Vagococcus carniphilus strain ATCC BAA-640 plasmid p_unnamed2, complete sequence.
type: Entry
definition: Vagococcus carniphilus strain ATCC BAA-640 plasmid p_unnamed2, complete sequence.
sequence version: NZ_CP060722.1
sequence date: 2023-05-06
sequence: sequence
division: CON
label: NZ_CP060722.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN15892503
keyword: RefSeq
source: Vagococcus carniphilus
organism: Vagococcus carniphilus
taxonomy: Bacteria; Bacillota; Bacilli; Lactobacillales; Enterococcaceae; Vagococcus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP060722.1.\nBacteria and source DNA available from ATCC BAA-640.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 3.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 330.0x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/06/2023 04:53:38\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,059\nCDSs (total) :: 2,951\nGenes (coding) :: 2,907\nCDSs (with protein) :: 2,907\nGenes (RNA) :: 108\nrRNAs :: 7, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 7, 7, 7 (5S, 16S, 23S)\ntRNAs :: 83\nncRNAs :: 4\nPseudo Genes (total) :: 44\nCDSs (without protein) :: 44\nPseudo Genes (ambiguous residues) :: 0 of 44\nPseudo Genes (frameshifted) :: 25 of 44\nPseudo Genes (incomplete) :: 20 of 44\nPseudo Genes (internal stop) :: 8 of 44\nPseudo Genes (multiple problems) :: 9 of 44\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 45823
topology: circular
so has quality: SO_0000988
location: 1..45823
location: region:1-45823:1
RO_0002162: 218144

NZ_CP060722
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN15892503
type: BioSample
SIO_000068: biosample

1
title: Genome sequence of Vagococcus carniphilus ATCC BAA-640T
author: Hyun, D.-W.
author: Bae, J.-W.
journal: Unpublished

2
title: Direct Submission
author: Hyun, D.-W.
author: Bae, J.-W.
journal: Submitted (26-AUG-2020) Department of Biology, Kyung Hee University, 1 Hoegi-dong, Dongdaemun-gu, Seoul 02447, South Korea

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45823:1
position: 45823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-45823:1:source
so part of: sequence
organism: Vagococcus carniphilus
mol type: genomic DNA
strain: ATCC BAA-640
isolation source: ground beef
culture collection: ATCC:BAA-640
type material: type strain of Vagococcus carniphilus
plasmid: p_unnamed2
country: USA
collection date: 2004-01-01

218144
type: Taxonomy
SIO_000068: taxonomy

H9L18_RS15030
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15030
old locus tag: H9L18_15030
so part of: sequence
location: join(45777..45823,1..283)
location: region:1-45823:1
so has part: feature:45777-45823:1:exon
so has part: feature:1-283:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:45777-45823:1:exon

position:45777:1
position: 45777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-283:1:exon

position:283:1
position: 283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

H9L18_RS15030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15030
old locus tag: H9L18_15030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012058465.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MEKNTHENCPVATTLNLLSNKWKILIIRELLDTTKRYGELKRNIQGVSEKMLSQSLKEMEQDKLIKRTVYAEVPPKVEYSLSEIGDTLRPIINSMKLWGVEYQEKISQN
SIO_010081: H9L18_RS15030
subclass of: SO_0000673
so part of: H9L18_RS15030
location: join(45777..45823,1..283)
location: region:1-45823:1
so has part: feature:45777-45823:1:exon
so has part: feature:1-283:1:exon

WP_086952659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45777-45823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-283:1:exon

H9L18_RS15035
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15035
old locus tag: H9L18_15035
so part of: sequence
location: 377..1000
location: region:377-1000:1
so has part: feature:377-1000:1:exon
subclass of: SO_0000010

position:377:1
position: 377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1000:1
position: 1000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377-1000:1:exon

H9L18_RS15035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15035
old locus tag: H9L18_15035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016174990.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1080 domain-containing protein
translation: MRESNLTVIGHKFVSNDVFMSAEKLDNQEVLKVIKDPVIDKEDEPTFAKLIDCEFHNGIIEVDVYSKLLSNAPEYARGFIGITFRIDESNDTFEGIYVRPTNGSAPVQLRRNRATQYFSYPDYKYDRLREEAPGEYESYVSIDIDEWIHMKIEVIDDKAKLFINNTKEPCLIVNDLKHGKNKKGSIGLWTDIGTKGYFKNLRINTTN
SIO_010081: H9L18_RS15035
subclass of: SO_0000673
so part of: H9L18_RS15035
location: 377..1000
location: region:377-1000:1
so has part: feature:377-1000:1:exon

WP_126796403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:377-1000:1:exon

H9L18_RS15040
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15040
old locus tag: H9L18_15040
so part of: sequence
location: 1279..1479
location: region:1279-1479:1
so has part: feature:1279-1479:1:exon
subclass of: SO_0000010

position:1279:1
position: 1279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1479:1
position: 1479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1279-1479:1:exon

H9L18_RS15040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15040
old locus tag: H9L18_15040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015543863.1
GO component: GO:0005829 - cytosol [Evidence IEA]
GO function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0001072 - transcription antitermination factor activity, RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cold-shock protein
translation: MANGTVKWFNAEKGFGFITQEDGTDVFAHFSAIQSDGFKTLDEGQAVTFEVEEGQRGLQATNIEKA
SIO_010081: H9L18_RS15040
subclass of: SO_0000673
so part of: H9L18_RS15040
location: 1279..1479
location: region:1279-1479:1
so has part: feature:1279-1479:1:exon

WP_125958505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1279-1479:1:exon

H9L18_RS15045
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15045
old locus tag: H9L18_15045
so part of: sequence
location: 1690..2037
location: region:1690-2037:1
so has part: feature:1690-2037:1:exon
subclass of: SO_0000010

position:1690:1
position: 1690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2037:1
position: 2037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1690-2037:1:exon

H9L18_RS15045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15045
old locus tag: H9L18_15045
inference: COORDINATES: protein motif:HMM:NF037417.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTIQNEIQNDRKKILRLLVEVHSQHIPLNDNHTIGDNKNCKICQIFIQLNESDNILREKLKLIQEDKNFIQDFNNLRRSLGRLPQEKEYKNKIEVIERFGSWNNFLNKTQNYFNR
SIO_010081: H9L18_RS15045
subclass of: SO_0000673
so part of: H9L18_RS15045
location: 1690..2037
location: region:1690-2037:1
so has part: feature:1690-2037:1:exon

WP_125958506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1690-2037:1:exon

H9L18_RS15050
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15050
old locus tag: H9L18_15050
so part of: sequence
location: complement(2196..3140)
location: region:2196-3140:-1
so has part: feature:2196-3140:-1:exon
subclass of: SO_0000010

position:2196:-1
position: 2196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3140:-1
position: 3140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2196-3140:-1:exon

H9L18_RS15050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15050
old locus tag: H9L18_15050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015426465.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N(5)-(carboxyethyl)ornithine synthase
translation: MKLGFIKSDFTNEQRVPLLPKDIKDFQNELYIETGFGESLNIPDQAYRDKNVTVLNRKDIFKTCDGIFSLKLIQPNDYPLIRNGQIIIGWTHPKGSGQSFMKNQAIPKELIVVDLDNIKPTVFFKNHEYPLNSIPSNFIYQNSFYAGYAGTIHALISYGFFPDEQTKIAVLGSGNVSQGSFHAISKFSSNVRLFYRKTMPLFKEQLGEFDIIINGIEVGENGRPIISKNEQKKLKNNCFIIDAAADAGNAIEGTHATNIESPIYNENGHTFYVVPNTPSIAYRNISKIISQQFSQHIYSKDISQFITITHTENN
SIO_010081: H9L18_RS15050
subclass of: SO_0000673
so part of: H9L18_RS15050
location: complement(2196..3140)
location: region:2196-3140:-1
so has part: feature:2196-3140:-1:exon

