130290..1130388,1131098..1131198,1132208..1132338)
location: region:1112543-1132338:1
so has part: feature:1112543-1112912:1:exon
so has part: feature:1117826-1117867:1:exon
so has part: feature:1120503-1120607:1:exon
so has part: feature:1121553-1121638:1:exon
so has part: feature:1123038-1123083:1:exon
so has part: feature:1124178-1124244:1:exon
so has part: feature:1125902-1126046:1:exon
so has part: feature:1126800-1126931:1:exon
so has part: feature:1127909-1128070:1:exon
so has part: feature:1128772-1128851:1:exon
so has part: feature:1130290-1130388:1:exon
so has part: feature:1131098-1131198:1:exon
so has part: feature:1132208-1132338:1:exon

XP_032048018.1
type: Protein
SIO_000068: ncbiprotein

position:1112543:1
position: 1112543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132338:1
position: 1132338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1112543-1112912:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1117826-1117867:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1120503-1120607:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1121553-1121638:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1123038-1123083:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1124178-1124244:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1125902-1126046:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1126800-1126931:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1127909-1128070:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1128772-1128851:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1130290-1130388:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1131098-1131198:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1132208-1132338:1:exon

SRSF11
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: SRSF11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1140511..1158664)
location: region:1140511-1158664:-1
so has part: feature:1140511-1158664:-1:exon
subclass of: SO_0000010

116491734
type: Gene
SIO_000068: ncbigene

position:1140511:-1
position: 1140511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1158664:-1
position: 1158664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1140511-1158664:-1:exon

SRSF11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SRSF11
product: serine and arginine rich splicing factor 11
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032191949.1
SIO_010081: SRSF11
subclass of: SO_0000673
so part of: SRSF11
location: complement(join(1140511..1141269,1141381..1141520,1142137..1142232,1142903..1142992,1143489..1143620,1144756..1144837,1145280..1145407,1146590..1146639,1147755..1147847,1149321..1149430,1153406..1153539,1158341..1158478,1158635..1158664))
location: region:1140511-1158664:-1
so has part: feature:1158635-1158664:-1:exon
so has part: feature:1158341-1158478:-1:exon
so has part: feature:1153406-1153539:-1:exon
so has part: feature:1149321-1149430:-1:exon
so has part: feature:1147755-1147847:-1:exon
so has part: feature:1146590-1146639:-1:exon
so has part: feature:1145280-1145407:-1:exon
so has part: feature:1144756-1144837:-1:exon
so has part: feature:1143489-1143620:-1:exon
so has part: feature:1142903-1142992:-1:exon
so has part: feature:1142137-1142232:-1:exon
so has part: feature:1141381-1141520:-1:exon
so has part: feature:1140511-1141269:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1158635-1158664:-1:exon

position:1158635:-1
position: 1158635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1158341-1158478:-1:exon

position:1158341:-1
position: 1158341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1158478:-1
position: 1158478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1153406-1153539:-1:exon

position:1153406:-1
position: 1153406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1153539:-1
position: 1153539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1149321-1149430:-1:exon

position:1149321:-1
position: 1149321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149430:-1
position: 1149430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1147755-1147847:-1:exon

position:1147755:-1
position: 1147755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1147847:-1
position: 1147847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1146590-1146639:-1:exon

position:1146590:-1
position: 1146590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1146639:-1
position: 1146639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1145280-1145407:-1:exon

position:1145280:-1
position: 1145280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1145407:-1
position: 1145407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1144756-1144837:-1:exon

position:1144756:-1
position: 1144756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1144837:-1
position: 1144837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1143489-1143620:-1:exon

position:1143489:-1
position: 1143489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1143620:-1
position: 1143620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1142903-1142992:-1:exon

position:1142903:-1
position: 1142903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1142992:-1
position: 1142992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1142137-1142232:-1:exon

position:1142137:-1
position: 1142137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1142232:-1
position: 1142232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1141381-1141520:-1:exon

position:1141381:-1
position: 1141381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1141520:-1
position: 1141520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1140511-1141269:-1:exon

position:1141269:-1
position: 1141269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SRSF11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SRSF11
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: serine/arginine-rich splicing factor 11
translation: MASSSGTDVIQVTNVSPSASSEQMRTLFGFLGKIEELRLFPPDDSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLAPANAVAGLLPGGGLLPTPNPLSQIGAVPLAALGAPALDPALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSSKEIEEAMKRVREAQSLISAAIEPDKKDEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRERSRRSRSTSKTRDKKKEEKEKKRSKTPPKSYSTTRRSRSTSRERRRRRSRSGTRSPKKPRSPKRKMSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVKVTRDYDEEEQGYDSEKEKKEEKKMADSSSPKVKESAADKGSGDSSRESKVNGDDHHEEDMDMSD
SIO_010081: SRSF11
subclass of: SO_0000673
so part of: SRSF11
location: complement(join(1141075..1141269,1141381..1141520,1142137..1142232,1142903..1142992,1143489..1143620,1144756..1144837,1145280..1145407,1146590..1146639,1147755..1147847,1149321..1149430,1153406..1153539,1158341..1158468))
location: region:1141075-1158468:-1
so has part: feature:1158341-1158468:-1:exon
so has part: feature:1153406-1153539:-1:exon
so has part: feature:1149321-1149430:-1:exon
so has part: feature:1147755-1147847:-1:exon
so has part: feature:1146590-1146639:-1:exon
so has part: feature:1145280-1145407:-1:exon
so has part: feature:1144756-1144837:-1:exon
so has part: feature:1143489-1143620:-1:exon
so has part: feature:1142903-1142992:-1:exon
so has part: feature:1142137-1142232:-1:exon
so has part: feature:1141381-1141520:-1:exon
so has part: feature:1141075-1141269:-1:exon

XP_032047840.1
type: Protein
SIO_000068: ncbiprotein

position:1141075:-1
position: 1141075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1158468:-1
position: 1158468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1158341-1158468:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1153406-1153539:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1149321-1149430:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1147755-1147847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1146590-1146639:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1145280-1145407:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1144756-1144837:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1143489-1143620:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1142903-1142992:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1142137-1142232:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1141381-1141520:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1141075-1141269:-1:exon

LRRC40
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LRRC40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1160300..1177609
location: region:1160300-1177609:1
so has part: feature:1160300-1177609:1:exon
subclass of: SO_0000010

116491854
type: Gene
SIO_000068: ncbigene

position:1160300:1
position: 1160300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1177609:1
position: 1177609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1160300-1177609:1:exon

LRRC40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LRRC40
product: leucine rich repeat containing 40
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032192212.1
SIO_010081: LRRC40
subclass of: SO_0000673
so part of: LRRC40
location: join(1160300..1160456,1160750..1160931,1161439..1161512,1162478..1162607,1163019..1163142,1163970..1164112,1165197..1165369,1165682..1165772,1168221..1168266,1170693..1170801,1171722..1171829,1173419..1173529,1174766..1174843,1175564..1175749,1176885..1177609)
location: region:1160300-1177609:1
so has part: feature:1160300-1160456:1:exon
so has part: feature:1160750-1160931:1:exon
so has part: feature:1161439-1161512:1:exon
so has part: feature:1162478-1162607:1:exon
so has part: feature:1163019-1163142:1:exon
so has part: feature:1163970-1164112:1:exon
so has part: feature:1165197-1165369:1:exon
so has part: feature:1165682-1165772:1:exon
so has part: feature:1168221-1168266:1:exon
so has part: feature:1170693-1170801:1:exon
so has part: feature:1171722-1171829:1:exon
so has part: feature:1173419-1173529:1:exon
so has part: feature:1174766-1174843:1:exon
so has part: feature:1175564-1175749:1:exon
so has part: feature:1176885-1177609:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1160300-1160456:1:exon

position:1160456:1
position: 1160456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1160750-1160931:1:exon

position:1160750:1
position: 1160750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1160931:1
position: 1160931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1161439-1161512:1:exon

position:1161439:1
position: 1161439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1161512:1
position: 1161512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1162478-1162607:1:exon

position:1162478:1
position: 1162478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1162607:1
position: 1162607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1163019-1163142:1:exon

position:1163019:1
position: 1163019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1163142:1
position: 1163142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1163970-1164112:1:exon

position:1163970:1
position: 1163970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164112:1
position: 1164112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1165197-1165369:1:exon

position:1165197:1
position: 1165197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1165369:1
position: 1165369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1165682-1165772:1:exon

position:1165682:1
position: 1165682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1165772:1
position: 1165772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1168221-1168266:1:exon

position:1168221:1
position: 1168221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1168266:1
position: 1168266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1170693-1170801:1:exon

position:1170693:1
position: 1170693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1170801:1
position: 1170801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1171722-1171829:1:exon

position:1171722:1
position: 1171722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1171829:1
position: 1171829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1173419-1173529:1:exon

position:1173419:1
position: 1173419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1173529:1
position: 1173529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1174766-1174843:1:exon

position:1174766:1
position: 1174766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1174843:1
position: 1174843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1175564-1175749:1:exon

position:1175564:1
position: 1175564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1175749:1
position: 1175749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1176885-1177609:1:exon

position:1176885:1
position: 1176885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LRRC40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LRRC40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 40
translation: MAAAAARRARPGQPRSGFGRAAEEPGPAVPQGLLRAARKSGQLNLAGRGLGQVPQHVWRINLDTPEEAHQNLSFGAADRWWEQTDLTKLILASNKLQLLSEDVKLLPALTVLDVHDNQLTSLPSALGQLENLQKLDVSHNKLKSIPEELMQLSHLKSLLLQHNELSDLPDGFGQLVSLEELDLSNNHLTDIPTSFALLVNLVRLNLACNQLKNLPADLSAMKSLRQLDCTKNYLETVPAELASMASLEQLYLRKNKLRSLPELPSCKLLKELHAGENQIEILNAENLKHLNSLSVLELRDNKIKSVPDEITLLQKLERLDLANNDISRLPYTLGNLPQLKFLALEGNPLRTIRRDLLQKGTQELLKYLRSKIQDDGPSPNEEPPVTAMTLPSESRINMHAITSLKLLEYSEKQAAVIPDEMFNAVRSNPVATVNFSKNQLTAIPARIVELKDSLCDLNFGFNKISSISSELCMLHKLTHLDIRNNFLTSLPEEMEALTTLQVINLSFNRFKVFPSVLYRILALETILLSNNQVGSIDPLQLKKMEKLGTLDLQNNDLLQVPPELGNCENLRTLLLEGNPFRTPRAAILAKGTAAVLEYLRSRIPT
SIO_010081: LRRC40
subclass of: SO_0000673
so part of: LRRC40
location: join(1160300..1160456,1160750..1160931,1161439..1161512,1162478..1162607,1163019..1163142,1163970..1164112,1165197..1165369,1165682..1165772,1168221..1168266,1170693..1170801,1171722..1171829,1173419..1173529,1174766..1174843,1175564..1175749,1176885..1176990)
location: region:1160300-1176990:1
so has part: feature:1160300-1160456:1:exon
so has part: feature:1160750-1160931:1:exon
so has part: feature:1161439-1161512:1:exon
so has part: feature:1162478-1162607:1:exon
so has part: feature:1163019-1163142:1:exon
so has part: feature:1163970-1164112:1:exon
so has part: feature:1165197-1165369:1:exon
so has part: feature:1165682-1165772:1:exon
so has part: feature:1168221-1168266:1:exon
so has part: feature:1170693-1170801:1:exon
so has part: feature:1171722-1171829:1:exon
so has part: feature:1173419-1173529:1:exon
so has part: feature:1174766-1174843:1:exon
so has part: feature:1175564-1175749:1:exon
so has part: feature:1176885-1176990:1:exon

XP_032048103.1
type: Protein
SIO_000068: ncbiprotein

position:1176990:1
position: 1176990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1160300-1160456:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1160750-1160931:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1161439-1161512:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1162478-1162607:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1163019-1163142:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1163970-1164112:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1165197-1165369:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1165682-1165772:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1168221-1168266:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1170693-1170801:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1171722-1171829:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1173419-1173529:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1174766-1174843:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1175564-1175749:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1176885-1176990:1:exon

LRRC7
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LRRC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1183064..1353672)
location: region:1183064-1353672:-1
so has part: feature:1183064-1353672:-1:exon
subclass of: SO_0000010

116491689
type: Gene
SIO_000068: ncbigene

position:1183064:-1
position: 1183064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1353672:-1
position: 1353672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1183064-1353672:-1:exon

LRRC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LRRC7
product: leucine rich repeat containing 7, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032191862.1
SIO_010081: LRRC7
subclass of: SO_0000673
so part of: LRRC7
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location: region:1183064-1353672:-1
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urn:…
SIO_000300: 1
SIO_000628: feature:1353252-1353672:-1:exon

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urn:…
SIO_000300: 2
SIO_000628: feature:1299043-1299130:-1:exon

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urn:…
SIO_000300: 3
SIO_000628: feature:1274710-1274912:-1:exon

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urn:…
SIO_000300: 4
SIO_000628: feature:1269262-1269379:-1:exon

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urn:…
SIO_000300: 5
SIO_000628: feature:1268294-1268372:-1:exon

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position:1268372:-1
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urn:…
SIO_000300: 6
SIO_000628: feature:1267479-1267568:-1:exon

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urn:…
SIO_000300: 7
SIO_000628: feature:1264878-1264934:-1:exon

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urn:…
SIO_000300: 8
SIO_000628: feature:1241201-1241264:-1:exon

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urn:…
SIO_000300: 9
SIO_000628: feature:1239576-1239650:-1:exon

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position:1239650:-1
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urn:…
SIO_000300: 10
SIO_000628: feature:1236424-1236568:-1:exon

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position:1236568:-1
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urn:…
SIO_000300: 11
SIO_000628: feature:1235957-1236029:-1:exon

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position:1236029:-1
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urn:…
SIO_000300: 12
SIO_000628: feature:1232201-1232330:-1:exon

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urn:…
SIO_000300: 13
SIO_000628: feature:1231690-1231805:-1:exon

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urn:…
SIO_000300: 14
SIO_000628: feature:1223738-1223807:-1:exon

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urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
SIO_000628: feature:1220913-1221037:-1:exon

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urn:…
SIO_000300: 17
SIO_000628: feature:1215479-1215679:-1:exon

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urn:…
SIO_000300: 18
SIO_000628: feature:1206974-1207085:-1:exon

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urn:…
SIO_000300: 19
SIO_000628: feature:1206564-1206744:-1:exon

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reference: sequence
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urn:…
SIO_000300: 20
SIO_000628: feature:1203925-1205602:-1:exon

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reference: sequence
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position:1205602:-1
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urn:…
SIO_000300: 21
SIO_000628: feature:1197776-1197895:-1:exon

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urn:…
SIO_000300: 22
SIO_000628: feature:1192617-1192835:-1:exon

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urn:…
SIO_000300: 23
SIO_000628: feature:1191236-1191328:-1:exon

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urn:…
SIO_000300: 24
SIO_000628: feature:1188628-1188702:-1:exon

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urn:…
SIO_000300: 25
SIO_000628: feature:1183064-1185558:-1:exon

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reference: sequence
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LRRC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LRRC7
product: leucine rich repeat containing 7, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032191860.1
SIO_010081: LRRC7
subclass of: SO_0000673
so part of: LRRC7
location: complement(join(1183064..1185558,1188628..1188702,1191236..1191328,1192617..1192835,1197776..1197895,1202046..1202195,1203925..1205602,1206564..1206744,1206974..1207085,1215479..1215679,1220913..1221037,1221707..1221806,1223738..1223807,1231690..1231805,1232201..1232330,1235957..1236029,1236424..1236568,1239576..1239650,1241201..1241264,1264878..1264934,1267479..1267568,1268294..1268372,1269262..1269379,1274710..1274912,1299043..1299130,1353252..1353672))
location: region:1183064-1353672:-1
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urn:…
SIO_000300: 1
SIO_000628: feature:1353252-1353672:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1299043-1299130:-1:exon

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SIO_000300: 6
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SIO_000300: 8
SIO_000628: feature:1241201-1241264:-1:exon

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SIO_000628: feature:1239576-1239650:-1:exon

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SIO_000300: 10
SIO_000628: feature:1236424-1236568:-1:exon

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SIO_000300: 11
SIO_000628: feature:1235957-1236029:-1:exon

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SIO_000300: 12
SIO_000628: feature:1232201-1232330:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1231690-1231805:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1223738-1223807:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1221707-1221806:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1220913-1221037:-1:exon

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SIO_000300: 17
SIO_000628: feature:1215479-1215679:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1206974-1207085:-1:exon

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SIO_000628: feature:1206564-1206744:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1203925-1205602:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1202046-1202195:-1:exon

position:1202046:-1
position: 1202046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202195:-1
position: 1202195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1197776-1197895:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1192617-1192835:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1191236-1191328:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1188628-1188702:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1183064-1185558:-1:exon

LRRC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LRRC7
product: leucine rich repeat containing 7, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032191861.1
SIO_010081: LRRC7
subclass of: SO_0000673
so part of: LRRC7
location: complement(join(1183064..1185558,1188628..1188702,1191236..1191328,1192617..1192835,1197776..1197895,1203925..1205605,1206564..1206744,1206974..1207085,1215479..1215679,1220913..1221037,1221707..1221806,1223738..1223807,1231690..1231805,1232201..1232330,1235957..1236029,1236424..1236568,1239576..1239650,1241201..1241264,1264878..1264934,1267479..1267568,1268294..1268372,1269262..1269379,1274710..1274912,1299043..1299130,1353252..1353672))
location: region:1183064-1353672:-1
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so has part: feature:1188628-1188702:-1:exon
so has part: feature:1183064-1185558:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1353252-1353672:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1299043-1299130:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1274710-1274912:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1269262-1269379:-1:exon

urn:…
SIO_000300: 5
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SIO_000300: 6
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urn:…
SIO_000300: 7
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SIO_000300: 8
SIO_000628: feature:1241201-1241264:-1:exon

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SIO_000300: 9
SIO_000628: feature:1239576-1239650:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1236424-1236568:-1:exon

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SIO_000300: 11
SIO_000628: feature:1235957-1236029:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1232201-1232330:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1231690-1231805:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1223738-1223807:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1221707-1221806:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1220913-1221037:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1215479-1215679:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1206974-1207085:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1206564-1206744:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1203925-1205605:-1:exon

position:1205605:-1
position: 1205605
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 21
SIO_000628: feature:1197776-1197895:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1192617-1192835:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1191236-1191328:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1188628-1188702:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1183064-1185558:-1:exon

LRRC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LRRC7
product: leucine rich repeat containing 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032191858.1
SIO_010081: LRRC7
subclass of: SO_0000673
so part of: LRRC7
location: complement(join(1183064..1185558,1188628..1188702,1191236..1191328,1192617..1192835,1197776..1197895,1202046..1202195,1203925..1205605,1206564..1206744,1206974..1207085,1215479..1215679,1220913..1221037,1221707..1221806,1223738..1223807,1231690..1231805,1232201..1232330,1235957..1236029,1236424..1236568,1239576..1239650,1241201..1241264,1264878..1264934,1267479..1267568,1268294..1268372,1269262..1269379,1274710..1274912,1299043..1299130,1353252..1353672))
location: region:1183064-1353672:-1
so has part: feature:1353252-1353672:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:1353252-1353672:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1299043-1299130:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1274710-1274912:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1269262-1269379:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1268294-1268372:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1267479-1267568:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1264878-1264934:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1241201-1241264:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1239576-1239650:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1236424-1236568:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1235957-1236029:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1232201-1232330:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1231690-1231805:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1223738-1223807:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1221707-1221806:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1220913-1221037:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1215479-1215679:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1206974-1207085:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1206564-1206744:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1203925-1205605:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1202046-1202195:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1197776-1197895:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1192617-1192835:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1191236-1191328:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1188628-1188702:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1183064-1185558:-1:exon

LRRC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LRRC7
product: leucine rich repeat containing 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032191859.1
SIO_010081: LRRC7
subclass of: SO_0000673
so part of: LRRC7
location: complement(join(1183064..1185558,1188628..1188702,1191236..1191328,1192617..1192835,1197776..1197895,1202046..1202195,1203925..1205605,1206564..1206744,1206974..1207085,1215479..1215679,1220913..1221037,1221707..1221806,1223738..1223807,1231690..1231805,1232201..1232330,1235957..1236029,1236424..1236568,1239576..1239650,1241201..1241264,1264878..1264934,1267479..1267568,1268294..1268372,1269262..1269379,1274710..1274912,1299043..1299130,1338107..1338163))
location: region:1183064-1338163:-1
so has part: feature:1338107-1338163:-1:exon
so has part: feature:1299043-1299130:-1:exon
so has part: feature:1274710-1274912:-1:exon
so has part: feature:1269262-1269379:-1:exon
so has part: feature:1268294-1268372:-1:exon
so has part: feature:1267479-1267568:-1:exon
so has part: feature:1264878-1264934:-1:exon
so has part: feature:1241201-1241264:-1:exon
so has part: feature:1239576-1239650:-1:exon
so has part: feature:1236424-1236568:-1:exon
so has part: feature:1235957-1236029:-1:exon
so has part: feature:1232201-1232330:-1:exon
so has part: feature:1231690-1231805:-1:exon
so has part: feature:1223738-1223807:-1:exon
so has part: feature:1221707-1221806:-1:exon
so has part: feature:1220913-1221037:-1:exon
so has part: feature:1215479-1215679:-1:exon
so has part: feature:1206974-1207085:-1:exon
so has part: feature:1206564-1206744:-1:exon
so has part: feature:1203925-1205605:-1:exon
so has part: feature:1202046-1202195:-1:exon
so has part: feature:1197776-1197895:-1:exon
so has part: feature:1192617-1192835:-1:exon
so has part: feature:1191236-1191328:-1:exon
so has part: feature:1188628-1188702:-1:exon
so has part: feature:1183064-1185558:-1:exon

position:1338163:-1
position: 1338163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1338107-1338163:-1:exon

position:1338107:-1
position: 1338107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1299043-1299130:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1274710-1274912:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1269262-1269379:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1268294-1268372:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1267479-1267568:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1264878-1264934:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1241201-1241264:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1239576-1239650:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1236424-1236568:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1235957-1236029:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1232201-1232330:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1231690-1231805:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1223738-1223807:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1221707-1221806:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1220913-1221037:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1215479-1215679:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1206974-1207085:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1206564-1206744:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1203925-1205605:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1202046-1202195:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1197776-1197895:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1192617-1192835:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1191236-1191328:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1188628-1188702:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1183064-1185558:-1:exon

LRRC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LRRC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 7 isoform X4
translation: MPCLEMTTKRKIIGRLVPCRCFRGEEEIVSVLDYSHCGLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTTIASLVNLRELDISKNGIQDFPENIKCCKCLTIIEASVNPVSKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLTQLERLDLGNNEFSELPEVLEQIQNLKELWMDNNSLQILPGSIGKLKQLVYLDMSKNRIETVDLDISGCEGLEDLLLSSNMLQQLPDSIGLLKRLTTLKVDDNQLTILPNAIGNLSLLEEFDCSCNELESLPSTIGYLHNLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPDEIGQMQKLRVLNLSDNRLKNLPFTFTKLKELAALWLSDNQSKALIPLQTEAHPETKQRVLTNYMFPQQPRSDEDFQSDSDSFNPTLWEEQRQQRMTVAFEFEDKKEEEENAGKVKVEINLKRYPTPYPEDLKNMVKSVQNLVGKTSHGVRPENTAPTANSEQTVKEKYEHKWPMAPKEISVEDAFGHPASEMRIGELRPSIPETPLYPPKLVLLGKEKKESTDESEADKIHCLNNSVSSGTYSDYSPSQASSGSSNAHVKMGSLQTTAKDAVNNSLWGNRLVQSFPQPLETKPLLSQRESAPAGNLPQRNDRRPLSDTFTDSWNDSSHYDNTGFVAEESTVDNPSANPLLSTKSRSTSAHGRRPLIRQDRIVGIPLELEQPTLRNTHESEVPPPNPWQNWTRTPSPFEDRTAFPSKLENTPTTSPLPERKDHIKESPELSSTFTPGIAWEYHDSNANRSLTNVFSHIHCRPDPSKSVISISKSTERLSPMMRDLKTNKFKKSQSIDEIDIGTYKVYNIPLENYASGNDTVGAHERVDKLLGPEHGMLSMSRSQSVPMLDDELLTYGSVKVQPQQKSSVTKKVYQFDQSFNPQGAVEVTAEKRLPPPFQLNPEYIPQQSKNLPQELVSPRAYRGYPPVEHMFSFSQPSVNEEAVSAPFVSQGSRPGFLRRADSLASSTEMSMFRRVSEPHELPPSDRYGRPPYRGAVERQSSISVSESQFLKRNGRYEDEHPSYQEVKAQTGSFPVKNLTQRRPLSARSYSTESYGTSQTRPVSARPTMAALLEKIPSDYNLGNYGDKPSDNSDIKTRPTPVKGNESCAKMPADWRQQLLRHIEARRLDRTPSQQSSILDNGQDEVPVSGQWNPYPLGRRDVPPDTVTKKAGSHIQTLMGSQSLQHRSREQQYEGNMNKVTIQQFQPPLPIQIPSSQSSRAPQTGRCLIQTKGQRSTDAYQEQFCVRIEKNPGLGFSISGGISGQGNPFKPSDKGIFVTRVQPDGPASSLLQPGDKILQANGHSFVHMEHEKAVLLLKSFQNTVDLVIQRELTV
SIO_010081: LRRC7
subclass of: SO_0000673
so part of: LRRC7
location: complement(join(1185451..1185558,1188628..1188702,1191236..1191328,1192617..1192835,1197776..1197895,1203925..1205602,1206564..1206744,1206974..1207085,1215479..1215679,1220913..1221037,1221707..1221806,1223738..1223807,1231690..1231805,1232201..1232330,1235957..1236029,1236424..1236568,1239576..1239650,1241201..1241264,1264878..1264934,1267479..1267568,1268294..1268372,1269262..1269379,1274710..1274912,1299043))
location: region:1185451-1299043:-1
so has part: feature:1299043-1299043:-1:exon
so has part: feature:1274710-1274912:-1:exon
so has part: feature:1269262-1269379:-1:exon
so has part: feature:1268294-1268372:-1:exon
so has part: feature:1267479-1267568:-1:exon
so has part: feature:1264878-1264934:-1:exon
so has part: feature:1241201-1241264:-1:exon
so has part: feature:1239576-1239650:-1:exon
so has part: feature:1236424-1236568:-1:exon
so has part: feature:1235957-1236029:-1:exon
so has part: feature:1232201-1232330:-1:exon
so has part: feature:1231690-1231805:-1:exon
so has part: feature:1223738-1223807:-1:exon
so has part: feature:1221707-1221806:-1:exon
so has part: feature:1220913-1221037:-1:exon
so has part: feature:1215479-1215679:-1:exon
so has part: feature:1206974-1207085:-1:exon
so has part: feature:1206564-1206744:-1:exon
so has part: feature:1203925-1205602:-1:exon
so has part: feature:1197776-1197895:-1:exon
so has part: feature:1192617-1192835:-1:exon
so has part: feature:1191236-1191328:-1:exon
so has part: feature:1188628-1188702:-1:exon
so has part: feature:1185451-1185558:-1:exon

XP_032047753.1
type: Protein
SIO_000068: ncbiprotein

position:1185451:-1
position: 1185451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1299043-1299043:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274710-1274912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1269262-1269379:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1268294-1268372:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1267479-1267568:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1264878-1264934:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1241201-1241264:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1239576-1239650:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1236424-1236568:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1235957-1236029:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1232201-1232330:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1231690-1231805:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1223738-1223807:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1221707-1221806:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1220913-1221037:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1215479-1215679:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1206974-1207085:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1206564-1206744:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1203925-1205602:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1197776-1197895:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1192617-1192835:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1191236-1191328:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1188628-1188702:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1185451-1185558:-1:exon

LRRC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LRRC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 7 isoform X2
translation: MPCLEMTTKRKIIGRLVPCRCFRGEEEIVSVLDYSHCGLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTTIASLVNLRELDISKNGIQDFPENIKCCKCLTIIEASVNPVSKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLTQLERLDLGNNEFSELPEVLEQIQNLKELWMDNNSLQILPGSIGKLKQLVYLDMSKNRIETVDLDISGCEGLEDLLLSSNMLQQLPDSIGLLKRLTTLKVDDNQLTILPNAIGNLSLLEEFDCSCNELESLPSTIGYLHNLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPDEIGQMQKLRVLNLSDNRLKNLPFTFTKLKELAALWLSDNQSKALIPLQTEAHPETKQRVLTNYMFPQQPRSDEDFQSDSDSFNPTLWEEQRQQRMTVAFEFEDKKEEEENAGKVKVEINLKRYPTPYPEDLKNMVKSVQNLVGKTSHGVRPENTAPTANSEQTVKEKYEHKWPMAPKEISVEDAFGHPASEMRIGELRPSIPETPLYPPKLVLLGKEKKESTDESEADKIHCLNNSVSSGTYSDYSPSQASSGSSNAHVKMGSLQTTAKDAVNNSLWGNRLVQSFPQPLETKPLLSQRESAPAGNLPQRNDRRPLSDTFTDSWNDSSHYDNTGFVAEESTVDNPSANPLLSTKSRSTSAHGRRPLIRQDRIVGIPLELEQPTLRNTHESEVPPPNPWQNWTRTPSPFEDRTAFPSKLENTPTTSPLPERKDHIKESPELSSTFTPGIAWEYHDSNANRSLTNVFSHIHCRPDPSKSVISISKSTERLSPMMRDLKTNKFKKSQSIDEIDIGTYKVYNIPLENYASGNDTVGAHERVDKLLGPEHGMLSMSRSQSVPMLDDELLTYGSVKVQPQQKSSVTKKVYQFDQSFNPQGAVEVTAEKRLPPPFQLNPEYIPQQSKNLPQELVSPRAYRGYPPVEHMFSFSQPSVNEEAVSAPFVSQGSRPGFLRRADSLASSTEMSMFRRVSEPHELPPSDRYGRPPYRGAVERQSSISVSESQFLKRNGRYEDEHPSYQEVKAQTGSFPVKNLTQRRPLSARSYSTESYGTSQTRPVSARPTMAALLEKIPSDYNLGNYGDKPSDNSDIKTRPTPVKGNESCAKMPADWRQQLLRHIEARRLDRTAAYKHNTVSLGMLHSGGFSAMHAGRSMTLNLQTKSKFENQMLQELPLPKTPSQQSSILDNGQDEVPVSGQWNPYPLGRRDVPPDTVTKKAGSHIQTLMGSQSLQHRSREQQYEGNMNKVTIQQFQPPLPIQIPSSQSSRAPQTGRCLIQTKGQRSTDAYQEQFCVRIEKNPGLGFSISGGISGQGNPFKPSDKGIFVTRVQPDGPASSLLQPGDKILQANGHSFVHMEHEKAVLLLKSFQNTVDLVIQRELTV
SIO_010081: LRRC7
subclass of: SO_0000673
so part of: LRRC7
location: complement(join(1185451..1185558,1188628..1188702,1191236..1191328,1192617..1192835,1197776..1197895,1202046..1202195,1203925..1205602,1206564..1206744,1206974..1207085,1215479..1215679,1220913..1221037,1221707..1221806,1223738..1223807,1231690..1231805,1232201..1232330,1235957..1236029,1236424..1236568,1239576..1239650,1241201..1241264,1264878..1264934,1267479..1267568,1268294..1268372,1269262..1269379,1274710..1274912,1299043))
location: region:1185451-1299043:-1
so has part: feature:1299043-1299043:-1:exon
so has part: feature:1274710-1274912:-1:exon
so has part: feature:1269262-1269379:-1:exon
so has part: feature:1268294-1268372:-1:exon
so has part: feature:1267479-1267568:-1:exon
so has part: feature:1264878-1264934:-1:exon
so has part: feature:1241201-1241264:-1:exon
so has part: feature:1239576-1239650:-1:exon
so has part: feature:1236424-1236568:-1:exon
so has part: feature:1235957-1236029:-1:exon
so has part: feature:1232201-1232330:-1:exon
so has part: feature:1231690-1231805:-1:exon
so has part: feature:1223738-1223807:-1:exon
so has part: feature:1221707-1221806:-1:exon
so has part: feature:1220913-1221037:-1:exon
so has part: feature:1215479-1215679:-1:exon
so has part: feature:1206974-1207085:-1:exon
so has part: feature:1206564-1206744:-1:exon
so has part: feature:1203925-1205602:-1:exon
so has part: feature:1202046-1202195:-1:exon
so has part: feature:1197776-1197895:-1:exon
so has part: feature:1192617-1192835:-1:exon
so has part: feature:1191236-1191328:-1:exon
so has part: feature:1188628-1188702:-1:exon
so has part: feature:1185451-1185558:-1:exon

XP_032047751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1299043-1299043:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274710-1274912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1269262-1269379:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1268294-1268372:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1267479-1267568:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1264878-1264934:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1241201-1241264:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1239576-1239650:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1236424-1236568:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1235957-1236029:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1232201-1232330:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1231690-1231805:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1223738-1223807:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1221707-1221806:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1220913-1221037:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1215479-1215679:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1206974-1207085:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1206564-1206744:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1203925-1205602:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1202046-1202195:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1197776-1197895:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1192617-1192835:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1191236-1191328:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1188628-1188702:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1185451-1185558:-1:exon

