Wolbachia endosymbiont of Corcyra cephalonica isolate SYLI2103 plasmid unnamed1, complete sequence.
Wolbachia endosymbiont of Corcyra cephalonica
Bacteria; Pseudomonadota; Alphaproteobacteria; Rickettsiales; Anaplasmataceae; Wolbachieae; Wolbachia.
Genomic analysis of the wCcep Wolbachia strain from Corcyra cephalonica reveals insights into its unique cytoplasmic incompatibility-inducing mechanism
Submitted (15-NOV-2021) College of Plant Protection, China Agricultural University, yuanmingyuanxilu, bejing, haidianqu 100193, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP087955.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: FALCON v. v0.3.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 923.0x\nSequencing Technology :: Illumina NovaSeq; PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 08/07/2023 02:55:24\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,319\nCDSs (total) :: 1,278\nGenes (coding) :: 1,206\nCDSs (with protein) :: 1,206\nGenes (RNA) :: 41\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 34\nncRNAs :: 4\nPseudo Genes (total) :: 72\nCDSs (without protein) :: 72\nPseudo Genes (ambiguous residues) :: 0 of 72\nPseudo Genes (frameshifted) :: 44 of 72\nPseudo Genes (incomplete) :: 44 of 72\nPseudo Genes (internal stop) :: 15 of 72\nPseudo Genes (multiple problems) :: 26 of 72\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF012581.2
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
proton-conducting transporter membrane subunit
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.