WP_126796405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2196-3140:-1:exon

H9L18_RS15055
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15055
old locus tag: H9L18_15055
so part of: sequence
location: 3457..3867
location: region:3457-3867:1
so has part: feature:3457-3867:1:exon
subclass of: SO_0000010

position:3457:1
position: 3457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3867:1
position: 3867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3457-3867:1:exon

H9L18_RS15055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15055
old locus tag: H9L18_15055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016173944.1
GO function: GO:0004601 - peroxidase activity [Evidence IEA]
GO process: GO:0006979 - response to oxidative stress [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ohr family peroxiredoxin
translation: MSNKMSISTVVNSGGREGESKSVTGFLDLKTSGQRKEGYTNPEELFAAGISACFNGALEFPLKRDGLADRNREIRAEVTLFGDLPDEHSLHLEVALIGKIEGLSKDDTMKYLKETESICPYTKAIKGNVNITLVAG
SIO_010081: H9L18_RS15055
subclass of: SO_0000673
so part of: H9L18_RS15055
location: 3457..3867
location: region:3457-3867:1
so has part: feature:3457-3867:1:exon

WP_125958508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3457-3867:1:exon

H9L18_RS15060
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15060
old locus tag: H9L18_15060
so part of: sequence
location: 4619..5053
location: region:4619-5053:1
so has part: feature:4619-5053:1:exon
subclass of: SO_0000010

position:4619:1
position: 4619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5053:1
position: 5053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4619-5053:1:exon

H9L18_RS15060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15060
old locus tag: H9L18_15060
inference: COORDINATES: protein motif:HMM:NF017353.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CsbD family protein
translation: MNKKQLIILGLGSVFGLAVLKKMNERTINKDSVKGKVKEVAGNITDNESLQVEGVVDQILGASKEVLEDVKDSISTVSNTVLSPGKVDRIKAGLQKSVGEMTNDKELETEGIVDEVLGTSKEVVSNAKESVNDAMKETKESLNK
SIO_010081: H9L18_RS15060
subclass of: SO_0000673
so part of: H9L18_RS15060
location: 4619..5053
location: region:4619-5053:1
so has part: feature:4619-5053:1:exon

WP_243638028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4619-5053:1:exon

H9L18_RS15065
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15065
old locus tag: H9L18_15065
so part of: sequence
location: 5171..5587
location: region:5171-5587:1
so has part: feature:5171-5587:1:exon
subclass of: SO_0000010

position:5171:1
position: 5171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5587:1
position: 5587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5171-5587:1:exon

H9L18_RS15065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15065
old locus tag: H9L18_15065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002320668.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTPase
translation: MKLSKSEHTIIHSATVAAGVVGASPIPFSDAALLVPIQTTMIVALYKRNGLTISQGVVKGLLKATLISGFGKSLAGNLFKFIPGVGTIAGGVINTGVAVTFTEFLGYAVAKELHGVEDIDMLDLTQVISNAVKTFSKI
SIO_010081: H9L18_RS15065
subclass of: SO_0000673
so part of: H9L18_RS15065
location: 5171..5587
location: region:5171-5587:1
so has part: feature:5171-5587:1:exon

WP_125958509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5171-5587:1:exon

H9L18_RS15070
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15070
old locus tag: H9L18_15070
so part of: sequence
location: complement(5880..6665)
location: region:5880-6665:-1
so has part: feature:5880-6665:-1:exon
subclass of: SO_0000010

position:5880:-1
position: 5880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6665:-1
position: 6665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5880-6665:-1:exon

H9L18_RS15070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15070
old locus tag: H9L18_15070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006532607.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tryptophan-rich sensory protein
translation: MVERKKAIGNFIILIGTLLINSLGASGQINNYSQKEVSDKFPTLITPNPGTFSIWGIIYMFLIVSIILMIIKSNDLQYKKIINAITLKFWIASLFNILWIISFSYLQLELSVLLIFGLLISLLSILKSIETFNTKKTLLLPITFGLYAGWIFVATIVNISATLVKLKWNRFYLSENFWASLTLIVAVILIYLITLKIKNAVFPLPIAWAFYGINNQLQSSNVLTNQHMILKYIALGGAVALIIIAIYQFYKNNYNLIPSVK
SIO_010081: H9L18_RS15070
subclass of: SO_0000673
so part of: H9L18_RS15070
location: complement(5880..6665)
location: region:5880-6665:-1
so has part: feature:5880-6665:-1:exon

WP_125958510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5880-6665:-1:exon

H9L18_RS15075
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15075
old locus tag: H9L18_15075
so part of: sequence
location: complement(7129..8130)
location: region:7129-8130:-1
so has part: feature:7129-8130:-1:exon
subclass of: SO_0000010

position:7129:-1
position: 7129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8130:-1
position: 8130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7129-8130:-1:exon

H9L18_RS15075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15075
old locus tag: H9L18_15075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002344895.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4062 domain-containing protein
translation: MKVINLIKVFIASPGDIAAKRNEVEETIYRWNIENTDNTKVILMPIRWETNAIPTYVNNSSGQSVINKQIVENSDILLAIFGHKLGSPVDNYRSGTIAEIDYFYKNSKGEVGIFFLDEPVPQILAEEYIEVKKYRDSLEDKGFYGTYSKDNIRRFLTKKVNHLIEKAQNNLESKRFDLDPISYKTSSAINKKVIGTDEYFEDNLDIFDPIEFDNDERLLLIYAFMDENSIFSTDNSTYRKVVQWESDNNLRSYLSDRVFDVLEKLSKSGILKEEYDSSFDEYPSRYILISEDYKKFKRYFLKNEKKISVIMEKYKAPIQADPFSNLDESDLPF
SIO_010081: H9L18_RS15075
subclass of: SO_0000673
so part of: H9L18_RS15075
location: complement(7129..8130)
location: region:7129-8130:-1
so has part: feature:7129-8130:-1:exon

WP_126796407.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7129-8130:-1:exon

H9L18_RS15080
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15080
old locus tag: H9L18_15080
so part of: sequence
location: complement(8289..8555)
location: region:8289-8555:-1
so has part: feature:8289-8555:-1:exon
subclass of: SO_0000010

position:8289:-1
position: 8289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8555:-1
position: 8555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8289-8555:-1:exon

H9L18_RS15080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15080
old locus tag: H9L18_15080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002344896.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MMIKKLIEEKKKDKDFAEAYDREGRKLETAVALYHAREEAGLTQAELAQKAHTTQSTIARIERGDNVSFDKLDDIARALGKKLVVEFA
SIO_010081: H9L18_RS15080
subclass of: SO_0000673
so part of: H9L18_RS15080
location: complement(8289..8555)
location: region:8289-8555:-1
so has part: feature:8289-8555:-1:exon

WP_002339787.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8289-8555:-1:exon

H9L18_RS15085
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15085
old locus tag: H9L18_15085
so part of: sequence
location: complement(8545..8901)
location: region:8545-8901:-1
so has part: feature:8545-8901:-1:exon
subclass of: SO_0000010

position:8545:-1
position: 8545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8901:-1
position: 8901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8545-8901:-1:exon

H9L18_RS15085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15085
old locus tag: H9L18_15085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002339788.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MEKISFETFKRPNGHDEFLEWLETLPKKDSAKLLRTIEETEKNGMLVAQRLKWVKKLDTNLYELRSKVGSNIQRAIYFHVDNGRYVITHGFTKKTEKTPITELKHAKELREEWFTNDD
SIO_010081: H9L18_RS15085
subclass of: SO_0000673
so part of: H9L18_RS15085
location: complement(8545..8901)
location: region:8545-8901:-1
so has part: feature:8545-8901:-1:exon