LRRC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LRRC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 7 isoform X3
translation: MPCLEMTTKRKIIGRLVPCRCFRGEEEIVSVLDYSHCGLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTTIASLVNLRELDISKNGIQDFPENIKCCKCLTIIEASVNPVSKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLTQLERLDLGNNEFSELPEVLEQIQNLKELWMDNNSLQILPGSIGKLKQLVYLDMSKNRIETVDLDISGCEGLEDLLLSSNMLQQLPDSIGLLKRLTTLKVDDNQLTILPNAIGNLSLLEEFDCSCNELESLPSTIGYLHNLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPDEIGQMQKLRVLNLSDNRLKNLPFTFTKLKELAALWLSDNQSKALIPLQTEAHPETKQRVLTNYMFPQQPRSDEDFQSDSDSFNPTLWEEQRQQRMTVAFEFEDKKEEEENAGKVKVEINLKRYPTPYPEDLKNMVKSVQNLVGKTSHGVRPENTAPTANSEQTVKEKYEHKWPMAPKEISVEDAFGHPASEMRIGELRPSIPETPLYPPKLVLLGKEKKESTDESEADKIHCLNNSVSSGTYSDYSPSQASSGSSNAHVKMGSLQTTAKDAVNNSLWGNSRLVQSFPQPLETKPLLSQRESAPAGNLPQRNDRRPLSDTFTDSWNDSSHYDNTGFVAEESTVDNPSANPLLSTKSRSTSAHGRRPLIRQDRIVGIPLELEQPTLRNTHESEVPPPNPWQNWTRTPSPFEDRTAFPSKLENTPTTSPLPERKDHIKESPELSSTFTPGIAWEYHDSNANRSLTNVFSHIHCRPDPSKSVISISKSTERLSPMMRDLKTNKFKKSQSIDEIDIGTYKVYNIPLENYASGNDTVGAHERVDKLLGPEHGMLSMSRSQSVPMLDDELLTYGSVKVQPQQKSSVTKKVYQFDQSFNPQGAVEVTAEKRLPPPFQLNPEYIPQQSKNLPQELVSPRAYRGYPPVEHMFSFSQPSVNEEAVSAPFVSQGSRPGFLRRADSLASSTEMSMFRRVSEPHELPPSDRYGRPPYRGAVERQSSISVSESQFLKRNGRYEDEHPSYQEVKAQTGSFPVKNLTQRRPLSARSYSTESYGTSQTRPVSARPTMAALLEKIPSDYNLGNYGDKPSDNSDIKTRPTPVKGNESCAKMPADWRQQLLRHIEARRLDRTPSQQSSILDNGQDEVPVSGQWNPYPLGRRDVPPDTVTKKAGSHIQTLMGSQSLQHRSREQQYEGNMNKVTIQQFQPPLPIQIPSSQSSRAPQTGRCLIQTKGQRSTDAYQEQFCVRIEKNPGLGFSISGGISGQGNPFKPSDKGIFVTRVQPDGPASSLLQPGDKILQANGHSFVHMEHEKAVLLLKSFQNTVDLVIQRELTV
SIO_010081: LRRC7
subclass of: SO_0000673
so part of: LRRC7
location: complement(join(1185451..1185558,1188628..1188702,1191236..1191328,1192617..1192835,1197776..1197895,1203925..1205605,1206564..1206744,1206974..1207085,1215479..1215679,1220913..1221037,1221707..1221806,1223738..1223807,1231690..1231805,1232201..1232330,1235957..1236029,1236424..1236568,1239576..1239650,1241201..1241264,1264878..1264934,1267479..1267568,1268294..1268372,1269262..1269379,1274710..1274912,1299043))
location: region:1185451-1299043:-1
so has part: feature:1299043-1299043:-1:exon
so has part: feature:1274710-1274912:-1:exon
so has part: feature:1269262-1269379:-1:exon
so has part: feature:1268294-1268372:-1:exon
so has part: feature:1267479-1267568:-1:exon
so has part: feature:1264878-1264934:-1:exon
so has part: feature:1241201-1241264:-1:exon
so has part: feature:1239576-1239650:-1:exon
so has part: feature:1236424-1236568:-1:exon
so has part: feature:1235957-1236029:-1:exon
so has part: feature:1232201-1232330:-1:exon
so has part: feature:1231690-1231805:-1:exon
so has part: feature:1223738-1223807:-1:exon
so has part: feature:1221707-1221806:-1:exon
so has part: feature:1220913-1221037:-1:exon
so has part: feature:1215479-1215679:-1:exon
so has part: feature:1206974-1207085:-1:exon
so has part: feature:1206564-1206744:-1:exon
so has part: feature:1203925-1205605:-1:exon
so has part: feature:1197776-1197895:-1:exon
so has part: feature:1192617-1192835:-1:exon
so has part: feature:1191236-1191328:-1:exon
so has part: feature:1188628-1188702:-1:exon
so has part: feature:1185451-1185558:-1:exon

XP_032047752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1299043-1299043:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274710-1274912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1269262-1269379:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1268294-1268372:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1267479-1267568:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1264878-1264934:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1241201-1241264:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1239576-1239650:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1236424-1236568:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1235957-1236029:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1232201-1232330:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1231690-1231805:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1223738-1223807:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1221707-1221806:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1220913-1221037:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1215479-1215679:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1206974-1207085:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1206564-1206744:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1203925-1205605:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1197776-1197895:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1192617-1192835:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1191236-1191328:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1188628-1188702:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1185451-1185558:-1:exon

LRRC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LRRC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 7 isoform X1
translation: MPCLEMTTKRKIIGRLVPCRCFRGEEEIVSVLDYSHCGLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTTIASLVNLRELDISKNGIQDFPENIKCCKCLTIIEASVNPVSKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLTQLERLDLGNNEFSELPEVLEQIQNLKELWMDNNSLQILPGSIGKLKQLVYLDMSKNRIETVDLDISGCEGLEDLLLSSNMLQQLPDSIGLLKRLTTLKVDDNQLTILPNAIGNLSLLEEFDCSCNELESLPSTIGYLHNLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPDEIGQMQKLRVLNLSDNRLKNLPFTFTKLKELAALWLSDNQSKALIPLQTEAHPETKQRVLTNYMFPQQPRSDEDFQSDSDSFNPTLWEEQRQQRMTVAFEFEDKKEEEENAGKVKVEINLKRYPTPYPEDLKNMVKSVQNLVGKTSHGVRPENTAPTANSEQTVKEKYEHKWPMAPKEISVEDAFGHPASEMRIGELRPSIPETPLYPPKLVLLGKEKKESTDESEADKIHCLNNSVSSGTYSDYSPSQASSGSSNAHVKMGSLQTTAKDAVNNSLWGNSRLVQSFPQPLETKPLLSQRESAPAGNLPQRNDRRPLSDTFTDSWNDSSHYDNTGFVAEESTVDNPSANPLLSTKSRSTSAHGRRPLIRQDRIVGIPLELEQPTLRNTHESEVPPPNPWQNWTRTPSPFEDRTAFPSKLENTPTTSPLPERKDHIKESPELSSTFTPGIAWEYHDSNANRSLTNVFSHIHCRPDPSKSVISISKSTERLSPMMRDLKTNKFKKSQSIDEIDIGTYKVYNIPLENYASGNDTVGAHERVDKLLGPEHGMLSMSRSQSVPMLDDELLTYGSVKVQPQQKSSVTKKVYQFDQSFNPQGAVEVTAEKRLPPPFQLNPEYIPQQSKNLPQELVSPRAYRGYPPVEHMFSFSQPSVNEEAVSAPFVSQGSRPGFLRRADSLASSTEMSMFRRVSEPHELPPSDRYGRPPYRGAVERQSSISVSESQFLKRNGRYEDEHPSYQEVKAQTGSFPVKNLTQRRPLSARSYSTESYGTSQTRPVSARPTMAALLEKIPSDYNLGNYGDKPSDNSDIKTRPTPVKGNESCAKMPADWRQQLLRHIEARRLDRTAAYKHNTVSLGMLHSGGFSAMHAGRSMTLNLQTKSKFENQMLQELPLPKTPSQQSSILDNGQDEVPVSGQWNPYPLGRRDVPPDTVTKKAGSHIQTLMGSQSLQHRSREQQYEGNMNKVTIQQFQPPLPIQIPSSQSSRAPQTGRCLIQTKGQRSTDAYQEQFCVRIEKNPGLGFSISGGISGQGNPFKPSDKGIFVTRVQPDGPASSLLQPGDKILQANGHSFVHMEHEKAVLLLKSFQNTVDLVIQRELTV
SIO_010081: LRRC7
subclass of: SO_0000673
so part of: LRRC7
location: complement(join(1185451..1185558,1188628..1188702,1191236..1191328,1192617..1192835,1197776..1197895,1202046..1202195,1203925..1205605,1206564..1206744,1206974..1207085,1215479..1215679,1220913..1221037,1221707..1221806,1223738..1223807,1231690..1231805,1232201..1232330,1235957..1236029,1236424..1236568,1239576..1239650,1241201..1241264,1264878..1264934,1267479..1267568,1268294..1268372,1269262..1269379,1274710..1274912,1299043))
location: region:1185451-1299043:-1
so has part: feature:1299043-1299043:-1:exon
so has part: feature:1274710-1274912:-1:exon
so has part: feature:1269262-1269379:-1:exon
so has part: feature:1268294-1268372:-1:exon
so has part: feature:1267479-1267568:-1:exon
so has part: feature:1264878-1264934:-1:exon
so has part: feature:1241201-1241264:-1:exon
so has part: feature:1239576-1239650:-1:exon
so has part: feature:1236424-1236568:-1:exon
so has part: feature:1235957-1236029:-1:exon
so has part: feature:1232201-1232330:-1:exon
so has part: feature:1231690-1231805:-1:exon
so has part: feature:1223738-1223807:-1:exon
so has part: feature:1221707-1221806:-1:exon
so has part: feature:1220913-1221037:-1:exon
so has part: feature:1215479-1215679:-1:exon
so has part: feature:1206974-1207085:-1:exon
so has part: feature:1206564-1206744:-1:exon
so has part: feature:1203925-1205605:-1:exon
so has part: feature:1202046-1202195:-1:exon
so has part: feature:1197776-1197895:-1:exon
so has part: feature:1192617-1192835:-1:exon
so has part: feature:1191236-1191328:-1:exon
so has part: feature:1188628-1188702:-1:exon
so has part: feature:1185451-1185558:-1:exon

XP_032047749.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1299043-1299043:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274710-1274912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1269262-1269379:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1268294-1268372:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1267479-1267568:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1264878-1264934:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1241201-1241264:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1239576-1239650:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1236424-1236568:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1235957-1236029:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1232201-1232330:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1231690-1231805:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1223738-1223807:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1221707-1221806:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1220913-1221037:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1215479-1215679:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1206974-1207085:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1206564-1206744:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1203925-1205605:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1202046-1202195:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1197776-1197895:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1192617-1192835:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1191236-1191328:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1188628-1188702:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1185451-1185558:-1:exon

LRRC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LRRC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 7 isoform X1
translation: MPCLEMTTKRKIIGRLVPCRCFRGEEEIVSVLDYSHCGLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTTIASLVNLRELDISKNGIQDFPENIKCCKCLTIIEASVNPVSKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLTQLERLDLGNNEFSELPEVLEQIQNLKELWMDNNSLQILPGSIGKLKQLVYLDMSKNRIETVDLDISGCEGLEDLLLSSNMLQQLPDSIGLLKRLTTLKVDDNQLTILPNAIGNLSLLEEFDCSCNELESLPSTIGYLHNLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPDEIGQMQKLRVLNLSDNRLKNLPFTFTKLKELAALWLSDNQSKALIPLQTEAHPETKQRVLTNYMFPQQPRSDEDFQSDSDSFNPTLWEEQRQQRMTVAFEFEDKKEEEENAGKVKVEINLKRYPTPYPEDLKNMVKSVQNLVGKTSHGVRPENTAPTANSEQTVKEKYEHKWPMAPKEISVEDAFGHPASEMRIGELRPSIPETPLYPPKLVLLGKEKKESTDESEADKIHCLNNSVSSGTYSDYSPSQASSGSSNAHVKMGSLQTTAKDAVNNSLWGNSRLVQSFPQPLETKPLLSQRESAPAGNLPQRNDRRPLSDTFTDSWNDSSHYDNTGFVAEESTVDNPSANPLLSTKSRSTSAHGRRPLIRQDRIVGIPLELEQPTLRNTHESEVPPPNPWQNWTRTPSPFEDRTAFPSKLENTPTTSPLPERKDHIKESPELSSTFTPGIAWEYHDSNANRSLTNVFSHIHCRPDPSKSVISISKSTERLSPMMRDLKTNKFKKSQSIDEIDIGTYKVYNIPLENYASGNDTVGAHERVDKLLGPEHGMLSMSRSQSVPMLDDELLTYGSVKVQPQQKSSVTKKVYQFDQSFNPQGAVEVTAEKRLPPPFQLNPEYIPQQSKNLPQELVSPRAYRGYPPVEHMFSFSQPSVNEEAVSAPFVSQGSRPGFLRRADSLASSTEMSMFRRVSEPHELPPSDRYGRPPYRGAVERQSSISVSESQFLKRNGRYEDEHPSYQEVKAQTGSFPVKNLTQRRPLSARSYSTESYGTSQTRPVSARPTMAALLEKIPSDYNLGNYGDKPSDNSDIKTRPTPVKGNESCAKMPADWRQQLLRHIEARRLDRTAAYKHNTVSLGMLHSGGFSAMHAGRSMTLNLQTKSKFENQMLQELPLPKTPSQQSSILDNGQDEVPVSGQWNPYPLGRRDVPPDTVTKKAGSHIQTLMGSQSLQHRSREQQYEGNMNKVTIQQFQPPLPIQIPSSQSSRAPQTGRCLIQTKGQRSTDAYQEQFCVRIEKNPGLGFSISGGISGQGNPFKPSDKGIFVTRVQPDGPASSLLQPGDKILQANGHSFVHMEHEKAVLLLKSFQNTVDLVIQRELTV
SIO_010081: LRRC7
subclass of: SO_0000673
so part of: LRRC7
location: complement(join(1185451..1185558,1188628..1188702,1191236..1191328,1192617..1192835,1197776..1197895,1202046..1202195,1203925..1205605,1206564..1206744,1206974..1207085,1215479..1215679,1220913..1221037,1221707..1221806,1223738..1223807,1231690..1231805,1232201..1232330,1235957..1236029,1236424..1236568,1239576..1239650,1241201..1241264,1264878..1264934,1267479..1267568,1268294..1268372,1269262..1269379,1274710..1274912,1299043))
location: region:1185451-1299043:-1
so has part: feature:1299043-1299043:-1:exon
so has part: feature:1274710-1274912:-1:exon
so has part: feature:1269262-1269379:-1:exon
so has part: feature:1268294-1268372:-1:exon
so has part: feature:1267479-1267568:-1:exon
so has part: feature:1264878-1264934:-1:exon
so has part: feature:1241201-1241264:-1:exon
so has part: feature:1239576-1239650:-1:exon
so has part: feature:1236424-1236568:-1:exon
so has part: feature:1235957-1236029:-1:exon
so has part: feature:1232201-1232330:-1:exon
so has part: feature:1231690-1231805:-1:exon
so has part: feature:1223738-1223807:-1:exon
so has part: feature:1221707-1221806:-1:exon
so has part: feature:1220913-1221037:-1:exon
so has part: feature:1215479-1215679:-1:exon
so has part: feature:1206974-1207085:-1:exon
so has part: feature:1206564-1206744:-1:exon
so has part: feature:1203925-1205605:-1:exon
so has part: feature:1202046-1202195:-1:exon
so has part: feature:1197776-1197895:-1:exon
so has part: feature:1192617-1192835:-1:exon
so has part: feature:1191236-1191328:-1:exon
so has part: feature:1188628-1188702:-1:exon
so has part: feature:1185451-1185558:-1:exon

XP_032047750.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1299043-1299043:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274710-1274912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1269262-1269379:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1268294-1268372:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1267479-1267568:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1264878-1264934:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1241201-1241264:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1239576-1239650:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1236424-1236568:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1235957-1236029:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1232201-1232330:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1231690-1231805:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1223738-1223807:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1221707-1221806:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1220913-1221037:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1215479-1215679:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1206974-1207085:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1206564-1206744:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1203925-1205605:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1202046-1202195:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1197776-1197895:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1192617-1192835:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1191236-1191328:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1188628-1188702:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1185451-1185558:-1:exon

LRRC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LRRC7
product: leucine rich repeat containing 7, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032191863.1
SIO_010081: LRRC7
subclass of: SO_0000673
so part of: LRRC7
location: complement(join(1188628..1188685,1191236..1191328,1192617..1192835,1197776..1197895,1202046..1202195,1203925..1205605,1206564..1206744,1206974..1207085,1215479..1215679,1220913..1221037,1221707..1221806,1223738..1223807,1231690..1231805,1232201..1232330,1235957..1236029,1236424..1236568,1239576..1239650,1241201..1241264,1264878..1264934,1267479..1267568,1268294..1268372,1269262..1269379,1274710..1274912,1299043..1299130,1353252..1353672))
location: region:1188628-1353672:-1
so has part: feature:1353252-1353672:-1:exon
so has part: feature:1299043-1299130:-1:exon
so has part: feature:1274710-1274912:-1:exon
so has part: feature:1269262-1269379:-1:exon
so has part: feature:1268294-1268372:-1:exon
so has part: feature:1267479-1267568:-1:exon
so has part: feature:1264878-1264934:-1:exon
so has part: feature:1241201-1241264:-1:exon
so has part: feature:1239576-1239650:-1:exon
so has part: feature:1236424-1236568:-1:exon
so has part: feature:1235957-1236029:-1:exon
so has part: feature:1232201-1232330:-1:exon
so has part: feature:1231690-1231805:-1:exon
so has part: feature:1223738-1223807:-1:exon
so has part: feature:1221707-1221806:-1:exon
so has part: feature:1220913-1221037:-1:exon
so has part: feature:1215479-1215679:-1:exon
so has part: feature:1206974-1207085:-1:exon
so has part: feature:1206564-1206744:-1:exon
so has part: feature:1203925-1205605:-1:exon
so has part: feature:1202046-1202195:-1:exon
so has part: feature:1197776-1197895:-1:exon
so has part: feature:1192617-1192835:-1:exon
so has part: feature:1191236-1191328:-1:exon
so has part: feature:1188628-1188685:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1353252-1353672:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1299043-1299130:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1274710-1274912:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1269262-1269379:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1268294-1268372:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1267479-1267568:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1264878-1264934:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1241201-1241264:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1239576-1239650:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1236424-1236568:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1235957-1236029:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1232201-1232330:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1231690-1231805:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1223738-1223807:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1221707-1221806:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1220913-1221037:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1215479-1215679:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1206974-1207085:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1206564-1206744:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1203925-1205605:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1202046-1202195:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1197776-1197895:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1192617-1192835:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1191236-1191328:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1188628-1188685:-1:exon

position:1188685:-1
position: 1188685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRRC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LRRC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 7 isoform X5
translation: MPCLEMTTKRKIIGRLVPCRCFRGEEEIVSVLDYSHCGLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTTIASLVNLRELDISKNGIQDFPENIKCCKCLTIIEASVNPVSKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLTQLERLDLGNNEFSELPEVLEQIQNLKELWMDNNSLQILPGSIGKLKQLVYLDMSKNRIETVDLDISGCEGLEDLLLSSNMLQQLPDSIGLLKRLTTLKVDDNQLTILPNAIGNLSLLEEFDCSCNELESLPSTIGYLHNLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPDEIGQMQKLRVLNLSDNRLKNLPFTFTKLKELAALWLSDNQSKALIPLQTEAHPETKQRVLTNYMFPQQPRSDEDFQSDSDSFNPTLWEEQRQQRMTVAFEFEDKKEEEENAGKVKVEINLKRYPTPYPEDLKNMVKSVQNLVGKTSHGVRPENTAPTANSEQTVKEKYEHKWPMAPKEISVEDAFGHPASEMRIGELRPSIPETPLYPPKLVLLGKEKKESTDESEADKIHCLNNSVSSGTYSDYSPSQASSGSSNAHVKMGSLQTTAKDAVNNSLWGNSRLVQSFPQPLETKPLLSQRESAPAGNLPQRNDRRPLSDTFTDSWNDSSHYDNTGFVAEESTVDNPSANPLLSTKSRSTSAHGRRPLIRQDRIVGIPLELEQPTLRNTHESEVPPPNPWQNWTRTPSPFEDRTAFPSKLENTPTTSPLPERKDHIKESPELSSTFTPGIAWEYHDSNANRSLTNVFSHIHCRPDPSKSVISISKSTERLSPMMRDLKTNKFKKSQSIDEIDIGTYKVYNIPLENYASGNDTVGAHERVDKLLGPEHGMLSMSRSQSVPMLDDELLTYGSVKVQPQQKSSVTKKVYQFDQSFNPQGAVEVTAEKRLPPPFQLNPEYIPQQSKNLPQELVSPRAYRGYPPVEHMFSFSQPSVNEEAVSAPFVSQGSRPGFLRRADSLASSTEMSMFRRVSEPHELPPSDRYGRPPYRGAVERQSSISVSESQFLKRNGRYEDEHPSYQEVKAQTGSFPVKNLTQRRPLSARSYSTESYGTSQTRPVSARPTMAALLEKIPSDYNLGNYGDKPSDNSDIKTRPTPVKGNESCAKMPADWRQQLLRHIEARRLDRTAAYKHNTVSLGMLHSGGFSAMHAGRSMTLNLQTKSKFENQMLQELPLPKTPSQQSSILDNGQDEVPVSGQWNPYPLGRRDVPPDTVTKKAGSHIQTLMGSQSLQHRSREQQYEGNMNKVTIQQFQPPLPIQIPSSQSSRAPQTGRCLIQTKGQRSTDAYQEQFCVRIEKNPGLGFSISGGISGQGNPFKPSDKGSA
SIO_010081: LRRC7
subclass of: SO_0000673
so part of: LRRC7
location: complement(join(1188674..1188685,1191236..1191328,1192617..1192835,1197776..1197895,1202046..1202195,1203925..1205605,1206564..1206744,1206974..1207085,1215479..1215679,1220913..1221037,1221707..1221806,1223738..1223807,1231690..1231805,1232201..1232330,1235957..1236029,1236424..1236568,1239576..1239650,1241201..1241264,1264878..1264934,1267479..1267568,1268294..1268372,1269262..1269379,1274710..1274912,1299043))
location: region:1188674-1299043:-1
so has part: feature:1299043-1299043:-1:exon
so has part: feature:1274710-1274912:-1:exon
so has part: feature:1269262-1269379:-1:exon
so has part: feature:1268294-1268372:-1:exon
so has part: feature:1267479-1267568:-1:exon
so has part: feature:1264878-1264934:-1:exon
so has part: feature:1241201-1241264:-1:exon
so has part: feature:1239576-1239650:-1:exon
so has part: feature:1236424-1236568:-1:exon
so has part: feature:1235957-1236029:-1:exon
so has part: feature:1232201-1232330:-1:exon
so has part: feature:1231690-1231805:-1:exon
so has part: feature:1223738-1223807:-1:exon
so has part: feature:1221707-1221806:-1:exon
so has part: feature:1220913-1221037:-1:exon
so has part: feature:1215479-1215679:-1:exon
so has part: feature:1206974-1207085:-1:exon
so has part: feature:1206564-1206744:-1:exon
so has part: feature:1203925-1205605:-1:exon
so has part: feature:1202046-1202195:-1:exon
so has part: feature:1197776-1197895:-1:exon
so has part: feature:1192617-1192835:-1:exon
so has part: feature:1191236-1191328:-1:exon
so has part: feature:1188674-1188685:-1:exon

XP_032047754.1
type: Protein
SIO_000068: ncbiprotein

position:1188674:-1
position: 1188674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1299043-1299043:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274710-1274912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1269262-1269379:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1268294-1268372:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1267479-1267568:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1264878-1264934:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1241201-1241264:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1239576-1239650:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1236424-1236568:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1235957-1236029:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1232201-1232330:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1231690-1231805:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1223738-1223807:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1221707-1221806:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1220913-1221037:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1215479-1215679:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1206974-1207085:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1206564-1206744:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1203925-1205605:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1202046-1202195:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1197776-1197895:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1192617-1192835:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1191236-1191328:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1188674-1188685:-1:exon

LRRC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LRRC7
product: leucine rich repeat containing 7, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032191864.1
SIO_010081: LRRC7
subclass of: SO_0000673
so part of: LRRC7
location: complement(join(1228029..1228082,1231690..1231805,1232201..1232330,1235957..1236029,1236424..1236568,1239576..1239650,1241201..1241264,1264878..1264934,1267479..1267568,1268294..1268372,1269262..1269379,1274710..1274912,1299043..1299130,1353252..1353671))
location: region:1228029-1353671:-1
so has part: feature:1353252-1353671:-1:exon
so has part: feature:1299043-1299130:-1:exon
so has part: feature:1274710-1274912:-1:exon
so has part: feature:1269262-1269379:-1:exon
so has part: feature:1268294-1268372:-1:exon
so has part: feature:1267479-1267568:-1:exon
so has part: feature:1264878-1264934:-1:exon
so has part: feature:1241201-1241264:-1:exon
so has part: feature:1239576-1239650:-1:exon
so has part: feature:1236424-1236568:-1:exon
so has part: feature:1235957-1236029:-1:exon
so has part: feature:1232201-1232330:-1:exon
so has part: feature:1231690-1231805:-1:exon
so has part: feature:1228029-1228082:-1:exon

position:1228029:-1
position: 1228029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1353671:-1
position: 1353671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1353252-1353671:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1299043-1299130:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1274710-1274912:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1269262-1269379:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1268294-1268372:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1267479-1267568:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1264878-1264934:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1241201-1241264:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1239576-1239650:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1236424-1236568:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1235957-1236029:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1232201-1232330:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1231690-1231805:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1228029-1228082:-1:exon

position:1228082:-1
position: 1228082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRRC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LRRC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 7 isoform X6
translation: MPCLEMTTKRKIIGRLVPCRCFRGEEEIVSVLDYSHCGLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTTIASLVNLRELDISKNGIQDFPENIKCCKCLTIIEASVNPVSKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLTQLERLDLGNNEFSELPEVLEQIQNLKELWMDNNSLQILPGSIGKLKQLVYLDMSKNRIETVDLDISGCEGLEDLLLSSNMLQQLPDSIGLLKRLTTLKVDDNQLTILPNAIGNLSLLEEFDCSCNELESLPSTIGYLHNLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPDEIGQMQKLRVLNLSDNRVLPGMSPVIER
SIO_010081: LRRC7
subclass of: SO_0000673
so part of: LRRC7
location: complement(join(1228046..1228082,1231690..1231805,1232201..1232330,1235957..1236029,1236424..1236568,1239576..1239650,1241201..1241264,1264878..1264934,1267479..1267568,1268294..1268372,1269262..1269379,1274710..1274912,1299043))
location: region:1228046-1299043:-1
so has part: feature:1299043-1299043:-1:exon
so has part: feature:1274710-1274912:-1:exon
so has part: feature:1269262-1269379:-1:exon
so has part: feature:1268294-1268372:-1:exon
so has part: feature:1267479-1267568:-1:exon
so has part: feature:1264878-1264934:-1:exon
so has part: feature:1241201-1241264:-1:exon
so has part: feature:1239576-1239650:-1:exon
so has part: feature:1236424-1236568:-1:exon
so has part: feature:1235957-1236029:-1:exon
so has part: feature:1232201-1232330:-1:exon
so has part: feature:1231690-1231805:-1:exon
so has part: feature:1228046-1228082:-1:exon

XP_032047755.1
type: Protein
SIO_000068: ncbiprotein

position:1228046:-1
position: 1228046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1299043-1299043:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274710-1274912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1269262-1269379:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1268294-1268372:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1267479-1267568:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1264878-1264934:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1241201-1241264:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1239576-1239650:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1236424-1236568:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1235957-1236029:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1232201-1232330:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1231690-1231805:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1228046-1228082:-1:exon

LRRC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LRRC7
product: leucine rich repeat containing 7, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032191866.1
SIO_010081: LRRC7
subclass of: SO_0000673
so part of: LRRC7
location: complement(join(1245879..1248869,1264878..1264934,1267479..1267568,1268294..1268372,1269262..1269379,1274710..1274912,1299043..1299130,1353252..1353322))
location: region:1245879-1353322:-1
so has part: feature:1353252-1353322:-1:exon
so has part: feature:1299043-1299130:-1:exon
so has part: feature:1274710-1274912:-1:exon
so has part: feature:1269262-1269379:-1:exon
so has part: feature:1268294-1268372:-1:exon
so has part: feature:1267479-1267568:-1:exon
so has part: feature:1264878-1264934:-1:exon
so has part: feature:1245879-1248869:-1:exon

position:1245879:-1
position: 1245879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1353322:-1
position: 1353322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1353252-1353322:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1299043-1299130:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1274710-1274912:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1269262-1269379:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1268294-1268372:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1267479-1267568:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1264878-1264934:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1245879-1248869:-1:exon

position:1248869:-1
position: 1248869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRRC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LRRC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 7 isoform X8
translation: MPCLEMTTKRKIIGRLVPCRCFRGEEEIVSVLDYSHCGLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTTIASLVNLRELDISKNGIQDFPENIKCCKCLTIIEASVNPVSKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPNI
SIO_010081: LRRC7
subclass of: SO_0000673
so part of: LRRC7
location: complement(join(1248863..1248869,1264878..1264934,1267479..1267568,1268294..1268372,1269262..1269379,1274710..1274912,1299043))
location: region:1248863-1299043:-1
so has part: feature:1299043-1299043:-1:exon
so has part: feature:1274710-1274912:-1:exon
so has part: feature:1269262-1269379:-1:exon
so has part: feature:1268294-1268372:-1:exon
so has part: feature:1267479-1267568:-1:exon
so has part: feature:1264878-1264934:-1:exon
so has part: feature:1248863-1248869:-1:exon

XP_032047757.1
type: Protein
SIO_000068: ncbiprotein

position:1248863:-1
position: 1248863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1299043-1299043:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274710-1274912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1269262-1269379:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1268294-1268372:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1267479-1267568:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1264878-1264934:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1248863-1248869:-1:exon

LRRC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LRRC7
product: leucine rich repeat containing 7, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032191865.1
SIO_010081: LRRC7
subclass of: SO_0000673
so part of: LRRC7
location: complement(join(1253120..1253208,1264878..1264934,1267479..1267568,1268294..1268372,1269262..1269379,1274710..1274912,1299043..1299130,1353252..1353667))
location: region:1253120-1353667:-1
so has part: feature:1353252-1353667:-1:exon
so has part: feature:1299043-1299130:-1:exon
so has part: feature:1274710-1274912:-1:exon
so has part: feature:1269262-1269379:-1:exon
so has part: feature:1268294-1268372:-1:exon
so has part: feature:1267479-1267568:-1:exon
so has part: feature:1264878-1264934:-1:exon
so has part: feature:1253120-1253208:-1:exon

position:1253120:-1
position: 1253120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1353667:-1
position: 1353667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1353252-1353667:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1299043-1299130:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1274710-1274912:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1269262-1269379:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1268294-1268372:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1267479-1267568:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1264878-1264934:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1253120-1253208:-1:exon

position:1253208:-1
position: 1253208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRRC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LRRC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 7 isoform X7
translation: MPCLEMTTKRKIIGRLVPCRCFRGEEEIVSVLDYSHCGLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTTIASLVNLRELDISKNGIQDFPENIKCCKCLTIIEASVNPVSKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPNYTRTLSSSQDIEAKDTKSSS
SIO_010081: LRRC7
subclass of: SO_0000673
so part of: LRRC7
location: complement(join(1253145..1253208,1264878..1264934,1267479..1267568,1268294..1268372,1269262..1269379,1274710..1274912,1299043))
location: region:1253145-1299043:-1
so has part: feature:1299043-1299043:-1:exon
so has part: feature:1274710-1274912:-1:exon
so has part: feature:1269262-1269379:-1:exon
so has part: feature:1268294-1268372:-1:exon
so has part: feature:1267479-1267568:-1:exon
so has part: feature:1264878-1264934:-1:exon
so has part: feature:1253145-1253208:-1:exon

XP_032047756.1
type: Protein
SIO_000068: ncbiprotein

position:1253145:-1
position: 1253145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1299043-1299043:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274710-1274912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1269262-1269379:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1268294-1268372:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1267479-1267568:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1264878-1264934:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1253145-1253208:-1:exon

DEPDC1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: DEPDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1422446..1434392
location: region:1422446-1434392:1
so has part: feature:1422446-1434392:1:exon
subclass of: SO_0000010

116491979
type: Gene
SIO_000068: ncbigene

position:1422446:1
position: 1422446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1434392:1
position: 1434392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1422446-1434392:1:exon

DEPDC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: DEPDC1
product: DEP domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032192379.1
SIO_010081: DEPDC1
subclass of: SO_0000673
so part of: DEPDC1
location: join(1422446..1422490,1422899..1423164,1423791..1423941,1425050..1425168,1425609..1425739,1426070..1426117,1427502..1427642,1428133..1428993,1429623..1429795,1430856..1431032,1431313..1431498,1433208..1434392)
location: region:1422446-1434392:1
so has part: feature:1422446-1422490:1:exon
so has part: feature:1422899-1423164:1:exon
so has part: feature:1423791-1423941:1:exon
so has part: feature:1425050-1425168:1:exon
so has part: feature:1425609-1425739:1:exon
so has part: feature:1426070-1426117:1:exon
so has part: feature:1427502-1427642:1:exon
so has part: feature:1428133-1428993:1:exon
so has part: feature:1429623-1429795:1:exon
so has part: feature:1430856-1431032:1:exon
so has part: feature:1431313-1431498:1:exon
so has part: feature:1433208-1434392:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1422446-1422490:1:exon

position:1422490:1
position: 1422490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1422899-1423164:1:exon

position:1422899:1
position: 1422899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1423164:1
position: 1423164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1423791-1423941:1:exon

position:1423791:1
position: 1423791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1423941:1
position: 1423941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1425050-1425168:1:exon

position:1425050:1
position: 1425050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1425168:1
position: 1425168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1425609-1425739:1:exon

position:1425609:1
position: 1425609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1425739:1
position: 1425739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1426070-1426117:1:exon

position:1426070:1
position: 1426070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1426117:1
position: 1426117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1427502-1427642:1:exon

position:1427502:1
position: 1427502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1427642:1
position: 1427642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1428133-1428993:1:exon

position:1428133:1
position: 1428133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1428993:1
position: 1428993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1429623-1429795:1:exon

position:1429623:1
position: 1429623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1429795:1
position: 1429795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1430856-1431032:1:exon

position:1430856:1
position: 1430856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1431032:1
position: 1431032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1431313-1431498:1:exon

position:1431313:1
position: 1431313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1431498:1
position: 1431498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1433208-1434392:1:exon

position:1433208:1
position: 1433208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DEPDC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: DEPDC1
product: DEP domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032192380.1
SIO_010081: DEPDC1
subclass of: SO_0000673
so part of: DEPDC1
location: join(1422446..1422490,1422899..1423164,1423791..1423941,1425050..1425168,1425609..1425739,1426070..1426117,1427502..1427642,1429623..1429795,1430856..1431032,1431313..1431498,1433208..1434392)
location: region:1422446-1434392:1
so has part: feature:1422446-1422490:1:exon
so has part: feature:1422899-1423164:1:exon
so has part: feature:1423791-1423941:1:exon
so has part: feature:1425050-1425168:1:exon
so has part: feature:1425609-1425739:1:exon
so has part: feature:1426070-1426117:1:exon
so has part: feature:1427502-1427642:1:exon
so has part: feature:1429623-1429795:1:exon
so has part: feature:1430856-1431032:1:exon
so has part: feature:1431313-1431498:1:exon
so has part: feature:1433208-1434392:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1422446-1422490:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1422899-1423164:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1423791-1423941:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1425050-1425168:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1425609-1425739:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1426070-1426117:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1427502-1427642:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1429623-1429795:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1430856-1431032:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1431313-1431498:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1433208-1434392:1:exon

DEPDC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: DEPDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DEP domain-containing protein 1A isoform X1
translation: MEGEARPGPYRATRLWNEITRYFRAGMPLRKHRQRFKKHGSCFTASEAVDWLHEVLRSNSNFGPEVSRQQTVQLLRKFLKNHVIEDIKGRWGSEDLEDNGVLYRFPSTSPVKPLPSSRREKENLETFSRDKERLFKLPHLSRRTVKKHELLDSLENLEKTEPDITKENKEDELHRKEISQEYVQEIWRNIILIHLQTILGLPSLEEVLQPTQIVPEYVIYNMTNTSKHGVVILQNKSEDLPHWVLSAMKCLAYWPRNNDMNQPTYSGFERDVFRTVADYFLNLPEPLLTFEYYELFVNILVMCGYIKIPDLSSRKHSVQDETCDPQPSKLLHLNSFKSTECLLLSLLRKEPEKKKKEYEVSRKWSAEESAVQKQCAKKLQQYKLRSEQGSADNLIGGSCQNLSGFRNEQDPALRFRTRCYSLERIGGTASSVRNKGESVVLRQTDVNTVLGIRSKNQSLPYEHKANSALAFGFDDTYQNQTYGVKTASASTLQDKELLDENHRSKEICRSQSLLGSRNSKSCTSINIPVAEITVKPTSQLCGQRKPNASVDIGTEVSDITVSKRLCKSTIELSEYSFTHSCMLTGTQNLLQPHLERIAVEALQICCLLLPPPNRRKMQLLMRMISRISENVDMPRLHDAMGTRSLMIQTFSRCVLCCAEEVDLDELLSTRLVSFLMDHQQEIFKVPTYLQVAVQDHIEYVRMAQGKYPREEICAILPTYSYCKQITPQEFEEQKVSTSQAAVAELLENIIKDKNLSVKDKKKKLKQFQKEYPLIYQNRFPTTENEAILFENKPTIKQPMLSLRKPKFRSLRY
SIO_010081: DEPDC1
subclass of: SO_0000673
so part of: DEPDC1
location: join(1422446..1422490,1422899..1423164,1423791..1423941,1425050..1425168,1425609..1425739,1426070..1426117,1427502..1427642,1428133..1428993,1429623..1429795,1430856..1431032,1431313..1431498,1433208..1433348)
location: region:1422446-1433348:1
so has part: feature:1422446-1422490:1:exon
so has part: feature:1422899-1423164:1:exon
so has part: feature:1423791-1423941:1:exon
so has part: feature:1425050-1425168:1:exon
so has part: feature:1425609-1425739:1:exon
so has part: feature:1426070-1426117:1:exon
so has part: feature:1427502-1427642:1:exon
so has part: feature:1428133-1428993:1:exon
so has part: feature:1429623-1429795:1:exon
so has part: feature:1430856-1431032:1:exon
so has part: feature:1431313-1431498:1:exon
so has part: feature:1433208-1433348:1:exon

XP_032048270.1
type: Protein
SIO_000068: ncbiprotein

position:1433348:1
position: 1433348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1422446-1422490:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1422899-1423164:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1423791-1423941:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1425050-1425168:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1425609-1425739:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1426070-1426117:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1427502-1427642:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1428133-1428993:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1429623-1429795:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1430856-1431032:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1431313-1431498:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1433208-1433348:1:exon

DEPDC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: DEPDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DEP domain-containing protein 1A isoform X2
translation: MEGEARPGPYRATRLWNEITRYFRAGMPLRKHRQRFKKHGSCFTASEAVDWLHEVLRSNSNFGPEVSRQQTVQLLRKFLKNHVIEDIKGRWGSEDLEDNGVLYRFPSTSPVKPLPSSRREKENLETFSRDKERLFKLPHLSRRTVKKHELLDSLENLEKTEPDITKENKEDELHRKEISQEYVQEIWRNIILIHLQTILGLPSLEEVLQPTQIVPEYVIYNMTNTSKHGVVILQNKSEDLPHWVLSAMKCLAYWPRNNDMNQPTYSGFERDVFRTVADYFLNLPEPLLTFEYYELFVNILDLLQPHLERIAVEALQICCLLLPPPNRRKMQLLMRMISRISENVDMPRLHDAMGTRSLMIQTFSRCVLCCAEEVDLDELLSTRLVSFLMDHQQEIFKVPTYLQVAVQDHIEYVRMAQGKYPREEICAILPTYSYCKQITPQEFEEQKVSTSQAAVAELLENIIKDKNLSVKDKKKKLKQFQKEYPLIYQNRFPTTENEAILFENKPTIKQPMLSLRKPKFRSLRY
SIO_010081: DEPDC1
subclass of: SO_0000673
so part of: DEPDC1
location: join(1422446..1422490,1422899..1423164,1423791..1423941,1425050..1425168,1425609..1425739,1426070..1426117,1427502..1427642,1429623..1429795,1430856..1431032,1431313..1431498,1433208..1433348)
location: region:1422446-1433348:1
so has part: feature:1422446-1422490:1:exon
so has part: feature:1422899-1423164:1:exon
so has part: feature:1423791-1423941:1:exon
so has part: feature:1425050-1425168:1:exon
so has part: feature:1425609-1425739:1:exon
so has part: feature:1426070-1426117:1:exon
so has part: feature:1427502-1427642:1:exon
so has part: feature:1429623-1429795:1:exon
so has part: feature:1430856-1431032:1:exon
so has part: feature:1431313-1431498:1:exon
so has part: feature:1433208-1433348:1:exon

XP_032048271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1422446-1422490:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1422899-1423164:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1423791-1423941:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1425050-1425168:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1425609-1425739:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1426070-1426117:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1427502-1427642:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1429623-1429795:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1430856-1431032:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1431313-1431498:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1433208-1433348:1:exon

RPE65
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: RPE65
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1439069..1444811
location: region:1439069-1444811:1
so has part: feature:1439069-1444811:1:exon
subclass of: SO_0000010

116492222
type: Gene
SIO_000068: ncbigene

position:1439069:1
position: 1439069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1444811:1
position: 1444811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1439069-1444811:1:exon

RPE65
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: RPE65
product: retinoid isomerohydrolase RPE65
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 6% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032192795.1
SIO_010081: RPE65
subclass of: SO_0000673
so part of: RPE65
location: join(1439069..1439079,1439586..1439668,1440105..1440255,1440783..1440890,1440983..1441124,1441404..1441551,1441826..1441907,1442240..1442372,1442460..1442599,1443143..1443272,1443536..1443650,1443746..1443840,1443944..1444055,1444660..1444811)
location: region:1439069-1444811:1
so has part: feature:1439069-1439079:1:exon
so has part: feature:1439586-1439668:1:exon
so has part: feature:1440105-1440255:1:exon
so has part: feature:1440783-1440890:1:exon
so has part: feature:1440983-1441124:1:exon
so has part: feature:1441404-1441551:1:exon
so has part: feature:1441826-1441907:1:exon
so has part: feature:1442240-1442372:1:exon
so has part: feature:1442460-1442599:1:exon
so has part: feature:1443143-1443272:1:exon
so has part: feature:1443536-1443650:1:exon
so has part: feature:1443746-1443840:1:exon
so has part: feature:1443944-1444055:1:exon
so has part: feature:1444660-1444811:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1439069-1439079:1:exon

position:1439079:1
position: 1439079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1439586-1439668:1:exon

position:1439586:1
position: 1439586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1439668:1
position: 1439668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1440105-1440255:1:exon

position:1440105:1
position: 1440105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1440255:1
position: 1440255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1440783-1440890:1:exon

position:1440783:1
position: 1440783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1440890:1
position: 1440890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1440983-1441124:1:exon

position:1440983:1
position: 1440983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1441124:1
position: 1441124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1441404-1441551:1:exon

position:1441404:1
position: 1441404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1441551:1
position: 1441551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1441826-1441907:1:exon

position:1441826:1
position: 1441826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1441907:1
position: 1441907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1442240-1442372:1:exon

position:1442240:1
position: 1442240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1442372:1
position: 1442372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1442460-1442599:1:exon

position:1442460:1
position: 1442460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1442599:1
position: 1442599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1443143-1443272:1:exon

position:1443143:1
position: 1443143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1443272:1
position: 1443272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1443536-1443650:1:exon

position:1443536:1
position: 1443536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1443650:1
position: 1443650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1443746-1443840:1:exon

position:1443746:1
position: 1443746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1443840:1
position: 1443840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1443944-1444055:1:exon

position:1443944:1
position: 1443944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1444055:1
position: 1444055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1444660-1444811:1:exon

position:1444660:1
position: 1444660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPE65
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: RPE65
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinoid isomerohydrolase
translation: MYSQVEHPAGGYKKLFETVEELSSPVTAHVTGRIPTWLRGSLLRCGPGLFEVGAEPFYHLFDGQALLHKFDFKEGHVTYHRRFVRTDAYVRAMTEKRIVITEFGTYAYPDPCKNIFSRFFSYFKGVEVTDNALVNVYPVGEDYYACTETNFITRINPDTLETIKQVDLCKYVSVNGATAHPHVENDGTVYNIGNCFGKNFSLAYNIIRIPPLQADKEDPMNKAEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLLKFLSSWSLWGANYMDCFESNETMGVWLHVAEKKKGRLLNIKYRTSAFNLFHHINTYEDNGFLIVDLCTWKGFEFVYNYLYLANLRANWDEVKRQAEKAPQPEARRYVLPLNIDKADTGKNLVTLPYTTATATLRSDETIWLEPEVIFSGPRHAFEFPQINYKKYGGKPYTYTYGLGLNHFVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVPHPDALEEDDGVVLSIVISPGTGPKPAYLLILNAKDMSEVARAEVEVNIPVTFHGLFKRA
SIO_010081: RPE65
subclass of: SO_0000673
so part of: RPE65
location: join(1439069..1439079,1439586..1439668,1440105..1440255,1440783..1440890,1440983..1441124,1441404..1441551,1441826..1441907,1442240..1442372,1442460..1442599,1443143..1443272,1443536..1443650,1443746..1443840,1443944..1444055,1444660..1444811)
location: region:1439069-1444811:1
so has part: feature:1439069-1439079:1:exon
so has part: feature:1439586-1439668:1:exon
so has part: feature:1440105-1440255:1:exon
so has part: feature:1440783-1440890:1:exon
so has part: feature:1440983-1441124:1:exon
so has part: feature:1441404-1441551:1:exon
so has part: feature:1441826-1441907:1:exon
so has part: feature:1442240-1442372:1:exon
so has part: feature:1442460-1442599:1:exon
so has part: feature:1443143-1443272:1:exon
so has part: feature:1443536-1443650:1:exon
so has part: feature:1443746-1443840:1:exon
so has part: feature:1443944-1444055:1:exon
so has part: feature:1444660-1444811:1:exon

XP_032048686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1439069-1439079:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1439586-1439668:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1440105-1440255:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1440783-1440890:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1440983-1441124:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1441404-1441551:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1441826-1441907:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1442240-1442372:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1442460-1442599:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1443143-1443272:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1443536-1443650:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1443746-1443840:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1443944-1444055:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1444660-1444811:1:exon

LOC116491982
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LOC116491982
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1445602..1458282)
location: region:1445602-1458282:-1
so has part: feature:1445602-1458282:-1:exon
subclass of: SO_0000010

116491982
type: Gene
SIO_000068: ncbigene

position:1445602:-1
position: 1445602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1458282:-1
position: 1458282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1445602-1458282:-1:exon

LOC116491982
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LOC116491982
product: methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032192382.1
SIO_010081: LOC116491982
subclass of: SO_0000673
so part of: LOC116491982
location: complement(join(1445602..1445795,1447471..1447552,1448029..1448174,1448796..1448918,1449676..1449832,1450385..1450476,1451488..1451680,1452624..1452802,1453246..1453326,1454282..1454460,1455570..1455766,1457466..1457789,1458254..1458282))
location: region:1445602-1458282:-1
so has part: feature:1458254-1458282:-1:exon
so has part: feature:1457466-1457789:-1:exon
so has part: feature:1455570-1455766:-1:exon
so has part: feature:1454282-1454460:-1:exon
so has part: feature:1453246-1453326:-1:exon
so has part: feature:1452624-1452802:-1:exon
so has part: feature:1451488-1451680:-1:exon
so has part: feature:1450385-1450476:-1:exon
so has part: feature:1449676-1449832:-1:exon
so has part: feature:1448796-1448918:-1:exon
so has part: feature:1448029-1448174:-1:exon
so has part: feature:1447471-1447552:-1:exon
so has part: feature:1445602-1445795:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1458254-1458282:-1:exon

position:1458254:-1
position: 1458254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1457466-1457789:-1:exon

position:1457466:-1
position: 1457466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1457789:-1
position: 1457789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1455570-1455766:-1:exon

position:1455570:-1
position: 1455570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1455766:-1
position: 1455766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1454282-1454460:-1:exon

position:1454282:-1
position: 1454282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1454460:-1
position: 1454460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1453246-1453326:-1:exon

position:1453246:-1
position: 1453246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1453326:-1
position: 1453326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1452624-1452802:-1:exon

position:1452624:-1
position: 1452624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1452802:-1
position: 1452802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1451488-1451680:-1:exon

position:1451488:-1
position: 1451488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1451680:-1
position: 1451680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1450385-1450476:-1:exon

position:1450385:-1
position: 1450385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1450476:-1
position: 1450476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1449676-1449832:-1:exon

position:1449676:-1
position: 1449676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1449832:-1
position: 1449832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1448796-1448918:-1:exon

position:1448796:-1
position: 1448796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1448918:-1
position: 1448918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1448029-1448174:-1:exon

position:1448029:-1
position: 1448029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1448174:-1
position: 1448174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1447471-1447552:-1:exon

position:1447471:-1
position: 1447471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1447552:-1
position: 1447552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1445602-1445795:-1:exon

position:1445795:-1
position: 1445795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116491982
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LOC116491982
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like
translation: MWNNLTFCSVCKLAPKPTPLLLPRFLPLAHVFKRRCKGLSGSKHPAQTLQSEGLKRTCSLLPARLVSSKAKCRRYAKTYPVLDGRVLSVYRHVFEENLRNSEAVVKRYSELLDLVSKGGGENAILRHTQRNKKLFVRERLKLLLDDESFLELSPLAGLNMPYGDVPAAGCLTGIGKICGVWCVFTANDATVKGGTIYPIGVKKQLRAQEIAMQNRLLSVYLVDSGGAFLPLQSELFPDKSHGGRVFYNEAIMSAMKIPQVAVVCGSCVAGGAYVPTMAEEAVIIDKIGTLFLAGPPLVKAATGEYVSPEDLGGAKLHSRVSGCSDHFASSEKEAYECVRNVISTLNYEPLPEELTEHDSPLYSSDELLGLAPRDYRCTLPVKLILSRLLDGSRFQEFKADYGTTLVTGFGHVEGHLVGVVASNGELTHDASLKGSHFVQLCSHRSIPILFFQNTAPHAAEPTSISQAEAHSNRLKAQASMMAAVACASVPKITIVIGGCYGSESYVMCGRSFSPNFLFLWPNARVALVDSRHLTTVPQAGGSDSTDESELKHLKQRLEEESSAFYSSARLWDDGIILPQNTRKVIAQCLQIIEQQKYQVVPSYQHPVIRM
SIO_010081: LOC116491982
subclass of: SO_0000673
so part of: LOC116491982
location: complement(join(1445712..1445795,1447471..1447552,1448029..1448174,1448796..1448918,1449676..1449832,1450385..1450476,1451488..1451680,1452624..1452802,1453246..1453326,1454282..1454460,1455570..1455766,1457466..1457785))
location: region:1445712-1457785:-1
so has part: feature:1457466-1457785:-1:exon
so has part: feature:1455570-1455766:-1:exon
so has part: feature:1454282-1454460:-1:exon
so has part: feature:1453246-1453326:-1:exon
so has part: feature:1452624-1452802:-1:exon
so has part: feature:1451488-1451680:-1:exon
so has part: feature:1450385-1450476:-1:exon
so has part: feature:1449676-1449832:-1:exon
so has part: feature:1448796-1448918:-1:exon
so has part: feature:1448029-1448174:-1:exon
so has part: feature:1447471-1447552:-1:exon
so has part: feature:1445712-1445795:-1:exon

XP_032048273.1
type: Protein
SIO_000068: ncbiprotein

position:1445712:-1
position: 1445712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1457785:-1
position: 1457785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1457466-1457785:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1455570-1455766:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1454282-1454460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1453246-1453326:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1452624-1452802:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1451488-1451680:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1450385-1450476:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1449676-1449832:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1448796-1448918:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1448029-1448174:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1447471-1447552:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1445712-1445795:-1:exon

WLS
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: WLS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1483096..1512615
location: region:1483096-1512615:1
so has part: feature:1483096-1512615:1:exon
subclass of: SO_0000010

116491797
type: Gene
SIO_000068: ncbigene

position:1483096:1
position: 1483096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1512615:1
position: 1512615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1483096-1512615:1:exon

WLS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: WLS
product: Wnt ligand secretion mediator
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032192092.1
SIO_010081: WLS
subclass of: SO_0000673
so part of: WLS
location: join(1483096..1483253,1494607..1494879,1502565..1502689,1503434..1503595,1504443..1504579,1504977..1505145,1505338..1505435,1505738..1505801,1506156..1506299,1507989..1508072,1509588..1509741,1510293..1512615)
location: region:1483096-1512615:1
so has part: feature:1483096-1483253:1:exon
so has part: feature:1494607-1494879:1:exon
so has part: feature:1502565-1502689:1:exon
so has part: feature:1503434-1503595:1:exon
so has part: feature:1504443-1504579:1:exon
so has part: feature:1504977-1505145:1:exon
so has part: feature:1505338-1505435:1:exon
so has part: feature:1505738-1505801:1:exon
so has part: feature:1506156-1506299:1:exon
so has part: feature:1507989-1508072:1:exon
so has part: feature:1509588-1509741:1:exon
so has part: feature:1510293-1512615:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1483096-1483253:1:exon

position:1483253:1
position: 1483253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1494607-1494879:1:exon

position:1494607:1
position: 1494607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1494879:1
position: 1494879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1502565-1502689:1:exon

position:1502565:1
position: 1502565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1502689:1
position: 1502689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1503434-1503595:1:exon

position:1503434:1
position: 1503434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1503595:1
position: 1503595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1504443-1504579:1:exon

position:1504443:1
position: 1504443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1504579:1
position: 1504579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1504977-1505145:1:exon

position:1504977:1
position: 1504977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1505145:1
position: 1505145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1505338-1505435:1:exon

position:1505338:1
position: 1505338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1505435:1
position: 1505435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1505738-1505801:1:exon

position:1505738:1
position: 1505738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1505801:1
position: 1505801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1506156-1506299:1:exon

position:1506156:1
position: 1506156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1506299:1
position: 1506299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1507989-1508072:1:exon

position:1507989:1
position: 1507989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1508072:1
position: 1508072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1509588-1509741:1:exon

position:1509588:1
position: 1509588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1509741:1
position: 1509741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1510293-1512615:1:exon

position:1510293:1
position: 1510293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WLS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: WLS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein wntless homolog
translation: MAGAIIENMSTKKLCIVGGVLLVFQVIAFLVGGLIAPSPTTAVPYMSVKCIDVRKNHHKTKWLMPWGPNHCEKLKDFDEAVSRQIEANDIVFAVHIPLPSKEMSPWFQFMLFIMQLDIAFKMDNDLKENAEITLDVSLAYRDNMFDEWEEIAHAIEIRKLKCTFGSPKTLESEGRHYDCDFLPFMEIGSVAHKYYLINIRLPVNERKGINVGIGEIKDIRLVGIHQNGGFTKVWFAMKTFLTPSILIIMIWYWRRITLMTRAPVLLEKVIFALGISMTFINIPVEWFSIGFDWTWMLLFGDIRQGIFYAMLLSFWIIFCGEHMMDQNERNRLSGYWKQVGPIAVGSFCLFIFDMCERGVQLKNPFYSIWTTEVGTELAMAFIIVAGICLCLYFLFLCFMVFQVFRNINGKQSSLPAMSKVRCLHYEGLIFRFKFLMLITLACAAMTVIFFIVSQVTEGHWKWGDITIQVNSAFFTGIYGMWNLYVFALMFLYAPSHKNYGEDQSNGDLGVGSGEELQLTTTITHVDGPTEVYKLARKEAQE
SIO_010081: WLS
subclass of: SO_0000673
so part of: WLS
location: join(1483148..1483253,1494607..1494879,1502565..1502689,1503434..1503595,1504443..1504579,1504977..1505145,1505338..1505435,1505738..1505801,1506156..1506299,1507989..1508072,1509588..1509741,1510293..1510402)
location: region:1483148-1510402:1
so has part: feature:1483148-1483253:1:exon
so has part: feature:1494607-1494879:1:exon
so has part: feature:1502565-1502689:1:exon
so has part: feature:1503434-1503595:1:exon
so has part: feature:1504443-1504579:1:exon
so has part: feature:1504977-1505145:1:exon
so has part: feature:1505338-1505435:1:exon
so has part: feature:1505738-1505801:1:exon
so has part: feature:1506156-1506299:1:exon
so has part: feature:1507989-1508072:1:exon
so has part: feature:1509588-1509741:1:exon
so has part: feature:1510293-1510402:1:exon

XP_032047983.1
type: Protein
SIO_000068: ncbiprotein

position:1483148:1
position: 1483148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1510402:1
position: 1510402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1483148-1483253:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1494607-1494879:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1502565-1502689:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1503434-1503595:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1504443-1504579:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1504977-1505145:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1505338-1505435:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1505738-1505801:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1506156-1506299:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1507989-1508072:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1509588-1509741:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1510293-1510402:1:exon

DIRAS3
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: DIRAS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1517190..1518679
location: region:1517190-1518679:1
so has part: feature:1517190-1518679:1:exon
subclass of: SO_0000010

116492200
type: Gene
SIO_000068: ncbigene

position:1517190:1
position: 1517190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1518679:1
position: 1518679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1517190-1518679:1:exon

DIRAS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: DIRAS3
product: DIRAS family GTPase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032192763.1
SIO_010081: DIRAS3
subclass of: SO_0000673
so part of: DIRAS3
location: join(1517190..1517266,1517424..1518679)
location: region:1517190-1518679:1
so has part: feature:1517190-1517266:1:exon
so has part: feature:1517424-1518679:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1517190-1517266:1:exon

position:1517266:1
position: 1517266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1517424-1518679:1:exon

position:1517424:1
position: 1517424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DIRAS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: DIRAS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTP-binding protein Di-Ras3
translation: MPEQSNDYRVVVFGAAGVGKSSLVLRFVRGTFRETYIPTIEDTYRQVISCDKSICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSVTSRQSMEDLQPIFEQICQIKGDVQKIPIMLVGNKSDETQRELDASEGEALASKWKCSFMETSAKMNYNVQELFQELLNLEKRRTVSLQVDGKKSKQQKKKDKLKGKCSVM
SIO_010081: DIRAS3
subclass of: SO_0000673
so part of: DIRAS3
location: 1517507..1518103
location: region:1517507-1518103:1
so has part: feature:1517507-1518103:1:exon

XP_032048654.1
type: Protein
SIO_000068: ncbiprotein

position:1517507:1
position: 1517507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1518103:1
position: 1518103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1517507-1518103:1:exon

GNG12
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: GNG12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1529515..1543320
location: region:1529515-1543320:1
so has part: feature:1529515-1543320:1:exon
subclass of: SO_0000010

116492131
type: Gene
SIO_000068: ncbigene

position:1529515:1
position: 1529515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1543320:1
position: 1543320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1529515-1543320:1:exon

GNG12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: GNG12
product: G protein subunit gamma 12, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032192626.1
SIO_010081: GNG12
subclass of: SO_0000673
so part of: GNG12
location: join(1529515..1529651,1534583..1534640,1535021..1535039,1540803..1540919,1541951..1543320)
location: region:1529515-1543320:1
so has part: feature:1529515-1529651:1:exon
so has part: feature:1534583-1534640:1:exon
so has part: feature:1535021-1535039:1:exon
so has part: feature:1540803-1540919:1:exon
so has part: feature:1541951-1543320:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1529515-1529651:1:exon

position:1529651:1
position: 1529651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1534583-1534640:1:exon

position:1534583:1
position: 1534583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1534640:1
position: 1534640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1535021-1535039:1:exon

position:1535021:1
position: 1535021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1535039:1
position: 1535039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1540803-1540919:1:exon

position:1540803:1
position: 1540803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1540919:1
position: 1540919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1541951-1543320:1:exon

position:1541951:1
position: 1541951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GNG12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: GNG12
product: G protein subunit gamma 12, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032192623.1
SIO_010081: GNG12
subclass of: SO_0000673
so part of: GNG12
location: join(1529516..1529651,1534583..1534640,1535021..1535145,1540803..1540919,1541951..1543320)
location: region:1529516-1543320:1
so has part: feature:1529516-1529651:1:exon
so has part: feature:1534583-1534640:1:exon
so has part: feature:1535021-1535145:1:exon
so has part: feature:1540803-1540919:1:exon
so has part: feature:1541951-1543320:1:exon

position:1529516:1
position: 1529516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1529516-1529651:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1534583-1534640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1535021-1535145:1:exon

position:1535145:1
position: 1535145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1540803-1540919:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1541951-1543320:1:exon

GNG12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: GNG12
product: G protein subunit gamma 12, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032192625.1
SIO_010081: GNG12
subclass of: SO_0000673
so part of: GNG12
location: join(1529516..1529651,1534583..1534640,1535021..1535126,1540803..1540919,1541951..1543320)
location: region:1529516-1543320:1
so has part: feature:1529516-1529651:1:exon
so has part: feature:1534583-1534640:1:exon
so has part: feature:1535021-1535126:1:exon
so has part: feature:1540803-1540919:1:exon
so has part: feature:1541951-1543320:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1529516-1529651:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1534583-1534640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1535021-1535126:1:exon

position:1535126:1
position: 1535126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1540803-1540919:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1541951-1543320:1:exon

GNG12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: GNG12
product: G protein subunit gamma 12, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032192622.1
SIO_010081: GNG12
subclass of: SO_0000673
so part of: GNG12
location: join(1535204..1535345,1540803..1540919,1541951..1543320)
location: region:1535204-1543320:1
so has part: feature:1535204-1535345:1:exon
so has part: feature:1540803-1540919:1:exon
so has part: feature:1541951-1543320:1:exon

position:1535204:1
position: 1535204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1535204-1535345:1:exon

position:1535345:1
position: 1535345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1540803-1540919:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1541951-1543320:1:exon

GNG12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: GNG12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 isoform X1
translation: MFLKSASGSLKMSGKTASTTNNIAQARRTVQQLRIEASIERIKVSKASADLMLYCEEHAKKDPLLMGIPASENPFKDKKTCVLL
SIO_010081: GNG12
subclass of: SO_0000673
so part of: GNG12
location: join(1535334..1535345,1540803..1540919,1541951..1542076)
location: region:1535334-1542076:1
so has part: feature:1535334-1535345:1:exon
so has part: feature:1540803-1540919:1:exon
so has part: feature:1541951-1542076:1:exon

XP_032048513.1
type: Protein
SIO_000068: ncbiprotein

position:1535334:1
position: 1535334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1542076:1
position: 1542076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1535334-1535345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1540803-1540919:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1541951-1542076:1:exon

GNG12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: GNG12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 isoform X2
translation: MSGKTASTTNNIAQARRTVQQLRIEASIERIKVSKASADLMLYCEEHAKKDPLLMGIPASENPFKDKKTCVLL
SIO_010081: GNG12
subclass of: SO_0000673
so part of: GNG12
location: join(1540824..1540919,1541951..1542076)
location: region:1540824-1542076:1
so has part: feature:1540824-1540919:1:exon
so has part: feature:1541951-1542076:1:exon

XP_032048514.1
type: Protein
SIO_000068: ncbiprotein

position:1540824:1
position: 1540824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1540824-1540919:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1541951-1542076:1:exon

GNG12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: GNG12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 isoform X2
translation: MSGKTASTTNNIAQARRTVQQLRIEASIERIKVSKASADLMLYCEEHAKKDPLLMGIPASENPFKDKKTCVLL
SIO_010081: GNG12
subclass of: SO_0000673
so part of: GNG12
location: join(1540824..1540919,1541951..1542076)
location: region:1540824-1542076:1
so has part: feature:1540824-1540919:1:exon
so has part: feature:1541951-1542076:1:exon

XP_032048516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1540824-1540919:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1541951-1542076:1:exon

GNG12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: GNG12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 isoform X2
translation: MSGKTASTTNNIAQARRTVQQLRIEASIERIKVSKASADLMLYCEEHAKKDPLLMGIPASENPFKDKKTCVLL
SIO_010081: GNG12
subclass of: SO_0000673
so part of: GNG12
location: join(1540824..1540919,1541951..1542076)
location: region:1540824-1542076:1
so has part: feature:1540824-1540919:1:exon
so has part: feature:1541951-1542076:1:exon

XP_032048517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1540824-1540919:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1541951-1542076:1:exon

GADD45A
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: GADD45A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1546169..1547288)
location: region:1546169-1547288:-1
so has part: feature:1546169-1547288:-1:exon
subclass of: SO_0000010

116492040
type: Gene
SIO_000068: ncbigene

position:1546169:-1
position: 1546169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1547288:-1
position: 1547288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1546169-1547288:-1:exon

GADD45A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: GADD45A
product: growth arrest and DNA damage inducible alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032192457.1
SIO_010081: GADD45A
subclass of: SO_0000673
so part of: GADD45A
location: complement(join(1546169..1546378,1546484..1546697,1546913..1547014,1547120..1547288))
location: region:1546169-1547288:-1
so has part: feature:1547120-1547288:-1:exon
so has part: feature:1546913-1547014:-1:exon
so has part: feature:1546484-1546697:-1:exon
so has part: feature:1546169-1546378:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1547120-1547288:-1:exon

position:1547120:-1
position: 1547120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1546913-1547014:-1:exon

position:1546913:-1
position: 1546913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1547014:-1
position: 1547014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1546484-1546697:-1:exon

position:1546484:-1
position: 1546484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1546697:-1
position: 1546697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1546169-1546378:-1:exon

position:1546378:-1
position: 1546378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GADD45A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: GADD45A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth arrest and DNA damage-inducible protein GADD45 alpha
translation: MTLEGLPGEHRTAGRMEQAGDALEEVLSKALSQRSLTLGVYEAAKLLNVDPDNVVLCLLAADEEEAEDAALQIHFTLIQAFCCENDINILRVSNPARLAQLLLPHTATEPPTDLHCVLVTNPHASQWKDPALSQLMCFCRERRYADQWVPVINLPER
SIO_010081: GADD45A
subclass of: SO_0000673
so part of: GADD45A
location: complement(join(1546265..1546378,1546484..1546697,1546913..1547014,1547120..1547163))
location: region:1546265-1547163:-1
so has part: feature:1547120-1547163:-1:exon
so has part: feature:1546913-1547014:-1:exon
so has part: feature:1546484-1546697:-1:exon
so has part: feature:1546265-1546378:-1:exon

XP_032048348.1
type: Protein
SIO_000068: ncbiprotein

position:1546265:-1
position: 1546265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1547163:-1
position: 1547163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1547120-1547163:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1546913-1547014:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1546484-1546697:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1546265-1546378:-1:exon

SERBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: SERBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1558455..1573940
location: region:1558455-1573940:1
so has part: feature:1558455-1573940:1:exon
subclass of: SO_0000010

116491817
type: Gene
SIO_000068: ncbigene

position:1558455:1
position: 1558455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1573940:1
position: 1573940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1558455-1573940:1:exon

SERBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SERBP1
product: SERPINE1 mRNA binding protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032192136.1
SIO_010081: SERBP1
subclass of: SO_0000673
so part of: SERBP1
location: join(1558455..1558961,1561617..1561785,1562786..1562923,1563034..1563129,1563698..1563772,1565889..1566066,1569073..1569120,1571354..1571527,1572521..1572559,1573431..1573940)
location: region:1558455-1573940:1
so has part: feature:1558455-1558961:1:exon
so has part: feature:1561617-1561785:1:exon
so has part: feature:1562786-1562923:1:exon
so has part: feature:1563034-1563129:1:exon
so has part: feature:1563698-1563772:1:exon
so has part: feature:1565889-1566066:1:exon
so has part: feature:1569073-1569120:1:exon
so has part: feature:1571354-1571527:1:exon
so has part: feature:1572521-1572559:1:exon
so has part: feature:1573431-1573940:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1558455-1558961:1:exon

position:1558961:1
position: 1558961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1561617-1561785:1:exon

position:1561617:1
position: 1561617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1561785:1
position: 1561785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1562786-1562923:1:exon

position:1562786:1
position: 1562786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1562923:1
position: 1562923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1563034-1563129:1:exon

position:1563034:1
position: 1563034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1563129:1
position: 1563129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1563698-1563772:1:exon

position:1563698:1
position: 1563698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1563772:1
position: 1563772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1565889-1566066:1:exon

position:1565889:1
position: 1565889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1566066:1
position: 1566066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1569073-1569120:1:exon

position:1569073:1
position: 1569073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1569120:1
position: 1569120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1571354-1571527:1:exon

position:1571354:1
position: 1571354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1571527:1
position: 1571527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1572521-1572559:1:exon

position:1572521:1
position: 1572521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1572559:1
position: 1572559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1573431-1573940:1:exon

position:1573431:1
position: 1573431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SERBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SERBP1
product: SERPINE1 mRNA binding protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032192138.1
SIO_010081: SERBP1
subclass of: SO_0000673
so part of: SERBP1
location: join(1558458..1558961,1561617..1561785,1562786..1562923,1563058..1563129,1563698..1563772,1565889..1566066,1571354..1571527,1572521..1572559,1573431..1573940)
location: region:1558458-1573940:1
so has part: feature:1558458-1558961:1:exon
so has part: feature:1561617-1561785:1:exon
so has part: feature:1562786-1562923:1:exon
so has part: feature:1563058-1563129:1:exon
so has part: feature:1563698-1563772:1:exon
so has part: feature:1565889-1566066:1:exon
so has part: feature:1571354-1571527:1:exon
so has part: feature:1572521-1572559:1:exon
so has part: feature:1573431-1573940:1:exon

position:1558458:1
position: 1558458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1558458-1558961:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1561617-1561785:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1562786-1562923:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1563058-1563129:1:exon

position:1563058:1
position: 1563058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1563698-1563772:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1565889-1566066:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1571354-1571527:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1572521-1572559:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1573431-1573940:1:exon

SERBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SERBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plasminogen activator inhibitor 1 RNA-binding protein isoform X1
translation: MPGHLQEGFGCVVTNRFDQLFDDESDPFEVLRAAETRRKESGGGGGHQGGGGARGGPAGAQSGSAGGGAGGGGGGPGQAGAGGGAGSAAKQLRRESQKERKNPLPPFAASAGGAADRREEGSGQPGAPLRKEGIRRIGRRPDQQQQQQQQQQGEGKPIERRPERRPPRERRFDKPADEKGEGGEFSVDKPILDRPMRGRGGLGRGRGRGRGMGRGDGFDSRGKREFDRHSGSDRSSVSHSHFSGLKHEDKRGGSGSHNWGTVKDELTELDQSAVTEETPEGEEHPPADSENKENEVEEVKEEGPKEMTLDEWKAIQSKDRAKVEFNIRKPNEGADGQWKKGFVLHKSKSEETKAMTEMQGSQLESNEAHAEDSVMDHHFRKPANDITSQLEINFGDLGRPGRGGRGGRGGRGRGGRASRGGRTDKLVKEFDVIHTPNQSSASAPDVDDPEAFPALS
SIO_010081: SERBP1
subclass of: SO_0000673
so part of: SERBP1
location: join(1558565..1558961,1561617..1561785,1562786..1562923,1563034..1563129,1563698..1563772,1565889..1566066,1569073..1569120,1571354..1571527,1572521..1572559,1573431..1573487)
location: region:1558565-1573487:1
so has part: feature:1558565-1558961:1:exon
so has part: feature:1561617-1561785:1:exon
so has part: feature:1562786-1562923:1:exon
so has part: feature:1563034-1563129:1:exon
so has part: feature:1563698-1563772:1:exon
so has part: feature:1565889-1566066:1:exon
so has part: feature:1569073-1569120:1:exon
so has part: feature:1571354-1571527:1:exon
so has part: feature:1572521-1572559:1:exon
so has part: feature:1573431-1573487:1:exon

XP_032048027.1
type: Protein
SIO_000068: ncbiprotein

position:1558565:1
position: 1558565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1573487:1
position: 1573487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1558565-1558961:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1561617-1561785:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1562786-1562923:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1563034-1563129:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1563698-1563772:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1565889-1566066:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1569073-1569120:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1571354-1571527:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1572521-1572559:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1573431-1573487:1:exon

SERBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SERBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plasminogen activator inhibitor 1 RNA-binding protein isoform X2
translation: MPGHLQEGFGCVVTNRFDQLFDDESDPFEVLRAAETRRKESGGGGGHQGGGGARGGPAGAQSGSAGGGAGGGGGGPGQAGAGGGAGSAAKQLRRESQKERKNPLPPFAASAGGAADRREEGSGQPGAPLRKEGIRRIGRRPDQQQQQQQQQQGEGKPIERRPERRPPRERRFDKPADEKGEGGEFSVDKPILDRPMRGRGGLGRGRGRGRGMGRGDGFDSRGKREFDRHSGSDRSGLKHEDKRGGSGSHNWGTVKDELTELDQSAVTEETPEGEEHPPADSENKENEVEEVKEEGPKEMTLDEWKAIQSKDRAKVEFNIRKPNEGADGQWKKGFVLHKSKSEEAHAEDSVMDHHFRKPANDITSQLEINFGDLGRPGRGGRGGRGGRGRGGRASRGGRTDKLVKEFDVIHTPNQSSASAPDVDDPEAFPALS
SIO_010081: SERBP1
subclass of: SO_0000673
so part of: SERBP1
location: join(1558565..1558961,1561617..1561785,1562786..1562923,1563058..1563129,1563698..1563772,1565889..1566066,1571354..1571527,1572521..1572559,1573431..1573487)
location: region:1558565-1573487:1
so has part: feature:1558565-1558961:1:exon
so has part: feature:1561617-1561785:1:exon
so has part: feature:1562786-1562923:1:exon
so has part: feature:1563058-1563129:1:exon
so has part: feature:1563698-1563772:1:exon
so has part: feature:1565889-1566066:1:exon
so has part: feature:1571354-1571527:1:exon
so has part: feature:1572521-1572559:1:exon
so has part: feature:1573431-1573487:1:exon

XP_032048029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1558565-1558961:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1561617-1561785:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1562786-1562923:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1563058-1563129:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1563698-1563772:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1565889-1566066:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1571354-1571527:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1572521-1572559:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1573431-1573487:1:exon

IL12RB2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: IL12RB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1578969..1599946)
location: region:1578969-1599946:-1
so has part: feature:1578969-1599946:-1:exon
subclass of: SO_0000010

116491856
type: Gene
SIO_000068: ncbigene

position:1578969:-1
position: 1578969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1599946:-1
position: 1599946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1578969-1599946:-1:exon

IL12RB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: IL12RB2
product: interleukin 12 receptor subunit beta 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 49% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032192215.1
SIO_010081: IL12RB2
subclass of: SO_0000673
so part of: IL12RB2
location: complement(join(1578969..1579484,1579780..1579879,1580737..1580824,1582268..1582405,1582686..1582841,1582924..1583025,1584093..1584293,1585207..1585417,1589330..1589409,1592171..1592315,1592809..1592945,1593135..1593313,1594377..1594491,1595386..1595658,1596627..1596687,1596719..1596748,1599938..1599946))
location: region:1578969-1599946:-1
so has part: feature:1599938-1599946:-1:exon
so has part: feature:1596719-1596748:-1:exon
so has part: feature:1596627-1596687:-1:exon
so has part: feature:1595386-1595658:-1:exon
so has part: feature:1594377-1594491:-1:exon
so has part: feature:1593135-1593313:-1:exon
so has part: feature:1592809-1592945:-1:exon
so has part: feature:1592171-1592315:-1:exon
so has part: feature:1589330-1589409:-1:exon
so has part: feature:1585207-1585417:-1:exon
so has part: feature:1584093-1584293:-1:exon
so has part: feature:1582924-1583025:-1:exon
so has part: feature:1582686-1582841:-1:exon
so has part: feature:1582268-1582405:-1:exon
so has part: feature:1580737-1580824:-1:exon
so has part: feature:1579780-1579879:-1:exon
so has part: feature:1578969-1579484:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1599938-1599946:-1:exon

position:1599938:-1
position: 1599938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1596719-1596748:-1:exon

position:1596719:-1
position: 1596719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1596748:-1
position: 1596748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1596627-1596687:-1:exon

position:1596627:-1
position: 1596627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1596687:-1
position: 1596687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1595386-1595658:-1:exon

position:1595386:-1
position: 1595386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1595658:-1
position: 1595658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1594377-1594491:-1:exon

position:1594377:-1
position: 1594377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1594491:-1
position: 1594491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1593135-1593313:-1:exon

position:1593135:-1
position: 1593135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1593313:-1
position: 1593313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1592809-1592945:-1:exon

position:1592809:-1
position: 1592809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1592945:-1
position: 1592945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1592171-1592315:-1:exon

position:1592171:-1
position: 1592171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1592315:-1
position: 1592315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1589330-1589409:-1:exon

position:1589330:-1
position: 1589330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1589409:-1
position: 1589409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1585207-1585417:-1:exon

position:1585207:-1
position: 1585207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1585417:-1
position: 1585417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1584093-1584293:-1:exon

position:1584093:-1
position: 1584093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1584293:-1
position: 1584293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1582924-1583025:-1:exon

position:1582924:-1
position: 1582924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1583025:-1
position: 1583025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1582686-1582841:-1:exon

position:1582686:-1
position: 1582686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1582841:-1
position: 1582841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1582268-1582405:-1:exon

position:1582268:-1
position: 1582268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1582405:-1
position: 1582405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1580737-1580824:-1:exon

position:1580737:-1
position: 1580737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1580824:-1
position: 1580824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1579780-1579879:-1:exon

position:1579780:-1
position: 1579780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1579879:-1
position: 1579879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1578969-1579484:-1:exon

position:1579484:-1
position: 1579484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IL12RB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: IL12RB2
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(1596664..1596666),aa:OTHER)
transl except: (pos:complement(1596640..1596642),aa:OTHER)
product: LOW QUALITY PROTEIN: interleukin-12 receptor subunit beta-2
translation: MDRERIKKLESCCYDVFFLLXALPNFGCXAAARKICDKGNMTANSASHVQPGTNITLSCQLKQLKYNEQCKIAIFFNSSELIINYGTSVSTKFQVLTYGKHMFTCKIVCEYKKKLICGVDIMSGNPPDQPRNVSCIQYGTDGSPTCTWDKGRLTHINTTYVIQLSDGTDIFCFLEENLSNKFGSLVLSKKLNFDSTYTVVVAASNELGSAFSQPLMFMLIDIVKPHPPRLLVEFENSVTNFTFVWHDEVRAQHCRIRYRPLTGYAWNTVENVNSENFSLYGLEPHTEYEFQVSCKIHPERGLWSNWSVFQTQTPEAVPTGLLDVWYKMQDVDSQTQNISLFWKALSKSEAKGRILQYTVTLEALNRGGSEAEVTTQTSYTRTTAKMDYRITVTADNSRGSSPPAVIVTDLGIGDLPPPQKVSALPMGNGSIFVSWKPPNKSTAFINGYIVEWMDTHRKKSLAPPPTWIKLVASNLSTVISEHIKDNVCYDISVFALYQDRAGRVASVRGYSREKAPSAGPQMYTTPQTNGVLVSWEDIPSHQQMGCITAYNIYLRKKDSEVAPAVYAISNATSQREFYITNLQRGENYILWMTASTAAGESPWGNRELVCLESAVDWLIVVLTCSFFVFSVCVCSMRPARKVLYSLLSATVPQWHNKAIPDPANATWAKSYAAVKGELSVPSSLFLQDTSSFEEPETIEVEEGFTKTDSQIFHDKLILGKVHGRENHDWQSESSFGKQESEYEALPSTTDGDSYEHQLPYLYRRMAEVTEQMQPASEYLANPISDRAPGYLPAGILAPATDTAAEQQELECSPISVFPTTFLTPVFSYGGKLNLDTVRLNCSSFTR
SIO_010081: IL12RB2
subclass of: SO_0000673
so part of: IL12RB2
location: complement(join(1578969..1579484,1579780..1579879,1580737..1580824,1582268..1582405,1582686..1582841,1582924..1583025,1584093..1584293,1585207..1585417,1589330..1589409,1592171..1592315,1592809..1592945,1593135..1593313,1594377..1594491,1595386..1595658,1596627..1596687,1596719..1596748,1599938..1599946))
location: region:1578969-1599946:-1
so has part: feature:1599938-1599946:-1:exon
so has part: feature:1596719-1596748:-1:exon
so has part: feature:1596627-1596687:-1:exon
so has part: feature:1595386-1595658:-1:exon
so has part: feature:1594377-1594491:-1:exon
so has part: feature:1593135-1593313:-1:exon
so has part: feature:1592809-1592945:-1:exon
so has part: feature:1592171-1592315:-1:exon
so has part: feature:1589330-1589409:-1:exon
so has part: feature:1585207-1585417:-1:exon
so has part: feature:1584093-1584293:-1:exon
so has part: feature:1582924-1583025:-1:exon
so has part: feature:1582686-1582841:-1:exon
so has part: feature:1582268-1582405:-1:exon
so has part: feature:1580737-1580824:-1:exon
so has part: feature:1579780-1579879:-1:exon
so has part: feature:1578969-1579484:-1:exon

XP_032048106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1599938-1599946:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1596719-1596748:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1596627-1596687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1595386-1595658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1594377-1594491:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1593135-1593313:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1592809-1592945:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1592171-1592315:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1589330-1589409:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1585207-1585417:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1584093-1584293:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1582924-1583025:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1582686-1582841:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1582268-1582405:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1580737-1580824:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1579780-1579879:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1578969-1579484:-1:exon

IL23R
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: IL23R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1608089..1620263)
location: region:1608089-1620263:-1
so has part: feature:1608089-1620263:-1:exon
subclass of: SO_0000010

116491857
type: Gene
SIO_000068: ncbigene

position:1608089:-1
position: 1608089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1620263:-1
position: 1620263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1608089-1620263:-1:exon

IL23R
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: IL23R
product: interleukin 23 receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 58% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032192216.1
SIO_010081: IL23R
subclass of: SO_0000673
so part of: IL23R
location: complement(join(1608089..1609208,1609668..1609758,1611169..1611265,1612420..1612470,1615351..1615434,1615706..1615903,1617093..1617297,1617461..1617543,1617882..1618029,1618640..1618785,1618909..1619063,1619724..1619847,1620029..1620263))
location: region:1608089-1620263:-1
so has part: feature:1620029-1620263:-1:exon
so has part: feature:1619724-1619847:-1:exon
so has part: feature:1618909-1619063:-1:exon
so has part: feature:1618640-1618785:-1:exon
so has part: feature:1617882-1618029:-1:exon
so has part: feature:1617461-1617543:-1:exon
so has part: feature:1617093-1617297:-1:exon
so has part: feature:1615706-1615903:-1:exon
so has part: feature:1615351-1615434:-1:exon
so has part: feature:1612420-1612470:-1:exon
so has part: feature:1611169-1611265:-1:exon
so has part: feature:1609668-1609758:-1:exon
so has part: feature:1608089-1609208:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1620029-1620263:-1:exon

position:1620029:-1
position: 1620029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1619724-1619847:-1:exon

position:1619724:-1
position: 1619724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1619847:-1
position: 1619847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1618909-1619063:-1:exon

position:1618909:-1
position: 1618909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1619063:-1
position: 1619063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1618640-1618785:-1:exon

position:1618640:-1
position: 1618640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1618785:-1
position: 1618785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1617882-1618029:-1:exon

position:1617882:-1
position: 1617882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1618029:-1
position: 1618029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1617461-1617543:-1:exon

position:1617461:-1
position: 1617461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1617543:-1
position: 1617543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1617093-1617297:-1:exon

position:1617093:-1
position: 1617093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1617297:-1
position: 1617297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1615706-1615903:-1:exon

position:1615706:-1
position: 1615706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1615903:-1
position: 1615903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1615351-1615434:-1:exon

position:1615351:-1
position: 1615351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1615434:-1
position: 1615434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1612420-1612470:-1:exon

position:1612420:-1
position: 1612420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1612470:-1
position: 1612470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1611169-1611265:-1:exon

position:1611169:-1
position: 1611169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1611265:-1
position: 1611265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1609668-1609758:-1:exon

position:1609668:-1
position: 1609668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1609758:-1
position: 1609758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1608089-1609208:-1:exon

position:1609208:-1
position: 1609208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IL23R
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: IL23R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-23 receptor
translation: MGSNISINCLSTTGCPRANLSIQLNSTARNGTLRPLNSSAAQLRLHDFRLPYSTVLCFDHCRSRENVVLVCGTEVWAGYPPETPGNLTCTIGEDSGSLACTWDAGRPTHLRTEYRLHLSSTQTAEEDVFPAGSPVPLSALRGGSRYLAWVQARNALGAARSAARHLDLQELVVPALPLAEGAETTLGSPPITTVRWRQQTQLEDVHCEERHKAEDAPMWHVEAWDSAVRAGHPLQSDTRYVFQARCRRSPQNSPWSAWSPPFMYTTPEAAPAAAPDVWRRLGSVFPNGSHEVTVLIKPLPPRAARGRILGYAVSVGSGQPLCNTSSTSCSVLVPPGVRVLHVTAHNSRGASSPANITLGREARQQAFPAPAAVEVQRQNQSNVSVSWQPPSGSRSPLLWFIVEWVSTAPYSKEERFFWKKVPYQDTLTYIQEDTAVASNINVSVYAVYPDGVSKPTSGQVSSDDQIPSFSYNETSHDDDTGVFLGMGVSVMVSSVVLAILMFKKSARKRIKATVASLLPKWLREDFPHMENSNVIKSLQEKNEFTSNSSCELFLDPTIMEIEEMSVHEKYKNVDIKKKPSTAVPENVEHPQSSAPAVSTAPEHVSDYKPQISDGSPLGYVAANIYQAQSHTPAPEPETTETTFFFRDYTSPVSYLWNAEGAEHNVCLLEKINLILNNNRSGQNYAFSSAQEEQNTLLENQWEKTLSSENVQEQTLVPDELVSCLRAMNEEPVDIQSCLQQRIGRLF
SIO_010081: IL23R
subclass of: SO_0000673
so part of: IL23R
location: complement(join(1608585..1609208,1609668..1609758,1611169..1611265,1612420..1612470,1615351..1615434,1615706..1615903,1617093..1617297,1617461..1617543,1617882..1618029,1618640..1618785,1618909..1619063,1619724..1619847,1620029..1620263))
location: region:1608585-1620263:-1
so has part: feature:1620029-1620263:-1:exon
so has part: feature:1619724-1619847:-1:exon
so has part: feature:1618909-1619063:-1:exon
so has part: feature:1618640-1618785:-1:exon
so has part: feature:1617882-1618029:-1:exon
so has part: feature:1617461-1617543:-1:exon
so has part: feature:1617093-1617297:-1:exon
so has part: feature:1615706-1615903:-1:exon
so has part: feature:1615351-1615434:-1:exon
so has part: feature:1612420-1612470:-1:exon
so has part: feature:1611169-1611265:-1:exon
so has part: feature:1609668-1609758:-1:exon
so has part: feature:1608585-1609208:-1:exon

XP_032048107.1
type: Protein
SIO_000068: ncbiprotein

position:1608585:-1
position: 1608585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1620029-1620263:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1619724-1619847:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1618909-1619063:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1618640-1618785:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1617882-1618029:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1617461-1617543:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1617093-1617297:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1615706-1615903:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1615351-1615434:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1612420-1612470:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1611169-1611265:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1609668-1609758:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1608585-1609208:-1:exon

SLC35D1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: SLC35D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1626873..1635162
location: region:1626873-1635162:1
so has part: feature:1626873-1635162:1:exon
subclass of: SO_0000010

116491899
type: Gene
SIO_000068: ncbigene

position:1626873:1
position: 1626873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1635162:1
position: 1635162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1626873-1635162:1:exon

SLC35D1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SLC35D1
product: solute carrier family 35 member D1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032192261.1
SIO_010081: SLC35D1
subclass of: SO_0000673
so part of: SLC35D1
location: join(1626873..1627102,1627240..1627273,1628244..1628330,1628513..1628580,1628750..1628821,1629261..1629329,1629771..1629873,1630004..1630096,1631724..1631791,1632099..1632177,1632853..1632935,1633688..1635162)
location: region:1626873-1635162:1
so has part: feature:1626873-1627102:1:exon
so has part: feature:1627240-1627273:1:exon
so has part: feature:1628244-1628330:1:exon
so has part: feature:1628513-1628580:1:exon
so has part: feature:1628750-1628821:1:exon
so has part: feature:1629261-1629329:1:exon
so has part: feature:1629771-1629873:1:exon
so has part: feature:1630004-1630096:1:exon
so has part: feature:1631724-1631791:1:exon
so has part: feature:1632099-1632177:1:exon
so has part: feature:1632853-1632935:1:exon
so has part: feature:1633688-1635162:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1626873-1627102:1:exon

position:1627102:1
position: 1627102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1627240-1627273:1:exon

position:1627240:1
position: 1627240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1627273:1
position: 1627273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1628244-1628330:1:exon

position:1628244:1
position: 1628244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1628330:1
position: 1628330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1628513-1628580:1:exon

position:1628513:1
position: 1628513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1628580:1
position: 1628580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1628750-1628821:1:exon

position:1628750:1
position: 1628750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1628821:1
position: 1628821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1629261-1629329:1:exon

position:1629261:1
position: 1629261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1629329:1
position: 1629329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1629771-1629873:1:exon

position:1629771:1
position: 1629771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1629873:1
position: 1629873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1630004-1630096:1:exon

position:1630004:1
position: 1630004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1630096:1
position: 1630096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1631724-1631791:1:exon

position:1631724:1
position: 1631724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1631791:1
position: 1631791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1632099-1632177:1:exon

position:1632099:1
position: 1632099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1632177:1
position: 1632177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1632853-1632935:1:exon

position:1632853:1
position: 1632853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1632935:1
position: 1632935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1633688-1635162:1:exon

position:1633688:1
position: 1633688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC35D1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SLC35D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter
translation: MSLRPARSRRALGAGGGAPGGAPARGDAERGRGRAGAVAMALPPGPPLCLRLLAAAFYGLSSFLIVVVNKSVLTAYGFPSSLCVGLGQMVATVAVLWAGKALRVLSFPDLDRHIPRRTFPLPLLYFGNQITGLFSTKKLNLPMFTVLRRFSILFTMFAEGFLLKKKFSWGIQMTVFAMIIGAFVAASADLAFDLEGYIFILVNDALTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLTIAYFTGDAQKAMEYKGWTDVFFVVQFMLSCVMGFILMYSTVLCTQYNSALTTTIVGCIKNILITYIGMFFGGDYIFTWTNFIGLNISIAGSLVYSYITFTEEQLSKQSEAGIKMDIKGKSSV
SIO_010081: SLC35D1
subclass of: SO_0000673
so part of: SLC35D1
location: join(1626873..1627102,1627240..1627273,1628244..1628330,1628513..1628580,1628750..1628821,1629261..1629329,1629771..1629873,1630004..1630096,1631724..1631791,1632099..1632177,1632853..1632935,1633688..1633796)
location: region:1626873-1633796:1
so has part: feature:1626873-1627102:1:exon
so has part: feature:1627240-1627273:1:exon
so has part: feature:1628244-1628330:1:exon
so has part: feature:1628513-1628580:1:exon
so has part: feature:1628750-1628821:1:exon
so has part: feature:1629261-1629329:1:exon
so has part: feature:1629771-1629873:1:exon
so has part: feature:1630004-1630096:1:exon
so has part: feature:1631724-1631791:1:exon
so has part: feature:1632099-1632177:1:exon
so has part: feature:1632853-1632935:1:exon
so has part: feature:1633688-1633796:1:exon

XP_032048152.1
type: Protein
SIO_000068: ncbiprotein

position:1633796:1
position: 1633796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1626873-1627102:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1627240-1627273:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1628244-1628330:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1628513-1628580:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1628750-1628821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1629261-1629329:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1629771-1629873:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1630004-1630096:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1631724-1631791:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1632099-1632177:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1632853-1632935:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1633688-1633796:1:exon

MIER1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: MIER1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1636168..1667642)
location: region:1636168-1667642:-1
so has part: feature:1636168-1667642:-1:exon
subclass of: SO_0000010

116491898
type: Gene
SIO_000068: ncbigene

position:1636168:-1
position: 1636168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1667642:-1
position: 1667642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1636168-1667642:-1:exon

MIER1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: MIER1
product: MIER1 transcriptional regulator, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032192260.1
SIO_010081: MIER1
subclass of: SO_0000673
so part of: MIER1
location: complement(join(1636168..1638909,1639620..1639759,1641439..1641566,1642068..1642162,1643290..1643371,1643956..1644107,1646862..1646934,1647262..1647326,1649404..1649536,1652045..1652212,1657306..1657451,1658937..1658961,1667596..1667642))
location: region:1636168-1667642:-1
so has part: feature:1667596-1667642:-1:exon
so has part: feature:1658937-1658961:-1:exon
so has part: feature:1657306-1657451:-1:exon
so has part: feature:1652045-1652212:-1:exon
so has part: feature:1649404-1649536:-1:exon
so has part: feature:1647262-1647326:-1:exon
so has part: feature:1646862-1646934:-1:exon
so has part: feature:1643956-1644107:-1:exon
so has part: feature:1643290-1643371:-1:exon
so has part: feature:1642068-1642162:-1:exon
so has part: feature:1641439-1641566:-1:exon
so has part: feature:1639620-1639759:-1:exon
so has part: feature:1636168-1638909:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1667596-1667642:-1:exon

position:1667596:-1
position: 1667596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1658937-1658961:-1:exon

position:1658937:-1
position: 1658937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1658961:-1
position: 1658961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1657306-1657451:-1:exon

position:1657306:-1
position: 1657306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1657451:-1
position: 1657451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1652045-1652212:-1:exon

position:1652045:-1
position: 1652045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1652212:-1
position: 1652212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1649404-1649536:-1:exon

position:1649404:-1
position: 1649404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1649536:-1
position: 1649536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1647262-1647326:-1:exon

position:1647262:-1
position: 1647262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1647326:-1
position: 1647326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1646862-1646934:-1:exon

position:1646862:-1
position: 1646862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1646934:-1
position: 1646934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1643956-1644107:-1:exon

position:1643956:-1
position: 1643956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1644107:-1
position: 1644107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1643290-1643371:-1:exon

position:1643290:-1
position: 1643290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1643371:-1
position: 1643371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1642068-1642162:-1:exon

position:1642068:-1
position: 1642068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1642162:-1
position: 1642162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1641439-1641566:-1:exon

position:1641439:-1
position: 1641439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1641566:-1
position: 1641566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1639620-1639759:-1:exon

position:1639620:-1
position: 1639620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1639759:-1
position: 1639759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1636168-1638909:-1:exon

position:1638909:-1
position: 1638909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MIER1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: MIER1
product: MIER1 transcriptional regulator, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032192259.1
SIO_010081: MIER1
subclass of: SO_0000673
so part of: MIER1
location: complement(join(1636168..1638909,1639620..1639759,1641439..1641566,1642068..1642162,1643290..1643371,1643956..1644107,1646862..1646934,1647262..1647326,1649404..1649536,1652045..1652212,1657306..1657451,1658937..1658961,1667261..1667300))
location: region:1636168-1667300:-1
so has part: feature:1667261-1667300:-1:exon
so has part: feature:1658937-1658961:-1:exon
so has part: feature:1657306-1657451:-1:exon
so has part: feature:1652045-1652212:-1:exon
so has part: feature:1649404-1649536:-1:exon
so has part: feature:1647262-1647326:-1:exon
so has part: feature:1646862-1646934:-1:exon
so has part: feature:1643956-1644107:-1:exon
so has part: feature:1643290-1643371:-1:exon
so has part: feature:1642068-1642162:-1:exon
so has part: feature:1641439-1641566:-1:exon
so has part: feature:1639620-1639759:-1:exon
so has part: feature:1636168-1638909:-1:exon

position:1667300:-1
position: 1667300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1667261-1667300:-1:exon

position:1667261:-1
position: 1667261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1658937-1658961:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1657306-1657451:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1652045-1652212:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1649404-1649536:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1647262-1647326:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1646862-1646934:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1643956-1644107:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1643290-1643371:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1642068-1642162:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1641439-1641566:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1639620-1639759:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1636168-1638909:-1:exon

MIER1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: MIER1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mesoderm induction early response protein 1 isoform X1
translation: MAEPSVESSSPGGSATSDDHEFDPSADMLVHDFDDERTLEEEEMMEGETNISSEIEDLNRESDMPIQELLSLYGYEGTIPLQEDDDDEDDEEEEEEGEDDDDVDNDDNSGCSGENKEETIKDSSGQEDETQSSNDDPAPSVASQDPQEIIRPRRCKYFDTNSEIEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPAGICKYKENEKVYENDDQLLWNPDFLPEDKVIEFLNEASRRTGDEKGLDAIPEGSHIKDNEQALYELVKCNFDTEESLRRLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDFHVIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTTSNSSTSQSEREDGATSSSNQNGVSANGPGEVPNKDEAKMEGLHVNGPTSGKKTPHTDLDTNGYETENLSIDPKLAHSTSRNENDFEEKSERPLKRRRINSNGKESPGSSEFFQEANSHGKLEELESLDD
SIO_010081: MIER1
subclass of: SO_0000673
so part of: MIER1
location: complement(join(1638584..1638909,1639620..1639759,1641439..1641566,1642068..1642162,1643290..1643371,1643956..1644107,1646862..1646934,1647262..1647326,1649404..1649536,1652045..1652212,1657306..1657451,1658937..1658961,1667261..1667269))
location: region:1638584-1667269:-1
so has part: feature:1667261-1667269:-1:exon
so has part: feature:1658937-1658961:-1:exon
so has part: feature:1657306-1657451:-1:exon
so has part: feature:1652045-1652212:-1:exon
so has part: feature:1649404-1649536:-1:exon
so has part: feature:1647262-1647326:-1:exon
so has part: feature:1646862-1646934:-1:exon
so has part: feature:1643956-1644107:-1:exon
so has part: feature:1643290-1643371:-1:exon
so has part: feature:1642068-1642162:-1:exon
so has part: feature:1641439-1641566:-1:exon
so has part: feature:1639620-1639759:-1:exon
so has part: feature:1638584-1638909:-1:exon

XP_032048150.1
type: Protein
SIO_000068: ncbiprotein

position:1638584:-1
position: 1638584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1667269:-1
position: 1667269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1667261-1667269:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1658937-1658961:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1657306-1657451:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1652045-1652212:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1649404-1649536:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1647262-1647326:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1646862-1646934:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1643956-1644107:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1643290-1643371:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1642068-1642162:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1641439-1641566:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1639620-1639759:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1638584-1638909:-1:exon

MIER1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: MIER1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mesoderm induction early response protein 1 isoform X2
translation: MLVHDFDDERTLEEEEMMEGETNISSEIEDLNRESDMPIQELLSLYGYEGTIPLQEDDDDEDDEEEEEEGEDDDDVDNDDNSGCSGENKEETIKDSSGQEDETQSSNDDPAPSVASQDPQEIIRPRRCKYFDTNSEIEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPAGICKYKENEKVYENDDQLLWNPDFLPEDKVIEFLNEASRRTGDEKGLDAIPEGSHIKDNEQALYELVKCNFDTEESLRRLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDFHVIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTTSNSSTSQSEREDGATSSSNQNGVSANGPGEVPNKDEAKMEGLHVNGPTSGKKTPHTDLDTNGYETENLSIDPKLAHSTSRNENDFEEKSERPLKRRRINSNGKESPGSSEFFQEANSHGKLEELESLDD
SIO_010081: MIER1
subclass of: SO_0000673
so part of: MIER1
location: complement(join(1638584..1638909,1639620..1639759,1641439..1641566,1642068..1642162,1643290..1643371,1643956..1644107,1646862..1646934,1647262..1647326,1649404..1649536,1652045..1652212,1657306..1657404))
location: region:1638584-1657404:-1
so has part: feature:1657306-1657404:-1:exon
so has part: feature:1652045-1652212:-1:exon
so has part: feature:1649404-1649536:-1:exon
so has part: feature:1647262-1647326:-1:exon
so has part: feature:1646862-1646934:-1:exon
so has part: feature:1643956-1644107:-1:exon
so has part: feature:1643290-1643371:-1:exon
so has part: feature:1642068-1642162:-1:exon
so has part: feature:1641439-1641566:-1:exon
so has part: feature:1639620-1639759:-1:exon
so has part: feature:1638584-1638909:-1:exon

XP_032048151.1
type: Protein
SIO_000068: ncbiprotein

position:1657404:-1
position: 1657404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1657306-1657404:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1652045-1652212:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1649404-1649536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1647262-1647326:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1646862-1646934:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1643956-1644107:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1643290-1643371:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1642068-1642162:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1641439-1641566:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1639620-1639759:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1638584-1638909:-1:exon

WDR78
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: WDR78
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1668153..1686332
location: region:1668153-1686332:1
so has part: feature:1668153-1686332:1:exon
subclass of: SO_0000010

116491981
type: Gene
SIO_000068: ncbigene

position:1668153:1
position: 1668153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1686332:1
position: 1686332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1668153-1686332:1:exon

WDR78
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: WDR78
product: WD repeat domain 78
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032192381.1
SIO_010081: WDR78
subclass of: SO_0000673
so part of: WDR78
location: join(1668153..1668190,1668668..1668827,1669816..1669889,1671677..1671789,1672016..1672172,1673658..1673797,1674978..1675127,1675623..1675814,1677044..1677294,1678652..1678738,1680488..1680639,1681692..1681849,1682049..1682170,1682850..1682948,1683618..1683844,1684731..1684884,1686267..1686332)
location: region:1668153-1686332:1
so has part: feature:1668153-1668190:1:exon
so has part: feature:1668668-1668827:1:exon
so has part: feature:1669816-1669889:1:exon
so has part: feature:1671677-1671789:1:exon
so has part: feature:1672016-1672172:1:exon
so has part: feature:1673658-1673797:1:exon
so has part: feature:1674978-1675127:1:exon
so has part: feature:1675623-1675814:1:exon
so has part: feature:1677044-1677294:1:exon
so has part: feature:1678652-1678738:1:exon
so has part: feature:1680488-1680639:1:exon
so has part: feature:1681692-1681849:1:exon
so has part: feature:1682049-1682170:1:exon
so has part: feature:1682850-1682948:1:exon
so has part: feature:1683618-1683844:1:exon
so has part: feature:1684731-1684884:1:exon
so has part: feature:1686267-1686332:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1668153-1668190:1:exon

position:1668190:1
position: 1668190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1668668-1668827:1:exon

position:1668668:1
position: 1668668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1668827:1
position: 1668827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1669816-1669889:1:exon

position:1669816:1
position: 1669816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1669889:1
position: 1669889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1671677-1671789:1:exon

position:1671677:1
position: 1671677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1671789:1
position: 1671789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1672016-1672172:1:exon

position:1672016:1
position: 1672016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1672172:1
position: 1672172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1673658-1673797:1:exon

position:1673658:1
position: 1673658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1673797:1
position: 1673797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1674978-1675127:1:exon

position:1674978:1
position: 1674978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1675127:1
position: 1675127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1675623-1675814:1:exon

position:1675623:1
position: 1675623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1675814:1
position: 1675814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1677044-1677294:1:exon

position:1677044:1
position: 1677044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1677294:1
position: 1677294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1678652-1678738:1:exon

position:1678652:1
position: 1678652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1678738:1
position: 1678738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1680488-1680639:1:exon

position:1680488:1
position: 1680488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1680639:1
position: 1680639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1681692-1681849:1:exon

position:1681692:1
position: 1681692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1681849:1
position: 1681849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1682049-1682170:1:exon

position:1682049:1
position: 1682049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1682170:1
position: 1682170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1682850-1682948:1:exon

position:1682850:1
position: 1682850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1682948:1
position: 1682948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1683618-1683844:1:exon

position:1683618:1
position: 1683618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1683844:1
position: 1683844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1684731-1684884:1:exon

position:1684731:1
position: 1684731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1684884:1
position: 1684884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1686267-1686332:1:exon

position:1686267:1
position: 1686267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WDR78
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: WDR78
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 78
translation: MLGPAAARRLSGVRQGSGTSLGIQRRGSIASSMYTGRAARRGSQFSISYGKAADKRSPVEKYAVRVFDDEGKDVTPHPLFHSDPDAAVPRRTCGSSSISKPNASPMESILDETVEPDSQGDTDLSLSDVQVRPEEIKEQLTEEDLDRRVDIYLTETETIWMLDMPSVVASVESEDAGRILERNKIYVDICKNRPGNDRFAEKMMQTINGAAKNKEVQCDKIVMEDKGVVVTSWDLYDSFNVLEIESASKGEATNGKSSTSHTTTKHDQTALVTSARGNITSVTTLERAALARTHKKEKNHLEAILTSEKFQQDLFFMERVLMENIFQPKLAAYRQFPVLIDPSVTSDNAGTVVAVKEAKREEHDKGKKDKEEQKEALIDPSIPSDLNKPVEETVPPSLEQLWSYTCDLTKGLNVSSMAWNKANPDLLAVGYGAFDFKEQKKGLACCWSLKNPMWPERIFQCEHGVTALDFSMASPNLLAVGMYNGTITIYNVRSCTTTAILNSRDSSESHTGPVWQLKWLEQDSNTAEDDKRERLISVSADGRLTKWLVQKELDCTDLMKIKRAGSEKKNLPREKERKSLVPISRQAAGMCFDFHPKDTNFYLAGTEEGLIHKCSCSYDQQFLETYKGHKGPVYKVAWNPFSTDMFLSCSADWSIKLWHQNSQTPILTFSSTTTVVHDIMWSPKSVFIFAAVNESRVEIWDLSVSILDPVITHSGNPEAKFTSVLFAKNTDCLLVGDSHGEVSVFELQNLAASSRTKVDALYDVISPALTT
SIO_010081: WDR78
subclass of: SO_0000673
so part of: WDR78
location: join(1668156..1668190,1668668..1668827,1669816..1669889,1671677..1671789,1672016..1672172,1673658..1673797,1674978..1675127,1675623..1675814,1677044..1677294,1678652..1678738,1680488..1680639,1681692..1681849,1682049..1682170,1682850..1682948,1683618..1683844,1684731..1684884,1686267..1686311)
location: region:1668156-1686311:1
so has part: feature:1668156-1668190:1:exon
so has part: feature:1668668-1668827:1:exon
so has part: feature:1669816-1669889:1:exon
so has part: feature:1671677-1671789:1:exon
so has part: feature:1672016-1672172:1:exon
so has part: feature:1673658-1673797:1:exon
so has part: feature:1674978-1675127:1:exon
so has part: feature:1675623-1675814:1:exon
so has part: feature:1677044-1677294:1:exon
so has part: feature:1678652-1678738:1:exon
so has part: feature:1680488-1680639:1:exon
so has part: feature:1681692-1681849:1:exon
so has part: feature:1682049-1682170:1:exon
so has part: feature:1682850-1682948:1:exon
so has part: feature:1683618-1683844:1:exon
so has part: feature:1684731-1684884:1:exon
so has part: feature:1686267-1686311:1:exon