WP_002339788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8545-8901:-1:exon

H9L18_RS15090
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15090
old locus tag: H9L18_15090
so part of: sequence
location: complement(8984..9763)
location: region:8984-9763:-1
so has part: feature:8984-9763:-1:exon
subclass of: SO_0000010

position:8984:-1
position: 8984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9763:-1
position: 9763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8984-9763:-1:exon

H9L18_RS15090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15090
old locus tag: H9L18_15090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002396205.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: abortive infection family protein
translation: MMTIDEAKQLATYFSVGSAGYILDFTNVTWNIFTKKIVGIEIQNHYGGSKGVSFQKFLLDDQFDDSLKNRLIQSLKGIMDRDKKYESTEMNPIVQLLFEEVFKEDTSTALRKMKFSSEIDLLYIRQLPIRIQTDIKNKDFDSVLTKANTLIDEVLKFIIENTEGPSVNINLFKSKELRKEAFGRLNIKTEKDMDNRIKALVGALNTLSDKILEMRNSQGDAHAHGSNRIVIKEEEAILVANSSMVLCEYLFTKYKGLNR
SIO_010081: H9L18_RS15090
subclass of: SO_0000673
so part of: H9L18_RS15090
location: complement(8984..9763)
location: region:8984-9763:-1
so has part: feature:8984-9763:-1:exon

WP_002396205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8984-9763:-1:exon

H9L18_RS15095
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15095
old locus tag: H9L18_15095
so part of: sequence
location: complement(9777..10493)
location: region:9777-10493:-1
so has part: feature:9777-10493:-1:exon
subclass of: SO_0000010

position:9777:-1
position: 9777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10493:-1
position: 10493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9777-10493:-1:exon

H9L18_RS15095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15095
old locus tag: H9L18_15095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002340526.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MNEEKRPKFPDKYHLSRKESVYLLKKNIVELVYNAGKFEGLNTTLLQTGEIIKYNRANNVAVDDVLTVVNLKRGFEMLLNDLQEPLIETSKRINRIVAAEDALFPGEIRNGGVEVSTIQGRYVPALLTEDEVKNQYDKIMNQEISDTEKALRLFLFISKNQIFWNGNVGTALLIANKIMFSNGLGLLSIPENVFMKFNELLSKYCNSNLLVNESNIISFLYEQCIFGINYLKIIQHTI
SIO_010081: H9L18_RS15095
subclass of: SO_0000673
so part of: H9L18_RS15095
location: complement(9777..10493)
location: region:9777-10493:-1
so has part: feature:9777-10493:-1:exon

WP_108144707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9777-10493:-1:exon

H9L18_RS15100
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15100
old locus tag: H9L18_15100
so part of: sequence
location: complement(10542..11141)
location: region:10542-11141:-1
so has part: feature:10542-11141:-1:exon
subclass of: SO_0000010

position:10542:-1
position: 10542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11141:-1
position: 11141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10542-11141:-1:exon

H9L18_RS15100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15100
old locus tag: H9L18_15100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016627749.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MKSVEPIRDKKKIDAMKAILASGKYGQRNLVLFSIGINTAYRISDLRQLKLSDVVEISRGRVIVKERLAMKEQKTAKHNSVFISNKLRKVILDYVQSEFLEQLQVQDFSKYLFPSRKGADTPLTRQSLWRIIHEAGTAVGLKEIGPHSMRKTFGYFLYKQGTKTEIIQSLLNHSSQRETLRYIGITQEDKDTAVKSLDL
SIO_010081: H9L18_RS15100
subclass of: SO_0000673
so part of: H9L18_RS15100
location: complement(10542..11141)
location: region:10542-11141:-1
so has part: feature:10542-11141:-1:exon

WP_108144708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10542-11141:-1:exon

H9L18_RS15105
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15105
old locus tag: H9L18_15105
so part of: sequence
location: 11887..12846
location: region:11887-12846:1
so has part: feature:11887-12846:1:exon
subclass of: SO_0000010

position:11887:1
position: 11887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12846:1
position: 12846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11887-12846:1:exon

H9L18_RS15105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15105
old locus tag: H9L18_15105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000221326.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MTYKHLTIDELTMIESYYLQHKKPVEIANRMGRAIQTIYNVVNKFKQGKTALDYWHQYKENKKKCGRKVIQLPTHEVDYIKEKVTLGWTPDVIIGRQERPISCGMRTLYRLFSKGIFDSDTLPMKGKRKPNGHQEKRGKQQYQRSIHDRYDNYPDFNSEFGHLEGDTIVGIHHKSAVITLVERLSKVIITIKPNGRKALDIETALNQWFSRFPKNFFKSITFDCGKEFSNWKAISNQHDIDIYFADPGTPSQRPLNENSNGILRRNGLPKAMDFREVNQTFISSVSNQRNHIPRKSLNYRTPIEIFLSYVQEAFYSNLI
SIO_010081: H9L18_RS15105
subclass of: SO_0000673
so part of: H9L18_RS15105
location: 11887..12846
location: region:11887-12846:1
so has part: feature:11887-12846:1:exon

WP_126796409.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11887-12846:1:exon

H9L18_RS15110
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15110
old locus tag: H9L18_15110
so part of: sequence
location: complement(13336..14148)
location: region:13336-14148:-1
so has part: feature:13336-14148:-1:exon
subclass of: SO_0000010

position:13336:-1
position: 13336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14148:-1
position: 14148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13336-14148:-1:exon

H9L18_RS15110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15110
old locus tag: H9L18_15110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001032575.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MNKTPYFIETKEYKRFVEFCQACIKYKYIGICYGLPGVGKTLSAKQYSNWNWVEKQIDYKKSEEIGMNADEKILEAKTIFYTAPAIRATKMTNEIDMIGGKMGMVKSMYRVLQLGAEEKYSTNVYEEIDLIIIDEIDRLKVQHLEQLRDIYDQKDVAMIFIGMPGIEKRLARYPQLYSRIGFAHEFDRLSKDEIHHILEYKWEELGLSVQLEDFANYEAVTSIIKITSGNFRLIQRLFTQIERILEINNLETITTEVVEAARDSLVIGVK
SIO_010081: H9L18_RS15110
subclass of: SO_0000673
so part of: H9L18_RS15110
location: complement(13336..14148)
location: region:13336-14148:-1
so has part: feature:13336-14148:-1:exon

WP_002316690.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13336-14148:-1:exon

H9L18_RS15115
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15115
old locus tag: H9L18_15115
so part of: sequence
location: complement(14141..15589)
location: region:14141-15589:-1
so has part: feature:14141-15589:-1:exon
subclass of: SO_0000010

position:14141:-1
position: 14141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15589:-1
position: 15589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14141-15589:-1:exon

H9L18_RS15115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15115
old locus tag: H9L18_15115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001178744.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Mu transposase C-terminal domain-containing protein
translation: MNQELPPLTSYSEELRQNAMDKYQVIAPYLKHEESLSNIAEESGVPKRTLYHWVNQYQQSGLKGLIRRKRSDSGSFKVEENVQEEIKKLIFENKKNTLTSIHRKVCKICKKKNWAPPSYNQVYAIAKNLSPQLKELAHKGKKEYQNNYDLVYRRESYYPNEIWQADHTPLDILVLNEKGKPERPWLTIILDDYSRAVAGYFLSFQAPSAIQTSLVLHQAIWKKSNSDWQICGIPETFYTDHGSDFTSNHLEQVAIDLKINLIFSTVGMPRGRGKIERFFLTINQLFLQDLPGYIGNQNTLNLLTIKELDEKLAHFIIYDYHHRVHGTTKQEPIKMWNNSGFLPHQPDSLESLDLLLLNVGKPRKVHSDGIHFQGLRYIDTNLAAYVGETVIIRYDPRDIAEIRVFYKDQYLCTAISPEISDYEVDLKEIVAARNKARKNLENQLHSGNNIAEELISSKQKELDNPVNKKDSKKSKIKRYYNE
SIO_010081: H9L18_RS15115
subclass of: SO_0000673
so part of: H9L18_RS15115
location: complement(14141..15589)
location: region:14141-15589:-1
so has part: feature:14141-15589:-1:exon

WP_002316689.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14141-15589:-1:exon

H9L18_RS15120
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15120
old locus tag: H9L18_15120
so part of: sequence
location: complement(15635..16189)
location: region:15635-16189:-1
so has part: feature:15635-16189:-1:exon
subclass of: SO_0000010

position:15635:-1
position: 15635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16189:-1
position: 16189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15635-16189:-1:exon

H9L18_RS15120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15120
old locus tag: H9L18_15120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002316688.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MSGYIYGYARVSTRSQELSRQLDLLNEHNCNEILTEKMTGTKANRPQLNRLKDKLRPDDTVIVESFSRLGRSTKDLIDLVNYFEEHNVKLISLKENFDTVTPQGRLMMTVFQAFSQFERDLIVERTKEGLKSARARGRKGGRPPVNQRDIERAIKLYKSEEYSVKEIVEMTGISKSTLYRYLDK
SIO_010081: H9L18_RS15120
subclass of: SO_0000673
so part of: H9L18_RS15120
location: complement(15635..16189)
location: region:15635-16189:-1
so has part: feature:15635-16189:-1:exon

WP_002316688.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15635-16189:-1:exon

H9L18_RS15125
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15125
old locus tag: H9L18_15125
so part of: sequence
location: complement(16436..18379)
location: region:16436-18379:-1
so has part: feature:16436-18379:-1:exon
subclass of: SO_0000010

position:16436:-1
position: 16436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18379:-1
position: 18379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16436-18379:-1:exon

H9L18_RS15125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15125
old locus tag: H9L18_15125
EC number: 7.2.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002316687.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0019829 - ATPase-coupled monoatomic cation transmembrane transporter activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0015662 - P-type ion transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal translocating P-type ATPase
translation: METIEEQQSQEKHNHNHDHDHEHGKMPIVLYFIGLALAVIALFLNEDYQLMRNILFSIATISAGYHVIILEGLGETIENSKVQKKFMPNSHILMGLAAIGASLMGNFWEGTLLILIFSGAHFLEDYAEGRSKREITKLLEMNPTTARLIQPDGSTKNVDVSELKVGDQLQVLNGDQVPIDGVILSGSTSIDESSINGESIPKEKSKGDDVFGSTINGTGTFTMEVTKENKDTVFSKILQLVNQNQDNQTKAASIIQKFEPKYVTVVLIAIPLFMLLAPFLLDWTWSQSIYRGLVLLVAASPCALAAATVSATLSTTSNLAKKGVLSKGSSYLSQLADIKAIAFDKTGTLTKGKPEVTNYYFADSVNEENMIDIVVALEKESNHPLADAILRKFEQKNKLTIDVENQIGKGLTGDYKGRNYRIGKPTSFDDVSDEYSRLNNEWASEGKTVVYVAVDEEVLGLIALMDIPSEHAKATIEYFRKQGIHTTLITGDSEMTGKAVAKQLGIDEVIANVMPEDKSRIIDEQKEKYGVTAMVGDGVNDAPALVNADVGIAMGDGTDVAVEVSDLVLMQNNLSKLVQSHNISSKMNRVIWQNIIFSMAVVAFLIVVSFLGLTDIGISVIIHEGSTLVVILNGLRLLRSNSKPIKN
SIO_010081: H9L18_RS15125
subclass of: SO_0000673
so part of: H9L18_RS15125
location: complement(16436..18379)
location: region:16436-18379:-1
so has part: feature:16436-18379:-1:exon

WP_185847538.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16436-18379:-1:exon

H9L18_RS15130
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15130
old locus tag: H9L18_15130
so part of: sequence
location: 18738..19052
location: region:18738-19052:1
so has part: feature:18738-19052:1:exon
subclass of: SO_0000010

position:18738:1
position: 18738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19052:1
position: 19052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18738-19052:1:exon

H9L18_RS15130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15130
old locus tag: H9L18_15130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002316685.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloregulator ArsR/SmtB family transcription factor
translation: MDTSTSSPINKEKIQSISKLFKVISDPTRLSILFLLQKKELSVGNIVLALDMEQSAISHQLKILKDSHLVKARREGKSMVYSLDDLHVFSILEQVLTHINELEQ
SIO_010081: H9L18_RS15130
subclass of: SO_0000673
so part of: H9L18_RS15130
location: 18738..19052
location: region:18738-19052:1
so has part: feature:18738-19052:1:exon

WP_073294632.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18738-19052:1:exon

H9L18_RS15135
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15135
old locus tag: H9L18_15135
so part of: sequence
location: 19148..19999
location: region:19148-19999:1
so has part: feature:19148-19999:1:exon
subclass of: SO_0000010

position:19148:1
position: 19148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19999:1
position: 19999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19148-19999:1:exon

H9L18_RS15135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15135
old locus tag: H9L18_15135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002342451.1
GO function: GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation diffusion facilitator family transporter
translation: MKIAFFINFIFSMIEFFFGSLFNSVSIMSDAVHDLGDSISIGFAWFFQGYSEKQQDEQFTFGYNRFSLLGALITGVVLIGGSFFMIYRSIPRLIDPQPVNYSGMFWLSLVAIGLNGYAAWILSKGSSKNEGMLNLHMLEDVLGWIGVLVVSIVMNFTEAYRLDPILSILIALYILYKTVPEFFSTMKILLNGSPENVNVENLANSINNIPAVKDLSHFHIWSLDGEENALIVTVLIDSSDINKTREIKEEIAELAHTSGVKDHITIEITTSKDELEKGYAYGS
SIO_010081: H9L18_RS15135
subclass of: SO_0000673
so part of: H9L18_RS15135
location: 19148..19999
location: region:19148-19999:1
so has part: feature:19148-19999:1:exon

WP_246433345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19148-19999:1:exon

H9L18_RS15140
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15140
old locus tag: H9L18_15140
pseudo: true
so part of: sequence
location: complement(<20431..20647)
location: region:20431-20647:-1
so has part: feature:20431-20647:-1:exon
subclass of: SO_0000010

position:20431:-1
position: 20431
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:20647:-1
position: 20647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20431-20647:-1:exon

H9L18_RS15140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15140
old locus tag: H9L18_15140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002291321.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: PadR family transcriptional regulator
SIO_010081: H9L18_RS15140
subclass of: SO_0000673
so part of: H9L18_RS15140
location: complement(<20431..20647)
location: region:20431-20647:-1
so has part: feature:20431-20647:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20431-20647:-1:exon

H9L18_RS15470
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15470
pseudo: true
so part of: sequence
location: <20918..>21289
location: region:20918-21289:1
so has part: feature:20918-21289:1:exon
subclass of: SO_0000010

position:20918:1
position: 20918
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:21289:1
position: 21289
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20918-21289:1:exon

H9L18_RS15470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002297185.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: H9L18_RS15470
subclass of: SO_0000673
so part of: H9L18_RS15470
location: <20918..>21289
location: region:20918-21289:1
so has part: feature:20918-21289:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20918-21289:1:exon

H9L18_RS15145
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15145
old locus tag: H9L18_15145
so part of: sequence
location: complement(21268..22389)
location: region:21268-22389:-1
so has part: feature:21268-22389:-1:exon
subclass of: SO_0000010

position:21268:-1
position: 21268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22389:-1
position: 22389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21268-22389:-1:exon