XP_032048272.1
type: Protein
SIO_000068: ncbiprotein

position:1668156:1
position: 1668156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1686311:1
position: 1686311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1668156-1668190:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1668668-1668827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1669816-1669889:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1671677-1671789:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1672016-1672172:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1673658-1673797:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1674978-1675127:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1675623-1675814:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1677044-1677294:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1678652-1678738:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1680488-1680639:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1681692-1681849:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1682049-1682170:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1682850-1682948:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1683618-1683844:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1684731-1684884:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1686267-1686311:1:exon

INSL5
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: INSL5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1689026..1690691
location: region:1689026-1690691:1
so has part: feature:1689026-1690691:1:exon
subclass of: SO_0000010

116491718
type: Gene
SIO_000068: ncbigene

position:1689026:1
position: 1689026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1690691:1
position: 1690691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1689026-1690691:1:exon

INSL5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: INSL5
product: insulin like 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_032191908.1
SIO_010081: INSL5
subclass of: SO_0000673
so part of: INSL5
location: join(1689026..1689204,1690332..1690335,1690458..1690691)
location: region:1689026-1690691:1
so has part: feature:1689026-1689204:1:exon
so has part: feature:1690332-1690335:1:exon
so has part: feature:1690458-1690691:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1689026-1689204:1:exon

position:1689204:1
position: 1689204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1690332-1690335:1:exon

position:1690332:1
position: 1690332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1690335:1
position: 1690335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1690458-1690691:1:exon

position:1690458:1
position: 1690458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

INSL5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: INSL5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin-like peptide INSL5
translation: MRSTLLALAALALLAVARQAHGEGSAVKLCGRDFVRAIVFTCGGSRWRRDLADYQYLFGESSENPPPSSENGYADPLTYTDRRLGTDSEEILNTKPETKRAVQHPRKMSMLRKREVAKLLTTSCCSVGCSERDISSLC
SIO_010081: INSL5
subclass of: SO_0000673
so part of: INSL5
location: join(1689026..1689204,1690332..1690335,1690458..1690691)
location: region:1689026-1690691:1
so has part: feature:1689026-1689204:1:exon
so has part: feature:1690332-1690335:1:exon
so has part: feature:1690458-1690691:1:exon

XP_032047799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1689026-1689204:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1690332-1690335:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1690458-1690691:1:exon

TCTEX1D1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: TCTEX1D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1690766..1693471)
location: region:1690766-1693471:-1
so has part: feature:1690766-1693471:-1:exon
subclass of: SO_0000010

116491858
type: Gene
SIO_000068: ncbigene

position:1690766:-1
position: 1690766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1693471:-1
position: 1693471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1690766-1693471:-1:exon

TCTEX1D1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: TCTEX1D1
product: Tctex1 domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032192217.1
SIO_010081: TCTEX1D1
subclass of: SO_0000673
so part of: TCTEX1D1
location: complement(join(1690766..1692012,1693056..1693180,1693336..1693471))
location: region:1690766-1693471:-1
so has part: feature:1693336-1693471:-1:exon
so has part: feature:1693056-1693180:-1:exon
so has part: feature:1690766-1692012:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1693336-1693471:-1:exon

position:1693336:-1
position: 1693336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1693056-1693180:-1:exon

position:1693056:-1
position: 1693056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1693180:-1
position: 1693180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1690766-1692012:-1:exon

position:1692012:-1
position: 1692012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TCTEX1D1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: TCTEX1D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tctex1 domain-containing protein 1
translation: MRRGPGGSGTEPRCPPGSPRRPSTASGPGEGERGGGERGGGCPLTGPAERFPVGAVEAILRDVLRGHLQELPYEPGTCREMAKTIAEVIKARVKALLVPRYKIVVVTHIGQLNEQSMQIGSRCLWDPATDTFSSYVFKNTSLFALANVYAVYFE
SIO_010081: TCTEX1D1
subclass of: SO_0000673
so part of: TCTEX1D1
location: complement(join(1691809..1692012,1693056..1693180,1693336..1693471))
location: region:1691809-1693471:-1
so has part: feature:1693336-1693471:-1:exon
so has part: feature:1693056-1693180:-1:exon
so has part: feature:1691809-1692012:-1:exon

XP_032048108.1
type: Protein
SIO_000068: ncbiprotein

position:1691809:-1
position: 1691809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1693336-1693471:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1693056-1693180:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1691809-1692012:-1:exon

SGIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: SGIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1698019..1732699)
location: region:1698019-1732699:-1
so has part: feature:1698019-1732699:-1:exon
subclass of: SO_0000010

116491802
type: Gene
SIO_000068: ncbigene

position:1698019:-1
position: 1698019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1732699:-1
position: 1732699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1698019-1732699:-1:exon

SGIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SGIP1
product: SH3GL interacting endocytic adaptor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032192103.1
SIO_010081: SGIP1
subclass of: SO_0000673
so part of: SGIP1
location: complement(join(1698019..1698663,1698856..1699020,1699533..1699597,1699850..1700052,1700320..1700452,1700846..1701001,1701147..1701258,1705064..1705123,1707872..1707998,1708682..1708803,1710879..1711331,1712386..1712460,1712766..1712855,1713548..1713633,1714251..1714302,1714665..1714689,1715172..1715183,1715990..1716001,1716890..1717065,1717797..1717851,1718339..1718395,1719174..1719251,1720697..1720721,1722059..1722122,1732084..1732128,1732516..1732699))
location: region:1698019-1732699:-1
so has part: feature:1732516-1732699:-1:exon
so has part: feature:1732084-1732128:-1:exon
so has part: feature:1722059-1722122:-1:exon
so has part: feature:1720697-1720721:-1:exon
so has part: feature:1719174-1719251:-1:exon
so has part: feature:1718339-1718395:-1:exon
so has part: feature:1717797-1717851:-1:exon
so has part: feature:1716890-1717065:-1:exon
so has part: feature:1715990-1716001:-1:exon
so has part: feature:1715172-1715183:-1:exon
so has part: feature:1714665-1714689:-1:exon
so has part: feature:1714251-1714302:-1:exon
so has part: feature:1713548-1713633:-1:exon
so has part: feature:1712766-1712855:-1:exon
so has part: feature:1712386-1712460:-1:exon
so has part: feature:1710879-1711331:-1:exon
so has part: feature:1708682-1708803:-1:exon
so has part: feature:1707872-1707998:-1:exon
so has part: feature:1705064-1705123:-1:exon
so has part: feature:1701147-1701258:-1:exon
so has part: feature:1700846-1701001:-1:exon
so has part: feature:1700320-1700452:-1:exon
so has part: feature:1699850-1700052:-1:exon
so has part: feature:1699533-1699597:-1:exon
so has part: feature:1698856-1699020:-1:exon
so has part: feature:1698019-1698663:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1732516-1732699:-1:exon

position:1732516:-1
position: 1732516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1732084-1732128:-1:exon

position:1732084:-1
position: 1732084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1732128:-1
position: 1732128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1722059-1722122:-1:exon

position:1722059:-1
position: 1722059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1722122:-1
position: 1722122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1720697-1720721:-1:exon

position:1720697:-1
position: 1720697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1720721:-1
position: 1720721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1719174-1719251:-1:exon

position:1719174:-1
position: 1719174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1719251:-1
position: 1719251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1718339-1718395:-1:exon

position:1718339:-1
position: 1718339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1718395:-1
position: 1718395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1717797-1717851:-1:exon

position:1717797:-1
position: 1717797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1717851:-1
position: 1717851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1716890-1717065:-1:exon

position:1716890:-1
position: 1716890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1717065:-1
position: 1717065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1715990-1716001:-1:exon

position:1715990:-1
position: 1715990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1716001:-1
position: 1716001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1715172-1715183:-1:exon

position:1715172:-1
position: 1715172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1715183:-1
position: 1715183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1714665-1714689:-1:exon

position:1714665:-1
position: 1714665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1714689:-1
position: 1714689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1714251-1714302:-1:exon

position:1714251:-1
position: 1714251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1714302:-1
position: 1714302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1713548-1713633:-1:exon

position:1713548:-1
position: 1713548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1713633:-1
position: 1713633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1712766-1712855:-1:exon

position:1712766:-1
position: 1712766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1712855:-1
position: 1712855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1712386-1712460:-1:exon

position:1712386:-1
position: 1712386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1712460:-1
position: 1712460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1710879-1711331:-1:exon

position:1710879:-1
position: 1710879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1711331:-1
position: 1711331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1708682-1708803:-1:exon

position:1708682:-1
position: 1708682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1708803:-1
position: 1708803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1707872-1707998:-1:exon

position:1707872:-1
position: 1707872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1707998:-1
position: 1707998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1705064-1705123:-1:exon

position:1705064:-1
position: 1705064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1705123:-1
position: 1705123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1701147-1701258:-1:exon

position:1701147:-1
position: 1701147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1701258:-1
position: 1701258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1700846-1701001:-1:exon

position:1700846:-1
position: 1700846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1701001:-1
position: 1701001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1700320-1700452:-1:exon

position:1700320:-1
position: 1700320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1700452:-1
position: 1700452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1699850-1700052:-1:exon

position:1699850:-1
position: 1699850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1700052:-1
position: 1700052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1699533-1699597:-1:exon

position:1699533:-1
position: 1699533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1699597:-1
position: 1699597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1698856-1699020:-1:exon

position:1698856:-1
position: 1698856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1699020:-1
position: 1699020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1698019-1698663:-1:exon

position:1698663:-1
position: 1698663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SGIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SGIP1
product: SH3GL interacting endocytic adaptor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032192104.1
SIO_010081: SGIP1
subclass of: SO_0000673
so part of: SGIP1
location: complement(join(1698019..1698663,1698856..1699020,1699533..1699597,1699850..1700052,1700320..1700452,1700846..1701001,1701147..1701258,1705064..1705123,1707872..1707998,1708682..1708803,1710879..1711331,1712386..1712460,1712766..1712855,1713548..1713633,1714251..1714302,1714665..1714689,1715172..1715183,1715990..1716001,1716890..1717065,1717797..1717851,1718339..1718395,1719174..1719251,1720697..1720721,1722059..1722122,1732084..1732128,1732457..1732508))
location: region:1698019-1732508:-1
so has part: feature:1732457-1732508:-1:exon
so has part: feature:1732084-1732128:-1:exon
so has part: feature:1722059-1722122:-1:exon
so has part: feature:1720697-1720721:-1:exon
so has part: feature:1719174-1719251:-1:exon
so has part: feature:1718339-1718395:-1:exon
so has part: feature:1717797-1717851:-1:exon
so has part: feature:1716890-1717065:-1:exon
so has part: feature:1715990-1716001:-1:exon
so has part: feature:1715172-1715183:-1:exon
so has part: feature:1714665-1714689:-1:exon
so has part: feature:1714251-1714302:-1:exon
so has part: feature:1713548-1713633:-1:exon
so has part: feature:1712766-1712855:-1:exon
so has part: feature:1712386-1712460:-1:exon
so has part: feature:1710879-1711331:-1:exon
so has part: feature:1708682-1708803:-1:exon
so has part: feature:1707872-1707998:-1:exon
so has part: feature:1705064-1705123:-1:exon
so has part: feature:1701147-1701258:-1:exon
so has part: feature:1700846-1701001:-1:exon
so has part: feature:1700320-1700452:-1:exon
so has part: feature:1699850-1700052:-1:exon
so has part: feature:1699533-1699597:-1:exon
so has part: feature:1698856-1699020:-1:exon
so has part: feature:1698019-1698663:-1:exon

position:1732508:-1
position: 1732508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1732457-1732508:-1:exon

position:1732457:-1
position: 1732457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1732084-1732128:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1722059-1722122:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1720697-1720721:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1719174-1719251:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1718339-1718395:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1717797-1717851:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1716890-1717065:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1715990-1716001:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1715172-1715183:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1714665-1714689:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1714251-1714302:-1:exon

urn:…
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urn:…
SIO_000300: 26
SIO_000628: feature:1698019-1698663:-1:exon

SGIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SGIP1
product: SH3GL interacting endocytic adaptor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032192105.1
SIO_010081: SGIP1
subclass of: SO_0000673
so part of: SGIP1
location: complement(join(1698019..1698663,1698856..1699020,1699533..1699597,1699850..1700052,1700320..1700452,1700846..1701001,1701147..1701258,1705064..1705123,1707872..1707998,1708682..1708803,1710879..1711331,1712386..1712460,1712766..1712855,1713548..1713633,1714251..1714302,1714665..1714689,1715172..1715183,1715990..1716001,1716890..1717065,1717797..1717851,1718339..1718395,1719174..1719251,1720697..1720721,1722059..1722122,1732084..1732128,1732312..1732358))
location: region:1698019-1732358:-1
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position:1732358:-1
position: 1732358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

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position:1732312:-1
position: 1732312
reference: sequence
type: ReverseStrandPosition
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SIO_000628: feature:1698019-1698663:-1:exon

SGIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SGIP1
product: SH3GL interacting endocytic adaptor 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032192109.1
SIO_010081: SGIP1
subclass of: SO_0000673
so part of: SGIP1
location: complement(join(1698019..1698663,1698856..1699020,1699533..1699597,1699850..1700052,1700320..1700452,1700846..1701001,1701147..1701258,1707872..1707998,1708682..1708803,1710879..1711331,1712386..1712460,1712766..1712855,1713548..1713633,1714251..1714302,1714665..1714689,1715172..1715183,1715990..1716001,1716890..1717065,1717797..1717851,1718339..1718395,1720697..1720721,1722059..1722122,1732084..1732223))
location: region:1698019-1732223:-1
so has part: feature:1732084-1732223:-1:exon
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position:1732223:-1
position: 1732223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

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SIO_000628: feature:1698019-1698663:-1:exon

SGIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SGIP1
product: SH3GL interacting endocytic adaptor 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032192108.1
SIO_010081: SGIP1
subclass of: SO_0000673
so part of: SGIP1
location: complement(join(1698019..1698663,1698856..1699020,1699533..1699597,1699850..1700052,1700320..1700452,1700846..1701001,1701147..1701258,1705064..1705123,1707872..1707998,1708682..1708803,1710879..1711331,1712386..1712460,1712766..1712855,1713548..1713633,1714251..1714302,1714665..1714689,1715172..1715183,1715990..1716001,1716890..1717065,1717797..1717851,1718339..1718395,1720697..1720721,1722059..1722122,1732084..1732223))
location: region:1698019-1732223:-1
so has part: feature:1732084-1732223:-1:exon
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urn:…
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SIO_000628: feature:1698019-1698663:-1:exon

SGIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: SGIP1
product: SH3GL interacting endocytic adaptor 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032192106.1
SIO_010081: SGIP1
subclass of: SO_0000673
so part of: SGIP1
location: complement(join(1698019..1698663,1698856..1699020,1699533..1699597,1699850..1700052,1700320..1700452,1700846..1701001,1701147..1701258,1707872..1707998,1708682..1708803,1710879..1711331,1712386..1712460,1712766..1712855,1713548..1713633,1714251..1714302,1714665..1714689,1715172..1715183,1715990..1716001,1716890..1717065,1717797..1717851,1718339..1718395,1719174..1719251,1720697..1720721,1722059..1722122,1732084..1732223))
location: region:1698019-1732223:-1
so has part: feature:1732084-1732223:-1:exon
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urn:…
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urn:…
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SGIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SGIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3-containing GRB2-like protein 3-interacting protein 1 isoform X4
translation: MMEGLKKRTRKAFGIRKKEKDTDSTGSPDRDGIKKSNGAPNGFYAEIDWDRYNSPELDEEGYSIRPEEPGSTRGKHFYSSSESEEEEEAHKKFNIKIKPLQAKDILKSAATVDELKASVGNIALSPSPVRKSPRRSPGTIKRNLSSEEIARPRRSTPTPDPSSRKPPEDPAALAPLFGPPLESAFEEQKLDAPLDQPEIWGSIQPPNSADSPKLPRPFPTGTPPPLPPKNVPATPPRTGSPLTVAPGSDQPAAEAKSDKVPSINDLDSIFGPVLSPKSVAVHTGDKWVNFSDPSPENATVAPRPREKAAAAASPPAGAAGSPVAEPPRALPSPLRLEELQKKVLEQPKEENAEPAAASPKDFGPGQRATPPPPPPPTYRTVVSSPGPGASSGAGSPSGSSSPARPGTPLAACGTPPPPPPRPPSRPKLPPGKPAVADLSRPFSPPIHSSSPPPIAPLARAESTSSISSTNSLSAATTPTVGSSRGPSPLTMGAQDTLPVAAAFTETVNAYFKGADPSKCIVKITGEMVLSFPAGITRHFANNPAPAVLTFRVLNYNRLEHVLPNPQLLCCDSTQSDASTKEFWVNMPNLMTHLKKVSEQKPQATYYNVDMLKYQVSAQGIQSTPLNLAVSWRCDPASTDLRIDYKYNTEAMTTPVALNNVQFLVPVDGGVTKLQAVLPPAVWNAEQQRILWKIPDISQKSENGGVGSLLARFQLSEGPSVPAPLAVQFTSEGSTLSSCDIELVGAGYRFSLIKKRFAAGKYLADN
SIO_010081: SGIP1
subclass of: SO_0000673
so part of: SGIP1
location: complement(join(1698641..1698663,1698856..1699020,1699533..1699597,1699850..1700052,1700320..1700452,1700846..1701001,1701147..1701258,1707872..1707998,1708682..1708803,1710879..1711331,1712386..1712460,1712766..1712855,1713548..1713633,1714251..1714302,1714665..1714689,1715172..1715183,1715990..1716001,1716890..1717065,1717797..1717851,1718339..1718395,1720697..1720721,1722059..1722122,1732084..1732093))
location: region:1698641-1732093:-1
so has part: feature:1732084-1732093:-1:exon
so has part: feature:1722059-1722122:-1:exon
so has part: feature:1720697-1720721:-1:exon
so has part: feature:1718339-1718395:-1:exon
so has part: feature:1717797-1717851:-1:exon
so has part: feature:1716890-1717065:-1:exon
so has part: feature:1715990-1716001:-1:exon
so has part: feature:1715172-1715183:-1:exon
so has part: feature:1714665-1714689:-1:exon
so has part: feature:1714251-1714302:-1:exon
so has part: feature:1713548-1713633:-1:exon
so has part: feature:1712766-1712855:-1:exon
so has part: feature:1712386-1712460:-1:exon
so has part: feature:1710879-1711331:-1:exon
so has part: feature:1708682-1708803:-1:exon
so has part: feature:1707872-1707998:-1:exon
so has part: feature:1701147-1701258:-1:exon
so has part: feature:1700846-1701001:-1:exon
so has part: feature:1700320-1700452:-1:exon
so has part: feature:1699850-1700052:-1:exon
so has part: feature:1699533-1699597:-1:exon
so has part: feature:1698856-1699020:-1:exon
so has part: feature:1698641-1698663:-1:exon

XP_032048000.1
type: Protein
SIO_000068: ncbiprotein

position:1698641:-1
position: 1698641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1732093:-1
position: 1732093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1732084-1732093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1722059-1722122:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1720697-1720721:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1718339-1718395:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1717797-1717851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1716890-1717065:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1715990-1716001:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1715172-1715183:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1714665-1714689:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1714251-1714302:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1713548-1713633:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1712766-1712855:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1712386-1712460:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1710879-1711331:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1708682-1708803:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1707872-1707998:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1701147-1701258:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1700846-1701001:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1700320-1700452:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1699850-1700052:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1699533-1699597:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1698856-1699020:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1698641-1698663:-1:exon

SGIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SGIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3-containing GRB2-like protein 3-interacting protein 1 isoform X3
translation: MMEGLKKRTRKAFGIRKKEKDTDSTGSPDRDGIKKSNGAPNGFYAEIDWDRYNSPELDEEGYSIRPEEPGSTRGKHFYSSSESEEEEEAHKKFNIKIKPLQAKDILKSAATVDELKASVGNIALSPSPVRKSPRRSPGTIKRNLSSEEIARPRRSTPTPDPSSRKPPEDPAALAPLFGPPLESAFEEQKLDAPLDQPEIWGSIQPPNSADSPKLPRPFPTGTPPPLPPKNVPATPPRTGSPLTVAPGSDQPAAEAKSDKVPSINDLDSIFGPVLSPKSVAVHTGDKWVNFSDPSPENATVAPRPREKAAAAASPPAGAAGSPVAEPPRALPSPLRLEELQKKVLEQPKEENAEPAAASPKDFGPGQRATPPPPPPPTYRTVVSSPGPGASSGAGSPSGSSSPARPGTPLAACGTPPPPPPRPPSRPKLPPGKPAVADLSRPFSPPIHSSSPPPIAPLARAESTSSISSTNSLSAATTPTVENEQPSLVWFDRGKFYLTFEGSSRGPSPLTMGAQDTLPVAAAFTETVNAYFKGADPSKCIVKITGEMVLSFPAGITRHFANNPAPAVLTFRVLNYNRLEHVLPNPQLLCCDSTQSDASTKEFWVNMPNLMTHLKKVSEQKPQATYYNVDMLKYQVSAQGIQSTPLNLAVSWRCDPASTDLRIDYKYNTEAMTTPVALNNVQFLVPVDGGVTKLQAVLPPAVWNAEQQRILWKIPDISQKSENGGVGSLLARFQLSEGPSVPAPLAVQFTSEGSTLSSCDIELVGAGYRFSLIKKRFAAGKYLADN
SIO_010081: SGIP1
subclass of: SO_0000673
so part of: SGIP1
location: complement(join(1698641..1698663,1698856..1699020,1699533..1699597,1699850..1700052,1700320..1700452,1700846..1701001,1701147..1701258,1705064..1705123,1707872..1707998,1708682..1708803,1710879..1711331,1712386..1712460,1712766..1712855,1713548..1713633,1714251..1714302,1714665..1714689,1715172..1715183,1715990..1716001,1716890..1717065,1717797..1717851,1718339..1718395,1720697..1720721,1722059..1722122,1732084..1732093))
location: region:1698641-1732093:-1
so has part: feature:1732084-1732093:-1:exon
so has part: feature:1722059-1722122:-1:exon
so has part: feature:1720697-1720721:-1:exon
so has part: feature:1718339-1718395:-1:exon
so has part: feature:1717797-1717851:-1:exon
so has part: feature:1716890-1717065:-1:exon
so has part: feature:1715990-1716001:-1:exon
so has part: feature:1715172-1715183:-1:exon
so has part: feature:1714665-1714689:-1:exon
so has part: feature:1714251-1714302:-1:exon
so has part: feature:1713548-1713633:-1:exon
so has part: feature:1712766-1712855:-1:exon
so has part: feature:1712386-1712460:-1:exon
so has part: feature:1710879-1711331:-1:exon
so has part: feature:1708682-1708803:-1:exon
so has part: feature:1707872-1707998:-1:exon
so has part: feature:1705064-1705123:-1:exon
so has part: feature:1701147-1701258:-1:exon
so has part: feature:1700846-1701001:-1:exon
so has part: feature:1700320-1700452:-1:exon
so has part: feature:1699850-1700052:-1:exon
so has part: feature:1699533-1699597:-1:exon
so has part: feature:1698856-1699020:-1:exon
so has part: feature:1698641-1698663:-1:exon

XP_032047999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1732084-1732093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1722059-1722122:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1720697-1720721:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1718339-1718395:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1717797-1717851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1716890-1717065:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1715990-1716001:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1715172-1715183:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1714665-1714689:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1714251-1714302:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1713548-1713633:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1712766-1712855:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1712386-1712460:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1710879-1711331:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1708682-1708803:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1707872-1707998:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1705064-1705123:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1701147-1701258:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1700846-1701001:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1700320-1700452:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1699850-1700052:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1699533-1699597:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1698856-1699020:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1698641-1698663:-1:exon

SGIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SGIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3-containing GRB2-like protein 3-interacting protein 1 isoform X2
translation: MMEGLKKRTRKAFGIRKKEKDTDSTGSPDRDGIPLSPHPTEPPCHSKPDSVREGGKKNLKKSNGAPNGFYAEIDWDRYNSPELDEEGYSIRPEEPGSTRGKHFYSSSESEEEEEAHKKFNIKIKPLQAKDILKSAATVDELKASVGNIALSPSPVRKSPRRSPGTIKRNLSSEEIARPRRSTPTPDPSSRKPPEDPAALAPLFGPPLESAFEEQKLDAPLDQPEIWGSIQPPNSADSPKLPRPFPTGTPPPLPPKNVPATPPRTGSPLTVAPGSDQPAAEAKSDKVPSINDLDSIFGPVLSPKSVAVHTGDKWVNFSDPSPENATVAPRPREKAAAAASPPAGAAGSPVAEPPRALPSPLRLEELQKKVLEQPKEENAEPAAASPKDFGPGQRATPPPPPPPTYRTVVSSPGPGASSGAGSPSGSSSPARPGTPLAACGTPPPPPPRPPSRPKLPPGKPAVADLSRPFSPPIHSSSPPPIAPLARAESTSSISSTNSLSAATTPTVGSSRGPSPLTMGAQDTLPVAAAFTETVNAYFKGADPSKCIVKITGEMVLSFPAGITRHFANNPAPAVLTFRVLNYNRLEHVLPNPQLLCCDSTQSDASTKEFWVNMPNLMTHLKKVSEQKPQATYYNVDMLKYQVSAQGIQSTPLNLAVSWRCDPASTDLRIDYKYNTEAMTTPVALNNVQFLVPVDGGVTKLQAVLPPAVWNAEQQRILWKIPDISQKSENGGVGSLLARFQLSEGPSVPAPLAVQFTSEGSTLSSCDIELVGAGYRFSLIKKRFAAGKYLADN
SIO_010081: SGIP1
subclass of: SO_0000673
so part of: SGIP1
location: complement(join(1698641..1698663,1698856..1699020,1699533..1699597,1699850..1700052,1700320..1700452,1700846..1701001,1701147..1701258,1707872..1707998,1708682..1708803,1710879..1711331,1712386..1712460,1712766..1712855,1713548..1713633,1714251..1714302,1714665..1714689,1715172..1715183,1715990..1716001,1716890..1717065,1717797..1717851,1718339..1718395,1719174..1719251,1720697..1720721,1722059..1722122,1732084..1732093))
location: region:1698641-1732093:-1
so has part: feature:1732084-1732093:-1:exon
so has part: feature:1722059-1722122:-1:exon
so has part: feature:1720697-1720721:-1:exon
so has part: feature:1719174-1719251:-1:exon
so has part: feature:1718339-1718395:-1:exon
so has part: feature:1717797-1717851:-1:exon
so has part: feature:1716890-1717065:-1:exon
so has part: feature:1715990-1716001:-1:exon
so has part: feature:1715172-1715183:-1:exon
so has part: feature:1714665-1714689:-1:exon
so has part: feature:1714251-1714302:-1:exon
so has part: feature:1713548-1713633:-1:exon
so has part: feature:1712766-1712855:-1:exon
so has part: feature:1712386-1712460:-1:exon
so has part: feature:1710879-1711331:-1:exon
so has part: feature:1708682-1708803:-1:exon
so has part: feature:1707872-1707998:-1:exon
so has part: feature:1701147-1701258:-1:exon
so has part: feature:1700846-1701001:-1:exon
so has part: feature:1700320-1700452:-1:exon
so has part: feature:1699850-1700052:-1:exon
so has part: feature:1699533-1699597:-1:exon
so has part: feature:1698856-1699020:-1:exon
so has part: feature:1698641-1698663:-1:exon

XP_032047997.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1732084-1732093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1722059-1722122:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1720697-1720721:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1719174-1719251:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1718339-1718395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1717797-1717851:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1716890-1717065:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1715990-1716001:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1715172-1715183:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1714665-1714689:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1714251-1714302:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1713548-1713633:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1712766-1712855:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1712386-1712460:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1710879-1711331:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1708682-1708803:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1707872-1707998:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1701147-1701258:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1700846-1701001:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1700320-1700452:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1699850-1700052:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1699533-1699597:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1698856-1699020:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1698641-1698663:-1:exon

SGIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SGIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3-containing GRB2-like protein 3-interacting protein 1 isoform X1
translation: MMEGLKKRTRKAFGIRKKEKDTDSTGSPDRDGIPLSPHPTEPPCHSKPDSVREGGKKNLKKSNGAPNGFYAEIDWDRYNSPELDEEGYSIRPEEPGSTRGKHFYSSSESEEEEEAHKKFNIKIKPLQAKDILKSAATVDELKASVGNIALSPSPVRKSPRRSPGTIKRNLSSEEIARPRRSTPTPDPSSRKPPEDPAALAPLFGPPLESAFEEQKLDAPLDQPEIWGSIQPPNSADSPKLPRPFPTGTPPPLPPKNVPATPPRTGSPLTVAPGSDQPAAEAKSDKVPSINDLDSIFGPVLSPKSVAVHTGDKWVNFSDPSPENATVAPRPREKAAAAASPPAGAAGSPVAEPPRALPSPLRLEELQKKVLEQPKEENAEPAAASPKDFGPGQRATPPPPPPPTYRTVVSSPGPGASSGAGSPSGSSSPARPGTPLAACGTPPPPPPRPPSRPKLPPGKPAVADLSRPFSPPIHSSSPPPIAPLARAESTSSISSTNSLSAATTPTVENEQPSLVWFDRGKFYLTFEGSSRGPSPLTMGAQDTLPVAAAFTETVNAYFKGADPSKCIVKITGEMVLSFPAGITRHFANNPAPAVLTFRVLNYNRLEHVLPNPQLLCCDSTQSDASTKEFWVNMPNLMTHLKKVSEQKPQATYYNVDMLKYQVSAQGIQSTPLNLAVSWRCDPASTDLRIDYKYNTEAMTTPVALNNVQFLVPVDGGVTKLQAVLPPAVWNAEQQRILWKIPDISQKSENGGVGSLLARFQLSEGPSVPAPLAVQFTSEGSTLSSCDIELVGAGYRFSLIKKRFAAGKYLADN
SIO_010081: SGIP1
subclass of: SO_0000673
so part of: SGIP1
location: complement(join(1698641..1698663,1698856..1699020,1699533..1699597,1699850..1700052,1700320..1700452,1700846..1701001,1701147..1701258,1705064..1705123,1707872..1707998,1708682..1708803,1710879..1711331,1712386..1712460,1712766..1712855,1713548..1713633,1714251..1714302,1714665..1714689,1715172..1715183,1715990..1716001,1716890..1717065,1717797..1717851,1718339..1718395,1719174..1719251,1720697..1720721,1722059..1722122,1732084..1732093))
location: region:1698641-1732093:-1
so has part: feature:1732084-1732093:-1:exon
so has part: feature:1722059-1722122:-1:exon
so has part: feature:1720697-1720721:-1:exon
so has part: feature:1719174-1719251:-1:exon
so has part: feature:1718339-1718395:-1:exon
so has part: feature:1717797-1717851:-1:exon
so has part: feature:1716890-1717065:-1:exon
so has part: feature:1715990-1716001:-1:exon
so has part: feature:1715172-1715183:-1:exon
so has part: feature:1714665-1714689:-1:exon
so has part: feature:1714251-1714302:-1:exon
so has part: feature:1713548-1713633:-1:exon
so has part: feature:1712766-1712855:-1:exon
so has part: feature:1712386-1712460:-1:exon
so has part: feature:1710879-1711331:-1:exon
so has part: feature:1708682-1708803:-1:exon
so has part: feature:1707872-1707998:-1:exon
so has part: feature:1705064-1705123:-1:exon
so has part: feature:1701147-1701258:-1:exon
so has part: feature:1700846-1701001:-1:exon
so has part: feature:1700320-1700452:-1:exon
so has part: feature:1699850-1700052:-1:exon
so has part: feature:1699533-1699597:-1:exon
so has part: feature:1698856-1699020:-1:exon
so has part: feature:1698641-1698663:-1:exon

XP_032047994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1732084-1732093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1722059-1722122:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1720697-1720721:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1719174-1719251:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1718339-1718395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1717797-1717851:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1716890-1717065:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1715990-1716001:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1715172-1715183:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1714665-1714689:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1714251-1714302:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1713548-1713633:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1712766-1712855:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1712386-1712460:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1710879-1711331:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1708682-1708803:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1707872-1707998:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1705064-1705123:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1701147-1701258:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1700846-1701001:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1700320-1700452:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1699850-1700052:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1699533-1699597:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1698856-1699020:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1698641-1698663:-1:exon

SGIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SGIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3-containing GRB2-like protein 3-interacting protein 1 isoform X1
translation: MMEGLKKRTRKAFGIRKKEKDTDSTGSPDRDGIPLSPHPTEPPCHSKPDSVREGGKKNLKKSNGAPNGFYAEIDWDRYNSPELDEEGYSIRPEEPGSTRGKHFYSSSESEEEEEAHKKFNIKIKPLQAKDILKSAATVDELKASVGNIALSPSPVRKSPRRSPGTIKRNLSSEEIARPRRSTPTPDPSSRKPPEDPAALAPLFGPPLESAFEEQKLDAPLDQPEIWGSIQPPNSADSPKLPRPFPTGTPPPLPPKNVPATPPRTGSPLTVAPGSDQPAAEAKSDKVPSINDLDSIFGPVLSPKSVAVHTGDKWVNFSDPSPENATVAPRPREKAAAAASPPAGAAGSPVAEPPRALPSPLRLEELQKKVLEQPKEENAEPAAASPKDFGPGQRATPPPPPPPTYRTVVSSPGPGASSGAGSPSGSSSPARPGTPLAACGTPPPPPPRPPSRPKLPPGKPAVADLSRPFSPPIHSSSPPPIAPLARAESTSSISSTNSLSAATTPTVENEQPSLVWFDRGKFYLTFEGSSRGPSPLTMGAQDTLPVAAAFTETVNAYFKGADPSKCIVKITGEMVLSFPAGITRHFANNPAPAVLTFRVLNYNRLEHVLPNPQLLCCDSTQSDASTKEFWVNMPNLMTHLKKVSEQKPQATYYNVDMLKYQVSAQGIQSTPLNLAVSWRCDPASTDLRIDYKYNTEAMTTPVALNNVQFLVPVDGGVTKLQAVLPPAVWNAEQQRILWKIPDISQKSENGGVGSLLARFQLSEGPSVPAPLAVQFTSEGSTLSSCDIELVGAGYRFSLIKKRFAAGKYLADN
SIO_010081: SGIP1
subclass of: SO_0000673
so part of: SGIP1
location: complement(join(1698641..1698663,1698856..1699020,1699533..1699597,1699850..1700052,1700320..1700452,1700846..1701001,1701147..1701258,1705064..1705123,1707872..1707998,1708682..1708803,1710879..1711331,1712386..1712460,1712766..1712855,1713548..1713633,1714251..1714302,1714665..1714689,1715172..1715183,1715990..1716001,1716890..1717065,1717797..1717851,1718339..1718395,1719174..1719251,1720697..1720721,1722059..1722122,1732084..1732093))
location: region:1698641-1732093:-1
so has part: feature:1732084-1732093:-1:exon
so has part: feature:1722059-1722122:-1:exon
so has part: feature:1720697-1720721:-1:exon
so has part: feature:1719174-1719251:-1:exon
so has part: feature:1718339-1718395:-1:exon
so has part: feature:1717797-1717851:-1:exon
so has part: feature:1716890-1717065:-1:exon
so has part: feature:1715990-1716001:-1:exon
so has part: feature:1715172-1715183:-1:exon
so has part: feature:1714665-1714689:-1:exon
so has part: feature:1714251-1714302:-1:exon
so has part: feature:1713548-1713633:-1:exon
so has part: feature:1712766-1712855:-1:exon
so has part: feature:1712386-1712460:-1:exon
so has part: feature:1710879-1711331:-1:exon
so has part: feature:1708682-1708803:-1:exon
so has part: feature:1707872-1707998:-1:exon
so has part: feature:1705064-1705123:-1:exon
so has part: feature:1701147-1701258:-1:exon
so has part: feature:1700846-1701001:-1:exon
so has part: feature:1700320-1700452:-1:exon
so has part: feature:1699850-1700052:-1:exon
so has part: feature:1699533-1699597:-1:exon
so has part: feature:1698856-1699020:-1:exon
so has part: feature:1698641-1698663:-1:exon

XP_032047995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1732084-1732093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1722059-1722122:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1720697-1720721:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1719174-1719251:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1718339-1718395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1717797-1717851:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1716890-1717065:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1715990-1716001:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1715172-1715183:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1714665-1714689:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1714251-1714302:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1713548-1713633:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1712766-1712855:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1712386-1712460:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1710879-1711331:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1708682-1708803:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1707872-1707998:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1705064-1705123:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1701147-1701258:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1700846-1701001:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1700320-1700452:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1699850-1700052:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1699533-1699597:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1698856-1699020:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1698641-1698663:-1:exon

SGIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: SGIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3-containing GRB2-like protein 3-interacting protein 1 isoform X1
translation: MMEGLKKRTRKAFGIRKKEKDTDSTGSPDRDGIPLSPHPTEPPCHSKPDSVREGGKKNLKKSNGAPNGFYAEIDWDRYNSPELDEEGYSIRPEEPGSTRGKHFYSSSESEEEEEAHKKFNIKIKPLQAKDILKSAATVDELKASVGNIALSPSPVRKSPRRSPGTIKRNLSSEEIARPRRSTPTPDPSSRKPPEDPAALAPLFGPPLESAFEEQKLDAPLDQPEIWGSIQPPNSADSPKLPRPFPTGTPPPLPPKNVPATPPRTGSPLTVAPGSDQPAAEAKSDKVPSINDLDSIFGPVLSPKSVAVHTGDKWVNFSDPSPENATVAPRPREKAAAAASPPAGAAGSPVAEPPRALPSPLRLEELQKKVLEQPKEENAEPAAASPKDFGPGQRATPPPPPPPTYRTVVSSPGPGASSGAGSPSGSSSPARPGTPLAACGTPPPPPPRPPSRPKLPPGKPAVADLSRPFSPPIHSSSPPPIAPLARAESTSSISSTNSLSAATTPTVENEQPSLVWFDRGKFYLTFEGSSRGPSPLTMGAQDTLPVAAAFTETVNAYFKGADPSKCIVKITGEMVLSFPAGITRHFANNPAPAVLTFRVLNYNRLEHVLPNPQLLCCDSTQSDASTKEFWVNMPNLMTHLKKVSEQKPQATYYNVDMLKYQVSAQGIQSTPLNLAVSWRCDPASTDLRIDYKYNTEAMTTPVALNNVQFLVPVDGGVTKLQAVLPPAVWNAEQQRILWKIPDISQKSENGGVGSLLARFQLSEGPSVPAPLAVQFTSEGSTLSSCDIELVGAGYRFSLIKKRFAAGKYLADN
SIO_010081: SGIP1
subclass of: SO_0000673
so part of: SGIP1
location: complement(join(1698641..1698663,1698856..1699020,1699533..1699597,1699850..1700052,1700320..1700452,1700846..1701001,1701147..1701258,1705064..1705123,1707872..1707998,1708682..1708803,1710879..1711331,1712386..1712460,1712766..1712855,1713548..1713633,1714251..1714302,1714665..1714689,1715172..1715183,1715990..1716001,1716890..1717065,1717797..1717851,1718339..1718395,1719174..1719251,1720697..1720721,1722059..1722122,1732084..1732093))
location: region:1698641-1732093:-1
so has part: feature:1732084-1732093:-1:exon
so has part: feature:1722059-1722122:-1:exon
so has part: feature:1720697-1720721:-1:exon
so has part: feature:1719174-1719251:-1:exon
so has part: feature:1718339-1718395:-1:exon
so has part: feature:1717797-1717851:-1:exon
so has part: feature:1716890-1717065:-1:exon
so has part: feature:1715990-1716001:-1:exon
so has part: feature:1715172-1715183:-1:exon
so has part: feature:1714665-1714689:-1:exon
so has part: feature:1714251-1714302:-1:exon
so has part: feature:1713548-1713633:-1:exon
so has part: feature:1712766-1712855:-1:exon
so has part: feature:1712386-1712460:-1:exon
so has part: feature:1710879-1711331:-1:exon
so has part: feature:1708682-1708803:-1:exon
so has part: feature:1707872-1707998:-1:exon
so has part: feature:1705064-1705123:-1:exon
so has part: feature:1701147-1701258:-1:exon
so has part: feature:1700846-1701001:-1:exon
so has part: feature:1700320-1700452:-1:exon
so has part: feature:1699850-1700052:-1:exon
so has part: feature:1699533-1699597:-1:exon
so has part: feature:1698856-1699020:-1:exon
so has part: feature:1698641-1698663:-1:exon

XP_032047996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1732084-1732093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1722059-1722122:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1720697-1720721:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1719174-1719251:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1718339-1718395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1717797-1717851:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1716890-1717065:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1715990-1716001:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1715172-1715183:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1714665-1714689:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1714251-1714302:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1713548-1713633:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1712766-1712855:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1712386-1712460:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1710879-1711331:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1708682-1708803:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1707872-1707998:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1705064-1705123:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1701147-1701258:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1700846-1701001:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1700320-1700452:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1699850-1700052:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1699533-1699597:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1698856-1699020:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1698641-1698663:-1:exon

PDE4B
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: PDE4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1741517..1895403)
location: region:1741517-1895403:-1
so has part: feature:1741517-1895403:-1:exon
subclass of: SO_0000010

116491974
type: Gene
SIO_000068: ncbigene

position:1741517:-1
position: 1741517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1895403:-1
position: 1895403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1741517-1895403:-1:exon

PDE4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: PDE4B
product: phosphodiesterase 4B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032192353.1
SIO_010081: PDE4B
subclass of: SO_0000673
so part of: PDE4B
location: complement(join(1741517..1743564,1746363..1746545,1747615..1747737,1747829..1747983,1748684..1748783,1749214..1749378,1749519..1749617,1750194..1750372,1753815..1753908,1768222..1768334,1794793..1794842,1798056..1798126,1798210..1798246,1799843..1800037,1892500..1892735,1895354..1895403))
location: region:1741517-1895403:-1
so has part: feature:1895354-1895403:-1:exon
so has part: feature:1892500-1892735:-1:exon
so has part: feature:1799843-1800037:-1:exon
so has part: feature:1798210-1798246:-1:exon
so has part: feature:1798056-1798126:-1:exon
so has part: feature:1794793-1794842:-1:exon
so has part: feature:1768222-1768334:-1:exon
so has part: feature:1753815-1753908:-1:exon
so has part: feature:1750194-1750372:-1:exon
so has part: feature:1749519-1749617:-1:exon
so has part: feature:1749214-1749378:-1:exon
so has part: feature:1748684-1748783:-1:exon
so has part: feature:1747829-1747983:-1:exon
so has part: feature:1747615-1747737:-1:exon
so has part: feature:1746363-1746545:-1:exon
so has part: feature:1741517-1743564:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1895354-1895403:-1:exon

position:1895354:-1
position: 1895354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1892500-1892735:-1:exon

position:1892500:-1
position: 1892500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1892735:-1
position: 1892735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1799843-1800037:-1:exon

position:1799843:-1
position: 1799843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1800037:-1
position: 1800037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1798210-1798246:-1:exon

position:1798210:-1
position: 1798210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1798246:-1
position: 1798246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1798056-1798126:-1:exon

position:1798056:-1
position: 1798056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1798126:-1
position: 1798126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1794793-1794842:-1:exon

position:1794793:-1
position: 1794793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1794842:-1
position: 1794842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1768222-1768334:-1:exon

position:1768222:-1
position: 1768222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1768334:-1
position: 1768334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1753815-1753908:-1:exon

position:1753815:-1
position: 1753815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1753908:-1
position: 1753908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1750194-1750372:-1:exon

position:1750194:-1
position: 1750194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1750372:-1
position: 1750372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1749519-1749617:-1:exon

position:1749519:-1
position: 1749519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1749617:-1
position: 1749617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1749214-1749378:-1:exon

position:1749214:-1
position: 1749214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1749378:-1
position: 1749378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1748684-1748783:-1:exon

position:1748684:-1
position: 1748684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1748783:-1
position: 1748783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1747829-1747983:-1:exon

position:1747829:-1
position: 1747829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1747983:-1
position: 1747983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1747615-1747737:-1:exon

position:1747615:-1
position: 1747615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1747737:-1
position: 1747737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1746363-1746545:-1:exon

position:1746363:-1
position: 1746363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1746545:-1
position: 1746545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1741517-1743564:-1:exon

position:1743564:-1
position: 1743564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PDE4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: PDE4B
product: phosphodiesterase 4B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032192354.1
SIO_010081: PDE4B
subclass of: SO_0000673
so part of: PDE4B
location: complement(join(1741517..1743564,1746363..1746545,1747615..1747737,1747829..1747983,1748684..1748783,1749214..1749378,1749519..1749617,1750194..1750372,1753815..1753908,1768222..1768334,1794793..1794842,1798056..1798126,1798210..1798246,1799843..1800037,1875958..1876463))
location: region:1741517-1876463:-1
so has part: feature:1875958-1876463:-1:exon
so has part: feature:1799843-1800037:-1:exon
so has part: feature:1798210-1798246:-1:exon
so has part: feature:1798056-1798126:-1:exon
so has part: feature:1794793-1794842:-1:exon
so has part: feature:1768222-1768334:-1:exon
so has part: feature:1753815-1753908:-1:exon
so has part: feature:1750194-1750372:-1:exon
so has part: feature:1749519-1749617:-1:exon
so has part: feature:1749214-1749378:-1:exon
so has part: feature:1748684-1748783:-1:exon
so has part: feature:1747829-1747983:-1:exon
so has part: feature:1747615-1747737:-1:exon
so has part: feature:1746363-1746545:-1:exon
so has part: feature:1741517-1743564:-1:exon

position:1876463:-1
position: 1876463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1875958-1876463:-1:exon

position:1875958:-1
position: 1875958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1799843-1800037:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1798210-1798246:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1798056-1798126:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1794793-1794842:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1768222-1768334:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1753815-1753908:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1750194-1750372:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1749519-1749617:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1749214-1749378:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1748684-1748783:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1747829-1747983:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1747615-1747737:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1746363-1746545:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1741517-1743564:-1:exon

PDE4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: PDE4B
product: phosphodiesterase 4B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032192355.1
SIO_010081: PDE4B
subclass of: SO_0000673
so part of: PDE4B
location: complement(join(1741517..1743564,1746363..1746545,1747615..1747737,1747829..1747983,1748684..1748783,1749214..1749378,1749519..1749617,1750194..1750372,1753815..1753908,1754671..1755402))
location: region:1741517-1755402:-1
so has part: feature:1754671-1755402:-1:exon
so has part: feature:1753815-1753908:-1:exon
so has part: feature:1750194-1750372:-1:exon
so has part: feature:1749519-1749617:-1:exon
so has part: feature:1749214-1749378:-1:exon
so has part: feature:1748684-1748783:-1:exon
so has part: feature:1747829-1747983:-1:exon
so has part: feature:1747615-1747737:-1:exon
so has part: feature:1746363-1746545:-1:exon
so has part: feature:1741517-1743564:-1:exon

position:1755402:-1
position: 1755402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1754671-1755402:-1:exon

position:1754671:-1
position: 1754671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1753815-1753908:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1750194-1750372:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1749519-1749617:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1749214-1749378:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1748684-1748783:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1747829-1747983:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1747615-1747737:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1746363-1746545:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1741517-1743564:-1:exon

PDE4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: PDE4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cAMP-specific 3',5'-cyclic phosphodiesterase 4B isoform X1
translation: MKKSRSVMTVTADENALDYLECGLSKSYSTSSHALGIDLWRGRRCCSGNLQLPPLSQRQTEKARTPDRDIVCRPTTLPLLTPPSIAITTYQDCFDVENGPSPGRSPLDPQASSSSGLVLHTAFPGHSQRRESFLYRSDSDYDLSPKTMSRNSSLPSEQHGDDLIVTPFAQVLASLRSVRNNFTLLTNLHGTANKRSPATSQPPVSRVNLQEEPYQKLAMETLEELDWCLDQLETIQTYRSVSEMASNKFKRMLNRELTHLSEMSRSGNQVSEYISNTFLDKQNDVEIPSPTQKDREKKKKQQLMTQISGVKKLMHSSSLNNTSISRFGVKTEKEDHLAKELEDLNKWGLNIFNVARYSHNRPLTCIMYAIFQERDLLKTFKISSDTFVTYMMTLEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVSNQFLINTNSELALMYNDESVLENHHLAVGFKLLQEEHCDIFQNLTKKQRQTLRKMVIDMVLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHCADLSNPTKSLELYRQWTDRIMEEFFQQGDKERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWETWADLVQPDAQDILDTLEDNRNWYQSMIPQSPSPPLEERSRDCQGLMEKFQFELTLEEEDSDGPEKEGEGIGYFSNTKTLCVDEPGEKESQREANIEIVTEDTSPVDT
SIO_010081: PDE4B
subclass of: SO_0000673
so part of: PDE4B
location: complement(join(1743199..1743564,1746363..1746545,1747615..1747737,1747829..1747983,1748684..1748783,1749214..1749378,1749519..1749617,1750194..1750372,1753815..1753908,1768222..1768334,1794793..1794842,1798056..1798126,1798210..1798246,1799843..1800037,1892500..1892735,1895354..1895395))
location: region:1743199-1895395:-1
so has part: feature:1895354-1895395:-1:exon
so has part: feature:1892500-1892735:-1:exon
so has part: feature:1799843-1800037:-1:exon
so has part: feature:1798210-1798246:-1:exon
so has part: feature:1798056-1798126:-1:exon
so has part: feature:1794793-1794842:-1:exon
so has part: feature:1768222-1768334:-1:exon
so has part: feature:1753815-1753908:-1:exon
so has part: feature:1750194-1750372:-1:exon
so has part: feature:1749519-1749617:-1:exon
so has part: feature:1749214-1749378:-1:exon
so has part: feature:1748684-1748783:-1:exon
so has part: feature:1747829-1747983:-1:exon
so has part: feature:1747615-1747737:-1:exon
so has part: feature:1746363-1746545:-1:exon
so has part: feature:1743199-1743564:-1:exon

XP_032048244.1
type: Protein
SIO_000068: ncbiprotein

position:1743199:-1
position: 1743199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1895395:-1
position: 1895395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1895354-1895395:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1892500-1892735:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1799843-1800037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1798210-1798246:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1798056-1798126:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1794793-1794842:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1768222-1768334:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1753815-1753908:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1750194-1750372:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1749519-1749617:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1749214-1749378:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1748684-1748783:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1747829-1747983:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1747615-1747737:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1746363-1746545:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1743199-1743564:-1:exon

PDE4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: PDE4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cAMP-specific 3',5'-cyclic phosphodiesterase 4B isoform X2
translation: MTAKDSSRELATPETEIYIRTFKEQMHLELELPKLPGNRPTSPKISPRSSPRNSPCFFRKLLVNKSIRQRRRFTVAHTCFDVENGPSPGRSPLDPQASSSSGLVLHTAFPGHSQRRESFLYRSDSDYDLSPKTMSRNSSLPSEQHGDDLIVTPFAQVLASLRSVRNNFTLLTNLHGTANKRSPATSQPPVSRVNLQEEPYQKLAMETLEELDWCLDQLETIQTYRSVSEMASNKFKRMLNRELTHLSEMSRSGNQVSEYISNTFLDKQNDVEIPSPTQKDREKKKKQQLMTQISGVKKLMHSSSLNNTSISRFGVKTEKEDHLAKELEDLNKWGLNIFNVARYSHNRPLTCIMYAIFQERDLLKTFKISSDTFVTYMMTLEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVSNQFLINTNSELALMYNDESVLENHHLAVGFKLLQEEHCDIFQNLTKKQRQTLRKMVIDMVLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHCADLSNPTKSLELYRQWTDRIMEEFFQQGDKERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWETWADLVQPDAQDILDTLEDNRNWYQSMIPQSPSPPLEERSRDCQGLMEKFQFELTLEEEDSDGPEKEGEGIGYFSNTKTLCVDEPGEKESQREANIEIVTEDTSPVDT
SIO_010081: PDE4B
subclass of: SO_0000673
so part of: PDE4B
location: complement(join(1743199..1743564,1746363..1746545,1747615..1747737,1747829..1747983,1748684..1748783,1749214..1749378,1749519..1749617,1750194..1750372,1753815..1753908,1768222..1768334,1794793..1794842,1798056..1798126,1798210..1798246,1799843..1800037,1875958..1876193))
location: region:1743199-1876193:-1
so has part: feature:1875958-1876193:-1:exon
so has part: feature:1799843-1800037:-1:exon
so has part: feature:1798210-1798246:-1:exon
so has part: feature:1798056-1798126:-1:exon
so has part: feature:1794793-1794842:-1:exon
so has part: feature:1768222-1768334:-1:exon
so has part: feature:1753815-1753908:-1:exon
so has part: feature:1750194-1750372:-1:exon
so has part: feature:1749519-1749617:-1:exon
so has part: feature:1749214-1749378:-1:exon
so has part: feature:1748684-1748783:-1:exon
so has part: feature:1747829-1747983:-1:exon
so has part: feature:1747615-1747737:-1:exon
so has part: feature:1746363-1746545:-1:exon
so has part: feature:1743199-1743564:-1:exon

XP_032048245.1
type: Protein
SIO_000068: ncbiprotein

position:1876193:-1
position: 1876193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1875958-1876193:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1799843-1800037:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1798210-1798246:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1798056-1798126:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1794793-1794842:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1768222-1768334:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1753815-1753908:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1750194-1750372:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1749519-1749617:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1749214-1749378:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1748684-1748783:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1747829-1747983:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1747615-1747737:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1746363-1746545:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1743199-1743564:-1:exon

PDE4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: PDE4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cAMP-specific 3',5'-cyclic phosphodiesterase 4B isoform X3
translation: MPEANYLLSVSWGYIKFKRMLNRELTHLSEMSRSGNQVSEYISNTFLDKQNDVEIPSPTQKDREKKKKQQLMTQISGVKKLMHSSSLNNTSISRFGVKTEKEDHLAKELEDLNKWGLNIFNVARYSHNRPLTCIMYAIFQERDLLKTFKISSDTFVTYMMTLEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVSNQFLINTNSELALMYNDESVLENHHLAVGFKLLQEEHCDIFQNLTKKQRQTLRKMVIDMVLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHCADLSNPTKSLELYRQWTDRIMEEFFQQGDKERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWETWADLVQPDAQDILDTLEDNRNWYQSMIPQSPSPPLEERSRDCQGLMEKFQFELTLEEEDSDGPEKEGEGIGYFSNTKTLCVDEPGEKESQREANIEIVTEDTSPVDT
SIO_010081: PDE4B
subclass of: SO_0000673
so part of: PDE4B
location: complement(join(1743199..1743564,1746363..1746545,1747615..1747737,1747829..1747983,1748684..1748783,1749214..1749378,1749519..1749617,1750194..1750372,1753815..1753908,1754671..1754718))
location: region:1743199-1754718:-1
so has part: feature:1754671-1754718:-1:exon
so has part: feature:1753815-1753908:-1:exon
so has part: feature:1750194-1750372:-1:exon
so has part: feature:1749519-1749617:-1:exon
so has part: feature:1749214-1749378:-1:exon
so has part: feature:1748684-1748783:-1:exon
so has part: feature:1747829-1747983:-1:exon
so has part: feature:1747615-1747737:-1:exon
so has part: feature:1746363-1746545:-1:exon
so has part: feature:1743199-1743564:-1:exon

XP_032048246.1
type: Protein
SIO_000068: ncbiprotein

position:1754718:-1
position: 1754718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1754671-1754718:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1753815-1753908:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1750194-1750372:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1749519-1749617:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1749214-1749378:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1748684-1748783:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1747829-1747983:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1747615-1747737:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1746363-1746545:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1743199-1743564:-1:exon

LEPR
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LEPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1931479..1964902)
location: region:1931479-1964902:-1
so has part: feature:1931479-1964902:-1:exon
subclass of: SO_0000010

116492192
type: Gene
SIO_000068: ncbigene

position:1931479:-1
position: 1931479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1964902:-1
position: 1964902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1931479-1964902:-1:exon

LEPR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LEPR
product: leptin receptor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032192746.1
SIO_010081: LEPR
subclass of: SO_0000673
so part of: LEPR
location: complement(join(1931479..1932631,1937248..1937323,1938010..1938118,1938690..1938785,1939360..1939542,1940721..1940937,1941607..1941689,1941778..1941937,1942177..1942325,1944332..1944531,1946899..1947016,1947191..1947487,1949598..1949742,1949831..1949976,1951348..1951553,1956060..1956177,1957159..1957467,1960090..1960148,1964826..1964902))
location: region:1931479-1964902:-1
so has part: feature:1964826-1964902:-1:exon
so has part: feature:1960090-1960148:-1:exon
so has part: feature:1957159-1957467:-1:exon
so has part: feature:1956060-1956177:-1:exon
so has part: feature:1951348-1951553:-1:exon
so has part: feature:1949831-1949976:-1:exon
so has part: feature:1949598-1949742:-1:exon
so has part: feature:1947191-1947487:-1:exon
so has part: feature:1946899-1947016:-1:exon
so has part: feature:1944332-1944531:-1:exon
so has part: feature:1942177-1942325:-1:exon
so has part: feature:1941778-1941937:-1:exon
so has part: feature:1941607-1941689:-1:exon
so has part: feature:1940721-1940937:-1:exon
so has part: feature:1939360-1939542:-1:exon
so has part: feature:1938690-1938785:-1:exon
so has part: feature:1938010-1938118:-1:exon
so has part: feature:1937248-1937323:-1:exon
so has part: feature:1931479-1932631:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1964826-1964902:-1:exon

position:1964826:-1
position: 1964826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1960090-1960148:-1:exon

position:1960090:-1
position: 1960090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1960148:-1
position: 1960148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1957159-1957467:-1:exon

position:1957159:-1
position: 1957159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1957467:-1
position: 1957467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1956060-1956177:-1:exon

position:1956060:-1
position: 1956060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1956177:-1
position: 1956177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1951348-1951553:-1:exon

position:1951348:-1
position: 1951348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1951553:-1
position: 1951553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1949831-1949976:-1:exon

position:1949831:-1
position: 1949831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1949976:-1
position: 1949976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1949598-1949742:-1:exon

position:1949598:-1
position: 1949598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1949742:-1
position: 1949742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1947191-1947487:-1:exon

position:1947191:-1
position: 1947191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1947487:-1
position: 1947487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1946899-1947016:-1:exon

position:1946899:-1
position: 1946899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1947016:-1
position: 1947016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1944332-1944531:-1:exon

position:1944332:-1
position: 1944332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1944531:-1
position: 1944531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1942177-1942325:-1:exon

position:1942177:-1
position: 1942177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1942325:-1
position: 1942325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1941778-1941937:-1:exon

position:1941778:-1
position: 1941778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1941937:-1
position: 1941937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1941607-1941689:-1:exon

position:1941607:-1
position: 1941607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1941689:-1
position: 1941689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1940721-1940937:-1:exon

position:1940721:-1
position: 1940721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1940937:-1
position: 1940937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1939360-1939542:-1:exon

position:1939360:-1
position: 1939360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1939542:-1
position: 1939542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1938690-1938785:-1:exon

position:1938690:-1
position: 1938690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1938785:-1
position: 1938785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1938010-1938118:-1:exon

position:1938010:-1
position: 1938010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1938118:-1
position: 1938118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1937248-1937323:-1:exon

position:1937248:-1
position: 1937248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1937323:-1
position: 1937323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1931479-1932631:-1:exon

position:1932631:-1
position: 1932631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LEPR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LEPR
product: leptin receptor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032192747.1
SIO_010081: LEPR
subclass of: SO_0000673
so part of: LEPR
location: complement(join(1931479..1932631,1937248..1937323,1938010..1938118,1938690..1938785,1939360..1939542,1940721..1940937,1941607..1941689,1941778..1941937,1942177..1942325,1944332..1944531,1946899..1947016,1947191..1947487,1949598..1949742,1949831..1949976,1951348..1951553,1956060..1956177,1957159..1957223,1960090..1960135))
location: region:1931479-1960135:-1
so has part: feature:1960090-1960135:-1:exon
so has part: feature:1957159-1957223:-1:exon
so has part: feature:1956060-1956177:-1:exon
so has part: feature:1951348-1951553:-1:exon
so has part: feature:1949831-1949976:-1:exon
so has part: feature:1949598-1949742:-1:exon
so has part: feature:1947191-1947487:-1:exon
so has part: feature:1946899-1947016:-1:exon
so has part: feature:1944332-1944531:-1:exon
so has part: feature:1942177-1942325:-1:exon
so has part: feature:1941778-1941937:-1:exon
so has part: feature:1941607-1941689:-1:exon
so has part: feature:1940721-1940937:-1:exon
so has part: feature:1939360-1939542:-1:exon
so has part: feature:1938690-1938785:-1:exon
so has part: feature:1938010-1938118:-1:exon
so has part: feature:1937248-1937323:-1:exon
so has part: feature:1931479-1932631:-1:exon

position:1960135:-1
position: 1960135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1960090-1960135:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1957159-1957223:-1:exon

position:1957223:-1
position: 1957223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1956060-1956177:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1951348-1951553:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1949831-1949976:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1949598-1949742:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1947191-1947487:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1946899-1947016:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1944332-1944531:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1942177-1942325:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1941778-1941937:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1941607-1941689:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1940721-1940937:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1939360-1939542:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1938690-1938785:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1938010-1938118:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1937248-1937323:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1931479-1932631:-1:exon

LEPR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LEPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leptin receptor isoform X1
translation: MYWQIILTTAVLLDFIHVAVAHCMVHQILPRNFTLPCMLLNETILSPFSAGVVESWSGLMREHGAAETNPPLLMNEESFLCCLWSDNNIDCSLYRASMQPRMFIPSEISISASQERDSNWNIECWMKGKLDLLVCSLRFLKLHLRPDLKVNLLYAVSDLPLGDVSTSSLKGAAVAAQCGCSEYGKCECCVPSPRLNYTYIMWLKIVTGVTPLWSPLMAVKPIDIIKPEPPLNLHLEMTEKGEVRICWSDPVLMPYPLQYEVNISGNAGPNGWQVVRVALNTSLAIDNLLLDSSNFAQVRCKNHYGPGFWSDWSTPYNLKLGAEVLYFPSKILTSVGSNVSFHCIYKNKTKNVLSRKIVWWLNLAEEIPESQYTLVNDRVSKVTLFNLKATKPRGNFFYNALYCCHQNRECHHRYAELYVVDVNINIKCETDGYLTKMTCRWSTNPNTLLVGSSLQLRYYRSKIYCPNFPSIPPESEVKECHLQRNHSYECIFQPIFLLSGYTLWIEFKHSLGTLESSPTCVVPADVVKPLPPSDIKAEITRNDGLLNVSWTNPVFTNDDLKFQIQYAEKREELTWELYEVSNLPTRSAMIKVQKLCVEYVVQVRCRALDGLGYWSNWSRSAYAVVRDIKAPLQGPEFWRVIVEDPARRQKNVTLLWKPLMKNHSLCSVSQYIIKHQTSENTTWSEYVDKGTTWLFPWTEHTHTITVLAMNSIGVSSRNFNLTLSQQLSTVNAVQSLIAYPVNSTCVILTWTLSPHTYVITSFVIEWKNLNKEEEMKWVRVPPNTSKYYIYDHFILIEKYHFSLYPVFAGGVGKSRVTDRFTKVPDGYENQNNASLYMVLPIVVSTLILLLGALLISHQRMKKLFWEDVPNPKNCSWAQGVNFQKPETFEHLFIKHPEAMSFEPLLLEPEIVLEDISVTKVLKQEDTQDFLVINSMFTKIQDSEHDSACSSSHFTSSSFSESFHNEQIAGEITRQSDIKYATIISNSRSGGLYEEKKNLRSCFERCFLAEDSSVAGAFSSSSWEVGNQAFLLLPDQPGSRPSKTLSLSLISSEGFSEPSDQDDTFPDGGSPERSLYYLGIAALEKRESDIFLTESSGVMCQFHAADLLRDVGFLRNTPPSLNTFIQSSFNYKAIVPYMPQFQMPAAKVQDATENSS
SIO_010081: LEPR
subclass of: SO_0000673
so part of: LEPR
location: complement(join(1931816..1932631,1937248..1937323,1938010..1938118,1938690..1938785,1939360..1939542,1940721..1940937,1941607..1941689,1941778..1941937,1942177..1942325,1944332..1944531,1946899..1947016,1947191..1947487,1949598..1949742,1949831..1949976,1951348..1951553,1956060..1956177,1957159..1957467,1960090..1960129))
location: region:1931816-1960129:-1
so has part: feature:1960090-1960129:-1:exon
so has part: feature:1957159-1957467:-1:exon
so has part: feature:1956060-1956177:-1:exon
so has part: feature:1951348-1951553:-1:exon
so has part: feature:1949831-1949976:-1:exon
so has part: feature:1949598-1949742:-1:exon
so has part: feature:1947191-1947487:-1:exon
so has part: feature:1946899-1947016:-1:exon
so has part: feature:1944332-1944531:-1:exon
so has part: feature:1942177-1942325:-1:exon
so has part: feature:1941778-1941937:-1:exon
so has part: feature:1941607-1941689:-1:exon
so has part: feature:1940721-1940937:-1:exon
so has part: feature:1939360-1939542:-1:exon
so has part: feature:1938690-1938785:-1:exon
so has part: feature:1938010-1938118:-1:exon
so has part: feature:1937248-1937323:-1:exon
so has part: feature:1931816-1932631:-1:exon

XP_032048637.1
type: Protein
SIO_000068: ncbiprotein

position:1931816:-1
position: 1931816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1960129:-1
position: 1960129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1960090-1960129:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1957159-1957467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1956060-1956177:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1951348-1951553:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1949831-1949976:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1949598-1949742:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1947191-1947487:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1946899-1947016:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1944332-1944531:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1942177-1942325:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1941778-1941937:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1941607-1941689:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1940721-1940937:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1939360-1939542:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1938690-1938785:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1938010-1938118:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1937248-1937323:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1931816-1932631:-1:exon