H9L18_RS15145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15145
old locus tag: H9L18_15145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002291076.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class C sortase
translation: MKKNRQVISQIAIILIFMVGVLTMLYPFYVDALNNVIDQVRVDRYLKESQKEFEAERKRLAEENSKLSESGLAPGADPFANPNGGTVTAAYYKKHLIGTINLPDLAIELPLFDTTNDDLLEQGATVLDGTSFPVGGASTHAVISAHRGLPERELFTNLPELKNGDIFLLNVLGETLAYEVFDSQVVTPDQTSVLKIEPGQDLVTLMTCTPYMINSHRLLVTGKRVPYTPAAEKKQVKGDRFRKLKQIAILAGTALLILAAIYQLYHVIARYRLRKVRFDFTVCLEGVAEHTPIALYDKKGKKALRRNGKAYQELTDQTGQVTFTDLPGDCYRLKLGKSWLVQFGLKKKKRPSKIWKINKKKVMLKEERILEVK
SIO_010081: H9L18_RS15145
subclass of: SO_0000673
so part of: H9L18_RS15145
location: complement(21268..22389)
location: region:21268-22389:-1
so has part: feature:21268-22389:-1:exon

WP_010784089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21268-22389:-1:exon

H9L18_RS15150
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15150
old locus tag: H9L18_15150
so part of: sequence
location: complement(22386..23582)
location: region:22386-23582:-1
so has part: feature:22386-23582:-1:exon
subclass of: SO_0000010

position:22386:-1
position: 22386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23582:-1
position: 23582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22386-23582:-1:exon

H9L18_RS15150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15150
old locus tag: H9L18_15150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002291081.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class C sortase
translation: MDQRQKNERINLILKLLMAILFTTGAIIFSYPFLANAVNSYYDQKMMEKNLAEMAATNTKEQAKRHQEMAEKNKELAESKNMTNIPGMGLVEDPFENEVDDAKDPGKAYYKEHTVGAIYIPKISVSLPLFDETNAALLEKGATILQGTSYPIGGDSTHSVISGHSGLTERKLFTDLEKLVIGDDFYLTIAGKKLAYAVDDIQIVLPSDIDKVVIQPGRDLVTLLTCTPYGINTHRLLVTGHRVPYVEEMAEEVTSTKKAVERRFRLYLLLIPLFFAMIFYWMYRKFVYYQSGKHSYDFCFYLLENGQPKAGVTFTLVRKKRWATDVTNQPVAVSQVDGWVSFPEIRGGRYYAKAIDGSTKPVKGKVRRLKDRQFVLSRVTKKKQGKKVTYYLENGAKK
SIO_010081: H9L18_RS15150
subclass of: SO_0000673
so part of: H9L18_RS15150
location: complement(22386..23582)
location: region:22386-23582:-1
so has part: feature:22386-23582:-1:exon

WP_126796415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22386-23582:-1:exon

H9L18_RS15155
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15155
old locus tag: H9L18_15155
so part of: sequence
location: complement(23668..25155)
location: region:23668-25155:-1
so has part: feature:23668-25155:-1:exon
subclass of: SO_0000010

position:23668:-1
position: 23668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25155:-1
position: 25155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23668-25155:-1:exon

H9L18_RS15155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15155
old locus tag: H9L18_15155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002342352.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SpaH/EbpB family LPXTG-anchored major pilin
translation: MKKLWKTLFAALLVVPLFTGVFGAKTVSAAEATTTNVTINKRIWKDGEAPAQGSMQNTGEEMDFGGDPLEGAGFTAYDVTDAYLALIADGKSQAEATKEIADNASDYTTVAKAEQKTDANGQTTFEGLALKDGDKDKVYMFVETSTPGNVSVTTKAAPIVLAMPIYTFKDGKYSDTINTNVQVYPKNETKTDKKEVANLDKFTEVKGADGNVLYHNLTTGDEIEYKLTLNIPADILEDGVTYSVTDTPTAGLAYVKDSFAATGLVAGTDYELAEDSATGGFTVTLKQSENVGKLAGSQLIATYKMKLTAEVNPDDLVNNSAQVTIGNNPQDKITPPTQFGTGGYKFVKKDSQSGATLSGAEFVVKQGSNFAIFEDAKNTKGEYIFKEWTTDEAKATKIVSDDKGELKVIGLKNGDYQLEEKATSSDKYVLLDEDVDFTVEHGQYGSQELKSVLNTPKGLLPSTGGNGIYAFLLIGAALMIGAYAWFKKSKTQAEV
SIO_010081: H9L18_RS15155
subclass of: SO_0000673
so part of: H9L18_RS15155
location: complement(23668..25155)
location: region:23668-25155:-1
so has part: feature:23668-25155:-1:exon

WP_010826344.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23668-25155:-1:exon

H9L18_RS15160
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15160
old locus tag: H9L18_15160
so part of: sequence
location: complement(25220..25951)
location: region:25220-25951:-1
so has part: feature:25220-25951:-1:exon
subclass of: SO_0000010

position:25220:-1
position: 25220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25951:-1
position: 25951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25220-25951:-1:exon

H9L18_RS15160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15160
old locus tag: H9L18_15160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002291088.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pilin N-terminal domain-containing protein
translation: MKNKSLFIKITLLLSTLLVGIFTGQQAFADDGTIDIVIHKQLWDQAPDAAIQNTGAADQDIKDPIEGVGFTIYDITEDYYKLVKGSDETTTIQMIQENVADYQKIIREQGLTDEKGTIKFTQLPKSSGGKNAVYLIVETALPDPEKVKVEKAAEPLVVALPVYEMSTDGKTYTDKELATVHLYPKNVGTIVEKPVTPTKPKKPSKPKKRFPQTGEAKSFLGILGILLIGTAIILWRKHSVRNN
SIO_010081: H9L18_RS15160
subclass of: SO_0000673
so part of: H9L18_RS15160
location: complement(25220..25951)
location: region:25220-25951:-1
so has part: feature:25220-25951:-1:exon

WP_071130052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25220-25951:-1:exon

H9L18_RS15165
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15165
old locus tag: H9L18_15165
so part of: sequence
location: complement(25953..29612)
location: region:25953-29612:-1
so has part: feature:25953-29612:-1:exon
subclass of: SO_0000010

position:25953:-1
position: 25953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29612:-1
position: 29612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25953-29612:-1:exon

H9L18_RS15165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15165
old locus tag: H9L18_15165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002342351.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SpaA isopeptide-forming pilin-related protein
translation: MKKKKSVWFMMVAILMGFIPPILTAYSSIAQAIETQPDKIVDQSGLKVSSSVSSDGNSLNWKLQYEKDVASDGNDQALKFKVTADGEAIAFNEDASFATNDDQWFAEKDFSKQSQGSLSFTTVLNVSKVALEIQADATKTDETQAVTINKNILTSAVEGPHALKLPAVATQKTTEVSATSQTTAEETTSSQATETTTQTEEASEATSSEINASLATVGASKLEYLSGISAFSSINYSNIAPEYKTDATKGTYPTNSWQPAGQTNVINHQGNKERNFATWDGVTSWNGDPSDTTHSYIQYGEKQTDFAIRKYAKEASEPGLYDVYLNVKGNKQQDIKPVDIVLVVDMSGSMESSRSNGWNDRAGAARNGVKNFLQTIKDAGIGDYVKVGLVGFSSPGYVTGANGYLTVPIGKVSDTSHINAINDTLKPKFTGGTYTQIGIEQGQQMLAGSSNENKMMIVLTDGVPTFSKKVTAAQTIDGTTYATEFGNGLDEPGTTSKLNSSYAVGSWGNRTNIDSTWPATLGAAKIAKDAGLTIHTLGIQLSKDRDFLTEQQVRDRASLIATPGKYKDAETTDDVSDYLNEQAKNVVKSFNTIVNGSINDSLGDQFSYEGTPTVKSISTGNSAVTNLPTVNQSNGKVTTTELNLGKDQEIQIHYQVRINTEDKDFTPEKWYPMNGQTTLTPNGDNPDNKVDFGVPSAKAPGVKLDLKKIWEEYDKDTSKRPDSLDFTLNRKDTTESNSWKQGFIRLSKSDVATDTNVWEKTNIEKVAETQGATESLWLPQFNNKGKDFAYSFEEATVNGYESSSNAATTIWTNKKIYTPLALEITKISDQGKTPLKGAVFKLSGGSLPNAGVELKDNGDGTYTLSDDKYKLQLNTEYTLTEVTPPAGHTATTTSWKVNVSAEGKVTINDAVPGIEIKDNTIKYTIENEFTKRPLLVEKYNKDSGKTLDGAKFTLKQYGDKWTNDGEVVGDDLIGNDAKSFASLAPGYYSLEETKVPTGYKKDDTVFKFQIDSAGKLLDANGKEITANSKPTTDGFYLTSDNKIVLIKYNELRDFDFSILKKNSQSNKPLADTEFSLATKEDSNTILATLKTNDEGTGQFLDASGNHYGVRPGTYVIKETKAPEGFVLLEGTFEVTINADGTVGDVTYDGKDLDKDAIKVNLKDEDNNIIELTVANTPKGQLPATGGSGIQTFIIVALALVTAAGALTICYFYRNRKELN
SIO_010081: H9L18_RS15165
subclass of: SO_0000673
so part of: H9L18_RS15165
location: complement(25953..29612)
location: region:25953-29612:-1
so has part: feature:25953-29612:-1:exon

WP_126796417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25953-29612:-1:exon

H9L18_RS15475
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15475
so part of: sequence
location: 30430..30885
location: region:30430-30885:1
so has part: feature:30430-30885:1:exon
subclass of: SO_0000010

position:30430:1
position: 30430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30885:1
position: 30885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30430-30885:1:exon

H9L18_RS15475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15475
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTPLSIDQLQIVSQKLLAVDFNVMDSFNHFYKKYYPICLGNLSDCLMDLGYFEESKLILEKLAFVADHVDSIELKMWAQYLTNVLNIYMDDQLNEKQNRLNKLNKIVTNWHNLLPSSHLVEGLHGAFQPLSDRNVDRPNNIHIPPVYILKP
SIO_010081: H9L18_RS15475
subclass of: SO_0000673
so part of: H9L18_RS15475
location: 30430..30885
location: region:30430-30885:1
so has part: feature:30430-30885:1:exon

WP_243638027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30430-30885:1:exon

H9L18_RS15175
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15175
old locus tag: H9L18_15175
so part of: sequence
location: complement(30927..31241)
location: region:30927-31241:-1
so has part: feature:30927-31241:-1:exon
subclass of: SO_0000010

position:30927:-1
position: 30927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31241:-1
position: 31241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30927-31241:-1:exon

H9L18_RS15175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15175
old locus tag: H9L18_15175
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002337530.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIEEEIAELNRIKEWAVLLKIYYGILILSFITAGLFSFLLVLLSLWTNLMLFLSLLLVFFLGVGGVGTAILDDYKWSLFSGICRRMKKSATVESYECWKKEMNV
SIO_010081: H9L18_RS15175
subclass of: SO_0000673
so part of: H9L18_RS15175
location: complement(30927..31241)
location: region:30927-31241:-1
so has part: feature:30927-31241:-1:exon

WP_126796420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30927-31241:-1:exon

H9L18_RS15180
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15180
old locus tag: H9L18_15180
so part of: sequence
location: complement(31245..31532)
location: region:31245-31532:-1
so has part: feature:31245-31532:-1:exon
subclass of: SO_0000010

position:31245:-1
position: 31245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31532:-1
position: 31532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31245-31532:-1:exon

H9L18_RS15180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15180
old locus tag: H9L18_15180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002333827.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system protein PrgN
translation: MSINTFVYPYPINVFIISRLGMTVEQFCEIHGYKQSTVASWVTRNRTVKTLPCDFLYCLSLSSGWSMDDVYRHLLVLEEKFLKSIDPKKKKEQVD
SIO_010081: H9L18_RS15180
subclass of: SO_0000673
so part of: H9L18_RS15180
location: complement(31245..31532)
location: region:31245-31532:-1
so has part: feature:31245-31532:-1:exon

WP_126796422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31245-31532:-1:exon

H9L18_RS15185
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15185
old locus tag: H9L18_15185
so part of: sequence
location: complement(31668..33167)
location: region:31668-33167:-1
so has part: feature:31668-33167:-1:exon
subclass of: SO_0000010

position:31668:-1
position: 31668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33167:-1
position: 33167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31668-33167:-1:exon

H9L18_RS15185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15185
old locus tag: H9L18_15185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010782321.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: primase C-terminal domain-containing protein
translation: MAASLDVVYSTVLQNGIRKFKYKNSHLKPVSFSDQSGKGAIFAYRSKEHMIEGIGLVITSEEGVIENNNRFTHWTPNVFRYGTYADEARMFTKGHSEDNLRQINTFFVDFDTLDPNFDYGEIILASHEIGFMPTMILRTPHGFQAFYVLDKPAYVTKKSNFKVINVAKMISKNLRNKFSNDYRFPVDVNANHFGITRMPSEENVLFFEPQYCYSFEEWIDWSMREDADKKAEIKNVFVLPSTQEFRQVDEPWFQLLLKSQKIQGEKGVYGRNNVIFTLSLAYFSSGYEVEACELTMLEFNDRLANPLSDRELTRIIRSAYSGKYQAAHREKIVLLCQEWVDANLSEEQLFNKKRGWWKFKKERAVRKYSHSHEWAEDLLSYLNEQSYEEQPYIISTKKELTERLKIPKRSLDKVLKQLREENKIHFRVRAGRNGGIMLASIHGLMRFVIRLKKESRGAYFAAISEAFGKEYTFIQTALKRLIDPNKIGVQTDLFMIDTG
SIO_010081: H9L18_RS15185
subclass of: SO_0000673
so part of: H9L18_RS15185
location: complement(31668..33167)
location: region:31668-33167:-1
so has part: feature:31668-33167:-1:exon

WP_126796424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31668-33167:-1:exon

H9L18_RS15190
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15190
old locus tag: H9L18_15190
so part of: sequence
location: complement(33536..33862)
location: region:33536-33862:-1
so has part: feature:33536-33862:-1:exon
subclass of: SO_0000010

position:33536:-1
position: 33536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33862:-1
position: 33862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33536-33862:-1:exon

H9L18_RS15190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15190
old locus tag: H9L18_15190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002300090.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XRE family transcriptional regulator
translation: MKKNSKEFRNEYDRFVLKFLIDNYYISRIDLSKAIGLAPSYVREFYNGSRSFGNEALEKLESTIFNLYKPLLENHSFELNQVQEMIESIDSEEELELFRHKGANVLDI
SIO_010081: H9L18_RS15190
subclass of: SO_0000673
so part of: H9L18_RS15190
location: complement(33536..33862)
location: region:33536-33862:-1
so has part: feature:33536-33862:-1:exon

WP_126796426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33536-33862:-1:exon

H9L18_RS15195
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15195
old locus tag: H9L18_15195
so part of: sequence
location: 34249..35214
location: region:34249-35214:1
so has part: feature:34249-35214:1:exon
subclass of: SO_0000010

position:34249:1
position: 34249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35214:1
position: 35214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34249-35214:1:exon