LEPR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LEPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leptin receptor isoform X2
translation: MQPRMFIPSEISISASQERDSNWNIECWMKGKLDLLVCSLRFLKLHLRPDLKVNLLYAVSDLPLGDVSTSSLKGAAVAAQCGCSEYGKCECCVPSPRLNYTYIMWLKIVTGVTPLWSPLMAVKPIDIIKPEPPLNLHLEMTEKGEVRICWSDPVLMPYPLQYEVNISGNAGPNGWQVVRVALNTSLAIDNLLLDSSNFAQVRCKNHYGPGFWSDWSTPYNLKLGAEVLYFPSKILTSVGSNVSFHCIYKNKTKNVLSRKIVWWLNLAEEIPESQYTLVNDRVSKVTLFNLKATKPRGNFFYNALYCCHQNRECHHRYAELYVVDVNINIKCETDGYLTKMTCRWSTNPNTLLVGSSLQLRYYRSKIYCPNFPSIPPESEVKECHLQRNHSYECIFQPIFLLSGYTLWIEFKHSLGTLESSPTCVVPADVVKPLPPSDIKAEITRNDGLLNVSWTNPVFTNDDLKFQIQYAEKREELTWELYEVSNLPTRSAMIKVQKLCVEYVVQVRCRALDGLGYWSNWSRSAYAVVRDIKAPLQGPEFWRVIVEDPARRQKNVTLLWKPLMKNHSLCSVSQYIIKHQTSENTTWSEYVDKGTTWLFPWTEHTHTITVLAMNSIGVSSRNFNLTLSQQLSTVNAVQSLIAYPVNSTCVILTWTLSPHTYVITSFVIEWKNLNKEEEMKWVRVPPNTSKYYIYDHFILIEKYHFSLYPVFAGGVGKSRVTDRFTKVPDGYENQNNASLYMVLPIVVSTLILLLGALLISHQRMKKLFWEDVPNPKNCSWAQGVNFQKPETFEHLFIKHPEAMSFEPLLLEPEIVLEDISVTKVLKQEDTQDFLVINSMFTKIQDSEHDSACSSSHFTSSSFSESFHNEQIAGEITRQSDIKYATIISNSRSGGLYEEKKNLRSCFERCFLAEDSSVAGAFSSSSWEVGNQAFLLLPDQPGSRPSKTLSLSLISSEGFSEPSDQDDTFPDGGSPERSLYYLGIAALEKRESDIFLTESSGVMCQFHAADLLRDVGFLRNTPPSLNTFIQSSFNYKAIVPYMPQFQMPAAKVQDATENSS
SIO_010081: LEPR
subclass of: SO_0000673
so part of: LEPR
location: complement(join(1931816..1932631,1937248..1937323,1938010..1938118,1938690..1938785,1939360..1939542,1940721..1940937,1941607..1941689,1941778..1941937,1942177..1942325,1944332..1944531,1946899..1947016,1947191..1947487,1949598..1949742,1949831..1949976,1951348..1951553,1956060..1956177,1957159..1957216))
location: region:1931816-1957216:-1
so has part: feature:1957159-1957216:-1:exon
so has part: feature:1956060-1956177:-1:exon
so has part: feature:1951348-1951553:-1:exon
so has part: feature:1949831-1949976:-1:exon
so has part: feature:1949598-1949742:-1:exon
so has part: feature:1947191-1947487:-1:exon
so has part: feature:1946899-1947016:-1:exon
so has part: feature:1944332-1944531:-1:exon
so has part: feature:1942177-1942325:-1:exon
so has part: feature:1941778-1941937:-1:exon
so has part: feature:1941607-1941689:-1:exon
so has part: feature:1940721-1940937:-1:exon
so has part: feature:1939360-1939542:-1:exon
so has part: feature:1938690-1938785:-1:exon
so has part: feature:1938010-1938118:-1:exon
so has part: feature:1937248-1937323:-1:exon
so has part: feature:1931816-1932631:-1:exon

XP_032048638.1
type: Protein
SIO_000068: ncbiprotein

position:1957216:-1
position: 1957216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1957159-1957216:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1956060-1956177:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1951348-1951553:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1949831-1949976:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1949598-1949742:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1947191-1947487:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1946899-1947016:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1944332-1944531:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1942177-1942325:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1941778-1941937:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1941607-1941689:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1940721-1940937:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1939360-1939542:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1938690-1938785:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1938010-1938118:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1937248-1937323:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1931816-1932631:-1:exon

LEPR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LEPR
product: leptin receptor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032192748.1
SIO_010081: LEPR
subclass of: SO_0000673
so part of: LEPR
location: complement(join(1936432..1936645,1937248..1937323,1938010..1938118,1938690..1938785,1939360..1939542,1940721..1940937,1941607..1941689,1941778..1941937,1942177..1942325,1944332..1944531,1946899..1947016,1947191..1947487,1949598..1949742,1949831..1949976,1951348..1951553,1956060..1956177,1957159..1957467,1960090..1960148,1964826..1964902))
location: region:1936432-1964902:-1
so has part: feature:1964826-1964902:-1:exon
so has part: feature:1960090-1960148:-1:exon
so has part: feature:1957159-1957467:-1:exon
so has part: feature:1956060-1956177:-1:exon
so has part: feature:1951348-1951553:-1:exon
so has part: feature:1949831-1949976:-1:exon
so has part: feature:1949598-1949742:-1:exon
so has part: feature:1947191-1947487:-1:exon
so has part: feature:1946899-1947016:-1:exon
so has part: feature:1944332-1944531:-1:exon
so has part: feature:1942177-1942325:-1:exon
so has part: feature:1941778-1941937:-1:exon
so has part: feature:1941607-1941689:-1:exon
so has part: feature:1940721-1940937:-1:exon
so has part: feature:1939360-1939542:-1:exon
so has part: feature:1938690-1938785:-1:exon
so has part: feature:1938010-1938118:-1:exon
so has part: feature:1937248-1937323:-1:exon
so has part: feature:1936432-1936645:-1:exon

position:1936432:-1
position: 1936432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1964826-1964902:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1960090-1960148:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1957159-1957467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1956060-1956177:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1951348-1951553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1949831-1949976:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1949598-1949742:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1947191-1947487:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1946899-1947016:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1944332-1944531:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1942177-1942325:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1941778-1941937:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1941607-1941689:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1940721-1940937:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1939360-1939542:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1938690-1938785:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1938010-1938118:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1937248-1937323:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1936432-1936645:-1:exon

position:1936645:-1
position: 1936645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LEPR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LEPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leptin receptor isoform X3
translation: MYWQIILTTAVLLDFIHVAVAHCMVHQILPRNFTLPCMLLNETILSPFSAGVVESWSGLMREHGAAETNPPLLMNEESFLCCLWSDNNIDCSLYRASMQPRMFIPSEISISASQERDSNWNIECWMKGKLDLLVCSLRFLKLHLRPDLKVNLLYAVSDLPLGDVSTSSLKGAAVAAQCGCSEYGKCECCVPSPRLNYTYIMWLKIVTGVTPLWSPLMAVKPIDIIKPEPPLNLHLEMTEKGEVRICWSDPVLMPYPLQYEVNISGNAGPNGWQVVRVALNTSLAIDNLLLDSSNFAQVRCKNHYGPGFWSDWSTPYNLKLGAEVLYFPSKILTSVGSNVSFHCIYKNKTKNVLSRKIVWWLNLAEEIPESQYTLVNDRVSKVTLFNLKATKPRGNFFYNALYCCHQNRECHHRYAELYVVDVNINIKCETDGYLTKMTCRWSTNPNTLLVGSSLQLRYYRSKIYCPNFPSIPPESEVKECHLQRNHSYECIFQPIFLLSGYTLWIEFKHSLGTLESSPTCVVPADVVKPLPPSDIKAEITRNDGLLNVSWTNPVFTNDDLKFQIQYAEKREELTWELYEVSNLPTRSAMIKVQKLCVEYVVQVRCRALDGLGYWSNWSRSAYAVVRDIKAPLQGPEFWRVIVEDPARRQKNVTLLWKPLMKNHSLCSVSQYIIKHQTSENTTWSEYVDKGTTWLFPWTEHTHTITVLAMNSIGVSSRNFNLTLSQQLSTVNAVQSLIAYPVNSTCVILTWTLSPHTYVITSFVIEWKNLNKEEEMKWVRVPPNTSKYYIYDHFILIEKYHFSLYPVFAGGVGKSRVTDRFTKVPDGYENQNNASLYMVLPIVVSTLILLLGALLISHQRMKKLFWEDVPNPKNCSWAQGVNFQKRMDIL
SIO_010081: LEPR
subclass of: SO_0000673
so part of: LEPR
location: complement(join(1936628..1936645,1937248..1937323,1938010..1938118,1938690..1938785,1939360..1939542,1940721..1940937,1941607..1941689,1941778..1941937,1942177..1942325,1944332..1944531,1946899..1947016,1947191..1947487,1949598..1949742,1949831..1949976,1951348..1951553,1956060..1956177,1957159..1957467,1960090..1960129))
location: region:1936628-1960129:-1
so has part: feature:1960090-1960129:-1:exon
so has part: feature:1957159-1957467:-1:exon
so has part: feature:1956060-1956177:-1:exon
so has part: feature:1951348-1951553:-1:exon
so has part: feature:1949831-1949976:-1:exon
so has part: feature:1949598-1949742:-1:exon
so has part: feature:1947191-1947487:-1:exon
so has part: feature:1946899-1947016:-1:exon
so has part: feature:1944332-1944531:-1:exon
so has part: feature:1942177-1942325:-1:exon
so has part: feature:1941778-1941937:-1:exon
so has part: feature:1941607-1941689:-1:exon
so has part: feature:1940721-1940937:-1:exon
so has part: feature:1939360-1939542:-1:exon
so has part: feature:1938690-1938785:-1:exon
so has part: feature:1938010-1938118:-1:exon
so has part: feature:1937248-1937323:-1:exon
so has part: feature:1936628-1936645:-1:exon

XP_032048639.1
type: Protein
SIO_000068: ncbiprotein

position:1936628:-1
position: 1936628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1960090-1960129:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1957159-1957467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1956060-1956177:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1951348-1951553:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1949831-1949976:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1949598-1949742:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1947191-1947487:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1946899-1947016:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1944332-1944531:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1942177-1942325:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1941778-1941937:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1941607-1941689:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1940721-1940937:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1939360-1939542:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1938690-1938785:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1938010-1938118:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1937248-1937323:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1936628-1936645:-1:exon

LEPROT
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: LEPROT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1983874..1989350)
location: region:1983874-1989350:-1
so has part: feature:1983874-1989350:-1:exon
subclass of: SO_0000010

116491821
type: Gene
SIO_000068: ncbigene

position:1983874:-1
position: 1983874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1989350:-1
position: 1989350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1983874-1989350:-1:exon

LEPROT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: LEPROT
product: leptin receptor overlapping transcript
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032192142.1
SIO_010081: LEPROT
subclass of: SO_0000673
so part of: LEPROT
location: complement(join(1983874..1987134,1988405..1988591,1989099..1989174,1989290..1989350))
location: region:1983874-1989350:-1
so has part: feature:1989290-1989350:-1:exon
so has part: feature:1989099-1989174:-1:exon
so has part: feature:1988405-1988591:-1:exon
so has part: feature:1983874-1987134:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1989290-1989350:-1:exon

position:1989290:-1
position: 1989290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1989099-1989174:-1:exon

position:1989099:-1
position: 1989099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1989174:-1
position: 1989174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1988405-1988591:-1:exon

position:1988405:-1
position: 1988405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1988591:-1
position: 1988591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1983874-1987134:-1:exon

position:1987134:-1
position: 1987134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LEPROT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: LEPROT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leptin receptor gene-related protein
translation: MAGIKALVGLSFSGAIGLTFLMLGCALEYYGVYWPMFVLIFYFICPIPHFIAKRVSDDSDAASSACRELAYFFTTGIVVSAFGFPIILARVEAIKWGACGLVLAGNAVIFLTILGFFLVFGRGDDFSWEQW
SIO_010081: LEPROT
subclass of: SO_0000673
so part of: LEPROT
location: complement(join(1987018..1987134,1988405..1988591,1989099..1989174,1989290..1989305))
location: region:1987018-1989305:-1
so has part: feature:1989290-1989305:-1:exon
so has part: feature:1989099-1989174:-1:exon
so has part: feature:1988405-1988591:-1:exon
so has part: feature:1987018-1987134:-1:exon

XP_032048033.1
type: Protein
SIO_000068: ncbiprotein

position:1987018:-1
position: 1987018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1989305:-1
position: 1989305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1989290-1989305:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1989099-1989174:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1988405-1988591:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1987018-1987134:-1:exon

DNAJC6
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: DNAJC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1990095..2033668)
location: region:1990095-2033668:-1
so has part: feature:1990095-2033668:-1:exon
subclass of: SO_0000010

116491737
type: Gene
SIO_000068: ncbigene

position:1990095:-1
position: 1990095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2033668:-1
position: 2033668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1990095-2033668:-1:exon

DNAJC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: DNAJC6
product: DnaJ heat shock protein family (Hsp40) member C6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032191952.1
SIO_010081: DNAJC6
subclass of: SO_0000673
so part of: DNAJC6
location: complement(join(1990095..1992345,1993220..1993396,1995345..1995490,1995848..1996108,1997629..1997763,1998477..1998545,1999888..2000040,2001135..2001581,2002421..2002501,2002614..2002807,2002985..2003064,2004630..2004747,2005151..2005345,2006507..2006640,2008053..2008175,2011986..2012134,2012241..2012290,2013060..2013210,2033645..2033668))
location: region:1990095-2033668:-1
so has part: feature:2033645-2033668:-1:exon
so has part: feature:2013060-2013210:-1:exon
so has part: feature:2012241-2012290:-1:exon
so has part: feature:2011986-2012134:-1:exon
so has part: feature:2008053-2008175:-1:exon
so has part: feature:2006507-2006640:-1:exon
so has part: feature:2005151-2005345:-1:exon
so has part: feature:2004630-2004747:-1:exon
so has part: feature:2002985-2003064:-1:exon
so has part: feature:2002614-2002807:-1:exon
so has part: feature:2002421-2002501:-1:exon
so has part: feature:2001135-2001581:-1:exon
so has part: feature:1999888-2000040:-1:exon
so has part: feature:1998477-1998545:-1:exon
so has part: feature:1997629-1997763:-1:exon
so has part: feature:1995848-1996108:-1:exon
so has part: feature:1995345-1995490:-1:exon
so has part: feature:1993220-1993396:-1:exon
so has part: feature:1990095-1992345:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2033645-2033668:-1:exon

position:2033645:-1
position: 2033645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2013060-2013210:-1:exon

position:2013060:-1
position: 2013060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2013210:-1
position: 2013210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2012241-2012290:-1:exon

position:2012241:-1
position: 2012241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2012290:-1
position: 2012290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2011986-2012134:-1:exon

position:2011986:-1
position: 2011986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2012134:-1
position: 2012134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2008053-2008175:-1:exon

position:2008053:-1
position: 2008053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2008175:-1
position: 2008175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2006507-2006640:-1:exon

position:2006507:-1
position: 2006507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2006640:-1
position: 2006640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2005151-2005345:-1:exon

position:2005151:-1
position: 2005151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2005345:-1
position: 2005345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2004630-2004747:-1:exon

position:2004630:-1
position: 2004630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2004747:-1
position: 2004747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2002985-2003064:-1:exon

position:2002985:-1
position: 2002985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2003064:-1
position: 2003064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2002614-2002807:-1:exon

position:2002614:-1
position: 2002614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2002807:-1
position: 2002807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2002421-2002501:-1:exon

position:2002421:-1
position: 2002421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2002501:-1
position: 2002501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2001135-2001581:-1:exon

position:2001135:-1
position: 2001135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2001581:-1
position: 2001581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1999888-2000040:-1:exon

position:1999888:-1
position: 1999888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2000040:-1
position: 2000040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1998477-1998545:-1:exon

position:1998477:-1
position: 1998477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1998545:-1
position: 1998545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1997629-1997763:-1:exon

position:1997629:-1
position: 1997629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1997763:-1
position: 1997763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1995848-1996108:-1:exon

position:1995848:-1
position: 1995848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1996108:-1
position: 1996108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1995345-1995490:-1:exon

position:1995345:-1
position: 1995345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1995490:-1
position: 1995490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1993220-1993396:-1:exon

position:1993220:-1
position: 1993220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1993396:-1
position: 1993396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1990095-1992345:-1:exon

position:1992345:-1
position: 1992345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DNAJC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: DNAJC6
product: DnaJ heat shock protein family (Hsp40) member C6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032191951.1
SIO_010081: DNAJC6
subclass of: SO_0000673
so part of: DNAJC6
location: complement(join(1990095..1992345,1993220..1993396,1995345..1995490,1995848..1996108,1997629..1997763,1998477..1998545,1999888..2000040,2001135..2001581,2002421..2002501,2002614..2002807,2002985..2003064,2004630..2004747,2005151..2005345,2006507..2006640,2008053..2008175,2011986..2012134,2012241..2012290,2013060..2013210,2024426..2024618))
location: region:1990095-2024618:-1
so has part: feature:2024426-2024618:-1:exon
so has part: feature:2013060-2013210:-1:exon
so has part: feature:2012241-2012290:-1:exon
so has part: feature:2011986-2012134:-1:exon
so has part: feature:2008053-2008175:-1:exon
so has part: feature:2006507-2006640:-1:exon
so has part: feature:2005151-2005345:-1:exon
so has part: feature:2004630-2004747:-1:exon
so has part: feature:2002985-2003064:-1:exon
so has part: feature:2002614-2002807:-1:exon
so has part: feature:2002421-2002501:-1:exon
so has part: feature:2001135-2001581:-1:exon
so has part: feature:1999888-2000040:-1:exon
so has part: feature:1998477-1998545:-1:exon
so has part: feature:1997629-1997763:-1:exon
so has part: feature:1995848-1996108:-1:exon
so has part: feature:1995345-1995490:-1:exon
so has part: feature:1993220-1993396:-1:exon
so has part: feature:1990095-1992345:-1:exon

position:2024618:-1
position: 2024618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2024426-2024618:-1:exon

position:2024426:-1
position: 2024426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2013060-2013210:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2012241-2012290:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2011986-2012134:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2008053-2008175:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2006507-2006640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2005151-2005345:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2004630-2004747:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2002985-2003064:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2002614-2002807:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2002421-2002501:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2001135-2001581:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1999888-2000040:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1998477-1998545:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1997629-1997763:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1995848-1996108:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1995345-1995490:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1993220-1993396:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1990095-1992345:-1:exon

DNAJC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: DNAJC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative tyrosine-protein phosphatase auxilin isoform X2
translation: MEAAAGPGASSPDMESSYGGGLLDMVKGGAGRLFSNLKDNLKDTLKDTSSKVMQSVASYTKGELDISYITSRIIVMSFPAEGVELGFRNHIEDVRTFLDSRHPDHYTVFNLSPKYYRSAKFHNRVSECSWPVRQAPSLHNLYAVCKNMHNWLQQNPKNVCVIHCMDGRAASAVLVSAMFCFCHLFSNPGPAVQLLNTKRPGIVLWPSHRRYIGYICDLIADKPIIPHCKPLTIKSVTLSPVPCFNKQRNGCRPFCDILSGETRILTTSQEYERMKEYRVQEGKVLIPLGATVHGDVVVSVYHMRSTIGGRLQAKMTNTQIFQIQFHTGFIALGTTTLKFTKPELDACDSPDKYPQLFHVILEIEIQSTDRQTELTPPWENFTTKDINPTILFSSHQEHQDTLALAGKCPTDSPPDNIRNVGQSAFFSSLSWQDQKSDKSSSHPTSEDRAALVHEESEQSDDELLSLSSQHSNASGDKPHGTPKHSKKQQEPPAPPPPEDVDLLGLDGSPMSKSFPSQPAAAPSNSDLLNDLFGVGGSGSQSQSGQPAAEEVFHVGGPGSVQSTPRRSAASASPSPSPRAGEATAFDPFGSSPKQAGPDLLGSFLGSANVPGDPFLQATRSPSPTVHSDPFHMASSTPTVSIQPDVSGGWDWPSKPGGLGMGSRSAATSPTGSLHSTPTHQPKPQTLDPFADLGTLGASLAGGPSFASKPTTPTGMGGGFPPSPQKPSPQPMGGSSWQQGAGYGWQQAQPKAQPSMPHASPQNKPNYNVSFSAMPGAQSERGKGPANADSKPKVSADFEDLLSGQGFNAHKDKKGPKTIAEMRKEEMAKEMDPEKLKVLEWIEGKERNIRALLSTMHTVLWAGETKWKPVSMADLVTPEQVKKVYRRAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY
SIO_010081: DNAJC6
subclass of: SO_0000673
so part of: DNAJC6
location: complement(join(1992244..1992345,1993220..1993396,1995345..1995490,1995848..1996108,1997629..1997763,1998477..1998545,1999888..2000040,2001135..2001581,2002421..2002501,2002614..2002807,2002985..2003064,2004630..2004747,2005151..2005345,2006507..2006640,2008053..2008175,2011986..2012134,2012241..2012290,2013060..2013210,2033645..2033666))
location: region:1992244-2033666:-1
so has part: feature:2033645-2033666:-1:exon
so has part: feature:2013060-2013210:-1:exon
so has part: feature:2012241-2012290:-1:exon
so has part: feature:2011986-2012134:-1:exon
so has part: feature:2008053-2008175:-1:exon
so has part: feature:2006507-2006640:-1:exon
so has part: feature:2005151-2005345:-1:exon
so has part: feature:2004630-2004747:-1:exon
so has part: feature:2002985-2003064:-1:exon
so has part: feature:2002614-2002807:-1:exon
so has part: feature:2002421-2002501:-1:exon
so has part: feature:2001135-2001581:-1:exon
so has part: feature:1999888-2000040:-1:exon
so has part: feature:1998477-1998545:-1:exon
so has part: feature:1997629-1997763:-1:exon
so has part: feature:1995848-1996108:-1:exon
so has part: feature:1995345-1995490:-1:exon
so has part: feature:1993220-1993396:-1:exon
so has part: feature:1992244-1992345:-1:exon

XP_032047843.1
type: Protein
SIO_000068: ncbiprotein

position:1992244:-1
position: 1992244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2033666:-1
position: 2033666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2033645-2033666:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2013060-2013210:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2012241-2012290:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2011986-2012134:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2008053-2008175:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2006507-2006640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2005151-2005345:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2004630-2004747:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2002985-2003064:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2002614-2002807:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2002421-2002501:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2001135-2001581:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1999888-2000040:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1998477-1998545:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1997629-1997763:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1995848-1996108:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1995345-1995490:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1993220-1993396:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1992244-1992345:-1:exon

DNAJC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: DNAJC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative tyrosine-protein phosphatase auxilin isoform X1
translation: MSLLGGYRRKPGGEGYEALQLVEGGGGGGAGEPGAGGRSPSRQPPQQQQQQQQQRGADGTMDSSGASSPDMESSYGGGLLDMVKGGAGRLFSNLKDNLKDTLKDTSSKVMQSVASYTKGELDISYITSRIIVMSFPAEGVELGFRNHIEDVRTFLDSRHPDHYTVFNLSPKYYRSAKFHNRVSECSWPVRQAPSLHNLYAVCKNMHNWLQQNPKNVCVIHCMDGRAASAVLVSAMFCFCHLFSNPGPAVQLLNTKRPGIVLWPSHRRYIGYICDLIADKPIIPHCKPLTIKSVTLSPVPCFNKQRNGCRPFCDILSGETRILTTSQEYERMKEYRVQEGKVLIPLGATVHGDVVVSVYHMRSTIGGRLQAKMTNTQIFQIQFHTGFIALGTTTLKFTKPELDACDSPDKYPQLFHVILEIEIQSTDRQTELTPPWENFTTKDINPTILFSSHQEHQDTLALAGKCPTDSPPDNIRNVGQSAFFSSLSWQDQKSDKSSSHPTSEDRAALVHEESEQSDDELLSLSSQHSNASGDKPHGTPKHSKKQQEPPAPPPPEDVDLLGLDGSPMSKSFPSQPAAAPSNSDLLNDLFGVGGSGSQSQSGQPAAEEVFHVGGPGSVQSTPRRSAASASPSPSPRAGEATAFDPFGSSPKQAGPDLLGSFLGSANVPGDPFLQATRSPSPTVHSDPFHMASSTPTVSIQPDVSGGWDWPSKPGGLGMGSRSAATSPTGSLHSTPTHQPKPQTLDPFADLGTLGASLAGGPSFASKPTTPTGMGGGFPPSPQKPSPQPMGGSSWQQGAGYGWQQAQPKAQPSMPHASPQNKPNYNVSFSAMPGAQSERGKGPANADSKPKVSADFEDLLSGQGFNAHKDKKGPKTIAEMRKEEMAKEMDPEKLKVLEWIEGKERNIRALLSTMHTVLWAGETKWKPVSMADLVTPEQVKKVYRRAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY
SIO_010081: DNAJC6
subclass of: SO_0000673
so part of: DNAJC6
location: complement(join(1992244..1992345,1993220..1993396,1995345..1995490,1995848..1996108,1997629..1997763,1998477..1998545,1999888..2000040,2001135..2001581,2002421..2002501,2002614..2002807,2002985..2003064,2004630..2004747,2005151..2005345,2006507..2006640,2008053..2008175,2011986..2012134,2012241..2012290,2013060..2013210,2024426..2024618))
location: region:1992244-2024618:-1
so has part: feature:2024426-2024618:-1:exon
so has part: feature:2013060-2013210:-1:exon
so has part: feature:2012241-2012290:-1:exon
so has part: feature:2011986-2012134:-1:exon
so has part: feature:2008053-2008175:-1:exon
so has part: feature:2006507-2006640:-1:exon
so has part: feature:2005151-2005345:-1:exon
so has part: feature:2004630-2004747:-1:exon
so has part: feature:2002985-2003064:-1:exon
so has part: feature:2002614-2002807:-1:exon
so has part: feature:2002421-2002501:-1:exon
so has part: feature:2001135-2001581:-1:exon
so has part: feature:1999888-2000040:-1:exon
so has part: feature:1998477-1998545:-1:exon
so has part: feature:1997629-1997763:-1:exon
so has part: feature:1995848-1996108:-1:exon
so has part: feature:1995345-1995490:-1:exon
so has part: feature:1993220-1993396:-1:exon
so has part: feature:1992244-1992345:-1:exon

XP_032047842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2024426-2024618:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2013060-2013210:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2012241-2012290:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2011986-2012134:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2008053-2008175:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2006507-2006640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2005151-2005345:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2004630-2004747:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2002985-2003064:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2002614-2002807:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2002421-2002501:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2001135-2001581:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1999888-2000040:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1998477-1998545:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1997629-1997763:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1995848-1996108:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1995345-1995490:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1993220-1993396:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1992244-1992345:-1:exon

AK4
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: AK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2034914..2044219)
location: region:2034914-2044219:-1
so has part: feature:2034914-2044219:-1:exon
subclass of: SO_0000010

116492194
type: Gene
SIO_000068: ncbigene

position:2034914:-1
position: 2034914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2044219:-1
position: 2044219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2034914-2044219:-1:exon

AK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: AK4
product: adenylate kinase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032192750.1
SIO_010081: AK4
subclass of: SO_0000673
so part of: AK4
location: complement(join(2034914..2037148,2037764..2037882,2038225..2038397,2039525..2039644,2043859..2044219))
location: region:2034914-2044219:-1
so has part: feature:2043859-2044219:-1:exon
so has part: feature:2039525-2039644:-1:exon
so has part: feature:2038225-2038397:-1:exon
so has part: feature:2037764-2037882:-1:exon
so has part: feature:2034914-2037148:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2043859-2044219:-1:exon

position:2043859:-1
position: 2043859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2039525-2039644:-1:exon

position:2039525:-1
position: 2039525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2039644:-1
position: 2039644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2038225-2038397:-1:exon

position:2038225:-1
position: 2038225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2038397:-1
position: 2038397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2037764-2037882:-1:exon

position:2037764:-1
position: 2037764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2037882:-1
position: 2037882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2034914-2037148:-1:exon

position:2037148:-1
position: 2037148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: AK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenylate kinase 4, mitochondrial
translation: MASKVLRAVVLGPPGSGKGTVCERIARSFGLQHLSSGQFLRESLGRGGEVGVLAKQYLERGLLVPDHVITRVMMTELEKRRGEHWLLDGFPRTLGQAEALDRICELDLVISLNIPFETLKDRLSARWIHPASGRVYNMEFNPPHVHGIDDLTGEPLVQREDDKPEAVAARLRKYKDAAKPVIELYKSRGILHSFSGTETNKIWPYVYALLSNKIPPLHSEEEN
SIO_010081: AK4
subclass of: SO_0000673
so part of: AK4
location: complement(join(2037034..2037148,2037764..2037882,2038225..2038397,2039525..2039644,2043859..2044003))
location: region:2037034-2044003:-1
so has part: feature:2043859-2044003:-1:exon
so has part: feature:2039525-2039644:-1:exon
so has part: feature:2038225-2038397:-1:exon
so has part: feature:2037764-2037882:-1:exon
so has part: feature:2037034-2037148:-1:exon

XP_032048641.1
type: Protein
SIO_000068: ncbiprotein

position:2037034:-1
position: 2037034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2044003:-1
position: 2044003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2043859-2044003:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2039525-2039644:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2038225-2038397:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2037764-2037882:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2037034-2037148:-1:exon

JAK1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: JAK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2058329..2112784
location: region:2058329-2112784:1
so has part: feature:2058329-2112784:1:exon
subclass of: SO_0000010

116491721
type: Gene
SIO_000068: ncbigene

position:2058329:1
position: 2058329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2112784:1
position: 2112784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2058329-2112784:1:exon

JAK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: JAK1
product: Janus kinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032191915.1
SIO_010081: JAK1
subclass of: SO_0000673
so part of: JAK1
location: join(2058329..2058461,2083397..2083476,2084497..2084695,2086985..2087108,2092070..2092223,2093504..2093667,2094216..2094558,2096076..2096249,2097024..2097181,2097867..2097990,2098666..2098852,2100838..2100944,2102214..2102360,2103117..2103204,2103753..2103880,2104388..2104523,2104956..2105107,2105908..2106058,2107155..2107249,2107732..2107924,2108543..2108667,2109463..2109635,2110110..2110227,2110581..2110691,2111663..2112784)
location: region:2058329-2112784:1
so has part: feature:2058329-2058461:1:exon
so has part: feature:2083397-2083476:1:exon
so has part: feature:2084497-2084695:1:exon
so has part: feature:2086985-2087108:1:exon
so has part: feature:2092070-2092223:1:exon
so has part: feature:2093504-2093667:1:exon
so has part: feature:2094216-2094558:1:exon
so has part: feature:2096076-2096249:1:exon
so has part: feature:2097024-2097181:1:exon
so has part: feature:2097867-2097990:1:exon
so has part: feature:2098666-2098852:1:exon
so has part: feature:2100838-2100944:1:exon
so has part: feature:2102214-2102360:1:exon
so has part: feature:2103117-2103204:1:exon
so has part: feature:2103753-2103880:1:exon
so has part: feature:2104388-2104523:1:exon
so has part: feature:2104956-2105107:1:exon
so has part: feature:2105908-2106058:1:exon
so has part: feature:2107155-2107249:1:exon
so has part: feature:2107732-2107924:1:exon
so has part: feature:2108543-2108667:1:exon
so has part: feature:2109463-2109635:1:exon
so has part: feature:2110110-2110227:1:exon
so has part: feature:2110581-2110691:1:exon
so has part: feature:2111663-2112784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2058329-2058461:1:exon

position:2058461:1
position: 2058461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2083397-2083476:1:exon

position:2083397:1
position: 2083397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2083476:1
position: 2083476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2084497-2084695:1:exon

position:2084497:1
position: 2084497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2084695:1
position: 2084695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2086985-2087108:1:exon

position:2086985:1
position: 2086985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2087108:1
position: 2087108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2092070-2092223:1:exon

position:2092070:1
position: 2092070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2092223:1
position: 2092223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2093504-2093667:1:exon

position:2093504:1
position: 2093504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2093667:1
position: 2093667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2094216-2094558:1:exon

position:2094216:1
position: 2094216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2094558:1
position: 2094558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2096076-2096249:1:exon

position:2096076:1
position: 2096076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2096249:1
position: 2096249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2097024-2097181:1:exon

position:2097024:1
position: 2097024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2097181:1
position: 2097181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2097867-2097990:1:exon

position:2097867:1
position: 2097867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2097990:1
position: 2097990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2098666-2098852:1:exon

position:2098666:1
position: 2098666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2098852:1
position: 2098852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2100838-2100944:1:exon

position:2100838:1
position: 2100838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2100944:1
position: 2100944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2102214-2102360:1:exon

position:2102214:1
position: 2102214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2102360:1
position: 2102360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2103117-2103204:1:exon

position:2103117:1
position: 2103117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2103204:1
position: 2103204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2103753-2103880:1:exon

position:2103753:1
position: 2103753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2103880:1
position: 2103880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2104388-2104523:1:exon

position:2104388:1
position: 2104388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2104523:1
position: 2104523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2104956-2105107:1:exon

position:2104956:1
position: 2104956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2105107:1
position: 2105107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2105908-2106058:1:exon

position:2105908:1
position: 2105908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2106058:1
position: 2106058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2107155-2107249:1:exon

position:2107155:1
position: 2107155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2107249:1
position: 2107249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2107732-2107924:1:exon

position:2107732:1
position: 2107732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2107924:1
position: 2107924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2108543-2108667:1:exon

position:2108543:1
position: 2108543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2108667:1
position: 2108667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2109463-2109635:1:exon

position:2109463:1
position: 2109463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2109635:1
position: 2109635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2110110-2110227:1:exon

position:2110110:1
position: 2110110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2110227:1
position: 2110227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2110581-2110691:1:exon

position:2110581:1
position: 2110581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2110691:1
position: 2110691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2111663-2112784:1:exon

position:2111663:1
position: 2111663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

JAK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: JAK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase JAK1
translation: MQYLNVKEDCKAMAFCAKMRSTKKSEVNLEAQHQGLEILFYLQDEDPIRYTSGEFTSEELCIEAARKCSISPLCHNLFALFDENKKLWYAPNQVFKIDEKTSHRLHYRMRYYFTNWHGTSENEPSVWRHSPKKSKNSYEKKHVPEGTPILDANSLEYIFAQGQYDLVKGLAPIRDPKNDQEVHEIENECLGMAVLAISHYAINKKLKLPELPKDISYKHYIPETLNKTIRQRNFLTRIRINNVFKHFLKEFNNKTICDSSVSPRDLKVKYLSTMETLTKYYGAEIFETSSLLISSENEINRFNCGDNEILPLYEVIVTGNNGIQWRLKPNSVQTEKEKKKKSDGKTKKEEEKHKIRDLWNNFSYFPEITHIVIKESTVSINKQDNKRMEIKLSSHDEALSFASLIDGYFRLTADAHHYLCTDVAPPLIEHNIKNGCHGPICTEYAINKLRQEGNEAGMYVLRWSCTNFNHILMTVTCFEGSEMINSSIQYKNFQIEVKKGGYFLHGSNKSFASLKELMDHLKGQILRTDNISFTLKRCCQPKPREISNLLVATKKAQEWQPVYHLGQLSFHRILKEEITQGEHLGRGTRTQIYSGILNYKDDENEGYQNEKEIKVLLKVLDPSHRDISLAFFETASMMRQVSHKHIVLLHGVCVRDVEDVMVEEFVEFGPLDLFMHRKSELLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDTEYGPFIKLSDPGIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYEGHFVLATPSCKELADLMKQCMNYDPHQRPFFRAIMRDINKLEEQNPDIVSEKKPVTEVDPTLFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQLLKYAVQICKGMHYLGSCHYVHRDLAARNVLVESENRVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLLQSKFYTASDVWSFGVTLYELLTYCDSESSPMAEFLKMIGPTQGQMTVARLVRVLQEEKRLPRPPNCPEEVDQLMRKCWIFKHDKRTTFHNLIQGFETIMSKI
SIO_010081: JAK1
subclass of: SO_0000673
so part of: JAK1
location: join(2083471..2083476,2084497..2084695,2086985..2087108,2092070..2092223,2093504..2093667,2094216..2094558,2096076..2096249,2097024..2097181,2097867..2097990,2098666..2098852,2100838..2100944,2102214..2102360,2103117..2103204,2103753..2103880,2104388..2104523,2104956..2105107,2105908..2106058,2107155..2107249,2107732..2107924,2108543..2108667,2109463..2109635,2110110..2110227,2110581..2110691,2111663..2111764)
location: region:2083471-2111764:1
so has part: feature:2083471-2083476:1:exon
so has part: feature:2084497-2084695:1:exon
so has part: feature:2086985-2087108:1:exon
so has part: feature:2092070-2092223:1:exon
so has part: feature:2093504-2093667:1:exon
so has part: feature:2094216-2094558:1:exon
so has part: feature:2096076-2096249:1:exon
so has part: feature:2097024-2097181:1:exon
so has part: feature:2097867-2097990:1:exon
so has part: feature:2098666-2098852:1:exon
so has part: feature:2100838-2100944:1:exon
so has part: feature:2102214-2102360:1:exon
so has part: feature:2103117-2103204:1:exon
so has part: feature:2103753-2103880:1:exon
so has part: feature:2104388-2104523:1:exon
so has part: feature:2104956-2105107:1:exon
so has part: feature:2105908-2106058:1:exon
so has part: feature:2107155-2107249:1:exon
so has part: feature:2107732-2107924:1:exon
so has part: feature:2108543-2108667:1:exon
so has part: feature:2109463-2109635:1:exon
so has part: feature:2110110-2110227:1:exon
so has part: feature:2110581-2110691:1:exon
so has part: feature:2111663-2111764:1:exon