H9L18_RS15195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15195
old locus tag: H9L18_15195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002300091.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MAVVLTVAANKGGVGKTLITINLAGAIRRSFPEAKILVVDTDAQGNSTKSFRVKVAKDQNTIYDVFMDNATVEETIVQTYDDHIDVLPANSDNNYLEFDKMEQFRDTILEWFVSLLKKFKDNLTEIMTVSGLKKKMNNIIDPSANYFNALDGKFDNVSDKYDYIIFDTPPELKQVTSSVLSIADVVIVPYEPDLNGVDGVTHLISRVNTLKEKYNPNLRIGGVLANKVYNTNLHAKMINAMMKYTNRNNYHYFDSELPRSITFADKLVRNGMPITMSSPENKFAQHFYKLIIEMNKLGLLSKNGKELEIPHKLYVESDGEE
SIO_010081: H9L18_RS15195
subclass of: SO_0000673
so part of: H9L18_RS15195
location: 34249..35214
location: region:34249-35214:1
so has part: feature:34249-35214:1:exon

WP_002300091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34249-35214:1:exon

H9L18_RS15200
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15200
old locus tag: H9L18_15200
so part of: sequence
location: 35214..35678
location: region:35214-35678:1
so has part: feature:35214-35678:1:exon
subclass of: SO_0000010

position:35678:1
position: 35678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35214-35678:1:exon

H9L18_RS15200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15200
old locus tag: H9L18_15200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002300092.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPRINRKKPTGDFESVFDEELEELETPNDTIDSIPETEVTVSNSFPSDKETITENFNEANRFGLSKTSKSTSSELVARTFKYKKETIQRVESLVYKDQRHSKKIPGTKGFISDFMDNAIWQHLLQLGLATEEEVQKHLNSYSKYPLNFDNYEKK
SIO_010081: H9L18_RS15200
subclass of: SO_0000673
so part of: H9L18_RS15200
location: 35214..35678
location: region:35214-35678:1
so has part: feature:35214-35678:1:exon

WP_029486099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35214-35678:1:exon

H9L18_RS15205
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15205
old locus tag: H9L18_15205
pseudo: true
so part of: sequence
location: 36051..>36925
location: region:36051-36925:1
so has part: feature:36051-36925:1:exon
subclass of: SO_0000010

position:36051:1
position: 36051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36925:1
position: 36925
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36051-36925:1:exon

H9L18_RS15205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15205
old locus tag: H9L18_15205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005237742.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Y-family DNA polymerase
SIO_010081: H9L18_RS15205
subclass of: SO_0000673
so part of: H9L18_RS15205
location: 36051..>36925
location: region:36051-36925:1
so has part: feature:36051-36925:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36051-36925:1:exon

H9L18_RS15210
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15210
old locus tag: H9L18_15210
so part of: sequence
location: complement(36951..37631)
location: region:36951-37631:-1
so has part: feature:36951-37631:-1:exon
subclass of: SO_0000010

position:36951:-1
position: 36951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37631:-1
position: 37631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36951-37631:-1:exon

H9L18_RS15210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15210
old locus tag: H9L18_15210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_064305258.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6-like element IS1216 family transposase
translation: MNHFKEKQFQQDVIIVAVGYYLRYNLSYREVQEILYDRGINVSHTTIYRWVQEYGKLLYQIWKKKNKKSFYSWKMDETYIKIKGKWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKRLVKQFDEPKVVVTDKAPSITSAFKKLKEYGFYQGTEHRTIKYLNNLIEQDHRPVKRRNKFYRSLRTASTTIKCMGAIRGLYKKTRKEGTLFGFSVCTEIKVLLGISA
SIO_010081: H9L18_RS15210
subclass of: SO_0000673
so part of: H9L18_RS15210
location: complement(36951..37631)
location: region:36951-37631:-1
so has part: feature:36951-37631:-1:exon

WP_187559367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36951-37631:-1:exon

H9L18_RS15215
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15215
old locus tag: H9L18_15215
so part of: sequence
location: complement(37738..37986)
location: region:37738-37986:-1
so has part: feature:37738-37986:-1:exon
subclass of: SO_0000010

position:37738:-1
position: 37738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37986:-1
position: 37986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37738-37986:-1:exon

H9L18_RS15215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15215
old locus tag: H9L18_15215
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKYPKLLQRLETLEMVTYFHDDNAEDMYRNIMQIVATAKPQTKEQEHQIIYDTLYLLETMHYEPLLDEPLSEFKVEEREPNN
SIO_010081: H9L18_RS15215
subclass of: SO_0000673
so part of: H9L18_RS15215
location: complement(37738..37986)
location: region:37738-37986:-1
so has part: feature:37738-37986:-1:exon

WP_126796638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37738-37986:-1:exon

H9L18_RS15220
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15220
old locus tag: H9L18_15220
so part of: sequence
location: complement(38046..38495)
location: region:38046-38495:-1
so has part: feature:38046-38495:-1:exon
subclass of: SO_0000010

position:38046:-1
position: 38046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38495:-1
position: 38495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38046-38495:-1:exon

H9L18_RS15220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15220
old locus tag: H9L18_15220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016621817.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: JAB domain-containing protein
translation: MSVSYEKVVEIVRLKQVVCDSTLEIQKITSSFGIAQWLMDEIGNETQEVLMLLCLNTKNKVNSLSVVHRGTINQSIAHPRDIFQRAILSNATRICIAHNHPSGNPQPSEADKLFTERIKEAGNLLGIFLLDHLVVTSNRYYSFRENGGL
SIO_010081: H9L18_RS15220
subclass of: SO_0000673
so part of: H9L18_RS15220
location: complement(38046..38495)
location: region:38046-38495:-1
so has part: feature:38046-38495:-1:exon

WP_126796640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38046-38495:-1:exon

H9L18_RS15225
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15225
old locus tag: H9L18_15225
so part of: sequence
location: 38918..39127
location: region:38918-39127:1
so has part: feature:38918-39127:1:exon
subclass of: SO_0000010

position:38918:1
position: 38918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39127:1
position: 39127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38918-39127:1:exon

H9L18_RS15225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15225
old locus tag: H9L18_15225
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYFKNNCGHVFVDGSKVIVETGTFKRITEFYSIFNSSIQMEFNDSIVELEIYSNVNKLADALLKEYGVD
SIO_010081: H9L18_RS15225
subclass of: SO_0000673
so part of: H9L18_RS15225
location: 38918..39127
location: region:38918-39127:1
so has part: feature:38918-39127:1:exon

WP_126796642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38918-39127:1:exon

H9L18_RS15230
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15230
old locus tag: H9L18_15230
pseudo: true
so part of: sequence
location: 39564..40561
location: region:39564-40561:1
so has part: feature:39564-40561:1:exon
subclass of: SO_0000010

position:39564:1
position: 39564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40561:1
position: 40561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39564-40561:1:exon

H9L18_RS15230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15230
old locus tag: H9L18_15230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007207926.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS30 family transposase
SIO_010081: H9L18_RS15230
subclass of: SO_0000673
so part of: H9L18_RS15230
location: 39564..40561
location: region:39564-40561:1
so has part: feature:39564-40561:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39564-40561:1:exon

H9L18_RS15235
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15235
old locus tag: H9L18_15235
so part of: sequence
location: complement(40558..41727)
location: region:40558-41727:-1
so has part: feature:40558-41727:-1:exon
subclass of: SO_0000010

position:40558:-1
position: 40558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41727:-1
position: 41727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40558-41727:-1:exon

H9L18_RS15235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15235
old locus tag: H9L18_15235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002287843.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256 family transposase
translation: MTNFTTEIMETLINKGDLDDLFRRHLELAINTLLQAELTAFLDYEKYDRTGFNSGNSRNGNYSRSFKTEYGELNLAIPRDRNGEFSQQTLPAYKRSNDSLETTIIQLFQKGITMSEISELIEKMYGHYYTPQTISNITQIVSEDVVAFKERSLESQYSIIFMDATHIPLKRQTVSKEAVYIVIGIRLDGTKEVLGFSIAPTESSYVWKEILQDLKDRGLEEVLLVVTDGLSGIDDSIHSIYPNAQFQQCCVHISRNIAHKVRVSDRQEVCNDFKLVYQAASKEEAMNQISFMIDKWKKQYPRVVKLLMNPAILTFYNFPPSIRRTIYSTNLIEGFNKQLKKYTKRKEQFPNEESLERFLVSQFNNYNQKFLCRIHKGFKEIQDTLESMF
SIO_010081: H9L18_RS15235
subclass of: SO_0000673
so part of: H9L18_RS15235
location: complement(40558..41727)
location: region:40558-41727:-1
so has part: feature:40558-41727:-1:exon

WP_104859673.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40558-41727:-1:exon

H9L18_RS15240
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15240
old locus tag: H9L18_15240
so part of: sequence
location: complement(42132..42326)
location: region:42132-42326:-1
so has part: feature:42132-42326:-1:exon
subclass of: SO_0000010

position:42132:-1
position: 42132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42326:-1
position: 42326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42132-42326:-1:exon

H9L18_RS15240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15240
old locus tag: H9L18_15240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002399460.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CsbD family protein
translation: MTDKGYTDKIKGKTKETVGDLRGDDKQKAEGILDQAIGKTKEVTSDIKEKAEDFIDETKDKLNK
SIO_010081: H9L18_RS15240
subclass of: SO_0000673
so part of: H9L18_RS15240
location: complement(42132..42326)
location: region:42132-42326:-1
so has part: feature:42132-42326:-1:exon

WP_125958561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42132-42326:-1:exon

H9L18_RS15245
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15245
old locus tag: H9L18_15245
so part of: sequence
location: complement(42356..42601)
location: region:42356-42601:-1
so has part: feature:42356-42601:-1:exon
subclass of: SO_0000010

position:42356:-1
position: 42356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42601:-1
position: 42601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42356-42601:-1:exon

H9L18_RS15245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15245
old locus tag: H9L18_15245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014939776.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GlsB/YeaQ/YmgE family stress response membrane protein
translation: MGFIWSLIIGGVIGAIAGAITSKGKSMGWIANIIAGLIGSSIGQSLFGSFGPSLAGMALIPSILGAVIVVAVVSLFTGKKS
SIO_010081: H9L18_RS15245
subclass of: SO_0000673
so part of: H9L18_RS15245
location: complement(42356..42601)
location: region:42356-42601:-1
so has part: feature:42356-42601:-1:exon

WP_125958562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42356-42601:-1:exon

H9L18_RS15250
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15250
old locus tag: H9L18_15250
so part of: sequence
location: complement(42630..43160)
location: region:42630-43160:-1
so has part: feature:42630-43160:-1:exon
subclass of: SO_0000010

position:42630:-1
position: 42630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43160:-1
position: 43160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42630-43160:-1:exon

H9L18_RS15250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15250
old locus tag: H9L18_15250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016634928.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Asp23/Gls24 family envelope stress response protein
translation: MENKGTQVEVKKSELKGELTFEDKVIQKIVGISLETIPGLLTINGGFFSNLADKIVNNNDVTSGIDVEVGKKEVAVDLDIVAEYGVDISKIYEDIKRVIEKEVKHMTSLEVIEVNVNVVDIKTKEQYEEDSVTVQDKLSGATSEVSDIVSDQTDKVKKVSSKGATKVKEATEPRVE
SIO_010081: H9L18_RS15250
subclass of: SO_0000673
so part of: H9L18_RS15250
location: complement(42630..43160)
location: region:42630-43160:-1
so has part: feature:42630-43160:-1:exon

WP_125958563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42630-43160:-1:exon

H9L18_RS15255
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15255
old locus tag: H9L18_15255
so part of: sequence
location: complement(43195..43371)
location: region:43195-43371:-1
so has part: feature:43195-43371:-1:exon
subclass of: SO_0000010

position:43195:-1
position: 43195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43371:-1
position: 43371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43195-43371:-1:exon

H9L18_RS15255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15255
old locus tag: H9L18_15255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016185123.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2273 domain-containing protein
translation: MEDFIKKYRFPILGALIGLGLAISFFSLGFFKTIILIILTLLGACIGYYLQKNNFLKK
SIO_010081: H9L18_RS15255
subclass of: SO_0000673
so part of: H9L18_RS15255
location: complement(43195..43371)
location: region:43195-43371:-1
so has part: feature:43195-43371:-1:exon

WP_125958564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43195-43371:-1:exon

H9L18_RS15260
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
gene: amaP
locus tag: H9L18_RS15260
old locus tag: H9L18_15260
so part of: sequence
location: complement(43385..43945)
location: region:43385-43945:-1
so has part: feature:43385-43945:-1:exon
subclass of: SO_0000010

position:43385:-1
position: 43385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43945:-1
position: 43945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43385-43945:-1:exon

H9L18_RS15260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
gene: amaP
locus tag: H9L18_RS15260
old locus tag: H9L18_15260
inference: COORDINATES: protein motif:HMM:NF033218.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alkaline shock response membrane anchor protein AmaP
translation: MYRYKKVLILISILLLIPLLFTNVIQNQYLANFSFELIKMENYPFVGSYIPFYLFWGSILVIIFLIILFFFILLYPRNKTEIYFSKSKGSLSIKKNAVEQFVSTILTQEPWLKNSKVSVTMKKNRIKIFISGSCSNNETNLLDKINELSLRIKQELSIFLGITDSKQVSVEIKQVSNKKANNSRVI
SIO_010081: H9L18_RS15260
subclass of: SO_0000673
so part of: H9L18_RS15260
location: complement(43385..43945)
location: region:43385-43945:-1
so has part: feature:43385-43945:-1:exon

WP_135024353.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43385-43945:-1:exon

H9L18_RS15265
type: Gene
subclass of: SO_0000704
RO_0002162: 218144
locus tag: H9L18_RS15265
old locus tag: H9L18_15265
so part of: sequence
location: complement(44070..45239)
location: region:44070-45239:-1
so has part: feature:44070-45239:-1:exon
subclass of: SO_0000010

position:44070:-1
position: 44070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45239:-1
position: 45239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44070-45239:-1:exon

H9L18_RS15265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 218144
locus tag: H9L18_RS15265
old locus tag: H9L18_15265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002287843.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256 family transposase
translation: MTNFTTEIMETLINKGDLDDLFRRHLELAINTLLQAELTAFLDYEKYDRTGFNSGNSRNGNYSRSFKTEYGELNLAIPRDRNGEFSQQTLPAYKRSNDSLETTIIQLFQKGITMSEISELIEKMYGHYYTPQTISNITQIVSEDVVAFKERSLESQYSIIFMDATHIPLKRQTVSKEAVYIVIGIRLDGTKEVLGFSIAPTESSYVWKEILQDLKDRGLEEVLLVVTDGLSGIDDSIHSIYPNAQFQQCCVHISRNIAHKVRVSDRQEVCNDFKLVYQAASKEEAMNQISFMIDKWKKQYPRVVKLLMNPAILTFYNFPPSIRRTIYSTNLIEGFNKQLKKYTKRKEQFPNEESLERFLVSQFNNYNQKFLCRIHKGFKEIQDTLESMF
SIO_010081: H9L18_RS15265
subclass of: SO_0000673
so part of: H9L18_RS15265
location: complement(44070..45239)
location: region:44070-45239:-1
so has part: feature:44070-45239:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:44070-45239:-1:exon