XP_032047806.1
type: Protein
SIO_000068: ncbiprotein

position:2083471:1
position: 2083471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2111764:1
position: 2111764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2083471-2083476:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2084497-2084695:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2086985-2087108:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2092070-2092223:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2093504-2093667:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2094216-2094558:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2096076-2096249:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2097024-2097181:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2097867-2097990:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2098666-2098852:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2100838-2100944:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2102214-2102360:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2103117-2103204:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2103753-2103880:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2104388-2104523:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2104956-2105107:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2105908-2106058:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2107155-2107249:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2107732-2107924:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2108543-2108667:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2109463-2109635:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2110110-2110227:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2110581-2110691:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2111663-2111764:1:exon

RAVER2
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: RAVER2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2113561..2151945)
location: region:2113561-2151945:-1
so has part: feature:2113561-2151945:-1:exon
subclass of: SO_0000010

116491859
type: Gene
SIO_000068: ncbigene

position:2113561:-1
position: 2113561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2151945:-1
position: 2151945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2113561-2151945:-1:exon

RAVER2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: RAVER2
product: ribonucleoprotein, PTB binding 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032192218.1
SIO_010081: RAVER2
subclass of: SO_0000673
so part of: RAVER2
location: complement(join(2113561..2115569,2120953..2121098,2121460..2121571,2123782..2124011,2125154..2125265,2125467..2125571,2129041..2129123,2130093..2130219,2131488..2131679,2133800..2134269,2140408..2140474,2148697..2148920,2151903..2151945))
location: region:2113561-2151945:-1
so has part: feature:2151903-2151945:-1:exon
so has part: feature:2148697-2148920:-1:exon
so has part: feature:2140408-2140474:-1:exon
so has part: feature:2133800-2134269:-1:exon
so has part: feature:2131488-2131679:-1:exon
so has part: feature:2130093-2130219:-1:exon
so has part: feature:2129041-2129123:-1:exon
so has part: feature:2125467-2125571:-1:exon
so has part: feature:2125154-2125265:-1:exon
so has part: feature:2123782-2124011:-1:exon
so has part: feature:2121460-2121571:-1:exon
so has part: feature:2120953-2121098:-1:exon
so has part: feature:2113561-2115569:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2151903-2151945:-1:exon

position:2151903:-1
position: 2151903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2148697-2148920:-1:exon

position:2148697:-1
position: 2148697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2148920:-1
position: 2148920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2140408-2140474:-1:exon

position:2140408:-1
position: 2140408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2140474:-1
position: 2140474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2133800-2134269:-1:exon

position:2133800:-1
position: 2133800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2134269:-1
position: 2134269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2131488-2131679:-1:exon

position:2131488:-1
position: 2131488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2131679:-1
position: 2131679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2130093-2130219:-1:exon

position:2130093:-1
position: 2130093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2130219:-1
position: 2130219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2129041-2129123:-1:exon

position:2129041:-1
position: 2129041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2129123:-1
position: 2129123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2125467-2125571:-1:exon

position:2125467:-1
position: 2125467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2125571:-1
position: 2125571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2125154-2125265:-1:exon

position:2125154:-1
position: 2125154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2125265:-1
position: 2125265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2123782-2124011:-1:exon

position:2123782:-1
position: 2123782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2124011:-1
position: 2124011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2121460-2121571:-1:exon

position:2121460:-1
position: 2121460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2121571:-1
position: 2121571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2120953-2121098:-1:exon

position:2120953:-1
position: 2120953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2121098:-1
position: 2121098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2113561-2115569:-1:exon

position:2115569:-1
position: 2115569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAVER2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: RAVER2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribonucleoprotein PTB-binding 2
translation: MADLKRQQPKSTLDTRAGRRCKMAAAAERGAELPAEEAPPPLLPPLPRGARPPPPSPEEVARRLASTRRELSNRRKILLRNLPAESSSQEIHDLFKDYEIKYCYVDRNKRTAFVTLLNGEQAQNAIRKFHQYSLRGKEISVQLQPTDALLCITNLPISFTLEEFEELVRAYGNVERCFLVYNEVTGHSKGYGFVEYMKKDSAAKARLELLGKQLDESTLFAQWMDVNQLTTSLIHSKCLCVDKLQKDYTDSKELMQAFSLKYKPVFCQFAQDEDSCIGDFAVVEYETAEQAEKVQEVTDGMIIKGKRIQVSYCAPGAPGRSTLAALIAAQRMMRNNRKGLLPEPNAVQIMKSFNNPAMLQILLQPQLRGHAVKPVLGTTAGFPHLINTAVGPPFLQLNKVHQSSVLGSASNLLLQSPAHLPLPQQQLMKIENVQANSKPGLLGEPPTMLLQTVLGIGVMPSVTSGMGTRGEALKSAAAAGMGMLPFFPNQHIVGQALPGQNNAPEKQSTTEAVVSGSQPYHQTLTNLPAGALRAGHAKQQNQLKSTDTSLGTPLKKQTSLLGEPPKEIRLSTNPYLNLASVLPGICLPAIASKASNPPQQTGLPNTIVDAAVSQGATSQHGMEGYFNYSQQHGEYTQVAPSRSEKRGSSYLISSPEPGPVEYIGQQAQGSAMRYTESSLKKKRVY
SIO_010081: RAVER2
subclass of: SO_0000673
so part of: RAVER2
location: complement(join(2115423..2115569,2120953..2121098,2121460..2121571,2123782..2124011,2125154..2125265,2125467..2125571,2129041..2129123,2130093..2130219,2131488..2131679,2133800..2134269,2140408..2140474,2148697..2148920,2151903..2151945))
location: region:2115423-2151945:-1
so has part: feature:2151903-2151945:-1:exon
so has part: feature:2148697-2148920:-1:exon
so has part: feature:2140408-2140474:-1:exon
so has part: feature:2133800-2134269:-1:exon
so has part: feature:2131488-2131679:-1:exon
so has part: feature:2130093-2130219:-1:exon
so has part: feature:2129041-2129123:-1:exon
so has part: feature:2125467-2125571:-1:exon
so has part: feature:2125154-2125265:-1:exon
so has part: feature:2123782-2124011:-1:exon
so has part: feature:2121460-2121571:-1:exon
so has part: feature:2120953-2121098:-1:exon
so has part: feature:2115423-2115569:-1:exon

XP_032048109.1
type: Protein
SIO_000068: ncbiprotein

position:2115423:-1
position: 2115423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2151903-2151945:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2148697-2148920:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2140408-2140474:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2133800-2134269:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2131488-2131679:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2130093-2130219:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2129041-2129123:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2125467-2125571:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2125154-2125265:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2123782-2124011:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2121460-2121571:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2120953-2121098:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2115423-2115569:-1:exon

CACHD1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: CACHD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2160512..2254935)
location: region:2160512-2254935:-1
so has part: feature:2160512-2254935:-1:exon
subclass of: SO_0000010

116491860
type: Gene
SIO_000068: ncbigene

position:2160512:-1
position: 2160512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2254935:-1
position: 2254935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2160512-2254935:-1:exon

CACHD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: CACHD1
product: cache domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032192219.1
SIO_010081: CACHD1
subclass of: SO_0000673
so part of: CACHD1
location: complement(join(2160512..2162049,2164693..2164794,2165705..2165782,2166736..2166897,2167120..2167271,2168240..2168356,2168564..2168650,2169011..2169171,2170421..2170537,2170659..2170758,2172710..2172832,2176313..2176423,2178137..2178318,2178953..2179095,2181566..2181734,2183023..2183140,2183901..2184024,2184577..2184726,2186961..2187194,2188203..2188352,2191373..2191589,2193193..2193337,2195521..2195647,2203107..2203213,2213068..2213216,2222875..2222937,2254344..2254501,2254896..2254935))
location: region:2160512-2254935:-1
so has part: feature:2254896-2254935:-1:exon
so has part: feature:2254344-2254501:-1:exon
so has part: feature:2222875-2222937:-1:exon
so has part: feature:2213068-2213216:-1:exon
so has part: feature:2203107-2203213:-1:exon
so has part: feature:2195521-2195647:-1:exon
so has part: feature:2193193-2193337:-1:exon
so has part: feature:2191373-2191589:-1:exon
so has part: feature:2188203-2188352:-1:exon
so has part: feature:2186961-2187194:-1:exon
so has part: feature:2184577-2184726:-1:exon
so has part: feature:2183901-2184024:-1:exon
so has part: feature:2183023-2183140:-1:exon
so has part: feature:2181566-2181734:-1:exon
so has part: feature:2178953-2179095:-1:exon
so has part: feature:2178137-2178318:-1:exon
so has part: feature:2176313-2176423:-1:exon
so has part: feature:2172710-2172832:-1:exon
so has part: feature:2170659-2170758:-1:exon
so has part: feature:2170421-2170537:-1:exon
so has part: feature:2169011-2169171:-1:exon
so has part: feature:2168564-2168650:-1:exon
so has part: feature:2168240-2168356:-1:exon
so has part: feature:2167120-2167271:-1:exon
so has part: feature:2166736-2166897:-1:exon
so has part: feature:2165705-2165782:-1:exon
so has part: feature:2164693-2164794:-1:exon
so has part: feature:2160512-2162049:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2254896-2254935:-1:exon

position:2254896:-1
position: 2254896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2254344-2254501:-1:exon

position:2254344:-1
position: 2254344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2254501:-1
position: 2254501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2222875-2222937:-1:exon

position:2222875:-1
position: 2222875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2222937:-1
position: 2222937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2213068-2213216:-1:exon

position:2213068:-1
position: 2213068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2213216:-1
position: 2213216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2203107-2203213:-1:exon

position:2203107:-1
position: 2203107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2203213:-1
position: 2203213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2195521-2195647:-1:exon

position:2195521:-1
position: 2195521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2195647:-1
position: 2195647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2193193-2193337:-1:exon

position:2193193:-1
position: 2193193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2193337:-1
position: 2193337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2191373-2191589:-1:exon

position:2191373:-1
position: 2191373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2191589:-1
position: 2191589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2188203-2188352:-1:exon

position:2188203:-1
position: 2188203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2188352:-1
position: 2188352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2186961-2187194:-1:exon

position:2186961:-1
position: 2186961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2187194:-1
position: 2187194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2184577-2184726:-1:exon

position:2184577:-1
position: 2184577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2184726:-1
position: 2184726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2183901-2184024:-1:exon

position:2183901:-1
position: 2183901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2184024:-1
position: 2184024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2183023-2183140:-1:exon

position:2183023:-1
position: 2183023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2183140:-1
position: 2183140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2181566-2181734:-1:exon

position:2181566:-1
position: 2181566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2181734:-1
position: 2181734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2178953-2179095:-1:exon

position:2178953:-1
position: 2178953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2179095:-1
position: 2179095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2178137-2178318:-1:exon

position:2178137:-1
position: 2178137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2178318:-1
position: 2178318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2176313-2176423:-1:exon

position:2176313:-1
position: 2176313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2176423:-1
position: 2176423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2172710-2172832:-1:exon

position:2172710:-1
position: 2172710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2172832:-1
position: 2172832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2170659-2170758:-1:exon

position:2170659:-1
position: 2170659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2170758:-1
position: 2170758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2170421-2170537:-1:exon

position:2170421:-1
position: 2170421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2170537:-1
position: 2170537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2169011-2169171:-1:exon

position:2169011:-1
position: 2169011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2169171:-1
position: 2169171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2168564-2168650:-1:exon

position:2168564:-1
position: 2168564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2168650:-1
position: 2168650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2168240-2168356:-1:exon

position:2168240:-1
position: 2168240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2168356:-1
position: 2168356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2167120-2167271:-1:exon

position:2167120:-1
position: 2167120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2167271:-1
position: 2167271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2166736-2166897:-1:exon

position:2166736:-1
position: 2166736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2166897:-1
position: 2166897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2165705-2165782:-1:exon

position:2165705:-1
position: 2165705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2165782:-1
position: 2165782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2164693-2164794:-1:exon

position:2164693:-1
position: 2164693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2164794:-1
position: 2164794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2160512-2162049:-1:exon

position:2162049:-1
position: 2162049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CACHD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: CACHD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: VWFA and cache domain-containing protein 1
translation: MTKKPPRELANSPAARGRGPLGLVCLALLCGLGAAEAEFAILEEAQVVAAQMRKLAAEELGVVTMQRIFNSFVYTEKISNGESEVQQLAKKIREKFNRYLDVVNRNKQVVEASYTAHLTSPLTAIQDCCTIPPSMMEFDGNFNTNVSRTISCDRLSTTVNSRAFNPGRDLNSVLADNLKSNPGIKWQYFSSEEGIFTVFPAHKFRCKGSYEHRSRPVYVSTVRPQSKHIVVIVDHGASVTETQLQIAKDAAQVILSSIDEHDKISVLTVADTVRTCSLDQCYKTFLSPATSETKRKMSTFVSSIKSSDSPTQHAVGFQKAFQLIRNTNNGTKLQGNTDMVIIYLSAGITSKDSSEDDKKATLRVINEENSFLNNSVMILTYALMNEGVTGLKELAFLRDLAEQNSVKYGVPDRTALPVIKGSMMVLNQLSNLETTVGRFYTNLPNRMIDEAVFSLPFSDEMGDGLIMTVSKPCYFGNLLLGIVGVDVNLAYILEDVTYYQDSLGSYTFLIDNKGYTLMHPSLTRPYLLSEPPLHTDIIHYENIPKFELVRQNILSIPLGSQIITVPVNSSLSWHVNKLREIGKEAYNVSYAWKMVQDTSFILCVVVIQPEIPVKQLKNLNTVPSSKLLYHRLDLLGQPNACLHFKQLATLESPTVMLSAGSFSSPYEHLSQPETKRMVEHYTAYLSDNTRLIANPGLKFSVRNEVMATSHVTDEWMTQMEMSSLNSYIVRRYIATPNGVLRIYPGSLMDKAFDPTRRQWYLHAVANPGLITFTGPYLDVGGAGYVVTISHTVHSSSAQMSSGHSVAVMGIDFTLRYFYKVLMDLLPVCNQDGGNKIRCFIMEDRGYLVAHPTLIDPKGHAPVEQQHITHKEPLVANDILNHPNFVKKNLCNSFSDRTVQRFYKFNTSLVGDLTNLVHGSHCSKYRLTRIPGTNAFVGIVNETCDSLAFCACSMVDRLCLNCHRMEQNECECPCECPLEVNECTGNLTNAESRNPSCEVHQEPMTFTAIDPSLQDALPQCINTQCNQRTESGDCFGVLDCEWCMVDSDGKTHLDKSYCAPQKECFGGIVGAKSPYVDDLGAIGDEVITLNMIKSAPVGPVAGGIMGCIMVLVLAVYAYRHQIHRRSHQHMSPLAAQEMSVRMSNLENDRDERDDDSHEDRGIISNTRFIAAVIERHAHSPERRRRYWGRSGTESDHGYSTMSPQEDSENPPCNNDPLSAGVDVGNHDEDLDLDTPPQTAALLSHKFHHYRLHHPTLHHSHHLQAAVTVHTVDAEC
SIO_010081: CACHD1
subclass of: SO_0000673
so part of: CACHD1
location: complement(join(2161811..2162049,2164693..2164794,2165705..2165782,2166736..2166897,2167120..2167271,2168240..2168356,2168564..2168650,2169011..2169171,2170421..2170537,2170659..2170758,2172710..2172832,2176313..2176423,2178137..2178318,2178953..2179095,2181566..2181734,2183023..2183140,2183901..2184024,2184577..2184726,2186961..2187194,2188203..2188352,2191373..2191589,2193193..2193337,2195521..2195647,2203107..2203213,2213068..2213216,2222875..2222937,2254344..2254501,2254896..2254935))
location: region:2161811-2254935:-1
so has part: feature:2254896-2254935:-1:exon
so has part: feature:2254344-2254501:-1:exon
so has part: feature:2222875-2222937:-1:exon
so has part: feature:2213068-2213216:-1:exon
so has part: feature:2203107-2203213:-1:exon
so has part: feature:2195521-2195647:-1:exon
so has part: feature:2193193-2193337:-1:exon
so has part: feature:2191373-2191589:-1:exon
so has part: feature:2188203-2188352:-1:exon
so has part: feature:2186961-2187194:-1:exon
so has part: feature:2184577-2184726:-1:exon
so has part: feature:2183901-2184024:-1:exon
so has part: feature:2183023-2183140:-1:exon
so has part: feature:2181566-2181734:-1:exon
so has part: feature:2178953-2179095:-1:exon
so has part: feature:2178137-2178318:-1:exon
so has part: feature:2176313-2176423:-1:exon
so has part: feature:2172710-2172832:-1:exon
so has part: feature:2170659-2170758:-1:exon
so has part: feature:2170421-2170537:-1:exon
so has part: feature:2169011-2169171:-1:exon
so has part: feature:2168564-2168650:-1:exon
so has part: feature:2168240-2168356:-1:exon
so has part: feature:2167120-2167271:-1:exon
so has part: feature:2166736-2166897:-1:exon
so has part: feature:2165705-2165782:-1:exon
so has part: feature:2164693-2164794:-1:exon
so has part: feature:2161811-2162049:-1:exon

XP_032048110.1
type: Protein
SIO_000068: ncbiprotein

position:2161811:-1
position: 2161811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2254896-2254935:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2254344-2254501:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2222875-2222937:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2213068-2213216:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2203107-2203213:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2195521-2195647:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2193193-2193337:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2191373-2191589:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2188203-2188352:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2186961-2187194:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2184577-2184726:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2183901-2184024:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2183023-2183140:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2181566-2181734:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2178953-2179095:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2178137-2178318:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2176313-2176423:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2172710-2172832:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2170659-2170758:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2170421-2170537:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2169011-2169171:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2168564-2168650:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2168240-2168356:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2167120-2167271:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2166736-2166897:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2165705-2165782:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2164693-2164794:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2161811-2162049:-1:exon

ROR1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: ROR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2315037..2465648)
location: region:2315037-2465648:-1
so has part: feature:2315037-2465648:-1:exon
subclass of: SO_0000010

116491978
type: Gene
SIO_000068: ncbigene

position:2315037:-1
position: 2315037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2465648:-1
position: 2465648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2315037-2465648:-1:exon

ROR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ROR1
product: receptor tyrosine kinase like orphan receptor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032192377.1
SIO_010081: ROR1
subclass of: SO_0000673
so part of: ROR1
location: complement(join(2315037..2317960,2321892..2322103,2325958..2326203,2326802..2327119,2327904..2328031,2352796..2352826,2354285..2354572,2366197..2366268,2465443..2465648))
location: region:2315037-2465648:-1
so has part: feature:2465443-2465648:-1:exon
so has part: feature:2366197-2366268:-1:exon
so has part: feature:2354285-2354572:-1:exon
so has part: feature:2352796-2352826:-1:exon
so has part: feature:2327904-2328031:-1:exon
so has part: feature:2326802-2327119:-1:exon
so has part: feature:2325958-2326203:-1:exon
so has part: feature:2321892-2322103:-1:exon
so has part: feature:2315037-2317960:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2465443-2465648:-1:exon

position:2465443:-1
position: 2465443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2366197-2366268:-1:exon

position:2366197:-1
position: 2366197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2366268:-1
position: 2366268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2354285-2354572:-1:exon

position:2354285:-1
position: 2354285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2354572:-1
position: 2354572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2352796-2352826:-1:exon

position:2352796:-1
position: 2352796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2352826:-1
position: 2352826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2327904-2328031:-1:exon

position:2327904:-1
position: 2327904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2328031:-1
position: 2328031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2326802-2327119:-1:exon

position:2326802:-1
position: 2326802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2327119:-1
position: 2327119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2325958-2326203:-1:exon

position:2325958:-1
position: 2325958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2326203:-1
position: 2326203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2321892-2322103:-1:exon

position:2321892:-1
position: 2321892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2322103:-1
position: 2322103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2315037-2317960:-1:exon

position:2317960:-1
position: 2317960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ROR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: ROR1
product: receptor tyrosine kinase like orphan receptor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032192378.1
SIO_010081: ROR1
subclass of: SO_0000673
so part of: ROR1
location: complement(join(2315037..2317960,2321892..2322103,2325958..2326203,2326802..2327119,2327904..2328031,2352796..2352826,2354285..2354572,2366197..2366268,2453235..2453262))
location: region:2315037-2453262:-1
so has part: feature:2453235-2453262:-1:exon
so has part: feature:2366197-2366268:-1:exon
so has part: feature:2354285-2354572:-1:exon
so has part: feature:2352796-2352826:-1:exon
so has part: feature:2327904-2328031:-1:exon
so has part: feature:2326802-2327119:-1:exon
so has part: feature:2325958-2326203:-1:exon
so has part: feature:2321892-2322103:-1:exon
so has part: feature:2315037-2317960:-1:exon

position:2453262:-1
position: 2453262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2453235-2453262:-1:exon

position:2453235:-1
position: 2453235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2366197-2366268:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2354285-2354572:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2352796-2352826:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2327904-2328031:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2326802-2327119:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2325958-2326203:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2321892-2322103:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2315037-2317960:-1:exon

ROR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: ROR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive tyrosine-protein kinase transmembrane receptor ROR1 isoform X1
translation: MQQPPRPGGGDGSLLLLPLLLLLRAGSRAELPDATQGANSSVVADFMPTSSWNISSELDKDYFLTLDEPMNNITTTLGQTAELHCKVSGNPPPTVRWLKNDAPVVQEPRRISFRATSYGSRLRIRNLDTTDTGYFQCVATNGRKTVSTTGVLFVKFGPPPTASPGSSDEYEEDGFCQPYRGIACARFIGNRTIYMESLHMQGEIENQITAAFTMIGTSSHLSDKCSQFAIPSLCHYAFPYCDETSPAPKPRDLCRDECEILENVLCQTEYIFARSNPMILMRLKLPNCEDLPQPDSPEAVNCIRIGIPMADPINKNHKCYNSTGVDYRGTVSVTRSGRQCQPWNSQYPHTHTFTAIRYPELNGGHSYCRNPGNQKDAPWCFTLDENFKSELCDVPACDSKDSKEKNKMEILYILVPSVTIPLAIALLFFFICICRNNQKSSSPPVQRQPKHVRGQNVEMSMLNAYKPKSKAKELPLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDFNNPQQWAEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYMNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAVQIAAGMEYLSSHFFVHKDLATRNILIGEQLHVKISDLGLSREIYSADYYRVQNKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMIRKRQLLPCSEDCPPRMYSLMTECWHDLPSRRPRFKEIHARLRSWEGLSSHTSSTTPSGGNATTQTTSLSASPVSNLSNPRYPNYMFPAQGIPQGQIAGFIGPPIPQNQRYIPINGYPIPPGYAAFPAAHYQPQGPPRVIQHCPPPKSRSPSSASGSTSTGHVTSLPSSGSNQEANIPLLSHMSIPSHPGGIGITVFGNKTQKPYKIDSKQSSLLGDSSIHGPNESMISAEL
SIO_010081: ROR1
subclass of: SO_0000673
so part of: ROR1
location: complement(join(2316536..2317960,2321892..2322103,2325958..2326203,2326802..2327119,2327904..2328031,2352796..2352826,2354285..2354572,2366197..2366268,2465443..2465551))
location: region:2316536-2465551:-1
so has part: feature:2465443-2465551:-1:exon
so has part: feature:2366197-2366268:-1:exon
so has part: feature:2354285-2354572:-1:exon
so has part: feature:2352796-2352826:-1:exon
so has part: feature:2327904-2328031:-1:exon
so has part: feature:2326802-2327119:-1:exon
so has part: feature:2325958-2326203:-1:exon
so has part: feature:2321892-2322103:-1:exon
so has part: feature:2316536-2317960:-1:exon

XP_032048268.1
type: Protein
SIO_000068: ncbiprotein

position:2316536:-1
position: 2316536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2465551:-1
position: 2465551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2465443-2465551:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2366197-2366268:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2354285-2354572:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2352796-2352826:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2327904-2328031:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2326802-2327119:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2325958-2326203:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2321892-2322103:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2316536-2317960:-1:exon

ROR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: ROR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive tyrosine-protein kinase transmembrane receptor ROR1 isoform X2
translation: MPTSSWNISSELDKDYFLTLDEPMNNITTTLGQTAELHCKVSGNPPPTVRWLKNDAPVVQEPRRISFRATSYGSRLRIRNLDTTDTGYFQCVATNGRKTVSTTGVLFVKFGPPPTASPGSSDEYEEDGFCQPYRGIACARFIGNRTIYMESLHMQGEIENQITAAFTMIGTSSHLSDKCSQFAIPSLCHYAFPYCDETSPAPKPRDLCRDECEILENVLCQTEYIFARSNPMILMRLKLPNCEDLPQPDSPEAVNCIRIGIPMADPINKNHKCYNSTGVDYRGTVSVTRSGRQCQPWNSQYPHTHTFTAIRYPELNGGHSYCRNPGNQKDAPWCFTLDENFKSELCDVPACDSKDSKEKNKMEILYILVPSVTIPLAIALLFFFICICRNNQKSSSPPVQRQPKHVRGQNVEMSMLNAYKPKSKAKELPLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDFNNPQQWAEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYMNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAVQIAAGMEYLSSHFFVHKDLATRNILIGEQLHVKISDLGLSREIYSADYYRVQNKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMIRKRQLLPCSEDCPPRMYSLMTECWHDLPSRRPRFKEIHARLRSWEGLSSHTSSTTPSGGNATTQTTSLSASPVSNLSNPRYPNYMFPAQGIPQGQIAGFIGPPIPQNQRYIPINGYPIPPGYAAFPAAHYQPQGPPRVIQHCPPPKSRSPSSASGSTSTGHVTSLPSSGSNQEANIPLLSHMSIPSHPGGIGITVFGNKTQKPYKIDSKQSSLLGDSSIHGPNESMISAEL
SIO_010081: ROR1
subclass of: SO_0000673
so part of: ROR1
location: complement(join(2316536..2317960,2321892..2322103,2325958..2326203,2326802..2327119,2327904..2328031,2352796..2352826,2354285..2354572,2366197..2366239))
location: region:2316536-2366239:-1
so has part: feature:2366197-2366239:-1:exon
so has part: feature:2354285-2354572:-1:exon
so has part: feature:2352796-2352826:-1:exon
so has part: feature:2327904-2328031:-1:exon
so has part: feature:2326802-2327119:-1:exon
so has part: feature:2325958-2326203:-1:exon
so has part: feature:2321892-2322103:-1:exon
so has part: feature:2316536-2317960:-1:exon

XP_032048269.1
type: Protein
SIO_000068: ncbiprotein

position:2366239:-1
position: 2366239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2366197-2366239:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2354285-2354572:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2352796-2352826:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2327904-2328031:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2326802-2327119:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2325958-2326203:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2321892-2322103:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2316536-2317960:-1:exon

PGM1
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: PGM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2481708..2502092)
location: region:2481708-2502092:-1
so has part: feature:2481708-2502092:-1:exon
subclass of: SO_0000010

116492112
type: Gene
SIO_000068: ncbigene

position:2481708:-1
position: 2481708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2502092:-1
position: 2502092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2481708-2502092:-1:exon

PGM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: PGM1
product: phosphoglucomutase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032192577.1
SIO_010081: PGM1
subclass of: SO_0000673
so part of: PGM1
location: complement(join(2481708..2482412,2483125..2483259,2483615..2483798,2485044..2485179,2487571..2487686,2488244..2488398,2488825..2489015,2489236..2489361,2490441..2490587,2490964..2491126,2501747..2502092))
location: region:2481708-2502092:-1
so has part: feature:2501747-2502092:-1:exon
so has part: feature:2490964-2491126:-1:exon
so has part: feature:2490441-2490587:-1:exon
so has part: feature:2489236-2489361:-1:exon
so has part: feature:2488825-2489015:-1:exon
so has part: feature:2488244-2488398:-1:exon
so has part: feature:2487571-2487686:-1:exon
so has part: feature:2485044-2485179:-1:exon
so has part: feature:2483615-2483798:-1:exon
so has part: feature:2483125-2483259:-1:exon
so has part: feature:2481708-2482412:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2501747-2502092:-1:exon

position:2501747:-1
position: 2501747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2490964-2491126:-1:exon

position:2490964:-1
position: 2490964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2491126:-1
position: 2491126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2490441-2490587:-1:exon

position:2490441:-1
position: 2490441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2490587:-1
position: 2490587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2489236-2489361:-1:exon

position:2489236:-1
position: 2489236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2489361:-1
position: 2489361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2488825-2489015:-1:exon

position:2488825:-1
position: 2488825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2489015:-1
position: 2489015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2488244-2488398:-1:exon

position:2488244:-1
position: 2488244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2488398:-1
position: 2488398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2487571-2487686:-1:exon

position:2487571:-1
position: 2487571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2487686:-1
position: 2487686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2485044-2485179:-1:exon

position:2485044:-1
position: 2485044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2485179:-1
position: 2485179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2483615-2483798:-1:exon

position:2483615:-1
position: 2483615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2483798:-1
position: 2483798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2483125-2483259:-1:exon

position:2483125:-1
position: 2483125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2483259:-1
position: 2483259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2481708-2482412:-1:exon

position:2482412:-1
position: 2482412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PGM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 219594
gene: PGM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoglucomutase-1
translation: MVRIVTVKTKAYGDQKPGTSGLRKRVSVFQSNAHYAENFIQSVLATLPPAERQEATLVVGGDGRYYMRDAIRLIVRIAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILTASHNPGGPNGDFGIKFNTANGGPAPEGVTDKIFQISKKIEEYAICPDLQVDLGTIGKQQFDLENKFKPFTVEIVDSVEAYANMLRNIFDFSALKELLSGKNHLKIRIDAMHGVVGPYVKKILCEELGAPANSAVNCTPLEDFGGHHPDPNLTYAADLVQTMKTGEYDFGAAFDGDGDRNMILGKHGFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVAHATKIALYETPTGWKFFGNLMDANKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQSVEDIMKDHWQKYGRNFFTRYDYEEVDADAANKMMKDLETMMFDRSFVGKQLSSGDKVYTVEKADNFEYNDPVDGSVSRNQGLRLIFSDGSRIIFRLSGTGSAGATVRLYIDSYEKDAQKIYEDPQVMLAPLISIALKLSQLHERTGRTGPTVIT
SIO_010081: PGM1
subclass of: SO_0000673
so part of: PGM1
location: complement(join(2482323..2482412,2483125..2483259,2483615..2483798,2485044..2485179,2487571..2487686,2488244..2488398,2488825..2489015,2489236..2489361,2490441..2490587,2490964..2491126,2501747..2501992))
location: region:2482323-2501992:-1
so has part: feature:2501747-2501992:-1:exon
so has part: feature:2490964-2491126:-1:exon
so has part: feature:2490441-2490587:-1:exon
so has part: feature:2489236-2489361:-1:exon
so has part: feature:2488825-2489015:-1:exon
so has part: feature:2488244-2488398:-1:exon
so has part: feature:2487571-2487686:-1:exon
so has part: feature:2485044-2485179:-1:exon
so has part: feature:2483615-2483798:-1:exon
so has part: feature:2483125-2483259:-1:exon
so has part: feature:2482323-2482412:-1:exon

XP_032048468.1
type: Protein
SIO_000068: ncbiprotein

position:2482323:-1
position: 2482323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2501992:-1
position: 2501992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2501747-2501992:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2490964-2491126:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2490441-2490587:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2489236-2489361:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2488825-2489015:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2488244-2488398:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2487571-2487686:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2485044-2485179:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2483615-2483798:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2483125-2483259:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2482323-2482412:-1:exon

EFCAB7
type: Gene
subclass of: SO_0000704
RO_0002162: 219594
gene: EFCAB7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2503429..2525840)
location: region:2503429-2525840:-1
so has part: feature:2503429-2525840:-1:exon
subclass of: SO_0000010

116492226
type: Gene
SIO_000068: ncbigene

position:2503429:-1
position: 2503429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2525840:-1
position: 2525840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2503429-2525840:-1:exon

EFCAB7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 219594
gene: EFCAB7
product: EF-hand calcium binding domain 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032192801.1
SIO_010081: EFCAB7
subclass of: SO_0000673
so part of: EFCAB7
location: complement(join(2503429..2504195,2505037..2505144,2507145..2507354,2509320..2509468,2511674..2511807,2511993..2512150,2513089..2513198,2513651..2513792,2517271..2517395,2518062..2518257,2518820..2518906,2520441..2520652,2523254..2523441,2525666..2525840))
location: region:2503429-2525840:-1
so has part: feature:2525666-2525840:-1:exon
so has part: feature:2523254-2523441:-1:exon
so has part: feature:2520441-2520652:-1:exon
so has part: feature:2518820-2518906:-1:exon
so has part: feature:2518062-2518257:-1:exon
so has part: feature:2517271-2517395:-1:exon
so has part: feature:2513651-2513792:-1:exon
so has part: feature:2513089-2513198:-1:exon
so has part: feature:2511993-2512150:-1:exon
so has part: feature:2511674-2511807:-1:exon
so has part: feature:2509320-2509468:-1:exon
so has part: feature:2507145-2507354:-1:exon
so has part: feature:2505037-2505144:-1:exon
so has part: feature:2503429-2504195:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2525666-2525840:-1:exon

position:2525666:-1
position: 2525666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2523254-2523441:-1:exon

position:2523254:-1
position: 2523254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2523441:-1
position: 2523441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2520441-2520652:-1:exon

position:2520441:-1
position: 2520441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2520652:-1
position: 2520652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2518820-2518906:-1:exon

position:2518820:-1
position: 2518820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2518906:-1
position: 2518906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2518062-2518257:-1:exon

position:2518062:-1
position: 2518062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2518257:-1
position: 2518257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2517271-2517395:-1:exon